BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014736
(419 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 180/305 (59%), Gaps = 12/305 (3%)
Query: 79 YDFQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH 138
Y L +L T NF +L+G G FG V+KG LR G K VA+K E QG
Sbjct: 27 YRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGV----LRDGAK---VALKRRTPESSQGI 79
Query: 139 REWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRI--SVSLPWG 196
E+ E+ L RHPHLV LIG+C E E +L+Y++M G+L+ HL+ ++S+ W
Sbjct: 80 EEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWE 139
Query: 197 TRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHV 256
RL+I IGAA+GL +LH +I+RD K+ NILLD +F K++DFG++K G E TH+
Sbjct: 140 QRLEICIGAARGLHYLH--TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHL 197
Query: 257 TTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAK 316
V GT GY PEY G LT KSDVYSFGVVL E+L R ++ + P+ NL +WA
Sbjct: 198 XXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257
Query: 317 PYLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLNL 376
++ +L IVDP LA + + ++ A++C++++ +DRP M V+ LE L L
Sbjct: 258 ES-HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316
Query: 377 KDMAV 381
++ +
Sbjct: 317 QESVI 321
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 216 bits (549), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 180/305 (59%), Gaps = 12/305 (3%)
Query: 79 YDFQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH 138
Y L +L T NF +L+G G FG V+KG LR G K VA+K E QG
Sbjct: 27 YRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGV----LRDGAK---VALKRRTPESSQGI 79
Query: 139 REWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRI--SVSLPWG 196
E+ E+ L RHPHLV LIG+C E E +L+Y++M G+L+ HL+ ++S+ W
Sbjct: 80 EEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWE 139
Query: 197 TRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHV 256
RL+I IGAA+GL +LH +I+RD K+ NILLD +F K++DFG++K G E TH+
Sbjct: 140 QRLEICIGAARGLHYLH--TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHL 197
Query: 257 TTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAK 316
V GT GY PEY G LT KSDVYSFGVVL E+L R ++ + P+ NL +WA
Sbjct: 198 XXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV 257
Query: 317 PYLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLNL 376
++ +L IVDP LA + + ++ A++C++++ +DRP M V+ LE L L
Sbjct: 258 ES-HNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316
Query: 377 KDMAV 381
++ +
Sbjct: 317 QESVI 321
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 209 bits (531), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 124/297 (41%), Positives = 180/297 (60%), Gaps = 15/297 (5%)
Query: 81 FQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQG-HR 139
F L EL+ + NFS+ +LG GGFG V+KG + D VAVK L E QG
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLAD-------GTLVAVKRLKEERXQGGEL 80
Query: 140 EWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLP--WGT 197
++ EV + H +L+RL G+C ERLLVY +M GS+ + L +R P W
Sbjct: 81 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPK 140
Query: 198 RLKIAIGAAKGLAFLHGAENP-VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHV 256
R +IA+G+A+GLA+LH +P +I+RD K +NILLD +F A + DFGLAK+ + + HV
Sbjct: 141 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-MDYKDXHV 199
Query: 257 TTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQN--LVDW 314
V GT G+ APEY+STG + K+DV+ +GV+LLEL+TG+R+ D R ++ + L+DW
Sbjct: 200 XXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 259
Query: 315 AKPYLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLE 371
K L+ ++L +VD L G Y + +++ +AL C +P +RPKM+ VV LE
Sbjct: 260 VKGLLK-EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 205 bits (521), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 122/297 (41%), Positives = 178/297 (59%), Gaps = 15/297 (5%)
Query: 81 FQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQG-HR 139
F L EL+ + NF + +LG GGFG V+KG + D VAVK L E QG
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLAD-------GXLVAVKRLKEERTQGGEL 72
Query: 140 EWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLP--WGT 197
++ EV + H +L+RL G+C ERLLVY +M GS+ + L +R P W
Sbjct: 73 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPK 132
Query: 198 RLKIAIGAAKGLAFLHGAENP-VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHV 256
R +IA+G+A+GLA+LH +P +I+RD K +NILLD +F A + DFGLAK+ + + HV
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-MDYKDXHV 191
Query: 257 TTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQN--LVDW 314
V G G+ APEY+STG + K+DV+ +GV+LLEL+TG+R+ D R ++ + L+DW
Sbjct: 192 XXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 251
Query: 315 AKPYLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLE 371
K L+ ++L +VD L G Y + +++ +AL C +P +RPKM+ VV LE
Sbjct: 252 VKGLLK-EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 111/311 (35%), Positives = 171/311 (54%), Gaps = 33/311 (10%)
Query: 78 LYDFQLSELRAITQNFSSNYL------LGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--- 128
+ F EL+ +T NF + +GEGGFG V+KGY+++ VAVK
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN--------TTVAVKKLA 63
Query: 129 -LLDIEGLQGHREWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFK 187
++DI + +++ E+ + + +H +LV L+G+ + ++ LVY +MP GSL
Sbjct: 64 AMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL----LD 119
Query: 188 RISV-----SLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDF 242
R+S L W R KIA GAA G+ FLH EN I+RD K++NILLD FTAK+SDF
Sbjct: 120 RLSCLDGTPPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDF 177
Query: 243 GLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDK 302
GLA+ + + T + +R++GT Y APE + G +T KSD+YSFGVVLLE++TG ++D+
Sbjct: 178 GLARASEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDE 236
Query: 303 LRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPK 362
R Q L+D + + + +D ++ S + M +A QC+ RP
Sbjct: 237 HR--EPQLLLDIKEEIEDEEKTIEDYIDKKMNDADST-SVEAMYSVASQCLHEKKNKRPD 293
Query: 363 MAAVVATLESL 373
+ V L+ +
Sbjct: 294 IKKVQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/311 (35%), Positives = 170/311 (54%), Gaps = 33/311 (10%)
Query: 78 LYDFQLSELRAITQNFSSNYL------LGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--- 128
+ F EL+ +T NF + +GEGGFG V+KGY+++ VAVK
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN--------TTVAVKKLA 63
Query: 129 -LLDIEGLQGHREWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFK 187
++DI + +++ E+ + + +H +LV L+G+ + ++ LVY +MP GSL
Sbjct: 64 AMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL----LD 119
Query: 188 RISV-----SLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDF 242
R+S L W R KIA GAA G+ FLH EN I+RD K++NILLD FTAK+SDF
Sbjct: 120 RLSCLDGTPPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDF 177
Query: 243 GLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDK 302
GLA+ + + T + R++GT Y APE + G +T KSD+YSFGVVLLE++TG ++D+
Sbjct: 178 GLARASEKFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDE 236
Query: 303 LRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPK 362
R Q L+D + + + +D ++ S + M +A QC+ RP
Sbjct: 237 HR--EPQLLLDIKEEIEDEEKTIEDYIDKKMNDADST-SVEAMYSVASQCLHEKKNKRPD 293
Query: 363 MAAVVATLESL 373
+ V L+ +
Sbjct: 294 IKKVQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 110/311 (35%), Positives = 169/311 (54%), Gaps = 33/311 (10%)
Query: 78 LYDFQLSELRAITQNFSSNYL------LGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--- 128
+ F EL+ +T NF + +GEGGFG V+KGY+++ VAVK
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN--------TTVAVKKLA 57
Query: 129 -LLDIEGLQGHREWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFK 187
++DI + +++ E+ + + +H +LV L+G+ + ++ LVY +MP GSL
Sbjct: 58 AMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL----LD 113
Query: 188 RISV-----SLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDF 242
R+S L W R KIA GAA G+ FLH EN I+RD K++NILLD FTAK+SDF
Sbjct: 114 RLSCLDGTPPLSWHMRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDF 171
Query: 243 GLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDK 302
GLA+ + + + R++GT Y APE + G +T KSD+YSFGVVLLE++TG ++D+
Sbjct: 172 GLARASEKFAQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDE 230
Query: 303 LRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPK 362
R Q L+D + + + +D ++ S + M +A QC+ RP
Sbjct: 231 HR--EPQLLLDIKEEIEDEEKTIEDYIDKKMNDADST-SVEAMYSVASQCLHEKKNKRPD 287
Query: 363 MAAVVATLESL 373
+ V L+ +
Sbjct: 288 IKKVQQLLQEM 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/242 (39%), Positives = 140/242 (57%), Gaps = 30/242 (12%)
Query: 78 LYDFQLSELRAITQNFSSNYL------LGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--- 128
+ F EL+ +T NF + GEGGFG V+KGY+++ VAVK
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN--------TTVAVKKLA 54
Query: 129 -LLDIEGLQGHREWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFK 187
++DI + +++ E+ + +H +LV L+G+ + ++ LVY + P GSL
Sbjct: 55 AMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSL----LD 110
Query: 188 RISV-----SLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDF 242
R+S L W R KIA GAA G+ FLH EN I+RD K++NILLD FTAK+SDF
Sbjct: 111 RLSCLDGTPPLSWHXRCKIAQGAANGINFLH--ENHHIHRDIKSANILLDEAFTAKISDF 168
Query: 243 GLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDK 302
GLA+ + + +R++GT Y APE + G +T KSD+YSFGVVLLE++TG ++D+
Sbjct: 169 GLARASEKFAQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDE 227
Query: 303 LR 304
R
Sbjct: 228 HR 229
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 129/279 (46%), Gaps = 29/279 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR--EWLAEVIFLGQLRHPHL 156
+G G FGTVH R VAVK+L + R E+L EV + +LRHP++
Sbjct: 45 IGAGSFGTVH--------RAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKR-ISVSLPWGTRLKIAIGAAKGLAFLHGA 215
V +G + +V E++ RGSL L K L RL +A AKG+ +LH
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTG 275
P+++RD K+ N+L+D +T K+ DFGL+++ + S + GT + APE +
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDE 214
Query: 276 HLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAG 335
KSDVYSFGV+L EL T ++ L P V + L R L
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLN--------- 265
Query: 336 QYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL 374
++A + C + P RP A ++ L L+
Sbjct: 266 -------PQVAAIIEGCWTNEPWKRPSFATIMDLLRPLI 297
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 129/279 (46%), Gaps = 29/279 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR--EWLAEVIFLGQLRHPHL 156
+G G FGTVH R VAVK+L + R E+L EV + +LRHP++
Sbjct: 45 IGAGSFGTVH--------RAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKR-ISVSLPWGTRLKIAIGAAKGLAFLHGA 215
V +G + +V E++ RGSL L K L RL +A AKG+ +LH
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTG 275
P+++R+ K+ N+L+D +T K+ DFGL+++ + S + GT + APE +
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDE 214
Query: 276 HLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAG 335
KSDVYSFGV+L EL T ++ L P V + L R L
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLN--------- 265
Query: 336 QYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL 374
++A + C + P RP A ++ L L+
Sbjct: 266 -------PQVAAIIEGCWTNEPWKRPSFATIMDLLRPLI 297
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 137/289 (47%), Gaps = 42/289 (14%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEG----LQGHREWLAEVIFLGQL 151
+G+GGFG VHKG + D VA+K L D EG ++ +E+ EV + L
Sbjct: 27 IGKGGFGLVHKGRLVKD------KSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 152 RHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAF 211
HP++V+L G +V EF+P G L + L + + + W +L++ + A G+ +
Sbjct: 81 NHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEY 137
Query: 212 LHGAENPVIYRDFKTSNILLDS-----DFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGY 266
+ P+++RD ++ NI L S AK++DFGL++ + H + ++G + +
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLLGNFQW 192
Query: 267 AAPEYISTGH--LTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRR 324
APE I T K+D YSF ++L +LTG D+ + + + LR +
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPT-- 250
Query: 325 LRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESL 373
+ PRL V+ L C S +PK RP + +V L L
Sbjct: 251 IPEDCPPRLRN-----------VIEL-CWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 136/289 (47%), Gaps = 42/289 (14%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEG----LQGHREWLAEVIFLGQL 151
+G+GGFG VHKG + D VA+K L D EG ++ +E+ EV + L
Sbjct: 27 IGKGGFGLVHKGRLVKD------KSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 152 RHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAF 211
HP++V+L G +V EF+P G L + L + + + W +L++ + A G+ +
Sbjct: 81 NHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEY 137
Query: 212 LHGAENPVIYRDFKTSNILLDS-----DFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGY 266
+ P+++RD ++ NI L S AK++DFG ++ + H + ++G + +
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVSGLLGNFQW 192
Query: 267 AAPEYISTGH--LTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRR 324
APE I T K+D YSF ++L +LTG D+ + + + LR +
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPT-- 250
Query: 325 LRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESL 373
+ PRL V+ L C S +PK RP + +V L L
Sbjct: 251 IPEDCPPRLRN-----------VIEL-CWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 138/289 (47%), Gaps = 42/289 (14%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEG----LQGHREWLAEVIFLGQL 151
+G+GGFG VHKG + D VA+K L D EG ++ +E+ EV + L
Sbjct: 27 IGKGGFGLVHKGRLVKD------KSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL 80
Query: 152 RHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAF 211
HP++V+L G + R+ V EF+P G L + L + + + W +L++ + A G+ +
Sbjct: 81 NHPNIVKLYG-LMHNPPRM-VMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEY 137
Query: 212 LHGAENPVIYRDFKTSNILLDS-----DFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGY 266
+ P+++RD ++ NI L S AK++DF L++ + H + ++G + +
Sbjct: 138 MQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGLLGNFQW 192
Query: 267 AAPEYISTGH--LTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRR 324
APE I T K+D YSF ++L +LTG D+ + + + LR +
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPT-- 250
Query: 325 LRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESL 373
+ PRL V+ L C S +PK RP + +V L L
Sbjct: 251 IPEDCPPRLRN-----------VIEL-CWSGDPKKRPHFSYIVKELSEL 287
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 104/213 (48%), Gaps = 18/213 (8%)
Query: 93 FSSNYL-----LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE-WLAEVI 146
F YL LGEG FG V Y D G + VAVK L + HR W E+
Sbjct: 28 FHKRYLKKIRDLGEGHFGKV-SLYCYDPTNDG-TGEMVAVKALKADAGPQHRSGWKQEID 85
Query: 147 FLGQLRHPHLVRLIGYCCEDE---ERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAI 203
L L H H+++ G CCED LV E++P GSL ++L R S+ L L A
Sbjct: 86 ILRTLYHEHIIKYKG-CCEDAGAASLQLVMEYVPLGSLRDYL-PRHSIGL--AQLLLFAQ 141
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTH-VTTRVMG 262
+G+A+LH I+RD N+LLD+D K+ DFGLAK PEG + V
Sbjct: 142 QICEGMAYLHAQH--YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDS 199
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE + SDV+SFGV L ELLT
Sbjct: 200 PVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 36/283 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDI-----EGLQGHREWLAEVIFLGQLRH 153
+G G FGTV+KG D VAVK+L++ + LQ + EV L + RH
Sbjct: 43 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKN---EVGVLRKTRH 90
Query: 154 PHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLH 213
+++ +GY + + +V ++ SL +HL I + IA A+G+ +LH
Sbjct: 91 VNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLH 148
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYI- 272
+I+RD K++NI L D T K+ DFGLA + S +H ++ G+ + APE I
Sbjct: 149 AKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 206
Query: 273 --STGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVD 330
+ +SDVY+FG+VL EL+TG+ + + +Q + + YL
Sbjct: 207 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-DQIIFMVGRGYL----------S 255
Query: 331 PRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESL 373
P L+ S K M L +C+ +RP ++A++E L
Sbjct: 256 PDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIELL 297
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 36/283 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDI-----EGLQGHREWLAEVIFLGQLRH 153
+G G FGTV+KG D VAVK+L++ + LQ + EV L + RH
Sbjct: 18 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKN---EVGVLRKTRH 65
Query: 154 PHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLH 213
+++ +GY + + +V ++ SL +HL I + IA A+G+ +LH
Sbjct: 66 VNILLFMGYSTK-PQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLH 123
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYI- 272
+I+RD K++NI L D T K+ DFGLA + S +H ++ G+ + APE I
Sbjct: 124 AKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 181
Query: 273 --STGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVD 330
+ +SDVY+FG+VL EL+TG+ + + +Q + + YL
Sbjct: 182 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-DQIIFMVGRGYL----------S 230
Query: 331 PRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESL 373
P L+ S K M L +C+ +RP ++A++E L
Sbjct: 231 PDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIELL 272
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 36/283 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDI-----EGLQGHREWLAEVIFLGQLRH 153
+G G FGTV+KG D VAVK+L++ + LQ + EV L + RH
Sbjct: 21 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKN---EVGVLRKTRH 68
Query: 154 PHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLH 213
+++ +GY + + +V ++ SL +HL I + IA A+G+ +LH
Sbjct: 69 VNILLFMGYSTK-PQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLH 126
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYI- 272
+I+RD K++NI L D T K+ DFGLA + S +H ++ G+ + APE I
Sbjct: 127 AKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 273 --STGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVD 330
+ +SDVY+FG+VL EL+TG+ + + +Q + + YL
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-DQIIFMVGRGYL----------S 233
Query: 331 PRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESL 373
P L+ S K M L +C+ +RP ++A++E L
Sbjct: 234 PDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIELL 275
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 36/283 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDI-----EGLQGHREWLAEVIFLGQLRH 153
+G G FGTV+KG D VAVK+L++ + LQ + EV L + RH
Sbjct: 44 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKN---EVGVLRKTRH 91
Query: 154 PHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLH 213
+++ +GY + + +V ++ SL +HL I + IA A+G+ +LH
Sbjct: 92 VNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLH 149
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYI- 272
+I+RD K++NI L D T K+ DFGLA + S +H ++ G+ + APE I
Sbjct: 150 AKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 207
Query: 273 --STGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVD 330
+ +SDVY+FG+VL EL+TG+ + + +Q + + YL
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-DQIIFMVGRGYL----------S 256
Query: 331 PRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESL 373
P L+ S K M L +C+ +RP ++A++E L
Sbjct: 257 PDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIELL 298
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 107/213 (50%), Gaps = 18/213 (8%)
Query: 93 FSSNYL-----LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE-WLAEVI 146
F YL LGEG FG V Y D G + VAVK L + HR W E+
Sbjct: 11 FHKRYLKKIRDLGEGHFGKV-SLYCYDPTNDG-TGEMVAVKALKADCGPQHRSGWKQEID 68
Query: 147 FLGQLRHPHLVRLIGYCCED--EERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIAI 203
L L H H+++ G CCED E+ L LV E++P GSL ++L R S+ L L A
Sbjct: 69 ILRTLYHEHIIKYKG-CCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGL--AQLLLFAQ 124
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTH-VTTRVMG 262
+G+A+LH I+R+ N+LLD+D K+ DFGLAK PEG + V
Sbjct: 125 QICEGMAYLHAQH--YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDS 182
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE + SDV+SFGV L ELLT
Sbjct: 183 PVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 36/283 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDI-----EGLQGHREWLAEVIFLGQLRH 153
+G G FGTV+KG D VAVK+L++ + LQ + EV L + RH
Sbjct: 16 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKN---EVGVLRKTRH 63
Query: 154 PHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLH 213
+++ +GY + + +V ++ SL +HL I + IA A+G+ +LH
Sbjct: 64 VNILLFMGYSTK-PQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLH 121
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYI- 272
+I+RD K++NI L D T K+ DFGLA + S +H ++ G+ + APE I
Sbjct: 122 AKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 273 --STGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVD 330
+ +SDVY+FG+VL EL+TG+ + + +Q + + YL
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-DQIIFMVGRGYL----------S 228
Query: 331 PRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESL 373
P L+ S K M L +C+ +RP ++A++E L
Sbjct: 229 PDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIELL 270
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 36/283 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDI-----EGLQGHREWLAEVIFLGQLRH 153
+G G FGTV+KG D VAVK+L++ + LQ + EV L + RH
Sbjct: 21 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKN---EVGVLRKTRH 68
Query: 154 PHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLH 213
+++ +GY + + +V ++ SL +HL I + IA A+G+ +LH
Sbjct: 69 VNILLFMGYSTK-PQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLH 126
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYI- 272
+I+RD K++NI L D T K+ DFGLA + S +H ++ G+ + APE I
Sbjct: 127 AKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 273 --STGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVD 330
+ +SDVY+FG+VL EL+TG+ + + +Q + + YL
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-DQIIFMVGRGYL----------S 233
Query: 331 PRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESL 373
P L+ S K M L +C+ +RP ++A++E L
Sbjct: 234 PDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIELL 275
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 107/213 (50%), Gaps = 18/213 (8%)
Query: 93 FSSNYL-----LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE-WLAEVI 146
F YL LGEG FG V Y D G + VAVK L + HR W E+
Sbjct: 11 FHKRYLKKIRDLGEGHFGKV-SLYCYDPTNDG-TGEMVAVKALKADCGPQHRSGWKQEID 68
Query: 147 FLGQLRHPHLVRLIGYCCED--EERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIAI 203
L L H H+++ G CCED E+ L LV E++P GSL ++L R S+ L L A
Sbjct: 69 ILRTLYHEHIIKYKG-CCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGL--AQLLLFAQ 124
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTH-VTTRVMG 262
+G+A+LH I+R+ N+LLD+D K+ DFGLAK PEG + V
Sbjct: 125 QICEGMAYLHSQH--YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDS 182
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE + SDV+SFGV L ELLT
Sbjct: 183 PVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 130/281 (46%), Gaps = 36/281 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG V GY + + VAVK L +G +LAE + QL+H LVR
Sbjct: 29 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 80
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L + E ++ E+M GSL + L + L L +A A+G+AF+ E
Sbjct: 81 LYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 137
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
I+RD + +NIL+ + K++DFGLA++ + T R + + APE I+ G
Sbjct: 138 YIHRDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGT 194
Query: 277 LTTKSDVYSFGVVLLELLT-GRRSMDKL-RPKSEQNLVDWAKPYLRSSRRLRYIVDPRLA 334
T KSDV+SFG++L E++T GR + P+ QNL R R +R P
Sbjct: 195 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-------RGYRMVRPDNCP--- 244
Query: 335 GQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
+E+ L C P+DRP + + LE
Sbjct: 245 --------EELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 277
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 130/281 (46%), Gaps = 36/281 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG V GY + + VAVK L +G +LAE + QL+H LVR
Sbjct: 27 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 78
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L + E ++ E+M GSL + L + L L +A A+G+AF+ E
Sbjct: 79 LYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 135
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
I+RD + +NIL+ + K++DFGLA++ + T R + + APE I+ G
Sbjct: 136 YIHRDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGT 192
Query: 277 LTTKSDVYSFGVVLLELLT-GRRSMDKL-RPKSEQNLVDWAKPYLRSSRRLRYIVDPRLA 334
T KSDV+SFG++L E++T GR + P+ QNL R R +R P
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-------RGYRMVRPDNCP--- 242
Query: 335 GQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
+E+ L C P+DRP + + LE
Sbjct: 243 --------EELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 275
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 130/281 (46%), Gaps = 36/281 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG V GY + + VAVK L +G +LAE + QL+H LVR
Sbjct: 30 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 81
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L + E ++ E+M GSL + L + L L +A A+G+AF+ E
Sbjct: 82 LYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 138
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
I+RD + +NIL+ + K++DFGLA++ + T R + + APE I+ G
Sbjct: 139 YIHRDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGT 195
Query: 277 LTTKSDVYSFGVVLLELLT-GRRSMDKL-RPKSEQNLVDWAKPYLRSSRRLRYIVDPRLA 334
T KSDV+SFG++L E++T GR + P+ QNL R R +R P
Sbjct: 196 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-------RGYRMVRPDNCP--- 245
Query: 335 GQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
+E+ L C P+DRP + + LE
Sbjct: 246 --------EELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 278
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 36/283 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDI-----EGLQGHREWLAEVIFLGQLRH 153
+G G FGTV+KG D VAVK+L++ + LQ + EV L + RH
Sbjct: 16 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKN---EVGVLRKTRH 63
Query: 154 PHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLH 213
+++ +GY + +V ++ SL +HL I + IA A+G+ +LH
Sbjct: 64 VNILLFMGYSTA-PQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLH 121
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYI- 272
+I+RD K++NI L D T K+ DFGLA + S +H ++ G+ + APE I
Sbjct: 122 AKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 273 --STGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVD 330
+ +SDVY+FG+VL EL+TG+ + + +Q + + YL
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-DQIIFMVGRGYL----------S 228
Query: 331 PRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESL 373
P L+ S K M L +C+ +RP ++A++E L
Sbjct: 229 PDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIELL 270
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 36/283 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDI-----EGLQGHREWLAEVIFLGQLRH 153
+G G FGTV+KG D VAVK+L++ + LQ + EV L + RH
Sbjct: 36 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKN---EVGVLRKTRH 83
Query: 154 PHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLH 213
+++ +GY + + +V ++ SL +HL I + IA A+G+ +LH
Sbjct: 84 VNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLH 141
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYI- 272
+I+RD K++NI L D T K+ DFGLA S +H ++ G+ + APE I
Sbjct: 142 AKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 199
Query: 273 --STGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVD 330
+ +SDVY+FG+VL EL+TG+ + + +Q + + YL
Sbjct: 200 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-DQIIFMVGRGYL----------S 248
Query: 331 PRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESL 373
P L+ S K M L +C+ +RP ++A++E L
Sbjct: 249 PDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIELL 290
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 130/281 (46%), Gaps = 36/281 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG V GY + + VAVK L +G +LAE + QL+H LVR
Sbjct: 31 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 82
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L + E ++ E+M GSL + L + L L +A A+G+AF+ E
Sbjct: 83 LYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 139
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
I+RD + +NIL+ + K++DFGLA++ + T R + + APE I+ G
Sbjct: 140 YIHRDLRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGT 196
Query: 277 LTTKSDVYSFGVVLLELLT-GRRSMDKL-RPKSEQNLVDWAKPYLRSSRRLRYIVDPRLA 334
T KSDV+SFG++L E++T GR + P+ QNL R R +R P
Sbjct: 197 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-------RGYRMVRPDNCP--- 246
Query: 335 GQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
+E+ L C P+DRP + + LE
Sbjct: 247 --------EELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 279
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 130/281 (46%), Gaps = 36/281 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG V GY + + VAVK L +G +LAE + QL+H LVR
Sbjct: 21 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L + E ++ E+M GSL + L + L L +A A+G+AF+ E
Sbjct: 73 LYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 129
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
I+RD + +NIL+ + K++DFGLA++ + T R + + APE I+ G
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGT 186
Query: 277 LTTKSDVYSFGVVLLELLT-GRRSMDKL-RPKSEQNLVDWAKPYLRSSRRLRYIVDPRLA 334
T KSDV+SFG++L E++T GR + P+ QNL R R +R P
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-------RGYRMVRPDNCP--- 236
Query: 335 GQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
+E+ L C P+DRP + + LE
Sbjct: 237 --------EELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 130/281 (46%), Gaps = 36/281 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG V GY + + VAVK L +G +LAE + QL+H LVR
Sbjct: 27 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 78
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L + E ++ E+M GSL + L + L L +A A+G+AF+ E
Sbjct: 79 LYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 135
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
I+RD + +NIL+ + K++DFGLA++ + T R + + APE I+ G
Sbjct: 136 YIHRDLRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGT 192
Query: 277 LTTKSDVYSFGVVLLELLT-GRRSMDKL-RPKSEQNLVDWAKPYLRSSRRLRYIVDPRLA 334
T KSDV+SFG++L E++T GR + P+ QNL R R +R P
Sbjct: 193 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-------RGYRMVRPDNCP--- 242
Query: 335 GQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
+E+ L C P+DRP + + LE
Sbjct: 243 --------EELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 275
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 129/275 (46%), Gaps = 28/275 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+G G FG VH GY L VA+K + EG +++ E + +L HP LV+
Sbjct: 15 IGSGQFGLVHLGY-------WLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L G C E LV+EFM G L ++L + + T L + + +G+A+L E
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLE--EAS 123
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLT 278
VI+RD N L+ + K+SDFG+ + + T +T +A+PE S +
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYS 182
Query: 279 TKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAGQYS 338
+KSDV+SFGV++ E+ + + + R SE +V+ R + PRLA +
Sbjct: 183 SKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VVEDISTGFR-------LYKPRLASTHV 233
Query: 339 VKGAKEMAVLALQCISVNPKDRPKMAAVVATLESL 373
+ + C P+DRP + ++ L ++
Sbjct: 234 YQ-------IMNHCWKERPEDRPAFSRLLRQLAAI 261
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 130/281 (46%), Gaps = 36/281 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG V GY + + VAVK L +G +LAE + QL+H LVR
Sbjct: 26 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 77
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L + E ++ E+M GSL + L + L L +A A+G+AF+ E
Sbjct: 78 LYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 134
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
I+RD + +NIL+ + K++DFGLA++ + T R + + APE I+ G
Sbjct: 135 YIHRDLRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGT 191
Query: 277 LTTKSDVYSFGVVLLELLT-GRRSMDKL-RPKSEQNLVDWAKPYLRSSRRLRYIVDPRLA 334
T KSDV+SFG++L E++T GR + P+ QNL R R +R P
Sbjct: 192 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-------RGYRMVRPDNCP--- 241
Query: 335 GQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
+E+ L C P+DRP + + LE
Sbjct: 242 --------EELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 274
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 130/280 (46%), Gaps = 36/280 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG V GY + + VAVK L +G +LAE + QL+H LVR
Sbjct: 22 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 73
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L + E ++ E+M GSL + L + L L +A A+G+AF+ E
Sbjct: 74 LYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 130
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
I+RD + +NIL+ + K++DFGLA++ + T R + + APE I+ G
Sbjct: 131 YIHRDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGT 187
Query: 277 LTTKSDVYSFGVVLLELLT-GRRSMDKL-RPKSEQNLVDWAKPYLRSSRRLRYIVDPRLA 334
T KSDV+SFG++L E++T GR + P+ QNL R R +R P
Sbjct: 188 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-------RGYRMVRPDNCP--- 237
Query: 335 GQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL 374
+E+ L C P+DRP + + LE
Sbjct: 238 --------EELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 269
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 130/281 (46%), Gaps = 36/281 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG V GY + + VAVK L +G +LAE + QL+H LVR
Sbjct: 23 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 74
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L + E ++ E+M GSL + L + L L +A A+G+AF+ E
Sbjct: 75 LYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 131
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
I+RD + +NIL+ + K++DFGLA++ + T R + + APE I+ G
Sbjct: 132 YIHRDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGT 188
Query: 277 LTTKSDVYSFGVVLLELLT-GRRSMDKL-RPKSEQNLVDWAKPYLRSSRRLRYIVDPRLA 334
T KSDV+SFG++L E++T GR + P+ QNL R R +R P
Sbjct: 189 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-------RGYRMVRPDNCP--- 238
Query: 335 GQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
+E+ L C P+DRP + + LE
Sbjct: 239 --------EELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 271
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 36/283 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDI-----EGLQGHREWLAEVIFLGQLRH 153
+G G FGTV+KG D VAVK+L++ + LQ + EV L + RH
Sbjct: 44 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKN---EVGVLRKTRH 91
Query: 154 PHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLH 213
+++ +GY + + +V ++ SL +HL I + IA A+G+ +LH
Sbjct: 92 VNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLH 149
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYI- 272
+I+RD K++NI L D T K+ DFGLA S +H ++ G+ + APE I
Sbjct: 150 AKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 207
Query: 273 --STGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVD 330
+ +SDVY+FG+VL EL+TG+ + + +Q + + YL
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-DQIIFMVGRGYL----------S 256
Query: 331 PRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESL 373
P L+ S K M L +C+ +RP ++A++E L
Sbjct: 257 PDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIELL 298
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 135/283 (47%), Gaps = 36/283 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDI-----EGLQGHREWLAEVIFLGQLRH 153
+G G FGTV+KG D VAVK+L++ + LQ + EV L + RH
Sbjct: 16 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKN---EVGVLRKTRH 63
Query: 154 PHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLH 213
+++ +GY + + +V ++ SL +HL I + IA A+G+ +LH
Sbjct: 64 VNILLFMGYSTK-PQLAIVTQWCEGSSLYHHL-HIIETKFEMIKLIDIARQTAQGMDYLH 121
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYI- 272
+I+RD K++NI L D T K+ DFGLA S +H ++ G+ + APE I
Sbjct: 122 AKS--IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 273 --STGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVD 330
+ +SDVY+FG+VL EL+TG+ + + +Q + + YL
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-DQIIFMVGRGYL----------S 228
Query: 331 PRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESL 373
P L+ S K M L +C+ +RP ++A++E L
Sbjct: 229 PDLSKVRS-NCPKAMKRLMAECLKKKRDERPLFPQILASIELL 270
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 130/280 (46%), Gaps = 36/280 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG V GY + + VAVK L +G +LAE + QL+H LVR
Sbjct: 21 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L + E ++ E+M GSL + L + L L +A A+G+AF+ E
Sbjct: 73 LYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 129
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
I+RD + +NIL+ + K++DFGLA++ + T R + + APE I+ G
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGT 186
Query: 277 LTTKSDVYSFGVVLLELLT-GRRSMDKL-RPKSEQNLVDWAKPYLRSSRRLRYIVDPRLA 334
T KSDV+SFG++L E++T GR + P+ QNL R R +R P
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-------RGYRMVRPDNCP--- 236
Query: 335 GQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL 374
+E+ L C P+DRP + + LE
Sbjct: 237 --------EELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 130/281 (46%), Gaps = 36/281 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG V GY + + VAVK L +G +LAE + QL+H LVR
Sbjct: 21 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L + E ++ E+M GSL + L + L L +A A+G+AF+ E
Sbjct: 73 LYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 129
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
I+RD + +NIL+ + K++DFGLA++ + T R + + APE I+ G
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGT 186
Query: 277 LTTKSDVYSFGVVLLELLT-GRRSMDKL-RPKSEQNLVDWAKPYLRSSRRLRYIVDPRLA 334
T KSDV+SFG++L E++T GR + P+ QNL R R +R P
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-------RGYRMVRPDNCP--- 236
Query: 335 GQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
+E+ L C P+DRP + + LE
Sbjct: 237 --------EELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 135/283 (47%), Gaps = 36/283 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDI-----EGLQGHREWLAEVIFLGQLRH 153
+G G FGTV+KG D VAVK+L++ + LQ + EV L + RH
Sbjct: 20 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKN---EVGVLRKTRH 67
Query: 154 PHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLH 213
+++ +GY + + +V ++ SL +HL + IA A+G+ +LH
Sbjct: 68 VNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLH 125
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYI- 272
+I+RD K++NI L D T K+ DFGLA + S +H ++ G+ + APE I
Sbjct: 126 A--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 183
Query: 273 --STGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVD 330
+ + +SDVY+FG+VL EL+TG+ + + + +++ R +
Sbjct: 184 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ--IIEMVG---------RGSLS 232
Query: 331 PRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESL 373
P L+ S K M L +C+ +RP ++A +E L
Sbjct: 233 PDLSKVRS-NCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 274
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 128/275 (46%), Gaps = 28/275 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+G G FG VH GY L VA+K + EG +++ E + +L HP LV+
Sbjct: 15 IGSGQFGLVHLGY-------WLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L G C E LV+EFM G L ++L + + T L + + +G+A+L E
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLE--EAC 123
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLT 278
VI+RD N L+ + K+SDFG+ + + T +T +A+PE S +
Sbjct: 124 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYS 182
Query: 279 TKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAGQYS 338
+KSDV+SFGV++ E+ + + + R SE +V+ R + PRLA +
Sbjct: 183 SKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VVEDISTGFR-------LYKPRLASTHV 233
Query: 339 VKGAKEMAVLALQCISVNPKDRPKMAAVVATLESL 373
+ + C P+DRP + ++ L +
Sbjct: 234 YQ-------IMNHCWKERPEDRPAFSRLLRQLAEI 261
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 130/280 (46%), Gaps = 36/280 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG V GY + + VAVK L +G +LAE + QL+H LVR
Sbjct: 16 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 67
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L + E ++ E+M GSL + L + L L +A A+G+AF+ E
Sbjct: 68 LYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 124
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
I+RD + +NIL+ + K++DFGLA++ + T R + + APE I+ G
Sbjct: 125 YIHRDLRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGT 181
Query: 277 LTTKSDVYSFGVVLLELLT-GRRSMDKL-RPKSEQNLVDWAKPYLRSSRRLRYIVDPRLA 334
T KSDV+SFG++L E++T GR + P+ QNL R R +R P
Sbjct: 182 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-------RGYRMVRPDNCP--- 231
Query: 335 GQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL 374
+E+ L C P+DRP + + LE
Sbjct: 232 --------EELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 263
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 128/275 (46%), Gaps = 28/275 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+G G FG VH GY L VA+K + EG +++ E + +L HP LV+
Sbjct: 13 IGSGQFGLVHLGY-------WLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQ 64
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L G C E LV+EFM G L ++L + + T L + + +G+A+L E
Sbjct: 65 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLE--EAC 121
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLT 278
VI+RD N L+ + K+SDFG+ + + T +T +A+PE S +
Sbjct: 122 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYS 180
Query: 279 TKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAGQYS 338
+KSDV+SFGV++ E+ + + + R SE +V+ R + PRLA +
Sbjct: 181 SKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VVEDISTGFR-------LYKPRLASTHV 231
Query: 339 VKGAKEMAVLALQCISVNPKDRPKMAAVVATLESL 373
+ + C P+DRP + ++ L +
Sbjct: 232 YQ-------IMNHCWKERPEDRPAFSRLLRQLAEI 259
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 128/287 (44%), Gaps = 32/287 (11%)
Query: 96 NYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPH 155
N ++G G FG V+ G + D+ G K L I + ++L E I + HP+
Sbjct: 36 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 156 LVRLIGYCCEDE-ERLLVYEFMPRGSLENHLFKRISVSLPWGTRL-KIAIGAAKGLAFLH 213
++ L+G C E L+V +M G L N F R P L + AKG+ FL
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKFL- 150
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK--MGPEGSNTHVTTRVMGTYGYAAPEY 271
A ++RD N +LD FT K++DFGLA+ + E + H T + A E
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES 209
Query: 272 ISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRL---RYI 328
+ T TTKSDV+SFGV+L EL+T P + N D YL RRL Y
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFD-ITVYLLQGRRLLQPEYC 263
Query: 329 VDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
DP + + L+C + RP + +V+ + ++ +
Sbjct: 264 PDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFS 297
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 128/275 (46%), Gaps = 28/275 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+G G FG VH GY L VA+K + EG +++ E + +L HP LV+
Sbjct: 18 IGSGQFGLVHLGY-------WLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQ 69
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L G C E LV+EFM G L ++L + + T L + + +G+A+L E
Sbjct: 70 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLE--EAC 126
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLT 278
VI+RD N L+ + K+SDFG+ + + T +T +A+PE S +
Sbjct: 127 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYS 185
Query: 279 TKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAGQYS 338
+KSDV+SFGV++ E+ + + + R SE +V+ R + PRLA +
Sbjct: 186 SKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VVEDISTGFR-------LYKPRLASTHV 236
Query: 339 VKGAKEMAVLALQCISVNPKDRPKMAAVVATLESL 373
+ + C P+DRP + ++ L +
Sbjct: 237 YQ-------IMNHCWRERPEDRPAFSRLLRQLAEI 264
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 133/283 (46%), Gaps = 36/283 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDI-----EGLQGHREWLAEVIFLGQLRH 153
+G G FGTV+KG D VAVK+L++ + LQ + EV L + RH
Sbjct: 32 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKN---EVGVLRKTRH 79
Query: 154 PHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLH 213
+++ +GY + + +V ++ SL +HL + IA A+G+ +LH
Sbjct: 80 VNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLH 137
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYI- 272
+I+RD K++NI L D T K+ DFGLA S +H ++ G+ + APE I
Sbjct: 138 A--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
Query: 273 --STGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVD 330
+ + +SDVY+FG+VL EL+TG+ P S N D + R +
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQ------LPYSNINNRDQIIEMVG-----RGSLS 244
Query: 331 PRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESL 373
P L+ S K M L +C+ +RP ++A +E L
Sbjct: 245 PDLSKVRS-NCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 128/275 (46%), Gaps = 28/275 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+G G FG VH GY L VA+K + EG +++ E + +L HP LV+
Sbjct: 35 IGSGQFGLVHLGY-------WLNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQ 86
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L G C E LV+EFM G L ++L + + T L + + +G+A+L E
Sbjct: 87 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLE--EAC 143
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLT 278
VI+RD N L+ + K+SDFG+ + + T +T +A+PE S +
Sbjct: 144 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYS 202
Query: 279 TKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAGQYS 338
+KSDV+SFGV++ E+ + + + R SE +V+ R + PRLA +
Sbjct: 203 SKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VVEDISTGFR-------LYKPRLASTHV 253
Query: 339 VKGAKEMAVLALQCISVNPKDRPKMAAVVATLESL 373
+ + C P+DRP + ++ L +
Sbjct: 254 YQ-------IMNHCWKERPEDRPAFSRLLRQLAEI 281
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 127/287 (44%), Gaps = 32/287 (11%)
Query: 96 NYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPH 155
N ++G G FG V+ G + D+ G K L I + ++L E I + HP+
Sbjct: 33 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 156 LVRLIGYCCEDE-ERLLVYEFMPRGSLENHLFKRISVSLPWGTRL-KIAIGAAKGLAFLH 213
++ L+G C E L+V +M G L N F R P L + AKG+ FL
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKFL- 147
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK--MGPEGSNTHVTTRVMGTYGYAAPEY 271
A ++RD N +LD FT K++DFGLA+ E + H T + A E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 206
Query: 272 ISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRL---RYI 328
+ T TTKSDV+SFGV+L EL+T P + N D YL RRL Y
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFD-ITVYLLQGRRLLQPEYC 260
Query: 329 VDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
DP + + L+C + RP + +V+ + ++ +
Sbjct: 261 PDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFS 294
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 127/287 (44%), Gaps = 32/287 (11%)
Query: 96 NYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPH 155
N ++G G FG V+ G + D+ G K L I + ++L E I + HP+
Sbjct: 40 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 156 LVRLIGYCCEDE-ERLLVYEFMPRGSLENHLFKRISVSLPWGTRL-KIAIGAAKGLAFLH 213
++ L+G C E L+V +M G L N F R P L + AKG+ FL
Sbjct: 98 VLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKFL- 154
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK--MGPEGSNTHVTTRVMGTYGYAAPEY 271
A ++RD N +LD FT K++DFGLA+ E + H T + A E
Sbjct: 155 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 213
Query: 272 ISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRL---RYI 328
+ T TTKSDV+SFGV+L EL+T P + N D YL RRL Y
Sbjct: 214 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFD-ITVYLLQGRRLLQPEYC 267
Query: 329 VDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
DP + + L+C + RP + +V+ + ++ +
Sbjct: 268 PDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFS 301
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 130/280 (46%), Gaps = 36/280 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG V GY + + VAVK L +G +LAE + QL+H LVR
Sbjct: 17 LGAGQFGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 68
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L + E ++ E+M GSL + L + L L +A A+G+AF+ E
Sbjct: 69 LYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 125
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
I+R+ + +NIL+ + K++DFGLA++ + T R + + APE I+ G
Sbjct: 126 YIHRNLRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGT 182
Query: 277 LTTKSDVYSFGVVLLELLT-GRRSMDKL-RPKSEQNLVDWAKPYLRSSRRLRYIVDPRLA 334
T KSDV+SFG++L E++T GR + P+ QNL R R +R P
Sbjct: 183 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-------RGYRMVRPDNCP--- 232
Query: 335 GQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL 374
+E+ L C P+DRP + + LE
Sbjct: 233 --------EELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 264
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 127/287 (44%), Gaps = 32/287 (11%)
Query: 96 NYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPH 155
N ++G G FG V+ G + D+ G K L I + ++L E I + HP+
Sbjct: 36 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 156 LVRLIGYCCEDE-ERLLVYEFMPRGSLENHLFKRISVSLPWGTRL-KIAIGAAKGLAFLH 213
++ L+G C E L+V +M G L N F R P L + AKG+ FL
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKFL- 150
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK--MGPEGSNTHVTTRVMGTYGYAAPEY 271
A ++RD N +LD FT K++DFGLA+ E + H T + A E
Sbjct: 151 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 209
Query: 272 ISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRL---RYI 328
+ T TTKSDV+SFGV+L EL+T P + N D YL RRL Y
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFD-ITVYLLQGRRLLQPEYC 263
Query: 329 VDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
DP + + L+C + RP + +V+ + ++ +
Sbjct: 264 PDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFS 297
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 127/287 (44%), Gaps = 32/287 (11%)
Query: 96 NYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPH 155
N ++G G FG V+ G + D+ G K L I + ++L E I + HP+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 156 LVRLIGYCCEDE-ERLLVYEFMPRGSLENHLFKRISVSLPWGTRL-KIAIGAAKGLAFLH 213
++ L+G C E L+V +M G L N F R P L + AKG+ FL
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKFL- 149
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK--MGPEGSNTHVTTRVMGTYGYAAPEY 271
A ++RD N +LD FT K++DFGLA+ E + H T + A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 272 ISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRL---RYI 328
+ T TTKSDV+SFGV+L EL+T P + N D YL RRL Y
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFD-ITVYLLQGRRLLQPEYC 262
Query: 329 VDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
DP + + L+C + RP + +V+ + ++ +
Sbjct: 263 PDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFS 296
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 133/283 (46%), Gaps = 36/283 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDI-----EGLQGHREWLAEVIFLGQLRH 153
+G G FGTV+KG D VAVK+L++ + LQ + EV L + RH
Sbjct: 32 IGSGSFGTVYKGKWHGD---------VAVKMLNVTAPTPQQLQAFKN---EVGVLRKTRH 79
Query: 154 PHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLH 213
+++ +GY + +V ++ SL +HL + IA A+G+ +LH
Sbjct: 80 VNILLFMGYSTA-PQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLH 137
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYI- 272
+I+RD K++NI L D T K+ DFGLA S +H ++ G+ + APE I
Sbjct: 138 A--KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
Query: 273 --STGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVD 330
+ + +SDVY+FG+VL EL+TG+ + + + +++ R +
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ--IIEMVG---------RGSLS 244
Query: 331 PRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESL 373
P L+ S K M L +C+ +RP ++A +E L
Sbjct: 245 PDLSKVRS-NCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 127/287 (44%), Gaps = 32/287 (11%)
Query: 96 NYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPH 155
N ++G G FG V+ G + D+ G K L I + ++L E I + HP+
Sbjct: 94 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 156 LVRLIGYCCEDE-ERLLVYEFMPRGSLENHLFKRISVSLPWGTRL-KIAIGAAKGLAFLH 213
++ L+G C E L+V +M G L N F R P L + AKG+ FL
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKFL- 208
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK--MGPEGSNTHVTTRVMGTYGYAAPEY 271
A ++RD N +LD FT K++DFGLA+ E + H T + A E
Sbjct: 209 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 267
Query: 272 ISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRL---RYI 328
+ T TTKSDV+SFGV+L EL+T P + N D YL RRL Y
Sbjct: 268 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFD-ITVYLLQGRRLLQPEYC 321
Query: 329 VDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
DP + + L+C + RP + +V+ + ++ +
Sbjct: 322 PDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFS 355
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 127/287 (44%), Gaps = 32/287 (11%)
Query: 96 NYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPH 155
N ++G G FG V+ G + D+ G K L I + ++L E I + HP+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 156 LVRLIGYCCEDE-ERLLVYEFMPRGSLENHLFKRISVSLPWGTRL-KIAIGAAKGLAFLH 213
++ L+G C E L+V +M G L N F R P L + AKG+ FL
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKFL- 149
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK--MGPEGSNTHVTTRVMGTYGYAAPEY 271
A ++RD N +LD FT K++DFGLA+ E + H T + A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 272 ISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRL---RYI 328
+ T TTKSDV+SFGV+L EL+T P + N D YL RRL Y
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFD-ITVYLLQGRRLLQPEYC 262
Query: 329 VDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
DP + + L+C + RP + +V+ + ++ +
Sbjct: 263 PDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFS 296
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 10/194 (5%)
Query: 106 TVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVRLIGYCCE 165
T+ KG D + + VAVK + + + +LAE + QLRH +LV+L+G E
Sbjct: 19 TIGKGEFGDVMLGDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 166 DEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDF 224
++ L +V E+M +GSL ++L R L LK ++ + + +L G N ++RD
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG--NNFVHRDL 134
Query: 225 KTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVY 284
N+L+ D AK+SDFGL K E S+T T ++ + APE + +TKSDV+
Sbjct: 135 AARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKL--PVKWTAPEALREAAFSTKSDVW 189
Query: 285 SFGVVLLELLTGRR 298
SFG++L E+ + R
Sbjct: 190 SFGILLWEIYSFGR 203
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 10/194 (5%)
Query: 106 TVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVRLIGYCCE 165
T+ KG D + + VAVK + + + +LAE + QLRH +LV+L+G E
Sbjct: 28 TIGKGEFGDVMLGDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 166 DEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDF 224
++ L +V E+M +GSL ++L R L LK ++ + + +L G N ++RD
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG--NNFVHRDL 143
Query: 225 KTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVY 284
N+L+ D AK+SDFGL K E S+T T ++ + APE + +TKSDV+
Sbjct: 144 AARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKL--PVKWTAPEALREKKFSTKSDVW 198
Query: 285 SFGVVLLELLTGRR 298
SFG++L E+ + R
Sbjct: 199 SFGILLWEIYSFGR 212
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 137/285 (48%), Gaps = 24/285 (8%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQ 150
N S + ++G G FG V G + K +VA+K L + + R ++L E +GQ
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 151 LRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLA 210
HP+++RL G + + ++V E+M GSL++ L K + + G A G+
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMK 161
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGT-YGYAAP 269
+L ++ ++RD NIL++S+ K+SDFGLA++ + TTR + +P
Sbjct: 162 YL--SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 270 EYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIV 329
E I+ T+ SDV+S+G+VL E+++ RP E + D K + RL +
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGE-----RPYWEMSNQDVIKA-VDEGYRLPPPM 273
Query: 330 DPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL 374
D A + L L C + +RPK +V+ L+ L+
Sbjct: 274 DCPAA----------LYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 127/287 (44%), Gaps = 32/287 (11%)
Query: 96 NYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPH 155
N ++G G FG V+ G + D+ G K L I + ++L E I + HP+
Sbjct: 34 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 156 LVRLIGYCCEDE-ERLLVYEFMPRGSLENHLFKRISVSLPWGTRL-KIAIGAAKGLAFLH 213
++ L+G C E L+V +M G L N F R P L + AKG+ +L
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKYL- 148
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK--MGPEGSNTHVTTRVMGTYGYAAPEY 271
A ++RD N +LD FT K++DFGLA+ E + H T + A E
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 272 ISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRL---RYI 328
+ T TTKSDV+SFGV+L EL+T P + N D YL RRL Y
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFD-ITVYLLQGRRLLQPEYC 261
Query: 329 VDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
DP + + L+C + RP + +V+ + ++ +
Sbjct: 262 PDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFS 295
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 10/194 (5%)
Query: 106 TVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVRLIGYCCE 165
T+ KG D + + VAVK + + + +LAE + QLRH +LV+L+G E
Sbjct: 200 TIGKGEFGDVMLGDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 166 DEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDF 224
++ L +V E+M +GSL ++L R L LK ++ + + +L G N ++RD
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG--NNFVHRDL 315
Query: 225 KTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVY 284
N+L+ D AK+SDFGL K E S+T T ++ + APE + +TKSDV+
Sbjct: 316 AARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKL--PVKWTAPEALREKKFSTKSDVW 370
Query: 285 SFGVVLLELLTGRR 298
SFG++L E+ + R
Sbjct: 371 SFGILLWEIYSFGR 384
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 105/194 (54%), Gaps = 10/194 (5%)
Query: 106 TVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVRLIGYCCE 165
T+ KG D + + VAVK I+ + +LAE + QLRH +LV+L+G E
Sbjct: 13 TIGKGEFGDVMLGDYRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 166 DEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDF 224
++ L +V E+M +GSL ++L R L LK ++ + + +L G N ++RD
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG--NNFVHRDL 128
Query: 225 KTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVY 284
N+L+ D AK+SDFGL K E S+T T ++ + APE + +TKSDV+
Sbjct: 129 AARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKL--PVKWTAPEALREKKFSTKSDVW 183
Query: 285 SFGVVLLELLTGRR 298
SFG++L E+ + R
Sbjct: 184 SFGILLWEIYSFGR 197
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 127/275 (46%), Gaps = 28/275 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+G G FG VH GY L VA+K + EG +++ E + +L HP LV+
Sbjct: 16 IGSGQFGLVHLGY-------WLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQ 67
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L G C E LV EFM G L ++L + + T L + + +G+A+L E
Sbjct: 68 LYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGL-FAAETLLGMCLDVCEGMAYLE--EAC 124
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLT 278
VI+RD N L+ + K+SDFG+ + + T +T +A+PE S +
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYS 183
Query: 279 TKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAGQYS 338
+KSDV+SFGV++ E+ + + + R SE +V+ R + PRLA +
Sbjct: 184 SKSDVWSFGVLMWEVFSEGKIPYENRSNSE--VVEDISTGFR-------LYKPRLASTHV 234
Query: 339 VKGAKEMAVLALQCISVNPKDRPKMAAVVATLESL 373
+ + C P+DRP + ++ L +
Sbjct: 235 YQ-------IMNHCWRERPEDRPAFSRLLRQLAEI 262
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 129/281 (45%), Gaps = 36/281 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G G V GY + + VAVK L +G +LAE + QL+H LVR
Sbjct: 21 LGAGQAGEVWMGYYNGHTK-------VAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVR 72
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L + E ++ E+M GSL + L + L L +A A+G+AF+ E
Sbjct: 73 LYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE--ERN 129
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
I+RD + +NIL+ + K++DFGLA++ + T R + + APE I+ G
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLI---EDAEXTAREGAKFPIKWTAPEAINYGT 186
Query: 277 LTTKSDVYSFGVVLLELLT-GRRSMDKL-RPKSEQNLVDWAKPYLRSSRRLRYIVDPRLA 334
T KSDV+SFG++L E++T GR + P+ QNL R R +R P
Sbjct: 187 FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-------RGYRMVRPDNCP--- 236
Query: 335 GQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
+E+ L C P+DRP + + LE
Sbjct: 237 --------EELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 131/283 (46%), Gaps = 36/283 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDI-----EGLQGHREWLAEVIFLGQLRH 153
+G G FGTV+KG D VAVK+L + E Q R EV L + RH
Sbjct: 44 IGSGSFGTVYKGKWHGD---------VAVKILKVVDPTPEQFQAFRN---EVAVLRKTRH 91
Query: 154 PHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLH 213
+++ +GY +D +V ++ SL HL + + IA A+G+ +LH
Sbjct: 92 VNILLFMGYMTKDN-LAIVTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLH 149
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYI- 272
A+N +I+RD K++NI L T K+ DFGLA + S + + G+ + APE I
Sbjct: 150 -AKN-IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIR 207
Query: 273 --STGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVD 330
+ +SDVYS+G+VL EL+TG + + +Q + + Y
Sbjct: 208 MQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR-DQIIFMVGRGY----------AS 256
Query: 331 PRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESL 373
P L+ Y K M L C+ ++RP +++++E L
Sbjct: 257 PDLSKLYK-NCPKAMKRLVADCVKKVKEERPLFPQILSSIELL 298
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 24/285 (8%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQ 150
N S + ++G G FG V G + K +VA+K L + + R ++L E +GQ
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 151 LRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLA 210
HP+++RL G + + ++V E+M GSL++ L K + + G A G+
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMK 161
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGT-YGYAAP 269
+L ++ ++RD NIL++S+ K+SDFGL+++ + TTR + +P
Sbjct: 162 YL--SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 270 EYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIV 329
E I+ T+ SDV+S+G+VL E+++ RP E + D K + RL +
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGE-----RPYWEMSNQDVIKA-VDEGYRLPPPM 273
Query: 330 DPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL 374
D A + L L C + +RPK +V+ L+ L+
Sbjct: 274 DCPAA----------LYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 103/213 (48%), Gaps = 18/213 (8%)
Query: 93 FSSNYL-----LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL-DIEGLQGHREWLAEVI 146
F YL LGEG FG V Y D G + VAVK L + G Q W E+
Sbjct: 5 FHKRYLKKIRDLGEGHFGKV-SLYCYDPTNDG-TGEMVAVKALKEGCGPQLRSGWQREIE 62
Query: 147 FLGQLRHPHLVRLIGYCCEDEER---LLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAI 203
L L H H+V+ G CCED+ LV E++P GSL ++L R V L L A
Sbjct: 63 ILRTLYHEHIVKYKG-CCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGL--AQLLLFAQ 118
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTH-VTTRVMG 262
+G+A+LH I+R N+LLD+D K+ DFGLAK PEG + V
Sbjct: 119 QICEGMAYLHAQH--YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDS 176
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE + SDV+SFGV L ELLT
Sbjct: 177 PVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 24/285 (8%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQ 150
N S + ++G G FG V G + K +VA+K L + + R ++L E +GQ
Sbjct: 44 NISIDKVVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 100
Query: 151 LRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLA 210
HP+++RL G + + ++V E+M GSL++ L K + + G A G+
Sbjct: 101 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMK 159
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGT-YGYAAP 269
+L ++ ++RD NIL++S+ K+SDFGL+++ + TTR + +P
Sbjct: 160 YL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 217
Query: 270 EYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIV 329
E I+ T+ SDV+S+G+VL E+++ RP E + D K + RL +
Sbjct: 218 EAIAYRKFTSASDVWSYGIVLWEVMSYGE-----RPYWEMSNQDVIKA-VDEGYRLPPPM 271
Query: 330 DPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL 374
D A + L L C + +RPK +V+ L+ L+
Sbjct: 272 DCPAA----------LYQLMLDCWQKDRNNRPKFEQIVSILDKLI 306
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 24/285 (8%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQ 150
N S + ++G G FG V G + K +VA+K L + + R ++L E +GQ
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 151 LRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLA 210
HP+++RL G + + ++V E+M GSL++ L K + + G A G+
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMK 161
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGT-YGYAAP 269
+L ++ ++RD NIL++S+ K+SDFGL+++ + TTR + +P
Sbjct: 162 YL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 270 EYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIV 329
E I+ T+ SDV+S+G+VL E+++ RP E + D K + RL +
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGE-----RPYWEMSNQDVIKA-VDEGYRLPPPM 273
Query: 330 DPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL 374
D A + L L C + +RPK +V+ L+ L+
Sbjct: 274 DCPAA----------LYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 24/285 (8%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQ 150
N S + ++G G FG V G + K +VA+K L + + R ++L E +GQ
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 151 LRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLA 210
HP+++RL G + + ++V E+M GSL++ L K + + G A G+
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMK 161
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGT-YGYAAP 269
+L ++ ++RD NIL++S+ K+SDFGL+++ + TTR + +P
Sbjct: 162 YL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 270 EYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIV 329
E I+ T+ SDV+S+G+VL E+++ RP E + D K + RL +
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGE-----RPYWEMSNQDVIKA-VDEGYRLPPPM 273
Query: 330 DPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL 374
D A + L L C + +RPK +V+ L+ L+
Sbjct: 274 DCPAA----------LYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 24/285 (8%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQ 150
N S + ++G G FG V G + K +VA+K L + + R ++L E +GQ
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 151 LRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLA 210
HP+++RL G + + ++V E+M GSL++ L K + + G A G+
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMK 161
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGT-YGYAAP 269
+L ++ ++RD NIL++S+ K+SDFGL+++ + TTR + +P
Sbjct: 162 YL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 270 EYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIV 329
E I+ T+ SDV+S+G+VL E+++ RP E + D K + RL +
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGE-----RPYWEMSNQDVIKA-VDEGYRLPPPM 273
Query: 330 DPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL 374
D A + L L C + +RPK +V+ L+ L+
Sbjct: 274 DCPAA----------LYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 127/287 (44%), Gaps = 32/287 (11%)
Query: 96 NYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPH 155
N ++G G FG V+ G + D+ G K L I + ++L E I + HP+
Sbjct: 27 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 156 LVRLIGYCCEDE-ERLLVYEFMPRGSLENHLFKRISVSLPWGTRL-KIAIGAAKGLAFLH 213
++ L+G C E L+V +M G L N F R P L + AKG+ +L
Sbjct: 85 VLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKYL- 141
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK--MGPEGSNTHVTTRVMGTYGYAAPEY 271
A ++RD N +LD FT K++DFGLA+ E + H T + A E
Sbjct: 142 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 200
Query: 272 ISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRL---RYI 328
+ T TTKSDV+SFGV+L EL+T P + N D YL RRL Y
Sbjct: 201 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFD-ITVYLLQGRRLLQPEYC 254
Query: 329 VDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
DP + + L+C + RP + +V+ + ++ +
Sbjct: 255 PDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFS 288
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 137/285 (48%), Gaps = 24/285 (8%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQ 150
N S + ++G G FG V G + K +VA+K L + + R ++L E +GQ
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 151 LRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLA 210
HP+++RL G + + ++V E+M GSL++ L K + + G A G+
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMK 161
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGT-YGYAAP 269
+L ++ ++RD NIL++S+ K+SDFGL+++ + TTR + +P
Sbjct: 162 YL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 270 EYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIV 329
E I+ T+ SDV+S+G+VL E+++ RP E + D K + RL +
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGE-----RPYWEMSNQDVIKA-VDEGYRLPPPM 273
Query: 330 DPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL 374
D A + L L C + +RPK +V+ L+ L+
Sbjct: 274 DCPAA----------LYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 127/287 (44%), Gaps = 32/287 (11%)
Query: 96 NYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPH 155
N ++G G FG V+ G + D+ G K L I + ++L E I + HP+
Sbjct: 54 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 156 LVRLIGYCCEDE-ERLLVYEFMPRGSLENHLFKRISVSLPWGTRL-KIAIGAAKGLAFLH 213
++ L+G C E L+V +M G L N F R P L + AKG+ +L
Sbjct: 112 VLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKYL- 168
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK--MGPEGSNTHVTTRVMGTYGYAAPEY 271
A ++RD N +LD FT K++DFGLA+ E + H T + A E
Sbjct: 169 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 227
Query: 272 ISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRL---RYI 328
+ T TTKSDV+SFGV+L EL+T P + N D YL RRL Y
Sbjct: 228 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFD-ITVYLLQGRRLLQPEYC 281
Query: 329 VDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
DP + + L+C + RP + +V+ + ++ +
Sbjct: 282 PDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFS 315
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 139/285 (48%), Gaps = 24/285 (8%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQ 150
N S + ++G G FG V G + ++ + +VA+K L + + R ++L E +GQ
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEI---SVAIKTLKVGYTEKQRRDFLGEASIMGQ 73
Query: 151 LRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLA 210
HP+++RL G + + ++V E+M GSL++ L K + + G A G+
Sbjct: 74 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMK 132
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGT-YGYAAP 269
+L ++ ++RD NIL++S+ K+SDFGL+++ + TTR + +P
Sbjct: 133 YL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 190
Query: 270 EYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIV 329
E I+ T+ SDV+S+G+VL E+++ RP E + D K + RL +
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMSYGE-----RPYWEMSNQDVIKA-VDEGYRLPPPM 244
Query: 330 DPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL 374
D A + L L C + +RPK +V+ L+ L+
Sbjct: 245 DCPAA----------LYQLMLDCWQKDRNNRPKFEQIVSILDKLI 279
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 138/286 (48%), Gaps = 26/286 (9%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQ 150
N S + ++G G FG V G + + K +VA+K L + + R ++L E +GQ
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKLPSK---KEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 90
Query: 151 LRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLA 210
HP+++RL G + + ++V E+M GSL++ L K + + G A G+
Sbjct: 91 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMK 149
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGT-YGYAAP 269
+L ++ ++RD NIL++S+ K+SDFGL+++ + TTR + +P
Sbjct: 150 YL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 207
Query: 270 EYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYI 328
E I+ T+ SDV+S+G+VL E+++ G R ++ + VD RL
Sbjct: 208 EAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-------EGYRLPPP 260
Query: 329 VDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL 374
+D A + L L C + +RPK +V+ L+ L+
Sbjct: 261 MDCPAA----------LYQLMLDCWQKDRNNRPKFEQIVSILDKLI 296
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 103/213 (48%), Gaps = 18/213 (8%)
Query: 93 FSSNYL-----LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL-DIEGLQGHREWLAEVI 146
F YL LGEG FG V Y D G + VAVK L + G Q W E+
Sbjct: 6 FHKRYLKKIRDLGEGHFGKV-SLYCYDPTNDG-TGEMVAVKALKEGCGPQLRSGWQREIE 63
Query: 147 FLGQLRHPHLVRLIGYCCEDEER---LLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAI 203
L L H H+V+ G CCED+ LV E++P GSL ++L R V L L A
Sbjct: 64 ILRTLYHEHIVKYKG-CCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGL--AQLLLFAQ 119
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTH-VTTRVMG 262
+G+A+LH I+R N+LLD+D K+ DFGLAK PEG + V
Sbjct: 120 QICEGMAYLHAQH--YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDS 177
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE + SDV+SFGV L ELLT
Sbjct: 178 PVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 127/287 (44%), Gaps = 32/287 (11%)
Query: 96 NYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPH 155
N ++G G FG V+ G + D+ G K L I + ++L E I + HP+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 156 LVRLIGYCCEDE-ERLLVYEFMPRGSLENHLFKRISVSLPWGTRL-KIAIGAAKGLAFLH 213
++ L+G C E L+V +M G L N F R P L + AKG+ +L
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKYL- 149
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK--MGPEGSNTHVTTRVMGTYGYAAPEY 271
A ++RD N +LD FT K++DFGLA+ E + H T + A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 272 ISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRL---RYI 328
+ T TTKSDV+SFGV+L EL+T P + N D YL RRL Y
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFD-ITVYLLQGRRLLQPEYC 262
Query: 329 VDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
DP + + L+C + RP + +V+ + ++ +
Sbjct: 263 PDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFS 296
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 139/292 (47%), Gaps = 41/292 (14%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQLRHPHL 156
++G G FG V+KG + G K VA+K L + R ++L E +GQ H ++
Sbjct: 51 VIGAGEFGEVYKGMLKTS--SGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKR---ISVSLPWGTRLKIAIGAAKGLAFLH 213
+RL G + + +++ E+M G+L+ L ++ SV G + G A G+ +L
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVG----MLRGIAAGMKYL- 163
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKM---GPEGSNTHVTTRVMGTYGYAAPE 270
A ++RD NIL++S+ K+SDFGL+++ PE + T ++ + APE
Sbjct: 164 -ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI--PIRWTAPE 220
Query: 271 YISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSEQNLVDWAKPY--LRSSRRLRY 327
IS T+ SDV+SFG+V+ E++T G R PY L + ++
Sbjct: 221 AISYRKFTSASDVWSFGIVMWEVMTYGER------------------PYWELSNHEVMKA 262
Query: 328 IVDP-RLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLNLKD 378
I D RL A + L +QC RPK A +V+ L+ L+ D
Sbjct: 263 INDGFRLPTPMDCPSA--IYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 127/287 (44%), Gaps = 32/287 (11%)
Query: 96 NYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPH 155
N ++G G FG V+ G + D+ G K L I + ++L E I + HP+
Sbjct: 30 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 156 LVRLIGYCCEDE-ERLLVYEFMPRGSLENHLFKRISVSLPWGTRL-KIAIGAAKGLAFLH 213
++ L+G C E L+V +M G L N F R P L + AKG+ +L
Sbjct: 88 VLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKYL- 144
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK--MGPEGSNTHVTTRVMGTYGYAAPEY 271
A ++RD N +LD FT K++DFGLA+ E + H T + A E
Sbjct: 145 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 203
Query: 272 ISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRL---RYI 328
+ T TTKSDV+SFGV+L EL+T P + N D YL RRL Y
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFD-ITVYLLQGRRLLQPEYC 257
Query: 329 VDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
DP + + L+C + RP + +V+ + ++ +
Sbjct: 258 PDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 127/287 (44%), Gaps = 32/287 (11%)
Query: 96 NYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPH 155
N ++G G FG V+ G + D+ G K L I + ++L E I + HP+
Sbjct: 33 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 156 LVRLIGYCCEDE-ERLLVYEFMPRGSLENHLFKRISVSLPWGTRL-KIAIGAAKGLAFLH 213
++ L+G C E L+V +M G L N F R P L + AKG+ +L
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKYL- 147
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK--MGPEGSNTHVTTRVMGTYGYAAPEY 271
A ++RD N +LD FT K++DFGLA+ E + H T + A E
Sbjct: 148 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 206
Query: 272 ISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRL---RYI 328
+ T TTKSDV+SFGV+L EL+T P + N D YL RRL Y
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFD-ITVYLLQGRRLLQPEYC 260
Query: 329 VDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
DP + + L+C + RP + +V+ + ++ +
Sbjct: 261 PDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFS 294
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 127/287 (44%), Gaps = 32/287 (11%)
Query: 96 NYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPH 155
N ++G G FG V+ G + D+ G K L I + ++L E I + HP+
Sbjct: 32 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 156 LVRLIGYCCEDE-ERLLVYEFMPRGSLENHLFKRISVSLPWGTRL-KIAIGAAKGLAFLH 213
++ L+G C E L+V +M G L N F R P L + AKG+ +L
Sbjct: 90 VLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKYL- 146
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK--MGPEGSNTHVTTRVMGTYGYAAPEY 271
A ++RD N +LD FT K++DFGLA+ E + H T + A E
Sbjct: 147 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 205
Query: 272 ISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRL---RYI 328
+ T TTKSDV+SFGV+L EL+T P + N D YL RRL Y
Sbjct: 206 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFD-ITVYLLQGRRLLQPEYC 259
Query: 329 VDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
DP + + L+C + RP + +V+ + ++ +
Sbjct: 260 PDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFS 293
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 127/287 (44%), Gaps = 32/287 (11%)
Query: 96 NYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPH 155
N ++G G FG V+ G + D+ G K L I + ++L E I + HP+
Sbjct: 34 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 156 LVRLIGYCCEDE-ERLLVYEFMPRGSLENHLFKRISVSLPWGTRL-KIAIGAAKGLAFLH 213
++ L+G C E L+V +M G L N F R P L + AKG+ +L
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKYL- 148
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK--MGPEGSNTHVTTRVMGTYGYAAPEY 271
A ++RD N +LD FT K++DFGLA+ E + H T + A E
Sbjct: 149 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 207
Query: 272 ISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRL---RYI 328
+ T TTKSDV+SFGV+L EL+T P + N D YL RRL Y
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFD-ITVYLLQGRRLLQPEYC 261
Query: 329 VDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
DP + + L+C + RP + +V+ + ++ +
Sbjct: 262 PDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFS 295
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 127/287 (44%), Gaps = 32/287 (11%)
Query: 96 NYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPH 155
N ++G G FG V+ G + D+ G K L I + ++L E I + HP+
Sbjct: 53 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 110
Query: 156 LVRLIGYCCEDE-ERLLVYEFMPRGSLENHLFKRISVSLPWGTRL-KIAIGAAKGLAFLH 213
++ L+G C E L+V +M G L N F R P L + AKG+ +L
Sbjct: 111 VLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKYL- 167
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK--MGPEGSNTHVTTRVMGTYGYAAPEY 271
A ++RD N +LD FT K++DFGLA+ E + H T + A E
Sbjct: 168 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 226
Query: 272 ISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRL---RYI 328
+ T TTKSDV+SFGV+L EL+T P + N D YL RRL Y
Sbjct: 227 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFD-ITVYLLQGRRLLQPEYC 280
Query: 329 VDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
DP + + L+C + RP + +V+ + ++ +
Sbjct: 281 PDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFS 314
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 127/287 (44%), Gaps = 32/287 (11%)
Query: 96 NYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPH 155
N ++G G FG V+ G + D+ G K L I + ++L E I + HP+
Sbjct: 35 NEVIGRGHFGCVYHGTLLDN--DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 156 LVRLIGYCCEDE-ERLLVYEFMPRGSLENHLFKRISVSLPWGTRL-KIAIGAAKGLAFLH 213
++ L+G C E L+V +M G L N F R P L + AKG+ +L
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRN--FIRNETHNPTVKDLIGFGLQVAKGMKYL- 149
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK--MGPEGSNTHVTTRVMGTYGYAAPEY 271
A ++RD N +LD FT K++DFGLA+ E + H T + A E
Sbjct: 150 -ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 272 ISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRL---RYI 328
+ T TTKSDV+SFGV+L EL+T P + N D YL RRL Y
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFD-ITVYLLQGRRLLQPEYC 262
Query: 329 VDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
DP + + L+C + RP + +V+ + ++ +
Sbjct: 263 PDP-------------LYEVMLKCWHPKAEMRPSFSELVSRISAIFS 296
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 136/285 (47%), Gaps = 24/285 (8%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQ 150
N S + ++G G FG V G + K +VA+K L + + R ++L E +GQ
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 151 LRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLA 210
HP+++RL G + + ++V E+M GSL++ L K + + G A G+
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMK 161
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGT-YGYAAP 269
+L ++ ++RD NIL++S+ K+SDFGL ++ + TTR + +P
Sbjct: 162 YL--SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 270 EYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIV 329
E I+ T+ SDV+S+G+VL E+++ RP E + D K + RL +
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGE-----RPYWEMSNQDVIKA-VDEGYRLPPPM 273
Query: 330 DPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL 374
D A + L L C + +RPK +V+ L+ L+
Sbjct: 274 DCPAA----------LYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 136/285 (47%), Gaps = 24/285 (8%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQ 150
N S + ++G G FG V G + K +VA+K L + + R ++L E +GQ
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 151 LRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLA 210
HP+++RL G + + ++V E M GSL++ L K + + G A G+
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMK 161
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGT-YGYAAP 269
+L ++ ++RD NIL++S+ K+SDFGL+++ + TTR + +P
Sbjct: 162 YL--SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 270 EYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIV 329
E I+ T+ SDV+S+G+VL E+++ RP E + D K + RL +
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGE-----RPYWEMSNQDVIKA-VDEGYRLPPPM 273
Query: 330 DPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL 374
D A + L L C + +RPK +V+ L+ L+
Sbjct: 274 DCPAA----------LYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 107/208 (51%), Gaps = 22/208 (10%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQLRHPHL 156
++G G FG V +G + G K VA+K L + R E+L+E +GQ HP++
Sbjct: 23 VIGAGEFGEVCRGRLK---APGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 79
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHL------FKRISVSLPWGTRLKIAIGAAKGLA 210
+RL G +++ EFM G+L++ L F I + + + G A G+
Sbjct: 80 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL-------VGMLRGIASGMR 132
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG---TYGYA 267
+L AE ++RD NIL++S+ K+SDFGL++ E S+ T +G +
Sbjct: 133 YL--AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWT 190
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLT 295
APE I+ T+ SD +S+G+V+ E+++
Sbjct: 191 APEAIAFRKFTSASDAWSYGIVMWEVMS 218
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 107/208 (51%), Gaps = 22/208 (10%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQLRHPHL 156
++G G FG V +G + G K VA+K L + R E+L+E +GQ HP++
Sbjct: 21 VIGAGEFGEVCRGRLK---APGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHL------FKRISVSLPWGTRLKIAIGAAKGLA 210
+RL G +++ EFM G+L++ L F I + + + G A G+
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL-------VGMLRGIASGMR 130
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG---TYGYA 267
+L AE ++RD NIL++S+ K+SDFGL++ E S+ T +G +
Sbjct: 131 YL--AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWT 188
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLT 295
APE I+ T+ SD +S+G+V+ E+++
Sbjct: 189 APEAIAFRKFTSASDAWSYGIVMWEVMS 216
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 136/285 (47%), Gaps = 24/285 (8%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQ 150
N S + ++G G FG V G + K +VA+K L + + R ++L E +GQ
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLK---LPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQ 102
Query: 151 LRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLA 210
HP+++RL G + + ++V E M GSL++ L K + + G A G+
Sbjct: 103 FDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMK 161
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGT-YGYAAP 269
+L ++ ++RD NIL++S+ K+SDFGL+++ + TTR + +P
Sbjct: 162 YL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 270 EYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIV 329
E I+ T+ SDV+S+G+VL E+++ RP E + D K + RL +
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMSYGE-----RPYWEMSNQDVIKA-VDEGYRLPPPM 273
Query: 330 DPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL 374
D A + L L C + +RPK +V+ L+ L+
Sbjct: 274 DCPAA----------LYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 138/285 (48%), Gaps = 24/285 (8%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQ 150
N S + ++G G FG V G + ++ + +VA+K L + + R ++L E +GQ
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEI---SVAIKTLKVGYTEKQRRDFLGEASIMGQ 73
Query: 151 LRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLA 210
HP+++RL G + + ++V E M GSL++ L K + + G A G+
Sbjct: 74 FDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMK 132
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGT-YGYAAP 269
+L ++ ++RD NIL++S+ K+SDFGL+++ + TTR + +P
Sbjct: 133 YL--SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 190
Query: 270 EYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIV 329
E I+ T+ SDV+S+G+VL E+++ RP E + D K + RL +
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMSYGE-----RPYWEMSNQDVIKA-VDEGYRLPPPM 244
Query: 330 DPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL 374
D A + L L C + +RPK +V+ L+ L+
Sbjct: 245 DCPAA----------LYQLMLDCWQKDRNNRPKFEQIVSILDKLI 279
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 28/290 (9%)
Query: 96 NYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIE-GLQGHREWLAEVIFLGQLRHP 154
N +LGEG FG V++G + +G K VAVK + L ++++E + + L HP
Sbjct: 29 NRILGEGFFGEVYEGVYTN--HKGEKIN-VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHP 85
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
H+V+LIG E+E ++ E P G L H +R SL T + ++ K +A+L
Sbjct: 86 HIVKLIG-IIEEEPTWIIMELYPYGEL-GHYLERNKNSLKVLTLVLYSLQICKAMAYLES 143
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
++RD NIL+ S KL DFGL++ E + + + + +PE I+
Sbjct: 144 IN--CVHRDIAVRNILVASPECVKLGDFGLSRY-IEDEDYYKASVTRLPIKWMSPESINF 200
Query: 275 GHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRL 333
TT SDV+ F V + E+L+ G++ L K + L RL P L
Sbjct: 201 RRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGV-------LEKGDRLP---KPDL 250
Query: 334 AGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLNL-KDMAVS 382
+ L +C +P DRP+ +V +L + + KD+A+
Sbjct: 251 C-------PPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIAME 293
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 28/290 (9%)
Query: 96 NYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIE-GLQGHREWLAEVIFLGQLRHP 154
N +LGEG FG V++G + +G K VAVK + L ++++E + + L HP
Sbjct: 13 NRILGEGFFGEVYEGVYTN--HKGEKIN-VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHP 69
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
H+V+LIG E+E ++ E P G L H +R SL T + ++ K +A+L
Sbjct: 70 HIVKLIG-IIEEEPTWIIMELYPYGEL-GHYLERNKNSLKVLTLVLYSLQICKAMAYLES 127
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
++RD NIL+ S KL DFGL++ E + + + + +PE I+
Sbjct: 128 IN--CVHRDIAVRNILVASPECVKLGDFGLSRY-IEDEDYYKASVTRLPIKWMSPESINF 184
Query: 275 GHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRL 333
TT SDV+ F V + E+L+ G++ L K + L RL P L
Sbjct: 185 RRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGV-------LEKGDRLP---KPDL 234
Query: 334 AGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLNL-KDMAVS 382
+ L +C +P DRP+ +V +L + + KD+A+
Sbjct: 235 C-------PPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIAME 277
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 28/290 (9%)
Query: 96 NYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIE-GLQGHREWLAEVIFLGQLRHP 154
N +LGEG FG V++G + +G K VAVK + L ++++E + + L HP
Sbjct: 17 NRILGEGFFGEVYEGVYTN--HKGEKIN-VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHP 73
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
H+V+LIG E+E ++ E P G L H +R SL T + ++ K +A+L
Sbjct: 74 HIVKLIG-IIEEEPTWIIMELYPYGEL-GHYLERNKNSLKVLTLVLYSLQICKAMAYLES 131
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
++RD NIL+ S KL DFGL++ E + + + + +PE I+
Sbjct: 132 IN--CVHRDIAVRNILVASPECVKLGDFGLSRY-IEDEDYYKASVTRLPIKWMSPESINF 188
Query: 275 GHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRL 333
TT SDV+ F V + E+L+ G++ L K + L RL P L
Sbjct: 189 RRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGV-------LEKGDRLP---KPDL 238
Query: 334 AGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLNL-KDMAVS 382
+ L +C +P DRP+ +V +L + + KD+A+
Sbjct: 239 C-------PPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKDIAME 281
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 115/228 (50%), Gaps = 43/228 (18%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL------DI-EGLQGHREWLAEVIFLGQ 150
++G GGFG V++ + D VAVK DI + ++ R+ E
Sbjct: 14 IIGIGGFGKVYRAFWIGD--------EVAVKAARHDPDEDISQTIENVRQ---EAKLFAM 62
Query: 151 LRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLF-KRISVSLPWGTRLKIAIGAAKGL 209
L+HP+++ L G C ++ LV EF G L L KRI P + A+ A+G+
Sbjct: 63 LKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRI----PPDILVNWAVQIARGM 118
Query: 210 AFLHG-AENPVIYRDFKTSNILL-----DSDFT---AKLSDFGLAKMGPEGSNTHVTTRV 260
+LH A P+I+RD K+SNIL+ + D + K++DFGLA+ H TT++
Sbjct: 119 NYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR------EWHRTTKM 172
Query: 261 --MGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGR---RSMDKL 303
G Y + APE I + SDV+S+GV+L ELLTG R +D L
Sbjct: 173 SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL 220
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 137/292 (46%), Gaps = 32/292 (10%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQLRHPHL 156
++G G FG V G++ G + VA+K L + R ++L+E +GQ HP++
Sbjct: 40 VIGAGEFGEVCSGHLK---LPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 96
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
+ L G + +++ EFM GSL++ L ++ + + G A G+ +L A+
Sbjct: 97 IHLEGVVTKSTPVMIITEFMENGSLDSFL-RQNDGQFTVIQLVGMLRGIAAGMKYL--AD 153
Query: 217 NPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG---TYGYAAPEYIS 273
++RD NIL++S+ K+SDFGL++ + ++ T +G + APE I
Sbjct: 154 MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 213
Query: 274 TGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPR 332
T+ SDV+S+G+V+ E+++ G R + + N ++ D R
Sbjct: 214 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE---------------QDYR 258
Query: 333 LAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL----NLKDMA 380
L A + L L C + RPK +V TL+ ++ +LK MA
Sbjct: 259 LPPPMDCPSA--LHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPNSLKAMA 308
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 133/285 (46%), Gaps = 32/285 (11%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V++G ++ + + + + ++ E+L E + + H+VR
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHL------FKRISVSLP--WGTRLKIAIGAAKGLA 210
L+G + + L++ E M RG L+++L + V P +++A A G+A
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE 270
+L+ N ++RD N ++ DFT K+ DFG+ + E + + + +PE
Sbjct: 138 YLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPE 195
Query: 271 YISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPY--LRSSRRLRYI 328
+ G TT SDV+SFGVVL E+ T +EQ PY L + + LR++
Sbjct: 196 SLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-------PYQGLSNEQVLRFV 238
Query: 329 VDPRLAGQYSVKGAKEMAV-LALQCISVNPKDRPKMAAVVATLES 372
++ L + +M + L C NPK RP ++++++
Sbjct: 239 MEGGLLDKPD--NCPDMLLELMRMCWQYNPKMRPSFLEIISSIKE 281
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 131/283 (46%), Gaps = 30/283 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V++G ++ + + + + ++ E+L E + + H+VR
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHL------FKRISVSLP--WGTRLKIAIGAAKGLA 210
L+G + + L++ E M RG L+++L + V P +++A A G+A
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE 270
+L+ N ++RD N ++ DFT K+ DFG+ + E + + + +PE
Sbjct: 147 YLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPE 204
Query: 271 YISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPY--LRSSRRLRYI 328
+ G TT SDV+SFGVVL E+ T +EQ PY L + + LR++
Sbjct: 205 SLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-------PYQGLSNEQVLRFV 247
Query: 329 VDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLE 371
++ L + + L C NPK RP ++++++
Sbjct: 248 MEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 113/221 (51%), Gaps = 24/221 (10%)
Query: 81 FQLSELRAITQNFSSNYLLGEGGFGTVHKG-YIDDDLRQGLKAQAVAVKLLDIEGLQGHR 139
F+ +ELR + +LG G FGTVHKG +I + + +K + D G Q +
Sbjct: 28 FKETELRKLK-------VLGSGVFGTVHKGVWIPEG--ESIKIPVCIKVIEDKSGRQSFQ 78
Query: 140 EWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKR-----ISVSLP 194
++ +G L H H+VRL+G C +L V +++P GSL +H+ + + L
Sbjct: 79 AVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLN 137
Query: 195 WGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNT 254
WG ++ AKG+ +L E+ +++R+ N+LL S +++DFG+A + P
Sbjct: 138 WGVQI------AKGMYYLE--EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 189
Query: 255 HVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ + + A E I G T +SDV+S+GV + EL+T
Sbjct: 190 LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 125/287 (43%), Gaps = 28/287 (9%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLV 157
+LGEG FG+V +G + + LK AV LD + E+L+E + HP+++
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKV-AVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 158 RLIGYCCEDEER-----LLVYEFMPRGSLENH-LFKRISVS---LPWGTRLKIAIGAAKG 208
RL+G C E + +++ FM G L + L+ R+ +P T LK + A G
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
+ +L + ++RD N +L D T ++DFGL+K G + A
Sbjct: 160 MEYL--SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIA 217
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYI 328
E ++ T+KSDV++FGV + E+ T R M + D YL RL+
Sbjct: 218 IESLADRVYTSKSDVWAFGVTMWEIAT--RGMTPYPGVQNHEMYD----YLLHGHRLKQP 271
Query: 329 VDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
D E+ + C +P DRP + + LE LL
Sbjct: 272 ED----------CLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 113/221 (51%), Gaps = 24/221 (10%)
Query: 81 FQLSELRAITQNFSSNYLLGEGGFGTVHKG-YIDDDLRQGLKAQAVAVKLLDIEGLQGHR 139
F+ +ELR + +LG G FGTVHKG +I + + +K + D G Q +
Sbjct: 10 FKETELRKLK-------VLGSGVFGTVHKGVWIPEG--ESIKIPVCIKVIEDKSGRQSFQ 60
Query: 140 EWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKR-----ISVSLP 194
++ +G L H H+VRL+G C +L V +++P GSL +H+ + + L
Sbjct: 61 AVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLN 119
Query: 195 WGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNT 254
WG ++ AKG+ +L E+ +++R+ N+LL S +++DFG+A + P
Sbjct: 120 WGVQI------AKGMYYLE--EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 171
Query: 255 HVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ + + A E I G T +SDV+S+GV + EL+T
Sbjct: 172 LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 139/311 (44%), Gaps = 37/311 (11%)
Query: 71 AHTFGPDLYDFQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL 130
A F PD E + + + LG+G FG V++G ++ + + +
Sbjct: 3 ADVFVPD-------EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN 55
Query: 131 DIEGLQGHREWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHL----- 185
+ ++ E+L E + + H+VRL+G + + L++ E M RG L+++L
Sbjct: 56 EAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRP 115
Query: 186 -FKRISVSLP--WGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDF 242
+ V P +++A A G+A+L+ N ++RD N ++ DFT K+ DF
Sbjct: 116 EMENNPVLAPPSLSKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDF 173
Query: 243 GLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDK 302
G+ + E + + + +PE + G TT SDV+SFGVVL E+ T
Sbjct: 174 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT------- 226
Query: 303 LRPKSEQNLVDWAKPY--LRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDR 360
+EQ PY L + + LR++++ L + + L C NPK R
Sbjct: 227 ---LAEQ-------PYQGLSNEQVLRFVMEGGLLDKPD-NCPDMLFELMRMCWQYNPKMR 275
Query: 361 PKMAAVVATLE 371
P ++++++
Sbjct: 276 PSFLEIISSIK 286
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 131/283 (46%), Gaps = 30/283 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V++G ++ + + + + ++ E+L E + + H+VR
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHL------FKRISVSLP--WGTRLKIAIGAAKGLA 210
L+G + + L++ E M RG L+++L + V P +++A A G+A
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE 270
+L+ N ++RD N ++ DFT K+ DFG+ + E + + + +PE
Sbjct: 146 YLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 203
Query: 271 YISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPY--LRSSRRLRYI 328
+ G TT SDV+SFGVVL E+ T +EQ PY L + + LR++
Sbjct: 204 SLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-------PYQGLSNEQVLRFV 246
Query: 329 VDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLE 371
++ L + + L C NPK RP ++++++
Sbjct: 247 MEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 288
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 131/283 (46%), Gaps = 30/283 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V++G ++ + + + + ++ E+L E + + H+VR
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHL------FKRISVSLP--WGTRLKIAIGAAKGLA 210
L+G + + L++ E M RG L+++L + V P +++A A G+A
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE 270
+L+ N ++RD N ++ DFT K+ DFG+ + E + + + +PE
Sbjct: 140 YLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 197
Query: 271 YISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPY--LRSSRRLRYI 328
+ G TT SDV+SFGVVL E+ T +EQ PY L + + LR++
Sbjct: 198 SLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-------PYQGLSNEQVLRFV 240
Query: 329 VDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLE 371
++ L + + L C NPK RP ++++++
Sbjct: 241 MEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 282
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 130/282 (46%), Gaps = 30/282 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V++G ++ + + + + ++ E+L E + + H+VR
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHL------FKRISVSLP--WGTRLKIAIGAAKGLA 210
L+G + + L++ E M RG L+++L + V P +++A A G+A
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE 270
+L+ N ++RD N ++ DFT K+ DFG+ + E + + + +PE
Sbjct: 153 YLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 210
Query: 271 YISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPY--LRSSRRLRYI 328
+ G TT SDV+SFGVVL E+ T +EQ PY L + + LR++
Sbjct: 211 SLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-------PYQGLSNEQVLRFV 253
Query: 329 VDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATL 370
++ L + + L C NPK RP +++++
Sbjct: 254 MEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSI 294
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 131/283 (46%), Gaps = 30/283 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V++G ++ + + + + ++ E+L E + + H+VR
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHL------FKRISVSLP--WGTRLKIAIGAAKGLA 210
L+G + + L++ E M RG L+++L + V P +++A A G+A
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE 270
+L+ N ++RD N ++ DFT K+ DFG+ + E + + + +PE
Sbjct: 146 YLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 203
Query: 271 YISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPY--LRSSRRLRYI 328
+ G TT SDV+SFGVVL E+ T +EQ PY L + + LR++
Sbjct: 204 SLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-------PYQGLSNEQVLRFV 246
Query: 329 VDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLE 371
++ L + + L C NPK RP ++++++
Sbjct: 247 MEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 288
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 131/283 (46%), Gaps = 30/283 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V++G ++ + + + + ++ E+L E + + H+VR
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHL------FKRISVSLP--WGTRLKIAIGAAKGLA 210
L+G + + L++ E M RG L+++L + V P +++A A G+A
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE 270
+L+ N ++RD N ++ DFT K+ DFG+ + E + + + +PE
Sbjct: 147 YLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 204
Query: 271 YISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPY--LRSSRRLRYI 328
+ G TT SDV+SFGVVL E+ T +EQ PY L + + LR++
Sbjct: 205 SLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-------PYQGLSNEQVLRFV 247
Query: 329 VDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLE 371
++ L + + L C NPK RP ++++++
Sbjct: 248 MEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 289
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 129/282 (45%), Gaps = 39/282 (13%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLV 157
++G G FG V K +A+ VA+K IE + ++ E+ L ++ HP++V
Sbjct: 16 VVGRGAFGVVCKA--------KWRAKDVAIK--QIESESERKAFIVELRQLSRVNHPNIV 65
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTR---LKIAIGAAKGLAFLHG 214
+L G C LV E+ GSL N L + LP+ T + + ++G+A+LH
Sbjct: 66 KLYGACLNP--VCLVMEYAEGGSLYNVLHG--AEPLPYYTAAHAMSWCLQCSQGVAYLHS 121
Query: 215 AE-NPVIYRDFKTSNILLDSDFTA-KLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYI 272
+ +I+RD K N+LL + T K+ DFG A TH+T G+ + APE
Sbjct: 122 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC----DIQTHMTNN-KGSAAWMAPEVF 176
Query: 273 STGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPR 332
+ + K DV+S+G++L E++T R+ D++ P R + P
Sbjct: 177 EGSNYSEKCDVFSWGIILWEVITRRKPFDEI-----------GGPAFRIMWAVHNGTRPP 225
Query: 333 LAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL 374
L K + L +C S +P RP M +V + L+
Sbjct: 226 LIKNLP----KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 263
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 131/283 (46%), Gaps = 30/283 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V++G ++ + + + + ++ E+L E + + H+VR
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHL------FKRISVSLP--WGTRLKIAIGAAKGLA 210
L+G + + L++ E M RG L+++L + V P +++A A G+A
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE 270
+L+ N ++RD N ++ DFT K+ DFG+ + E + + + +PE
Sbjct: 175 YLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 232
Query: 271 YISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPY--LRSSRRLRYI 328
+ G TT SDV+SFGVVL E+ T +EQ PY L + + LR++
Sbjct: 233 SLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-------PYQGLSNEQVLRFV 275
Query: 329 VDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLE 371
++ L + + L C NPK RP ++++++
Sbjct: 276 MEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 317
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 130/283 (45%), Gaps = 30/283 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V++G ++ + + + + ++ E+L E + + H+VR
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHL------FKRISVSLP--WGTRLKIAIGAAKGLA 210
L+G + + L++ E M RG L+++L V P +++A A G+A
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE 270
+L+ N ++RD N ++ DFT K+ DFG+ + E + + + +PE
Sbjct: 153 YLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 210
Query: 271 YISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPY--LRSSRRLRYI 328
+ G TT SDV+SFGVVL E+ T +EQ PY L + + LR++
Sbjct: 211 SLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-------PYQGLSNEQVLRFV 253
Query: 329 VDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLE 371
++ L + + L C NPK RP ++++++
Sbjct: 254 MEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 295
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 129/282 (45%), Gaps = 39/282 (13%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLV 157
++G G FG V K +A+ VA+K IE + ++ E+ L ++ HP++V
Sbjct: 15 VVGRGAFGVVCKA--------KWRAKDVAIK--QIESESERKAFIVELRQLSRVNHPNIV 64
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTR---LKIAIGAAKGLAFLHG 214
+L G C LV E+ GSL N L + LP+ T + + ++G+A+LH
Sbjct: 65 KLYGACLNP--VCLVMEYAEGGSLYNVLHG--AEPLPYYTAAHAMSWCLQCSQGVAYLHS 120
Query: 215 AE-NPVIYRDFKTSNILLDSDFTA-KLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYI 272
+ +I+RD K N+LL + T K+ DFG A TH+T G+ + APE
Sbjct: 121 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC----DIQTHMTNN-KGSAAWMAPEVF 175
Query: 273 STGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPR 332
+ + K DV+S+G++L E++T R+ D++ P R + P
Sbjct: 176 EGSNYSEKCDVFSWGIILWEVITRRKPFDEI-----------GGPAFRIMWAVHNGTRPP 224
Query: 333 LAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL 374
L K + L +C S +P RP M +V + L+
Sbjct: 225 LIKNLP----KPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 262
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 130/283 (45%), Gaps = 30/283 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V++G ++ + + + + ++ E+L E + + H+VR
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHL------FKRISVSLP--WGTRLKIAIGAAKGLA 210
L+G + + L++ E M RG L+++L V P +++A A G+A
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE 270
+L+ N ++RD N ++ DFT K+ DFG+ + E + + + +PE
Sbjct: 143 YLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 200
Query: 271 YISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPY--LRSSRRLRYI 328
+ G TT SDV+SFGVVL E+ T +EQ PY L + + LR++
Sbjct: 201 SLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-------PYQGLSNEQVLRFV 243
Query: 329 VDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLE 371
++ L + + L C NPK RP ++++++
Sbjct: 244 MEGGLLDKPD-NCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 285
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 134/288 (46%), Gaps = 32/288 (11%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEG-LQGHREWLAEVIFLGQLRHPHLV 157
LG+G FG V++G D ++ G VAVK ++ L+ E+L E + H+V
Sbjct: 22 LGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHL--FKRISVSLP------WGTRLKIAIGAAKGL 209
RL+G + + L+V E M G L+++L + + + P +++A A G+
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAP 269
A+L+ + ++RD N ++ DFT K+ DFG+ + E + + + AP
Sbjct: 141 AYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 270 EYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPY--LRSSRRLRY 327
E + G TT SD++SFGVVL E+ + +EQ PY L + + L++
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQ-------PYQGLSNEQVLKF 241
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
++D Q + + L C NPK RP +V L+ L+
Sbjct: 242 VMDGGYLDQPD-NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH 288
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 134/288 (46%), Gaps = 32/288 (11%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEG-LQGHREWLAEVIFLGQLRHPHLV 157
LG+G FG V++G D ++ G VAVK ++ L+ E+L E + H+V
Sbjct: 25 LGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHL--FKRISVSLP------WGTRLKIAIGAAKGL 209
RL+G + + L+V E M G L+++L + + + P +++A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAP 269
A+L+ + ++RD N ++ DFT K+ DFG+ + E + + + AP
Sbjct: 144 AYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 270 EYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPY--LRSSRRLRY 327
E + G TT SD++SFGVVL E+ + +EQ PY L + + L++
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQ-------PYQGLSNEQVLKF 244
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
++D Q + + L C NPK RP +V L+ L+
Sbjct: 245 VMDGGYLDQPD-NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH 291
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 137/298 (45%), Gaps = 44/298 (14%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQLRHPHL 156
++G G FG V G++ G + VA+K L + R ++L+E +GQ HP++
Sbjct: 14 VIGAGEFGEVCSGHLK---LPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNV 70
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHL------FKRISVSLPWGTRLKIAIGAAKGLA 210
+ L G + +++ EFM GSL++ L F I + + + G A G+
Sbjct: 71 IHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQL-------VGMLRGIAAGMK 123
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG---TYGYA 267
+L A+ ++R NIL++S+ K+SDFGL++ + ++ T +G +
Sbjct: 124 YL--ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWT 181
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSEQNLVDWAKPYLRSSRRLR 326
APE I T+ SDV+S+G+V+ E+++ G R + + N ++
Sbjct: 182 APEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE------------- 228
Query: 327 YIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL----NLKDMA 380
D RL A + L L C + RPK +V TL+ ++ +LK MA
Sbjct: 229 --QDYRLPPPMDCPSA--LHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPNSLKAMA 282
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 132/285 (46%), Gaps = 32/285 (11%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V++G ++ + + + + ++ E+L E + + H+VR
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHL------FKRISVSLP--WGTRLKIAIGAAKGLA 210
L+G + + L++ E M RG L+++L + V P +++A A G+A
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE 270
+L+ N ++RD N + DFT K+ DFG+ + E + + + +PE
Sbjct: 140 YLNA--NKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 197
Query: 271 YISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPY--LRSSRRLRYI 328
+ G TT SDV+SFGVVL E+ T +EQ PY L + + LR++
Sbjct: 198 SLKDGVFTTYSDVWSFGVVLWEIAT----------LAEQ-------PYQGLSNEQVLRFV 240
Query: 329 VDPRLAGQYSVKGAKEMAV-LALQCISVNPKDRPKMAAVVATLES 372
++ L + +M + L C NPK RP ++++++
Sbjct: 241 MEGGLLDK--PDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKE 283
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 135/283 (47%), Gaps = 32/283 (11%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGL-QGHREWLAEVIFLGQLRHPHL 156
++G G FG V G + G + VA+K L + R++L+E +GQ HP++
Sbjct: 36 VIGVGEFGEVCSGRLK---VPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 92
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFK---RISVSLPWGTRLKIAIGAAKGLAFLH 213
+ L G + + +++ E+M GSL+ L K R +V G + G G+ +L
Sbjct: 93 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVG----MLRGIGSGMKYL- 147
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGT-YGYAAPEYI 272
++ ++RD NIL++S+ K+SDFG++++ + TTR + APE I
Sbjct: 148 -SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 206
Query: 273 STGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDP 331
+ T+ SDV+S+G+V+ E+++ G R + S Q+++ + RL +D
Sbjct: 207 AYRKFTSASDVWSYGIVMWEVMSYGERPYWDM---SNQDVIK----AIEEGYRLPPPMDC 259
Query: 332 RLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL 374
+A + L L C DRPK +V L+ L+
Sbjct: 260 PIA----------LHQLMLDCWQKERSDRPKFGQIVNMLDKLI 292
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 9/200 (4%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQ-AVAVKLL-DIEGLQGHREWLAEVIFLGQLRHPH 155
+LG G FGTV+KG + +G + VA+K+L + G + + E++ E + + + HPH
Sbjct: 45 VLGSGAFGTVYKGIW---VPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPH 101
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
LVRL+G C + LV + MP G L ++ + ++ L + AKG+ +L
Sbjct: 102 LVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKD-NIGSQLLLNWCVQIAKGMMYLE-- 157
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTG 275
E +++RD N+L+ S K++DFGLA++ + + A E I
Sbjct: 158 ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR 217
Query: 276 HLTTKSDVYSFGVVLLELLT 295
T +SDV+S+GV + EL+T
Sbjct: 218 KFTHQSDVWSYGVTIWELMT 237
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 133/308 (43%), Gaps = 44/308 (14%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH-REWLAEVIFLG 149
+N LGEG FG V K L+ VAVK+L R+ L+E L
Sbjct: 23 KNLVLGKTLGEGEFGKVVKA-TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLK 81
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISV------------------ 191
Q+ HPH+++L G C +D LL+ E+ GSL L + V
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 192 ----SLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKM 247
+L G + A ++G+ +L AE +++RD NIL+ K+SDFGL++
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYL--AEMKLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 248 GPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPK 306
E + ++ + A E + TT+SDV+SFGV+L E++T G + P+
Sbjct: 200 VYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE 259
Query: 307 SEQNLVDWAKPYLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAV 366
NL L++ R+ + ++EM L LQC P RP A +
Sbjct: 260 RLFNL-------LKTGHRM----------ERPDNCSEEMYRLMLQCWKQEPDKRPVFADI 302
Query: 367 VATLESLL 374
LE ++
Sbjct: 303 SKDLEKMM 310
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 133/308 (43%), Gaps = 44/308 (14%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH-REWLAEVIFLG 149
+N LGEG FG V K L+ VAVK+L R+ L+E L
Sbjct: 23 KNLVLGKTLGEGEFGKVVKA-TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLK 81
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISV------------------ 191
Q+ HPH+++L G C +D LL+ E+ GSL L + V
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 192 ----SLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKM 247
+L G + A ++G+ +L AE +++RD NIL+ K+SDFGL++
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYL--AEMSLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 248 GPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPK 306
E + ++ + A E + TT+SDV+SFGV+L E++T G + P+
Sbjct: 200 VYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE 259
Query: 307 SEQNLVDWAKPYLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAV 366
NL L++ R+ + ++EM L LQC P RP A +
Sbjct: 260 RLFNL-------LKTGHRM----------ERPDNCSEEMYRLMLQCWKQEPDKRPVFADI 302
Query: 367 VATLESLL 374
LE ++
Sbjct: 303 SKDLEKMM 310
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 104/200 (52%), Gaps = 9/200 (4%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQ-AVAVKLL-DIEGLQGHREWLAEVIFLGQLRHPH 155
+LG G FGTV+KG + +G + VA+K+L + G + + E++ E + + + HPH
Sbjct: 22 VLGSGAFGTVYKGIW---VPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPH 78
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
LVRL+G C + LV + MP G L ++ + ++ L + AKG+ +L
Sbjct: 79 LVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKD-NIGSQLLLNWCVQIAKGMMYLE-- 134
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTG 275
E +++RD N+L+ S K++DFGLA++ + + A E I
Sbjct: 135 ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR 194
Query: 276 HLTTKSDVYSFGVVLLELLT 295
T +SDV+S+GV + EL+T
Sbjct: 195 KFTHQSDVWSYGVTIWELMT 214
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 91/210 (43%), Gaps = 16/210 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LGEG FG V + L + K VAVK L +++ E L L+H H+VR
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDK-MLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKR-------------ISVSLPWGTRLKIAIGA 205
G C E L+V+E+M G L L L G L +A
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 206 AKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYG 265
A G+ +L G ++RD T N L+ K+ DFG+++ V R M
Sbjct: 139 AAGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 266 YAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ PE I TT+SDV+SFGVVL E+ T
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 91/210 (43%), Gaps = 16/210 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LGEG FG V + L + K VAVK L +++ E L L+H H+VR
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDK-MLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKR-------------ISVSLPWGTRLKIAIGA 205
G C E L+V+E+M G L L L G L +A
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 206 AKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYG 265
A G+ +L G ++RD T N L+ K+ DFG+++ V R M
Sbjct: 145 AAGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 266 YAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ PE I TT+SDV+SFGVVL E+ T
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 133/282 (47%), Gaps = 30/282 (10%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQLRHPHL 156
++G G FG V G + G + AVA+K L + + R ++L E +GQ HP++
Sbjct: 50 VIGAGEFGEVCSGRLK---LPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNV 106
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
V L G + ++V EFM G+L+ L K + + G A G+ +L A+
Sbjct: 107 VHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDG-QFTVIQLVGMLRGIAAGMRYL--AD 163
Query: 217 NPVIYRDFKTSNILLDSDFTAKLSDFGLAKM---GPEGSNTHVTTRVMGTYGYAAPEYIS 273
++RD NIL++S+ K+SDFGL+++ PE T ++ + APE I
Sbjct: 164 MGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKI--PVRWTAPEAIQ 221
Query: 274 TGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPR 332
T+ SDV+S+G+V+ E+++ G R + S Q+++ + RL +D
Sbjct: 222 YRKFTSASDVWSYGIVMWEVMSYGERPYWDM---SNQDVIK----AIEEGYRLPAPMDCP 274
Query: 333 LAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL 374
AG + L L C +RPK +V L+ ++
Sbjct: 275 -AGLHQ---------LMLDCWQKERAERPKFEQIVGILDKMI 306
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 99/199 (49%), Gaps = 15/199 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG V GY ++ + VAVK L G + +L E + L+H LVR
Sbjct: 21 LGAGQFGEVWMGYYNNSTK-------VAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVR 72
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L +E ++ E+M +GSL + L + + + A+G+A++
Sbjct: 73 LYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE--RKN 130
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
I+RD + +N+L+ K++DFGLA++ + T R + + APE I+ G
Sbjct: 131 YIHRDLRAANVLVSESLMCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGC 187
Query: 277 LTTKSDVYSFGVVLLELLT 295
T KSDV+SFG++L E++T
Sbjct: 188 FTIKSDVWSFGILLYEIVT 206
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 100/199 (50%), Gaps = 15/199 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG V GY ++ + VAVK L G + +L E + L+H LVR
Sbjct: 20 LGAGQFGEVWMGYYNNSTK-------VAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVR 71
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L ++E ++ EFM +GSL + L + + + A+G+A++
Sbjct: 72 LYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE--RKN 129
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
I+RD + +N+L+ K++DFGLA++ + T R + + APE I+ G
Sbjct: 130 YIHRDLRAANVLVSESLMCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGC 186
Query: 277 LTTKSDVYSFGVVLLELLT 295
T KS+V+SFG++L E++T
Sbjct: 187 FTIKSNVWSFGILLYEIVT 205
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 133/308 (43%), Gaps = 44/308 (14%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH-REWLAEVIFLG 149
+N LGEG FG V K L+ VAVK+L R+ L+E L
Sbjct: 23 KNLVLGKTLGEGEFGKVVKA-TAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLK 81
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISV------------------ 191
Q+ HPH+++L G C +D LL+ E+ GSL L + V
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 192 ----SLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKM 247
+L G + A ++G+ +L AE +++RD NIL+ K+SDFGL++
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYL--AEMKLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 248 GPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPK 306
E + ++ + A E + TT+SDV+SFGV+L E++T G + P+
Sbjct: 200 VYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE 259
Query: 307 SEQNLVDWAKPYLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAV 366
NL L++ R+ + ++EM L LQC P RP A +
Sbjct: 260 RLFNL-------LKTGHRM----------ERPDNCSEEMYRLMLQCWKQEPDKRPVFADI 302
Query: 367 VATLESLL 374
LE ++
Sbjct: 303 SKDLEKMM 310
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 91/210 (43%), Gaps = 16/210 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LGEG FG V + L + K VAVK L +++ E L L+H H+VR
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDK-MLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKR-------------ISVSLPWGTRLKIAIGA 205
G C E L+V+E+M G L L L G L +A
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 206 AKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYG 265
A G+ +L G ++RD T N L+ K+ DFG+++ V R M
Sbjct: 168 AAGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 266 YAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ PE I TT+SDV+SFGVVL E+ T
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 135/288 (46%), Gaps = 32/288 (11%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEG-LQGHREWLAEVIFLGQLRHPHLV 157
LG+G FG V++G D ++ G VAVK ++ L+ E+L E + H+V
Sbjct: 25 LGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHL--FKRISVSLP------WGTRLKIAIGAAKGL 209
RL+G + + L+V E M G L+++L + + + P +++A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAP 269
A+L+ + ++RD N ++ DFT K+ DFG+ + E + + + + AP
Sbjct: 144 AYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAP 201
Query: 270 EYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPY--LRSSRRLRY 327
E + G TT SD++SFGVVL E+ + +EQ PY L + + L++
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQ-------PYQGLSNEQVLKF 244
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
++D Q + + L C NPK RP +V L+ L+
Sbjct: 245 VMDGGYLDQPD-NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH 291
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 135/283 (47%), Gaps = 32/283 (11%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGL-QGHREWLAEVIFLGQLRHPHL 156
++G G FG V G + G + VA+K L + R++L+E +GQ HP++
Sbjct: 21 VIGVGEFGEVCSGRLK---VPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 77
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFK---RISVSLPWGTRLKIAIGAAKGLAFLH 213
+ L G + + +++ E+M GSL+ L K R +V G + G G+ +L
Sbjct: 78 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVG----MLRGIGSGMKYL- 132
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGT-YGYAAPEYI 272
++ ++RD NIL++S+ K+SDFG++++ + TTR + APE I
Sbjct: 133 -SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 191
Query: 273 STGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDP 331
+ T+ SDV+S+G+V+ E+++ G R + S Q+++ + RL +D
Sbjct: 192 AYRKFTSASDVWSYGIVMWEVMSYGERPYWDM---SNQDVIK----AIEEGYRLPPPMDC 244
Query: 332 RLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL 374
+A + L L C DRPK +V L+ L+
Sbjct: 245 PIA----------LHQLMLDCWQKERSDRPKFGQIVNMLDKLI 277
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 135/283 (47%), Gaps = 32/283 (11%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGL-QGHREWLAEVIFLGQLRHPHL 156
++G G FG V G + G + VA+K L + R++L+E +GQ HP++
Sbjct: 15 VIGVGEFGEVCSGRLK---VPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 71
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFK---RISVSLPWGTRLKIAIGAAKGLAFLH 213
+ L G + + +++ E+M GSL+ L K R +V G + G G+ +L
Sbjct: 72 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVG----MLRGIGSGMKYL- 126
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGT-YGYAAPEYI 272
++ ++RD NIL++S+ K+SDFG++++ + TTR + APE I
Sbjct: 127 -SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 185
Query: 273 STGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDP 331
+ T+ SDV+S+G+V+ E+++ G R + S Q+++ + RL +D
Sbjct: 186 AYRKFTSASDVWSYGIVMWEVMSYGERPYWDM---SNQDVIK----AIEEGYRLPPPMDC 238
Query: 332 RLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL 374
+A + L L C DRPK +V L+ L+
Sbjct: 239 PIA----------LHQLMLDCWQKERSDRPKFGQIVNMLDKLI 271
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 134/288 (46%), Gaps = 32/288 (11%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEG-LQGHREWLAEVIFLGQLRHPHLV 157
LG+G FG V++G D ++ G VAVK ++ L+ E+L E + H+V
Sbjct: 24 LGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHL--FKRISVSLP------WGTRLKIAIGAAKGL 209
RL+G + + L+V E M G L+++L + + + P +++A A G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAP 269
A+L+ + ++RD N ++ DFT K+ DFG+ + E + + + AP
Sbjct: 143 AYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 270 EYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPY--LRSSRRLRY 327
E + G TT SD++SFGVVL E+ + +EQ PY L + + L++
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQ-------PYQGLSNEQVLKF 243
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
++D Q + + L C NPK RP +V L+ L+
Sbjct: 244 VMDGGYLDQPD-NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH 290
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 134/288 (46%), Gaps = 32/288 (11%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEG-LQGHREWLAEVIFLGQLRHPHLV 157
LG+G FG V++G D ++ G VAVK ++ L+ E+L E + H+V
Sbjct: 25 LGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHL--FKRISVSLP------WGTRLKIAIGAAKGL 209
RL+G + + L+V E M G L+++L + + + P +++A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAP 269
A+L+ + ++RD N ++ DFT K+ DFG+ + E + + + AP
Sbjct: 144 AYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 270 EYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPY--LRSSRRLRY 327
E + G TT SD++SFGVVL E+ + +EQ PY L + + L++
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQ-------PYQGLSNEQVLKF 244
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
++D Q + + L C NPK RP +V L+ L+
Sbjct: 245 VMDGGYLDQPD-NCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH 291
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 133/288 (46%), Gaps = 32/288 (11%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEG-LQGHREWLAEVIFLGQLRHPHLV 157
LG+G FG V++G D ++ G VAVK ++ L+ E+L E + H+V
Sbjct: 25 LGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHL--FKRISVSLP------WGTRLKIAIGAAKGL 209
RL+G + + L+V E M G L+++L + + + P +++A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAP 269
A+L+ + ++RD N ++ DFT K+ DFG+ + E + + + AP
Sbjct: 144 AYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 270 EYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPY--LRSSRRLRY 327
E + G TT SD++SFGVVL E+ + +EQ PY L + + L++
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQ-------PYQGLSNEQVLKF 244
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
++D Q + + L C NP RP +V L+ L+
Sbjct: 245 VMDGGYLDQPD-NCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLH 291
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 129/279 (46%), Gaps = 24/279 (8%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQLRHPHL 156
++G G FG V G + G + VA+K L + + R ++L E +GQ HP++
Sbjct: 29 VIGAGEFGEVCSGRLK---LPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNI 85
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
+ L G + + ++V E+M GSL+ L K+ + + G + G+ +L ++
Sbjct: 86 IHLEGVVTKSKPVMIVTEYMENGSLDTFL-KKNDGQFTVIQLVGMLRGISAGMKYL--SD 142
Query: 217 NPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGT-YGYAAPEYISTG 275
++RD NIL++S+ K+SDFGL+++ + TTR + APE I+
Sbjct: 143 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFR 202
Query: 276 HLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAG 335
T+ SDV+S+G+V+ E+++ RP E D K + RL +D A
Sbjct: 203 KFTSASDVWSYGIVMWEVVSYGE-----RPYWEMTNQDVIKA-VEEGYRLPSPMDCPAA- 255
Query: 336 QYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL 374
+ L L C RPK +V L+ L+
Sbjct: 256 ---------LYQLMLDCWQKERNSRPKFDEIVNMLDKLI 285
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 16/202 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG V + K VAVK + G +LAE + L+H LV+
Sbjct: 23 LGAGQFGEVWMATYN-------KHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVK 74
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L + E ++ EFM +GSL + L P + + A+G+AF+ +
Sbjct: 75 LHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE--QRN 131
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
I+RD + +NIL+ + K++DFGLA++ + T R + + APE I+ G
Sbjct: 132 YIHRDLRAANILVSASLVCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGS 188
Query: 277 LTTKSDVYSFGVVLLELLTGRR 298
T KSDV+SFG++L+E++T R
Sbjct: 189 FTIKSDVWSFGILLMEIVTYGR 210
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 98/200 (49%), Gaps = 22/200 (11%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG V + K VAVK + G +LAE + L+H LV+
Sbjct: 190 LGAGQFGEVWMATYN-------KHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVK 241
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L + E ++ EFM +GSL + L P + + A+G+AF+ +
Sbjct: 242 LHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE--QRN 298
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLT 278
I+RD + +NIL+ + K++DFGLA++G + + APE I+ G T
Sbjct: 299 YIHRDLRAANILVSASLVCKIADFGLARVGAKFP-----------IKWTAPEAINFGSFT 347
Query: 279 TKSDVYSFGVVLLELLTGRR 298
KSDV+SFG++L+E++T R
Sbjct: 348 IKSDVWSFGILLMEIVTYGR 367
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 16/202 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG V + K VAVK + G +LAE + L+H LV+
Sbjct: 196 LGAGQFGEVWMATYN-------KHTKVAVKTMK-PGSMSVEAFLAEANVMKTLQHDKLVK 247
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L + E ++ EFM +GSL + L P + + A+G+AF+ +
Sbjct: 248 LHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE--QRN 304
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
I+RD + +NIL+ + K++DFGLA++ + T R + + APE I+ G
Sbjct: 305 YIHRDLRAANILVSASLVCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGS 361
Query: 277 LTTKSDVYSFGVVLLELLTGRR 298
T KSDV+SFG++L+E++T R
Sbjct: 362 FTIKSDVWSFGILLMEIVTYGR 383
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 132/306 (43%), Gaps = 35/306 (11%)
Query: 82 QLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL--DIEGLQGHR 139
+L ++ Q F+ +LG+G FG+V + + + +K VAVK+L DI
Sbjct: 14 KLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVK---VAVKMLKADIIASSDIE 70
Query: 140 EWLAEVIFLGQLRHPHLVRLIGYCCEDEER------LLVYEFMPRGSLENHLF-KRIS-- 190
E+L E + + HPH+ +L+G + +++ FM G L L RI
Sbjct: 71 EFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGEN 130
Query: 191 -VSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGP 249
+LP T ++ + A G+ +L + I+RD N +L D T ++DFGL++
Sbjct: 131 PFNLPLQTLVRFMVDIACGMEYL--SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIY 188
Query: 250 EGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSE 308
G + A E ++ T SDV++FGV + E++T G+ +
Sbjct: 189 SGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI 248
Query: 309 QNLVDWAKPYLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVA 368
N YL RL+ + +E+ L QC S +PK RP +
Sbjct: 249 YN-------YLIGGNRLK----------QPPECMEEVYDLMYQCWSADPKQRPSFTCLRM 291
Query: 369 TLESLL 374
LE++L
Sbjct: 292 ELENIL 297
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 99/209 (47%), Gaps = 18/209 (8%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIE---GLQGHREWLAEVIF 147
Q+F LG G FG VH +R + A+K+L E L+ E +
Sbjct: 6 QDFQILRTLGTGSFGRVHL------IRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLM 59
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
L + HP ++R+ G + ++ ++ +++ G L + L R S P A
Sbjct: 60 LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL--RKSQRFPNPVAKFYAAEVCL 117
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L +LH + +IYRD K NILLD + K++DFG AK P+ VT + GT Y
Sbjct: 118 ALEYLHSKD--IIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLCGTPDYI 170
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
APE +ST D +SFG+++ E+L G
Sbjct: 171 APEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 127/288 (44%), Gaps = 36/288 (12%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLV 157
+LG+G FG K + + + +K L + R +L EV + L HP+++
Sbjct: 17 VLGKGCFGQAIK------VTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVL 70
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+ IG +D+ + E++ G+L + K + PW R+ A A G+A+LH
Sbjct: 71 KFIGVLYKDKRLNFITEYIKGGTLRG-IIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN- 128
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKM------GPEG------SNTHVTTRVMGTYG 265
+I+RD + N L+ + ++DFGLA++ PEG + V+G
Sbjct: 129 -IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPY 187
Query: 266 YAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRL 325
+ APE I+ K DV+SFG+VL E++ GR + D P +D+ L L
Sbjct: 188 WMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNAD---PDYLPRTMDFG---LNVRGFL 240
Query: 326 RYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESL 373
P + + ++C ++P+ RP + LE+L
Sbjct: 241 DRYCPPNCPPSF--------FPITVRCCDLDPEKRPSFVKLEHWLETL 280
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 10/199 (5%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FGTV KGY A + + L+ E LAE + QL +P++VR
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPYIVR 92
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
+IG CE E +LV E G L +L + V +++ + G+ +L E+
Sbjct: 93 MIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDK--NIIELVHQVSMGMKYLE--ESN 147
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
++RD N+LL + AK+SDFGL+K + + G + + APE I+
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYK 206
Query: 277 LTTKSDVYSFGVVLLELLT 295
++KSDV+SFGV++ E +
Sbjct: 207 FSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 10/199 (5%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FGTV KGY A + + L+ E LAE + QL +P++VR
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPYIVR 92
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
+IG CE E +LV E G L +L + V +++ + G+ +L E+
Sbjct: 93 MIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDK--NIIELVHQVSMGMKYLE--ESN 147
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
++RD N+LL + AK+SDFGL+K + + G + + APE I+
Sbjct: 148 FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYK 206
Query: 277 LTTKSDVYSFGVVLLELLT 295
++KSDV+SFGV++ E +
Sbjct: 207 FSSKSDVWSFGVLMWEAFS 225
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 97/198 (48%), Gaps = 8/198 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FGTV KGY A + + L+ E LAE + QL +P++VR
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPYIVR 76
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
+IG CE E +LV E G L +L + V +++ + G+ +L E+
Sbjct: 77 MIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDK--NIIELVHQVSMGMKYLE--ESN 131
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTH-VTTRVMGTYGYAAPEYISTGHL 277
++RD N+LL + AK+SDFGL+K N + T + APE I+
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKF 191
Query: 278 TTKSDVYSFGVVLLELLT 295
++KSDV+SFGV++ E +
Sbjct: 192 SSKSDVWSFGVLMWEAFS 209
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 10/199 (5%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FGTV KGY A + + L+ E LAE + QL +P++VR
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPYIVR 72
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
+IG CE E +LV E G L +L + V +++ + G+ +L E+
Sbjct: 73 MIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDK--NIIELVHQVSMGMKYLE--ESN 127
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
++RD N+LL + AK+SDFGL+K + + G + + APE I+
Sbjct: 128 FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYK 186
Query: 277 LTTKSDVYSFGVVLLELLT 295
++KSDV+SFGV++ E +
Sbjct: 187 FSSKSDVWSFGVLMWEAFS 205
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 10/199 (5%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FGTV KGY A + + L+ E LAE + QL +P++VR
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPYIVR 90
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
+IG CE E +LV E G L +L + V +++ + G+ +L E+
Sbjct: 91 MIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDK--NIIELVHQVSMGMKYLE--ESN 145
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
++RD N+LL + AK+SDFGL+K + + G + + APE I+
Sbjct: 146 FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYK 204
Query: 277 LTTKSDVYSFGVVLLELLT 295
++KSDV+SFGV++ E +
Sbjct: 205 FSSKSDVWSFGVLMWEAFS 223
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 10/199 (5%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FGTV KGY A + + L+ E LAE + QL +P++VR
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPYIVR 76
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
+IG CE E +LV E G L +L + V +++ + G+ +L E+
Sbjct: 77 MIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDK--NIIELVHQVSMGMKYLE--ESN 131
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
++RD N+LL + AK+SDFGL+K + + G + + APE I+
Sbjct: 132 FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYK 190
Query: 277 LTTKSDVYSFGVVLLELLT 295
++KSDV+SFGV++ E +
Sbjct: 191 FSSKSDVWSFGVLMWEAFS 209
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 10/199 (5%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FGTV KGY A + + L+ E LAE + QL +P++VR
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPYIVR 70
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
+IG CE E +LV E G L +L + V +++ + G+ +L E+
Sbjct: 71 MIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDK--NIIELVHQVSMGMKYLE--ESN 125
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
++RD N+LL + AK+SDFGL+K + + G + + APE I+
Sbjct: 126 FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYK 184
Query: 277 LTTKSDVYSFGVVLLELLT 295
++KSDV+SFGV++ E +
Sbjct: 185 FSSKSDVWSFGVLMWEAFS 203
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 10/199 (5%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FGTV KGY A + + L+ E LAE + QL +P++VR
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPYIVR 82
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
+IG CE E +LV E G L +L + V +++ + G+ +L E+
Sbjct: 83 MIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDK--NIIELVHQVSMGMKYLE--ESN 137
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
++RD N+LL + AK+SDFGL+K + + G + + APE I+
Sbjct: 138 FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYK 196
Query: 277 LTTKSDVYSFGVVLLELLT 295
++KSDV+SFGV++ E +
Sbjct: 197 FSSKSDVWSFGVLMWEAFS 215
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 97/198 (48%), Gaps = 8/198 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FGTV KGY A + + L+ E LAE + QL +P++VR
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPYIVR 435
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
+IG CE E +LV E G L +L + V +++ + G+ +L E+
Sbjct: 436 MIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDK--NIIELVHQVSMGMKYLE--ESN 490
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTH-VTTRVMGTYGYAAPEYISTGHL 277
++RD N+LL + AK+SDFGL+K N + T + APE I+
Sbjct: 491 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 550
Query: 278 TTKSDVYSFGVVLLELLT 295
++KSDV+SFGV++ E +
Sbjct: 551 SSKSDVWSFGVLMWEAFS 568
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 105/224 (46%), Gaps = 15/224 (6%)
Query: 75 GPDLYDFQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEG 134
G D F+ L+ + Q LG+G FG+V D Q + VAVK L
Sbjct: 1 GSDPTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHST 51
Query: 135 LQGHREWLAEVIFLGQLRHPHLVRLIGYCCEDEER--LLVYEFMPRGSLENHLFKRISVS 192
+ R++ E+ L L+H ++V+ G C R L+ E++P GSL ++L K
Sbjct: 52 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KER 110
Query: 193 LPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGS 252
+ L+ KG+ +L I+RD T NIL++++ K+ DFGL K+ P+
Sbjct: 111 IDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 168
Query: 253 N-THVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
V + APE ++ + SDV+SFGVVL EL T
Sbjct: 169 EXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 97/198 (48%), Gaps = 8/198 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FGTV KGY A + + L+ E LAE + QL +P++VR
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKD--ELLAEANVMQQLDNPYIVR 434
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
+IG CE E +LV E G L +L + V +++ + G+ +L E+
Sbjct: 435 MIG-ICEAESWMLVMEMAELGPLNKYLQQNRHVKDK--NIIELVHQVSMGMKYLE--ESN 489
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTH-VTTRVMGTYGYAAPEYISTGHL 277
++RD N+LL + AK+SDFGL+K N + T + APE I+
Sbjct: 490 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 549
Query: 278 TTKSDVYSFGVVLLELLT 295
++KSDV+SFGV++ E +
Sbjct: 550 SSKSDVWSFGVLMWEAFS 567
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L E E +V E+M +GSL + L + L + +A A G+A++
Sbjct: 78 LYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 134
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
++RD + +NIL+ + K++DFGLA++ + T R + + APE G
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLI---EDNEXTARQGAKFPIKWTAPEAALYGR 191
Query: 277 LTTKSDVYSFGVVLLELLTGRR 298
T KSDV+SFG++L EL T R
Sbjct: 192 FTIKSDVWSFGILLTELTTKGR 213
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 96/200 (48%), Gaps = 8/200 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG+V D Q + VAVK L + R++ E+ L L+H ++V+
Sbjct: 21 LGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 159 LIGYCCEDEER--LLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
G C R L+ EF+P GSL +L K + L+ KG+ +L
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKH-KERIDHIKLLQYTSQICKGMEYL--GT 135
Query: 217 NPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSN-THVTTRVMGTYGYAAPEYISTG 275
I+RD T NIL++++ K+ DFGL K+ P+ V + APE ++
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 276 HLTTKSDVYSFGVVLLELLT 295
+ SDV+SFGVVL EL T
Sbjct: 196 KFSVASDVWSFGVVLYELFT 215
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 17 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 68
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L E E +V E+M +GSL + L + L + +A A G+A++
Sbjct: 69 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 125
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
++RD + +NIL+ + K++DFGLA++ + T R + + APE G
Sbjct: 126 YVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGR 182
Query: 277 LTTKSDVYSFGVVLLELLTGRR 298
T KSDV+SFG++L EL T R
Sbjct: 183 FTIKSDVWSFGILLTELTTKGR 204
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 15 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 66
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L E E +V E+M +GSL + L + L + +A A G+A++
Sbjct: 67 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 123
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
++RD + +NIL+ + K++DFGLA++ + T R + + APE G
Sbjct: 124 YVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGR 180
Query: 277 LTTKSDVYSFGVVLLELLTGRR 298
T KSDV+SFG++L EL T R
Sbjct: 181 FTIKSDVWSFGILLTELTTKGR 202
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 128/287 (44%), Gaps = 32/287 (11%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+ + + LG G FG V++G + VAVK L + ++ E+L E + ++
Sbjct: 12 DITMKHKLGGGQFGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEI 64
Query: 152 RHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAF 211
+HP+LV+L+G C + ++ EFM G+L ++L + + L +A + + +
Sbjct: 65 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 124
Query: 212 LHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAAPE 270
L + I+RD N L+ + K++DFGL++ M + H + + APE
Sbjct: 125 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPE 180
Query: 271 YISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIV 329
++ + KSDV++FGV+L E+ T G + P L++ K Y R R
Sbjct: 181 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE--KDY-RMERP----- 232
Query: 330 DPRLAGQYSVKGAKEMAV-LALQCISVNPKDRPKMAAVVATLESLLN 375
+G E L C NP DRP A + E++
Sbjct: 233 ----------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 269
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 275 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 326
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L E E +V E+M +GSL + L L + +A A G+A++
Sbjct: 327 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-- 383
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
++RD + +NIL+ + K++DFGLA++ + T R + + APE G
Sbjct: 384 YVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGR 440
Query: 277 LTTKSDVYSFGVVLLELLTGRR 298
T KSDV+SFG++L EL T R
Sbjct: 441 FTIKSDVWSFGILLTELTTKGR 462
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L E E +V E+M +GSL + L + L + +A A G+A++
Sbjct: 78 LYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 134
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
++RD + +NIL+ + K++DFGLA++ + T R + + APE G
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 277 LTTKSDVYSFGVVLLELLTGRR 298
T KSDV+SFG++L EL T R
Sbjct: 192 FTIKSDVWSFGILLTELTTKGR 213
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 84 SELRAITQNFSSNYL-----LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH 138
SE R TQ F +L LG+G FG+V D Q + VAVK L +
Sbjct: 2 SEDRDPTQ-FEERHLKFLQQLGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHSTEEHL 58
Query: 139 REWLAEVIFLGQLRHPHLVRLIGYCCEDEER--LLVYEFMPRGSLENHLFKRISVSLPWG 196
R++ E+ L L+H ++V+ G C R L+ E++P GSL ++L K +
Sbjct: 59 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHI 117
Query: 197 TRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSN-TH 255
L+ KG+ +L I+RD T NIL++++ K+ DFGL K+ P+
Sbjct: 118 KLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 175
Query: 256 VTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
V + APE ++ + SDV+SFGVVL EL T
Sbjct: 176 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 97/200 (48%), Gaps = 8/200 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG+V D Q + VAVK L + R++ E+ L L+H ++V+
Sbjct: 17 LGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 159 LIGYCCEDEER--LLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
G C R L+ E++P GSL ++L K + L+ KG+ +L
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL--GT 131
Query: 217 NPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSN-THVTTRVMGTYGYAAPEYISTG 275
I+RD T NIL++++ K+ DFGL K+ P+ V + APE ++
Sbjct: 132 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 191
Query: 276 HLTTKSDVYSFGVVLLELLT 295
+ SDV+SFGVVL EL T
Sbjct: 192 KFSVASDVWSFGVVLYELFT 211
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 93/211 (44%), Gaps = 17/211 (8%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LGEG FG V + L VAVK L L +++ E L L+H H+V+
Sbjct: 23 LGEGAFGKVFLAECYN-LSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLF--------------KRISVSLPWGTRLKIAIG 204
G C + + ++V+E+M G L L ++ L L IA
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 141
Query: 205 AAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY 264
A G+ +L A ++RD T N L+ ++ K+ DFG+++ V M
Sbjct: 142 IASGMVYL--ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 265 GYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ PE I TT+SDV+SFGV+L E+ T
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L E E +V E+M +GSL + L + L + +A A G+A++
Sbjct: 78 LYAVVSE-EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 134
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
++RD + +NIL+ + K++DFGLA++ + T R + + APE G
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 277 LTTKSDVYSFGVVLLELLTGRR 298
T KSDV+SFG++L EL T R
Sbjct: 192 FTIKSDVWSFGILLTELTTKGR 213
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L E E +V E+M +GSL + L + L + +A A G+A++
Sbjct: 78 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 134
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
++RD + +NIL+ + K++DFGLA++ + T R + + APE G
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 277 LTTKSDVYSFGVVLLELLTGRR 298
T KSDV+SFG++L EL T R
Sbjct: 192 FTIKSDVWSFGILLTELTTKGR 213
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 133/288 (46%), Gaps = 32/288 (11%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEG-LQGHREWLAEVIFLGQLRHPHLV 157
LG+G FG V++G D ++ G VAVK ++ L+ E+L E + H+V
Sbjct: 25 LGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHL--FKRISVSLP------WGTRLKIAIGAAKGL 209
RL+G + + L+V E M G L+++L + + + P +++A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAP 269
A+L+ + ++R+ N ++ DFT K+ DFG+ + E + + + AP
Sbjct: 144 AYLNAKK--FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 270 EYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPY--LRSSRRLRY 327
E + G TT SD++SFGVVL E+ + +EQ PY L + + L++
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQ-------PYQGLSNEQVLKF 244
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
++D Q + + L C NP RP +V L+ L+
Sbjct: 245 VMDGGYLDQPD-NCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLH 291
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 105/224 (46%), Gaps = 15/224 (6%)
Query: 75 GPDLYDFQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEG 134
G D F+ L+ + Q LG+G FG+V D Q + VAVK L
Sbjct: 1 GSDPTQFEERHLKFLQQ-------LGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHST 51
Query: 135 LQGHREWLAEVIFLGQLRHPHLVRLIGYCCEDEER--LLVYEFMPRGSLENHLFKRISVS 192
+ R++ E+ L L+H ++V+ G C R L+ E++P GSL ++L K
Sbjct: 52 EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KER 110
Query: 193 LPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGS 252
+ L+ KG+ +L I+RD T NIL++++ K+ DFGL K+ P+
Sbjct: 111 IDHIKLLQYTSQICKGMEYL--GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 168
Query: 253 N-THVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
V + APE ++ + SDV+SFGVVL EL T
Sbjct: 169 EFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 133/288 (46%), Gaps = 32/288 (11%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEG-LQGHREWLAEVIFLGQLRHPHLV 157
LG+G FG V++G D ++ G VAVK ++ L+ E+L E + H+V
Sbjct: 26 LGQGSFGMVYEGNARDIIK-GEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHL--FKRISVSLP------WGTRLKIAIGAAKGL 209
RL+G + + L+V E M G L+++L + + + P +++A A G+
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAP 269
A+L+ + ++R+ N ++ DFT K+ DFG+ + E + + + AP
Sbjct: 145 AYLNAKK--FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 270 EYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPY--LRSSRRLRY 327
E + G TT SD++SFGVVL E+ + +EQ PY L + + L++
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWEITS----------LAEQ-------PYQGLSNEQVLKF 245
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
++D Q + + L C NP RP +V L+ L+
Sbjct: 246 VMDGGYLDQPD-NCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLH 292
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 97/200 (48%), Gaps = 8/200 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG+V D Q + VAVK L + R++ E+ L L+H ++V+
Sbjct: 23 LGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 159 LIGYCCEDEER--LLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
G C R L+ E++P GSL ++L K + L+ KG+ +L
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL--GT 137
Query: 217 NPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSN-THVTTRVMGTYGYAAPEYISTG 275
I+RD T NIL++++ K+ DFGL K+ P+ V + APE ++
Sbjct: 138 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 197
Query: 276 HLTTKSDVYSFGVVLLELLT 295
+ SDV+SFGVVL EL T
Sbjct: 198 KFSVASDVWSFGVVLYELFT 217
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 97/200 (48%), Gaps = 8/200 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG+V D Q + VAVK L + R++ E+ L L+H ++V+
Sbjct: 18 LGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 159 LIGYCCEDEER--LLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
G C R L+ E++P GSL ++L K + L+ KG+ +L
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL--GT 132
Query: 217 NPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSN-THVTTRVMGTYGYAAPEYISTG 275
I+RD T NIL++++ K+ DFGL K+ P+ V + APE ++
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 192
Query: 276 HLTTKSDVYSFGVVLLELLT 295
+ SDV+SFGVVL EL T
Sbjct: 193 KFSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 97/200 (48%), Gaps = 8/200 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG+V D Q + VAVK L + R++ E+ L L+H ++V+
Sbjct: 16 LGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 159 LIGYCCEDEER--LLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
G C R L+ E++P GSL ++L K + L+ KG+ +L
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL--GT 130
Query: 217 NPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSN-THVTTRVMGTYGYAAPEYISTG 275
I+RD T NIL++++ K+ DFGL K+ P+ V + APE ++
Sbjct: 131 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 190
Query: 276 HLTTKSDVYSFGVVLLELLT 295
+ SDV+SFGVVL EL T
Sbjct: 191 KFSVASDVWSFGVVLYELFT 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 97/200 (48%), Gaps = 8/200 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG+V D Q + VAVK L + R++ E+ L L+H ++V+
Sbjct: 22 LGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 159 LIGYCCEDEER--LLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
G C R L+ E++P GSL ++L K + L+ KG+ +L
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL--GT 136
Query: 217 NPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSN-THVTTRVMGTYGYAAPEYISTG 275
I+RD T NIL++++ K+ DFGL K+ P+ V + APE ++
Sbjct: 137 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 196
Query: 276 HLTTKSDVYSFGVVLLELLT 295
+ SDV+SFGVVL EL T
Sbjct: 197 KFSVASDVWSFGVVLYELFT 216
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 27/215 (12%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL-RHPHL 156
++GEG FG V K I D GL+ A ++ + HR++ E+ L +L HP++
Sbjct: 22 VIGEGNFGQVLKARIKKD---GLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKR--------------ISVSLPWGTRLKIA 202
+ L+G C L E+ P G+L + L K + +L L A
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
A+G+ +L ++ I+RD NIL+ ++ AK++DFGL++ G +V + MG
Sbjct: 139 ADVARGMDYL--SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYV-KKTMG 191
Query: 263 TYG--YAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ A E ++ TT SDV+S+GV+L E+++
Sbjct: 192 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 243
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L E E +V E+M +GSL + L L + +A A G+A++
Sbjct: 244 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-- 300
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
++RD + +NIL+ + K++DFGLA++ + T R + + APE G
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGR 357
Query: 277 LTTKSDVYSFGVVLLELLTGRR 298
T KSDV+SFG++L EL T R
Sbjct: 358 FTIKSDVWSFGILLTELTTKGR 379
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 97/200 (48%), Gaps = 8/200 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG+V D Q + VAVK L + R++ E+ L L+H ++V+
Sbjct: 25 LGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 159 LIGYCCEDEER--LLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
G C R L+ E++P GSL ++L K + L+ KG+ +L
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL--GT 139
Query: 217 NPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSN-THVTTRVMGTYGYAAPEYISTG 275
I+RD T NIL++++ K+ DFGL K+ P+ V + APE ++
Sbjct: 140 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 199
Query: 276 HLTTKSDVYSFGVVLLELLT 295
+ SDV+SFGVVL EL T
Sbjct: 200 KFSVASDVWSFGVVLYELFT 219
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 97/200 (48%), Gaps = 8/200 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG+V D Q + VAVK L + R++ E+ L L+H ++V+
Sbjct: 24 LGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 159 LIGYCCEDEER--LLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
G C R L+ E++P GSL ++L K + L+ KG+ +L
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL--GT 138
Query: 217 NPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSN-THVTTRVMGTYGYAAPEYISTG 275
I+RD T NIL++++ K+ DFGL K+ P+ V + APE ++
Sbjct: 139 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 198
Query: 276 HLTTKSDVYSFGVVLLELLT 295
+ SDV+SFGVVL EL T
Sbjct: 199 KFSVASDVWSFGVVLYELFT 218
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 27/215 (12%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL-RHPHL 156
++GEG FG V K I D GL+ A ++ + HR++ E+ L +L HP++
Sbjct: 32 VIGEGNFGQVLKARIKKD---GLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKR--------------ISVSLPWGTRLKIA 202
+ L+G C L E+ P G+L + L K + +L L A
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
A+G+ +L ++ I+RD NIL+ ++ AK++DFGL++ G +V + MG
Sbjct: 149 ADVARGMDYL--SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYV-KKTMG 201
Query: 263 TYG--YAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ A E ++ TT SDV+S+GV+L E+++
Sbjct: 202 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 243
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L E E +V E+M +GSL + L L + +A A G+A++
Sbjct: 244 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-- 300
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
++RD + +NIL+ + K++DFGLA++ + T R + + APE G
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGR 357
Query: 277 LTTKSDVYSFGVVLLELLTGRR 298
T KSDV+SFG++L EL T R
Sbjct: 358 FTIKSDVWSFGILLTELTTKGR 379
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 16 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 67
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L E E +V E+M +GSL + L L + +A A G+A++
Sbjct: 68 LYAVVSE-EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-- 124
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
++RD + +NIL+ + K++DFGLA++ + T R + + APE G
Sbjct: 125 YVHRDLRAANILVGENLVCKVADFGLARLI---EDNEXTARQGAKFPIKWTAPEAALYGR 181
Query: 277 LTTKSDVYSFGVVLLELLTGRR 298
T KSDV+SFG++L EL T R
Sbjct: 182 FTIKSDVWSFGILLTELTTKGR 203
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 97/200 (48%), Gaps = 8/200 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG+V D Q + VAVK L + R++ E+ L L+H ++V+
Sbjct: 49 LGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 159 LIGYCCEDEER--LLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
G C R L+ E++P GSL ++L K + L+ KG+ +L
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL--GT 163
Query: 217 NPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSN-THVTTRVMGTYGYAAPEYISTG 275
I+RD T NIL++++ K+ DFGL K+ P+ V + APE ++
Sbjct: 164 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 223
Query: 276 HLTTKSDVYSFGVVLLELLT 295
+ SDV+SFGVVL EL T
Sbjct: 224 KFSVASDVWSFGVVLYELFT 243
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 19 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 70
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L E E +V E+M +GSL + L L + +A A G+A++
Sbjct: 71 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-- 127
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
++RD + +NIL+ + K++DFGLA++ + T R + + APE G
Sbjct: 128 YVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGR 184
Query: 277 LTTKSDVYSFGVVLLELLTGRR 298
T KSDV+SFG++L EL T R
Sbjct: 185 FTIKSDVWSFGILLTELTTKGR 206
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 112/212 (52%), Gaps = 17/212 (8%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQ--GHREWLAEVIFLGQLRHPHL 156
LG G FG+V +G R K VA+K+L +G + E + E + QL +P++
Sbjct: 18 LGCGNFGSVRQGV----YRMRKKQIDVAIKVLK-QGTEKADTEEMMREAQIMHQLDNPYI 72
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
VRLIG C+ E +LV E G L L + +P ++ + G+ +L E
Sbjct: 73 VRLIG-VCQAEALMLVMEMAGGGPLHKFLVGKRE-EIPVSNVAELLHQVSMGMKYLE--E 128
Query: 217 NPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTY--GYAAPEYIS 273
++RD N+LL + AK+SDFGL+K +G + +++ T R G + + APE I+
Sbjct: 129 KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD--DSYYTARSAGKWPLKWYAPECIN 186
Query: 274 TGHLTTKSDVYSFGVVLLELLT-GRRSMDKLR 304
+++SDV+S+GV + E L+ G++ K++
Sbjct: 187 FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK 218
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 97/200 (48%), Gaps = 8/200 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG+V D Q + VAVK L + R++ E+ L L+H ++V+
Sbjct: 36 LGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 159 LIGYCCEDEER--LLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
G C R L+ E++P GSL ++L K + L+ KG+ +L
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL--GT 150
Query: 217 NPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSN-THVTTRVMGTYGYAAPEYISTG 275
I+RD T NIL++++ K+ DFGL K+ P+ V + APE ++
Sbjct: 151 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 210
Query: 276 HLTTKSDVYSFGVVLLELLT 295
+ SDV+SFGVVL EL T
Sbjct: 211 KFSVASDVWSFGVVLYELFT 230
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 16/202 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG V G + + + VA+K L G +L E + +L+H LV+
Sbjct: 17 LGNGQFGEVWMGTWNGNTK-------VAIKTLK-PGTMSPESFLEEAQIMKKLKHDKLVQ 68
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L E E +V E+M +GSL + L +L + +A A G+A++
Sbjct: 69 LYAVVSE-EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN-- 125
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
I+RD +++NIL+ + K++DFGLA++ + T R + + APE G
Sbjct: 126 YIHRDLRSANILVGNGLICKIADFGLARLI---EDNEXTARQGAKFPIKWTAPEAALYGR 182
Query: 277 LTTKSDVYSFGVVLLELLTGRR 298
T KSDV+SFG++L EL+T R
Sbjct: 183 FTIKSDVWSFGILLTELVTKGR 204
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 128/287 (44%), Gaps = 32/287 (11%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+ + + LG G +G V++G + VAVK L + ++ E+L E + ++
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEI 64
Query: 152 RHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAF 211
+HP+LV+L+G C + ++ EFM G+L ++L + + L +A + + +
Sbjct: 65 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 124
Query: 212 LHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAAPE 270
L + I+RD N L+ + K++DFGL++ M + H + + APE
Sbjct: 125 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPE 180
Query: 271 YISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIV 329
++ + KSDV++FGV+L E+ T G + P L++ K Y R R
Sbjct: 181 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE--KDY-RMERP----- 232
Query: 330 DPRLAGQYSVKGAKEMAV-LALQCISVNPKDRPKMAAVVATLESLLN 375
+G E L C NP DRP A + E++
Sbjct: 233 ----------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 269
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V G + R VA+K L G +L E + ++RH LV+
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKIRHEKLVQ 77
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L E E +V E+M +GSL + L + L + +A A G+A++
Sbjct: 78 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 134
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
++RD + +NIL+ + K++DFGLA++ + T R + + APE G
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 277 LTTKSDVYSFGVVLLELLTGRR 298
T KSDV+SFG++L EL T R
Sbjct: 192 FTIKSDVWSFGILLTELTTKGR 213
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 97/200 (48%), Gaps = 8/200 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG+V D Q + VAVK L + R++ E+ L L+H ++V+
Sbjct: 36 LGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 159 LIGYCCEDEER--LLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
G C R L+ E++P GSL ++L K + L+ KG+ +L
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL--GT 150
Query: 217 NPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSN-THVTTRVMGTYGYAAPEYISTG 275
I+RD T NIL++++ K+ DFGL K+ P+ V + APE ++
Sbjct: 151 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 210
Query: 276 HLTTKSDVYSFGVVLLELLT 295
+ SDV+SFGVVL EL T
Sbjct: 211 KFSVASDVWSFGVVLYELFT 230
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L E E +V E+M +GSL + L + L + +A A G+A++
Sbjct: 78 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 134
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
++RD +NIL+ + K++DFGLA++ + T R + + APE G
Sbjct: 135 YVHRDLAAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 277 LTTKSDVYSFGVVLLELLTGRR 298
T KSDV+SFG++L EL T R
Sbjct: 192 FTIKSDVWSFGILLTELTTKGR 213
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 192 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 243
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L E E +V E+M +GSL + L L + +A A G+A++
Sbjct: 244 LYAVVSE-EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN-- 300
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
++RD + +NIL+ + K++DFGLA++ + T R + + APE G
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGR 357
Query: 277 LTTKSDVYSFGVVLLELLTGRR 298
T KSDV+SFG++L EL T R
Sbjct: 358 FTIKSDVWSFGILLTELTTKGR 379
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L E E +V E+M +G L + L + L + +A A G+A++
Sbjct: 78 LYAVVSE-EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 134
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
++RD + +NIL+ + K++DFGLA++ + T R + + APE G
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 277 LTTKSDVYSFGVVLLELLTGRR 298
T KSDV+SFG++L EL T R
Sbjct: 192 FTIKSDVWSFGILLTELTTKGR 213
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE-WLAEVIFLGQLRHPHLV 157
+GEG FG VH+G + A AVA+K RE +L E + + Q HPH+V
Sbjct: 18 IGEGQFGDVHQGIY---MSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+LIG E+ ++ E G L + L R SL + + A + LA+L
Sbjct: 75 KLIGVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKR- 131
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
++RD N+L+ S+ KL DFGL++ E S + ++ + APE I+
Sbjct: 132 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 278 TTKSDVYSFGVVLLELL 294
T+ SDV+ FGV + E+L
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 101/208 (48%), Gaps = 19/208 (9%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD---IEGLQGHREWLAEVIFLGQLRHPH 155
LG G FG V G + L VAVK+L+ I L + E+ L RHPH
Sbjct: 24 LGVGTFGKVKVG------KHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPH 77
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
+++L + +V E++ G L +++ K + RL I + G+ + H
Sbjct: 78 IIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILS--GVDYCH-- 133
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTG 275
+ V++RD K N+LLD+ AK++DFGL+ M +G + G+ YAAPE IS G
Sbjct: 134 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAAPEVIS-G 189
Query: 276 HLTT--KSDVYSFGVVLLELLTGRRSMD 301
L + D++S GV+L LL G D
Sbjct: 190 RLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 98/200 (49%), Gaps = 8/200 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG+V D Q + VAVK L + R++ E+ L L+H ++V+
Sbjct: 19 LGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 159 LIGYCCEDEER--LLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
G C R L+ E++P GSL ++L K + L+ KG+ +L
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYL--GT 133
Query: 217 NPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTH-VTTRVMGTYGYAAPEYISTG 275
I+R+ T NIL++++ K+ DFGL K+ P+ + V + APE ++
Sbjct: 134 KRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTES 193
Query: 276 HLTTKSDVYSFGVVLLELLT 295
+ SDV+SFGVVL EL T
Sbjct: 194 KFSVASDVWSFGVVLYELFT 213
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 26 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L E E +V E+M +G L + L + L + +A A G+A++
Sbjct: 78 LYAVVSE-EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 134
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
++RD + +NIL+ + K++DFGLA++ + T R + + APE G
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 277 LTTKSDVYSFGVVLLELLTGRR 298
T KSDV+SFG++L EL T R
Sbjct: 192 FTIKSDVWSFGILLTELTTKGR 213
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 98/200 (49%), Gaps = 8/200 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG+V D Q + VAVK L + R++ E+ L L+H ++V+
Sbjct: 21 LGKGNFGSVEMCRYDP--LQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 159 LIGYCCEDEER--LLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
G C R L+ E++P GSL ++L + + + L+ KG+ +L
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QAHAERIDHIKLLQYTSQICKGMEYL--GT 135
Query: 217 NPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSN-THVTTRVMGTYGYAAPEYISTG 275
I+RD T NIL++++ K+ DFGL K+ P+ V + APE ++
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTES 195
Query: 276 HLTTKSDVYSFGVVLLELLT 295
+ SDV+SFGVVL EL T
Sbjct: 196 KFSVASDVWSFGVVLYELFT 215
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 128/287 (44%), Gaps = 32/287 (11%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+ + + LG G +G V++G + VAVK L + ++ E+L E + ++
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEI 64
Query: 152 RHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAF 211
+HP+LV+L+G C + ++ EFM G+L ++L + + L +A + + +
Sbjct: 65 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 124
Query: 212 LHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAAPE 270
L + I+RD N L+ + K++DFGL++ M + H + + APE
Sbjct: 125 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKF--PIKWTAPE 180
Query: 271 YISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIV 329
++ + KSDV++FGV+L E+ T G + P L++ K Y R R
Sbjct: 181 SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE--KDY-RMERP----- 232
Query: 330 DPRLAGQYSVKGAKEMAV-LALQCISVNPKDRPKMAAVVATLESLLN 375
+G E L C NP DRP A + E++
Sbjct: 233 ----------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 269
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE-WLAEVIFLGQLRHPHLV 157
+GEG FG VH+G + A AVA+K RE +L E + + Q HPH+V
Sbjct: 398 IGEGQFGDVHQGIY---MSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 454
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+LIG E+ ++ E G L + L R SL + + A + LA+L
Sbjct: 455 KLIGVITENP-VWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKR- 511
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
++RD N+L+ S+ KL DFGL++ E S + ++ + APE I+
Sbjct: 512 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRRF 569
Query: 278 TTKSDVYSFGVVLLELL 294
T+ SDV+ FGV + E+L
Sbjct: 570 TSASDVWMFGVCMWEIL 586
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 96/201 (47%), Gaps = 9/201 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLA-EVIFLGQLRHPHLV 157
LGEG FG V D + + VAVK L E H L E+ L L H ++V
Sbjct: 29 LGEGHFGKVELCRYDPEGDN--TGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86
Query: 158 RLIGYCCEDEER--LLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
+ G C ED L+ EF+P GSL+ +L K + + +LK A+ KG+ +L
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN-KINLKQQLKYAVQICKGMDYLGSR 145
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ ++RD N+L++S+ K+ DFGL K + + V + APE +
Sbjct: 146 Q--YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQ 203
Query: 275 GHLTTKSDVYSFGVVLLELLT 295
SDV+SFGV L ELLT
Sbjct: 204 SKFYIASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 96/201 (47%), Gaps = 9/201 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLA-EVIFLGQLRHPHLV 157
LGEG FG V D + + VAVK L E H L E+ L L H ++V
Sbjct: 17 LGEGHFGKVELCRYDPEGDN--TGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 74
Query: 158 RLIGYCCEDEER--LLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
+ G C ED L+ EF+P GSL+ +L K + + +LK A+ KG+ +L
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN-KINLKQQLKYAVQICKGMDYLGSR 133
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ ++RD N+L++S+ K+ DFGL K + + V + APE +
Sbjct: 134 Q--YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQ 191
Query: 275 GHLTTKSDVYSFGVVLLELLT 295
SDV+SFGV L ELLT
Sbjct: 192 SKFYIASDVWSFGVTLHELLT 212
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 95/197 (48%), Gaps = 9/197 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE-WLAEVIFLGQLRHPHLV 157
+GEG FG VH+G + A AVA+K RE +L E + + Q HPH+V
Sbjct: 18 IGEGQFGDVHQGIY---MSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+LIG E+ ++ E G L + L R SL + + A + LA+L
Sbjct: 75 KLIGVITENPV-WIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKR- 131
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
++RD N+L+ S+ KL DFGL++ E S ++ + APE I+
Sbjct: 132 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTXXKASKGKLPIKWMAPESINFRRF 189
Query: 278 TTKSDVYSFGVVLLELL 294
T+ SDV+ FGV + E+L
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 121/280 (43%), Gaps = 34/280 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 193 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGNMSPEAFLQEAQVMKKLRHEKLVQ 244
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L E E +V E+M +GSL + L + L + +A A G+A++
Sbjct: 245 LYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN-- 301
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
++RD + +NIL+ + K++DFGL ++ + T R + + APE G
Sbjct: 302 YVHRDLRAANILVGENLVCKVADFGLGRLI---EDNEYTARQGAKFPIKWTAPEAALYGR 358
Query: 277 LTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAG 335
T KSDV+SFG++L EL T GR + + + V+ R R P
Sbjct: 359 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE---------RGYRMPCPPEC-- 407
Query: 336 QYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
+ + L QC +P++RP + A LE
Sbjct: 408 ------PESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFT 441
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 136/318 (42%), Gaps = 43/318 (13%)
Query: 69 DLAHTFGPDLYDFQLSELRAITQNFSSNYLLGEGGFGTVHKG-YIDDDLRQGLKAQAVAV 127
DL ++ D + R +T S+ ++G+G FG V+ G YID Q A+
Sbjct: 2 DLDSALLAEVKDVLIPHERVVTH---SDRVIGKGHFGVVYHGEYID----QAQNRIQCAI 54
Query: 128 KLLD-IEGLQGHREWLAEVIFLGQLRHPHLVRLIGYCCEDE---ERLLVYEFMPRGSLEN 183
K L I +Q +L E + + L HP+++ LIG E LL Y M G L
Sbjct: 55 KSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPY--MCHGDLLQ 112
Query: 184 HLFKRISVSLPWGTRL-KIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDF 242
F R P L + A+G+ +L AE ++RD N +LD FT K++DF
Sbjct: 113 --FIRSPQRNPTVKDLISFGLQVARGMEYL--AEQKFVHRDLAARNCMLDESFTVKVADF 168
Query: 243 GLAK--MGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSM 300
GLA+ + E + + A E + T TTKSDV+SFGV+L ELLT R
Sbjct: 169 GLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT--RGA 226
Query: 301 DKLRPKSEQNLVDWAKPYLRSSRRL---RYIVDPRLAGQYSVKGAKEMAVLALQCISVNP 357
R +L +L RRL Y D Y V QC +P
Sbjct: 227 PPYRHIDPFDLTH----FLAQGRRLPQPEYCPD----SLYQVMQ---------QCWEADP 269
Query: 358 KDRPKMAAVVATLESLLN 375
RP +V +E +++
Sbjct: 270 AVRPTFRVLVGEVEQIVS 287
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 27/215 (12%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL-RHPHL 156
++GEG FG V K I D GL+ A ++ + HR++ E+ L +L HP++
Sbjct: 29 VIGEGNFGQVLKARIKKD---GLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 85
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKR--------------ISVSLPWGTRLKIA 202
+ L+G C L E+ P G+L + L K + +L L A
Sbjct: 86 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 145
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
A+G+ +L ++ I+R+ NIL+ ++ AK++DFGL++ G +V + MG
Sbjct: 146 ADVARGMDYL--SQKQFIHRNLAARNILVGENYVAKIADFGLSR----GQEVYV-KKTMG 198
Query: 263 T--YGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ A E ++ TT SDV+S+GV+L E+++
Sbjct: 199 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 23 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 74
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L E E +V E+M +GSL + L L + ++ A G+A++
Sbjct: 75 LYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN-- 131
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
++RD + +NIL+ + K++DFGLA++ + T R + + APE G
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGR 188
Query: 277 LTTKSDVYSFGVVLLELLTGRR 298
T KSDV+SFG++L EL T R
Sbjct: 189 FTIKSDVWSFGILLTELTTKGR 210
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE-WLAEVIFLGQLRHPHLV 157
+GEG FG VH+G + A AVA+K RE +L E + + Q HPH+V
Sbjct: 18 IGEGQFGDVHQGIY---MSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+LIG E+ ++ E G L + L R SL + + A + LA+L
Sbjct: 75 KLIGVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKR- 131
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
++RD N+L+ S+ KL DFGL++ E S + ++ + APE I+
Sbjct: 132 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 278 TTKSDVYSFGVVLLELL 294
T+ SDV+ FGV + E+L
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE-WLAEVIFLGQLRHPHLV 157
+GEG FG VH+G + A AVA+K RE +L E + + Q HPH+V
Sbjct: 15 IGEGQFGDVHQGIY---MSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 71
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+LIG E+ ++ E G L + L R SL + + A + LA+L
Sbjct: 72 KLIGVITENP-VWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKR- 128
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
++RD N+L+ S+ KL DFGL++ E S + ++ + APE I+
Sbjct: 129 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRRF 186
Query: 278 TTKSDVYSFGVVLLELL 294
T+ SDV+ FGV + E+L
Sbjct: 187 TSASDVWMFGVCMWEIL 203
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 96/197 (48%), Gaps = 9/197 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE-WLAEVIFLGQLRHPHLV 157
+GEG FG VH+G + A AVA+K RE +L E + + Q HPH+V
Sbjct: 20 IGEGQFGDVHQGIY---MSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 76
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+LIG E+ ++ E G L + L R SL + + A + LA+L
Sbjct: 77 KLIGVITENP-VWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKR- 133
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
++RD N+L+ S+ KL DFGL++ E S + ++ + APE I+
Sbjct: 134 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRRF 191
Query: 278 TTKSDVYSFGVVLLELL 294
T+ SDV+ FGV + E+L
Sbjct: 192 TSASDVWMFGVCMWEIL 208
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V G + R VA+K L G +L E + +LRH LV+
Sbjct: 23 LGQGCFGEVWMGTWNGTTR-------VAIKTLK-PGTMSPEAFLQEAQVMKKLRHEKLVQ 74
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L E E +V E+M +GSL + L L + ++ A G+A++
Sbjct: 75 LYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN-- 131
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY--GYAAPEYISTGH 276
++RD + +NIL+ + K++DFGLA++ + T R + + APE G
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARLI---EDNEWTARQGAKFPIKWTAPEAALYGR 188
Query: 277 LTTKSDVYSFGVVLLELLTGRR 298
T KSDV+SFG++L EL T R
Sbjct: 189 FTIKSDVWSFGILLTELTTKGR 210
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 99 LGEGGFGTVHKG-YIDDDLRQGLKAQAVAVKLLDIEGLQGHRE-WLAEVIFLGQLRHPHL 156
+GEG FG VH+G Y+ + A AVA+K RE +L E + + Q HPH+
Sbjct: 46 IGEGQFGDVHQGIYMSPEN----PALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 101
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
V+LIG E+ ++ E G L + L R SL + + A + LA+L
Sbjct: 102 VKLIGVITENP-VWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKR 159
Query: 217 NPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGH 276
++RD N+L+ S+ KL DFGL++ E S + ++ + APE I+
Sbjct: 160 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRR 216
Query: 277 LTTKSDVYSFGVVLLELL 294
T+ SDV+ FGV + E+L
Sbjct: 217 FTSASDVWMFGVCMWEIL 234
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 99 LGEGGFGTVHKG-YIDDDLRQGLKAQAVAVKLLDIEGLQGHRE-WLAEVIFLGQLRHPHL 156
+GEG FG VH+G Y+ + A AVA+K RE +L E + + Q HPH+
Sbjct: 21 IGEGQFGDVHQGIYMSPEN----PALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 76
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
V+LIG E+ ++ E G L + L R SL + + A + LA+L
Sbjct: 77 VKLIGVITENP-VWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKR 134
Query: 217 NPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGH 276
++RD N+L+ S+ KL DFGL++ E S + ++ + APE I+
Sbjct: 135 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRR 191
Query: 277 LTTKSDVYSFGVVLLELL 294
T+ SDV+ FGV + E+L
Sbjct: 192 FTSASDVWMFGVCMWEIL 209
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 116/279 (41%), Gaps = 27/279 (9%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
NF +G G F V++ L G+ V++ D+ + + + E+ L QL
Sbjct: 33 NFRIEKKIGRGQFSEVYRAAC---LLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL 89
Query: 152 RHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHL--FKRISVSLPWGTRLKIAIGAAKGL 209
HP++++ ED E +V E G L + FK+ +P T K + L
Sbjct: 90 NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSAL 149
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAP 269
+H V++RD K +N+ + + KL D GL + S T ++GT Y +P
Sbjct: 150 EHMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGRFF--SSKTTAAHSLVGTPYYMSP 205
Query: 270 EYISTGHLTTKSDVYSFGVVLLELLTGRRSM--DKLRPKSEQNLVDWAKPYLRSSRRLRY 327
E I KSD++S G +L E+ + DK+ NL K +
Sbjct: 206 ERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM------NLYSLCKKIEQCD----- 254
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAV 366
P + YS +E+ L CI+ +P+ RP + V
Sbjct: 255 -YPPLPSDHYS----EELRQLVNMCINPDPEKRPDVTYV 288
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 99 LGEGGFGTVHKG-YIDDDLRQGLKAQAVAVKLLDIEGLQGHRE-WLAEVIFLGQLRHPHL 156
+GEG FG VH+G Y+ + A AVA+K RE +L E + + Q HPH+
Sbjct: 23 IGEGQFGDVHQGIYMSPEN----PALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 78
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
V+LIG E+ ++ E G L + L R SL + + A + LA+L
Sbjct: 79 VKLIGVITENPV-WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKR 136
Query: 217 NPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGH 276
++RD N+L+ S+ KL DFGL++ E S + ++ + APE I+
Sbjct: 137 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRR 193
Query: 277 LTTKSDVYSFGVVLLELL 294
T+ SDV+ FGV + E+L
Sbjct: 194 FTSASDVWMFGVCMWEIL 211
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 7 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 60
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L+ + +P +G
Sbjct: 61 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 119
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G T + T Y A
Sbjct: 120 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRA 175
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 129/279 (46%), Gaps = 36/279 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQA-VAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLV 157
LG G FG V G K Q VAVK++ EG E+ E + +L HP LV
Sbjct: 16 LGSGQFGVVKLG--------KWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLV 66
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+ G C ++ +V E++ G L N+L + L L++ +G+AFL +
Sbjct: 67 KFYGVCSKEYPIYIVTEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCEGMAFLESHQ- 124
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGT---YGYAAPEYIST 274
I+RD N L+D D K+SDFG+ + + + +V++ +GT ++APE
Sbjct: 125 -FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLD--DQYVSS--VGTKFPVKWSAPEVFHY 179
Query: 275 GHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLA 334
++KSDV++FG+++ E+ + + L SE L+ S+ R + P LA
Sbjct: 180 FKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE--------VVLKVSQGHR-LYRPHLA 230
Query: 335 GQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESL 373
+ + + C P+ RP +++++E L
Sbjct: 231 -------SDTIYQIMYSCWHELPEKRPTFQQLLSSIEPL 262
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 15/231 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQ-LRHPHLV 157
LGEG +G V + +AVAVK++D++ E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+ G+ E + L E+ G L + + I + P R + A G+ +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
+ +RD K N+LLD K+SDFGLA + + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 278 TTKS-DVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDW--AKPYLRSSRRL 325
+ DV+S G+VL +L G D+ S Q DW K YL +++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ-PSDSXQEYSDWKEKKTYLNPWKKI 233
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 14/208 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LGEG FG V + + K VAVK L +++ E L L+H H+V+
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKI-LVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK 79
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKR-----------ISVSLPWGTRLKIAIGAAK 207
G C E + ++V+E+M G L L L L IA A
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAA 139
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
G+ +L A ++RD T N L+ + K+ DFG+++ V M +
Sbjct: 140 GMVYL--ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLT 295
PE I TT+SDV+S GVVL E+ T
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 55
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L+ + +P +G
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G T + T Y A
Sbjct: 115 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRA 170
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 56
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L+ + +P +G
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G T + T Y A
Sbjct: 116 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRA 171
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 55
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L+ + +P +G
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G T + T Y A
Sbjct: 115 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRA 170
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 56
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L+ + +P +G
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G T + T Y A
Sbjct: 116 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRA 171
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 172 PEILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 10 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 63
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L+ + +P +G
Sbjct: 64 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 122
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G T + T Y A
Sbjct: 123 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRA 178
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 179 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LGEG +G+V+K + Q VA+K + +E +E + E+ + Q PH+V+
Sbjct: 37 LGEGSYGSVYKAIHKE------TGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVK 88
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
G ++ + +V E+ GS+ + + R + +L I KGL +LH
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHFMRK- 146
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLT 278
I+RD K NILL+++ AKL+DFG+A G V+GT + APE I
Sbjct: 147 -IHRDIKAGNILLNTEGHAKLADFGVA--GQLTDXMAKRNXVIGTPFWMAPEVIQEIGYN 203
Query: 279 TKSDVYSFGVVLLELLTGRRSMDKLRP 305
+D++S G+ +E+ G+ + P
Sbjct: 204 CVADIWSLGITAIEMAEGKPPYADIHP 230
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 111/212 (52%), Gaps = 17/212 (8%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQ--GHREWLAEVIFLGQLRHPHL 156
LG G FG+V +G R K VA+K+L +G + E + E + QL +P++
Sbjct: 344 LGCGNFGSVRQGVY----RMRKKQIDVAIKVLK-QGTEKADTEEMMREAQIMHQLDNPYI 398
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
VRLIG C+ E +LV E G L L + +P ++ + G+ +L E
Sbjct: 399 VRLIG-VCQAEALMLVMEMAGGGPLHKFLVGKRE-EIPVSNVAELLHQVSMGMKYLE--E 454
Query: 217 NPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTY--GYAAPEYIS 273
++R+ N+LL + AK+SDFGL+K +G +++ T R G + + APE I+
Sbjct: 455 KNFVHRNLAARNVLLVNRHYAKISDFGLSKALG--ADDSYYTARSAGKWPLKWYAPECIN 512
Query: 274 TGHLTTKSDVYSFGVVLLELLT-GRRSMDKLR 304
+++SDV+S+GV + E L+ G++ K++
Sbjct: 513 FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK 544
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 56
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L+ + +P +G
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G T + T Y A
Sbjct: 116 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRA 171
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 10 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 63
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L+ + +P +G
Sbjct: 64 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 122
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G T + T Y A
Sbjct: 123 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRA 178
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 179 PEILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 4 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 57
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L+ + +P +G
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G T + T Y A
Sbjct: 117 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRA 172
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 15/231 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQ-LRHPHLV 157
LGEG +G V + +AVAVK++D++ E + + I + + L H ++V
Sbjct: 15 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+ G+ E + L E+ G L + + I + P R + A G+ +LHG
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
+ +RD K N+LLD K+SDFGLA + + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 278 TTKS-DVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDW--AKPYLRSSRRL 325
+ DV+S G+VL +L G D+ S Q DW K YL +++
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPS-DSCQEYSDWKEKKTYLNPWKKI 234
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 15/231 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQ-LRHPHLV 157
LGEG +G V + +AVAVK++D++ E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+ G+ E + L E+ G L + + I + P R + A G+ +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
+ +RD K N+LLD K+SDFGLA + + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 278 TTKS-DVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDW--AKPYLRSSRRL 325
+ DV+S G+VL +L G D+ S Q DW K YL +++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPS-DSCQEYSDWKEKKTYLNPWKKI 233
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 101/200 (50%), Gaps = 10/200 (5%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG GG TV Y+ +D +K A+ + E + + + EV QL H ++V
Sbjct: 19 LGGGGMSTV---YLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVS 75
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
+I ED+ LV E++ +L ++ +S+ T + G+ H +
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSV--DTAINFTNQILDGIK--HAHDMR 131
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLT 278
+++RD K NIL+DS+ T K+ DFG+AK E S T T V+GT Y +PE + G T
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGTVQYFSPEQ-AKGEAT 189
Query: 279 TK-SDVYSFGVVLLELLTGR 297
+ +D+YS G+VL E+L G
Sbjct: 190 DECTDIYSIGIVLYEMLVGE 209
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 104/200 (52%), Gaps = 15/200 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+G+G GTV+ D+ G Q VA++ ++++ + E++ + + ++P++V
Sbjct: 28 IGQGASGTVYTAM---DVATG---QEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
+ +E +V E++ GSL + + + + G + + L FLH N
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHS--NQ 136
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGL-AKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
VI+RD K+ NILL D + KL+DFG A++ PE S + ++GT + APE ++
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSEMVGTPYWMAPEVVTRKAY 193
Query: 278 TTKSDVYSFGVVLLELLTGR 297
K D++S G++ +E++ G
Sbjct: 194 GPKVDIWSLGIMAIEMIEGE 213
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 15/231 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQ-LRHPHLV 157
LGEG +G V + +AVAVK++D++ E + + I + + L H ++V
Sbjct: 13 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 66
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+ G+ E + L E+ G L + + I + P R + A G+ +LHG
Sbjct: 67 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 123
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
+ +RD K N+LLD K+SDFGLA + + + ++ GT Y APE +
Sbjct: 124 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 182
Query: 278 TTKS-DVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDW--AKPYLRSSRRL 325
+ DV+S G+VL +L G D+ S Q DW K YL +++
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKEKKTYLNPWKKI 232
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 15/231 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQ-LRHPHLV 157
LGEG +G V + +AVAVK++D++ E + + I + + L H ++V
Sbjct: 15 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+ G+ E + L E+ G L + + I + P R + A G+ +LHG
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
+ +RD K N+LLD K+SDFGLA + + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 278 TTKS-DVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDW--AKPYLRSSRRL 325
+ DV+S G+VL +L G D+ S Q DW K YL +++
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKEKKTYLNPWKKI 234
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 95/197 (48%), Gaps = 9/197 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE-WLAEVIFLGQLRHPHLV 157
+GEG FG VH+G + A AVA+K RE +L E + + Q HPH+V
Sbjct: 18 IGEGQFGDVHQGIY---MSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 74
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+LIG E+ ++ E G L + L R SL + + A + LA+L
Sbjct: 75 KLIGVITENPV-WIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKR- 131
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
++RD N+L+ + KL DFGL++ E S + ++ + APE I+
Sbjct: 132 -FVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 278 TTKSDVYSFGVVLLELL 294
T+ SDV+ FGV + E+L
Sbjct: 190 TSASDVWMFGVCMWEIL 206
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 15/231 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQ-LRHPHLV 157
LGEG +G V + +AVAVK++D++ E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+ G+ E + L E+ G L + + I + P R + A G+ +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
+ +RD K N+LLD K+SDFGLA + + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 278 TTKS-DVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDW--AKPYLRSSRRL 325
+ DV+S G+VL +L G D+ S Q DW K YL +++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 15/231 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQ-LRHPHLV 157
LGEG +G V + +AVAVK++D++ E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVV 67
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+ G+ E + L E+ G L + + I + P R + A G+ +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
+ +RD K N+LLD K+SDFGLA + + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 278 TTKS-DVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDW--AKPYLRSSRRL 325
+ DV+S G+VL +L G D+ S Q DW K YL +++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 15/231 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQ-LRHPHLV 157
LGEG +G V + +AVAVK++D++ E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVV 67
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+ G+ E + L E+ G L + + I + P R + A G+ +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
+ +RD K N+LLD K+SDFGLA + + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 278 TTKS-DVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDW--AKPYLRSSRRL 325
+ DV+S G+VL +L G D+ S Q DW K YL +++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 106/237 (44%), Gaps = 40/237 (16%)
Query: 67 NEDLAHTFGPDLYDFQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVA 126
+ D+A F D + S+LR I G G FG V Y D+R ++ VA
Sbjct: 40 DPDVAELFFKDDPEKLFSDLREI----------GHGSFGAV---YFARDVRN---SEVVA 83
Query: 127 VKLLDIEGLQGHREW---LAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGS--- 180
+K + G Q + +W + EV FL +LRHP+ ++ G + LV E+ +
Sbjct: 84 IKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDL 143
Query: 181 LENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLS 240
LE H V + T GA +GLA+LH + +I+RD K NILL KL
Sbjct: 144 LEVHKKPLQEVEIAAVTH-----GALQGLAYLHS--HNMIHRDVKAGNILLSEPGLVKLG 196
Query: 241 DFGLAK-MGPEGSNTHVTTRVMGTYGYAAPEYI---STGHLTTKSDVYSFGVVLLEL 293
DFG A M P +GT + APE I G K DV+S G+ +EL
Sbjct: 197 DFGSASIMAP-------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 15/231 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQ-LRHPHLV 157
LGEG +G V + +AVAVK++D++ E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+ G+ E + L E+ G L + + I + P R + A G+ +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
+ +RD K N+LLD K+SDFGLA + + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 278 TTKS-DVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDW--AKPYLRSSRRL 325
+ DV+S G+VL +L G D+ S Q DW K YL +++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 122/273 (44%), Gaps = 28/273 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGL---QGHREWLAEVIFLGQLRHPH 155
LG+G FG V +G D K +VAVK L + L + +++ EV + L H +
Sbjct: 20 LGDGSFGVVRRGEWD---APSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
L+RL G ++ V E P GSL + L K L GT + A+ A+G+ +L
Sbjct: 77 LIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESK 134
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGT-YGYAAPEYIST 274
I+RD N+LL + K+ DFGL + P+ + +V + + APE + T
Sbjct: 135 R--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 275 GHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRL 333
+ SD + FGV L E+ T G+ L + +D + RL PR
Sbjct: 193 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKID------KEGERL-----PR- 240
Query: 334 AGQYSVKGAKEMAVLALQCISVNPKDRPKMAAV 366
+++ + +QC + P+DRP A+
Sbjct: 241 ----PEDCPQDIYNVMVQCWAHKPEDRPTFVAL 269
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 15/231 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQ-LRHPHLV 157
LGEG +G V + +AVAVK++D++ E + + I + + L H ++V
Sbjct: 15 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+ G+ E + L E+ G L + + I + P R + A G+ +LHG
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
+ +RD K N+LLD K+SDFGLA + + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 278 TTKS-DVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDW--AKPYLRSSRRL 325
+ DV+S G+VL +L G D+ S Q DW K YL +++
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKEKKTYLNPWKKI 234
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 15/231 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQ-LRHPHLV 157
LGEG +G V + +AVAVK++D++ E + + I + + L H ++V
Sbjct: 15 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+ G+ E + L E+ G L + + I + P R + A G+ +LHG
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
+ +RD K N+LLD K+SDFGLA + + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 278 TTKS-DVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDW--AKPYLRSSRRL 325
+ DV+S G+VL +L G D+ S Q DW K YL +++
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKEKKTYLNPWKKI 234
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 15/231 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQ-LRHPHLV 157
LGEG +G V + +AVAVK++D++ E + + I + + L H ++V
Sbjct: 15 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+ G+ E + L E+ G L + + I + P R + A G+ +LHG
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
+ +RD K N+LLD K+SDFGLA + + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 278 TTKS-DVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDW--AKPYLRSSRRL 325
+ DV+S G+VL +L G D+ S Q DW K YL +++
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKEKKTYLNPWKKI 234
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 15/231 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQ-LRHPHLV 157
LGEG +G V + +AVAVK++D++ E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+ G+ E + L E+ G L + + I + P R + A G+ +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
+ +RD K N+LLD K+SDFGLA + + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 278 TTKS-DVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDW--AKPYLRSSRRL 325
+ DV+S G+VL +L G D+ S Q DW K YL +++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 105/231 (45%), Gaps = 15/231 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIE-GLQGHREWLAEVIFLGQLRHPHLV 157
LGEG +G V + +AVAVK++D++ + E+ L H ++V
Sbjct: 15 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVV 68
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+ G+ E + L E+ G L + + I + P R + A G+ +LHG
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
+ +RD K N+LLD K+SDFGLA + + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 278 TTKS-DVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDW--AKPYLRSSRRL 325
+ DV+S G+VL +L G D+ S Q DW K YL +++
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKEKKTYLNPWKKI 234
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 15/231 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQ-LRHPHLV 157
LGEG +G V + +AVAVK++D++ E + + I + + L H ++V
Sbjct: 15 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVV 68
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+ G+ E + L E+ G L + + I + P R + A G+ +LHG
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
+ +RD K N+LLD K+SDFGLA + + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 184
Query: 278 TTKS-DVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDW--AKPYLRSSRRL 325
+ DV+S G+VL +L G D+ S Q DW K YL +++
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKEKKTYLNPWKKI 234
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 104/200 (52%), Gaps = 15/200 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+G+G GTV+ D+ G Q VA++ ++++ + E++ + + ++P++V
Sbjct: 28 IGQGASGTVYTAM---DVATG---QEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
+ +E +V E++ GSL + + + + G + + L FLH N
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHS--NQ 136
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGL-AKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
VI+RD K+ NILL D + KL+DFG A++ PE S + ++GT + APE ++
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVVTRKAY 193
Query: 278 TTKSDVYSFGVVLLELLTGR 297
K D++S G++ +E++ G
Sbjct: 194 GPKVDIWSLGIMAIEMIEGE 213
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 105/212 (49%), Gaps = 14/212 (6%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
N+ LGEG FG V Y Q + + + K+L +QG E E+ +L L
Sbjct: 5 NYQIVKTLGEGSFGKVKLAY-HTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLL 61
Query: 152 RHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAF 211
RHPH+++L +E ++V E+ L +++ +R +S R I +A + +
Sbjct: 62 RHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISA--VEY 118
Query: 212 LHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEY 271
H + +++RD K N+LLD K++DFGL+ + +G+ + G+ YAAPE
Sbjct: 119 CH--RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEV 173
Query: 272 ISTGHLTT--KSDVYSFGVVLLELLTGRRSMD 301
IS G L + DV+S GV+L +L R D
Sbjct: 174 IS-GKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 15/231 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQ-LRHPHLV 157
LGEG +G V + +AVAVK++D++ E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+ G+ E + L E+ G L + + I + P R + A G+ +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
+ +RD K N+LLD K+SDFGLA + + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 278 TTKS-DVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDW--AKPYLRSSRRL 325
+ DV+S G+VL +L G D+ S Q DW K YL +++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 105/212 (49%), Gaps = 14/212 (6%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
N+ LGEG FG V Y Q + + + K+L +QG E E+ +L L
Sbjct: 15 NYQIVKTLGEGSFGKVKLAY-HTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLL 71
Query: 152 RHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAF 211
RHPH+++L +E ++V E+ L +++ +R +S R I +A + +
Sbjct: 72 RHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISA--VEY 128
Query: 212 LHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEY 271
H + +++RD K N+LLD K++DFGL+ + +G+ + G+ YAAPE
Sbjct: 129 CH--RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEV 183
Query: 272 ISTGHLTT--KSDVYSFGVVLLELLTGRRSMD 301
IS G L + DV+S GV+L +L R D
Sbjct: 184 IS-GKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 104/200 (52%), Gaps = 15/200 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+G+G GTV+ D+ G Q VA++ ++++ + E++ + + ++P++V
Sbjct: 28 IGQGASGTVYTAM---DVATG---QEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
+ +E +V E++ GSL + + + + G + + L FLH N
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHS--NQ 136
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGL-AKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
VI+RD K+ NILL D + KL+DFG A++ PE S + ++GT + APE ++
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEVVTRKAY 193
Query: 278 TTKSDVYSFGVVLLELLTGR 297
K D++S G++ +E++ G
Sbjct: 194 GPKVDIWSLGIMAIEMIEGE 213
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 105/212 (49%), Gaps = 14/212 (6%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
N+ LGEG FG V Y Q + + + K+L +QG E E+ +L L
Sbjct: 14 NYQIVKTLGEGSFGKVKLAY-HTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLL 70
Query: 152 RHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAF 211
RHPH+++L +E ++V E+ L +++ +R +S R I +A + +
Sbjct: 71 RHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISA--VEY 127
Query: 212 LHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEY 271
H + +++RD K N+LLD K++DFGL+ + +G+ + G+ YAAPE
Sbjct: 128 CH--RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEV 182
Query: 272 ISTGHLTT--KSDVYSFGVVLLELLTGRRSMD 301
IS G L + DV+S GV+L +L R D
Sbjct: 183 IS-GKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 104/200 (52%), Gaps = 15/200 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+G+G GTV+ D+ G Q VA++ ++++ + E++ + + ++P++V
Sbjct: 29 IGQGASGTVYTAM---DVATG---QEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
+ +E +V E++ GSL + + + + G + + L FLH N
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHS--NQ 137
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGL-AKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
VI+RD K+ NILL D + KL+DFG A++ PE S + ++GT + APE ++
Sbjct: 138 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEVVTRKAY 194
Query: 278 TTKSDVYSFGVVLLELLTGR 297
K D++S G++ +E++ G
Sbjct: 195 GPKVDIWSLGIMAIEMIEGE 214
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 15/231 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQ-LRHPHLV 157
LGEG +G V + +AVAVK++D++ E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+ G+ E + L E+ G L + + I + P R + A G+ +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
+ +RD K N+LLD K+SDFGLA + + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 278 TTKS-DVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDW--AKPYLRSSRRL 325
+ DV+S G+VL +L G D+ S Q DW K YL +++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 15/231 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQ-LRHPHLV 157
LGEG +G V + +AVAVK++D++ E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+ G+ E + L E+ G L + + I + P R + A G+ +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
+ +RD K N+LLD K+SDFGLA + + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 278 TTKS-DVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDW--AKPYLRSSRRL 325
+ DV+S G+VL +L G D+ S Q DW K YL +++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 124/286 (43%), Gaps = 30/286 (10%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+ + + LG G +G V++G + VAVK L + ++ E+L E + ++
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEI 71
Query: 152 RHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAF 211
+HP+LV+L+G C + ++ EFM G+L ++L + + L +A + + +
Sbjct: 72 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 131
Query: 212 LHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAAPE 270
L + I+RD N L+ + K++DFGL++ M + H + + APE
Sbjct: 132 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPE 187
Query: 271 YISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVD 330
++ + KSDV++FGV+L E+ T S PY Y +
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELL 230
Query: 331 PRLAGQYSVKGAKEMAV-LALQCISVNPKDRPKMAAVVATLESLLN 375
+ +G E L C NP DRP A + E++
Sbjct: 231 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 124/286 (43%), Gaps = 30/286 (10%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+ + + LG G +G V++G + VAVK L + ++ E+L E + ++
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEI 67
Query: 152 RHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAF 211
+HP+LV+L+G C + ++ EFM G+L ++L + + L +A + + +
Sbjct: 68 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 127
Query: 212 LHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAAPE 270
L + I+RD N L+ + K++DFGL++ M + H + + APE
Sbjct: 128 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKF--PIKWTAPE 183
Query: 271 YISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVD 330
++ + KSDV++FGV+L E+ T S PY Y +
Sbjct: 184 SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELL 226
Query: 331 PRLAGQYSVKGAKEMAV-LALQCISVNPKDRPKMAAVVATLESLLN 375
+ +G E L C NP DRP A + E++
Sbjct: 227 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 272
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 15/231 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQ-LRHPHLV 157
LGEG +G V + +AVAVK++D++ E + + I + + L H ++V
Sbjct: 14 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+ G+ E + L E+ G L + + I + P R + A G+ +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
+ +RD K N+LLD K+SDFGLA + + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 278 TTKS-DVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDW--AKPYLRSSRRL 325
+ DV+S G+VL +L G D+ S Q DW K YL +++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 124/286 (43%), Gaps = 30/286 (10%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+ + + LG G +G V++G + VAVK L + ++ E+L E + ++
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEI 71
Query: 152 RHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAF 211
+HP+LV+L+G C + ++ EFM G+L ++L + + L +A + + +
Sbjct: 72 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 131
Query: 212 LHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAAPE 270
L + I+RD N L+ + K++DFGL++ M + H + + APE
Sbjct: 132 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPE 187
Query: 271 YISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVD 330
++ + KSDV++FGV+L E+ T S PY Y +
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELL 230
Query: 331 PRLAGQYSVKGAKEMAV-LALQCISVNPKDRPKMAAVVATLESLLN 375
+ +G E L C NP DRP A + E++
Sbjct: 231 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 105/235 (44%), Gaps = 40/235 (17%)
Query: 69 DLAHTFGPDLYDFQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK 128
D+A F D + S+LR I G G FG V Y D+R ++ VA+K
Sbjct: 3 DVAELFFKDDPEKLFSDLREI----------GHGSFGAV---YFARDVRN---SEVVAIK 46
Query: 129 LLDIEGLQGHREW---LAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGS---LE 182
+ G Q + +W + EV FL +LRHP+ ++ G + LV E+ + LE
Sbjct: 47 KMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLE 106
Query: 183 NHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDF 242
H V + T GA +GLA+LH + +I+RD K NILL KL DF
Sbjct: 107 VHKKPLQEVEIAAVTH-----GALQGLAYLHS--HNMIHRDVKAGNILLSEPGLVKLGDF 159
Query: 243 GLAK-MGPEGSNTHVTTRVMGTYGYAAPEYI---STGHLTTKSDVYSFGVVLLEL 293
G A M P +GT + APE I G K DV+S G+ +EL
Sbjct: 160 GSASIMAP-------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 124/286 (43%), Gaps = 30/286 (10%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+ + + LG G +G V++G + VAVK L + ++ E+L E + ++
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEI 71
Query: 152 RHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAF 211
+HP+LV+L+G C + ++ EFM G+L ++L + + L +A + + +
Sbjct: 72 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 131
Query: 212 LHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAAPE 270
L + I+RD N L+ + K++DFGL++ M + H + + APE
Sbjct: 132 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPE 187
Query: 271 YISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVD 330
++ + KSDV++FGV+L E+ T S PY Y +
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELL 230
Query: 331 PRLAGQYSVKGAKEMAV-LALQCISVNPKDRPKMAAVVATLESLLN 375
+ +G E L C NP DRP A + E++
Sbjct: 231 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 56
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L+ + +P +G
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
L+F H V++RD K N+L++++ KL+DFGLA+ G T + T Y A
Sbjct: 116 LSFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRA 171
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 95/197 (48%), Gaps = 9/197 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE-WLAEVIFLGQLRHPHLV 157
+GEG FG VH+G + A AVA+K RE +L E + + Q HPH+V
Sbjct: 398 IGEGQFGDVHQGIY---MSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 454
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+LIG E+ ++ E G L + L R SL + + A + LA+L
Sbjct: 455 KLIGVITENP-VWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKR- 511
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
++RD N+L+ + KL DFGL++ E S + ++ + APE I+
Sbjct: 512 -FVHRDIAARNVLVSATDCVKLGDFGLSRYM-EDSTYYKASKGKLPIKWMAPESINFRRF 569
Query: 278 TTKSDVYSFGVVLLELL 294
T+ SDV+ FGV + E+L
Sbjct: 570 TSASDVWMFGVCMWEIL 586
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 122/273 (44%), Gaps = 28/273 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGL---QGHREWLAEVIFLGQLRHPH 155
LG+G FG V +G D K +VAVK L + L + +++ EV + L H +
Sbjct: 16 LGDGSFGVVRRGEWD---APSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
L+RL G ++ V E P GSL + L K L GT + A+ A+G+ +L
Sbjct: 73 LIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESK 130
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGT-YGYAAPEYIST 274
I+RD N+LL + K+ DFGL + P+ + +V + + APE + T
Sbjct: 131 R--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 275 GHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRL 333
+ SD + FGV L E+ T G+ L + +D + RL PR
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKID------KEGERL-----PR- 236
Query: 334 AGQYSVKGAKEMAVLALQCISVNPKDRPKMAAV 366
+++ + +QC + P+DRP A+
Sbjct: 237 ----PEDCPQDIYNVMVQCWAHKPEDRPTFVAL 265
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 124/286 (43%), Gaps = 30/286 (10%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+ + + LG G +G V++G + VAVK L + ++ E+L E + ++
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEI 66
Query: 152 RHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAF 211
+HP+LV+L+G C + ++ EFM G+L ++L + + L +A + + +
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 126
Query: 212 LHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAAPE 270
L + I+RD N L+ + K++DFGL++ M + H + + APE
Sbjct: 127 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPE 182
Query: 271 YISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVD 330
++ + KSDV++FGV+L E+ T S PY Y +
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELL 225
Query: 331 PRLAGQYSVKGAKEMAV-LALQCISVNPKDRPKMAAVVATLESLLN 375
+ +G E L C NP DRP A + E++
Sbjct: 226 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 108/231 (46%), Gaps = 15/231 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQ-LRHPHLV 157
LGEG +G V + +AVAVK++D++ E + + I + + L H ++V
Sbjct: 15 LGEGAYGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 68
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+ G+ E + L E+ G L + + I + P R + A G+ +LHG
Sbjct: 69 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
+ +RD K N+LLD K+SDFGLA + + + ++ GT Y APE +
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 278 TTKS-DVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDW--AKPYLRSSRRL 325
+ DV+S G+VL +L G D+ S Q DW K YL +++
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKEKKTYLNPWKKI 234
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 56
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L++ + +P +G
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G + T Y A
Sbjct: 116 LAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRA 171
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 124/286 (43%), Gaps = 30/286 (10%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+ + + LG G +G V++G + VAVK L + ++ E+L E + ++
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEI 66
Query: 152 RHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAF 211
+HP+LV+L+G C + ++ EFM G+L ++L + + L +A + + +
Sbjct: 67 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 126
Query: 212 LHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAAPE 270
L + I+RD N L+ + K++DFGL++ M + H + + APE
Sbjct: 127 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPE 182
Query: 271 YISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVD 330
++ + KSDV++FGV+L E+ T S PY Y +
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELL 225
Query: 331 PRLAGQYSVKGAKEMAV-LALQCISVNPKDRPKMAAVVATLESLLN 375
+ +G E L C NP DRP A + E++
Sbjct: 226 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 97/208 (46%), Gaps = 19/208 (9%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD---IEGLQGHREWLAEVIFLGQLRHPH 155
LG G FG V G L VAVK+L+ I L + E+ L RHPH
Sbjct: 19 LGVGTFGKVKIG------EHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
+++L + +V E++ G L +++ K V RL I +A H
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH-- 130
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTG 275
V++RD K N+LLD+ AK++DFGL+ M +G + G+ YAAPE IS G
Sbjct: 131 --MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPEVIS-G 184
Query: 276 HLTT--KSDVYSFGVVLLELLTGRRSMD 301
L + D++S GV+L LL G D
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 102/201 (50%), Gaps = 12/201 (5%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQLRHPHL 156
++G G G V G + G + VA+K L + R ++L+E +GQ HP++
Sbjct: 56 IIGSGDSGEVCYGRLR---VPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNI 112
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
+RL G ++V E+M GSL+ L + + + G G+ +L ++
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFL-RTHDGQFTIMQLVGMLRGVGAGMRYL--SD 169
Query: 217 NPVIYRDFKTSNILLDSDFTAKLSDFGLAKM---GPEGSNTHVTTRVMGTYGYAAPEYIS 273
++RD N+L+DS+ K+SDFGL+++ P+ + T ++ + APE I+
Sbjct: 170 LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKI--PIRWTAPEAIA 227
Query: 274 TGHLTTKSDVYSFGVVLLELL 294
++ SDV+SFGVV+ E+L
Sbjct: 228 FRTFSSASDVWSFGVVMWEVL 248
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 105/212 (49%), Gaps = 14/212 (6%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
N+ LGEG FG V Y Q + + + K+L +QG E E+ +L L
Sbjct: 9 NYQIVKTLGEGSFGKVKLAY-HTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLL 65
Query: 152 RHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAF 211
RHPH+++L +E ++V E+ L +++ +R +S R I +A + +
Sbjct: 66 RHPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISA--VEY 122
Query: 212 LHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEY 271
H + +++RD K N+LLD K++DFGL+ + +G+ + G+ YAAPE
Sbjct: 123 CH--RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEV 177
Query: 272 ISTGHLTT--KSDVYSFGVVLLELLTGRRSMD 301
IS G L + DV+S GV+L +L R D
Sbjct: 178 IS-GKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 102/218 (46%), Gaps = 15/218 (6%)
Query: 81 FQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE 140
F+ L+ I+Q LG+G FG+V D L A VAVK L G R+
Sbjct: 4 FEERHLKYISQ-------LGKGNFGSVELCRYDP-LGDNTGA-LVAVKQLQHSGPDQQRD 54
Query: 141 WLAEVIFLGQLRHPHLV--RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTR 198
+ E+ L L +V R + Y E LV E++P G L + L +R L
Sbjct: 55 FQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFL-QRHRARLDASRL 113
Query: 199 LKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTT 258
L + KG+ +L ++RD NIL++S+ K++DFGLAK+ P + V
Sbjct: 114 LLYSSQICKGMEYL--GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVR 171
Query: 259 RV-MGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE +S + +SDV+SFGVVL EL T
Sbjct: 172 EPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 122/273 (44%), Gaps = 28/273 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGL---QGHREWLAEVIFLGQLRHPH 155
LG+G FG V +G D K +VAVK L + L + +++ EV + L H +
Sbjct: 26 LGDGSFGVVRRGEWD---APSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
L+RL G ++ V E P GSL + L K L GT + A+ A+G+ +L
Sbjct: 83 LIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESK 140
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGT-YGYAAPEYIST 274
I+RD N+LL + K+ DFGL + P+ + +V + + APE + T
Sbjct: 141 R--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 198
Query: 275 GHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRL 333
+ SD + FGV L E+ T G+ L + +D + RL PR
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKID------KEGERL-----PR- 246
Query: 334 AGQYSVKGAKEMAVLALQCISVNPKDRPKMAAV 366
+++ + +QC + P+DRP A+
Sbjct: 247 ----PEDCPQDIYNVMVQCWAHKPEDRPTFVAL 275
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 121/279 (43%), Gaps = 30/279 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G +G V++G + VAVK L + ++ E+L E + +++HP+LV+
Sbjct: 26 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 78
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L+G C + ++ EFM G+L ++L + + L +A + + +L +
Sbjct: 79 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 136
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
I+RD N L+ + K++DFGL++ M + H + + APE ++
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKF 194
Query: 278 TTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAGQY 337
+ KSDV++FGV+L E+ T S PY Y + +
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELLEKDYRME 237
Query: 338 SVKGAKEMAV-LALQCISVNPKDRPKMAAVVATLESLLN 375
+G E L C NP DRP A + E++
Sbjct: 238 RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 124/286 (43%), Gaps = 30/286 (10%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+ + + LG G +G V++G + VAVK L + ++ E+L E + ++
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEI 66
Query: 152 RHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAF 211
+HP+LV+L+G C + ++ EFM G+L ++L + + L +A + + +
Sbjct: 67 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 126
Query: 212 LHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAAPE 270
L + I+RD N L+ + K++DFGL++ M + H + + APE
Sbjct: 127 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPE 182
Query: 271 YISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVD 330
++ + KSDV++FGV+L E+ T S PY Y +
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELL 225
Query: 331 PRLAGQYSVKGAKEMAV-LALQCISVNPKDRPKMAAVVATLESLLN 375
+ +G E L C NP DRP A + E++
Sbjct: 226 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 124/286 (43%), Gaps = 30/286 (10%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+ + + LG G +G V++G + VAVK L + ++ E+L E + ++
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEI 71
Query: 152 RHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAF 211
+HP+LV+L+G C + ++ EFM G+L ++L + + L +A + + +
Sbjct: 72 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 131
Query: 212 LHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAAPE 270
L + I+RD N L+ + K++DFGL++ M + H + + APE
Sbjct: 132 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPE 187
Query: 271 YISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVD 330
++ + KSDV++FGV+L E+ T S PY Y +
Sbjct: 188 SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELL 230
Query: 331 PRLAGQYSVKGAKEMAV-LALQCISVNPKDRPKMAAVVATLESLLN 375
+ +G E L C NP DRP A + E++
Sbjct: 231 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 133/302 (44%), Gaps = 29/302 (9%)
Query: 81 FQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE 140
F+ L+ I+Q LG+G FG+V D L A VAVK L G R+
Sbjct: 7 FEERHLKYISQ-------LGKGNFGSVELCRYDP-LGDNTGA-LVAVKQLQHSGPDQQRD 57
Query: 141 WLAEVIFLGQLRHPHLV--RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTR 198
+ E+ L L +V R + Y + LV E++P G L + L +R L
Sbjct: 58 FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL-QRHRARLDASRL 116
Query: 199 LKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTT 258
L + KG+ +L ++RD NIL++S+ K++DFGLAK+ P + +V
Sbjct: 117 LLYSSQICKGMEYL--GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVR 174
Query: 259 RV-MGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT-----GRRSMDKLRPK-SEQNL 311
+ APE +S + +SDV+SFGVVL EL T S + LR SE+++
Sbjct: 175 EPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDV 234
Query: 312 VDWAKPYLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLE 371
++ R P E+ L C + +P+DRP +A+ L+
Sbjct: 235 PALSRLLELLEEGQRLPAPPACPA--------EVHELMKLCWAPSPQDRPSFSALGPQLD 286
Query: 372 SL 373
L
Sbjct: 287 ML 288
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 124/286 (43%), Gaps = 30/286 (10%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+ + + LG G +G V++G + VAVK L + ++ E+L E + ++
Sbjct: 18 DITMKHKLGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEI 70
Query: 152 RHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAF 211
+HP+LV+L+G C + ++ EFM G+L ++L + + L +A + + +
Sbjct: 71 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 130
Query: 212 LHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAAPE 270
L + I+RD N L+ + K++DFGL++ M + H + + APE
Sbjct: 131 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPE 186
Query: 271 YISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVD 330
++ + KSDV++FGV+L E+ T S PY Y +
Sbjct: 187 SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELL 229
Query: 331 PRLAGQYSVKGAKEMAV-LALQCISVNPKDRPKMAAVVATLESLLN 375
+ +G E L C NP DRP A + E++
Sbjct: 230 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 275
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 124/286 (43%), Gaps = 30/286 (10%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+ + + LG G +G V++G + VAVK L + ++ E+L E + ++
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEI 66
Query: 152 RHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAF 211
+HP+LV+L+G C + ++ EFM G+L ++L + + L +A + + +
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 126
Query: 212 LHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAAPE 270
L + I+RD N L+ + K++DFGL++ M + H + + APE
Sbjct: 127 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPE 182
Query: 271 YISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVD 330
++ + KSDV++FGV+L E+ T S PY Y +
Sbjct: 183 SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELL 225
Query: 331 PRLAGQYSVKGAKEMAV-LALQCISVNPKDRPKMAAVVATLESLLN 375
+ +G E L C NP DRP A + E++
Sbjct: 226 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 122/273 (44%), Gaps = 28/273 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGL---QGHREWLAEVIFLGQLRHPH 155
LG+G FG V +G D K +VAVK L + L + +++ EV + L H +
Sbjct: 20 LGDGSFGVVRRGEWD---APSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
L+RL G ++ V E P GSL + L K L GT + A+ A+G+ +L
Sbjct: 77 LIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESK 134
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGT-YGYAAPEYIST 274
I+RD N+LL + K+ DFGL + P+ + +V + + APE + T
Sbjct: 135 R--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 275 GHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRL 333
+ SD + FGV L E+ T G+ L + +D + RL PR
Sbjct: 193 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKID------KEGERL-----PR- 240
Query: 334 AGQYSVKGAKEMAVLALQCISVNPKDRPKMAAV 366
+++ + +QC + P+DRP A+
Sbjct: 241 ----PEDCPQDIYNVMVQCWAHKPEDRPTFVAL 269
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 122/273 (44%), Gaps = 28/273 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGL---QGHREWLAEVIFLGQLRHPH 155
LG+G FG V +G D K +VAVK L + L + +++ EV + L H +
Sbjct: 16 LGDGSFGVVRRGEWD---APSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
L+RL G ++ V E P GSL + L K L GT + A+ A+G+ +L
Sbjct: 73 LIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESK 130
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGT-YGYAAPEYIST 274
I+RD N+LL + K+ DFGL + P+ + +V + + APE + T
Sbjct: 131 R--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 275 GHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRL 333
+ SD + FGV L E+ T G+ L + +D + RL PR
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKID------KEGERL-----PR- 236
Query: 334 AGQYSVKGAKEMAVLALQCISVNPKDRPKMAAV 366
+++ + +QC + P+DRP A+
Sbjct: 237 ----PEDCPQDIYNVMVQCWAHKPEDRPTFVAL 265
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 124/286 (43%), Gaps = 30/286 (10%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+ + + LG G +G V++G + VAVK L + ++ E+L E + ++
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEI 68
Query: 152 RHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAF 211
+HP+LV+L+G C + ++ EFM G+L ++L + + L +A + + +
Sbjct: 69 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 128
Query: 212 LHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAAPE 270
L + I+RD N L+ + K++DFGL++ M + H + + APE
Sbjct: 129 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPE 184
Query: 271 YISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVD 330
++ + KSDV++FGV+L E+ T S PY Y +
Sbjct: 185 SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELL 227
Query: 331 PRLAGQYSVKGAKEMAV-LALQCISVNPKDRPKMAAVVATLESLLN 375
+ +G E L C NP DRP A + E++
Sbjct: 228 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 273
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 102/201 (50%), Gaps = 12/201 (5%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQLRHPHL 156
++G G G V G + G + VA+K L + R ++L+E +GQ HP++
Sbjct: 56 IIGSGDSGEVCYGRLR---VPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNI 112
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
+RL G ++V E+M GSL+ L + + + G G+ +L ++
Sbjct: 113 IRLEGVVTRGRLAMIVTEYMENGSLDTFL-RTHDGQFTIMQLVGMLRGVGAGMRYL--SD 169
Query: 217 NPVIYRDFKTSNILLDSDFTAKLSDFGLAKM---GPEGSNTHVTTRVMGTYGYAAPEYIS 273
++RD N+L+DS+ K+SDFGL+++ P+ + T ++ + APE I+
Sbjct: 170 LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKI--PIRWTAPEAIA 227
Query: 274 TGHLTTKSDVYSFGVVLLELL 294
++ SDV+SFGVV+ E+L
Sbjct: 228 FRTFSSASDVWSFGVVMWEVL 248
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 121/279 (43%), Gaps = 30/279 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G +G V++G + VAVK L + ++ E+L E + +++HP+LV+
Sbjct: 21 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 73
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L+G C + ++ EFM G+L ++L + + L +A + + +L +
Sbjct: 74 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 131
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
I+RD N L+ + K++DFGL++ M + H + + APE ++
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKF 189
Query: 278 TTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAGQY 337
+ KSDV++FGV+L E+ T S PY Y + +
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELLEKDYRME 232
Query: 338 SVKGAKEMAV-LALQCISVNPKDRPKMAAVVATLESLLN 375
+G E L C NP DRP A + E++
Sbjct: 233 RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 5 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 58
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L+ + +P +G
Sbjct: 59 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G + T Y A
Sbjct: 118 LAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRA 173
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 103/218 (47%), Gaps = 15/218 (6%)
Query: 81 FQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE 140
F+ L+ I+Q LG+G FG+V D L A VAVK L G R+
Sbjct: 8 FEERHLKYISQ-------LGKGNFGSVELCRYDP-LGDNTGA-LVAVKQLQHSGPDQQRD 58
Query: 141 WLAEVIFLGQLRHPHLV--RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTR 198
+ E+ L L +V R + Y + LV E++P G L + L +R L
Sbjct: 59 FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL-QRHRARLDASRL 117
Query: 199 LKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTT 258
L + KG+ +L ++RD NIL++S+ K++DFGLAK+ P + +V
Sbjct: 118 LLYSSQICKGMEYL--GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVR 175
Query: 259 RV-MGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE +S + +SDV+SFGVVL EL T
Sbjct: 176 EPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 5 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 58
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L+ + +P +G
Sbjct: 59 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G + T Y A
Sbjct: 118 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRA 173
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 6 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 59
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L++ + +P +G
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G + T Y A
Sbjct: 119 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRA 174
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 124/286 (43%), Gaps = 30/286 (10%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+ + + LG G +G V++G + VAVK L + ++ E+L E + ++
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEI 68
Query: 152 RHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAF 211
+HP+LV+L+G C + ++ EFM G+L ++L + + L +A + + +
Sbjct: 69 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 128
Query: 212 LHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAAPE 270
L + I+RD N L+ + K++DFGL++ M + H + + APE
Sbjct: 129 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPE 184
Query: 271 YISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVD 330
++ + KSDV++FGV+L E+ T S PY Y +
Sbjct: 185 SLAYNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELL 227
Query: 331 PRLAGQYSVKGAKEMAV-LALQCISVNPKDRPKMAAVVATLESLLN 375
+ +G E L C NP DRP A + E++
Sbjct: 228 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 273
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 5 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 58
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L++ + +P +G
Sbjct: 59 KELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G + T Y A
Sbjct: 118 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRA 173
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 56
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L+ + +P +G
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G + T Y A
Sbjct: 116 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRA 171
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 56
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L+ + +P +G
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G + T Y A
Sbjct: 116 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRA 171
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 121/279 (43%), Gaps = 30/279 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G +G V++G + VAVK L + ++ E+L E + +++HP+LV+
Sbjct: 34 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 86
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L+G C + ++ EFM G+L ++L + + L +A + + +L +
Sbjct: 87 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 144
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
I+RD N L+ + K++DFGL++ M + H + + APE ++
Sbjct: 145 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKF 202
Query: 278 TTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAGQY 337
+ KSDV++FGV+L E+ T S PY Y + +
Sbjct: 203 SIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELLEKDYRME 245
Query: 338 SVKGAKEMAV-LALQCISVNPKDRPKMAAVVATLESLLN 375
+G E L C NP DRP A + E++
Sbjct: 246 RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 284
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 55
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L+ + +P +G
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G + T Y A
Sbjct: 115 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRA 170
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 128/298 (42%), Gaps = 27/298 (9%)
Query: 83 LSELRAIT-QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW 141
+S+L+ + +N + LG G FG V++G + Q L ++ Q ++
Sbjct: 22 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 81
Query: 142 LAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFK---RIS--VSLPWG 196
L E + + +L H ++VR IG + R ++ E M G L++ L + R S SL
Sbjct: 82 LMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 141
Query: 197 TRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSD---FTAKLSDFGLAKMGPEGSN 253
L +A A G +L EN I+RD N LL AK+ DFG+A+ S
Sbjct: 142 DLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 199
Query: 254 THVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVD 313
M + PE G T+K+D +SFGV+L E+ + KS Q +++
Sbjct: 200 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQEVLE 257
Query: 314 WAKPYLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLE 371
++ S R+ DP + + QC P+DRP A ++ +E
Sbjct: 258 ----FVTSGGRM----DP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 103/218 (47%), Gaps = 15/218 (6%)
Query: 81 FQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE 140
F+ L+ I+Q LG+G FG+V D L A VAVK L G R+
Sbjct: 20 FEERHLKYISQ-------LGKGNFGSVELCRYDP-LGDNTGA-LVAVKQLQHSGPDQQRD 70
Query: 141 WLAEVIFLGQLRHPHLV--RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTR 198
+ E+ L L +V R + Y + LV E++P G L + L +R L
Sbjct: 71 FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL-QRHRARLDASRL 129
Query: 199 LKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTT 258
L + KG+ +L ++RD NIL++S+ K++DFGLAK+ P + +V
Sbjct: 130 LLYSSQICKGMEYL--GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVR 187
Query: 259 RV-MGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE +S + +SDV+SFGVVL EL T
Sbjct: 188 EPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 56
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L+ + +P +G
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G + T Y A
Sbjct: 116 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRA 171
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 6 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 59
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L+ + +P +G
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G + T Y A
Sbjct: 119 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRA 174
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 5 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 58
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L+ + +P +G
Sbjct: 59 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G + T Y A
Sbjct: 118 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRA 173
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+ LD E + E+ L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALXKIRLDTETEGVPSTAIREISLL 56
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L+ + +P +G
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G T + T Y A
Sbjct: 116 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRA 171
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 55
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L+ + +P +G
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G + T Y A
Sbjct: 115 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRA 170
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+ LD E + E+ L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALXKIRLDTETEGVPSTAIREISLL 55
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L+ + +P +G
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G T + T Y A
Sbjct: 115 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRA 170
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 128/298 (42%), Gaps = 27/298 (9%)
Query: 83 LSELRAIT-QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW 141
+S+L+ + +N + LG G FG V++G + Q L ++ Q ++
Sbjct: 36 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 95
Query: 142 LAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFK---RIS--VSLPWG 196
L E + + +L H ++VR IG + R ++ E M G L++ L + R S SL
Sbjct: 96 LMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 155
Query: 197 TRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDF---TAKLSDFGLAKMGPEGSN 253
L +A A G +L EN I+RD N LL AK+ DFG+A+ S
Sbjct: 156 DLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 213
Query: 254 THVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVD 313
M + PE G T+K+D +SFGV+L E+ + KS Q +++
Sbjct: 214 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQEVLE 271
Query: 314 WAKPYLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLE 371
++ S R+ DP + + QC P+DRP A ++ +E
Sbjct: 272 ----FVTSGGRM----DP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 4 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 57
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L+ + +P +G
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G + T Y A
Sbjct: 117 LAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRA 172
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 105/209 (50%), Gaps = 22/209 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQA-VAVKLLDIEGLQG---HREWLAEVIFLGQLRHP 154
LGEG FG V L K Q VA+K + + L+ H E+ +L LRHP
Sbjct: 17 LGEGSFGKVK-------LATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHP 69
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
H+++L + ++V E+ G L +++ ++ ++ G R I A + + H
Sbjct: 70 HIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICA--IEYCH- 125
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +++RD K N+LLD + K++DFGL+ + +G+ + G+ YAAPE I+
Sbjct: 126 -RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPEVIN- 180
Query: 275 GHLTT--KSDVYSFGVVLLELLTGRRSMD 301
G L + DV+S G+VL +L GR D
Sbjct: 181 GKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 133/275 (48%), Gaps = 30/275 (10%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQ 150
+F LG G G V K + +A KL+ +E R + + E+ L +
Sbjct: 7 DFEKISELGAGNGGVVFK------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 151 LRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLA 210
P++V G D E + E M GSL+ L K + +P K++I KGL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLT 118
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLA-KMGPEGSNTHVTTRVMGTYGYAAP 269
+L ++ +++RD K SNIL++S KL DFG++ ++ +N+ V TR Y +P
Sbjct: 119 YLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-----SYMSP 172
Query: 270 EYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIV 329
E + H + +SD++S G+ L+E+ GR + P ++++ ++P + L YIV
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP--PDAKED----SRPPMAIFELLDYIV 226
Query: 330 D---PRL-AGQYSVKGAKEMAVLALQCISVNPKDR 360
+ P+L +G +S+ E +C+ NP +R
Sbjct: 227 NEPPPKLPSGVFSL----EFQDFVNKCLIKNPAER 257
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 125/292 (42%), Gaps = 42/292 (14%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+ + + LG G +G V++G + VAVK L + ++ E+L E + ++
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEI 67
Query: 152 RHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAF 211
+HP+LV+L+G C + ++ EFM G+L ++L + + L +A + + +
Sbjct: 68 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 127
Query: 212 LHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKM-------GPEGSNTHVTTRVMGTY 264
L + I+RD N L+ + K++DFGL+++ P G+ +
Sbjct: 128 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK------- 178
Query: 265 GYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRR 324
+ APE ++ + KSDV++FGV+L E+ T S PY
Sbjct: 179 -WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLS 220
Query: 325 LRYIVDPRLAGQYSVKGAKEMAV-LALQCISVNPKDRPKMAAVVATLESLLN 375
Y + + +G E L C NP DRP A + E++
Sbjct: 221 QVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 272
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 4 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 57
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L+ + +P +G
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G + T Y A
Sbjct: 117 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRA 172
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 121/278 (43%), Gaps = 30/278 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G +G V++G + VAVK L + ++ E+L E + +++HP+LV+
Sbjct: 21 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 73
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L+G C + ++ EFM G+L ++L + + L +A + + +L +
Sbjct: 74 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 131
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
I+RD N L+ + K++DFGL++ M + H + + APE ++
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKF 189
Query: 278 TTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAGQY 337
+ KSDV++FGV+L E+ T S PY Y + +
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELLEKDYRME 232
Query: 338 SVKGAKEMAV-LALQCISVNPKDRPKMAAVVATLESLL 374
+G E L C NP DRP A + E++
Sbjct: 233 RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 6 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 59
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L+ + +P +G
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G + T Y A
Sbjct: 119 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRA 174
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 7 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 60
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L+ + +P +G
Sbjct: 61 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 119
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G + T Y A
Sbjct: 120 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRA 175
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 112/220 (50%), Gaps = 11/220 (5%)
Query: 92 NFSSNYLLGEGGFGTVHKG-YIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQ 150
F +LG G FGTV+KG +I + + +K ++L + + ++E L E +
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEG--EKVKIPVAIMELREATSPKANKEILDEAYVMAS 107
Query: 151 LRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLA 210
+ +PH+ RL+G C +L+ + MP G L +++ + ++ L + AKG+
Sbjct: 108 VDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGMN 165
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAAP 269
+L + +++RD N+L+ + K++DFGLAK +G E H + + A
Sbjct: 166 YLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KWMAL 222
Query: 270 EYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSE 308
E I T +SDV+S+GV + EL+T G + D + P SE
Sbjct: 223 ESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASE 261
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 6 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 59
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L+ + +P +G
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G + T Y A
Sbjct: 119 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRA 174
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 125/292 (42%), Gaps = 42/292 (14%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+ + + LG G +G V++G + VAVK L + ++ E+L E + ++
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEI 68
Query: 152 RHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAF 211
+HP+LV+L+G C + ++ EFM G+L ++L + + L +A + + +
Sbjct: 69 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 128
Query: 212 LHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKM-------GPEGSNTHVTTRVMGTY 264
L + I+RD N L+ + K++DFGL+++ P G+ +
Sbjct: 129 LE--KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK------- 179
Query: 265 GYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRR 324
+ APE ++ + KSDV++FGV+L E+ T S PY
Sbjct: 180 -WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLS 221
Query: 325 LRYIVDPRLAGQYSVKGAKEMAV-LALQCISVNPKDRPKMAAVVATLESLLN 375
Y + + +G E L C NP DRP A + E++
Sbjct: 222 QVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 273
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 114/221 (51%), Gaps = 13/221 (5%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQ-AVAVK-LLDIEGLQGHREWLAEVIFLG 149
F +LG G FGTV+KG + +G K + VA+K L + + ++E L E +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 76
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL 209
+ +PH+ RL+G C +L++ + MP G L +++ + ++ L + AKG+
Sbjct: 77 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGM 134
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAA 268
+L + +++RD N+L+ + K++DFGLAK +G E H + + A
Sbjct: 135 NYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KWMA 191
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSE 308
E I T +SDV+S+GV + EL+T G + D + P SE
Sbjct: 192 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASE 231
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 97/208 (46%), Gaps = 19/208 (9%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD---IEGLQGHREWLAEVIFLGQLRHPH 155
LG G FG V G L VAVK+L+ I L + E+ L RHPH
Sbjct: 19 LGVGTFGKVKIG------EHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
+++L + +V E++ G L +++ K V RL I +A H
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH-- 130
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTG 275
V++RD K N+LLD+ AK++DFGL+ M +G + G+ YAAPE IS G
Sbjct: 131 --MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSPNYAAPEVIS-G 184
Query: 276 HLTT--KSDVYSFGVVLLELLTGRRSMD 301
L + D++S GV+L LL G D
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 4 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 57
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L+ + +P +G
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G + T Y A
Sbjct: 117 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRA 172
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 3 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 56
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L+ + +P +G
Sbjct: 57 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ T+ V T Y A
Sbjct: 116 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRA 171
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 6 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 59
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L+ + +P +G
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G + T Y A
Sbjct: 119 LAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRA 174
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 121/273 (44%), Gaps = 28/273 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGL---QGHREWLAEVIFLGQLRHPH 155
LG+G FG V +G D K +VAVK L + L + +++ EV + L H +
Sbjct: 16 LGDGSFGVVRRGEWD---APSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
L+RL G ++ V E P GSL + L K L GT + A+ A+G+ +L
Sbjct: 73 LIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESK 130
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGT-YGYAAPEYIST 274
I+RD N+LL + K+ DFGL + P+ + V + + APE + T
Sbjct: 131 R--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 275 GHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRL 333
+ SD + FGV L E+ T G+ L + +D + RL PR
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKID------KEGERL-----PR- 236
Query: 334 AGQYSVKGAKEMAVLALQCISVNPKDRPKMAAV 366
+++ + +QC + P+DRP A+
Sbjct: 237 ----PEDCPQDIYNVMVQCWAHKPEDRPTFVAL 265
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 114/221 (51%), Gaps = 13/221 (5%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQA-VAVK-LLDIEGLQGHREWLAEVIFLG 149
F +LG G FGTV+KG + +G K + VA+K L + + ++E L E +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 73
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL 209
+ +PH+ RL+G C +L++ + MP G L +++ + ++ L + AKG+
Sbjct: 74 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGM 131
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAA 268
+L + +++RD N+L+ + K++DFGLAK +G E H + + A
Sbjct: 132 NYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KWMA 188
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSE 308
E I T +SDV+S+GV + EL+T G + D + P SE
Sbjct: 189 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASE 228
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 4 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 57
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+EF+ L+ + +P +G
Sbjct: 58 KELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G + T Y A
Sbjct: 117 LAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRA 172
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 114/221 (51%), Gaps = 13/221 (5%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQA-VAVK-LLDIEGLQGHREWLAEVIFLG 149
F +LG G FGTV+KG + +G K + VA+K L + + ++E L E +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 74
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL 209
+ +PH+ RL+G C +L++ + MP G L +++ + ++ L + AKG+
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGM 132
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAA 268
+L + +++RD N+L+ + K++DFGLAK +G E H + + A
Sbjct: 133 NYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KWMA 189
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSE 308
E I T +SDV+S+GV + EL+T G + D + P SE
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASE 229
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 107/231 (46%), Gaps = 15/231 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQ-LRHPHLV 157
LGEG G V + +AVAVK++D++ E + + I + + L H ++V
Sbjct: 14 LGEGAAGEVQLAV------NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVV 67
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+ G+ E + L E+ G L + + I + P R + A G+ +LHG
Sbjct: 68 KFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
+ +RD K N+LLD K+SDFGLA + + + ++ GT Y APE +
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 278 TTKS-DVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDW--AKPYLRSSRRL 325
+ DV+S G+VL +L G D+ S Q DW K YL +++
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKEKKTYLNPWKKI 233
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 114/221 (51%), Gaps = 13/221 (5%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQA-VAVK-LLDIEGLQGHREWLAEVIFLG 149
F +LG G FGTV+KG + +G K + VA+K L + + ++E L E +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 73
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL 209
+ +PH+ RL+G C +L++ + MP G L +++ + ++ L + AKG+
Sbjct: 74 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYV-REHKDNIGSQYLLNWCVQIAKGM 131
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAA 268
+L + +++RD N+L+ + K++DFGLAK +G E H + + A
Sbjct: 132 NYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KWMA 188
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSE 308
E I T +SDV+S+GV + EL+T G + D + P SE
Sbjct: 189 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASE 228
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 128/289 (44%), Gaps = 37/289 (12%)
Query: 96 NYLLGEGGFGTVHKGYIDDDLRQG-LKAQAVAVKLLDIEGLQGHREWLAEVIF-----LG 149
N LG+G F + KG + G L V +K+LD + HR + +E F +
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLD----KAHRNY-SESFFEAASMMS 67
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFK-RISVSLPWGTRLKIAIGAAKG 208
+L H HLV G C +E +LV EF+ GSL+ +L K + +++ W +L++A A
Sbjct: 68 KLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAAA 125
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTR--VMGTYGY 266
+ FL EN +I+ + NILL + K + K+ G + V + + +
Sbjct: 126 MHFLE--ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPW 183
Query: 267 AAPEYIST-GHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRL 325
PE I +L +D +SFG L E+ +G +P S L S R+L
Sbjct: 184 VPPECIENPKNLNLATDKWSFGTTLWEICSGGD-----KPLSA----------LDSQRKL 228
Query: 326 RYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL 374
++ D Q A E+A L C+ P RP A++ L SL
Sbjct: 229 QFYEDRH---QLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLF 274
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 113/221 (51%), Gaps = 13/221 (5%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQA-VAVK-LLDIEGLQGHREWLAEVIFLG 149
F +LG G FGTV+KG + +G K + VA+K L + + ++E L E +
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 82
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL 209
+ +PH+ RL+G C +L+ + MP G L +++ + ++ L + AKG+
Sbjct: 83 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGM 140
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAA 268
+L + +++RD N+L+ + K++DFGLAK +G E H + + A
Sbjct: 141 NYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KWMA 197
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSE 308
E I T +SDV+S+GV + EL+T G + D + P SE
Sbjct: 198 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASE 237
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 121/280 (43%), Gaps = 35/280 (12%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ +A+K+L +E + EV
Sbjct: 13 EDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 66
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ PRG + L +++S T I A
Sbjct: 67 QSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-QKLSKFDEQRTATYIT-ELAN 124
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H VI+RD K N+LL S K++DFG + P T + GT Y
Sbjct: 125 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYL 178
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
PE I K D++S GV+ E L G +P E N + + Y R SR
Sbjct: 179 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEAN--TYQETYKRISRVEFT 229
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
D + +GA++ L + + NP RP + V+
Sbjct: 230 FPD------FVTEGARD---LISRLLKHNPSQRPMLREVL 260
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 114/221 (51%), Gaps = 13/221 (5%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQA-VAVK-LLDIEGLQGHREWLAEVIFLG 149
F +LG G FGTV+KG + +G K + VA+K L + + ++E L E +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 72
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL 209
+ +PH+ RL+G C +L++ + MP G L +++ + ++ L + AKG+
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGM 130
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAA 268
+L + +++RD N+L+ + K++DFGLAK +G E H + + A
Sbjct: 131 NYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KWMA 187
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSE 308
E I T +SDV+S+GV + EL+T G + D + P SE
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASE 227
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 121/273 (44%), Gaps = 28/273 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGL---QGHREWLAEVIFLGQLRHPH 155
LG+G FG V +G D K +VAVK L + L + +++ EV + L H +
Sbjct: 26 LGDGSFGVVRRGEWD---APSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
L+RL G ++ V E P GSL + L K L GT + A+ A+G+ +L
Sbjct: 83 LIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQVAEGMGYLESK 140
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGT-YGYAAPEYIST 274
I+RD N+LL + K+ DFGL + P+ + V + + APE + T
Sbjct: 141 R--FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 275 GHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRL 333
+ SD + FGV L E+ T G+ L + +D + RL PR
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKID------KEGERL-----PR- 246
Query: 334 AGQYSVKGAKEMAVLALQCISVNPKDRPKMAAV 366
+++ + +QC + P+DRP A+
Sbjct: 247 ----PEDCPQDIYNVMVQCWAHKPEDRPTFVAL 275
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 114/221 (51%), Gaps = 13/221 (5%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQA-VAVK-LLDIEGLQGHREWLAEVIFLG 149
F +LG G FGTV+KG + +G K + VA+K L + + ++E L E +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 75
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL 209
+ +PH+ RL+G C +L++ + MP G L +++ + ++ L + AKG+
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGM 133
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAA 268
+L + +++RD N+L+ + K++DFGLAK +G E H + + A
Sbjct: 134 NYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KWMA 190
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSE 308
E I T +SDV+S+GV + EL+T G + D + P SE
Sbjct: 191 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASE 230
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 108/220 (49%), Gaps = 12/220 (5%)
Query: 77 DLYDFQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQ 136
+LY + + + + + LG G +G V+ G + VAVK L + ++
Sbjct: 18 NLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKK------YSLTVAVKTLKEDTME 71
Query: 137 GHREWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWG 196
E+L E + +++HP+LV+L+G C + +V E+MP G+L ++L + +
Sbjct: 72 V-EEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAV 130
Query: 197 TRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTH 255
L +A + + +L + I+RD N L+ + K++DFGL++ M + H
Sbjct: 131 VLLYMATQISSAMEYLE--KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAH 188
Query: 256 VTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ + APE ++ + KSDV++FGV+L E+ T
Sbjct: 189 AGAKF--PIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 126/279 (45%), Gaps = 32/279 (11%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G +G V++G + VAVK L + ++ E+L E + +++HP+LV+
Sbjct: 228 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 280
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L+G C + ++ EFM G+L ++L + + L +A + + +L +
Sbjct: 281 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE--KKN 338
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
I+R+ N L+ + K++DFGL++ M + H + + APE ++
Sbjct: 339 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKF 396
Query: 278 TTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPY--LRSSRRLRYIVDPRLAG 335
+ KSDV++FGV+L E+ T S +D ++ Y L R+ R G
Sbjct: 397 SIKSDVWAFGVLLWEIAT--------YGMSPYPGIDLSQVYELLEKDYRME-----RPEG 443
Query: 336 QYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL 374
+++ L C NP DRP A + E++
Sbjct: 444 -----CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 104/200 (52%), Gaps = 15/200 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+G+G GTV+ D+ G Q VA++ ++++ + E++ + + ++P++V
Sbjct: 29 IGQGASGTVYTAM---DVATG---QEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
+ +E +V E++ GSL + + + + G + + L FLH N
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHS--NQ 137
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGL-AKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
VI+R+ K+ NILL D + KL+DFG A++ PE S + ++GT + APE ++
Sbjct: 138 VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVVTRKAY 194
Query: 278 TTKSDVYSFGVVLLELLTGR 297
K D++S G++ +E++ G
Sbjct: 195 GPKVDIWSLGIMAIEMIEGE 214
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 113/221 (51%), Gaps = 13/221 (5%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQA-VAVK-LLDIEGLQGHREWLAEVIFLG 149
F +LG G FGTV+KG + +G K + VA+K L + + ++E L E +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 79
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL 209
+ +PH+ RL+G C +L+ + MP G L +++ + ++ L + AKG+
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGM 137
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAA 268
+L + +++RD N+L+ + K++DFGLAK +G E H + + A
Sbjct: 138 NYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KWMA 194
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSE 308
E I T +SDV+S+GV + EL+T G + D + P SE
Sbjct: 195 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASE 234
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 113/221 (51%), Gaps = 13/221 (5%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQA-VAVK-LLDIEGLQGHREWLAEVIFLG 149
F +LG G FGTV+KG + +G K + VA+K L + + ++E L E +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 72
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL 209
+ +PH+ RL+G C +L+ + MP G L +++ + ++ L + AKG+
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGM 130
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAA 268
+L + +++RD N+L+ + K++DFGLAK +G E H + + A
Sbjct: 131 NYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KWMA 187
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSE 308
E I T +SDV+S+GV + EL+T G + D + P SE
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASE 227
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 113/221 (51%), Gaps = 13/221 (5%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQA-VAVK-LLDIEGLQGHREWLAEVIFLG 149
F +LG G FGTV+KG + +G K + VA+K L + + ++E L E +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 75
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL 209
+ +PH+ RL+G C +L+ + MP G L +++ + ++ L + AKG+
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGM 133
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAA 268
+L + +++RD N+L+ + K++DFGLAK +G E H + + A
Sbjct: 134 NYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KWMA 190
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSE 308
E I T +SDV+S+GV + EL+T G + D + P SE
Sbjct: 191 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASE 230
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 113/221 (51%), Gaps = 13/221 (5%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQA-VAVK-LLDIEGLQGHREWLAEVIFLG 149
F +LG G FGTV+KG + +G K + VA+K L + + ++E L E +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 74
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL 209
+ +PH+ RL+G C +L+ + MP G L +++ + ++ L + AKG+
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGM 132
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAA 268
+L + +++RD N+L+ + K++DFGLAK +G E H + + A
Sbjct: 133 NYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KWMA 189
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSE 308
E I T +SDV+S+GV + EL+T G + D + P SE
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASE 229
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 127/298 (42%), Gaps = 27/298 (9%)
Query: 83 LSELRAIT-QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW 141
+S+L+ + +N + LG G FG V++G + Q L ++ Q ++
Sbjct: 21 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 80
Query: 142 LAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFK---RIS--VSLPWG 196
L E + + + H ++VR IG + R ++ E M G L++ L + R S SL
Sbjct: 81 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 140
Query: 197 TRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSD---FTAKLSDFGLAKMGPEGSN 253
L +A A G +L EN I+RD N LL AK+ DFG+A+ S
Sbjct: 141 DLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 198
Query: 254 THVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVD 313
M + PE G T+K+D +SFGV+L E+ + KS Q +++
Sbjct: 199 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQEVLE 256
Query: 314 WAKPYLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLE 371
++ S R+ DP + + QC P+DRP A ++ +E
Sbjct: 257 ----FVTSGGRM----DP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 113/221 (51%), Gaps = 13/221 (5%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQA-VAVK-LLDIEGLQGHREWLAEVIFLG 149
F +LG G FGTV+KG + +G K + VA+K L + + ++E L E +
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 97
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL 209
+ +PH+ RL+G C +L+ + MP G L +++ + ++ L + AKG+
Sbjct: 98 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGM 155
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAA 268
+L + +++RD N+L+ + K++DFGLAK +G E H + + A
Sbjct: 156 NYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KWMA 212
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSE 308
E I T +SDV+S+GV + EL+T G + D + P SE
Sbjct: 213 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASE 252
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 113/221 (51%), Gaps = 13/221 (5%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQA-VAVK-LLDIEGLQGHREWLAEVIFLG 149
F +LG G FGTV+KG + +G K + VA+K L + + ++E L E +
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 78
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL 209
+ +PH+ RL+G C +L+ + MP G L +++ + ++ L + AKG+
Sbjct: 79 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGM 136
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAA 268
+L + +++RD N+L+ + K++DFGLAK +G E H + + A
Sbjct: 137 NYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KWMA 193
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSE 308
E I T +SDV+S+GV + EL+T G + D + P SE
Sbjct: 194 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASE 233
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 113/221 (51%), Gaps = 13/221 (5%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQA-VAVK-LLDIEGLQGHREWLAEVIFLG 149
F +LG G FGTV+KG + +G K + VA+K L + + ++E L E +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 75
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL 209
+ +PH+ RL+G C +L+ + MP G L +++ + ++ L + AKG+
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGM 133
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAA 268
+L + +++RD N+L+ + K++DFGLAK +G E H + + A
Sbjct: 134 NYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KWMA 190
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSE 308
E I T +SDV+S+GV + EL+T G + D + P SE
Sbjct: 191 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASE 230
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 127/298 (42%), Gaps = 27/298 (9%)
Query: 83 LSELRAIT-QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW 141
+S+L+ + +N + LG G FG V++G + Q L ++ Q ++
Sbjct: 13 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 72
Query: 142 LAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFK---RIS--VSLPWG 196
L E + + + H ++VR IG + R ++ E M G L++ L + R S SL
Sbjct: 73 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 132
Query: 197 TRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDF---TAKLSDFGLAKMGPEGSN 253
L +A A G +L EN I+RD N LL AK+ DFG+A+ S
Sbjct: 133 DLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 190
Query: 254 THVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVD 313
M + PE G T+K+D +SFGV+L E+ + KS Q +++
Sbjct: 191 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQEVLE 248
Query: 314 WAKPYLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLE 371
++ S R+ DP + + QC P+DRP A ++ +E
Sbjct: 249 ----FVTSGGRM----DP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 292
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 113/221 (51%), Gaps = 13/221 (5%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQA-VAVK-LLDIEGLQGHREWLAEVIFLG 149
F +LG G FGTV+KG + +G K + VA+K L + + ++E L E +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 75
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL 209
+ +PH+ RL+G C +L+ + MP G L +++ + ++ L + AKG+
Sbjct: 76 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGM 133
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAA 268
+L + +++RD N+L+ + K++DFGLAK +G E H + + A
Sbjct: 134 NYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KWMA 190
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSE 308
E I T +SDV+S+GV + EL+T G + D + P SE
Sbjct: 191 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASE 230
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 113/221 (51%), Gaps = 13/221 (5%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQA-VAVK-LLDIEGLQGHREWLAEVIFLG 149
F +LG G FGTV+KG + +G K + VA+K L + + ++E L E +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 72
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL 209
+ +PH+ RL+G C +L+ + MP G L +++ + ++ L + AKG+
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGM 130
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAA 268
+L + +++RD N+L+ + K++DFGLAK +G E H + + A
Sbjct: 131 NYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KWMA 187
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSE 308
E I T +SDV+S+GV + EL+T G + D + P SE
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASE 227
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 113/221 (51%), Gaps = 13/221 (5%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQA-VAVK-LLDIEGLQGHREWLAEVIFLG 149
F +LG G FGTV+KG + +G K + VA+K L + + ++E L E +
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 66
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL 209
+ +PH+ RL+G C +L+ + MP G L +++ + ++ L + AKG+
Sbjct: 67 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGM 124
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAA 268
+L + +++RD N+L+ + K++DFGLAK +G E H + + A
Sbjct: 125 NYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KWMA 181
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSE 308
E I T +SDV+S+GV + EL+T G + D + P SE
Sbjct: 182 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASE 221
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 113/221 (51%), Gaps = 13/221 (5%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQA-VAVK-LLDIEGLQGHREWLAEVIFLG 149
F +LG G FGTV+KG + +G K + VA+K L + + ++E L E +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 72
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL 209
+ +PH+ RL+G C +L+ + MP G L +++ + ++ L + AKG+
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYV-REHKDNIGSQYLLNWCVQIAKGM 130
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAA 268
+L + +++RD N+L+ + K++DFGLAK +G E H + + A
Sbjct: 131 NYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KWMA 187
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSE 308
E I T +SDV+S+GV + EL+T G + D + P SE
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASE 227
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 127/298 (42%), Gaps = 27/298 (9%)
Query: 83 LSELRAIT-QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW 141
+S+L+ + +N + LG G FG V++G + Q L ++ Q ++
Sbjct: 21 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 80
Query: 142 LAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFK---RIS--VSLPWG 196
L E + + + H ++VR IG + R ++ E M G L++ L + R S SL
Sbjct: 81 LMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAML 140
Query: 197 TRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSD---FTAKLSDFGLAKMGPEGSN 253
L +A A G +L EN I+RD N LL AK+ DFG+A+ S
Sbjct: 141 DLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 198
Query: 254 THVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVD 313
M + PE G T+K+D +SFGV+L E+ + KS Q +++
Sbjct: 199 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQEVLE 256
Query: 314 WAKPYLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLE 371
++ S R+ DP + + QC P+DRP A ++ +E
Sbjct: 257 ----FVTSGGRM----DP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 127/298 (42%), Gaps = 27/298 (9%)
Query: 83 LSELRAIT-QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW 141
+S+L+ + +N + LG G FG V++G + Q L ++ Q ++
Sbjct: 36 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDF 95
Query: 142 LAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFK---RIS--VSLPWG 196
L E + + + H ++VR IG + R ++ E M G L++ L + R S SL
Sbjct: 96 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 155
Query: 197 TRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDF---TAKLSDFGLAKMGPEGSN 253
L +A A G +L EN I+RD N LL AK+ DFG+A+ S
Sbjct: 156 DLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 213
Query: 254 THVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVD 313
M + PE G T+K+D +SFGV+L E+ + KS Q +++
Sbjct: 214 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQEVLE 271
Query: 314 WAKPYLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLE 371
++ S R+ DP + + QC P+DRP A ++ +E
Sbjct: 272 ----FVTSGGRM----DP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 126/279 (45%), Gaps = 32/279 (11%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G +G V++G + VAVK L + ++ E+L E + +++HP+LV+
Sbjct: 267 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 319
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L+G C + ++ EFM G+L ++L + + L +A + + +L +
Sbjct: 320 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 377
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
I+R+ N L+ + K++DFGL++ M + H + + APE ++
Sbjct: 378 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKF 435
Query: 278 TTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPY--LRSSRRLRYIVDPRLAG 335
+ KSDV++FGV+L E+ T S +D ++ Y L R+ R G
Sbjct: 436 SIKSDVWAFGVLLWEIAT--------YGMSPYPGIDLSQVYELLEKDYRME-----RPEG 482
Query: 336 QYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL 374
+++ L C NP DRP A + E++
Sbjct: 483 -----CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 516
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 127/298 (42%), Gaps = 27/298 (9%)
Query: 83 LSELRAIT-QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW 141
+S+L+ + +N + LG G FG V++G + Q L ++ Q ++
Sbjct: 22 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 81
Query: 142 LAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFK---RIS--VSLPWG 196
L E + + + H ++VR IG + R ++ E M G L++ L + R S SL
Sbjct: 82 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 141
Query: 197 TRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSD---FTAKLSDFGLAKMGPEGSN 253
L +A A G +L EN I+RD N LL AK+ DFG+A+ S
Sbjct: 142 DLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 199
Query: 254 THVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVD 313
M + PE G T+K+D +SFGV+L E+ + KS Q +++
Sbjct: 200 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQEVLE 257
Query: 314 WAKPYLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLE 371
++ S R+ DP + + QC P+DRP A ++ +E
Sbjct: 258 ----FVTSGGRM----DP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 121/278 (43%), Gaps = 30/278 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G +G V++G + VAVK L + ++ E+L E + +++HP+LV+
Sbjct: 225 LGGGQYGEVYEGVWKK------YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQ 277
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L+G C + ++ EFM G+L ++L + + L +A + + +L +
Sbjct: 278 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE--KKN 335
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAAPEYISTGHL 277
I+R+ N L+ + K++DFGL++ M + H + + APE ++
Sbjct: 336 FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKF--PIKWTAPESLAYNKF 393
Query: 278 TTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAGQY 337
+ KSDV++FGV+L E+ T S PY Y + +
Sbjct: 394 SIKSDVWAFGVLLWEIATYGMS-----------------PYPGIDLSQVYELLEKDYRME 436
Query: 338 SVKGAKEMAV-LALQCISVNPKDRPKMAAVVATLESLL 374
+G E L C NP DRP A + E++
Sbjct: 437 RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 474
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 127/298 (42%), Gaps = 27/298 (9%)
Query: 83 LSELRAIT-QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW 141
+S+L+ + +N + LG G FG V++G + Q L ++ Q ++
Sbjct: 36 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 95
Query: 142 LAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFK---RIS--VSLPWG 196
L E + + + H ++VR IG + R ++ E M G L++ L + R S SL
Sbjct: 96 LMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAML 155
Query: 197 TRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDF---TAKLSDFGLAKMGPEGSN 253
L +A A G +L EN I+RD N LL AK+ DFG+A+ S
Sbjct: 156 DLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 213
Query: 254 THVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVD 313
M + PE G T+K+D +SFGV+L E+ + KS Q +++
Sbjct: 214 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQEVLE 271
Query: 314 WAKPYLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLE 371
++ S R+ DP + + QC P+DRP A ++ +E
Sbjct: 272 ----FVTSGGRM----DP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 15/204 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G + TV+KG + G+ VKL EG + E+ + +L+H ++VR
Sbjct: 13 LGNGTYATVYKGL---NKTTGVYVALKEVKLDSEEGTPSTA--IREISLMKELKHENIVR 67
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA----IGAAKGLAFLHG 214
L + + LV+EFM L+ ++ R + P G L + +GLAF H
Sbjct: 68 LYDVIHTENKLTLVFEFM-DNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH- 125
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYI-S 273
EN +++RD K N+L++ KL DFGLA+ NT + V T Y AP+ +
Sbjct: 126 -ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV--TLWYRAPDVLMG 182
Query: 274 TGHLTTKSDVYSFGVVLLELLTGR 297
+ +T D++S G +L E++TG+
Sbjct: 183 SRTYSTSIDIWSCGCILAEMITGK 206
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 2 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 55
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+E + L+ + +P +G
Sbjct: 56 KELNHPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G T + T Y A
Sbjct: 115 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRA 170
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 127/298 (42%), Gaps = 27/298 (9%)
Query: 83 LSELRAIT-QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW 141
+S+L+ + +N + LG G FG V++G + Q L ++ Q ++
Sbjct: 22 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 81
Query: 142 LAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFK---RIS--VSLPWG 196
L E + + + H ++VR IG + R ++ E M G L++ L + R S SL
Sbjct: 82 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 141
Query: 197 TRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSD---FTAKLSDFGLAKMGPEGSN 253
L +A A G +L EN I+RD N LL AK+ DFG+A+ S
Sbjct: 142 DLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASY 199
Query: 254 THVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVD 313
M + PE G T+K+D +SFGV+L E+ + KS Q +++
Sbjct: 200 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQEVLE 257
Query: 314 WAKPYLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLE 371
++ S R+ DP + + QC P+DRP A ++ +E
Sbjct: 258 ----FVTSGGRM----DP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 127/298 (42%), Gaps = 27/298 (9%)
Query: 83 LSELRAIT-QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW 141
+S+L+ + +N + LG G FG V++G + Q L ++ Q ++
Sbjct: 28 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 87
Query: 142 LAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFK---RIS--VSLPWG 196
L E + + + H ++VR IG + R ++ E M G L++ L + R S SL
Sbjct: 88 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 147
Query: 197 TRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSD---FTAKLSDFGLAKMGPEGSN 253
L +A A G +L EN I+RD N LL AK+ DFG+A+ S
Sbjct: 148 DLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 205
Query: 254 THVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVD 313
M + PE G T+K+D +SFGV+L E+ + KS Q +++
Sbjct: 206 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQEVLE 263
Query: 314 WAKPYLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLE 371
++ S R+ DP + + QC P+DRP A ++ +E
Sbjct: 264 ----FVTSGGRM----DP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 307
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 127/298 (42%), Gaps = 27/298 (9%)
Query: 83 LSELRAIT-QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW 141
+S+L+ + +N + LG G FG V++G + Q L ++ Q ++
Sbjct: 48 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 107
Query: 142 LAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFK---RIS--VSLPWG 196
L E + + + H ++VR IG + R ++ E M G L++ L + R S SL
Sbjct: 108 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 167
Query: 197 TRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSD---FTAKLSDFGLAKMGPEGSN 253
L +A A G +L EN I+RD N LL AK+ DFG+A+ S
Sbjct: 168 DLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 225
Query: 254 THVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVD 313
M + PE G T+K+D +SFGV+L E+ + KS Q +++
Sbjct: 226 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQEVLE 283
Query: 314 WAKPYLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLE 371
++ S R+ DP + + QC P+DRP A ++ +E
Sbjct: 284 ----FVTSGGRM----DP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 327
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 121/265 (45%), Gaps = 33/265 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLA-EVIFLGQLRHPHLV 157
+G+G FG V KG ID+ ++ VA+K++D+E + E + E+ L Q P++
Sbjct: 30 IGKGSFGEVFKG-IDNRTQK-----VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+ G +D + ++ E++ GS + L T L+ + KGL +LH +
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDYLHSEKK 140
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVT-TRVMGTYGYAAPEYISTGH 276
I+RD K +N+LL KL+DFG+A + ++T + +GT + APE I
Sbjct: 141 --IHRDIKAANVLLSEHGEVKLADFGVAG---QLTDTQIKRNXFVGTPFWMAPEVIKQSA 195
Query: 277 LTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAGQ 336
+K+D++S G+ +EL G +L P L+ P P L G
Sbjct: 196 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLEGN 242
Query: 337 YSVKGAKEMAVLALQCISVNPKDRP 361
YS K + C++ P RP
Sbjct: 243 YS----KPLKEFVEACLNKEPSFRP 263
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 127/298 (42%), Gaps = 27/298 (9%)
Query: 83 LSELRAIT-QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW 141
+S+L+ + +N + LG G FG V++G + Q L ++ Q ++
Sbjct: 38 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 97
Query: 142 LAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFK---RIS--VSLPWG 196
L E + + + H ++VR IG + R ++ E M G L++ L + R S SL
Sbjct: 98 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 157
Query: 197 TRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSD---FTAKLSDFGLAKMGPEGSN 253
L +A A G +L EN I+RD N LL AK+ DFG+A+ S
Sbjct: 158 DLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY 215
Query: 254 THVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVD 313
M + PE G T+K+D +SFGV+L E+ + KS Q +++
Sbjct: 216 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQEVLE 273
Query: 314 WAKPYLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLE 371
++ S R+ DP + + QC P+DRP A ++ +E
Sbjct: 274 ----FVTSGGRM----DP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 317
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 128/289 (44%), Gaps = 37/289 (12%)
Query: 96 NYLLGEGGFGTVHKGYIDDDLRQG-LKAQAVAVKLLDIEGLQGHREWLAEVIF-----LG 149
N LG+G F + KG + G L V +K+LD + HR + +E F +
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLD----KAHRNY-SESFFEAASMMS 67
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFK-RISVSLPWGTRLKIAIGAAKG 208
+L H HLV G C +E +LV EF+ GSL+ +L K + +++ W +L++A A
Sbjct: 68 KLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWA 125
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTR--VMGTYGY 266
+ FL EN +I+ + NILL + K + K+ G + V + + +
Sbjct: 126 MHFLE--ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPW 183
Query: 267 AAPEYIST-GHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRL 325
PE I +L +D +SFG L E+ +G +P S L S R+L
Sbjct: 184 VPPECIENPKNLNLATDKWSFGTTLWEICSGGD-----KPLSA----------LDSQRKL 228
Query: 326 RYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL 374
++ D Q A E+A L C+ P RP A++ L SL
Sbjct: 229 QFYEDRH---QLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLF 274
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 121/265 (45%), Gaps = 33/265 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLA-EVIFLGQLRHPHLV 157
+G+G FG V KG ID+ ++ VA+K++D+E + E + E+ L Q P++
Sbjct: 15 IGKGSFGEVFKG-IDNRTQK-----VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+ G +D + ++ E++ GS + L T L+ + KGL +LH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDYLHSEKK 125
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVT-TRVMGTYGYAAPEYISTGH 276
I+RD K +N+LL KL+DFG+A + ++T + +GT + APE I
Sbjct: 126 --IHRDIKAANVLLSEHGEVKLADFGVAG---QLTDTQIKRNXFVGTPFWMAPEVIKQSA 180
Query: 277 LTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAGQ 336
+K+D++S G+ +EL G +L P L+ P P L G
Sbjct: 181 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLEGN 227
Query: 337 YSVKGAKEMAVLALQCISVNPKDRP 361
YS K + C++ P RP
Sbjct: 228 YS----KPLKEFVEACLNKEPSFRP 248
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 121/265 (45%), Gaps = 33/265 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLA-EVIFLGQLRHPHLV 157
+G+G FG V KG ID+ ++ VA+K++D+E + E + E+ L Q P++
Sbjct: 15 IGKGSFGEVFKG-IDNRTQK-----VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+ G +D + ++ E++ GS + L T L+ + KGL +LH +
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDYLHSEKK 125
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVT-TRVMGTYGYAAPEYISTGH 276
I+RD K +N+LL KL+DFG+A + ++T + +GT + APE I
Sbjct: 126 --IHRDIKAANVLLSEHGEVKLADFGVAG---QLTDTQIKRNTFVGTPFWMAPEVIKQSA 180
Query: 277 LTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAGQ 336
+K+D++S G+ +EL G +L P L+ P P L G
Sbjct: 181 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLEGN 227
Query: 337 YSVKGAKEMAVLALQCISVNPKDRP 361
YS K + C++ P RP
Sbjct: 228 YS----KPLKEFVEACLNKEPSFRP 248
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 128/288 (44%), Gaps = 34/288 (11%)
Query: 83 LSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EW 141
L EL+ +F LG G G V K + +A KL+ +E R +
Sbjct: 3 LGELK--DDDFEKISELGAGNGGVVFK------VSHKPSGLVMARKLIHLEIKPAIRNQI 54
Query: 142 LAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKI 201
+ E+ L + P++V G D E + E M GSL+ L K + +P K+
Sbjct: 55 IRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKV 112
Query: 202 AIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLA-KMGPEGSNTHVTTRV 260
+I KGL +L ++ +++RD K SNIL++S KL DFG++ ++ E +N V TR
Sbjct: 113 SIAVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTR- 170
Query: 261 MGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLR 320
Y +PE + H + +SD++S G+ L+E+ GR + +P +
Sbjct: 171 ----SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR----------------YPRPPMA 210
Query: 321 SSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVA 368
L YIV+ S + E +C+ NP +R + ++
Sbjct: 211 IFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMV 258
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 121/280 (43%), Gaps = 35/280 (12%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ +A+K+L +E + EV
Sbjct: 8 EDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ P G++ L +++S T I A
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELAN 119
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H VI+RD K N+LL S K++DFG + P T + GT Y
Sbjct: 120 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELC----GTLDYL 173
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
PE I K D++S GV+ E L G +P E N + + Y R SR
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEAN--TYQETYKRISRVEFT 224
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
D + +GA++ L + + NP RP + V+
Sbjct: 225 FPD------FVTEGARD---LISRLLKHNPSQRPMLREVL 255
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 120/265 (45%), Gaps = 33/265 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLA-EVIFLGQLRHPHLV 157
+G+G FG V+KG ID+ ++ VA+K++D+E + E + E+ L Q P++
Sbjct: 27 IGKGSFGEVYKG-IDNHTKE-----VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
R G + + ++ E++ GS + L T L+ + KGL +LH
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREIL---KGLDYLHSERK 137
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVT-TRVMGTYGYAAPEYISTGH 276
I+RD K +N+LL KL+DFG+A + ++T + +GT + APE I
Sbjct: 138 --IHRDIKAANVLLSEQGDVKLADFGVAG---QLTDTQIKRNXFVGTPFWMAPEVIKQSA 192
Query: 277 LTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAGQ 336
K+D++S G+ +EL G L P L+ P P L GQ
Sbjct: 193 YDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP-------------PTLEGQ 239
Query: 337 YSVKGAKEMAVLALQCISVNPKDRP 361
+S K C++ +P+ RP
Sbjct: 240 HS----KPFKEFVEACLNKDPRFRP 260
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 121/265 (45%), Gaps = 33/265 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLA-EVIFLGQLRHPHLV 157
+G+G FG V KG ID+ ++ VA+K++D+E + E + E+ L Q P++
Sbjct: 35 IGKGSFGEVFKG-IDNRTQK-----VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+ G +D + ++ E++ GS + L T L+ + KGL +LH +
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDYLHSEKK 145
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVT-TRVMGTYGYAAPEYISTGH 276
I+RD K +N+LL KL+DFG+A + ++T + +GT + APE I
Sbjct: 146 --IHRDIKAANVLLSEHGEVKLADFGVAG---QLTDTQIKRNTFVGTPFWMAPEVIKQSA 200
Query: 277 LTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAGQ 336
+K+D++S G+ +EL G +L P L+ P P L G
Sbjct: 201 YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLEGN 247
Query: 337 YSVKGAKEMAVLALQCISVNPKDRP 361
YS K + C++ P RP
Sbjct: 248 YS----KPLKEFVEACLNKEPSFRP 268
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 113/221 (51%), Gaps = 13/221 (5%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQA-VAVK-LLDIEGLQGHREWLAEVIFLG 149
F +LG G FGTV+KG + +G K + VA+K L + + ++E L E +
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 69
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL 209
+ +PH+ RL+G C +L+ + MP G L +++ + ++ L + A+G+
Sbjct: 70 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAEGM 127
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAA 268
+L + +++RD N+L+ + K++DFGLAK +G E H + + A
Sbjct: 128 NYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KWMA 184
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSE 308
E I T +SDV+S+GV + EL+T G + D + P SE
Sbjct: 185 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASE 224
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 120/280 (42%), Gaps = 35/280 (12%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ +A+K+L +E + EV
Sbjct: 13 EDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 66
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ PRG + L +++S T I A
Sbjct: 67 QSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL-QKLSKFDEQRTATYIT-ELAN 124
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H VI+RD K N+LL S K++DFG + P + GT Y
Sbjct: 125 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLXGTLDYL 178
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
PE I K D++S GV+ E L G +P E N + + Y R SR
Sbjct: 179 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEAN--TYQETYKRISRVEFT 229
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
D + +GA++ L + + NP RP + V+
Sbjct: 230 FPD------FVTEGARD---LISRLLKHNPSQRPMLREVL 260
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 121/280 (43%), Gaps = 35/280 (12%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ +A+K+L +E + EV
Sbjct: 34 EDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 87
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ P G++ L +++S T I A
Sbjct: 88 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELAN 145
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H VI+RD K N+LL S K++DFG + P T + GT Y
Sbjct: 146 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYL 199
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
PE I K D++S GV+ E L G +P E N + + Y R SR
Sbjct: 200 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEAN--TYQETYKRISRVEFT 250
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
D + +GA++ L + + NP RP + V+
Sbjct: 251 FPD------FVTEGARD---LISRLLKHNPSQRPMLREVL 281
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 113/221 (51%), Gaps = 13/221 (5%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQA-VAVK-LLDIEGLQGHREWLAEVIFLG 149
F +LG G FGTV+KG + +G K + VA+K L + + ++E L E +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 76
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL 209
+ +PH+ RL+G C +L++ + MP G L +++ + ++ L + AKG+
Sbjct: 77 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGM 134
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAA 268
+L + +++RD N+L+ + K++DFG AK +G E H + + A
Sbjct: 135 NYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI-KWMA 191
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSE 308
E I T +SDV+S+GV + EL+T G + D + P SE
Sbjct: 192 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASE 231
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 113/221 (51%), Gaps = 13/221 (5%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQA-VAVK-LLDIEGLQGHREWLAEVIFLG 149
F +L G FGTV+KG + +G K + VA+K L + + ++E L E +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 79
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL 209
+ +PH+ RL+G C +L++ + MP G L +++ + ++ L + AKG+
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGM 137
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAA 268
+L + +++RD N+L+ + K++DFGLAK +G E H + + A
Sbjct: 138 NYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KWMA 194
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSE 308
E I T +SDV+S+GV + EL+T G + D + P SE
Sbjct: 195 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASE 234
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 126/298 (42%), Gaps = 27/298 (9%)
Query: 83 LSELRAIT-QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW 141
+S+L+ + +N + LG G FG V++G + Q L ++ Q ++
Sbjct: 39 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 98
Query: 142 LAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFK---RIS--VSLPWG 196
L E + + + H ++VR IG + R ++ E M G L++ L + R S SL
Sbjct: 99 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 158
Query: 197 TRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDF---TAKLSDFGLAKMGPEGSN 253
L +A A G +L EN I+RD N LL AK+ DFG+A+
Sbjct: 159 DLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGY 216
Query: 254 THVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVD 313
M + PE G T+K+D +SFGV+L E+ + KS Q +++
Sbjct: 217 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQEVLE 274
Query: 314 WAKPYLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLE 371
++ S R+ DP + + QC P+DRP A ++ +E
Sbjct: 275 ----FVTSGGRM----DP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 318
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 121/280 (43%), Gaps = 35/280 (12%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ +A+K+L +E + EV
Sbjct: 9 EDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 62
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ P G++ L +++S T I A
Sbjct: 63 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELAN 120
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H VI+RD K N+LL S K++DFG + P T + GT Y
Sbjct: 121 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYL 174
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
PE I K D++S GV+ E L G +P E N + + Y R SR
Sbjct: 175 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEAN--TYQETYKRISRVEFT 225
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
D + +GA++ L + + NP RP + V+
Sbjct: 226 FPD------FVTEGARD---LISRLLKHNPSQRPMLREVL 256
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 113/221 (51%), Gaps = 13/221 (5%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQA-VAVK-LLDIEGLQGHREWLAEVIFLG 149
F +LG G FGTV+KG + +G K + VA+K L + + ++E L E +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 74
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL 209
+ +PH+ RL+G C +L++ + MP G L +++ + ++ L + AKG+
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGM 132
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAA 268
+L + +++RD N+L+ + K++DFG AK +G E H + + A
Sbjct: 133 NYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI-KWMA 189
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSE 308
E I T +SDV+S+GV + EL+T G + D + P SE
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASE 229
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 104/233 (44%), Gaps = 17/233 (7%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH---REWLAEVIF 147
++F LLG+G F V++ + + GL+ VA+K++D + + + EV
Sbjct: 11 EDFKVGNLLGKGSFAGVYRA---ESIHTGLE---VAIKMIDKKAMYKAGMVQRVQNEVKI 64
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
QL+HP ++ L Y + LV E G + +L R+ R
Sbjct: 65 HCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR-HFMHQIIT 123
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
G+ +LH + +++RD SN+LL + K++DFGLA H T + GT Y
Sbjct: 124 GMLYLHS--HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYI 179
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQN---LVDWAKP 317
+PE + +SDV+S G + LL GR D K+ N L D+ P
Sbjct: 180 SPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMP 232
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 121/280 (43%), Gaps = 35/280 (12%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ +A+K+L +E + EV
Sbjct: 25 EDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 78
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ P G++ L +++S T I A
Sbjct: 79 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELAN 136
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H VI+RD K N+LL S K++DFG + P T + GT Y
Sbjct: 137 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYL 190
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
PE I K D++S GV+ E L G +P E N + + Y R SR
Sbjct: 191 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEAN--TYQETYKRISRVEFT 241
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
D + +GA++ L + + NP RP + V+
Sbjct: 242 FPD------FVTEGARD---LISRLLKHNPSQRPMLREVL 272
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 121/280 (43%), Gaps = 35/280 (12%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ +A+K+L +E + EV
Sbjct: 13 EDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 66
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ P G++ L +++S T I A
Sbjct: 67 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELAN 124
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H VI+RD K N+LL S K++DFG + P T + GT Y
Sbjct: 125 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYL 178
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
PE I K D++S GV+ E L G +P E N + + Y R SR
Sbjct: 179 PPEXIEGRXHDEKVDLWSLGVLCYEFLVG-------KPPFEAN--TYQETYKRISRVEFT 229
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
D + +GA++ L + + NP RP + V+
Sbjct: 230 FPD------FVTEGARD---LISRLLKHNPSQRPXLREVL 260
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 121/280 (43%), Gaps = 35/280 (12%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ +A+K+L +E + EV
Sbjct: 8 EDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ P G++ L +++S T I A
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELAN 119
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H VI+RD K N+LL S K++DFG + P T + GT Y
Sbjct: 120 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYL 173
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
PE I K D++S GV+ E L G +P E N + + Y R SR
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEAN--TYQETYKRISRVEFT 224
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
D + +GA++ L + + NP RP + V+
Sbjct: 225 FPD------FVTEGARD---LISRLLKHNPSQRPMLREVL 255
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 113/221 (51%), Gaps = 13/221 (5%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQA-VAVK-LLDIEGLQGHREWLAEVIFLG 149
F +LG G FGTV+KG + +G K + VA+K L + + ++E L E +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 74
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL 209
+ +PH+ RL+G C +L++ + MP G L +++ + ++ L + AKG+
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGM 132
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAA 268
+L + +++RD N+L+ + K++DFG AK +G E H + + A
Sbjct: 133 NYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI-KWMA 189
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSE 308
E I T +SDV+S+GV + EL+T G + D + P SE
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASE 229
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 112/221 (50%), Gaps = 13/221 (5%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQA-VAVK-LLDIEGLQGHREWLAEVIFLG 149
F +LG G FGTV+KG + +G K + VA+K L + + ++E L E +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 74
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL 209
+ +PH+ RL+G C +L+ + MP G L +++ + ++ L + AKG+
Sbjct: 75 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGM 132
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAA 268
+L + +++RD N+L+ + K++DFG AK +G E H + + A
Sbjct: 133 NYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI-KWMA 189
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSE 308
E I T +SDV+S+GV + EL+T G + D + P SE
Sbjct: 190 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASE 229
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 121/280 (43%), Gaps = 35/280 (12%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ +A+K+L +E + EV
Sbjct: 8 EDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ P G++ L +++S T I A
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELAN 119
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H VI+RD K N+LL S K++DFG + P T + GT Y
Sbjct: 120 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYL 173
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
PE I K D++S GV+ E L G +P E N + + Y R SR
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEAN--TYQETYKRISRVEFT 224
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
D + +GA++ L + + NP RP + V+
Sbjct: 225 FPD------FVTEGARD---LISRLLKHNPSQRPMLREVL 255
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 122/280 (43%), Gaps = 35/280 (12%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ +A+K+L +E + EV
Sbjct: 9 EDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 62
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ P G++ L +++S T I A
Sbjct: 63 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELAN 120
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H VI+RD K N+LL S K++DFG + P T ++ GT Y
Sbjct: 121 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS----GTLDYL 174
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
PE I K D++S GV+ E L G +P E N + + Y R SR
Sbjct: 175 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEAN--TYQETYKRISRVEFT 225
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
D + +GA++ L + + NP RP + V+
Sbjct: 226 FPD------FVTEGARD---LISRLLKHNPSQRPMLREVL 256
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 122/280 (43%), Gaps = 35/280 (12%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ + +A+K+L +E + EV
Sbjct: 5 EDFEIGRPLGKGKFGNVYLA------REKQRKFILALKVLFKAQLEKAGVEHQLRREVEI 58
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ P G++ L +++S T I A
Sbjct: 59 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELAN 116
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H VI+RD K N+LL S K++DFG + P T + GT Y
Sbjct: 117 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYL 170
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
PE I K D++S GV+ E L G +P E N + + Y R SR
Sbjct: 171 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEAN--TYQETYKRISRVEFT 221
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
D + +GA++ L + + NP RP + V+
Sbjct: 222 FPD------FVTEGARD---LISRLLKHNPSQRPMLREVL 252
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 126/298 (42%), Gaps = 27/298 (9%)
Query: 83 LSELRAIT-QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW 141
+S+L+ + +N + LG G FG V++G + Q L ++ Q ++
Sbjct: 62 ISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDF 121
Query: 142 LAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFK---RIS--VSLPWG 196
L E + + + H ++VR IG + R ++ E M G L++ L + R S SL
Sbjct: 122 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 181
Query: 197 TRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSD---FTAKLSDFGLAKMGPEGSN 253
L +A A G +L EN I+RD N LL AK+ DFG+A+
Sbjct: 182 DLLHVARDIACGCQYLE--ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGY 239
Query: 254 THVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVD 313
M + PE G T+K+D +SFGV+L E+ + KS Q +++
Sbjct: 240 YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS--LGYMPYPSKSNQEVLE 297
Query: 314 WAKPYLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLE 371
++ S R+ DP + + QC P+DRP A ++ +E
Sbjct: 298 ----FVTSGGRM----DP------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 121/280 (43%), Gaps = 35/280 (12%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ +A+K+L +E + EV
Sbjct: 8 EDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ P G++ L +++S T I A
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELAN 119
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H VI+RD K N+LL S K++DFG + P T + GT Y
Sbjct: 120 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYL 173
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
PE I K D++S GV+ E L G +P E N + + Y R SR
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEAN--TYQETYKRISRVEFT 224
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
D + +GA++ L + + NP RP + V+
Sbjct: 225 FPD------FVTEGARD---LISRLLKHNPSQRPMLREVL 255
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 112/221 (50%), Gaps = 13/221 (5%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQA-VAVK-LLDIEGLQGHREWLAEVIFLG 149
F +L G FGTV+KG + +G K + VA+K L + + ++E L E +
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 72
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL 209
+ +PH+ RL+G C +L+ + MP G L +++ + ++ L + AKG+
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGM 130
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAA 268
+L + +++RD N+L+ + K++DFGLAK +G E H + + A
Sbjct: 131 NYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KWMA 187
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSE 308
E I T +SDV+S+GV + EL+T G + D + P SE
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASE 227
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 121/280 (43%), Gaps = 35/280 (12%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ +A+K+L +E + EV
Sbjct: 11 EDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ P G++ L +++S T I A
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELAN 122
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H VI+RD K N+LL S K++DFG + P T + GT Y
Sbjct: 123 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYL 176
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
PE I K D++S GV+ E L G +P E N + + Y R SR
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEAN--TYQETYKRISRVEFT 227
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
D + +GA++ L + + NP RP + V+
Sbjct: 228 FPD------FVTEGARD---LISRLLKHNPSQRPMLREVL 258
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 121/280 (43%), Gaps = 35/280 (12%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ +A+K+L +E + EV
Sbjct: 13 EDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 66
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ P G++ L +++S T I A
Sbjct: 67 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELAN 124
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H VI+RD K N+LL S K++DFG + P T + GT Y
Sbjct: 125 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYL 178
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
PE I K D++S GV+ E L G +P E N + + Y R SR
Sbjct: 179 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEAN--TYQETYKRISRVEFT 229
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
D + +GA++ L + + NP RP + V+
Sbjct: 230 FPD------FVTEGARD---LISRLLKHNPSQRPMLREVL 260
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 102/217 (47%), Gaps = 21/217 (9%)
Query: 87 RAITQNFSSNYLLGEGGFGTVH--KGYIDDDLRQGLKAQAV----AVKLLDIEGLQGHRE 140
+A F +LG+G FG V K D RQ L A V +K+ D + R+
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQ-LYAMKVLKKATLKVRDRVRTKMERD 78
Query: 141 WLAEVIFLGQLRHPHLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRL 199
L EV HP +V+L Y + E +L L+ +F+ G L F R+S + +
Sbjct: 79 ILVEV------NHPFIVKL-HYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEED 127
Query: 200 KIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTR 259
A LA H +IYRD K NILLD + KL+DFGL+K + +
Sbjct: 128 VKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-- 185
Query: 260 VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
GT Y APE ++ T +D +SFGV++ E+LTG
Sbjct: 186 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 112/221 (50%), Gaps = 13/221 (5%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQA-VAVK-LLDIEGLQGHREWLAEVIFLG 149
F +L G FGTV+KG + +G K + VA+K L + + ++E L E +
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 79
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL 209
+ +PH+ RL+G C +L+ + MP G L +++ + ++ L + AKG+
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGM 137
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAA 268
+L + +++RD N+L+ + K++DFGLAK +G E H + + A
Sbjct: 138 NYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI-KWMA 194
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSE 308
E I T +SDV+S+GV + EL+T G + D + P SE
Sbjct: 195 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASE 234
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 121/281 (43%), Gaps = 49/281 (17%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+GEG FG +D RQ + + ++ E + RE V L ++HP++V+
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRRE----VAVLANMKHPNIVQ 87
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVS----------LPWGTRLKIAIGAAKG 208
E+ +V ++ G L FKRI+ L W ++
Sbjct: 88 YRESFEENGSLYIVMDYCEGGDL----FKRINAQKGVLFQEDQILDWFVQI--------C 135
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LA H + +++RD K+ NI L D T +L DFG+A++ S + +GT Y +
Sbjct: 136 LALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARV--LNSTVELARACIGTPYYLS 193
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYI 328
PE KSD+++ G VL EL T + + + S +NLV L+ I
Sbjct: 194 PEICENKPYNNKSDIWALGCVLYELCTLKHAFE---AGSMKNLV------------LKII 238
Query: 329 VD--PRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
P ++ YS ++ L Q NP+DRP + +++
Sbjct: 239 SGSFPPVSLHYSY----DLRSLVSQLFKRNPRDRPSVNSIL 275
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 112/221 (50%), Gaps = 13/221 (5%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQA-VAVK-LLDIEGLQGHREWLAEVIFLG 149
F +LG G FGTV+KG + +G K + VA+K L + + ++E L E +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 72
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL 209
+ +PH+ RL+G C +L+ + MP G L +++ + ++ L + AKG+
Sbjct: 73 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGM 130
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAA 268
+L + +++RD N+L+ + K++DFG AK +G E H + + A
Sbjct: 131 NYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI-KWMA 187
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSE 308
E I T +SDV+S+GV + EL+T G + D + P SE
Sbjct: 188 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASE 227
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 14/210 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFL 148
+NF +GEG +G V+K R L + VA+K LD E + E+ L
Sbjct: 6 ENFQKVEKIGEGTYGVVYKA------RNKLTGEVVALKKIRLDTETEGVPSTAIREISLL 59
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L HP++V+L+ + + LV+E + + L+ + +P +G
Sbjct: 60 KELNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
LAF H V++RD K N+L++++ KL+DFGLA+ G + T Y A
Sbjct: 119 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYRA 174
Query: 269 PE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
PE + + +T D++S G + E++T R
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 103/220 (46%), Gaps = 34/220 (15%)
Query: 102 GGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAE--VIFLGQLRHPHLVRL 159
G FG V K + +D VAVK+ LQ + W +E + ++H +L++
Sbjct: 26 GRFGCVWKAQLMNDF--------VAVKIFP---LQDKQSWQSEREIFSTPGMKHENLLQF 74
Query: 160 IGY----CCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLH-- 213
I + E L+ F +GSL ++L I + W +A ++GL++LH
Sbjct: 75 IAAEKRGSNLEVELWLITAFHDKGSLTDYLKGNI---ITWNELCHVAETMSRGLSYLHED 131
Query: 214 -------GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGY 266
G + + +RDFK+ N+LL SD TA L+DFGLA G T +GT Y
Sbjct: 132 VPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRY 191
Query: 267 AAPEYISTG-----HLTTKSDVYSFGVVLLELLTGRRSMD 301
APE + + D+Y+ G+VL EL++ ++ D
Sbjct: 192 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 121/280 (43%), Gaps = 35/280 (12%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ +A+K+L +E + EV
Sbjct: 13 EDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 66
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ P G++ L +++S T I A
Sbjct: 67 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELAN 124
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H VI+RD K N+LL S K++DFG + P T + GT Y
Sbjct: 125 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYL 178
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
PE I K D++S GV+ E L G +P E N + + Y R SR
Sbjct: 179 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEAN--TYQETYKRISRVEFT 229
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
D + +GA++ L + + NP RP + V+
Sbjct: 230 FPD------FVTEGARD---LISRLLKHNPSQRPMLREVL 260
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 18/212 (8%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE-WLAEVIFLGQLRHPHLV 157
LGE FG V+KG++ G + QAVA+K L + RE + E + +L+HP++V
Sbjct: 34 LGEDRFGKVYKGHLFGP-APGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 92
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKR--------------ISVSLPWGTRLKIAI 203
L+G +D+ +++ + G L L R + +L + +
Sbjct: 93 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 152
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGT 263
A G+ +L + + V+++D T N+L+ K+SD GL + + +
Sbjct: 153 QIAAGMEYL--SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 264 YGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE I G + SD++S+GVVL E+ +
Sbjct: 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 111/219 (50%), Gaps = 10/219 (4%)
Query: 98 LLGEGGFGTVHKG-YIDDDLRQGLKAQAVAVKLL-DIEGLQGHREWLAEVIFLGQLRHPH 155
+LG G FGTV+KG +I D + +K VA+K+L + + ++E L E + + P+
Sbjct: 24 VLGSGAFGTVYKGIWIPDG--ENVKI-PVAIKVLRENTSPKANKEILDEAYVMAGVGSPY 80
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
+ RL+G C +L V + MP G L +H+ + L L + AKG+++L
Sbjct: 81 VSRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRG-RLGSQDLLNWCMQIAKGMSYLEDV 138
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTG 275
+++RD N+L+ S K++DFGLA++ + + A E I
Sbjct: 139 R--LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRR 196
Query: 276 HLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSEQNLVD 313
T +SDV+S+GV + EL+T G + D + + +L++
Sbjct: 197 RFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLE 235
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 121/280 (43%), Gaps = 35/280 (12%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ +A+K+L +E + EV
Sbjct: 7 EDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 60
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ P G++ L +++S T I A
Sbjct: 61 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELAN 118
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H VI+RD K N+LL S K++DFG + P T + GT Y
Sbjct: 119 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYL 172
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
PE I K D++S GV+ E L G +P E N + + Y R SR
Sbjct: 173 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEAN--TYQETYKRISRVEFT 223
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
D + +GA++ L + + NP RP + V+
Sbjct: 224 FPD------FVTEGARD---LISRLLKHNPSQRPMLREVL 254
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 102/217 (47%), Gaps = 21/217 (9%)
Query: 87 RAITQNFSSNYLLGEGGFGTVH--KGYIDDDLRQGLKAQAV----AVKLLDIEGLQGHRE 140
+A F +LG+G FG V K D RQ L A V +K+ D + R+
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQ-LYAMKVLKKATLKVRDRVRTKMERD 78
Query: 141 WLAEVIFLGQLRHPHLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRL 199
L EV HP +V+L Y + E +L L+ +F+ G L F R+S + +
Sbjct: 79 ILVEV------NHPFIVKL-HYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEED 127
Query: 200 KIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTR 259
A LA H +IYRD K NILLD + KL+DFGL+K + +
Sbjct: 128 VKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-- 185
Query: 260 VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
GT Y APE ++ T +D +SFGV++ E+LTG
Sbjct: 186 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 112/221 (50%), Gaps = 13/221 (5%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQA-VAVK-LLDIEGLQGHREWLAEVIFLG 149
F +LG G FGTV+KG + +G K + VA+K L + + ++E L E +
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLW---IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMA 79
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL 209
+ +PH+ RL+G C +L+ + MP G L +++ + ++ L + AKG+
Sbjct: 80 SVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAKGM 137
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAA 268
+L + +++RD N+L+ + K++DFG AK +G E H + + A
Sbjct: 138 NYLE--DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI-KWMA 194
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLT-GRRSMDKLRPKSE 308
E I T +SDV+S+GV + EL+T G + D + P SE
Sbjct: 195 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI-PASE 234
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 102/217 (47%), Gaps = 21/217 (9%)
Query: 87 RAITQNFSSNYLLGEGGFGTVH--KGYIDDDLRQGLKAQAV----AVKLLDIEGLQGHRE 140
+A F +LG+G FG V K D RQ L A V +K+ D + R+
Sbjct: 21 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQ-LYAMKVLKKATLKVRDRVRTKMERD 79
Query: 141 WLAEVIFLGQLRHPHLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRL 199
L EV HP +V+L Y + E +L L+ +F+ G L F R+S + +
Sbjct: 80 ILVEV------NHPFIVKL-HYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEED 128
Query: 200 KIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTR 259
A LA H +IYRD K NILLD + KL+DFGL+K + +
Sbjct: 129 VKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-- 186
Query: 260 VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
GT Y APE ++ T +D +SFGV++ E+LTG
Sbjct: 187 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 121/280 (43%), Gaps = 35/280 (12%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ +A+K+L +E + EV
Sbjct: 8 EDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ P G++ L +++S T I A
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELAN 119
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H VI+RD K N+LL S K++DFG + P T + GT Y
Sbjct: 120 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLC----GTLDYL 173
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
PE I K D++S GV+ E L G +P E N + + Y R SR
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEAN--TYQETYKRISRVEFT 224
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
D + +GA++ L + + NP RP + V+
Sbjct: 225 FPD------FVTEGARD---LISRLLKHNPSQRPMLREVL 255
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 18/212 (8%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE-WLAEVIFLGQLRHPHLV 157
LGE FG V+KG++ G + QAVA+K L + RE + E + +L+HP++V
Sbjct: 17 LGEDRFGKVYKGHLFGP-APGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 75
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKR--------------ISVSLPWGTRLKIAI 203
L+G +D+ +++ + G L L R + +L + +
Sbjct: 76 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 135
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGT 263
A G+ +L + + V+++D T N+L+ K+SD GL + + +
Sbjct: 136 QIAAGMEYL--SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 264 YGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE I G + SD++S+GVVL E+ +
Sbjct: 194 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 121/280 (43%), Gaps = 35/280 (12%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ +A+K+L +E + EV
Sbjct: 11 EDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ P G++ L +++S T I A
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELAN 122
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H VI+RD K N+LL S K++DFG + P T + GT Y
Sbjct: 123 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYL 176
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
PE I K D++S GV+ E L G +P E N + + Y R SR
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEAN--TYQETYKRISRVEFT 227
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
D + +GA++ L + + NP RP + V+
Sbjct: 228 FPD------FVTEGARD---LISRLLKHNPSQRPMLREVL 258
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 121/280 (43%), Gaps = 35/280 (12%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ +A+K+L +E + EV
Sbjct: 12 EDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 65
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ P G++ L +++S T I A
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELAN 123
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H VI+RD K N+LL S K++DFG + P T + GT Y
Sbjct: 124 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYL 177
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
PE I K D++S GV+ E L G +P E N + + Y R SR
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEAN--TYQETYKRISRVEFT 228
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
D + +GA++ L + + NP RP + V+
Sbjct: 229 FPD------FVTEGARD---LISRLLKHNPSQRPMLREVL 259
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 97/207 (46%), Gaps = 13/207 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWL-AEVIFLGQL-RHPHL 156
LG G FG V + L + VAVK+L +E L +E+ + L +H ++
Sbjct: 54 LGAGAFGKVVEA-TAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSL------PWGTR--LKIAIGAAKG 208
V L+G C L++ E+ G L N L ++ L P R L + A+G
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQG 172
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
+AFL A I+RD N+LL + AK+ DFGLA+ SN V + A
Sbjct: 173 MAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 230
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLT 295
PE I T +SDV+S+G++L E+ +
Sbjct: 231 PESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 107/228 (46%), Gaps = 14/228 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+GEG G V R+ + VAVK++D+ Q EV+ + +H ++V
Sbjct: 53 IGEGSTGIVCLA------REKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVE 106
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
+ EE ++ EF+ G+L + + + V L + + LA+LH
Sbjct: 107 MYKSYLVGEELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHA--QG 161
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLT 278
VI+RD K+ +ILL D KLSDFG + ++GT + APE IS
Sbjct: 162 VIHRDIKSDSILLTLDGRVKLSDFGFC--AQISKDVPKRKXLVGTPYWMAPEVISRSLYA 219
Query: 279 TKSDVYSFGVVLLELLTGRRSMDKLRP-KSEQNLVDWAKPYLRSSRRL 325
T+ D++S G++++E++ G P ++ + L D P L++S ++
Sbjct: 220 TEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKV 267
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 95/215 (44%), Gaps = 16/215 (7%)
Query: 87 RAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE---WLA 143
R F LLG+G FG V +++ + A+K+L E + E L
Sbjct: 144 RVTMNEFEYLKLLGKGTFGKVIL------VKEKATGRYYAMKILKKEVIVAKDEVAHTLT 197
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
E L RHP L L Y + +RL V E+ G L HL + S
Sbjct: 198 ENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 256
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +A L +LH +N V+YRD K N++LD D K++DFGL K G + T T G
Sbjct: 257 IVSA--LDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCG 311
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGR 297
T Y APE + D + GVV+ E++ GR
Sbjct: 312 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 99/228 (43%), Gaps = 26/228 (11%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWL-AEVIFLG 149
+N +LG G FG V + G+ Q VAVK+L + RE L +E+ +
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQ-VAVKMLKEKADSSEREALMSELKMMT 103
Query: 150 QL-RHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHL------FKRISVSLPWGTRLK-- 200
QL H ++V L+G C L++E+ G L N+L F + RL+
Sbjct: 104 QLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 163
Query: 201 -------------IAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKM 247
A AKG+ FL ++RD N+L+ K+ DFGLA+
Sbjct: 164 EDLNVLTFEDLLCFAYQVAKGMEFLEF--KSCVHRDLAARNVLVTHGKVVKICDFGLARD 221
Query: 248 GPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
SN V + APE + G T KSDV+S+G++L E+ +
Sbjct: 222 IMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 95/215 (44%), Gaps = 16/215 (7%)
Query: 87 RAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE---WLA 143
R F LLG+G FG V +++ + A+K+L E + E L
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKVIL------VKEKATGRYYAMKILKKEVIVAKDEVAHTLT 200
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
E L RHP L L Y + +RL V E+ G L HL + S
Sbjct: 201 ENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 259
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +A L +LH +N V+YRD K N++LD D K++DFGL K G + T T G
Sbjct: 260 IVSA--LDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCG 314
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGR 297
T Y APE + D + GVV+ E++ GR
Sbjct: 315 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 97/207 (46%), Gaps = 13/207 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWL-AEVIFLGQL-RHPHL 156
LG G FG V + L + VAVK+L +E L +E+ + L +H ++
Sbjct: 46 LGAGAFGKVVEA-TAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI 104
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSL------PWGTR--LKIAIGAAKG 208
V L+G C L++ E+ G L N L ++ L P R L + A+G
Sbjct: 105 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQG 164
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
+AFL A I+RD N+LL + AK+ DFGLA+ SN V + A
Sbjct: 165 MAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 222
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLT 295
PE I T +SDV+S+G++L E+ +
Sbjct: 223 PESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 119/284 (41%), Gaps = 42/284 (14%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL------DIEGLQGHREWLAEVIFLGQLR 152
+G G FG V G + D VAVK D++ ++L E L Q
Sbjct: 122 IGRGNFGEVFSGRLRAD------NTLVAVKSCRETLPPDLKA-----KFLQEARILKQYS 170
Query: 153 HPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFL 212
HP++VRLIG C + + +V E + G L + L T L++ AA G+ +L
Sbjct: 171 HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYL 229
Query: 213 HGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYI 272
I+RD N L+ K+SDFG+++ +G + APE +
Sbjct: 230 ES--KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEAL 287
Query: 273 STGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLR-SSRRLRYIVDP 331
+ G +++SDV+SFG++L E + A PY S+++ R V+
Sbjct: 288 NYGRYSSESDVWSFGILLWETFSLG-----------------ASPYPNLSNQQTREFVEK 330
Query: 332 RLAGQYSVKGAKEMAVLAL--QCISVNPKDRPKMAAVVATLESL 373
G+ AV L QC + P RP + + L+S+
Sbjct: 331 --GGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 120/280 (42%), Gaps = 35/280 (12%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ +A+K+L +E + EV
Sbjct: 34 EDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 87
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ P G++ L +++S T I A
Sbjct: 88 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELAN 145
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H VI+RD K N+LL S K++DFG + P + GT Y
Sbjct: 146 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDYL 199
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
PE I K D++S GV+ E L G +P E N + + Y R SR
Sbjct: 200 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEAN--TYQETYKRISRVEFT 250
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
D + +GA++ L + + NP RP + V+
Sbjct: 251 FPD------FVTEGARD---LISRLLKHNPSQRPMLREVL 281
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 104/231 (45%), Gaps = 11/231 (4%)
Query: 85 ELRAITQNFSSNY-LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLA 143
E + +T+N Y +LG+GGFG V + G ++ I+ +G L
Sbjct: 177 ERQPVTKNTFRQYRVLGKGGFGEVCACQVR---ATGKMYACKKLEKKRIKKRKGEAMALN 233
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
E L ++ +V L Y E ++ L LV M G L+ H++ P + A
Sbjct: 234 EKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA 292
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
GL LH ++YRD K NILLD ++SD GLA PEG + RV G
Sbjct: 293 AEICCGLEDLH--RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRV-G 347
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVD 313
T GY APE + T D ++ G +L E++ G+ + + K ++ V+
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE 398
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 119/284 (41%), Gaps = 42/284 (14%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL------DIEGLQGHREWLAEVIFLGQLR 152
+G G FG V G + D VAVK D++ ++L E L Q
Sbjct: 122 IGRGNFGEVFSGRLRAD------NTLVAVKSCRETLPPDLKA-----KFLQEARILKQYS 170
Query: 153 HPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFL 212
HP++VRLIG C + + +V E + G L + L T L++ AA G+ +L
Sbjct: 171 HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYL 229
Query: 213 HGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYI 272
I+RD N L+ K+SDFG+++ +G + APE +
Sbjct: 230 ES--KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEAL 287
Query: 273 STGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLR-SSRRLRYIVDP 331
+ G +++SDV+SFG++L E + A PY S+++ R V+
Sbjct: 288 NYGRYSSESDVWSFGILLWETFSLG-----------------ASPYPNLSNQQTREFVEK 330
Query: 332 RLAGQYSVKGAKEMAVLAL--QCISVNPKDRPKMAAVVATLESL 373
G+ AV L QC + P RP + + L+S+
Sbjct: 331 --GGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 104/231 (45%), Gaps = 11/231 (4%)
Query: 85 ELRAITQNFSSNY-LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLA 143
E + +T+N Y +LG+GGFG V + G ++ I+ +G L
Sbjct: 177 ERQPVTKNTFRQYRVLGKGGFGEVCACQVR---ATGKMYACKKLEKKRIKKRKGEAMALN 233
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
E L ++ +V L Y E ++ L LV M G L+ H++ P + A
Sbjct: 234 EKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA 292
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
GL LH ++YRD K NILLD ++SD GLA PEG + RV G
Sbjct: 293 AEICCGLEDLH--RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRV-G 347
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVD 313
T GY APE + T D ++ G +L E++ G+ + + K ++ V+
Sbjct: 348 TVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE 398
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 16/201 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQLRHPHLV 157
LG G G V K ++ +A KL+ +E R + + E+ L + P++V
Sbjct: 24 LGAGNGGVVTK------VQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 77
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
G D E + E M GSL+ L + + +P K++I +GLA+L ++
Sbjct: 78 GFYGAFYSDGEISICMEHMDGGSLDQVL--KEAKRIPEEILGKVSIAVLRGLAYLR-EKH 134
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLA-KMGPEGSNTHVTTRVMGTYGYAAPEYISTGH 276
+++RD K SNIL++S KL DFG++ ++ +N+ V GT Y APE + H
Sbjct: 135 QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV-----GTRSYMAPERLQGTH 189
Query: 277 LTTKSDVYSFGVVLLELLTGR 297
+ +SD++S G+ L+EL GR
Sbjct: 190 YSVQSDIWSMGLSLVELAVGR 210
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQ 150
+F LG G G V K + +A KL+ +E R + + E+ L +
Sbjct: 69 DFEKISELGAGNGGVVFK------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 122
Query: 151 LRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLA 210
P++V G D E + E M GSL+ L K + +P K++I KGL
Sbjct: 123 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLT 180
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLA-KMGPEGSNTHVTTRVMGTYGYAAP 269
+L ++ +++RD K SNIL++S KL DFG++ ++ +N+ V TR Y +P
Sbjct: 181 YLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-----SYMSP 234
Query: 270 EYISTGHLTTKSDVYSFGVVLLELLTGR 297
E + H + +SD++S G+ L+E+ GR
Sbjct: 235 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 121/280 (43%), Gaps = 35/280 (12%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ +A+K+L +E + EV
Sbjct: 10 EDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 63
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ P G++ L +++S T I A
Sbjct: 64 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELAN 121
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H VI+RD K N+LL S K+++FG + P T + GT Y
Sbjct: 122 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLDYL 175
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
PE I K D++S GV+ E L G +P E N + + Y R SR
Sbjct: 176 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEAN--TYQETYKRISRVEFT 226
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
D + +GA++ L + + NP RP + V+
Sbjct: 227 FPD------FVTEGARD---LISRLLKHNPSQRPMLREVL 257
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 120/280 (42%), Gaps = 35/280 (12%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ +A+K+L +E + EV
Sbjct: 10 EDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 63
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ P G++ L +++S T I A
Sbjct: 64 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELAN 121
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H VI+RD K N+LL S K++DFG + P + GT Y
Sbjct: 122 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYL 175
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
PE I K D++S GV+ E L G +P E N + + Y R SR
Sbjct: 176 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEAN--TYQETYKRISRVEFT 226
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
D + +GA++ L + + NP RP + V+
Sbjct: 227 FPD------FVTEGARD---LISRLLKHNPSQRPMLREVL 257
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 120/280 (42%), Gaps = 35/280 (12%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ +A+K+L +E + EV
Sbjct: 9 EDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 62
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ P G++ L +++S T I A
Sbjct: 63 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELAN 120
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H VI+RD K N+LL S K++DFG + P + GT Y
Sbjct: 121 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DTLCGTLDYL 174
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
PE I K D++S GV+ E L G +P E N + + Y R SR
Sbjct: 175 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEAN--TYQETYKRISRVEFT 225
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
D + +GA++ L + + NP RP + V+
Sbjct: 226 FPD------FVTEGARD---LISRLLKHNPSQRPMLREVL 256
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 120/280 (42%), Gaps = 35/280 (12%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ +A+K+L +E + EV
Sbjct: 11 EDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ P G++ L +++S T I A
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELAN 122
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H VI+RD K N+LL S K++DFG + P + GT Y
Sbjct: 123 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYL 176
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
PE I K D++S GV+ E L G +P E N + + Y R SR
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEAN--TYQETYKRISRVEFT 227
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
D + +GA++ L + + NP RP + V+
Sbjct: 228 FPD------FVTEGARD---LISRLLKHNPSQRPMLREVL 258
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQ 150
+F LG G G V K + +A KL+ +E R + + E+ L +
Sbjct: 34 DFEKISELGAGNGGVVFK------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 87
Query: 151 LRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLA 210
P++V G D E + E M GSL+ L K + +P K++I KGL
Sbjct: 88 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLT 145
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLA-KMGPEGSNTHVTTRVMGTYGYAAP 269
+L ++ +++RD K SNIL++S KL DFG++ ++ +N+ V TR Y +P
Sbjct: 146 YLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-----SYMSP 199
Query: 270 EYISTGHLTTKSDVYSFGVVLLELLTGR 297
E + H + +SD++S G+ L+E+ GR
Sbjct: 200 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH--REWLAEVIFLGQLRHPH 155
+LG+G FG V K + + Q AVK+++ + L EV L +L HP+
Sbjct: 29 MLGKGSFGEVLK------CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
+++L + +V E G L + + KR S R I G+ ++H
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--IIKQVFSGITYMH-- 138
Query: 216 ENPVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYI 272
++ +++RD K NILL+S D K+ DFGL+ + NT + R+ GT Y APE +
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ--NTKMKDRI-GTAYYIAPEVL 195
Query: 273 STGHLTTKSDVYSFGVVLLELLTG 296
G K DV+S GV+L LL+G
Sbjct: 196 R-GTYDEKCDVWSAGVILYILLSG 218
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 121/280 (43%), Gaps = 35/280 (12%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ +A+K+L +E + EV
Sbjct: 11 EDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ P G++ L +++S T I A
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELAN 122
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H VI+RD K N+LL S K+++FG + P T + GT Y
Sbjct: 123 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLDYL 176
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
PE I K D++S GV+ E L G +P E N + + Y R SR
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEAN--TYQETYKRISRVEFT 227
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
D + +GA++ L + + NP RP + V+
Sbjct: 228 FPD------FVTEGARD---LISRLLKHNPSQRPMLREVL 258
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 127/289 (43%), Gaps = 31/289 (10%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQ-GHREWLAEVIFLGQ 150
++ ++G G V Y K + VA+K +++E Q E L E+ + Q
Sbjct: 16 DYELQEVIGSGATAVVQAAYC------APKKEKVAIKRINLEKCQTSMDELLKEIQAMSQ 69
Query: 151 LRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRI-------SVSLPWGTRLKIAI 203
HP++V +E LV + + GS+ + + K I S L T I
Sbjct: 70 CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD-IIKHIVAKGEHKSGVLDESTIATILR 128
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKM---GPEGSNTHVTTRV 260
+GL +LH +N I+RD K NILL D + +++DFG++ G + + V
Sbjct: 129 EVLEGLEYLH--KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 186
Query: 261 MGTYGYAAPEYISTGH-LTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNL-VDWAKPY 318
+GT + APE + K+D++SFG+ +EL TG K P L + P
Sbjct: 187 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPS 246
Query: 319 LRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
L + + D + +Y K ++M L C+ +P+ RP A ++
Sbjct: 247 LETG-----VQDKEMLKKYG-KSFRKMISL---CLQKDPEKRPTAAELL 286
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 120/280 (42%), Gaps = 35/280 (12%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ +A+K+L +E + EV
Sbjct: 8 EDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ P G++ L +++S T I A
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELAN 119
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H VI+RD K N+LL S K++DFG + P + GT Y
Sbjct: 120 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYL 173
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
PE I K D++S GV+ E L G +P E N + + Y R SR
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEAN--TYQETYKRISRVEFT 224
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
D + +GA++ L + + NP RP + V+
Sbjct: 225 FPD------FVTEGARD---LISRLLKHNPSQRPMLREVL 255
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 120/280 (42%), Gaps = 35/280 (12%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ +A+K+L +E + EV
Sbjct: 11 EDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ P G++ L +++S T I A
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELAN 122
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H VI+RD K N+LL S K++DFG + P + GT Y
Sbjct: 123 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDYL 176
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
PE I K D++S GV+ E L G +P E N + + Y R SR
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEAN--TYQETYKRISRVEFT 227
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
D + +GA++ L + + NP RP + V+
Sbjct: 228 FPD------FVTEGARD---LISRLLKHNPSQRPMLREVL 258
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 120/280 (42%), Gaps = 35/280 (12%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ +A+K+L +E + EV
Sbjct: 11 EDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 64
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ P G++ L +++S T I A
Sbjct: 65 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELAN 122
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H VI+RD K N+LL S K++DFG + P + GT Y
Sbjct: 123 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYL 176
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
PE I K D++S GV+ E L G +P E N + + Y R SR
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEAN--TYQETYKRISRVEFT 227
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
D + +GA++ L + + NP RP + V+
Sbjct: 228 FPD------FVTEGARD---LISRLLKHNPSQRPMLREVL 258
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 99 LGEGGFG-TVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH-REWLAEVIFLGQL-RHPH 155
LGEG FG V I D + + VAVK+L + + + ++E+ + + +H +
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTR--------------LKI 201
++ L+G C +D ++ E+ +G+L +L R L + +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 202 AIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVM 261
A A+G+ +L A I+RD N+L+ D K++DFGLA+ TT
Sbjct: 149 AYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 206
Query: 262 GTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE + T +SDV+SFGV+L E+ T
Sbjct: 207 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 120/280 (42%), Gaps = 35/280 (12%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ +A+K+L +E + EV
Sbjct: 8 EDFEIGRPLGKGKFGNVYLA------REKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ P G++ L +++S T I A
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELAN 119
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H VI+RD K N+LL S K++DFG + P + GT Y
Sbjct: 120 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYL 173
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
PE I K D++S GV+ E L G +P E N + + Y R SR
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEAN--TYQETYKRISRVEFT 224
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
D + +GA++ L + + NP RP + V+
Sbjct: 225 FPD------FVTEGARD---LISRLLKHNPSQRPMLREVL 255
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQ 150
+F LG G G V K + +A KL+ +E R + + E+ L +
Sbjct: 7 DFEKISELGAGNGGVVFK------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 151 LRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLA 210
P++V G D E + E M GSL+ L K + +P K++I KGL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLT 118
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLA-KMGPEGSNTHVTTRVMGTYGYAAP 269
+L ++ +++RD K SNIL++S KL DFG++ ++ +N+ V TR Y +P
Sbjct: 119 YLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-----SYMSP 172
Query: 270 EYISTGHLTTKSDVYSFGVVLLELLTGR 297
E + H + +SD++S G+ L+E+ GR
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 99 LGEGGFG-TVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH-REWLAEVIFLGQL-RHPH 155
LGEG FG V I D + + VAVK+L + + + ++E+ + + +H +
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTR--------------LKI 201
++ L+G C +D ++ E+ +G+L +L R L + +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 202 AIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVM 261
A A+G+ +L A I+RD N+L+ D K++DFGLA+ TT
Sbjct: 148 AYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 205
Query: 262 GTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE + T +SDV+SFGV+L E+ T
Sbjct: 206 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 127/289 (43%), Gaps = 31/289 (10%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQ-GHREWLAEVIFLGQ 150
++ ++G G V Y K + VA+K +++E Q E L E+ + Q
Sbjct: 11 DYELQEVIGSGATAVVQAAYC------APKKEKVAIKRINLEKCQTSMDELLKEIQAMSQ 64
Query: 151 LRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRI-------SVSLPWGTRLKIAI 203
HP++V +E LV + + GS+ + + K I S L T I
Sbjct: 65 CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD-IIKHIVAKGEHKSGVLDESTIATILR 123
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKM---GPEGSNTHVTTRV 260
+GL +LH +N I+RD K NILL D + +++DFG++ G + + V
Sbjct: 124 EVLEGLEYLH--KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTF 181
Query: 261 MGTYGYAAPEYISTGH-LTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNL-VDWAKPY 318
+GT + APE + K+D++SFG+ +EL TG K P L + P
Sbjct: 182 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPS 241
Query: 319 LRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
L + + D + +Y K ++M L C+ +P+ RP A ++
Sbjct: 242 LETG-----VQDKEMLKKYG-KSFRKMISL---CLQKDPEKRPTAAELL 281
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 38/226 (16%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQLRHPHLV 157
+GEG FG V + L VAVK+L E + ++ E + + +P++V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYE-PFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIV 113
Query: 158 RLIGYCCEDEERLLVYEFMPRGSL----------------ENHLFKRISVSLP------W 195
+L+G C + L++E+M G L + L R VS P
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173
Query: 196 GTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGL------AKMGP 249
+L IA A G+A+L +E ++RD T N L+ + K++DFGL A
Sbjct: 174 AEQLCIARQVAAGMAYL--SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 250 EGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
N + R M PE I TT+SDV+++GVVL E+ +
Sbjct: 232 ADGNDAIPIRWM------PPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 99 LGEGGFG-TVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH-REWLAEVIFLGQL-RHPH 155
LGEG FG V I D + + VAVK+L + + + ++E+ + + +H +
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTR--------------LKI 201
++ L+G C +D ++ E+ +G+L +L R L + +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 202 AIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVM 261
A A+G+ +L A I+RD N+L+ D K++DFGLA+ TT
Sbjct: 145 AYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 202
Query: 262 GTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE + T +SDV+SFGV+L E+ T
Sbjct: 203 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 99 LGEGGFG-TVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH-REWLAEVIFLGQL-RHPH 155
LGEG FG V I D + + VAVK+L + + + ++E+ + + +H +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTR--------------LKI 201
++ L+G C +D ++ E+ +G+L +L R L + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 202 AIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVM 261
A A+G+ +L A I+RD N+L+ D K++DFGLA+ TT
Sbjct: 156 AYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGR 213
Query: 262 GTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE + T +SDV+SFGV+L E+ T
Sbjct: 214 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 120/280 (42%), Gaps = 35/280 (12%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ +A+K+L +E + EV
Sbjct: 8 EDFEIGRPLGKGKFGNVYLA------REKNSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ P G++ L +++S T I A
Sbjct: 62 QSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL-QKLSKFDEQRTATYIT-ELAN 119
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H + VI+RD K N+LL S K++DFG + P + GT Y
Sbjct: 120 ALSYCHSKK--VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYL 173
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
PE I K D++S GV+ E L G +P E N + Y R SR
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG-------KPPFEAN--TYQDTYKRISRVEFT 224
Query: 328 IVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
D + +GA++ L + + NP RP + V+
Sbjct: 225 FPD------FVTEGARD---LISRLLKHNPSQRPMLREVL 255
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 99 LGEGGFG-TVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH-REWLAEVIFLGQL-RHPH 155
LGEG FG V I D + + VAVK+L + + + ++E+ + + +H +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTR--------------LKI 201
++ L+G C +D ++ E+ +G+L +L R L + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 202 AIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVM 261
A A+G+ +L A I+RD N+L+ D K++DFGLA+ TT
Sbjct: 156 AYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 213
Query: 262 GTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE + T +SDV+SFGV+L E+ T
Sbjct: 214 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQ 150
+F LG G G V K + +A KL+ +E R + + E+ L +
Sbjct: 7 DFEKISELGAGNGGVVFK------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 151 LRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLA 210
P++V G D E + E M GSL+ L K + +P K++I KGL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLT 118
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLA-KMGPEGSNTHVTTRVMGTYGYAAP 269
+L ++ +++RD K SNIL++S KL DFG++ ++ +N+ V TR Y +P
Sbjct: 119 YLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-----SYMSP 172
Query: 270 EYISTGHLTTKSDVYSFGVVLLELLTGR 297
E + H + +SD++S G+ L+E+ GR
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQ 150
+F LG G G V K + +A KL+ +E R + + E+ L +
Sbjct: 7 DFEKISELGAGNGGVVFK------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 151 LRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLA 210
P++V G D E + E M GSL+ L K + +P K++I KGL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLT 118
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLA-KMGPEGSNTHVTTRVMGTYGYAAP 269
+L ++ +++RD K SNIL++S KL DFG++ ++ +N+ V TR Y +P
Sbjct: 119 YLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-----SYMSP 172
Query: 270 EYISTGHLTTKSDVYSFGVVLLELLTGR 297
E + H + +SD++S G+ L+E+ GR
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 102/208 (49%), Gaps = 16/208 (7%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQ 150
+F LG G G V K + +A KL+ +E R + + E+ L +
Sbjct: 7 DFEKISELGAGNGGVVFK------VSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 151 LRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLA 210
P++V G D E + E M GSL+ L K + +P K++I KGL
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLT 118
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLA-KMGPEGSNTHVTTRVMGTYGYAAP 269
+L ++ +++RD K SNIL++S KL DFG++ ++ +N+ V TR Y +P
Sbjct: 119 YLR-EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTR-----SYMSP 172
Query: 270 EYISTGHLTTKSDVYSFGVVLLELLTGR 297
E + H + +SD++S G+ L+E+ GR
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 99 LGEGGFG-TVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH-REWLAEVIFLGQL-RHPH 155
LGEG FG V I D + + VAVK+L + + + ++E+ + + +H +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTR--------------LKI 201
++ L+G C +D ++ E+ +G+L +L R L + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 202 AIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVM 261
A A+G+ +L A I+RD N+L+ D K++DFGLA+ TT
Sbjct: 156 AYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 213
Query: 262 GTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE + T +SDV+SFGV+L E+ T
Sbjct: 214 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 21/206 (10%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE--WLAEVIFLGQLRHPH 155
LG+GGF ++ D D ++ + V +L L+ H++ E+ L +PH
Sbjct: 49 FLGKGGFAKCYE-ITDMDTKEVFAGKVVPKSML----LKPHQKEKMSTEIAIHKSLDNPH 103
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLP---WGTRLKIAIGAAKGLAFL 212
+V G+ +D+ +V E R SL +R +V+ P + R I +G+ +L
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYL 158
Query: 213 HGAENPVIYRDFKTSNILLDSDFTAKLSDFGLA-KMGPEGSNTHVTTRVMGTYGYAAPEY 271
H N VI+RD K N+ L+ D K+ DFGLA K+ +G + GT Y APE
Sbjct: 159 HN--NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT---LCGTPNYIAPEV 213
Query: 272 ISTGHLTTKSDVYSFGVVLLELLTGR 297
+ + + D++S G +L LL G+
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 94/215 (43%), Gaps = 16/215 (7%)
Query: 87 RAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE---WLA 143
R F LLG+G FG V +++ + A+K+L E + E L
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVIL------VKEKATGRYYAMKILKKEVIVAKDEVAHTLT 59
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
E L RHP L L Y + +RL V E+ G L HL + S
Sbjct: 60 ENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 118
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +A L +LH +N V+YRD K N++LD D K++DFGL K G + T G
Sbjct: 119 IVSA--LDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCG 173
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGR 297
T Y APE + D + GVV+ E++ GR
Sbjct: 174 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 15/210 (7%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW---LAEVIF 147
++F +LGEG F TV R+ ++ A+K+L+ + + E
Sbjct: 37 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 90
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLV-YEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAA 206
+ +L HP V+L +C +D+E+L + G L ++ ++I TR A
Sbjct: 91 MSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIV 147
Query: 207 KGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGY 266
L +LHG +I+RD K NILL+ D +++DFG AK+ S +GT Y
Sbjct: 148 SALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 205
Query: 267 AAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+PE ++ SD+++ G ++ +L+ G
Sbjct: 206 VSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 94/215 (43%), Gaps = 16/215 (7%)
Query: 87 RAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE---WLA 143
R F LLG+G FG V +++ + A+K+L E + E L
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVIL------VKEKATGRYYAMKILKKEVIVAKDEVAHTLT 57
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
E L RHP L L Y + +RL V E+ G L HL + S
Sbjct: 58 ENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 116
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +A L +LH +N V+YRD K N++LD D K++DFGL K G + T G
Sbjct: 117 IVSA--LDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCG 171
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGR 297
T Y APE + D + GVV+ E++ GR
Sbjct: 172 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 93/176 (52%), Gaps = 10/176 (5%)
Query: 124 AVAVKLLDIEGLQGHR-EWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLE 182
+A KL+ +E R + + E+ L + P++V G D E + E M GSL+
Sbjct: 52 VMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD 111
Query: 183 NHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDF 242
L K + +P K++I KGL +L ++ +++RD K SNIL++S KL DF
Sbjct: 112 QVLKK--AGRIPEQILGKVSIAVIKGLTYLR-EKHKIMHRDVKPSNILVNSRGEIKLCDF 168
Query: 243 GLA-KMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGR 297
G++ ++ +N+ V TR Y +PE + H + +SD++S G+ L+E+ GR
Sbjct: 169 GVSGQLIDSMANSFVGTR-----SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 94/215 (43%), Gaps = 16/215 (7%)
Query: 87 RAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE---WLA 143
R F LLG+G FG V +++ + A+K+L E + E L
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVIL------VKEKATGRYYAMKILKKEVIVAKDEVAHTLT 58
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
E L RHP L L Y + +RL V E+ G L HL + S
Sbjct: 59 ENRVLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAE 117
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +A L +LH +N V+YRD K N++LD D K++DFGL K G + T G
Sbjct: 118 IVSA--LDYLHSEKN-VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCG 172
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGR 297
T Y APE + D + GVV+ E++ GR
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 99 LGEGGFG-TVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH-REWLAEVIFLGQL-RHPH 155
LGEG FG V I D + + VAVK+L + + + ++E+ + + +H +
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTR--------------LKI 201
++ L+G C +D ++ E+ +G+L +L R L + +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 202 AIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVM 261
A A+G+ +L A I+RD N+L+ D K++DFGLA+ TT
Sbjct: 141 AYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 198
Query: 262 GTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE + T +SDV+SFGV+L E+ T
Sbjct: 199 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 128/297 (43%), Gaps = 42/297 (14%)
Query: 75 GPDLYDFQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEG 134
GP YD + + + + +G GGF V L + VA+K++D
Sbjct: 1 GPKDYD-------ELLKYYELHETIGTGGFAKVKLAC------HILTGEMVAIKIMDKNT 47
Query: 135 LQGHREWL-AEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSL 193
L + E+ L LRH H+ +L + +V E+ P G L +++ + +S
Sbjct: 48 LGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSE 107
Query: 194 PWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSN 253
TR+ + +A++H +RD K N+L D KL DFGL P+G+
Sbjct: 108 E-ETRV-VFRQIVSAVAYVHS--QGYAHRDLKPENLLFDEYHKLKLIDFGLCA-KPKGNK 162
Query: 254 THVTTRVMGTYGYAAPEYIS-TGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLV 312
+ G+ YAAPE I +L +++DV+S G++L L+ G P + N++
Sbjct: 163 DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCG------FLPFDDDNVM 216
Query: 313 DWAKPYLRSSRRLRYIVDPRLAGQYSV-KGAKEMAVLAL-QCISVNPKDRPKMAAVV 367
K +R G+Y V K ++L L Q + V+PK R M ++
Sbjct: 217 ALYKKIMR--------------GKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLL 259
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 21/206 (10%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE--WLAEVIFLGQLRHPH 155
LG+GGF ++ D D ++ + V +L L+ H++ E+ L +PH
Sbjct: 49 FLGKGGFAKCYE-ITDMDTKEVFAGKVVPKSML----LKPHQKEKMSTEIAIHKSLDNPH 103
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLP---WGTRLKIAIGAAKGLAFL 212
+V G+ +D+ +V E R SL +R +V+ P + R I +G+ +L
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYL 158
Query: 213 HGAENPVIYRDFKTSNILLDSDFTAKLSDFGLA-KMGPEGSNTHVTTRVMGTYGYAAPEY 271
H N VI+RD K N+ L+ D K+ DFGLA K+ +G + GT Y APE
Sbjct: 159 HN--NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKXLCGTPNYIAPEV 213
Query: 272 ISTGHLTTKSDVYSFGVVLLELLTGR 297
+ + + D++S G +L LL G+
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH--REWLAEVIFLGQLRHPH 155
+LG+G FG V K + + Q AVK+++ + L EV L +L HP+
Sbjct: 29 MLGKGSFGEVLK------CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
+++L + +V E G L + + KR S R I G+ ++H
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAAR--IIKQVFSGITYMH-- 138
Query: 216 ENPVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYI 272
++ +++RD K NILL+S D K+ DFGL+ + NT + R+ GT Y APE +
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ--NTKMKDRI-GTAYYIAPEVL 195
Query: 273 STGHLTTKSDVYSFGVVLLELLTG 296
G K DV+S GV+L LL+G
Sbjct: 196 R-GTYDEKCDVWSAGVILYILLSG 218
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 23/215 (10%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIE-GLQGH-----REWLAE 144
Q + +GEG +G V K DL+ G + VA+K + ++ G +G RE +A
Sbjct: 11 QQYECVAEIGEGAYGKVFKAR---DLKNG--GRFVALKRVRVQTGEEGMPLSTIRE-VAV 64
Query: 145 VIFLGQLRHPHLVRLIGYCC----EDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRL 199
+ L HP++VRL C + E +L LV+E + + L +L K +P T
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIK 123
Query: 200 KIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTR 259
+ +GL FLH + V++RD K NIL+ S KL+DFGLA++ S T
Sbjct: 124 DMMFQLLRGLDFLHS--HRVVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTS 178
Query: 260 VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELL 294
V+ T Y APE + T D++S G + E+
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 97/211 (45%), Gaps = 17/211 (8%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWL-AEVIFLGQL-RHPHL 156
LG G FG V + L + VAVK+L +E L +E+ + L +H ++
Sbjct: 54 LGAGAFGKVVEA-TAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISV------------SLPWGTRLKIAIG 204
V L+G C L++ E+ G L N L ++ V +L L +
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQ 172
Query: 205 AAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY 264
A+G+AFL A I+RD N+LL + AK+ DFGLA+ SN V
Sbjct: 173 VAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 265 GYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE I T +SDV+S+G++L E+ +
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 21/206 (10%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE--WLAEVIFLGQLRHPH 155
LG+GGF ++ D D ++ + V +L L+ H++ E+ L +PH
Sbjct: 49 FLGKGGFAKCYE-ITDMDTKEVFAGKVVPKSML----LKPHQKEKMSTEIAIHKSLDNPH 103
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLP---WGTRLKIAIGAAKGLAFL 212
+V G+ +D+ +V E R SL +R +V+ P + R I +G+ +L
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYL 158
Query: 213 HGAENPVIYRDFKTSNILLDSDFTAKLSDFGLA-KMGPEGSNTHVTTRVMGTYGYAAPEY 271
H N VI+RD K N+ L+ D K+ DFGLA K+ +G + GT Y APE
Sbjct: 159 HN--NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPNYIAPEV 213
Query: 272 ISTGHLTTKSDVYSFGVVLLELLTGR 297
+ + + D++S G +L LL G+
Sbjct: 214 LCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH--REWLAEVIFLGQLRHPH 155
+LG+G FG V K + + Q AVK+++ + L EV L +L HP+
Sbjct: 29 MLGKGSFGEVLK------CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
+++L + +V E G L + + KR S R+ + + G+ ++H
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS--GITYMH-- 138
Query: 216 ENPVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYI 272
++ +++RD K NILL+S D K+ DFGL+ + NT + R+ GT Y APE +
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ--NTKMKDRI-GTAYYIAPEVL 195
Query: 273 STGHLTTKSDVYSFGVVLLELLTG 296
G K DV+S GV+L LL+G
Sbjct: 196 R-GTYDEKCDVWSAGVILYILLSG 218
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 120/257 (46%), Gaps = 41/257 (15%)
Query: 91 QNFSSNYL-LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLG 149
+ + +N++ +GEG G V I + G + VAVK +D+ Q EV+ +
Sbjct: 44 REYLANFIKIGEGSTGIV---CIATEKHTG---KQVAVKKMDLRKQQRRELLFNEVVIMR 97
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLK------IAI 203
H ++V + +E +V EF+ G+L + + TR+ + +
Sbjct: 98 DYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTD---------IVTHTRMNEEQIATVCL 148
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGL-AKMGPEGSNTHVTTRVMG 262
+ L++LH VI+RD K+ +ILL SD KLSDFG A++ E ++G
Sbjct: 149 SVLRALSYLHN--QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK---RKXLVG 203
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSS 322
T + APE IS T+ D++S G++++E++ G + +P L++
Sbjct: 204 TPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPY-------------FNEPPLQAM 250
Query: 323 RRLRYIVDPRLAGQYSV 339
RR+R + PR+ + V
Sbjct: 251 RRIRDSLPPRVKDLHKV 267
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 23/215 (10%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIE-GLQGH-----REWLAE 144
Q + +GEG +G V K DL+ G + VA+K + ++ G +G RE +A
Sbjct: 11 QQYECVAEIGEGAYGKVFKAR---DLKNG--GRFVALKRVRVQTGEEGMPLSTIRE-VAV 64
Query: 145 VIFLGQLRHPHLVRLIGYCC----EDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRL 199
+ L HP++VRL C + E +L LV+E + + L +L K +P T
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIK 123
Query: 200 KIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTR 259
+ +GL FLH + V++RD K NIL+ S KL+DFGLA++ S T
Sbjct: 124 DMMFQLLRGLDFLHS--HRVVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTS 178
Query: 260 VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELL 294
V+ T Y APE + T D++S G + E+
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 99 LGEGGFG-TVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH-REWLAEVIFLGQL-RHPH 155
LGEG FG V I D + + VAVK+L + + + ++E+ + + +H +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTR--------------LKI 201
++ L+G C +D ++ E+ +G+L +L R L + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 202 AIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVM 261
A A+G+ +L A I+RD N+L+ D K++DFGLA+ TT
Sbjct: 156 AYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 213
Query: 262 GTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE + T +SDV+SFGV+L E+ T
Sbjct: 214 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 17/209 (8%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ +A+K+L +E + EV
Sbjct: 12 EDFDIGRPLGKGKFGNVYLA------RERQSKFILALKVLFKTQLEKAGVEHQLRREVEI 65
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ P G++ L +++S T I A
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSRFDEQRTATYIT-ELAN 123
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H VI+RD K N+LL S+ K++DFG + P T + GT Y
Sbjct: 124 ALSYCHSKR--VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLCGTLDYL 177
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
PE I K D++S GV+ E L G
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 29/209 (13%)
Query: 102 GGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVRLIG 161
G FG V K L + VAVK+ I+ Q + EV L ++H ++++ IG
Sbjct: 35 GRFGCVWKAQ--------LLNEYVAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIG 85
Query: 162 Y----CCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLH---- 213
D + L+ F +GSL + L + + W IA A+GLA+LH
Sbjct: 86 AEKRGTSVDVDLWLITAFHEKGSLSDFLKANV---VSWNELCHIAETMARGLAYLHEDIP 142
Query: 214 ----GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAP 269
G + + +RD K+ N+LL ++ TA ++DFGLA G + T +GT Y AP
Sbjct: 143 GLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAP 202
Query: 270 EYISTG-----HLTTKSDVYSFGVVLLEL 293
E + + D+Y+ G+VL EL
Sbjct: 203 EVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 99 LGEGGFG-TVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH-REWLAEVIFLGQL-RHPH 155
LGEG FG V I D + + VAVK+L + + + ++E+ + + +H +
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTR--------------LKI 201
++ L+G C +D ++ E+ +G+L +L R L + +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 202 AIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVM 261
A A+G+ +L A I+RD N+L+ D K++DFGLA+ TT
Sbjct: 197 AYQVARGMEYL--ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 254
Query: 262 GTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE + T +SDV+SFGV+L E+ T
Sbjct: 255 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 92/216 (42%), Gaps = 14/216 (6%)
Query: 85 ELRAITQNFSSNYLLGEGGFGTVHKG-YIDDDLRQGLKAQAVAVKLLD--IEGLQGHREW 141
+++ ++F + +LG+G FG V + + +KA V L+D +E +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 142 LAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKI 201
L+ HP L + E V E++ G L H+ L T
Sbjct: 72 LSLA-----WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAA 126
Query: 202 AIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVM 261
I GL FLH ++YRD K NILLD D K++DFG+ K G T
Sbjct: 127 EI--ILGLQFLHSK--GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNEFC 180
Query: 262 GTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGR 297
GT Y APE + D +SFGV+L E+L G+
Sbjct: 181 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 132/285 (46%), Gaps = 34/285 (11%)
Query: 92 NFSSNYLLGEG-GFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLA---EVIF 147
+ S Y LGE GFG + + ++ DLR + VAVK+L + + +L E
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRDH---RDVAVKVLRADLARDPSFYLRFRREAQN 65
Query: 148 LGQLRHPHLVRLIGYCCEDEER------LLVYEFMPRGSLENHLFKRISVSLPWGTRLKI 201
L HP +V + Y + E +V E++ +L + + ++ +++
Sbjct: 66 AAALNHPAIVAV--YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA--IEV 121
Query: 202 AIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRV 260
A + L F H +N +I+RD K +NIL+ + K+ DFG+A+ + G++ T V
Sbjct: 122 IADACQALNFSH--QNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAV 179
Query: 261 MGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLR 320
+GT Y +PE + +SDVYS G VL E+LTG P + + V A ++R
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE------PPFTGDSPVSVAYQHVR 233
Query: 321 SSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAA 365
DP + ++ + L+ ++ NP++R + AA
Sbjct: 234 E--------DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAA 270
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 104/215 (48%), Gaps = 23/215 (10%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIE-GLQGH-----REWLAE 144
Q + +GEG +G V K DL+ G + VA+K + ++ G +G RE +A
Sbjct: 11 QQYECVAEIGEGAYGKVFKAR---DLKNG--GRFVALKRVRVQTGEEGMPLSTIRE-VAV 64
Query: 145 VIFLGQLRHPHLVRLIGYCC----EDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRL 199
+ L HP++VRL C + E +L LV+E + + L +L K +P T
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIK 123
Query: 200 KIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTR 259
+ +GL FLH + V++RD K NIL+ S KL+DFGLA++ S T
Sbjct: 124 DMMFQLLRGLDFLHS--HRVVHRDLKPQNILVTSSGQIKLADFGLARI---YSFQMALTS 178
Query: 260 VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELL 294
V+ T Y APE + T D++S G + E+
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE--WLAEVIFLGQLRHPH 155
LG+GGF ++ D D ++ + V +L L+ H++ E+ L +PH
Sbjct: 33 FLGKGGFAKCYE-ITDMDTKEVFAGKVVPKSML----LKPHQKEKMSTEIAIHKSLDNPH 87
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
+V G+ +D+ +V E R SL +R +V+ P +G+ +LH
Sbjct: 88 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYF--MRQTIQGVQYLHN- 144
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLA-KMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
N VI+RD K N+ L+ D K+ DFGLA K+ +G + GT Y APE +
Sbjct: 145 -NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPNYIAPEVLCK 200
Query: 275 GHLTTKSDVYSFGVVLLELLTGR 297
+ + D++S G +L LL G+
Sbjct: 201 KGHSFEVDIWSLGCILYTLLVGK 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 102/235 (43%), Gaps = 32/235 (13%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE-WLAEVIFLGQLRHPHLV 157
LG GGFG V + +I D + VA+K E +RE W E+ + +L HP++V
Sbjct: 23 LGTGGFGYVLR-WIHQD-----TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 158 RL------IGYCCEDEERLLVYEFMPRGSLENHLFK-RISVSLPWGTRLKIAIGAAKGLA 210
+ ++ LL E+ G L +L + L G + + L
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 136
Query: 211 FLHGAENPVIYRDFKTSNILLD---SDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
+LH EN +I+RD K NI+L K+ D G AK +G + T +GT Y
Sbjct: 137 YLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG---ELCTEFVGTLQYL 191
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSM----------DKLRPKSEQNLV 312
APE + T D +SFG + E +TG R K+R KS +++V
Sbjct: 192 APELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIV 246
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 102/235 (43%), Gaps = 32/235 (13%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE-WLAEVIFLGQLRHPHLV 157
LG GGFG V + +I D + VA+K E +RE W E+ + +L HP++V
Sbjct: 22 LGTGGFGYVLR-WIHQD-----TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 158 RL------IGYCCEDEERLLVYEFMPRGSLENHLFK-RISVSLPWGTRLKIAIGAAKGLA 210
+ ++ LL E+ G L +L + L G + + L
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 135
Query: 211 FLHGAENPVIYRDFKTSNILLD---SDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
+LH EN +I+RD K NI+L K+ D G AK +G + T +GT Y
Sbjct: 136 YLH--ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG---ELCTEFVGTLQYL 190
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTGRRSM----------DKLRPKSEQNLV 312
APE + T D +SFG + E +TG R K+R KS +++V
Sbjct: 191 APELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIV 245
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 118/265 (44%), Gaps = 33/265 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLA-EVIFLGQLRHPHLV 157
+G+G FG V KG ID+ +Q VA+K++D+E + E + E+ L Q ++
Sbjct: 31 IGKGSFGEVFKG-IDNRTQQ-----VVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+ G + + ++ E++ GS + L T LK + KGL +LH +
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEIL---KGLDYLHSEKK 141
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVT-TRVMGTYGYAAPEYISTGH 276
I+RD K +N+LL KL+DFG+A + ++T + +GT + APE I
Sbjct: 142 --IHRDIKAANVLLSEQGDVKLADFGVAG---QLTDTQIKRNTFVGTPFWMAPEVIQQSA 196
Query: 277 LTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAGQ 336
+K+D++S G+ +EL G + P L+ P P L G
Sbjct: 197 YDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP-------------PTLVGD 243
Query: 337 YSVKGAKEMAVLALQCISVNPKDRP 361
++ K C++ +P RP
Sbjct: 244 FT----KSFKEFIDACLNKDPSFRP 264
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 90/186 (48%), Gaps = 15/186 (8%)
Query: 119 GLKAQAVAVKLLDIEGLQGHREWLA-EVIFLGQLR-HPHLVRLIGYCCEDEERLLVYEFM 176
+K V + L E L+ RE E L Q+ HPH++ LI LV++ M
Sbjct: 123 AVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLM 182
Query: 177 PRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFT 236
+G L ++L +++++S TR I + ++FLH N +++RD K NILLD +
Sbjct: 183 RKGELFDYLTEKVALS-EKETR-SIMRSLLEAVSFLHA--NNIVHRDLKPENILLDDNMQ 238
Query: 237 AKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTT------KSDVYSFGVVL 290
+LSDFG + G + GT GY APE + T + D+++ GV+L
Sbjct: 239 IRLSDFGFSCHLEPGEKLR---ELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVIL 295
Query: 291 LELLTG 296
LL G
Sbjct: 296 FTLLAG 301
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 34/285 (11%)
Query: 92 NFSSNYLLGEG-GFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLA---EVIF 147
+ S Y LGE GFG + + ++ DLR + VAVK+L + + +L E
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRLH---RDVAVKVLRADLARDPSFYLRFRREAQN 65
Query: 148 LGQLRHPHLVRLIGYCCEDEER------LLVYEFMPRGSLENHLFKRISVSLPWGTRLKI 201
L HP +V + Y + E +V E++ +L + + ++ +++
Sbjct: 66 AAALNHPAIVAV--YATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA--IEV 121
Query: 202 AIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRV 260
A + L F H +N +I+RD K +NI++ + K+ DFG+A+ + G++ T V
Sbjct: 122 IADACQALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 261 MGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLR 320
+GT Y +PE + +SDVYS G VL E+LTG P + + V A ++R
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE------PPFTGDSPVSVAYQHVR 233
Query: 321 SSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAA 365
DP + ++ + L+ ++ NP++R + AA
Sbjct: 234 E--------DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAA 270
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 96/213 (45%), Gaps = 19/213 (8%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWL-AEVIFLGQL-RHPHL 156
LG G FG V + L + VAVK+L +E L +E+ + L +H ++
Sbjct: 54 LGAGAFGKVVEA-TAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTR--------------LKIA 202
V L+G C L++ E+ G L N L ++ L + L +
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFS 172
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
A+G+AFL A I+RD N+LL + AK+ DFGLA+ SN V
Sbjct: 173 SQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 230
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE I T +SDV+S+G++L E+ +
Sbjct: 231 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWL-AEVIFLGQL-RHPHL 156
LG G FG V + L + VAVK+L +E L +E+ + L +H ++
Sbjct: 54 LGAGAFGKVVEA-TAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISV----------SLPWGTR--LKIAIG 204
V L+G C L++ E+ G L N L ++ V + TR L +
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQ 172
Query: 205 AAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY 264
A+G+AFL A I+RD N+LL + AK+ DFGLA+ SN V
Sbjct: 173 VAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 265 GYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE I T +SDV+S+G++L E+ +
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 34/285 (11%)
Query: 92 NFSSNYLLGEG-GFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLA---EVIF 147
+ S Y LGE GFG + + ++ DLR + VAVK+L + + +L E
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRDH---RDVAVKVLRADLARDPSFYLRFRREAQN 65
Query: 148 LGQLRHPHLVRLIGYCCEDEER------LLVYEFMPRGSLENHLFKRISVSLPWGTRLKI 201
L HP +V + Y + E +V E++ +L + + ++ +++
Sbjct: 66 AAALNHPAIVAV--YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA--IEV 121
Query: 202 AIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRV 260
A + L F H +N +I+RD K +NI++ + K+ DFG+A+ + G++ T V
Sbjct: 122 IADACQALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 261 MGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLR 320
+GT Y +PE + +SDVYS G VL E+LTG P + + V A ++R
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE------PPFTGDSPVSVAYQHVR 233
Query: 321 SSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAA 365
DP + ++ + L+ ++ NP++R + AA
Sbjct: 234 E--------DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAA 270
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 82/172 (47%), Gaps = 13/172 (7%)
Query: 131 DIEGLQGHREWLAEVIFLGQLRHPHLVRLIGYCCEDEERLL-VYEFMPRGSLENHLFKRI 189
DI+ +Q + +F HP LV L C + E RL V E++ G L H+ ++
Sbjct: 63 DIDWVQTEKH-----VFEQASNHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQR 116
Query: 190 SVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGP 249
+ I A L +LH E +IYRD K N+LLDS+ KL+D+G+ K G
Sbjct: 117 KLPEEHARFYSAEISLA--LNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 172
Query: 250 EGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMD 301
+T T+ GT Y APE + D ++ GV++ E++ GR D
Sbjct: 173 RPGDT--TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 96/209 (45%), Gaps = 25/209 (11%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLA-----EVIFLGQLR- 152
+G G +GTV+K R VA+K + + G L EV L +L
Sbjct: 17 IGVGAYGTVYKA------RDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEA 70
Query: 153 --HPHLVRLIGYCCE---DEE--RLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGA 205
HP++VRL+ C D E LV+E + + L +L K LP T +
Sbjct: 71 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQF 129
Query: 206 AKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYG 265
+GL FLH N +++RD K NIL+ S T KL+DFGLA++ S T V+ T
Sbjct: 130 LRGLDFLHA--NCIVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALTPVVVTLW 184
Query: 266 YAAPEYISTGHLTTKSDVYSFGVVLLELL 294
Y APE + T D++S G + E+
Sbjct: 185 YRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 102/220 (46%), Gaps = 18/220 (8%)
Query: 87 RAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL--DIEGLQGHREW-LA 143
R +F+ +LG+G FG V R+G + + A+K+L D+ E +
Sbjct: 15 RVKLTDFNFLMVLGKGSFGKVMLAD-----RKGTE-ELYAIKILKKDVVIQDDDVECTMV 68
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
E L L P + + C + +RL V E++ G L H+ + P
Sbjct: 69 EKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAE 128
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTR-VM 261
I GL FLH + +IYRD K N++LDS+ K++DFG+ K E VTTR
Sbjct: 129 ISI--GLFFLH--KRGIIYRDLKLDNVMLDSEGHIKIADFGMCK---EHMMDGVTTREFC 181
Query: 262 GTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMD 301
GT Y APE I+ D +++GV+L E+L G+ D
Sbjct: 182 GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 92/216 (42%), Gaps = 14/216 (6%)
Query: 85 ELRAITQNFSSNYLLGEGGFGTVHKG-YIDDDLRQGLKAQAVAVKLLD--IEGLQGHREW 141
+++ ++F + +LG+G FG V + + +KA V L+D +E +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 142 LAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKI 201
L+ HP L + E V E++ G L H+ L T
Sbjct: 71 LSLA-----WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAA 125
Query: 202 AIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVM 261
I GL FLH ++YRD K NILLD D K++DFG+ K G T
Sbjct: 126 EI--ILGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNXFC 179
Query: 262 GTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGR 297
GT Y APE + D +SFGV+L E+L G+
Sbjct: 180 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 94/219 (42%), Gaps = 29/219 (13%)
Query: 99 LGEGGFGTVHK----GYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWL-AEVIFLGQL-R 152
LG G FG V + G I D A VAVK+L RE L +E+ L L
Sbjct: 54 LGAGAFGKVVEATAYGLIKSD-----AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 153 HPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKI----------- 201
H ++V L+G C L++ E+ G L N L ++ + T I
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 202 -----AIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHV 256
+ AKG+AFL A I+RD NILL K+ DFGLA+ SN V
Sbjct: 169 DLLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVV 226
Query: 257 TTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE I T +SDV+S+G+ L EL +
Sbjct: 227 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 94/219 (42%), Gaps = 29/219 (13%)
Query: 99 LGEGGFGTVHK----GYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWL-AEVIFLGQL-R 152
LG G FG V + G I D A VAVK+L RE L +E+ L L
Sbjct: 47 LGAGAFGKVVEATAYGLIKSD-----AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 101
Query: 153 HPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKI----------- 201
H ++V L+G C L++ E+ G L N L ++ + T I
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 161
Query: 202 -----AIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHV 256
+ AKG+AFL A I+RD NILL K+ DFGLA+ SN V
Sbjct: 162 DLLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 219
Query: 257 TTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE I T +SDV+S+G+ L EL +
Sbjct: 220 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 88/187 (47%), Gaps = 15/187 (8%)
Query: 131 DIEGLQGHREWLAEVIFLGQLRHPHLVRLIGYCCEDEERLL-VYEFMPRGSLENHLFKRI 189
DI+ +Q + +F HP LV L C + E RL V E++ G L H+ ++
Sbjct: 95 DIDWVQTEKH-----VFEQASNHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQR 148
Query: 190 SVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGP 249
+ I A L +LH E +IYRD K N+LLDS+ KL+D+G+ K G
Sbjct: 149 KLPEEHARFYSAEISLA--LNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204
Query: 250 EGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKL--RPKS 307
+T T+ GT Y APE + D ++ GV++ E++ GR D +
Sbjct: 205 RPGDT--TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP 262
Query: 308 EQNLVDW 314
+QN D+
Sbjct: 263 DQNTEDY 269
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 82/172 (47%), Gaps = 13/172 (7%)
Query: 131 DIEGLQGHREWLAEVIFLGQLRHPHLVRLIGYCCEDEERLL-VYEFMPRGSLENHLFKRI 189
DI+ +Q + +F HP LV L C + E RL V E++ G L H+ ++
Sbjct: 48 DIDWVQTEKH-----VFEQASNHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQR 101
Query: 190 SVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGP 249
+ I A L +LH E +IYRD K N+LLDS+ KL+D+G+ K G
Sbjct: 102 KLPEEHARFYSAEISLA--LNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 157
Query: 250 EGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMD 301
+T T+ GT Y APE + D ++ GV++ E++ GR D
Sbjct: 158 RPGDT--TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 42/297 (14%)
Query: 99 LGEGGFGTVHKGYIDDD---LRQGLKAQAVAVKLLDIEGL--QGHREWLAEVIFLGQL-R 152
LG G FG V I+ D + + + VAVK+L EG HR ++E+ L +
Sbjct: 36 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLK-EGATHSEHRALMSELKILIHIGH 90
Query: 153 HPHLVRLIGYCCEDEERLLV-YEFMPRGSLENHLFKRISVSLPWGT-------------R 198
H ++V L+G C + L+V EF G+L +L + + +P+ T
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 199 LKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTT 258
+ + AKG+ FL A I+RD NILL K+ DFGLA+ + +
Sbjct: 151 ICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 259 RVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPY 318
+ APE I T +SDV+SFGV+L E+ + S P + +
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS-----PYPGVKIDEEFCRR 263
Query: 319 LRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
L+ R+R A Y+ EM L C P RP + +V L +LL
Sbjct: 264 LKEGTRMR-------APDYT---TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 94/219 (42%), Gaps = 29/219 (13%)
Query: 99 LGEGGFGTVHK----GYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWL-AEVIFLGQL-R 152
LG G FG V + G I D A VAVK+L RE L +E+ L L
Sbjct: 31 LGAGAFGKVVEATAYGLIKSD-----AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 85
Query: 153 HPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKI----------- 201
H ++V L+G C L++ E+ G L N L ++ + T I
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145
Query: 202 -----AIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHV 256
+ AKG+AFL A I+RD NILL K+ DFGLA+ SN V
Sbjct: 146 DLLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 203
Query: 257 TTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE I T +SDV+S+G+ L EL +
Sbjct: 204 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 130/285 (45%), Gaps = 34/285 (11%)
Query: 92 NFSSNYLLGEG-GFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLA---EVIF 147
+ S Y LGE GFG + + ++ DLR + VAVK+L + + +L E
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRDH---RDVAVKVLRADLARDPSFYLRFRREAQN 65
Query: 148 LGQLRHPHLVRLIGYCCEDEER------LLVYEFMPRGSLENHLFKRISVSLPWGTRLKI 201
L HP +V + Y + E +V E++ +L + + ++ +++
Sbjct: 66 AAALNHPAIVAV--YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA--IEV 121
Query: 202 AIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRV 260
A + L F H +N +I+RD K +NI++ + K+ DFG+A+ + G++ T V
Sbjct: 122 IADACQALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 261 MGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLR 320
+GT Y +PE + +SDVYS G VL E+LTG P S A ++R
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDS------VAYQHVR 233
Query: 321 SSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAA 365
DP + ++ + L+ ++ NP++R + AA
Sbjct: 234 E--------DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAA 270
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 82/172 (47%), Gaps = 13/172 (7%)
Query: 131 DIEGLQGHREWLAEVIFLGQLRHPHLVRLIGYCCEDEERLL-VYEFMPRGSLENHLFKRI 189
DI+ +Q + +F HP LV L C + E RL V E++ G L H+ ++
Sbjct: 52 DIDWVQTEKH-----VFEQASNHPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQR 105
Query: 190 SVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGP 249
+ I A L +LH E +IYRD K N+LLDS+ KL+D+G+ K G
Sbjct: 106 KLPEEHARFYSAEISLA--LNYLH--ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 161
Query: 250 EGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMD 301
+T T+ GT Y APE + D ++ GV++ E++ GR D
Sbjct: 162 RPGDT--TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKL--LDIEGLQGHREWLAEVIFLGQLRHPHL 156
+GEG +G V+K + + + VA+K LD E + E+ L +L HP++
Sbjct: 29 VGEGTYGVVYKA-------KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWG---TRLKIAI-GAAKGLAFL 212
V LI + LV+EFM + K++ G +++KI + +G+A
Sbjct: 82 VSLIDVIHSERCLTLVFEFMEKD------LKKVLDENKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 213 HGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMG--PEGSNTHVTTRVMGTYGYAAPE 270
H ++ +++RD K N+L++SD KL+DFGLA+ P S TH T Y AP+
Sbjct: 136 H--QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV----TLWYRAPD 189
Query: 271 YI-STGHLTTKSDVYSFGVVLLELLTGR 297
+ + +T D++S G + E++TG+
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 15/210 (7%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW---LAEVIF 147
++F +LGEG F TV R+ ++ A+K+L+ + + E
Sbjct: 32 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 85
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
+ +L HP V+L +DE+ + G L ++ ++I TR A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYI-RKIGSFDETCTRFYTA-EIVS 143
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGY 266
L +LHG +I+RD K NILL+ D +++DFG AK + PE + V GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQY 200
Query: 267 AAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+PE ++ + SD+++ G ++ +L+ G
Sbjct: 201 VSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 94/219 (42%), Gaps = 29/219 (13%)
Query: 99 LGEGGFGTVHK----GYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWL-AEVIFLGQL-R 152
LG G FG V + G I D A VAVK+L RE L +E+ L L
Sbjct: 49 LGAGAFGKVVEATAYGLIKSD-----AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 103
Query: 153 HPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKI----------- 201
H ++V L+G C L++ E+ G L N L ++ + T I
Sbjct: 104 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 163
Query: 202 -----AIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHV 256
+ AKG+AFL A I+RD NILL K+ DFGLA+ SN V
Sbjct: 164 DLLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 221
Query: 257 TTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE I T +SDV+S+G+ L EL +
Sbjct: 222 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKL--LDIEGLQGHREWLAEVIFLGQLRHPHL 156
+GEG +G V+K + + + VA+K LD E + E+ L +L HP++
Sbjct: 29 VGEGTYGVVYKA-------KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWG---TRLKIAI-GAAKGLAFL 212
V LI + LV+EFM + K++ G +++KI + +G+A
Sbjct: 82 VSLIDVIHSERCLTLVFEFMEKD------LKKVLDENKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 213 HGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMG--PEGSNTHVTTRVMGTYGYAAPE 270
H ++ +++RD K N+L++SD KL+DFGLA+ P S TH T Y AP+
Sbjct: 136 H--QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV----TLWYRAPD 189
Query: 271 YI-STGHLTTKSDVYSFGVVLLELLTGR 297
+ + +T D++S G + E++TG+
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW---LAEVIF 147
++F +LGEG F TV R+ ++ A+K+L+ + + E
Sbjct: 9 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 62
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
+ +L HP V+L +DE+ + G L ++ ++I TR A
Sbjct: 63 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 120
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L +LHG +I+RD K NILL+ D +++DFG AK+ S +GT Y
Sbjct: 121 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 178
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
+PE ++ SD+++ G ++ +L+ G
Sbjct: 179 SPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 94/219 (42%), Gaps = 29/219 (13%)
Query: 99 LGEGGFGTVHK----GYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWL-AEVIFLGQL-R 152
LG G FG V + G I D A VAVK+L RE L +E+ L L
Sbjct: 54 LGAGAFGKVVEATAYGLIKSD-----AAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 153 HPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKI----------- 201
H ++V L+G C L++ E+ G L N L ++ + T I
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 202 -----AIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHV 256
+ AKG+AFL A I+RD NILL K+ DFGLA+ SN V
Sbjct: 169 DLLSFSYQVAKGMAFL--ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV 226
Query: 257 TTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE I T +SDV+S+G+ L EL +
Sbjct: 227 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 34/285 (11%)
Query: 92 NFSSNYLLGEG-GFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLA---EVIF 147
+ S Y LGE GFG + + ++ DLR + VAVK+L + + +L E
Sbjct: 9 HLSDRYELGEILGFGGMSEVHLARDLRLH---RDVAVKVLRADLARDPSFYLRFRREAQN 65
Query: 148 LGQLRHPHLVRLIGYCCEDEER------LLVYEFMPRGSLENHLFKRISVSLPWGTRLKI 201
L HP +V + Y + E +V E++ +L + + ++ +++
Sbjct: 66 AAALNHPAIVAV--YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA--IEV 121
Query: 202 AIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRV 260
A + L F H +N +I+RD K +NI++ + K+ DFG+A+ + G++ T V
Sbjct: 122 IADACQALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 179
Query: 261 MGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLR 320
+GT Y +PE + +SDVYS G VL E+LTG P + + V A ++R
Sbjct: 180 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE------PPFTGDSPVSVAYQHVR 233
Query: 321 SSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAA 365
DP + ++ + L+ ++ NP++R + AA
Sbjct: 234 E--------DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAA 270
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW---LAEVIF 147
++F +LGEG F TV R+ ++ A+K+L+ + + E
Sbjct: 10 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 63
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
+ +L HP V+L +DE+ + G L ++ ++I TR A
Sbjct: 64 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 121
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L +LHG +I+RD K NILL+ D +++DFG AK+ S +GT Y
Sbjct: 122 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 179
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
+PE ++ SD+++ G ++ +L+ G
Sbjct: 180 SPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW---LAEVIF 147
++F +LGEG F TV R+ ++ A+K+L+ + + E
Sbjct: 8 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 61
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
+ +L HP V+L +DE+ + G L ++ ++I TR A
Sbjct: 62 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 119
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L +LHG +I+RD K NILL+ D +++DFG AK+ S +GT Y
Sbjct: 120 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 177
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
+PE ++ SD+++ G ++ +L+ G
Sbjct: 178 SPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW---LAEVIF 147
++F +LGEG F TV R+ ++ A+K+L+ + + E
Sbjct: 7 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 60
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
+ +L HP V+L +DE+ + G L ++ ++I TR A
Sbjct: 61 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 118
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L +LHG +I+RD K NILL+ D +++DFG AK+ S +GT Y
Sbjct: 119 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 176
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
+PE ++ SD+++ G ++ +L+ G
Sbjct: 177 SPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW---LAEVIF 147
++F +LGEG F TV R+ ++ A+K+L+ + + E
Sbjct: 33 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 86
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
+ +L HP V+L +DE+ + G L ++ ++I TR A
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 144
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGY 266
L +LHG +I+RD K NILL+ D +++DFG AK + PE + V GT Y
Sbjct: 145 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQY 201
Query: 267 AAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+PE ++ SD+++ G ++ +L+ G
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIF 147
++F LG+G FG V+ R+ +A+K+L +E + EV
Sbjct: 12 EDFDIGRPLGKGKFGNVYLA------RERQSKFILALKVLFKTQLEKAGVEHQLRREVEI 65
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
LRHP+++RL GY + L+ E+ P G++ L +++S T I A
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL-QKLSRFDEQRTATYIT-ELAN 123
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L++ H VI+RD K N+LL S+ K++DFG + P + GT Y
Sbjct: 124 ALSYCHSKR--VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----DTLCGTLDYL 177
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
PE I K D++S GV+ E L G
Sbjct: 178 PPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 125/294 (42%), Gaps = 39/294 (13%)
Query: 99 LGEGGFGTVHKGYIDDD---LRQGLKAQAVAVKLLDIEGL--QGHREWLAEVIFLGQL-R 152
LG G FG V I+ D + + + VAVK+L EG HR ++E+ L +
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLK-EGATHSEHRALMSELKILIHIGH 89
Query: 153 HPHLVRLIGYCCEDEERLLV-YEFMPRGSLENHLFKRISVSLPWGTRLK----------I 201
H ++V L+G C + L+V EF G+L +L + + +P+ K
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 202 AIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVM 261
+ AKG+ FL A I+RD NILL K+ DFGLA+ + +
Sbjct: 150 SFQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDAR 207
Query: 262 GTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRS 321
+ APE I T +SDV+SFGV+L E+ + S P + + L+
Sbjct: 208 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS-----PYPGVKIDEEFXRRLKE 262
Query: 322 SRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
R+R A Y+ EM L C P RP + +V L +LL
Sbjct: 263 GTRMR-------APDYT---TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 306
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 87 RAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE---WLA 143
+ +F LLG+G FG V +R+ + A+K+L E + E +
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVIL------VREKATGRYYAMKILRKEVIIAKDEVAHTVT 57
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
E L RHP L L Y + +RL V E+ G L HL R V R A
Sbjct: 58 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGA 115
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
L +LH + V+YRD K N++LD D K++DFGL K G T T G
Sbjct: 116 -EIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCG 170
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGR 297
T Y APE + D + GVV+ E++ GR
Sbjct: 171 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 97/208 (46%), Gaps = 26/208 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDI----EGLQGHREWLAEVIFLGQLR-- 152
+G G +GTV+K R VA+K + + EGL + EV L +L
Sbjct: 12 IGVGAYGTVYKA------RDPHSGHFVALKSVRVPNGEEGLP--ISTVREVALLRRLEAF 63
Query: 153 -HPHLVRLIGYCCE---DEE--RLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAA 206
HP++VRL+ C D E LV+E + + L +L K LP T +
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 207 KGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGY 266
+GL FLH N +++RD K NIL+ S T KL+DFGLA++ S V+ T Y
Sbjct: 123 RGLDFLHA--NCIVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALAPVVVTLWY 177
Query: 267 AAPEYISTGHLTTKSDVYSFGVVLLELL 294
APE + T D++S G + E+
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 87 RAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE---WLA 143
+ +F LLG+G FG V +R+ + A+K+L E + E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVIL------VREKATGRYYAMKILRKEVIIAKDEVAHTVT 54
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
E L RHP L L Y + +RL V E+ G L HL R V R A
Sbjct: 55 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGA 112
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
L +LH + V+YRD K N++LD D K++DFGL K G T T G
Sbjct: 113 -EIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCG 167
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGR 297
T Y APE + D + GVV+ E++ GR
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 34/285 (11%)
Query: 92 NFSSNYLLGEG-GFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLA---EVIF 147
+ S Y LGE GFG + + ++ DLR + VAVK+L + + +L E
Sbjct: 26 HLSDRYELGEILGFGGMSEVHLARDLRLH---RDVAVKVLRADLARDPSFYLRFRREAQN 82
Query: 148 LGQLRHPHLVRLIGYCCEDEER------LLVYEFMPRGSLENHLFKRISVSLPWGTRLKI 201
L HP +V + Y + E +V E++ +L + + ++ +++
Sbjct: 83 AAALNHPAIVAV--YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRA--IEV 138
Query: 202 AIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRV 260
A + L F H +N +I+RD K +NI++ + K+ DFG+A+ + G++ T V
Sbjct: 139 IADACQALNFSH--QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV 196
Query: 261 MGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLR 320
+GT Y +PE + +SDVYS G VL E+LTG P + + V A ++R
Sbjct: 197 IGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE------PPFTGDSPVSVAYQHVR 250
Query: 321 SSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAA 365
DP + ++ + L+ ++ NP++R + AA
Sbjct: 251 E--------DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAA 287
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 99 LGEGGFGTVHKGY---IDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL--RH 153
LGEG FG V ID D + +A VAVK+L + + L + + ++ +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD--KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 154 PHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLK------------- 200
+++ L+G C +D ++ E+ +G+L +L R + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 201 -IAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTR 259
A+G+ +L A I+RD N+L+ + K++DFGLA+ TT
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 260 VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V+K + + A K++D + + +++ E+ L HP++V+
Sbjct: 45 LGDGAFGKVYKA------QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L+ + ++ EF G+++ + + + L + L +LH +N
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLH--DNK 155
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTR---VMGTYGYAAPEYISTG 275
+I+RD K NIL D KL+DFG++ NT R +GT + APE +
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVS-----AKNTRTIQRRDSFIGTPYWMAPEVVMCE 210
Query: 276 H-----LTTKSDVYSFGVVLLELLTGRRSMDKLRP 305
K+DV+S G+ L+E+ +L P
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNP 245
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH-REWLA-EVIFLGQLRHPH 155
LG+GGF + D D ++ + V LL L+ H RE ++ E+ L H H
Sbjct: 46 FLGKGGFAKCFE-ISDADTKEVFAGKIVPKSLL----LKPHQREKMSMEISIHRSLAHQH 100
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
+V G+ +++ +V E R SL +R +++ P I G +LH
Sbjct: 101 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI--VLGCQYLH-- 156
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLA-KMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
N VI+RD K N+ L+ D K+ DFGLA K+ +G V + GT Y APE +S
Sbjct: 157 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSK 213
Query: 275 GHLTTKSDVYSFGVVLLELLTGR 297
+ + DV+S G ++ LL G+
Sbjct: 214 KGHSFEVDVWSIGCIMYTLLVGK 236
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH-REWLA-EVIFLGQLRHPH 155
LG+GGF + D D ++ + V LL L+ H RE ++ E+ L H H
Sbjct: 48 FLGKGGFAKCFE-ISDADTKEVFAGKIVPKSLL----LKPHQREKMSMEISIHRSLAHQH 102
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
+V G+ +++ +V E R SL +R +++ P I G +LH
Sbjct: 103 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI--VLGCQYLH-- 158
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLA-KMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
N VI+RD K N+ L+ D K+ DFGLA K+ +G V + GT Y APE +S
Sbjct: 159 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSK 215
Query: 275 GHLTTKSDVYSFGVVLLELLTGR 297
+ + DV+S G ++ LL G+
Sbjct: 216 KGHSFEVDVWSIGCIMYTLLVGK 238
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 10/202 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+GEG +G V Y D +R K + K+ E + L E+ L + RH +++
Sbjct: 51 IGEGAYGMVSSAY--DHVR---KTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIG 105
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRI-SVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
+ + ++ + +E L+K + S L +GL ++H A
Sbjct: 106 IRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSAN- 164
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMG-PEGSNTHVTTRVMGTYGYAAPEYISTGH 276
V++RD K SN+L+++ K+ DFGLA++ PE +T T + T Y APE +
Sbjct: 165 -VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSK 223
Query: 277 LTTKS-DVYSFGVVLLELLTGR 297
TKS D++S G +L E+L+ R
Sbjct: 224 GYTKSIDIWSVGCILAEMLSNR 245
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 120/295 (40%), Gaps = 53/295 (17%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+F L+G GGFG V K + + + +K + + RE A L +L
Sbjct: 12 DFKEIELIGSGGFGQVFKA------KHRIDGKTYVIKRVKYNNEKAEREVKA----LAKL 61
Query: 152 RHPHLVRLIG------YCCEDEER----------LLVYEFMPRGSLENHLFKRISVSLPW 195
H ++V G Y E + + EF +G+LE + KR L
Sbjct: 62 DHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDK 121
Query: 196 GTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTH 255
L++ KG+ ++H + +I RD K SNI L K+ DFGL N
Sbjct: 122 VLALELFEQITKGVDYIHSKK--LINRDLKPSNIFLVDTKQVKIGDFGLV---TSLKNDG 176
Query: 256 VTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWA 315
R GT Y +PE IS+ + D+Y+ G++L ELL ++ D A
Sbjct: 177 KRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---------------HVCDTA 221
Query: 316 KPYLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATL 370
+S ++ D R + KE +L + +S P+DRP + ++ TL
Sbjct: 222 ---FETS---KFFTDLRDGIISDIFDKKEKTLLQ-KLLSKKPEDRPNTSEILRTL 269
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 94/215 (43%), Gaps = 17/215 (7%)
Query: 87 RAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE---WLA 143
+ +F LLG+G FG V +R+ + A+K+L E + E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVIL------VREKATGRYYAMKILRKEVIIAKDEVAHTVT 54
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
E L RHP L L Y + +RL V E+ G L HL + +
Sbjct: 55 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +A L +LH + V+YRD K N++LD D K++DFGL K G T T G
Sbjct: 114 IVSA--LEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCG 167
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGR 297
T Y APE + D + GVV+ E++ GR
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 18/203 (8%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDI----EGLQG-HREWLAEVIFLGQLR 152
LGEG F TV+K R Q VA+K + + E G +R L E+ L +L
Sbjct: 17 FLGEGQFATVYKA------RDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 153 HPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFL 212
HP+++ L+ LV++FM LE + K S+ L + +GL +L
Sbjct: 71 HPNIIGLLDAFGHKSNISLVFDFM-ETDLEV-IIKDNSLVLTPSHIKAYMLMTLQGLEYL 128
Query: 213 HGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYI 272
H ++ +++RD K +N+LLD + KL+DFGLAK GS + T Y APE +
Sbjct: 129 H--QHWILHRDLKPNNLLLDENGVLKLADFGLAKSF--GSPNRAYXHQVVTRWYRAPELL 184
Query: 273 STGHLT-TKSDVYSFGVVLLELL 294
+ D+++ G +L ELL
Sbjct: 185 FGARMYGVGVDMWAVGCILAELL 207
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 97/208 (46%), Gaps = 26/208 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDI----EGLQGHREWLAEVIFLGQLR-- 152
+G G +GTV+K R VA+K + + EGL + EV L +L
Sbjct: 12 IGVGAYGTVYKA------RDPHSGHFVALKSVRVPNGEEGLP--ISTVREVALLRRLEAF 63
Query: 153 -HPHLVRLIGYCCE---DEE--RLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAA 206
HP++VRL+ C D E LV+E + + L +L K LP T +
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 207 KGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGY 266
+GL FLH N +++RD K NIL+ S T KL+DFGLA++ S V+ T Y
Sbjct: 123 RGLDFLHA--NCIVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALDPVVVTLWY 177
Query: 267 AAPEYISTGHLTTKSDVYSFGVVLLELL 294
APE + T D++S G + E+
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 15/210 (7%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW---LAEVIF 147
++F +LGEG F TV R+ ++ A+K+L+ + + E
Sbjct: 30 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 83
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
+ +L HP V+L +DE+ + G L ++ ++I TR A
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 141
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGY 266
L +LHG +I+RD K NILL+ D +++DFG AK + PE V GT Y
Sbjct: 142 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFV-GTAQY 198
Query: 267 AAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+PE ++ SD+++ G ++ +L+ G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW---LAEVIF 147
++F +LGEG F TV R+ ++ A+K+L+ + + E
Sbjct: 29 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 82
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
+ +L HP V+L +DE+ + G L ++ ++I TR A
Sbjct: 83 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 140
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGY 266
L +LHG +I+RD K NILL+ D +++DFG AK + PE + V GT Y
Sbjct: 141 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GTAQY 197
Query: 267 AAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+PE ++ SD+++ G ++ +L+ G
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW---LAEVIF 147
++F +LGEG F TV R+ ++ A+K+L+ + + E
Sbjct: 30 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 83
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
+ +L HP V+L +DE+ + G L ++ ++I TR A
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 141
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L +LHG +I+RD K NILL+ D +++DFG AK+ S +GT Y
Sbjct: 142 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 199
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
+PE ++ SD+++ G ++ +L+ G
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW---LAEVIF 147
++F +LGEG F TV R+ ++ A+K+L+ + + E
Sbjct: 30 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 83
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
+ +L HP V+L +DE+ + G L ++ ++I TR A
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 141
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L +LHG +I+RD K NILL+ D +++DFG AK+ S +GT Y
Sbjct: 142 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 199
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
+PE ++ SD+++ G ++ +L+ G
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW---LAEVIF 147
++F +LGEG F TV R+ ++ A+K+L+ + + E
Sbjct: 32 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 85
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
+ +L HP V+L +DE+ + G L ++ ++I TR A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 143
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L +LHG +I+RD K NILL+ D +++DFG AK+ S +GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
+PE ++ SD+++ G ++ +L+ G
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 125/296 (42%), Gaps = 41/296 (13%)
Query: 99 LGEGGFGTVHKGYIDDD---LRQGLKAQAVAVKLLDIEGL--QGHREWLAEVIFLGQL-R 152
LG G FG V I+ D + + + VAVK+L EG HR ++E+ L +
Sbjct: 37 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLK-EGATHSEHRALMSELKILIHIGH 91
Query: 153 HPHLVRLIGYCCEDEERLLV-YEFMPRGSLENHLFKRISVSLPWGTR------------L 199
H ++V L+G C + L+V EF G+L +L + + +P+ +
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLI 151
Query: 200 KIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTR 259
+ AKG+ FL A I+RD NILL K+ DFGLA+ + +
Sbjct: 152 XYSFQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 260 VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYL 319
+ APE I T +SDV+SFGV+L E+ + S P + + L
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS-----PYPGVKIDEEFCRRL 264
Query: 320 RSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
+ R+R A Y+ EM L C P RP + +V L +LL
Sbjct: 265 KEGTRMR-------APDYT---TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 125/294 (42%), Gaps = 39/294 (13%)
Query: 99 LGEGGFGTVHKGYIDDD---LRQGLKAQAVAVKLLDIEGL--QGHREWLAEVIFLGQL-R 152
LG G FG V I+ D + + + VAVK+L EG HR ++E+ L +
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLK-EGATHSEHRALMSELKILIHIGH 89
Query: 153 HPHLVRLIGYCCEDEERLLV-YEFMPRGSLENHLFKRISVSLPWGTRLK----------I 201
H ++V L+G C + L+V EF G+L +L + + +P+ K
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 202 AIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVM 261
+ AKG+ FL A I+RD NILL K+ DFGLA+ + +
Sbjct: 150 SFQVAKGMEFL--ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 207
Query: 262 GTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRS 321
+ APE I T +SDV+SFGV+L E+ + S P + + L+
Sbjct: 208 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS-----PYPGVKIDEEFCRRLKE 262
Query: 322 SRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
R+R A Y+ EM L C P RP + +V L +LL
Sbjct: 263 GTRMR-------APDYT---TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 306
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW---LAEVIF 147
++F +LGEG F TV R+ ++ A+K+L+ + + E
Sbjct: 14 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 67
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
+ +L HP V+L +DE+ + G L ++ ++I TR A
Sbjct: 68 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 125
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L +LHG +I+RD K NILL+ D +++DFG AK+ S +GT Y
Sbjct: 126 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 183
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
+PE ++ SD+++ G ++ +L+ G
Sbjct: 184 SPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW---LAEVIF 147
++F +LGEG F TV R+ ++ A+K+L+ + + E
Sbjct: 33 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 86
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
+ +L HP V+L +DE+ + G L ++ ++I TR A
Sbjct: 87 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 144
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L +LHG +I+RD K NILL+ D +++DFG AK+ S +GT Y
Sbjct: 145 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 202
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
+PE ++ SD+++ G ++ +L+ G
Sbjct: 203 SPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW---LAEVIF 147
++F +LGEG F TV R+ ++ A+K+L+ + + E
Sbjct: 32 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 85
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
+ +L HP V+L +DE+ + G L ++ ++I TR A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 143
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L +LHG +I+RD K NILL+ D +++DFG AK+ S +GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
+PE ++ SD+++ G ++ +L+ G
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW---LAEVIF 147
++F +LGEG F TV R+ ++ A+K+L+ + + E
Sbjct: 32 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 85
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
+ +L HP V+L +DE+ + G L ++ ++I TR A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 143
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L +LHG +I+RD K NILL+ D +++DFG AK+ S +GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
+PE ++ SD+++ G ++ +L+ G
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V+K + + A K++D + + +++ E+ L HP++V+
Sbjct: 45 LGDGAFGKVYKA------QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L+ + ++ EF G+++ + + + L + L +LH +N
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLH--DNK 155
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTR---VMGTYGYAAPEYISTG 275
+I+RD K NIL D KL+DFG++ NT R +GT + APE +
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVS-----AKNTRXIQRRDSFIGTPYWMAPEVVMCE 210
Query: 276 H-----LTTKSDVYSFGVVLLELLTGRRSMDKLRP 305
K+DV+S G+ L+E+ +L P
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNP 245
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 96/215 (44%), Gaps = 22/215 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V+K + + A K++D + + +++ E+ L HP++V+
Sbjct: 45 LGDGAFGKVYKA------QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L+ + ++ EF G+++ + + + L + L +LH +N
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLH--DNK 155
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTR---VMGTYGYAAPEYISTG 275
+I+RD K NIL D KL+DFG++ NT R +GT + APE +
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVS-----AKNTRXIQRRDXFIGTPYWMAPEVVMCE 210
Query: 276 H-----LTTKSDVYSFGVVLLELLTGRRSMDKLRP 305
K+DV+S G+ L+E+ +L P
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNP 245
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 97/220 (44%), Gaps = 26/220 (11%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWL-AEVIFLGQL-RHPHL 156
LG G FG V + L + VAVK+L +E L +E+ + L +H ++
Sbjct: 39 LGAGAFGKVVEA-TAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENI 97
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSL-------------------PWGT 197
V L+G C L++ E+ G L N L ++ L P
Sbjct: 98 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLEL 157
Query: 198 R--LKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTH 255
R L + A+G+AFL A I+RD N+LL + AK+ DFGLA+ SN
Sbjct: 158 RDLLHFSSQVAQGMAFL--ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 215
Query: 256 VTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
V + APE I T +SDV+S+G++L E+ +
Sbjct: 216 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW---LAEVIF 147
++F +LGEG F TV R+ ++ A+K+L+ + + E
Sbjct: 32 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 85
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
+ +L HP V+L +DE+ + G L ++ ++I TR A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 143
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L +LHG +I+RD K NILL+ D +++DFG AK+ S +GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
+PE ++ SD+++ G ++ +L+ G
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 99 LGEGGFGTVHKGY---IDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL--RH 153
LGEG FG V ID D + +A VAVK+L + + L + + ++ +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD--KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 154 PHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKR--------------ISVSLPWGTRL 199
+++ L+G C +D ++ E+ +G+L +L R + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 200 KIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTR 259
A+G+ +L A I+RD N+L+ + K++DFGLA+ TT
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN 218
Query: 260 VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 97/208 (46%), Gaps = 26/208 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDI----EGLQGHREWLAEVIFLGQLR-- 152
+G G +GTV+K R VA+K + + EGL + EV L +L
Sbjct: 12 IGVGAYGTVYKA------RDPHSGHFVALKSVRVPNGEEGLP--ISTVREVALLRRLEAF 63
Query: 153 -HPHLVRLIGYCCE---DEE--RLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAA 206
HP++VRL+ C D E LV+E + + L +L K LP T +
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 207 KGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGY 266
+GL FLH N +++RD K NIL+ S T KL+DFGLA++ S V+ T Y
Sbjct: 123 RGLDFLHA--NCIVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALFPVVVTLWY 177
Query: 267 AAPEYISTGHLTTKSDVYSFGVVLLELL 294
APE + T D++S G + E+
Sbjct: 178 RAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW---LAEVIF 147
++F +LGEG F TV R+ ++ A+K+L+ + + E
Sbjct: 32 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 85
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
+ +L HP V+L +DE+ + G L ++ ++I TR A
Sbjct: 86 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 143
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L +LHG +I+RD K NILL+ D +++DFG AK+ S +GT Y
Sbjct: 144 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 201
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
+PE ++ SD+++ G ++ +L+ G
Sbjct: 202 SPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH-REWLA-EVIFLGQLRHPH 155
LG+GGF + D D ++ + V LL L+ H RE ++ E+ L H H
Sbjct: 22 FLGKGGFAKCFE-ISDADTKEVFAGKIVPKSLL----LKPHQREKMSMEISIHRSLAHQH 76
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
+V G+ +++ +V E R SL +R +++ P I G +LH
Sbjct: 77 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI--VLGCQYLH-- 132
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLA-KMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
N VI+RD K N+ L+ D K+ DFGLA K+ +G V + GT Y APE +S
Sbjct: 133 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAPEVLSK 189
Query: 275 GHLTTKSDVYSFGVVLLELLTGR 297
+ + DV+S G ++ LL G+
Sbjct: 190 KGHSFEVDVWSIGCIMYTLLVGK 212
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW---LAEVIF 147
++F +LGEG F TV R+ ++ A+K+L+ + + E
Sbjct: 35 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 88
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
+ +L HP V+L +DE+ + G L ++ ++I TR A
Sbjct: 89 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 146
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L +LHG +I+RD K NILL+ D +++DFG AK+ S +GT Y
Sbjct: 147 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 204
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
+PE ++ SD+++ G ++ +L+ G
Sbjct: 205 SPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 13/209 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW---LAEVIF 147
++F +LGEG F TV R+ ++ A+K+L+ + + E
Sbjct: 29 EDFKFGKILGEGSFSTVVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 82
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
+ +L HP V+L +DE+ + G L ++ ++I TR A
Sbjct: 83 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 140
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L +LHG +I+RD K NILL+ D +++DFG AK+ S +GT Y
Sbjct: 141 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 198
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
+PE ++ SD+++ G ++ +L+ G
Sbjct: 199 SPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 125/298 (41%), Gaps = 43/298 (14%)
Query: 99 LGEGGFGTVHKGYIDDD---LRQGLKAQAVAVKLLDIEGL--QGHREWLAEVIFLGQL-R 152
LG G FG V I+ D + + + VAVK+L EG HR ++E+ L +
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLK-EGATHSEHRALMSELKILIHIGH 80
Query: 153 HPHLVRLIGYCCEDEERLLVY-EFMPRGSLENHLFKRISVSLPWGTR------------- 198
H ++V L+G C + L+V EF G+L +L + + +P+
Sbjct: 81 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 199 -LKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVT 257
+ + AKG+ FL A I+RD NILL K+ DFGLA+ + +
Sbjct: 141 LICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 198
Query: 258 TRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKP 317
+ APE I T +SDV+SFGV+L E+ + S P + +
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS-----PYPGVKIDEEFCR 253
Query: 318 YLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
L+ R+R A Y+ EM L C P RP + +V L +LL
Sbjct: 254 RLKEGTRMR-------APDYT---TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 301
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 94/215 (43%), Gaps = 17/215 (7%)
Query: 87 RAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE---WLA 143
+ +F LLG+G FG V +R+ + A+K+L E + E +
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVIL------VREKATGRYYAMKILRKEVIIAKDEVAHTVT 59
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
E L RHP L L Y + +RL V E+ G L HL + +
Sbjct: 60 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 118
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +A L +LH + V+YRD K N++LD D K++DFGL K G S+ G
Sbjct: 119 IVSA--LEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGI--SDGATMKXFCG 172
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGR 297
T Y APE + D + GVV+ E++ GR
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 114/258 (44%), Gaps = 43/258 (16%)
Query: 91 QNFSSNYL-LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLG 149
+++ N++ +GEG G V + + VAVK +D+ Q EV+ +
Sbjct: 150 RSYLDNFIKIGEGSTGIVCIATVRSS------GKLVAVKKMDLRKQQRRELLFNEVVIMR 203
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLK------IAI 203
+H ++V + +E +V EF+ G+L + + TR+ + +
Sbjct: 204 DYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH---------TRMNEEQIAAVCL 254
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTR--VM 261
+ L+ LH VI+RD K+ +ILL D KLSDFG + V R ++
Sbjct: 255 AVLQALSVLHAQG--VIHRDIKSDSILLTHDGRVKLSDFGFCAQ----VSKEVPRRKXLV 308
Query: 262 GTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRS 321
GT + APE IS + D++S G++++E++ G + +P L++
Sbjct: 309 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY-------------FNEPPLKA 355
Query: 322 SRRLRYIVDPRLAGQYSV 339
+ +R + PRL + V
Sbjct: 356 MKMIRDNLPPRLKNLHKV 373
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 87 RAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE---WLA 143
+ +F LLG+G FG V +R+ + A+K+L E + E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVIL------VREKATGRYYAMKILRKEVIIAKDEVAHTVT 54
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
E L RHP L L Y + +RL V E+ G L HL R V R A
Sbjct: 55 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGA 112
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
L +LH + V+YRD K N++LD D K++DFGL K G S+ G
Sbjct: 113 -EIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGI--SDGATMKXFCG 167
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGR 297
T Y APE + D + GVV+ E++ GR
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 125/298 (41%), Gaps = 43/298 (14%)
Query: 99 LGEGGFGTVHKGYIDDD---LRQGLKAQAVAVKLLDIEGL--QGHREWLAEVIFLGQL-R 152
LG G FG V I+ D + + + VAVK+L EG HR ++E+ L +
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLK-EGATHSEHRALMSELKILIHIGH 80
Query: 153 HPHLVRLIGYCCEDEERLLVY-EFMPRGSLENHLFKRISVSLPWGTR------------- 198
H ++V L+G C + L+V EF G+L +L + + +P+
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 199 -LKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVT 257
+ + AKG+ FL A I+RD NILL K+ DFGLA+ + +
Sbjct: 141 LICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 198
Query: 258 TRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKP 317
+ APE I T +SDV+SFGV+L E+ + S P + +
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS-----PYPGVKIDEEFCR 253
Query: 318 YLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
L+ R+R A Y+ EM L C P RP + +V L +LL
Sbjct: 254 RLKEGTRMR-------APDYTT---PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 301
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 125/298 (41%), Gaps = 43/298 (14%)
Query: 99 LGEGGFGTVHKGYIDDD---LRQGLKAQAVAVKLLDIEGL--QGHREWLAEVIFLGQL-R 152
LG G FG V I+ D + + + VAVK+L EG HR ++E+ L +
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLK-EGATHSEHRALMSELKILIHIGH 89
Query: 153 HPHLVRLIGYCCEDEERLLV-YEFMPRGSLENHLFKRISVSLPWGTR------------- 198
H ++V L+G C + L+V EF G+L +L + + +P+
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 199 -LKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVT 257
+ + AKG+ FL A I+RD NILL K+ DFGLA+ + +
Sbjct: 150 LICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 258 TRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKP 317
+ APE I T +SDV+SFGV+L E+ + S P + +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS-----PYPGVKIDEEFCR 262
Query: 318 YLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
L+ R+R A Y+ EM L C P RP + +V L +LL
Sbjct: 263 RLKEGTRMR-------APDYT---TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 99 LGEGGFGTVHKGY---IDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL--RH 153
LGEG FG V ID D + +A VAVK+L + + L + + ++ +H
Sbjct: 89 LGEGCFGQVVMAEAVGIDKD--KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 146
Query: 154 PHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLK------------- 200
+++ L+G C +D ++ E+ +G+L +L R + + +
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 201 -IAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTR 259
A+G+ +L A I+RD N+L+ + K++DFGLA+ TT
Sbjct: 207 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 260 VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 13/226 (5%)
Query: 75 GPDLYDFQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEG 134
GP++ Q+ ++ N S +GEG +G V Y D+L K + K+ E
Sbjct: 14 GPEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAY--DNLN---KVRVAIKKISPFEH 65
Query: 135 LQGHREWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVS-L 193
+ L E+ L + RH +++ + + ++ + +E L+K + L
Sbjct: 66 QTYXQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL 125
Query: 194 PWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMG-PEGS 252
+GL ++H A V++RD K SN+LL++ K+ DFGLA++ P+
Sbjct: 126 SNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHD 183
Query: 253 NTHVTTRVMGTYGYAAPEYISTGHLTTKS-DVYSFGVVLLELLTGR 297
+T T + T Y APE + TKS D++S G +L E+L+ R
Sbjct: 184 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 94/215 (43%), Gaps = 17/215 (7%)
Query: 87 RAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE---WLA 143
+ +F LLG+G FG V +R+ + A+K+L E + E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVIL------VREKATGRYYAMKILRKEVIIAKDEVAHTVT 54
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
E L RHP L L Y + +RL V E+ G L HL + +
Sbjct: 55 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE 113
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +A L +LH + V+YRD K N++LD D K++DFGL K G S+ G
Sbjct: 114 IVSA--LEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGI--SDGATMKXFCG 167
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGR 297
T Y APE + D + GVV+ E++ GR
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 99 LGEGGFGTVHKGY---IDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL--RH 153
LGEG FG V ID D + +A VAVK+L + + L + + ++ +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD--KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 154 PHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLK------------- 200
+++ L+G C +D ++ E+ +G+L +L R + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 201 -IAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTR 259
A+G+ +L A I+RD N+L+ + K++DFGLA+ TT
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTN 218
Query: 260 VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 99 LGEGGFGTVHKGY---IDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL--RH 153
LGEG FG V ID D + +A VAVK+L + + L + + ++ +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD--KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 154 PHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLK------------- 200
+++ L+G C +D ++ E+ +G+L +L R + + +
Sbjct: 101 KNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 201 -IAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTR 259
A+G+ +L A I+RD N+L+ + K++DFGLA+ TT
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 260 VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 93/215 (43%), Gaps = 17/215 (7%)
Query: 87 RAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE---WLA 143
+ +F LLG+G FG V +R+ + A+K+L E + E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVIL------VREKATGRYYAMKILRKEVIIAKDEVAHTVT 54
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
E L RHP L L Y + +RL V E+ G L HL R V R A
Sbjct: 55 ESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHL-SRERVFTEERARFYGA 112
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
L +LH + V+YRD K N++LD D K++DFGL K G S+ G
Sbjct: 113 -EIVSALEYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCKEGI--SDGATMKXFCG 167
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGR 297
T Y APE + D + GVV+ E++ GR
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 105/220 (47%), Gaps = 27/220 (12%)
Query: 87 RAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQ--------GH 138
+A +F +LG+G FG V ++ + + A+K+L L+
Sbjct: 24 KADPSHFELLKVLGQGSFGKV---FLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKME 80
Query: 139 REWLAEVIFLGQLRHPHLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGT 197
R+ LA+V HP +V+L Y + E +L L+ +F+ G L L K + +
Sbjct: 81 RDILADV------NHPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFT---EE 130
Query: 198 RLKIAIGA-AKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHV 256
+K + A GL LH +IYRD K NILLD + KL+DFGL+K +
Sbjct: 131 DVKFYLAELALGLDHLHSL--GIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAY 188
Query: 257 TTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+ GT Y APE ++ + +D +S+GV++ E+LTG
Sbjct: 189 S--FCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG V G + VA+K++ EG E++ E + L H LV+
Sbjct: 32 LGTGQFGVVKYG-------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQ 83
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L G C + ++ E+M G L N+L + + L++ + + +L +
Sbjct: 84 LYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQ-- 140
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLT 278
++RD N L++ K+SDFGL++ + T ++ PE + +
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPV-RWSPPEVLMYSKFS 199
Query: 279 TKSDVYSFGVVLLELLT 295
+KSD+++FGV++ E+ +
Sbjct: 200 SKSDIWAFGVLMWEIYS 216
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 99 LGEGGFGTVHKGY---IDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL--RH 153
LGEG FG V ID D + +A VAVK+L + + L + + ++ +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD--KPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKH 100
Query: 154 PHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLK------------- 200
+++ L+G C +D ++ E+ +G+L +L R + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 201 -IAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTR 259
A+G+ +L A I+RD N+L+ + K++DFGLA+ TT
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 260 VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 120/292 (41%), Gaps = 41/292 (14%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLK-AQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLV 157
LGEGGF V DL +GL A+K + Q E E HP+++
Sbjct: 37 LGEGGFSYV-------DLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNIL 89
Query: 158 RLIGYCCED----EERLLVYEFMPRGSLENHL--FKRISVSLPWGTRLKIAIGAAKGLAF 211
RL+ YC + E L+ F RG+L N + K L L + +G +GL
Sbjct: 90 RLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEA 149
Query: 212 LHGAENPVIYRDFKTSNILLDSDFTAKLSDFG---LAKMGPEGSNTHVTTRVMG----TY 264
+H +RD K +NILL + L D G A + EGS +T + T
Sbjct: 150 IHA--KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 265 GYAAPEYISTGH---LTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRS 321
Y APE S + ++DV+S G VL ++ G D + K +
Sbjct: 208 SYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS------------ 255
Query: 322 SRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESL 373
+ V +L+ S + + + L ++V+P RP + +++ LE+L
Sbjct: 256 ---VALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEAL 304
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 13/226 (5%)
Query: 75 GPDLYDFQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEG 134
GP++ Q+ ++ N S +GEG +G V Y D+L K + K+ E
Sbjct: 14 GPEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAY--DNLN---KVRVAIKKISPFEH 65
Query: 135 LQGHREWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVS-L 193
+ L E+ L + RH +++ + + ++ + +E L+K + L
Sbjct: 66 QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHL 125
Query: 194 PWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMG-PEGS 252
+GL ++H A V++RD K SN+LL++ K+ DFGLA++ P+
Sbjct: 126 SNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 183
Query: 253 NTHVTTRVMGTYGYAAPEYISTGHLTTKS-DVYSFGVVLLELLTGR 297
+T T + T Y APE + TKS D++S G +L E+L+ R
Sbjct: 184 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 99 LGEGGFGTVHKGY---IDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL--RH 153
LGEG FG V ID D + +A VAVK+L + + L + + ++ +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD--KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 154 PHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLK------------- 200
+++ L+G C +D ++ E+ +G+L +L R + + +
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 201 -IAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTR 259
A+G+ +L A I+RD N+L+ + K++DFGLA+ TT
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 260 VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 13/226 (5%)
Query: 75 GPDLYDFQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEG 134
GP++ Q+ ++ N S +GEG +G V Y D+L K + K+ E
Sbjct: 14 GPEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAY--DNLN---KVRVAIKKISPFEH 65
Query: 135 LQGHREWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVS-L 193
+ L E+ L + RH +++ + + ++ + +E L+K + L
Sbjct: 66 QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL 125
Query: 194 PWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMG-PEGS 252
+GL ++H A V++RD K SN+LL++ K+ DFGLA++ P+
Sbjct: 126 SNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHD 183
Query: 253 NTHVTTRVMGTYGYAAPEYISTGHLTTKS-DVYSFGVVLLELLTGR 297
+T T + T Y APE + TKS D++S G +L E+L+ R
Sbjct: 184 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 123/308 (39%), Gaps = 66/308 (21%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+F L+G GGFG V K + + + ++ + + RE A L +L
Sbjct: 13 DFKEIELIGSGGFGQVFKA------KHRIDGKTYVIRRVKYNNEKAEREVKA----LAKL 62
Query: 152 RHPHLVRLIG--------------------YCCEDEER---------LLVYEFMPRGSLE 182
H ++V G Y E+ + + EF +G+LE
Sbjct: 63 DHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLE 122
Query: 183 NHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDF 242
+ KR L L++ KG+ ++H + +I+RD K SNI L K+ DF
Sbjct: 123 QWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK--LIHRDLKPSNIFLVDTKQVKIGDF 180
Query: 243 GLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDK 302
GL N TR GT Y +PE IS+ + D+Y+ G++L ELL
Sbjct: 181 GLV---TSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL-------- 229
Query: 303 LRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPK 362
++ D A +S ++ D R + KE +L + +S P+DRP
Sbjct: 230 -------HVCDTA---FETS---KFFTDLRDGIISDIFDKKEKTLLQ-KLLSKKPEDRPN 275
Query: 363 MAAVVATL 370
+ ++ TL
Sbjct: 276 TSEILRTL 283
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 125/298 (41%), Gaps = 43/298 (14%)
Query: 99 LGEGGFGTVHKGYIDDD---LRQGLKAQAVAVKLLDIEGL--QGHREWLAEVIFLGQL-R 152
LG G FG V I+ D + + + VAVK+L EG HR ++E+ L +
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLK-EGATHSEHRALMSELKILIHIGH 89
Query: 153 HPHLVRLIGYCCEDEERLLV-YEFMPRGSLENHLFKRISVSLPWGTR------------- 198
H ++V L+G C + L+V EF G+L +L + + +P+
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 199 -LKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVT 257
+ + AKG+ FL A I+RD NILL K+ DFGLA+ + +
Sbjct: 150 LICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRK 207
Query: 258 TRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKP 317
+ APE I T +SDV+SFGV+L E+ + S P + +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS-----PYPGVKIDEEFCR 262
Query: 318 YLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
L+ R+R A Y+ EM L C P RP + +V L +LL
Sbjct: 263 RLKEGTRMR-------APDYT---TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 13/226 (5%)
Query: 75 GPDLYDFQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEG 134
GP++ Q+ ++ N S +GEG +G V Y D+L K + K+ E
Sbjct: 15 GPEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAY--DNLN---KVRVAIKKISPFEH 66
Query: 135 LQGHREWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVS-L 193
+ L E+ L + RH +++ + + ++ + +E L+K + L
Sbjct: 67 QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL 126
Query: 194 PWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMG-PEGS 252
+GL ++H A V++RD K SN+LL++ K+ DFGLA++ P+
Sbjct: 127 SNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 184
Query: 253 NTHVTTRVMGTYGYAAPEYISTGHLTTKS-DVYSFGVVLLELLTGR 297
+T T + T Y APE + TKS D++S G +L E+L+ R
Sbjct: 185 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 13/226 (5%)
Query: 75 GPDLYDFQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEG 134
GP++ Q+ ++ N S +GEG +G V Y D+L K + K+ E
Sbjct: 16 GPEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAY--DNLN---KVRVAIKKISPFEH 67
Query: 135 LQGHREWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVS-L 193
+ L E+ L + RH +++ + + ++ + +E L+K + L
Sbjct: 68 QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL 127
Query: 194 PWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMG-PEGS 252
+GL ++H A V++RD K SN+LL++ K+ DFGLA++ P+
Sbjct: 128 SNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 185
Query: 253 NTHVTTRVMGTYGYAAPEYISTGHLTTKS-DVYSFGVVLLELLTGR 297
+T T + T Y APE + TKS D++S G +L E+L+ R
Sbjct: 186 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 13/226 (5%)
Query: 75 GPDLYDFQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEG 134
GP++ Q+ ++ N S +GEG +G V Y D+L K + K+ E
Sbjct: 7 GPEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAY--DNLN---KVRVAIKKISPFEH 58
Query: 135 LQGHREWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVS-L 193
+ L E+ L + RH +++ + + ++ + +E L+K + L
Sbjct: 59 QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL 118
Query: 194 PWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMG-PEGS 252
+GL ++H A V++RD K SN+LL++ K+ DFGLA++ P+
Sbjct: 119 SNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 176
Query: 253 NTHVTTRVMGTYGYAAPEYISTGHLTTKS-DVYSFGVVLLELLTGR 297
+T T + T Y APE + TKS D++S G +L E+L+ R
Sbjct: 177 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 13/226 (5%)
Query: 75 GPDLYDFQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEG 134
GP++ Q+ ++ N S +GEG +G V Y D+L K + K+ E
Sbjct: 14 GPEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAY--DNLN---KVRVAIKKISPFEH 65
Query: 135 LQGHREWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVS-L 193
+ L E+ L + RH +++ + + ++ + +E L+K + L
Sbjct: 66 QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL 125
Query: 194 PWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMG-PEGS 252
+GL ++H A V++RD K SN+LL++ K+ DFGLA++ P+
Sbjct: 126 SNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 183
Query: 253 NTHVTTRVMGTYGYAAPEYISTGHLTTKS-DVYSFGVVLLELLTGR 297
+T T + T Y APE + TKS D++S G +L E+L+ R
Sbjct: 184 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG V G + VA+K++ EG E++ E + L H LV+
Sbjct: 12 LGTGQFGVVKYG-------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQ 63
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L G C + ++ E+M G L N+L + + L++ + + +L +
Sbjct: 64 LYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQ-- 120
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLT 278
++RD N L++ K+SDFGL++ + T ++ PE + +
Sbjct: 121 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFS 179
Query: 279 TKSDVYSFGVVLLELLT 295
+KSD+++FGV++ E+ +
Sbjct: 180 SKSDIWAFGVLMWEIYS 196
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 13/226 (5%)
Query: 75 GPDLYDFQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEG 134
GP++ Q+ ++ N S +GEG +G V Y D+L K + K+ E
Sbjct: 8 GPEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAY--DNLN---KVRVAIKKISPFEH 59
Query: 135 LQGHREWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVS-L 193
+ L E+ L + RH +++ + + ++ + +E L+K + L
Sbjct: 60 QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL 119
Query: 194 PWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMG-PEGS 252
+GL ++H A V++RD K SN+LL++ K+ DFGLA++ P+
Sbjct: 120 SNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 177
Query: 253 NTHVTTRVMGTYGYAAPEYISTGHLTTKS-DVYSFGVVLLELLTGR 297
+T T + T Y APE + TKS D++S G +L E+L+ R
Sbjct: 178 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 13/226 (5%)
Query: 75 GPDLYDFQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEG 134
GP++ Q+ ++ N S +GEG +G V Y D+L K + K+ E
Sbjct: 14 GPEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAY--DNLN---KVRVAIRKISPFEH 65
Query: 135 LQGHREWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVS-L 193
+ L E+ L + RH +++ + + ++ + +E L+K + L
Sbjct: 66 QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL 125
Query: 194 PWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMG-PEGS 252
+GL ++H A V++RD K SN+LL++ K+ DFGLA++ P+
Sbjct: 126 SNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 183
Query: 253 NTHVTTRVMGTYGYAAPEYISTGHLTTKS-DVYSFGVVLLELLTGR 297
+T T + T Y APE + TKS D++S G +L E+L+ R
Sbjct: 184 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 13/226 (5%)
Query: 75 GPDLYDFQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEG 134
GP++ Q+ ++ N S +GEG +G V Y D+L K + K+ E
Sbjct: 8 GPEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAY--DNLN---KVRVAIKKISPFEH 59
Query: 135 LQGHREWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVS-L 193
+ L E+ L + RH +++ + + ++ + +E L+K + L
Sbjct: 60 QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL 119
Query: 194 PWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMG-PEGS 252
+GL ++H A V++RD K SN+LL++ K+ DFGLA++ P+
Sbjct: 120 SNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 177
Query: 253 NTHVTTRVMGTYGYAAPEYISTGHLTTKS-DVYSFGVVLLELLTGR 297
+T T + T Y APE + TKS D++S G +L E+L+ R
Sbjct: 178 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 99 LGEGGFGTVHKGY---IDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL--RH 153
LGEG FG V ID D + +A VAVK+L + + L + + ++ +H
Sbjct: 30 LGEGCFGQVVMAEAVGIDKD--KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 87
Query: 154 PHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLK------------- 200
+++ L+G C +D ++ E+ +G+L +L R + + +
Sbjct: 88 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 147
Query: 201 -IAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTR 259
A+G+ +L A I+RD N+L+ + K++DFGLA+ TT
Sbjct: 148 SCTYQLARGMEYL--ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 205
Query: 260 VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 206 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 125/298 (41%), Gaps = 43/298 (14%)
Query: 99 LGEGGFGTVHKGYIDDD---LRQGLKAQAVAVKLLDIEGL--QGHREWLAEVIFLGQL-R 152
LG G FG V I+ D + + + VAVK+L EG HR ++E+ L +
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLK-EGATHSEHRALMSELKILIHIGH 80
Query: 153 HPHLVRLIGYCCEDEERLLVY-EFMPRGSLENHLFKRISVSLPWGTR------------- 198
H ++V L+G C + L+V EF G+L +L + + +P+
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 199 -LKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVT 257
+ + AKG+ FL A I+RD NILL K+ DFGLA+ + +
Sbjct: 141 LICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 198
Query: 258 TRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKP 317
+ APE I T +SDV+SFGV+L E+ + S P + +
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS-----PYPGVKIDEEFCR 253
Query: 318 YLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
L+ R+R A Y+ EM L C P RP + +V L +LL
Sbjct: 254 RLKEGTRMR-------APDYTT---PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 301
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH-REWLA-EVIFLGQLRHPH 155
LG+GGF + D D ++ + V LL L+ H RE ++ E+ L H H
Sbjct: 28 FLGKGGFAKCFE-ISDADTKEVFAGKIVPKSLL----LKPHQREKMSMEISIHRSLAHQH 82
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
+V G+ +++ +V E R SL +R +++ P I G +LH
Sbjct: 83 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI--VLGCQYLH-- 138
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLA-KMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
N VI+RD K N+ L+ D K+ DFGLA K+ +G + GT Y APE +S
Sbjct: 139 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNYIAPEVLSK 195
Query: 275 GHLTTKSDVYSFGVVLLELLTGR 297
+ + DV+S G ++ LL G+
Sbjct: 196 KGHSFEVDVWSIGCIMYTLLVGK 218
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 125/298 (41%), Gaps = 43/298 (14%)
Query: 99 LGEGGFGTVHKGYIDDD---LRQGLKAQAVAVKLLDIEGL--QGHREWLAEVIFLGQL-R 152
LG G FG V I+ D + + + VAVK+L EG HR ++E+ L +
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLK-EGATHSEHRALMSELKILIHIGH 80
Query: 153 HPHLVRLIGYCCEDEERLLVY-EFMPRGSLENHLFKRISVSLPWGTR------------- 198
H ++V L+G C + L+V EF G+L +L + + +P+
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 199 -LKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVT 257
+ + AKG+ FL A I+RD NILL K+ DFGLA+ + +
Sbjct: 141 LICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 198
Query: 258 TRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKP 317
+ APE I T +SDV+SFGV+L E+ + S P + +
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS-----PYPGVKIDEEFCR 253
Query: 318 YLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
L+ R+R A Y+ EM L C P RP + +V L +LL
Sbjct: 254 RLKEGTRMR-------APDYTT---PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 301
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG V G + VA+K++ EG E++ E + L H LV+
Sbjct: 16 LGTGQFGVVKYG-------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQ 67
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L G C + ++ E+M G L N+L + + L++ + + +L +
Sbjct: 68 LYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQ-- 124
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLT 278
++RD N L++ K+SDFGL++ + T ++ PE + +
Sbjct: 125 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFS 183
Query: 279 TKSDVYSFGVVLLELLT 295
+KSD+++FGV++ E+ +
Sbjct: 184 SKSDIWAFGVLMWEIYS 200
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 99 LGEGGFGTVHKGY---IDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL--RH 153
LGEG FG V ID D + +A VAVK+L + + L + + ++ +H
Sbjct: 35 LGEGCFGQVVMAEAVGIDKD--KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 92
Query: 154 PHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLK------------- 200
+++ L+G C +D ++ E+ +G+L +L R + + +
Sbjct: 93 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 152
Query: 201 -IAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTR 259
A+G+ +L A I+RD N+L+ + K++DFGLA+ TT
Sbjct: 153 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 210
Query: 260 VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 211 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH-REWLA-EVIFLGQLRHPH 155
LG+GGF + D D ++ + V LL L+ H RE ++ E+ L H H
Sbjct: 24 FLGKGGFAKCFE-ISDADTKEVFAGKIVPKSLL----LKPHQREKMSMEISIHRSLAHQH 78
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
+V G+ +++ +V E R SL +R +++ P I G +LH
Sbjct: 79 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI--VLGCQYLH-- 134
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLA-KMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
N VI+RD K N+ L+ D K+ DFGLA K+ +G + GT Y APE +S
Sbjct: 135 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNYIAPEVLSK 191
Query: 275 GHLTTKSDVYSFGVVLLELLTGR 297
+ + DV+S G ++ LL G+
Sbjct: 192 KGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 99 LGEGGFGTVHKGY---IDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL--RH 153
LGEG FG V ID D + +A VAVK+L + + L + + ++ +H
Sbjct: 32 LGEGCFGQVVMAEAVGIDKD--KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 89
Query: 154 PHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLK------------- 200
+++ L+G C +D ++ E+ +G+L +L R + + +
Sbjct: 90 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 149
Query: 201 -IAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTR 259
A+G+ +L A I+RD N+L+ + K++DFGLA+ TT
Sbjct: 150 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 207
Query: 260 VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 208 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG V G + VA+K++ EG E++ E + L H LV+
Sbjct: 32 LGTGQFGVVKYG-------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQ 83
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L G C + ++ E+M G L N+L + + L++ + + +L +
Sbjct: 84 LYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQ-- 140
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLT 278
++RD N L++ K+SDFGL++ + T ++ PE + +
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFS 199
Query: 279 TKSDVYSFGVVLLELLT 295
+KSD+++FGV++ E+ +
Sbjct: 200 SKSDIWAFGVLMWEIYS 216
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 115/257 (44%), Gaps = 41/257 (15%)
Query: 91 QNFSSNYL-LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLG 149
+++ N++ +GEG G V + + VAVK +D+ Q EV+ +
Sbjct: 28 RSYLDNFIKIGEGSTGIVCIATVRS------SGKLVAVKKMDLRKQQRRELLFNEVVIMR 81
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLK------IAI 203
+H ++V + +E +V EF+ G+L + + TR+ + +
Sbjct: 82 DYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH---------TRMNEEQIAAVCL 132
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGL-AKMGPEGSNTHVTTRVMG 262
+ L+ LH VI+RD K+ +ILL D KLSDFG A++ E ++G
Sbjct: 133 AVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR---RKXLVG 187
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSS 322
T + APE IS + D++S G++++E++ G + +P L++
Sbjct: 188 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY-------------FNEPPLKAM 234
Query: 323 RRLRYIVDPRLAGQYSV 339
+ +R + PRL + V
Sbjct: 235 KMIRDNLPPRLKNLHKV 251
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 90/209 (43%), Gaps = 19/209 (9%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWLAEVIFL 148
+F LG+G FG V+ R+ VA+K+L IE + E+
Sbjct: 24 DFEIGRPLGKGKFGNVYLA------REKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQ 77
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
L HP+++RL Y + L+ E+ PRG L L K S + I A
Sbjct: 78 AHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQK--SCTFDEQRTATIMEELADA 135
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVM-GTYGYA 267
L + HG + VI+RD K N+LL K++DFG + P + + M GT Y
Sbjct: 136 LMYCHGKK--VIHRDIKPENLLLGLKGELKIADFGWSVHAPS-----LRRKTMCGTLDYL 188
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
PE I K D++ GV+ ELL G
Sbjct: 189 PPEMIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 125/298 (41%), Gaps = 43/298 (14%)
Query: 99 LGEGGFGTVHKGYIDDD---LRQGLKAQAVAVKLLDIEGL--QGHREWLAEVIFLGQL-R 152
LG G FG V I+ D + + + VAVK+L EG HR ++E+ L +
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLK-EGATHSEHRALMSELKILIHIGH 89
Query: 153 HPHLVRLIGYCCEDEERLLVY-EFMPRGSLENHLFKRISVSLPWGTR------------- 198
H ++V L+G C + L+V EF G+L +L + + +P+
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 199 -LKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVT 257
+ + AKG+ FL A I+RD NILL K+ DFGLA+ + +
Sbjct: 150 LICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 207
Query: 258 TRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKP 317
+ APE I T +SDV+SFGV+L E+ + S P + +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS-----PYPGVKIDEEFCR 262
Query: 318 YLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
L+ R+R A Y+ EM L C P RP + +V L +LL
Sbjct: 263 RLKEGTRMR-------APDYT---TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG V G + VA+K++ EG E++ E + L H LV+
Sbjct: 17 LGTGQFGVVKYG-------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQ 68
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L G C + ++ E+M G L N+L + + L++ + + +L +
Sbjct: 69 LYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQ-- 125
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLT 278
++RD N L++ K+SDFGL++ + T ++ PE + +
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFS 184
Query: 279 TKSDVYSFGVVLLELLT 295
+KSD+++FGV++ E+ +
Sbjct: 185 SKSDIWAFGVLMWEIYS 201
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 115/257 (44%), Gaps = 41/257 (15%)
Query: 91 QNFSSNYL-LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLG 149
+++ N++ +GEG G V + + VAVK +D+ Q EV+ +
Sbjct: 30 RSYLDNFIKIGEGSTGIVCIATVRS------SGKLVAVKKMDLRKQQRRELLFNEVVIMR 83
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLK------IAI 203
+H ++V + +E +V EF+ G+L + + TR+ + +
Sbjct: 84 DYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH---------TRMNEEQIAAVCL 134
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGL-AKMGPEGSNTHVTTRVMG 262
+ L+ LH VI+RD K+ +ILL D KLSDFG A++ E ++G
Sbjct: 135 AVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR---RKXLVG 189
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSS 322
T + APE IS + D++S G++++E++ G + +P L++
Sbjct: 190 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY-------------FNEPPLKAM 236
Query: 323 RRLRYIVDPRLAGQYSV 339
+ +R + PRL + V
Sbjct: 237 KMIRDNLPPRLKNLHKV 253
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 13/209 (6%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREW---LAEVIF 147
++F +LGEG F T R+ ++ A+K+L+ + + E
Sbjct: 30 EDFKFGKILGEGSFSTTVLA------RELATSREYAIKILEKRHIIKENKVPYVTRERDV 83
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
+ +L HP V+L +DE+ + G L ++ ++I TR A
Sbjct: 84 MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTA-EIVS 141
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
L +LHG +I+RD K NILL+ D +++DFG AK+ S +GT Y
Sbjct: 142 ALEYLHG--KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 199
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
+PE ++ SD+++ G ++ +L+ G
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 99 LGEGGFGTVHKGY---IDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL--RH 153
LGEG FG V ID D + +A VAVK+L + + L + + ++ +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD--KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 154 PHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLK------------- 200
+++ L+G C +D ++ E+ +G+L +L R + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 201 -IAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTR 259
A+G+ +L A I+RD N+L+ + +++DFGLA+ TT
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTN 218
Query: 260 VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 24/216 (11%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V+K + A K+++ + + +++ E+ L HP++V+
Sbjct: 27 LGDGAFGKVYKA------KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWG-TRLKIAI---GAAKGLAFLHG 214
L+G D + ++ EF P G+++ I + L G T +I + + L FLH
Sbjct: 81 LLGAYYHDGKLWIMIEFCPGGAVDA-----IMLELDRGLTEPQIQVVCRQMLEALNFLHS 135
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+I+RD K N+L+ + +L+DFG++ +GT + APE +
Sbjct: 136 KR--IIHRDLKAGNVLMTLEGDIRLADFGVS--AKNLKTLQKRDSFIGTPYWMAPEVVMC 191
Query: 275 GHLTT-----KSDVYSFGVVLLELLTGRRSMDKLRP 305
+ K+D++S G+ L+E+ +L P
Sbjct: 192 ETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP 227
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 97/223 (43%), Gaps = 32/223 (14%)
Query: 87 RAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---------DIEGLQG 137
R NF +LG+G FG V + + AVK+L D+E
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKE------TGDLYAVKVLKKDVILQDDDVECTMT 72
Query: 138 HREWLAEVIFLGQLRHPHLVRLIGYCC-EDEERLL-VYEFMPRGSLENHLFKRISVSLPW 195
+ L+ L + HP L +L +CC + +RL V EF+ G L H+ K S
Sbjct: 73 EKRILS----LAR-NHPFLTQL--FCCFQTPDRLFFVMEFVNGGDLMFHIQK--SRRFDE 123
Query: 196 GTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTH 255
A L FLH + +IYRD K N+LLD + KL+DFG+ K EG
Sbjct: 124 ARARFYAAEIISALMFLH--DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK---EGICNG 178
Query: 256 VTTRVM-GTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGR 297
VTT GT Y APE + D ++ GV+L E+L G
Sbjct: 179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGH 221
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 115/238 (48%), Gaps = 27/238 (11%)
Query: 70 LAHTFGPDLYDFQLSE-LRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK 128
++H P Y +L++ + + + + + +G G +G+V Y D++ GLK +AVK
Sbjct: 29 MSHKERPTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSY---DVKSGLK---IAVK 82
Query: 129 LLD--IEGLQGHREWLAEVIFLGQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGS 180
L + + + E+ L ++H +++ L+ E + LV M G+
Sbjct: 83 KLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLM--GA 140
Query: 181 LENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLS 240
N++ K ++ L I +GL ++H A+ +I+RD K SN+ ++ D K+
Sbjct: 141 DLNNIVKCQKLTDDHVQFLIYQI--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKIL 196
Query: 241 DFGLAKMGPEGSNTHVTTRVMGTYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
DFGLA+ + +V TR Y APE ++ H D++S G ++ ELLTGR
Sbjct: 197 DFGLARHTDDEMTGYVATR-----WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 24/216 (11%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG+G FG V+K + A K+++ + + +++ E+ L HP++V+
Sbjct: 19 LGDGAFGKVYKA------KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 72
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWG-TRLKIAI---GAAKGLAFLHG 214
L+G D + ++ EF P G+++ I + L G T +I + + L FLH
Sbjct: 73 LLGAYYHDGKLWIMIEFCPGGAVD-----AIMLELDRGLTEPQIQVVCRQMLEALNFLHS 127
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+I+RD K N+L+ + +L+DFG++ +GT + APE +
Sbjct: 128 KR--IIHRDLKAGNVLMTLEGDIRLADFGVS--AKNLKTLQKRDSFIGTPYWMAPEVVMC 183
Query: 275 GHLTT-----KSDVYSFGVVLLELLTGRRSMDKLRP 305
+ K+D++S G+ L+E+ +L P
Sbjct: 184 ETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP 219
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH-REWLA-EVIFLGQLRHPH 155
LG+GGF + D D ++ + V LL L+ H RE ++ E+ L H H
Sbjct: 24 FLGKGGFAKCFE-ISDADTKEVFAGKIVPKSLL----LKPHQREKMSMEISIHRSLAHQH 78
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
+V G+ +++ +V E R SL +R +++ P I G +LH
Sbjct: 79 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI--VLGCQYLH-- 134
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLA-KMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
N VI+RD K N+ L+ D K+ DFGLA K+ +G + GT Y APE +S
Sbjct: 135 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPNYIAPEVLSK 191
Query: 275 GHLTTKSDVYSFGVVLLELLTGR 297
+ + DV+S G ++ LL G+
Sbjct: 192 KGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 114/258 (44%), Gaps = 43/258 (16%)
Query: 91 QNFSSNYL-LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLG 149
+++ N++ +GEG G V + + VAVK +D+ Q EV+ +
Sbjct: 73 RSYLDNFIKIGEGSTGIVCIATVRSS------GKLVAVKKMDLRKQQRRELLFNEVVIMR 126
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLK------IAI 203
+H ++V + +E +V EF+ G+L + + TR+ + +
Sbjct: 127 DYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH---------TRMNEEQIAAVCL 177
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTR--VM 261
+ L+ LH VI+RD K+ +ILL D KLSDFG + V R ++
Sbjct: 178 AVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQ----VSKEVPRRKXLV 231
Query: 262 GTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRS 321
GT + APE IS + D++S G++++E++ G + +P L++
Sbjct: 232 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY-------------FNEPPLKA 278
Query: 322 SRRLRYIVDPRLAGQYSV 339
+ +R + PRL + V
Sbjct: 279 MKMIRDNLPPRLKNLHKV 296
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 125/298 (41%), Gaps = 43/298 (14%)
Query: 99 LGEGGFGTVHKGYIDDD---LRQGLKAQAVAVKLLDIEGL--QGHREWLAEVIFLGQL-R 152
LG G FG V I+ D + + + VAVK+L EG HR ++E+ L +
Sbjct: 72 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLK-EGATHSEHRALMSELKILIHIGH 126
Query: 153 HPHLVRLIGYCCEDEERLLV-YEFMPRGSLENHLFKRISVSLPWGTR------------- 198
H ++V L+G C + L+V EF G+L +L + + +P+
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 186
Query: 199 -LKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVT 257
+ + AKG+ FL A I+RD NILL K+ DFGLA+ + +
Sbjct: 187 LICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 244
Query: 258 TRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKP 317
+ APE I T +SDV+SFGV+L E+ + S P + +
Sbjct: 245 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS-----PYPGVKIDEEFCR 299
Query: 318 YLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
L+ R+R A Y+ EM L C P RP + +V L +LL
Sbjct: 300 RLKEGTRMR-------APDYT---TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG V G + VA+K++ EG E++ E + L H LV+
Sbjct: 17 LGTGQFGVVKYG-------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQ 68
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L G C + ++ E+M G L N+L + + L++ + + +L +
Sbjct: 69 LYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQ-- 125
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLT 278
++RD N L++ K+SDFGL++ + T ++ PE + +
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPV-RWSPPEVLMYSKFS 184
Query: 279 TKSDVYSFGVVLLELLT 295
+KSD+++FGV++ E+ +
Sbjct: 185 SKSDIWAFGVLMWEIYS 201
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 125/298 (41%), Gaps = 43/298 (14%)
Query: 99 LGEGGFGTVHKGYIDDD---LRQGLKAQAVAVKLLDIEGL--QGHREWLAEVIFLGQL-R 152
LG G FG V I+ D + + + VAVK+L EG HR ++E+ L +
Sbjct: 37 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLK-EGATHSEHRALMSELKILIHIGH 91
Query: 153 HPHLVRLIGYCCEDEERLLVY-EFMPRGSLENHLFKRISVSLPWGTR------------- 198
H ++V L+G C + L+V EF G+L +L + + +P+
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEH 151
Query: 199 -LKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVT 257
+ + AKG+ FL A I+RD NILL K+ DFGLA+ + +
Sbjct: 152 LICYSFQVAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 209
Query: 258 TRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKP 317
+ APE I T +SDV+SFGV+L E+ + S P + +
Sbjct: 210 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS-----PYPGVKIDEEFCR 264
Query: 318 YLRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
L+ R+R A Y+ EM L C P RP + +V L +LL
Sbjct: 265 RLKEGTRMR-------APDYTT---PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 312
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 115/257 (44%), Gaps = 41/257 (15%)
Query: 91 QNFSSNYL-LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLG 149
+++ N++ +GEG G V + + VAVK +D+ Q EV+ +
Sbjct: 19 RSYLDNFIKIGEGSTGIVCIATVRS------SGKLVAVKKMDLRKQQRRELLFNEVVIMR 72
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLK------IAI 203
+H ++V + +E +V EF+ G+L + + TR+ + +
Sbjct: 73 DYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTH---------TRMNEEQIAAVCL 123
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGL-AKMGPEGSNTHVTTRVMG 262
+ L+ LH VI+RD K+ +ILL D KLSDFG A++ E ++G
Sbjct: 124 AVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR---RKXLVG 178
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSS 322
T + APE IS + D++S G++++E++ G + +P L++
Sbjct: 179 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY-------------FNEPPLKAM 225
Query: 323 RRLRYIVDPRLAGQYSV 339
+ +R + PRL + V
Sbjct: 226 KMIRDNLPPRLKNLHKV 242
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG V G + VA+K++ EG E++ E + L H LV+
Sbjct: 23 LGTGQFGVVKYG-------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQ 74
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L G C + ++ E+M G L N+L + + L++ + + +L +
Sbjct: 75 LYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQ-- 131
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLT 278
++RD N L++ K+SDFGL++ + T ++ PE + +
Sbjct: 132 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPV-RWSPPEVLMYSKFS 190
Query: 279 TKSDVYSFGVVLLELLT 295
+KSD+++FGV++ E+ +
Sbjct: 191 SKSDIWAFGVLMWEIYS 207
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAV--AVKLLDIEGLQGHRE---WLAE-VIFLGQL 151
++G+G FG V L KA+ V AVK+L + + +E ++E + L +
Sbjct: 45 VIGKGSFGKV--------LLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV 96
Query: 152 RHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAF 211
+HP LV L ++ V +++ G L HL + P I +A L +
Sbjct: 97 KHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASA--LGY 154
Query: 212 LHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEY 271
LH ++YRD K NILLDS L+DFGL K E ++T T+ GT Y APE
Sbjct: 155 LHSLN--IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST--TSTFCGTPEYLAPEV 210
Query: 272 ISTGHLTTKSDVYSFGVVLLELLTG 296
+ D + G VL E+L G
Sbjct: 211 LHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG VH+ + + A K + E+ + LRHP LV
Sbjct: 59 LGTGAFGVVHR------VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVN 112
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVS---LPWGTRLKIAIGAAKGLAFLHGA 215
L +D E +++YEFM G LF++++ + ++ KGL +H
Sbjct: 113 LHDAFEDDNEMVMIYEFMSGGE----LFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH-- 166
Query: 216 ENPVIYRDFKTSNILLDSDFTA--KLSDFGL-AKMGPEGSNTHVTTRVMGTYGYAAPEYI 272
EN ++ D K NI+ + + KL DFGL A + P+ S VTT GT +AAPE
Sbjct: 167 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS-VKVTT---GTAEFAAPEVA 222
Query: 273 STGHLTTKSDVYSFGVVLLELLTG 296
+ +D++S GV+ LL+G
Sbjct: 223 EGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 115/257 (44%), Gaps = 41/257 (15%)
Query: 91 QNFSSNYL-LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLG 149
+++ N++ +GEG G V + + VAVK +D+ Q EV+ +
Sbjct: 23 RSYLDNFIKIGEGSTGIVCIATVRS------SGKLVAVKKMDLRKQQRRELLFNEVVIMR 76
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLK------IAI 203
+H ++V + +E +V EF+ G+L + + TR+ + +
Sbjct: 77 DYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD---------IVTHTRMNEEQIAAVCL 127
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGL-AKMGPEGSNTHVTTRVMG 262
+ L+ LH VI+RD K+ +ILL D KLSDFG A++ E ++G
Sbjct: 128 AVLQALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR---RKXLVG 182
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSS 322
T + APE IS + D++S G++++E++ G + +P L++
Sbjct: 183 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY-------------FNEPPLKAM 229
Query: 323 RRLRYIVDPRLAGQYSV 339
+ +R + PRL + V
Sbjct: 230 KMIRDNLPPRLKNLHKV 246
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLA-EVIFLGQLRHPHL 156
+LG G F V + +D R + VA+K + E L+G + E+ L +++HP++
Sbjct: 25 VLGTGAFSEV---ILAEDKRT---QKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
V L L+ + + G L + + ++ + +RL + A + +LH +
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYLH--D 134
Query: 217 NPVIYRDFKTSNIL---LDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIS 273
+++RD K N+L LD D +SDFGL+KM GS V + GT GY APE ++
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVAPEVLA 191
Query: 274 TGHLTTKSDVYSFGVVLLELLTG 296
+ D +S GV+ LL G
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG VH+ + + A K + E+ + LRHP LV
Sbjct: 165 LGTGAFGVVHR------VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVN 218
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVS---LPWGTRLKIAIGAAKGLAFLHGA 215
L +D E +++YEFM G LF++++ + ++ KGL +H
Sbjct: 219 LHDAFEDDNEMVMIYEFMSGGE----LFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH-- 272
Query: 216 ENPVIYRDFKTSNILLDSDFTA--KLSDFGL-AKMGPEGSNTHVTTRVMGTYGYAAPEYI 272
EN ++ D K NI+ + + KL DFGL A + P+ S VTT GT +AAPE
Sbjct: 273 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS-VKVTT---GTAEFAAPEVA 328
Query: 273 STGHLTTKSDVYSFGVVLLELLTG 296
+ +D++S GV+ LL+G
Sbjct: 329 EGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 96/226 (42%), Gaps = 23/226 (10%)
Query: 82 QLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL-----DIEGLQ 136
++ + + +F LG+G FG V+ R+ +A+K+L + EG++
Sbjct: 6 EMPKRKFTIDDFDIGRPLGKGKFGNVYLA------REKQNKFIMALKVLFKSQLEKEGVE 59
Query: 137 GHREWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWG 196
+ E+ LRHP+++R+ Y + + L+ EF PRG L L K
Sbjct: 60 --HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRS 117
Query: 197 TRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHV 256
+ A L + H E VI+RD K N+L+ K++DFG + P +
Sbjct: 118 ATFMEEL--ADALHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----L 168
Query: 257 TTRVM-GTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMD 301
R M GT Y PE I K D++ GV+ E L G D
Sbjct: 169 RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 98/214 (45%), Gaps = 24/214 (11%)
Query: 92 NFSSNYLLGEGGFGTV---HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLA---EV 145
+F+ +LG+G FG V + D+ + + V ++ D+E + LA +
Sbjct: 342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 401
Query: 146 IFLGQLRHPHLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIG 204
FL QL C + +RL V E++ G L H+ + P I
Sbjct: 402 PFLTQLHS---------CFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEI- 451
Query: 205 AAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVM-GT 263
A GL FL +IYRD K N++LDS+ K++DFG+ K E VTT+ GT
Sbjct: 452 -AIGLFFLQS--KGIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGT 505
Query: 264 YGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE I+ D ++FGV+L E+L G+
Sbjct: 506 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 96/226 (42%), Gaps = 23/226 (10%)
Query: 82 QLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL-----DIEGLQ 136
++ + + +F LG+G FG V+ R+ +A+K+L + EG++
Sbjct: 5 EMPKRKFTIDDFDIGRPLGKGKFGNVYLA------REKQNKFIMALKVLFKSQLEKEGVE 58
Query: 137 GHREWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWG 196
+ E+ LRHP+++R+ Y + + L+ EF PRG L L K
Sbjct: 59 --HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRS 116
Query: 197 TRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHV 256
+ A L + H E VI+RD K N+L+ K++DFG + P +
Sbjct: 117 ATFMEEL--ADALHYCH--ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----L 167
Query: 257 TTRVM-GTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMD 301
R M GT Y PE I K D++ GV+ E L G D
Sbjct: 168 RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLA-EVIFLGQLRHPHL 156
+LG G F V + +D R + VA+K + E L+G + E+ L +++HP++
Sbjct: 25 VLGTGAFSEV---ILAEDKRT---QKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
V L L+ + + G L + + ++ + +RL + A + +LH +
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYLH--D 134
Query: 217 NPVIYRDFKTSNIL---LDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIS 273
+++RD K N+L LD D +SDFGL+KM GS V + GT GY APE ++
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVAPEVLA 191
Query: 274 TGHLTTKSDVYSFGVVLLELLTG 296
+ D +S GV+ LL G
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 105/235 (44%), Gaps = 37/235 (15%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD---IEGLQGHREWLAEVIFL 148
+FS + ++G GGFG V+ R+ + A+K LD I+ QG L E I L
Sbjct: 190 DFSVHRIIGRGGFGEVY------GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 149 GQLRH---PHLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIG 204
+ P +V + Y ++L + + M G L HL + S +
Sbjct: 244 SLVSTGDCPFIV-CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS-----EADMRFY 297
Query: 205 AAK---GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLA----KMGPEGSNTHVT 257
AA+ GL +H V+YRD K +NILLD ++SD GLA K P S
Sbjct: 298 AAEIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----- 350
Query: 258 TRVMGTYGYAAPEYISTG-HLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNL 311
+GT+GY APE + G + +D +S G +L +LL G + + K + +
Sbjct: 351 ---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+GEG +G V Y D++ K + K+ E + L E+ L + RH +++
Sbjct: 31 IGEGAYGMVCSAY--DNVN---KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 85
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVS-LPWGTRLKIAIGAAKGLAFLHGAEN 217
+ + ++ + +E L+K + L +GL ++H A
Sbjct: 86 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN- 144
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMG-PEGSNTHVTTRVMGTYGYAAPEYISTGH 276
V++RD K SN+LL++ K+ DFGLA++ P+ +T T + T Y APE +
Sbjct: 145 -VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 277 LTTKS-DVYSFGVVLLELLTGR 297
TKS D++S G +L E+L+ R
Sbjct: 204 GYTKSIDIWSVGCILAEMLSNR 225
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 105/235 (44%), Gaps = 37/235 (15%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD---IEGLQGHREWLAEVIFL 148
+FS + ++G GGFG V+ R+ + A+K LD I+ QG L E I L
Sbjct: 189 DFSVHRIIGRGGFGEVY------GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 242
Query: 149 GQLRH---PHLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIG 204
+ P +V + Y ++L + + M G L HL + S +
Sbjct: 243 SLVSTGDCPFIV-CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS-----EADMRFY 296
Query: 205 AAK---GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLA----KMGPEGSNTHVT 257
AA+ GL +H V+YRD K +NILLD ++SD GLA K P S
Sbjct: 297 AAEIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----- 349
Query: 258 TRVMGTYGYAAPEYISTG-HLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNL 311
+GT+GY APE + G + +D +S G +L +LL G + + K + +
Sbjct: 350 ---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 401
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 100/227 (44%), Gaps = 47/227 (20%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAE--VIFLGQLRHPH 155
L+G G +G V+KG +D+ + VAVK+ Q ++ E + + + H +
Sbjct: 20 LIGRGRYGAVYKGSLDE--------RPVAVKVFSFANRQN---FINEKNIYRVPLMEHDN 68
Query: 156 LVRLIGYCCEDE--------ERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK 207
+ R I DE E LLV E+ P GSL +L S W + ++A +
Sbjct: 69 IARFI---VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS---DWVSSCRLAHSVTR 122
Query: 208 GLAFLHGA------ENPVI-YRDFKTSNILLDSDFTAKLSDFGLA------KMGPEGSNT 254
GLA+LH P I +RD + N+L+ +D T +SDFGL+ ++ G
Sbjct: 123 GLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEED 182
Query: 255 HVTTRVMGTYGYAAPEYISTG-------HLTTKSDVYSFGVVLLELL 294
+ +GT Y APE + + D+Y+ G++ E+
Sbjct: 183 NAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+GEG +G V Y D++ K + K+ E + L E+ L + RH +++
Sbjct: 31 IGEGAYGMVCSAY--DNVN---KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 85
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVS-LPWGTRLKIAIGAAKGLAFLHGAEN 217
+ + ++ + +E L+K + L +GL ++H A
Sbjct: 86 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN- 144
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMG-PEGSNTHVTTRVMGTYGYAAPEYISTGH 276
V++RD K SN+LL++ K+ DFGLA++ P+ +T T + T Y APE +
Sbjct: 145 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 277 LTTKS-DVYSFGVVLLELLTGR 297
TKS D++S G +L E+L+ R
Sbjct: 204 GYTKSIDIWSVGCILAEMLSNR 225
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 90/209 (43%), Gaps = 23/209 (11%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL-----DIEGLQGHREWLAEVIFLGQLRH 153
LG+G FG V+ R+ +A+K+L + EG++ + E+ LRH
Sbjct: 22 LGKGKFGNVYLA------REKQNKFIMALKVLFKSQLEKEGVE--HQLRREIEIQSHLRH 73
Query: 154 PHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLH 213
P+++R+ Y + + L+ EF PRG L L K + A L + H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL--ADALHYCH 131
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVM-GTYGYAAPEYI 272
E VI+RD K N+L+ K++DFG + P + R M GT Y PE I
Sbjct: 132 --ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMI 184
Query: 273 STGHLTTKSDVYSFGVVLLELLTGRRSMD 301
K D++ GV+ E L G D
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 105/235 (44%), Gaps = 37/235 (15%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD---IEGLQGHREWLAEVIFL 148
+FS + ++G GGFG V+ R+ + A+K LD I+ QG L E I L
Sbjct: 190 DFSVHRIIGRGGFGEVY------GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 149 GQLRH---PHLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIG 204
+ P +V + Y ++L + + M G L HL + S +
Sbjct: 244 SLVSTGDCPFIV-CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS-----EADMRFY 297
Query: 205 AAK---GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLA----KMGPEGSNTHVT 257
AA+ GL +H V+YRD K +NILLD ++SD GLA K P S
Sbjct: 298 AAEIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----- 350
Query: 258 TRVMGTYGYAAPEYISTG-HLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNL 311
+GT+GY APE + G + +D +S G +L +LL G + + K + +
Sbjct: 351 ---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 105/235 (44%), Gaps = 37/235 (15%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD---IEGLQGHREWLAEVIFL 148
+FS + ++G GGFG V+ R+ + A+K LD I+ QG L E I L
Sbjct: 190 DFSVHRIIGRGGFGEVY------GCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 149 GQLRH---PHLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIG 204
+ P +V + Y ++L + + M G L HL + S +
Sbjct: 244 SLVSTGDCPFIV-CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS-----EADMRFY 297
Query: 205 AAK---GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLA----KMGPEGSNTHVT 257
AA+ GL +H V+YRD K +NILLD ++SD GLA K P S
Sbjct: 298 AAEIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----- 350
Query: 258 TRVMGTYGYAAPEYISTG-HLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNL 311
+GT+GY APE + G + +D +S G +L +LL G + + K + +
Sbjct: 351 ---VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 94/233 (40%), Gaps = 41/233 (17%)
Query: 139 REWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHL-----FKRISVSL 193
R E+ + L HP LV L ++E+ +V + + G L HL FK +V L
Sbjct: 60 RNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL 119
Query: 194 PWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSN 253
L +L +I+RD K NILLD ++DF +A M P
Sbjct: 120 -------FICELVMALDYLQNQR--IIHRDMKPDNILLDEHGHVHITDFNIAAMLPR--E 168
Query: 254 THVTTRVMGTYGYAAPEYIST---GHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQN 310
T +TT + GT Y APE S+ + D +S GV ELL GRR
Sbjct: 169 TQITT-MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR------------ 215
Query: 311 LVDWAKPY-LRSSRRLRYIVD--PRLAGQYSVKGAKEMAVLALQCISVNPKDR 360
PY +RSS + IV Y ++EM L + + NP R
Sbjct: 216 ------PYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQR 262
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+GEG +G V Y D++ K + K+ E + L E+ L + RH +++
Sbjct: 31 IGEGAYGMVCSAY--DNVN---KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 85
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVS-LPWGTRLKIAIGAAKGLAFLHGAEN 217
+ + ++ + +E L+K + L +GL ++H A
Sbjct: 86 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN- 144
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMG-PEGSNTHVTTRVMGTYGYAAPEYISTGH 276
V++RD K SN+LL++ K+ DFGLA++ P+ +T T + T Y APE +
Sbjct: 145 -VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 277 LTTKS-DVYSFGVVLLELLTGR 297
TKS D++S G +L E+L+ R
Sbjct: 204 GYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 23/216 (10%)
Query: 99 LGEGGFGTVHKGY---IDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL--RH 153
LGEG FG V ID D + +A VAVK+L + + L + + ++ +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD--KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 154 PHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLK------------- 200
+++ L+G C +D ++ + +G+L +L R + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 201 -IAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTR 259
A+G+ +L A I+RD N+L+ + K++DFGLA+ TT
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 260 VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 104/226 (46%), Gaps = 13/226 (5%)
Query: 75 GPDLYDFQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEG 134
GP++ Q+ ++ N S +GEG +G V Y D+L K + K+ E
Sbjct: 14 GPEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAY--DNLN---KVRVAIKKISPFEH 65
Query: 135 LQGHREWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVS-L 193
+ L E+ L + RH +++ + + ++ + +E L+K + L
Sbjct: 66 QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL 125
Query: 194 PWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMG-PEGS 252
+GL ++H A V++RD K SN+LL++ K+ DFGLA++ P+
Sbjct: 126 SNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 183
Query: 253 NTHVTTRVMGTYGYAAPEYISTGHLTTKS-DVYSFGVVLLELLTGR 297
+T + T Y APE + TKS D++S G +L E+L+ R
Sbjct: 184 HTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 104/226 (46%), Gaps = 13/226 (5%)
Query: 75 GPDLYDFQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEG 134
GP++ Q+ ++ N S +GEG +G V Y D+L K + K+ E
Sbjct: 15 GPEMVRGQVFDVGPRYTNLS---YIGEGAYGMVCSAY--DNLN---KVRVAIKKISPFEH 66
Query: 135 LQGHREWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVS-L 193
+ L E+ L + RH +++ + + ++ + +E L+K + L
Sbjct: 67 QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHL 126
Query: 194 PWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMG-PEGS 252
+GL ++H A V++RD K SN+LL++ K+ DFGLA++ P+
Sbjct: 127 SNDHICYFLYQILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 184
Query: 253 NTHVTTRVMGTYGYAAPEYISTGHLTTKS-DVYSFGVVLLELLTGR 297
+T + T Y APE + TKS D++S G +L E+L+ R
Sbjct: 185 HTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLA-EVIFLGQLRHPHL 156
+LG G F V + +D R + VA+K + E L+G + E+ L +++HP++
Sbjct: 25 VLGTGAFSEV---ILAEDKR---TQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNI 78
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
V L L+ + + G L + + ++ + +RL + A + +LH +
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYLH--D 134
Query: 217 NPVIYRDFKTSNIL---LDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIS 273
+++RD K N+L LD D +SDFGL+KM GS V + GT GY APE ++
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVAPEVLA 191
Query: 274 TGHLTTKSDVYSFGVVLLELLTG 296
+ D +S GV+ LL G
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+GEG +G V Y D++ K + K+ E + L E+ L + RH +++
Sbjct: 39 IGEGAYGMVCSAY--DNVN---KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 93
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVS-LPWGTRLKIAIGAAKGLAFLHGAEN 217
+ + ++ + +E L+K + L +GL ++H A
Sbjct: 94 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN- 152
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMG-PEGSNTHVTTRVMGTYGYAAPEYISTGH 276
V++RD K SN+LL++ K+ DFGLA++ P+ +T T + T Y APE +
Sbjct: 153 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 211
Query: 277 LTTKS-DVYSFGVVLLELLTGR 297
TKS D++S G +L E+L+ R
Sbjct: 212 GYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+GEG +G V Y D++ K + K+ E + L E+ L + RH +++
Sbjct: 31 IGEGAYGMVCSAY--DNVN---KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 85
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVS-LPWGTRLKIAIGAAKGLAFLHGAEN 217
+ + ++ + +E L+K + L +GL ++H A
Sbjct: 86 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN- 144
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMG-PEGSNTHVTTRVMGTYGYAAPEYISTGH 276
V++RD K SN+LL++ K+ DFGLA++ P+ +T T + T Y APE +
Sbjct: 145 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 277 LTTKS-DVYSFGVVLLELLTGR 297
TKS D++S G +L E+L+ R
Sbjct: 204 GYTKSIDIWSVGCILAEMLSNR 225
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 98/217 (45%), Gaps = 24/217 (11%)
Query: 90 TQNFSSNY----LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWL 142
T FS Y +LG+G FG V + + Q AVK++ ++ L
Sbjct: 21 TAIFSDRYKGQRVLGKGSFGEVIL------CKDKITGQECAVKVISKRQVKQKTDKESLL 74
Query: 143 AEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
EV L QL HP++++L + + LV E G L + + R S R I
Sbjct: 75 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--II 132
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNTHVTTR 259
G+ ++H +N +++RD K N+LL+S D ++ DFGL+ +
Sbjct: 133 RQVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKD 187
Query: 260 VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+GT Y APE + G K DV+S GV+L LL+G
Sbjct: 188 KIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+GEG +G V Y D++ K + K+ E + L E+ L + RH +++
Sbjct: 33 IGEGAYGMVCSAY--DNVN---KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 87
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVS-LPWGTRLKIAIGAAKGLAFLHGAEN 217
+ + ++ + +E L+K + L +GL ++H A
Sbjct: 88 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN- 146
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMG-PEGSNTHVTTRVMGTYGYAAPEYISTGH 276
V++RD K SN+LL++ K+ DFGLA++ P+ +T T + T Y APE +
Sbjct: 147 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 277 LTTKS-DVYSFGVVLLELLTGR 297
TKS D++S G +L E+L+ R
Sbjct: 206 GYTKSIDIWSVGCILAEMLSNR 227
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 100/220 (45%), Gaps = 26/220 (11%)
Query: 87 RAITQNFSSNYLLGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWL 142
R +F+ +LG+G FG V KG D+ + + V ++ D+E + L
Sbjct: 16 RMKLTDFNFLMVLGKGSFGKVMLSERKG-TDELYAVKILKKDVVIQDDDVECTMVEKRVL 74
Query: 143 A---EVIFLGQLRHPHLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTR 198
A + FL QL C + +RL V E++ G L H+ + P
Sbjct: 75 ALPGKPPFLTQLHS---------CFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF 125
Query: 199 LKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTT 258
I A GL FL +IYRD K N++LDS+ K++DFG+ K E VTT
Sbjct: 126 YAAEI--AIGLFFLQS--KGIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTT 178
Query: 259 RVM-GTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGR 297
+ GT Y APE I+ D ++FGV+L E+L G+
Sbjct: 179 KXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+GEG +G V Y D++ K + K+ E + L E+ L + RH +++
Sbjct: 51 IGEGAYGMVCSAY--DNVN---KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 105
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVS-LPWGTRLKIAIGAAKGLAFLHGAEN 217
+ + ++ + +E L+K + L +GL ++H A
Sbjct: 106 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN- 164
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMG-PEGSNTHVTTRVMGTYGYAAPEYISTGH 276
V++RD K SN+LL++ K+ DFGLA++ P+ +T T + T Y APE +
Sbjct: 165 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 223
Query: 277 LTTKS-DVYSFGVVLLELLTGR 297
TKS D++S G +L E+L+ R
Sbjct: 224 GYTKSIDIWSVGCILAEMLSNR 245
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+GEG +G V Y D++ K + K+ E + L E+ L + RH +++
Sbjct: 31 IGEGAYGMVCSAY--DNVN---KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 85
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVS-LPWGTRLKIAIGAAKGLAFLHGAEN 217
+ + ++ + +E L+K + L +GL ++H A
Sbjct: 86 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN- 144
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMG-PEGSNTHVTTRVMGTYGYAAPEYISTGH 276
V++RD K SN+LL++ K+ DFGLA++ P+ +T T + T Y APE +
Sbjct: 145 -VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 277 LTTKS-DVYSFGVVLLELLTGR 297
TKS D++S G +L E+L+ R
Sbjct: 204 GYTKSIDIWSVGCILAEMLSNR 225
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 99/222 (44%), Gaps = 34/222 (15%)
Query: 90 TQNFSSNY----LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWL 142
T FS Y +LG+G FG V + + Q AVK++ ++ L
Sbjct: 45 TAIFSDRYKGQRVLGKGSFGEVIL------CKDKITGQECAVKVISKRQVKQKTDKESLL 98
Query: 143 AEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
EV L QL HP++++L + + LV E G L + + R S R I
Sbjct: 99 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--II 156
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNTHVTTR 259
G+ ++H +N +++RD K N+LL+S D ++ DFGL+ TH
Sbjct: 157 RQVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS--------THFEAS 206
Query: 260 -----VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+GT Y APE + G K DV+S GV+L LL+G
Sbjct: 207 KKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 247
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 106/245 (43%), Gaps = 34/245 (13%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQ--GHREWLAEVIFLG 149
N+ +G+G F V R L + VAVK++D L ++ EV +
Sbjct: 16 NYRLQKTIGKGNFAKVKLA------RHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMK 69
Query: 150 QLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK-- 207
L HP++V+L ++ LV E+ G + ++L R+K AK
Sbjct: 70 ILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKFR 121
Query: 208 ----GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGT 263
+ + H + +++RD K N+LLD D K++DFG + G+ G+
Sbjct: 122 QIVSAVQYCH--QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT---FCGS 176
Query: 264 YGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSS 322
YAAPE + + + DV+S GV+L L++G D QNL + + LR
Sbjct: 177 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG------QNLKELRERVLRGK 230
Query: 323 RRLRY 327
R+ +
Sbjct: 231 YRIPF 235
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 99/222 (44%), Gaps = 34/222 (15%)
Query: 90 TQNFSSNY----LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWL 142
T FS Y +LG+G FG V + + Q AVK++ ++ L
Sbjct: 44 TAIFSDRYKGQRVLGKGSFGEVIL------CKDKITGQECAVKVISKRQVKQKTDKESLL 97
Query: 143 AEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
EV L QL HP++++L + + LV E G L + + R S R I
Sbjct: 98 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--II 155
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNTHVTTR 259
G+ ++H +N +++RD K N+LL+S D ++ DFGL+ TH
Sbjct: 156 RQVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS--------THFEAS 205
Query: 260 -----VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+GT Y APE + G K DV+S GV+L LL+G
Sbjct: 206 KKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 246
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 98/217 (45%), Gaps = 24/217 (11%)
Query: 90 TQNFSSNY----LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWL 142
T FS Y +LG+G FG V + + Q AVK++ ++ L
Sbjct: 27 TAIFSDRYKGQRVLGKGSFGEVIL------CKDKITGQECAVKVISKRQVKQKTDKESLL 80
Query: 143 AEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
EV L QL HP++++L + + LV E G L + + R S R I
Sbjct: 81 REVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--II 138
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNTHVTTR 259
G+ ++H +N +++RD K N+LL+S D ++ DFGL+ +
Sbjct: 139 RQVLSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKMKD 193
Query: 260 VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+GT Y APE + G K DV+S GV+L LL+G
Sbjct: 194 KIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 229
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKA-QAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHL 156
+LG G F V +D Q L A + +A K L EG +G E E+ L +++HP++
Sbjct: 25 VLGTGAFSEVILA--EDKRTQKLVAIKCIAKKAL--EGKEGSME--NEIAVLHKIKHPNI 78
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
V L L+ + + G L + + ++ + +RL + A + +LH +
Sbjct: 79 VALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYLH--D 134
Query: 217 NPVIYRDFKTSNIL---LDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIS 273
+++RD K N+L LD D +SDFGL+KM GS V + GT GY APE ++
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---VLSTACGTPGYVAPEVLA 191
Query: 274 TGHLTTKSDVYSFGVVLLELLTG 296
+ D +S GV+ LL G
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 105/238 (44%), Gaps = 34/238 (14%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH--REWLAEVIFLGQLRHPHL 156
+G+G F V R L + VAVK++D L ++ EV + L HP++
Sbjct: 22 IGKGNFAKVKLA------RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK------GLA 210
V+L ++ LV E+ G + ++L R+K AK +
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKFRQIVSAVQ 127
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE 270
+ H + +++RD K N+LLD+D K++DFG + G+ G+ YAAPE
Sbjct: 128 YCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPE 182
Query: 271 -YISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
+ + + DV+S GV+L L++G D QNL + + LR R+ +
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG------QNLKELRERVLRGKYRIPF 234
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 10/202 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+GEG +G V Y D++ K + K+ E + L E+ L RH +++
Sbjct: 33 IGEGAYGMVCSAY--DNVN---KVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIG 87
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVS-LPWGTRLKIAIGAAKGLAFLHGAEN 217
+ + ++ + +E L+K + L +GL ++H A
Sbjct: 88 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN- 146
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMG-PEGSNTHVTTRVMGTYGYAAPEYISTGH 276
V++RD K SN+LL++ K+ DFGLA++ P+ +T T + T Y APE +
Sbjct: 147 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 277 LTTKS-DVYSFGVVLLELLTGR 297
TKS D++S G +L E+L+ R
Sbjct: 206 GYTKSIDIWSVGCILAEMLSNR 227
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 105/238 (44%), Gaps = 34/238 (14%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH--REWLAEVIFLGQLRHPHL 156
+G+G F V R L + VAVK++D L ++ EV + L HP++
Sbjct: 22 IGKGNFAKVKLA------RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK------GLA 210
V+L ++ LV E+ G + ++L R+K AK +
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKFRQIVSAVQ 127
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE 270
+ H + +++RD K N+LLD+D K++DFG + G+ G+ YAAPE
Sbjct: 128 YCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPE 182
Query: 271 -YISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
+ + + DV+S GV+L L++G D QNL + + LR R+ +
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG------QNLKELRERVLRGKYRIPF 234
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 26/234 (11%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH--REWLAEVIFLGQLRHPHL 156
+G+G F V R L + VAVK++D L ++ EV + L HP++
Sbjct: 15 IGKGNFAKVKLA------RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 68
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL--AFLHG 214
V+L ++ LV E+ G + ++L V+ W + K A + + A +
Sbjct: 69 VKLFEVIETEKTLYLVMEYASGGEVFDYL-----VAHGW-MKEKEARAKFRQIVSAVQYC 122
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE-YIS 273
+ +++RD K N+LLD+D K++DFG + G+ G+ YAAPE +
Sbjct: 123 HQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPPYAAPELFQG 179
Query: 274 TGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
+ + DV+S GV+L L++G D QNL + + LR R+ +
Sbjct: 180 KKYDGPEVDVWSLGVILYTLVSGSLPFDG------QNLKELRERVLRGKYRIPF 227
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 23/216 (10%)
Query: 99 LGEGGFGTVHKGY---IDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL--RH 153
LGEG FG V ID D + +A VAVK+L + + L + + ++ +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKD--KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 154 PHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLK------------- 200
+++ L+G C +D ++ + +G+L +L R + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 201 -IAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTR 259
A+G+ +L A I+RD N+L+ + K++DFGLA+ TT
Sbjct: 161 SCTYQLARGMEYL--ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 260 VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 16/206 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEG--LQGHREWLAEVIFLGQLRHPHL 156
LGE G GT + + +R +AVK + G + R + + L P++
Sbjct: 30 LGEMGSGTCGQVW---KMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYI 86
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
V+ G + + + E M G+ L KR+ +P K+ + K L +L +
Sbjct: 87 VQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK-EK 143
Query: 217 NPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGH 276
+ VI+RD K SNILLD KL DFG++ + R G Y APE I
Sbjct: 144 HGVIHRDVKPSNILLDERGQIKLCDFGISG---RLVDDKAKDRSAGCAAYMAPERIDPPD 200
Query: 277 LT-----TKSDVYSFGVVLLELLTGR 297
T ++DV+S G+ L+EL TG+
Sbjct: 201 PTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 10/202 (4%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+GEG +G V Y D++ K + K+ E + L E+ L RH +++
Sbjct: 33 IGEGAYGMVCSAY--DNVN---KVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIG 87
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVS-LPWGTRLKIAIGAAKGLAFLHGAEN 217
+ + ++ + +E L+K + L +GL ++H A
Sbjct: 88 INDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN- 146
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMG-PEGSNTHVTTRVMGTYGYAAPEYISTGH 276
V++RD K SN+LL++ K+ DFGLA++ P+ +T T + T Y APE +
Sbjct: 147 -VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 277 LTTKS-DVYSFGVVLLELLTGR 297
TKS D++S G +L E+L+ R
Sbjct: 206 GYTKSIDIWSVGCILAEMLSNR 227
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 111/247 (44%), Gaps = 62/247 (25%)
Query: 87 RAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVI 146
R + + + +G+G +G V +G L G ++VAVK+ Q W E
Sbjct: 4 RTVARQVALVECVGKGRYGEVWRG-----LWHG---ESVAVKIFSSRDEQS---WFRETE 52
Query: 147 FLGQ--LRHPHLVRLIGYCCED----------------EERLLVYEFMPRGSLENHLFKR 188
LRH ++ +G+ D E +Y+F+ R +LE HL
Sbjct: 53 IYNTVLLRHDNI---LGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHL--- 106
Query: 189 ISVSLPWGTRLKIAIGAAKGLAFLH----GAE-NPVI-YRDFKTSNILLDSDFTAKLSDF 242
L++A+ AA GLA LH G + P I +RDFK+ N+L+ S+ ++D
Sbjct: 107 ---------ALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADL 157
Query: 243 GLAKMGPEGS---NTHVTTRVMGTYGYAAPEYISTGHLT------TKSDVYSFGVVLLEL 293
GLA M +GS + RV GT Y APE + T +D+++FG+VL E+
Sbjct: 158 GLAVMHSQGSDYLDIGNNPRV-GTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
Query: 294 LTGRRSM 300
RR++
Sbjct: 217 --ARRTI 221
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 99/208 (47%), Gaps = 26/208 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFLGQLRHPHL 156
+G G +G+V Y D LRQ VAVK L + L R E+ L L+H ++
Sbjct: 36 VGSGAYGSVCSAY-DARLRQ-----KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENV 89
Query: 157 VRLI-----GYCCED-EERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLA 210
+ L+ ED E LV M G+ N++ K ++S L + +GL
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKSQALSDEHVQFLVYQL--LRGLK 145
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE 270
++H A +I+RD K SN+ ++ D ++ DFGLA+ E +V TR Y APE
Sbjct: 146 YIHSA--GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPE 198
Query: 271 -YISTGHLTTKSDVYSFGVVLLELLTGR 297
++ H D++S G ++ ELL G+
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 99/216 (45%), Gaps = 20/216 (9%)
Query: 98 LLGE-GGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHL 156
++GE G FG V+K + + A K++D + + +++ E+ L HP++
Sbjct: 16 IIGELGDFGKVYKA------QNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 69
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
V+L+ + ++ EF G+++ + + + L + L +LH +
Sbjct: 70 VKLLDAFYYENNLWILIEFCAGGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLH--D 126
Query: 217 NPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTR--VMGTYGYAAPEYIST 274
N +I+RD K NIL D KL+DFG++ + + T + R +GT + APE +
Sbjct: 127 NKIIHRDLKAGNILFTLDGDIKLADFGVSA---KNTRTXIQRRDSFIGTPYWMAPEVVMC 183
Query: 275 GH-----LTTKSDVYSFGVVLLELLTGRRSMDKLRP 305
K+DV+S G+ L+E+ +L P
Sbjct: 184 ETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNP 219
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 34/227 (14%)
Query: 87 RAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWL--AE 144
R I + +G+G FG V +G + + VAVK+ + R W AE
Sbjct: 38 RTIARTIVLQESIGKGRFGEVWRG--------KWRGEEVAVKIF---SSREERSWFREAE 86
Query: 145 VIFLGQLRHPHLVRLIGYCCEDE----ERLLVYEFMPRGSLENHLFKRISVSLPWGTRLK 200
+ LRH +++ I +D + LV ++ GSL ++L R +V++ +K
Sbjct: 87 IYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVE--GMIK 143
Query: 201 IAIGAAKGLAFLH----GAE-NPVI-YRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNT 254
+A+ A GLA LH G + P I +RD K+ NIL+ + T ++D GLA ++T
Sbjct: 144 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT 203
Query: 255 --HVTTRVMGTYGYAAPEY----ISTGHLTT--KSDVYSFGVVLLEL 293
+GT Y APE I+ H + ++D+Y+ G+V E+
Sbjct: 204 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 104/238 (43%), Gaps = 34/238 (14%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH--REWLAEVIFLGQLRHPHL 156
+G+G F V R L + VAVK++D L ++ EV + L HP++
Sbjct: 22 IGKGNFAKVKLA------RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK------GLA 210
V+L ++ LV E+ G + ++L R+K AK +
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKFRQIVSAVQ 127
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE 270
+ H + +++RD K N+LLD+D K++DFG + G+ G YAAPE
Sbjct: 128 YCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPE 182
Query: 271 -YISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
+ + + DV+S GV+L L++G D QNL + + LR R+ +
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG------QNLKELRERVLRGKYRIPF 234
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+GEG +G V Y D++ K + K+ E + L E+ L + RH +++
Sbjct: 51 IGEGAYGMVCSAY--DNVN---KVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIG 105
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLK------IAIGAAKGLAFL 212
+ D R E M L HL L L +GL ++
Sbjct: 106 I-----NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYI 160
Query: 213 HGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMG-PEGSNTHVTTRVMGTYGYAAPEY 271
H A V++RD K SN+LL++ K+ DFGLA++ P+ +T T + T Y APE
Sbjct: 161 HSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 218
Query: 272 ISTGHLTTKS-DVYSFGVVLLELLTGR 297
+ TKS D++S G +L E+L+ R
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 118/275 (42%), Gaps = 42/275 (15%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL--DIEGLQGHREWLAEVIFLGQLRHPHL 156
LG G +G V K +R Q +AVK + + + R + I + + P
Sbjct: 59 LGRGAYGVVEK------MRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFT 112
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRI---SVSLPWGTRLKIAIGAAKGLAFLH 213
V G + + + E M SL+ +K++ ++P KIA+ K L LH
Sbjct: 113 VTFYGALFREGDVWICMELM-DTSLDK-FYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 170
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYI- 272
+ VI+RD K SN+L+++ K+ DFG++ ++ T G Y APE I
Sbjct: 171 SKLS-VIHRDVKPSNVLINALGQVKMCDFGISGY---LVDSVAKTIDAGCKPYMAPERIN 226
Query: 273 ---STGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIV 329
+ + KSD++S G+ ++EL R D W P+ ++L+ +V
Sbjct: 227 PELNQKGYSVKSDIWSLGITMIELAILRFPYDS-----------WGTPF----QQLKQVV 271
Query: 330 D---PRLAGQYSVKGAKEMAVLALQCISVNPKDRP 361
+ P+L K + E QC+ N K+RP
Sbjct: 272 EEPSPQLPAD---KFSAEFVDFTSQCLKKNSKERP 303
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 34/227 (14%)
Query: 87 RAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWL--AE 144
R I + +G+G FG V +G + + VAVK+ + R W AE
Sbjct: 25 RTIARTIVLQESIGKGRFGEVWRG--------KWRGEEVAVKIF---SSREERSWFREAE 73
Query: 145 VIFLGQLRHPHLVRLIGYCCEDE----ERLLVYEFMPRGSLENHLFKRISVSLPWGTRLK 200
+ LRH +++ I +D + LV ++ GSL ++L R +V++ +K
Sbjct: 74 IYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVE--GMIK 130
Query: 201 IAIGAAKGLAFLH----GAE-NPVI-YRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNT 254
+A+ A GLA LH G + P I +RD K+ NIL+ + T ++D GLA ++T
Sbjct: 131 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT 190
Query: 255 --HVTTRVMGTYGYAAPEY----ISTGHLTT--KSDVYSFGVVLLEL 293
+GT Y APE I+ H + ++D+Y+ G+V E+
Sbjct: 191 IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 99/208 (47%), Gaps = 26/208 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFLGQLRHPHL 156
+G G +G+V Y D LRQ VAVK L + L R E+ L L+H ++
Sbjct: 28 VGSGAYGSVCSAY-DARLRQ-----KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENV 81
Query: 157 VRLI-----GYCCED-EERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLA 210
+ L+ ED E LV M G+ N++ K ++S L + +GL
Sbjct: 82 IGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQL--LRGLK 137
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE 270
++H A +I+RD K SN+ ++ D ++ DFGLA+ E +V TR Y APE
Sbjct: 138 YIHSA--GIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----WYRAPE 190
Query: 271 -YISTGHLTTKSDVYSFGVVLLELLTGR 297
++ H D++S G ++ ELL G+
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 29/205 (14%)
Query: 122 AQAVAVKLLDIEG--------LQGHRE-WLAEVIFLGQLR-HPHLVRLIGYCCEDEERLL 171
+ AVK++D+ G +Q RE L EV L ++ HP++++L + L
Sbjct: 29 CKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFL 88
Query: 172 VYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILL 231
V++ M +G L ++L +++++S TR KI + + LH +++RD K NILL
Sbjct: 89 VFDLMKKGELFDYLTEKVTLS-EKETR-KIMRALLEVICALHKLN--IVHRDLKPENILL 144
Query: 232 DSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGH------LTTKSDVYS 285
D D KL+DFG + G V GT Y APE I + D++S
Sbjct: 145 DDDMNIKLTDFGFSCQLDPGEKLR---EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 201
Query: 286 FGVVLLELLTG------RRSMDKLR 304
GV++ LL G R+ M LR
Sbjct: 202 TGVIMYTLLAGSPPFWHRKQMLMLR 226
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 122/283 (43%), Gaps = 27/283 (9%)
Query: 78 LYDFQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQG 137
L + LS LR F L+G G +G V+KG R Q A+K++D+ G +
Sbjct: 11 LDEIDLSALRDPAGIFELVELVGNGTYGQVYKG------RHVKTGQLAAIKVMDVTGDE- 63
Query: 138 HREWLAEVIFLGQL-RHPHLVRLIGYCCE------DEERLLVYEFMPRGSLENHLFKRIS 190
E E+ L + H ++ G + D++ LV EF GS+ + +
Sbjct: 64 EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG 123
Query: 191 VSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPE 250
+L I +GL+ LH ++ VI+RD K N+LL + KL DFG++
Sbjct: 124 NTLKEEWIAYICREILRGLSHLH--QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR 181
Query: 251 GSNTHVTTRVMGTYGYAAPEYISTGH-----LTTKSDVYSFGVVLLELLTGRRSMDKLRP 305
T +GT + APE I+ KSD++S G+ +E+ G + + P
Sbjct: 182 TVGRRNT--FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP 239
Query: 306 KSEQNLVDW-AKPYLRS---SRRLRYIVDPRLAGQYSVKGAKE 344
L+ P L+S S++ + ++ L +S + A E
Sbjct: 240 MRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATE 282
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 39/235 (16%)
Query: 80 DFQLSELRAITQNFSSNYL-----LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEG 134
D + E +A+ + +L +G G F TV+KG L + +L D +
Sbjct: 10 DIEELETKAVGXSNDGRFLKFDIEIGRGSFKTVYKG-----LDTETTVEVAWCELQDRKL 64
Query: 135 LQGHRE-WLAEVIFLGQLRHPHLVRLI--------GYCCEDEERLLVYEFMPRGSLENHL 185
+ R+ + E L L+HP++VR G C +LV E G+L+ +L
Sbjct: 65 TKSERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKC----IVLVTELXTSGTLKTYL 120
Query: 186 --FK--RISVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDF-TAKLS 240
FK +I V W ++ KGL FLH P+I+RD K NI + + K+
Sbjct: 121 KRFKVXKIKVLRSWCRQI------LKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIG 174
Query: 241 DFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
D GLA + V+GT + APE + DVY+FG LE T
Sbjct: 175 DLGLATL----KRASFAKAVIGTPEFXAPEXYEEKY-DESVDVYAFGXCXLEXAT 224
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 106/238 (44%), Gaps = 34/238 (14%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH--REWLAEVIFLGQLRHPHL 156
+G+G F V R L + VAV+++D L ++ EV + L HP++
Sbjct: 22 IGKGNFAKVKLA------RHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK------GLA 210
V+L ++ LV E+ G + ++L R+K AK +
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKFRQIVSAVQ 127
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE 270
+ H + +++RD K N+LLD+D K++DFG + E + + G+ YAAPE
Sbjct: 128 YCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSN---EFTFGNKLDEFCGSPPYAAPE 182
Query: 271 -YISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
+ + + DV+S GV+L L++G D QNL + + LR R+ +
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG------QNLKELRERVLRGKYRIPF 234
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 34/215 (15%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWL--AEVIFLGQLRHPHL 156
+G+G FG V +G + + VAVK+ + R W AE+ LRH ++
Sbjct: 12 IGKGRFGEVWRG--------KWRGEEVAVKIF---SSREERSWFREAEIYQTVMLRHENI 60
Query: 157 VRLIGYCCEDE----ERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFL 212
+ I +D + LV ++ GSL ++L R +V++ +K+A+ A GLA L
Sbjct: 61 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVE--GMIKLALSTASGLAHL 117
Query: 213 H----GAE-NPVI-YRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNT--HVTTRVMGTY 264
H G + P I +RD K+ NIL+ + T ++D GLA ++T +GT
Sbjct: 118 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 177
Query: 265 GYAAPEY----ISTGHLTT--KSDVYSFGVVLLEL 293
Y APE I+ H + ++D+Y+ G+V E+
Sbjct: 178 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 105/238 (44%), Gaps = 34/238 (14%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH--REWLAEVIFLGQLRHPHL 156
+G+G F V R L + VAV+++D L ++ EV + L HP++
Sbjct: 22 IGKGNFAKVKLA------RHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK------GLA 210
V+L ++ LV E+ G + ++L R+K AK +
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--------GRMKEKEARAKFRQIVSAVQ 127
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE 270
+ H + +++RD K N+LLD+D K++DFG + G+ G+ YAAPE
Sbjct: 128 YCH--QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPE 182
Query: 271 -YISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
+ + + DV+S GV+L L++G D QNL + + LR R+ +
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG------QNLKELRERVLRGKYRIPF 234
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 97/228 (42%), Gaps = 31/228 (13%)
Query: 82 QLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD----IEGLQG 137
++ +LR +++ ++G G FG V +R + A+KLL I+
Sbjct: 60 KIRDLRMKAEDYEVVKVIGRGAFGEVQL------VRHKSTRKVYAMKLLSKFEMIKRSDS 113
Query: 138 HREWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWG- 196
W E + P +V+L +D +V E+MP G L N L V W
Sbjct: 114 AFFW-EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWAR 171
Query: 197 ---TRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLA-KMGPEGS 252
+ +A+ A + F+H RD K N+LLD KL+DFG KM EG
Sbjct: 172 FYTAEVVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 223
Query: 253 NTHVTTRVMGTYGYAAPEYIST----GHLTTKSDVYSFGVVLLELLTG 296
T +GT Y +PE + + G+ + D +S GV L E+L G
Sbjct: 224 VRCDTA--VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 34/215 (15%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWL--AEVIFLGQLRHPHL 156
+G+G FG V +G + + VAVK+ + R W AE+ LRH ++
Sbjct: 11 IGKGRFGEVWRG--------KWRGEEVAVKIF---SSREERSWFREAEIYQTVMLRHENI 59
Query: 157 VRLIGYCCEDE----ERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFL 212
+ I +D + LV ++ GSL ++L R +V++ +K+A+ A GLA L
Sbjct: 60 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVE--GMIKLALSTASGLAHL 116
Query: 213 H----GAE-NPVI-YRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNT--HVTTRVMGTY 264
H G + P I +RD K+ NIL+ + T ++D GLA ++T +GT
Sbjct: 117 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 176
Query: 265 GYAAPEY----ISTGHLTT--KSDVYSFGVVLLEL 293
Y APE I+ H + ++D+Y+ G+V E+
Sbjct: 177 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 34/215 (15%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWL--AEVIFLGQLRHPHL 156
+G+G FG V +G + + VAVK+ + R W AE+ LRH ++
Sbjct: 17 IGKGRFGEVWRG--------KWRGEEVAVKIF---SSREERSWFREAEIYQTVMLRHENI 65
Query: 157 VRLIGYCCEDE----ERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFL 212
+ I +D + LV ++ GSL ++L R +V++ +K+A+ A GLA L
Sbjct: 66 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVE--GMIKLALSTASGLAHL 122
Query: 213 H----GAE-NPVI-YRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNT--HVTTRVMGTY 264
H G + P I +RD K+ NIL+ + T ++D GLA ++T +GT
Sbjct: 123 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 182
Query: 265 GYAAPEY----ISTGHLTT--KSDVYSFGVVLLEL 293
Y APE I+ H + ++D+Y+ G+V E+
Sbjct: 183 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 99/208 (47%), Gaps = 26/208 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFLGQLRHPHL 156
+G G +G+V Y D LRQ VAVK L + L R E+ L L+H ++
Sbjct: 36 VGSGAYGSVCSAY-DARLRQ-----KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENV 89
Query: 157 VRLI-----GYCCED-EERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLA 210
+ L+ ED E LV M G+ N++ K ++S L + +GL
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQL--LRGLK 145
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE 270
++H A +I+RD K SN+ ++ D ++ DFGLA+ E +V TR Y APE
Sbjct: 146 YIHSA--GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPE 198
Query: 271 -YISTGHLTTKSDVYSFGVVLLELLTGR 297
++ H D++S G ++ ELL G+
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 107/241 (44%), Gaps = 39/241 (16%)
Query: 90 TQNFSSNY----LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEG--------LQG 137
T F NY +LG G V + + AVK++D+ G +Q
Sbjct: 12 THGFYENYEPKEILGRGVSSVVRRCI------HKPTCKEYAVKIIDVTGGGSFSAEEVQE 65
Query: 138 HRE-WLAEVIFLGQLR-HPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPW 195
RE L EV L ++ HP++++L + LV++ M +G L ++L +++++S
Sbjct: 66 LREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLS-EK 124
Query: 196 GTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTH 255
TR KI + + LH +++RD K NILLD D KL+DFG + G
Sbjct: 125 ETR-KIMRALLEVICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR 181
Query: 256 VTTRVMGTYGYAAPEYISTGH------LTTKSDVYSFGVVLLELLTG------RRSMDKL 303
V GT Y APE I + D++S GV++ LL G R+ M L
Sbjct: 182 ---EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 238
Query: 304 R 304
R
Sbjct: 239 R 239
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 34/215 (15%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWL--AEVIFLGQLRHPHL 156
+G+G FG V +G + + VAVK+ + R W AE+ LRH ++
Sbjct: 14 IGKGRFGEVWRG--------KWRGEEVAVKIF---SSREERSWFREAEIYQTVMLRHENI 62
Query: 157 VRLIGYCCEDE----ERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFL 212
+ I +D + LV ++ GSL ++L R +V++ +K+A+ A GLA L
Sbjct: 63 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVE--GMIKLALSTASGLAHL 119
Query: 213 H----GAE-NPVI-YRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNT--HVTTRVMGTY 264
H G + P I +RD K+ NIL+ + T ++D GLA ++T +GT
Sbjct: 120 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTK 179
Query: 265 GYAAPEY----ISTGHLTT--KSDVYSFGVVLLEL 293
Y APE I+ H + ++D+Y+ G+V E+
Sbjct: 180 RYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 97/228 (42%), Gaps = 31/228 (13%)
Query: 82 QLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD----IEGLQG 137
++ +LR +++ ++G G FG V +R + A+KLL I+
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEVQL------VRHKSTRKVYAMKLLSKFEMIKRSDS 118
Query: 138 HREWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWG- 196
W E + P +V+L +D +V E+MP G L N L V W
Sbjct: 119 AFFW-EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWAR 176
Query: 197 ---TRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLA-KMGPEGS 252
+ +A+ A + F+H RD K N+LLD KL+DFG KM EG
Sbjct: 177 FYTAEVVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 228
Query: 253 NTHVTTRVMGTYGYAAPEYIST----GHLTTKSDVYSFGVVLLELLTG 296
T V GT Y +PE + + G+ + D +S GV L E+L G
Sbjct: 229 -VRCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 96/217 (44%), Gaps = 24/217 (11%)
Query: 90 TQNFSSNY----LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL---DIEGLQGHREWL 142
T FS Y +LG+G FG V + + Q AVK++ ++ L
Sbjct: 21 TAIFSDRYKGQRVLGKGSFGEVIL------CKDKITGQECAVKVISKRQVKQKTDKESLL 74
Query: 143 AEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
EV L QL HP++ +L + + LV E G L + + R S R I
Sbjct: 75 REVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--II 132
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNTHVTTR 259
G+ + H +N +++RD K N+LL+S D ++ DFGL+ +
Sbjct: 133 RQVLSGITYXH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS---THFEASKKXKD 187
Query: 260 VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+GT Y APE + G K DV+S GV+L LL+G
Sbjct: 188 KIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSG 223
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 118/275 (42%), Gaps = 42/275 (15%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL--DIEGLQGHREWLAEVIFLGQLRHPHL 156
LG G +G V K +R Q +AVK + + + R + I + + P
Sbjct: 15 LGRGAYGVVEK------MRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFT 68
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRI---SVSLPWGTRLKIAIGAAKGLAFLH 213
V G + + + E M SL+ +K++ ++P KIA+ K L LH
Sbjct: 69 VTFYGALFREGDVWICMELM-DTSLDK-FYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 126
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYI- 272
++ VI+RD K SN+L+++ K+ DFG++ + + G Y APE I
Sbjct: 127 -SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA---GCKPYMAPERIN 182
Query: 273 ---STGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIV 329
+ + KSD++S G+ ++EL R D W P+ ++L+ +V
Sbjct: 183 PELNQKGYSVKSDIWSLGITMIELAILRFPYDS-----------WGTPF----QQLKQVV 227
Query: 330 D---PRLAGQYSVKGAKEMAVLALQCISVNPKDRP 361
+ P+L K + E QC+ N K+RP
Sbjct: 228 EEPSPQLPAD---KFSAEFVDFTSQCLKKNSKERP 259
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 107/241 (44%), Gaps = 39/241 (16%)
Query: 90 TQNFSSNY----LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEG--------LQG 137
T F NY +LG G V + + AVK++D+ G +Q
Sbjct: 12 THGFYENYEPKEILGRGVSSVVRRCI------HKPTCKEYAVKIIDVTGGGSFSAEEVQE 65
Query: 138 HRE-WLAEVIFLGQLR-HPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPW 195
RE L EV L ++ HP++++L + LV++ M +G L ++L +++++S
Sbjct: 66 LREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLS-EK 124
Query: 196 GTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTH 255
TR KI + + LH +++RD K NILLD D KL+DFG + G
Sbjct: 125 ETR-KIMRALLEVICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR 181
Query: 256 VTTRVMGTYGYAAPEYISTGH------LTTKSDVYSFGVVLLELLTG------RRSMDKL 303
V GT Y APE I + D++S GV++ LL G R+ M L
Sbjct: 182 ---SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 238
Query: 304 R 304
R
Sbjct: 239 R 239
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 97/228 (42%), Gaps = 31/228 (13%)
Query: 82 QLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD----IEGLQG 137
++ +LR +++ ++G G FG V +R + A+KLL I+
Sbjct: 65 KIRDLRMKAEDYEVVKVIGRGAFGEVQL------VRHKSTRKVYAMKLLSKFEMIKRSDS 118
Query: 138 HREWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWG- 196
W E + P +V+L +D +V E+MP G L N L V W
Sbjct: 119 AFFW-EERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWAR 176
Query: 197 ---TRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLA-KMGPEGS 252
+ +A+ A + F+H RD K N+LLD KL+DFG KM EG
Sbjct: 177 FYTAEVVLALDAIHSMGFIH--------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM 228
Query: 253 NTHVTTRVMGTYGYAAPEYIST----GHLTTKSDVYSFGVVLLELLTG 296
T +GT Y +PE + + G+ + D +S GV L E+L G
Sbjct: 229 VRCDTA--VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 25 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFLIYQ 133
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 134 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR--- 186
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 25 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 133
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 134 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 186
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 187 --WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 25 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFLIYQ 133
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 134 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 186
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFLGQLRHPH 155
L+GEG +G V K R + VA+K L + + + E+ L QLRH +
Sbjct: 32 LVGEGSYGMVMK------CRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHEN 85
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLEN-HLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
LV L+ C + + LV+EF+ L++ LF L + K G+ F H
Sbjct: 86 LVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPN---GLDYQVVQKYLFQIINGIGFCHS 142
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKM--GP-EGSNTHVTTRVMGTYGYAAPEY 271
+ +I+RD K NIL+ KL DFG A+ P E + V TR Y APE
Sbjct: 143 --HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATR-----WYRAPEL 195
Query: 272 ISTGHLTTKS-DVYSFGVVLLELLTGR 297
+ K+ DV++ G ++ E+ G
Sbjct: 196 LVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 107/239 (44%), Gaps = 25/239 (10%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQG-LKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHL 156
+LG+GG+G V + G + A V K + + + AE L +++HP +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 157 VRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
V LI Y + +L L+ E++ G L F ++ + A +A H
Sbjct: 84 VDLI-YAFQTGGKLYLILEYLSGGEL----FMQLEREGIFMEDTACFYLAEISMALGHLH 138
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMG-PEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K NI+L+ KL+DFGL K +G+ TH GT Y APE +
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT---FCGTIEYMAPEILMR 195
Query: 275 GHLTTKSDVYSFGVVLLELLTG---------RRSMDKLRPKSEQNLVDWAKPYLRSSRR 324
D +S G ++ ++LTG ++++DK+ K + NL PYL R
Sbjct: 196 SGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKIL-KCKLNL----PPYLTQEAR 249
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 92/223 (41%), Gaps = 29/223 (13%)
Query: 86 LRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD----IEGLQGHREW 141
L+ +++ ++G G FG V +R + A+KLL I+ W
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQL------VRHKASQKVYAMKLLSKFEMIKRSDSAFFW 123
Query: 142 LAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWG----T 197
E + P +V+L +D+ +V E+MP G L N L V W
Sbjct: 124 -EERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTA 181
Query: 198 RLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVT 257
+ +A+ A + +H RD K N+LLD KL+DFG E H
Sbjct: 182 EVVLALDAIHSMGLIH--------RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCD 233
Query: 258 TRVMGTYGYAAPEYIST----GHLTTKSDVYSFGVVLLELLTG 296
T V GT Y +PE + + G+ + D +S GV L E+L G
Sbjct: 234 TAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 121/289 (41%), Gaps = 44/289 (15%)
Query: 96 NYL--LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIE--GLQGHREWLAEVIFLGQL 151
N+L L E G + KG + + VK+L + + R++ E L
Sbjct: 13 NFLTKLNENHSGELWKGR--------WQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIF 64
Query: 152 RHPHLVRLIGYCCEDE--ERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL 209
HP+++ ++G C L+ +MP GSL N L + + + +K A+ A+G+
Sbjct: 65 SHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGM 124
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLS--DFGLAKMGPEGSNTHVTTRVMGTYGYA 267
AFLH E + + ++++D D TA++S D + P M +
Sbjct: 125 AFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGR---------MYAPAWV 175
Query: 268 APEYISTGHLTTK---SDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRR 324
APE + T +D++SF V+L EL+T L N+ K L
Sbjct: 176 APEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADL-----SNMEIGMKVALEG--- 227
Query: 325 LRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESL 373
LR + P ++ S K M + C++ +P RPK +V LE +
Sbjct: 228 LRPTIPPGISPHVS----KLMKI----CMNEDPAKRPKFDMIVPILEKM 268
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 102/228 (44%), Gaps = 27/228 (11%)
Query: 79 YDFQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL-DIEGLQG 137
+DF +L+ + + +G G +G+V+K + Q +AVK + +
Sbjct: 17 WDFTAEDLKDLGE-------IGRGAYGSVNK------MVHKPSGQIMAVKRIRSTVDEKE 63
Query: 138 HREWLAEV-IFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRG--SLENHLFKRISVSLP 194
++ L ++ + + P++V+ G + + + E M +++ + +P
Sbjct: 64 QKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIP 123
Query: 195 WGTRLKIAIGAAKGLAFLHGAEN-PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSN 253
KI + K L H EN +I+RD K SNILLD KL DFG++ + +
Sbjct: 124 EEILGKITLATVKALN--HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISG---QLVD 178
Query: 254 THVTTRVMGTYGYAAPEYI----STGHLTTKSDVYSFGVVLLELLTGR 297
+ TR G Y APE I S +SDV+S G+ L EL TGR
Sbjct: 179 SIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 107/239 (44%), Gaps = 25/239 (10%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQG-LKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHL 156
+LG+GG+G V + G + A V K + + + AE L +++HP +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFI 83
Query: 157 VRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
V LI Y + +L L+ E++ G L F ++ + A +A H
Sbjct: 84 VDLI-YAFQTGGKLYLILEYLSGGEL----FMQLEREGIFMEDTACFYLAEISMALGHLH 138
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMG-PEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K NI+L+ KL+DFGL K +G+ TH GT Y APE +
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHX---FCGTIEYMAPEILMR 195
Query: 275 GHLTTKSDVYSFGVVLLELLTG---------RRSMDKLRPKSEQNLVDWAKPYLRSSRR 324
D +S G ++ ++LTG ++++DK+ K + NL PYL R
Sbjct: 196 SGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKIL-KCKLNL----PPYLTQEAR 249
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 32 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 140
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 141 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR--- 193
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 194 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 30 QNLSP---IGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 138
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 139 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR--- 191
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 192 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 101/237 (42%), Gaps = 52/237 (21%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE-----WLAEVI 146
+F +LG+G FG V K R L ++ A+K + H E L+EV+
Sbjct: 7 DFEEIAVLGQGAFGQVVKA------RNALDSRYYAIKKI------RHTEEKLSTILSEVM 54
Query: 147 FLGQLRHPHLVRLIGYCCEDEERLLV---------------YEFMPRGSLENHLFKRISV 191
L L H ++VR Y E R V E+ G+L + L ++
Sbjct: 55 LLASLNHQYVVRY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYD-LIHSENL 111
Query: 192 SLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK----- 246
+ ++ + L+++H +I+RD K NI +D K+ DFGLAK
Sbjct: 112 NQQRDEYWRLFRQILEALSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 247 --------MGPEGSNTHVTTRVMGTYGYAAPEYIS-TGHLTTKSDVYSFGVVLLELL 294
GS+ ++T+ + GT Y A E + TGH K D+YS G++ E++
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 36 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 86
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 87 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 144
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 145 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR--- 197
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 198 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 24/233 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQ--GHREWLAEVIFLGQLRHPHL 156
+G+G F V R L + VA+K++D L ++ EV + L HP++
Sbjct: 20 IGKGNFAKVKLA------RHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 73
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWG-TRLKIAIGAAKGLAFLHGA 215
V+L ++ L+ E+ G + ++L + ++ + + A + + H
Sbjct: 74 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ---YCH-- 128
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE-YIST 274
+ +++RD K N+LLD+D K++DFG + G G+ YAAPE +
Sbjct: 129 QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT---FCGSPPYAAPELFQGK 185
Query: 275 GHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
+ + DV+S GV+L L++G D QNL + + LR R+ +
Sbjct: 186 KYDGPEVDVWSLGVILYTLVSGSLPFDG------QNLKELRERVLRGKYRIPF 232
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 104/233 (44%), Gaps = 24/233 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQ--GHREWLAEVIFLGQLRHPHL 156
+G+G F V R L + VA+K++D L ++ EV + L HP++
Sbjct: 23 IGKGNFAKVKLA------RHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWG-TRLKIAIGAAKGLAFLHGA 215
V+L ++ L+ E+ G + ++L + ++ + + A + + H
Sbjct: 77 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ---YCH-- 131
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE-YIST 274
+ +++RD K N+LLD+D K++DFG + G G YAAPE +
Sbjct: 132 QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA---FCGAPPYAAPELFQGK 188
Query: 275 GHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
+ + DV+S GV+L L++G D QNL + + LR R+ +
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSGSLPFDG------QNLKELRERVLRGKYRIPF 235
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 32 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 140
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 141 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR--- 193
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 194 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 20/208 (9%)
Query: 94 SSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRH 153
S +LG G FG VHK ++ GLK +A K++ G++ E E+ + QL H
Sbjct: 92 SKTEILGGGRFGQVHKC---EETATGLK---LAAKIIKTRGMKDKEEVKNEISVMNQLDH 145
Query: 154 PHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRI---SVSLPWGTRLKIAIGAAKGLA 210
+L++L + +LV E++ G L F RI S +L + +G+
Sbjct: 146 ANLIQLYDAFESKNDIVLVMEYVDGGEL----FDRIIDESYNLTELDTILFMKQICEGIR 201
Query: 211 FLHGAENPVIYRDFKTSNIL-LDSDFTA-KLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
+H + +++ D K NIL ++ D K+ DFGLA+ V GT + A
Sbjct: 202 HMH--QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN---FGTPEFLA 256
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLTG 296
PE ++ ++ +D++S GV+ LL+G
Sbjct: 257 PEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 32 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 140
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 141 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR--- 193
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 194 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 32 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 82
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 140
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 141 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 193
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 194 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 36 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 86
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 87 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 144
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 145 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 197
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 198 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 27 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 135
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 136 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 188
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 189 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 30 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 138
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 139 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR--- 191
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 192 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 25 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 133
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 134 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 186
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 25 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 133
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 134 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 186
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 25 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 133
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 134 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 186
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 37 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSKPFQSIIHAKRTYRELRLL 87
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 145
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 146 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 198
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 199 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 25 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 133
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 134 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 186
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 30 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 138
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 139 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 191
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 192 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 37 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 87
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 145
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 146 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 198
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 199 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 25 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 133
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 134 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 186
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 24 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 74
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 75 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 132
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 133 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 185
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 186 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 37 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 87
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 88 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 145
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 146 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 198
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 199 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 27 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 135
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 136 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 188
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 189 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 21 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 129
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 130 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 182
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 183 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 25 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 133
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 134 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 186
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 25 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 133
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 134 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 186
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 22 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 72
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 73 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 130
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 131 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 183
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 184 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 22 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 72
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 73 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 130
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 131 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 183
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 184 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 31 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 139
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 140 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 192
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 193 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 45 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 95
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 153
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 154 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 206
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 207 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 27 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 135
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 136 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 188
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 189 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 27 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 77
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 135
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 136 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR--- 188
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 189 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 44 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 94
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 95 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 152
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 153 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 205
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 206 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 30 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 80
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 138
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 139 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 191
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 192 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 23 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 73
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 74 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 131
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 132 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 184
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 185 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 48 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 98
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 99 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 156
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 157 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 209
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 210 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 18/208 (8%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH-----REWLAEVIFLGQLR 152
++G+G F V + + Q AVK++D+ + E L+
Sbjct: 31 VIGKGAFSVVRRCINRE------TGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 153 HPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFL 212
HPH+V L+ D +V+EFM L + KR + + A
Sbjct: 85 HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR 144
Query: 213 HGAENPVIYRDFKTSNILLDSDFTA---KLSDFGLA-KMGPEGSNTHVTTRVMGTYGYAA 268
+ +N +I+RD K N+LL S + KL DFG+A ++G G V +GT + A
Sbjct: 145 YCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGL---VAGGRVGTPHFMA 201
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLTG 296
PE + DV+ GV+L LL+G
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 31 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 139
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 140 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR--- 192
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 193 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 48 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 98
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 99 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 156
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 157 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR--- 209
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 210 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 19/207 (9%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL----DIEGLQGHREWLAEVIFLGQLRHP 154
+GEG +GTV K + + VA+K + D EG+ L E+ L +L+H
Sbjct: 10 IGEGTYGTVFKA------KNRETHEIVALKRVRLDDDDEGVPSSA--LREICLLKELKHK 61
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
++VRL D++ LV+EF + L+ + F + L KGL F H
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQ-DLKKY-FDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
V++RD K N+L++ + KL+DFGLA+ G + + T Y P+ +
Sbjct: 120 RN--VLHRDLKPQNLLINRNGELKLADFGLARAF--GIPVRCYSAEVVTLWYRPPDVLFG 175
Query: 275 GHL-TTKSDVYSFGVVLLELLTGRRSM 300
L +T D++S G + EL R +
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 31 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 81
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 139
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 140 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 192
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 193 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 103/244 (42%), Gaps = 49/244 (20%)
Query: 89 ITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVI 146
+ N+ +L+G G +G V+ Y + + VA+K ++ E L + L E+
Sbjct: 24 VPDNYIIKHLIGRGSYGYVYLAYDKN------TEKNVAIKKVNRMFEDLIDCKRILREIT 77
Query: 147 FLGQLRHPHLVRLIGYCCEDE-----ERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKI 201
L +L+ +++RL D+ E +V E S LFK + L I
Sbjct: 78 ILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIA--DSDLKKLFKT-PIFLTEEHIKTI 134
Query: 202 AIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKM-------------- 247
G F+H E+ +I+RD K +N LL+ D + K+ DFGLA+
Sbjct: 135 LYNLLLGENFIH--ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLE 192
Query: 248 -----GPEGSN------THVTTRVMGTYGYAAPEYISTGHLTTKS-DVYSFGVVLLELLT 295
GP N +HV TR Y APE I TKS D++S G + ELL
Sbjct: 193 ENEEPGPHNKNLKKQLTSHVVTR-----WYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
Query: 296 GRRS 299
+S
Sbjct: 248 MLQS 251
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 142 LAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVS-LPWGTRLK 200
L EV L L HP++++L + + LV E G L + + R+ + + +K
Sbjct: 84 LEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIK 143
Query: 201 IAIGAAKGLAFLHGAENPVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNTHVT 257
+ G+ +LH ++ +++RD K N+LL+S D K+ DFGL+ + N
Sbjct: 144 QVLS---GVTYLH--KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF---ENQKKM 195
Query: 258 TRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+GT Y APE + + K DV+S GV+L LL G
Sbjct: 196 KERLGTAYYIAPEVLRKKY-DEKCDVWSIGVILFILLAG 233
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 101/229 (44%), Gaps = 36/229 (15%)
Query: 92 NFSSNYLLGEGGFGTVH--KGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE-WLAEVIFL 148
+F LG GGFG V K +DD A+K + + + RE + EV L
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDD--------CNYAIKRIRLPNRELAREKVMREVKAL 57
Query: 149 GQLRHPHLVRLIGYCCEDE--ERLL-----VYEFMP-----RGSLENHLFKRISVS-LPW 195
+L HP +VR E E+L VY ++ + +L++ + R ++
Sbjct: 58 AKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERER 117
Query: 196 GTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGL--AKMGPEGSN 253
L I + A+ + FLH +++RD K SNI D K+ DFGL A E
Sbjct: 118 SVCLHIFLQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 175
Query: 254 THVT--------TRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELL 294
T +T T +GT Y +PE I + K D++S G++L ELL
Sbjct: 176 TVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 102/238 (42%), Gaps = 34/238 (14%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGH--REWLAEVIFLGQLRHPHL 156
+G+G F V R L + VAVK++D L ++ EV L HP++
Sbjct: 22 IGKGNFAKVKLA------RHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNI 75
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK------GLA 210
V+L ++ LV E+ G + ++L R K AK +
Sbjct: 76 VKLFEVIETEKTLYLVXEYASGGEVFDYLVAH--------GRXKEKEARAKFRQIVSAVQ 127
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE 270
+ H + +++RD K N+LLD+D K++DFG + G+ G YAAPE
Sbjct: 128 YCH--QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPE 182
Query: 271 -YISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRY 327
+ + + DV+S GV+L L++G D QNL + + LR R+ +
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG------QNLKELRERVLRGKYRIPF 234
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 98/201 (48%), Gaps = 14/201 (6%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR-EWLAEVIFLGQLRHPHLV 157
LGEG + TV+KG + L VA+K + +E +G + EV L L+H ++V
Sbjct: 10 LGEGTYATVYKG------KSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIV 63
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAEN 217
L ++ LV+E++ + L+ +L ++ +L +GLA+ H
Sbjct: 64 TLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKL-FLFQLLRGLAYCH--RQ 119
Query: 218 PVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE-YISTGH 276
V++RD K N+L++ KL+DFGLA+ + T+ V T Y P+ + +
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILLGSTD 177
Query: 277 LTTKSDVYSFGVVLLELLTGR 297
+T+ D++ G + E+ TGR
Sbjct: 178 YSTQIDMWGVGCIFYEMATGR 198
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 80/176 (45%), Gaps = 17/176 (9%)
Query: 199 LKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTT 258
+ + A+G+ FL + I+RD NILL + K+ DFGLA+ + +
Sbjct: 202 ISYSFQVARGMEFL--SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKG 259
Query: 259 RVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPY 318
+ APE I +TKSDV+S+GV+L E+ + S P + +
Sbjct: 260 DTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGS-----PYPGVQMDEDFCSR 314
Query: 319 LRSSRRLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLL 374
LR R+R A +YS E+ + L C +PK+RP+ A +V L LL
Sbjct: 315 LREGMRMR-------APEYST---PEIYQIMLDCWHRDPKERPRFAELVEKLGDLL 360
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 25 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKSQKLTDDHVQFLIYQ 133
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGL + + +V TR
Sbjct: 134 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR--- 186
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 19/220 (8%)
Query: 89 ITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD-IEGLQGHREWLAEVIF 147
I+ +F LLGEG +G V + VA+K ++ + L E+
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSA------THKPTGEIVAIKKIEPFDKPLFALRTLREIKI 62
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAI-GAA 206
L +H +++ + D ++ + ++ L + IS + ++ I
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL 122
Query: 207 KGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGS--NTHVT------T 258
+ + LHG+ VI+RD K SN+L++S+ K+ DFGLA++ E + N+ T T
Sbjct: 123 RAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 259 RVMGTYGYAAPEYISTGHLTTKS-DVYSFGVVLLELLTGR 297
+ T Y APE + T +++ DV+S G +L EL R
Sbjct: 181 EXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 25 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 133
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + V TR
Sbjct: 134 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATR--- 186
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 19/220 (8%)
Query: 89 ITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD-IEGLQGHREWLAEVIF 147
I+ +F LLGEG +G V + VA+K ++ + L E+
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSA------THKPTGEIVAIKKIEPFDKPLFALRTLREIKI 62
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAI-GAA 206
L +H +++ + D ++ + ++ L + IS + ++ I
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL 122
Query: 207 KGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGS--NTHVT------T 258
+ + LHG+ VI+RD K SN+L++S+ K+ DFGLA++ E + N+ T T
Sbjct: 123 RAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 259 RVMGTYGYAAPEYISTGHLTTKS-DVYSFGVVLLELLTGR 297
+ T Y APE + T +++ DV+S G +L EL R
Sbjct: 181 EYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 103/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 25 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 133
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ D+GLA+ + +V TR
Sbjct: 134 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR--- 186
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 14/220 (6%)
Query: 80 DFQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR 139
+F ++ + N+ LG+G F V + + A+ + K L Q
Sbjct: 18 EFMMNASTKFSDNYDVKEELGKGAFSVVRRC-VHKTTGLEFAAKIINTKKLSARDFQKLE 76
Query: 140 EWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRL 199
E +L+HP++VRL E+ LV++ + G L + R S +
Sbjct: 77 R---EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHC 133
Query: 200 KIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDF---TAKLSDFGLAKMGPEGSNTHV 256
I + +A+ H N +++R+ K N+LL S KL+DFGLA E +++
Sbjct: 134 IQQI--LESIAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLA---IEVNDSEA 186
Query: 257 TTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
GT GY +PE + + D+++ GV+L LL G
Sbjct: 187 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 89/203 (43%), Gaps = 17/203 (8%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQG--HREWLAEVIFLGQLRHPHL 156
LG+G F V + + L Q A K+++ + L H++ E L+HP++
Sbjct: 30 LGKGAFSVVRRCV------KVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
VRL E+ L+++ + G L + R S + I A LH +
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEA----VLHCHQ 139
Query: 217 NPVIYRDFKTSNILLDSDF---TAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIS 273
V++RD K N+LL S KL+DFGLA + EG GT GY +PE +
Sbjct: 140 MGVVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQ-QAWFGFAGTPGYLSPEVLR 197
Query: 274 TGHLTTKSDVYSFGVVLLELLTG 296
D+++ GV+L LL G
Sbjct: 198 KDPYGKPVDLWACGVILYILLVG 220
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 99/217 (45%), Gaps = 23/217 (10%)
Query: 91 QNFSSNYLLGEGGFGTVH-----KGYIDDDL--RQGLKAQAVAVKLLDIEGLQGHREWLA 143
+NF +LG G +G V G+ L + LK + K E + R+ L
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
+ + P LV L Y + E +L L+ +++ G L HL +R + ++I
Sbjct: 114 HI-----RQSPFLVTL-HYAFQTETKLHLILDYINGGELFTHLSQRERFT---EHEVQIY 164
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
+G LA H + +IYRD K NILLDS+ L+DFGL+K T G
Sbjct: 165 VGEIV-LALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV-ADETERAYDFCG 222
Query: 263 TYGYAAPEYI---STGHLTTKSDVYSFGVVLLELLTG 296
T Y AP+ + +GH D +S GV++ ELLTG
Sbjct: 223 TIEYMAPDIVRGGDSGH-DKAVDWWSLGVLMYELLTG 258
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 90/204 (44%), Gaps = 21/204 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVK-LLDIEGLQGHREW-LAEVIFLGQLRHPHL 156
+GEG +G V K R Q VA+K L+ E ++ L E+ L QL+HP+L
Sbjct: 11 IGEGSYGVVFK------CRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNL 64
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
V L+ LV+E+ L H R +P I + + F H +
Sbjct: 65 VNLLEVFRRKRRLHLVFEYCDHTVL--HELDRYQRGVPEHLVKSITWQTLQAVNFCH--K 120
Query: 217 NPVIYRDFKTSNILLDSDFTAKLSDFGLAKM--GP-EGSNTHVTTRVMGTYGYAAPE-YI 272
+ I+RD K NIL+ KL DFG A++ GP + + V TR Y +PE +
Sbjct: 121 HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATR-----WYRSPELLV 175
Query: 273 STGHLTTKSDVYSFGVVLLELLTG 296
DV++ G V ELL+G
Sbjct: 176 GDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 17/212 (8%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGL-QGHREWL-AEVIFL 148
+++ Y +G G +G K +R+ + + K LD + + ++ L +EV L
Sbjct: 6 EDYEVLYTIGTGSYGRCQK------IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLL 59
Query: 149 GQLRHPHLVRLIGYCCE--DEERLLVYEFMPRGSLENHLFK--RISVSLPWGTRLKIAIG 204
+L+HP++VR + + +V E+ G L + + K + L L++
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 205 AAKGLAFLH---GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVM 261
L H + V++RD K +N+ LD KL DFGLA++ +T +
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSFAKTFV 177
Query: 262 GTYGYAAPEYISTGHLTTKSDVYSFGVVLLEL 293
GT Y +PE ++ KSD++S G +L EL
Sbjct: 178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 99/236 (41%), Gaps = 50/236 (21%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE-----WLAEVI 146
+F +LG+G FG V K R L ++ A+K + H E L+EV+
Sbjct: 7 DFEEIAVLGQGAFGQVVKA------RNALDSRYYAIKKI------RHTEEKLSTILSEVM 54
Query: 147 FLGQLRHPHLVRLIGYCCEDEERLLVYE----------FMPRGSLENH----LFKRISVS 192
L L H ++VR Y E R V F+ EN L +++
Sbjct: 55 LLASLNHQYVVRY--YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLN 112
Query: 193 LPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK------ 246
++ + L+++H +I+RD K NI +D K+ DFGLAK
Sbjct: 113 QQRDEYWRLFRQILEALSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 247 -------MGPEGSNTHVTTRVMGTYGYAAPEYIS-TGHLTTKSDVYSFGVVLLELL 294
GS+ ++T+ + GT Y A E + TGH K D+YS G++ E++
Sbjct: 171 DILKLDSQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 104/244 (42%), Gaps = 52/244 (21%)
Query: 89 ITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVI 146
I + +L+G G +G V + Y L+ + VA+K L E L + L E+
Sbjct: 51 IPDRYEIRHLIGTGSYGHVCEAY------DKLEKRVVAIKKILRVFEDLIDCKRILREIA 104
Query: 147 FLGQLRHPHLVRLIGYCC-EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAI-- 203
L +L H H+V+++ +D E+ E + + FK++ + + T L I
Sbjct: 105 ILNRLNHDHVVKVLDIVIPKDVEKF--DELYVVLEIADSDFKKLFRTPVYLTELHIKTLL 162
Query: 204 -GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKM--GPEGSNT------ 254
G+ ++H A +++RD K +N L++ D + K+ DFGLA+ PE N+
Sbjct: 163 YNLLVGVKYVHSAG--ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISP 220
Query: 255 ----------------------HVTTRVMGTYGYAAPEYISTGHLTTKS-DVYSFGVVLL 291
HV TR Y APE I T++ DV+S G +
Sbjct: 221 REDDMNLVTFPHTKNLKRQLTGHVVTR-----WYRAPELILLQENYTEAIDVWSIGCIFA 275
Query: 292 ELLT 295
ELL
Sbjct: 276 ELLN 279
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL------DIEGLQGHREWLAEVIFLGQLR 152
+G G +G+V D R G K VA+K L +I + +RE ++ L ++
Sbjct: 32 VGSGAYGSVCSAI---DKRSGEK---VAIKKLSRPFQSEIFAKRAYRE----LLLLKHMQ 81
Query: 153 HPHLVRLIGYCCEDEERLLVYEF---MPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL 209
H +++ L+ Y+F MP ++ L K + + + KGL
Sbjct: 82 HENVIGLLDVFTPASSLRNFYDFYLVMP--FMQTDLQKIMGLKFSEEKIQYLVYQMLKGL 139
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAP 269
++H A V++RD K N+ ++ D K+ DFGLA+ +V TR Y AP
Sbjct: 140 KYIHSA--GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAP 192
Query: 270 EYI-STGHLTTKSDVYSFGVVLLELLTGR 297
E I S H D++S G ++ E+LTG+
Sbjct: 193 EVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 99/219 (45%), Gaps = 29/219 (13%)
Query: 89 ITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL------DIEGLQGHREWL 142
+ + + S +G G +G+V D R G K VA+K L +I + +RE
Sbjct: 40 LPKTYVSPTHVGSGAYGSVCSAI---DKRSGEK---VAIKKLSRPFQSEIFAKRAYRE-- 91
Query: 143 AEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEF---MPRGSLENHLFKRISVSLPWGTRL 199
++ L ++H +++ L+ Y+F MP ++ L K + +
Sbjct: 92 --LLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMP--FMQTDLQKIMGMEFSEEKIQ 147
Query: 200 KIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTR 259
+ KGL ++H A V++RD K N+ ++ D K+ DFGLA+ +V TR
Sbjct: 148 YLVYQMLKGLKYIHSA--GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR 205
Query: 260 VMGTYGYAAPEYI-STGHLTTKSDVYSFGVVLLELLTGR 297
Y APE I S H D++S G ++ E+LTG+
Sbjct: 206 -----WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 22/204 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG VH+ + + K ++ E+ + QL HP L+
Sbjct: 59 LGSGAFGVVHR------CVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLIN 112
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVS---LPWGTRLKIAIGAAKGLAFLHGA 215
L + E +L+ EF+ G LF RI+ + + A +GL +H
Sbjct: 113 LHDAFEDKYEMVLILEFLSGGE----LFDRIAAEDYKMSEAEVINYMRQACEGLKHMH-- 166
Query: 216 ENPVIYRDFKTSNILLDSD--FTAKLSDFGLA-KMGPEGSNTHVTTRVMGTYGYAAPEYI 272
E+ +++ D K NI+ ++ + K+ DFGLA K+ P+ + T +AAPE +
Sbjct: 167 EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD----EIVKVTTATAEFAAPEIV 222
Query: 273 STGHLTTKSDVYSFGVVLLELLTG 296
+ +D+++ GV+ LL+G
Sbjct: 223 DREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 17/212 (8%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGL-QGHREWL-AEVIFL 148
+++ Y +G G +G K +R+ + + K LD + + ++ L +EV L
Sbjct: 6 EDYEVLYTIGTGSYGRCQK------IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLL 59
Query: 149 GQLRHPHLVRLIGYCCE--DEERLLVYEFMPRGSLENHLFK--RISVSLPWGTRLKIAIG 204
+L+HP++VR + + +V E+ G L + + K + L L++
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 205 AAKGLAFLH---GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVM 261
L H + V++RD K +N+ LD KL DFGLA++ +T +
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDTSFAKAFV 177
Query: 262 GTYGYAAPEYISTGHLTTKSDVYSFGVVLLEL 293
GT Y +PE ++ KSD++S G +L EL
Sbjct: 178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 207 KGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGY 266
+GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 188
Query: 267 AAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
APE ++ H D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 207 KGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGY 266
+GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 146 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 198
Query: 267 AAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
APE ++ H D++S G ++ ELLTGR
Sbjct: 199 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 34/214 (15%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLV 157
+LG+G +G V+ G DL ++ +A+K + + + E+ L+H ++V
Sbjct: 29 VLGKGTYGIVYAG---RDLSNQVR---IAIKEIPERDSRYSQPLHEEIALHKHLKHKNIV 82
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWG--TRLKIAIG-----AAKGLA 210
+ +G E+ + E +P GSL L + WG + IG +GL
Sbjct: 83 QYLGSFSENGFIKIFMEQVPGGSLSALLRSK------WGPLKDNEQTIGFYTKQILEGLK 136
Query: 211 FLHGAENPVIYRDFKTSNILLDS-DFTAKLSDFG----LAKMGPEGSNTHVTTRVMGTYG 265
+LH +N +++RD K N+L+++ K+SDFG LA + P T GT
Sbjct: 137 YLH--DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP------CTETFTGTLQ 188
Query: 266 YAAPEYISTG--HLTTKSDVYSFGVVLLELLTGR 297
Y APE I G +D++S G ++E+ TG+
Sbjct: 189 YMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 207 KGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGY 266
+GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 142 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 194
Query: 267 AAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
APE ++ H D++S G ++ ELLTGR
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + G + VAVK L + + + E+ L
Sbjct: 21 QNLSP---VGSGAYGSVCAAF---DTKTGHR---VAVKKLSRPFQSIIHAKRTYRELRLL 71
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCAKLTDDHVQFLIYQ 129
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR
Sbjct: 130 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 182
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 183 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 207 KGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGY 266
+GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 155 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 207
Query: 267 AAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
APE ++ H D++S G ++ ELLTGR
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 207 KGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGY 266
+GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 156 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 208
Query: 267 AAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
APE ++ H D++S G ++ ELLTGR
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 207 KGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGY 266
+GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + +V TR Y
Sbjct: 132 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WY 184
Query: 267 AAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
APE ++ H D++S G ++ ELLTGR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 11/162 (6%)
Query: 138 HREWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGT 197
H E E+ L L HP++++L + + LV EF G L + R
Sbjct: 90 HEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA 149
Query: 198 RLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSD---FTAKLSDFGLAKMGPEGSNT 254
+ I + G+ +LH ++ +++RD K NILL++ K+ DFGL+ S
Sbjct: 150 NIMKQILS--GICYLH--KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSF---FSKD 202
Query: 255 HVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+ +GT Y APE + + K DV+S GV++ LL G
Sbjct: 203 YKLRDRLGTAYYIAPEVLKKKY-NEKCDVWSCGVIMYILLCG 243
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 19/220 (8%)
Query: 89 ITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD-IEGLQGHREWLAEVIF 147
I+ +F LLGEG +G V + VA+K ++ + L E+
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSA------THKPTGEIVAIKKIEPFDKPLFALRTLREIKI 62
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAI-GAA 206
L +H +++ + D ++ + ++ L + IS + ++ I
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL 122
Query: 207 KGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGS--NTHVT------T 258
+ + LHG+ VI+RD K SN+L++S+ K+ DFGLA++ E + N+ T
Sbjct: 123 RAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMV 180
Query: 259 RVMGTYGYAAPEYISTGHLTTKS-DVYSFGVVLLELLTGR 297
+ T Y APE + T +++ DV+S G +L EL R
Sbjct: 181 EFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 18/214 (8%)
Query: 90 TQNFSSNY----LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEV 145
+ FS NY LG+G F V + + A+ + K L Q E
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRC-VHKTTGLEFAAKIINTKKLSARDFQKLER---EA 56
Query: 146 IFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGA 205
+L+HP++VRL E+ LV++ + G L + R S + I
Sbjct: 57 RICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI-- 114
Query: 206 AKGLAFLHGAENPVIYRDFKTSNILLDSDF---TAKLSDFGLAKMGPEGSNTHVTTRVMG 262
+ +A+ H N +++R+ K N+LL S KL+DFGLA E +++ G
Sbjct: 115 LESIAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAG 169
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
T GY +PE + + D+++ GV+L LL G
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 92/211 (43%), Gaps = 18/211 (8%)
Query: 93 FSSNY----LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFL 148
FS NY LG+G F V + + A+ + K L Q E
Sbjct: 3 FSDNYDVKEELGKGAFSVVRRC-VHKTTGLEFAAKIINTKKLSARDFQKLER---EARIC 58
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
+L+HP++VRL E+ LV++ + G L + R S + I +
Sbjct: 59 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI--LES 116
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDF---TAKLSDFGLAKMGPEGSNTHVTTRVMGTYG 265
+A+ H N +++R+ K N+LL S KL+DFGLA E +++ GT G
Sbjct: 117 IAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPG 171
Query: 266 YAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
Y +PE + + D+++ GV+L LL G
Sbjct: 172 YLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 19/207 (9%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL----DIEGLQGHREWLAEVIFLGQLRHP 154
+GEG +GTV K + + VA+K + D EG+ L E+ L +L+H
Sbjct: 10 IGEGTYGTVFKA------KNRETHEIVALKRVRLDDDDEGVPSSA--LREICLLKELKHK 61
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
++VRL D++ LV+EF + L+ + F + L KGL F H
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQ-DLKKY-FDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
V++RD K N+L++ + KL++FGLA+ G + + T Y P+ +
Sbjct: 120 RN--VLHRDLKPQNLLINRNGELKLANFGLARAF--GIPVRCYSAEVVTLWYRPPDVLFG 175
Query: 275 GHL-TTKSDVYSFGVVLLELLTGRRSM 300
L +T D++S G + EL R +
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 93/214 (43%), Gaps = 18/214 (8%)
Query: 90 TQNFSSNY----LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEV 145
+ FS NY LG+G F V + + A+ + K L Q E
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRC-VHKTTGLEFAAKIINTKKLSARDFQKLER---EA 56
Query: 146 IFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGA 205
+L+HP++VRL E+ LV++ + G L + R S + I
Sbjct: 57 RICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI-- 114
Query: 206 AKGLAFLHGAENPVIYRDFKTSNILLDSDF---TAKLSDFGLAKMGPEGSNTHVTTRVMG 262
+ +A+ H N +++R+ K N+LL S KL+DFGLA E +++ G
Sbjct: 115 LESIAYCHS--NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAG 169
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
T GY +PE + + D+++ GV+L LL G
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 91/203 (44%), Gaps = 22/203 (10%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V HK + + L Q V VKL IE + L V F P
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------P 101
Query: 155 HLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLH 213
LV+L Y +D L +V E++P G + +HL + S P I +LH
Sbjct: 102 FLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLH 158
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIS 273
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I
Sbjct: 159 SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIIL 211
Query: 274 TGHLTTKSDVYSFGVVLLELLTG 296
+ D ++ GV++ E+ G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 91/203 (44%), Gaps = 22/203 (10%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V HK + + L Q V VKL IE + L V F P
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------P 101
Query: 155 HLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLH 213
LV+L Y +D L +V E++P G + +HL + S P I +LH
Sbjct: 102 FLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLH 158
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIS 273
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I
Sbjct: 159 SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIIL 211
Query: 274 TGHLTTKSDVYSFGVVLLELLTG 296
+ D ++ GV++ E+ G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 91/203 (44%), Gaps = 22/203 (10%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V HK + + L Q V VKL IE + L V F P
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------P 101
Query: 155 HLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLH 213
LV+L Y +D L +V E++P G + +HL + S P I +LH
Sbjct: 102 FLVKL-EYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLH 158
Query: 214 GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIS 273
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I
Sbjct: 159 SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIIL 211
Query: 274 TGHLTTKSDVYSFGVVLLELLTG 296
+ D ++ GV++ E+ G
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 17/212 (8%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGL-QGHREWL-AEVIFL 148
+++ Y +G G +G K +R+ + + K LD + + ++ L +EV L
Sbjct: 6 EDYEVLYTIGTGSYGRCQK------IRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLL 59
Query: 149 GQLRHPHLVRLIGYCCE--DEERLLVYEFMPRGSLENHLFK--RISVSLPWGTRLKIAIG 204
+L+HP++VR + + +V E+ G L + + K + L L++
Sbjct: 60 RELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 205 AAKGLAFLH---GAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVM 261
L H + V++RD K +N+ LD KL DFGLA++ + +
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL--NHDEDFAKEFV 177
Query: 262 GTYGYAAPEYISTGHLTTKSDVYSFGVVLLEL 293
GT Y +PE ++ KSD++S G +L EL
Sbjct: 178 GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 25 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 133
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ FGLA+ + +V TR
Sbjct: 134 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR--- 186
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 25 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 133
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ D GLA+ + +V TR
Sbjct: 134 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR--- 186
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 34/214 (15%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLV 157
+LG+G +G V+ G DL ++ +A+K + + + E+ L+H ++V
Sbjct: 15 VLGKGTYGIVYAG---RDLSNQVR---IAIKEIPERDSRYSQPLHEEIALHKHLKHKNIV 68
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWG--TRLKIAIG-----AAKGLA 210
+ +G E+ + E +P GSL L + WG + IG +GL
Sbjct: 69 QYLGSFSENGFIKIFMEQVPGGSLSALLRSK------WGPLKDNEQTIGFYTKQILEGLK 122
Query: 211 FLHGAENPVIYRDFKTSNILLDS-DFTAKLSDFG----LAKMGPEGSNTHVTTRVMGTYG 265
+LH +N +++RD K N+L+++ K+SDFG LA + P T GT
Sbjct: 123 YLH--DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP------CTETFTGTLQ 174
Query: 266 YAAPEYISTG--HLTTKSDVYSFGVVLLELLTGR 297
Y APE I G +D++S G ++E+ TG+
Sbjct: 175 YMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V HK + + L Q V VKL IE + L V F P
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------P 94
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
LV+L ++ +V E++P G + +HL +RI R A +LH
Sbjct: 95 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFXEPHARF-YAAQIVLTFEYLHS 152
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 153 LD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILS 205
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 206 KGYNKAVDWWALGVLIYEMAAG 227
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 30/219 (13%)
Query: 93 FSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLR 152
F + G+G FGTV G ++ +VA+K + I+ + L + L L
Sbjct: 25 FQVERMAGQGTFGTVQLG------KEKSTGMSVAIKKV-IQDPRFRNRELQIMQDLAVLH 77
Query: 153 HPHLVRLIGYCCEDEER-------LLVYEFMP---RGSLENHLFKRISVSLPWGTRLKIA 202
HP++V+L Y ER +V E++P N+ ++++ P +K+
Sbjct: 78 HPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVA---PPPILIKVF 134
Query: 203 I-GAAKGLAFLHGAENPVIYRDFKTSNILL-DSDFTAKLSDFGLAK-MGPEGSNT-HVTT 258
+ + + LH V +RD K N+L+ ++D T KL DFG AK + P N ++ +
Sbjct: 135 LFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICS 194
Query: 259 RVMGTYGYAAPEYI-STGHLTTKSDVYSFGVVLLELLTG 296
R Y APE I H TT D++S G + E++ G
Sbjct: 195 RY-----YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 118/275 (42%), Gaps = 33/275 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWL-AEVIFLGQLRHPHLV 157
LG G FG VH + ++ GL+ +K ++ + Q E + AE+ L L HP+++
Sbjct: 30 LGSGAFGDVH---LVEERSSGLER---VIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHLFKRIS--VSLPWGTRLKIAIGAAKGLAFLHGA 215
++ + +V E G L + + +L G ++ LA+ H
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 216 ENPVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYI 272
V+++D K NIL K+ DFGLA++ S+ H +T GT Y APE
Sbjct: 144 H--VVHKDLKPENILFQDTSPHSPIKIIDFGLAELF--KSDEH-STNAAGTALYMAPEVF 198
Query: 273 STGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPR 332
+T K D++S GVV+ LLTG + Q + +P Y V+ R
Sbjct: 199 KRD-VTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEP--------NYAVECR 249
Query: 333 LAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVV 367
+V K+M ++ +P+ RP A V+
Sbjct: 250 PLTPQAVDLLKQM-------LTKDPERRPSAAQVL 277
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 142 LAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVS-LPWGTRLK 200
L EV L QL HP++++L + + LV E G L + + R S + +K
Sbjct: 52 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK 111
Query: 201 IAIGAAKGLAFLHGAENPVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNTHVT 257
+ G +LH ++ +++RD K N+LL+S D K+ DFGL+ G
Sbjct: 112 QVLS---GTTYLH--KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK---M 163
Query: 258 TRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+GT Y APE + + K DV+S GV+L LL G
Sbjct: 164 KERLGTAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCG 201
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 88/201 (43%), Gaps = 18/201 (8%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD---IEGLQGHREWLAEVIFLGQLRHPH 155
+G G FG V ++ A+K+LD + L+ L E L + P
Sbjct: 49 IGTGSFGRVML------VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
LV+L ++ +V E+MP G + +HL + S P I +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHSL 160
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTG 275
+ +IYRD K N+L+D K++DFG AK +G T + GT Y APE I +
Sbjct: 161 D--LIYRDLKPENLLIDQQGYIKVADFGFAKR-VKGR----TWXLCGTPEYLAPEIILSK 213
Query: 276 HLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 25 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 133
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ D GLA+ + +V TR
Sbjct: 134 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR--- 186
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 88/201 (43%), Gaps = 18/201 (8%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD---IEGLQGHREWLAEVIFLGQLRHPH 155
+G G FG V ++ A+K+LD + L+ L E L + P
Sbjct: 49 IGTGSFGRVML------VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
LV+L ++ +V E+MP G + +HL + S P I +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHSL 160
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTG 275
+ +IYRD K N+L+D K++DFG AK +G T + GT Y APE I +
Sbjct: 161 D--LIYRDLKPENLLIDQQGYIKVADFGFAKR-VKGR----TWXLCGTPEYLAPEIILSK 213
Query: 276 HLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 207 KGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGY 266
+GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + V TR Y
Sbjct: 156 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR-----WY 208
Query: 267 AAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
APE ++ H D++S G ++ ELLTGR
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V HK + + L Q V VKL IE + L V F P
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------P 102
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
LV+L ++ +V E++P G + +HL + S P I +LH
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHS 160
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 161 LD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILS 213
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAG 235
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 207 KGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGY 266
+GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + V TR Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WY 188
Query: 267 AAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
APE ++ H D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V HK + + L Q V VKL IE + L V F P
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------P 94
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
LV+L ++ +V E++P G + +HL + S P I +LH
Sbjct: 95 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHS 152
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 153 LD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILS 205
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 206 KGYNKAVDWWALGVLIYEMAAG 227
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V HK + + L Q V VKL IE + L V F P
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------P 122
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
LV+L ++ +V E++P G + +HL + S P I +LH
Sbjct: 123 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHS 180
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 181 LD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILS 233
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 234 KGYNKAVDWWALGVLIYEMAAG 255
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 207 KGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGY 266
+GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + V TR Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WY 188
Query: 267 AAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
APE ++ H D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 29/216 (13%)
Query: 91 QNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFL 148
QN S +G G +G+V + D + GL+ VAVK L + + + E+ L
Sbjct: 25 QNLSP---VGSGAYGSVCAAF---DTKTGLR---VAVKKLSRPFQSIIHAKRTYRELRLL 75
Query: 149 GQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
++H +++ L+ E + LV M G+ N++ K ++ L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQ 133
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
I +GL ++H A+ +I+RD K SN+ ++ D K+ D GLA+ + +V TR
Sbjct: 134 I--LRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR--- 186
Query: 263 TYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
Y APE ++ H D++S G ++ ELLTGR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V HK + + L Q V VKL IE + L V F P
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------P 102
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
LV+L ++ +V E++P G + +HL + S P I +LH
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHS 160
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 161 LD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILS 213
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAG 235
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V HK + + L Q V VKL IE + L V F P
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------P 102
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
LV+L ++ +V E++P G + +HL + S P I +LH
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHS 160
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 161 LD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILS 213
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAG 235
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 104/247 (42%), Gaps = 52/247 (21%)
Query: 89 ITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVI 146
+ N+ +L+G G +G V+ Y D + + VA+K ++ E L + L E+
Sbjct: 26 VPDNYEIKHLIGRGSYGYVYLAY-DKNANKN-----VAIKKVNRMFEDLIDCKRILREIT 79
Query: 147 FLGQLRHPHLVRLIGYCC-ED----EERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKI 201
L +L+ +++RL ED +E +V E S LFK + L I
Sbjct: 80 ILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIA--DSDLKKLFKT-PIFLTEQHVKTI 136
Query: 202 AIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKM-------------- 247
G F+H E+ +I+RD K +N LL+ D + K+ DFGLA+
Sbjct: 137 LYNLLLGEKFIH--ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLE 194
Query: 248 --------GPEGSN------THVTTRVMGTYGYAAPEYISTGHLTTKS-DVYSFGVVLLE 292
GP N +HV TR Y APE I T S D++S G + E
Sbjct: 195 EKEENEEPGPHNKNLKKQLTSHVVTR-----WYRAPELILLQENYTNSIDIWSTGCIFAE 249
Query: 293 LLTGRRS 299
LL +S
Sbjct: 250 LLNMMKS 256
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V HK + + L Q V VKL IE + L V F P
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------P 102
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
LV+L ++ +V E+ P G + +HL + S P I +LH
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHS 160
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K N+++D K++DFG AK +G T + GT Y APE I +
Sbjct: 161 LD--LIYRDLKPENLMIDQQGYIKVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILS 213
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAG 235
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 89/202 (44%), Gaps = 16/202 (7%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G +G V + D G + +K + L EV L QL HP++++
Sbjct: 29 LGSGAYGEV---LLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMK 85
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVS-LPWGTRLKIAIGAAKGLAFLHGAEN 217
L + + LV E G L + + R S + +K + G +LH ++
Sbjct: 86 LYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS---GTTYLH--KH 140
Query: 218 PVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+++RD K N+LL+S D K+ DFGL+ G +GT Y APE +
Sbjct: 141 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK---MKERLGTAYYIAPEVLRK 197
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
+ K DV+S GV+L LL G
Sbjct: 198 KY-DEKCDVWSCGVILYILLCG 218
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG VH+ D + G + AVK + +E + + E++ L P +V
Sbjct: 80 LGRGSFGEVHR---MKDKQTGFQC---AVKKVRLEVFR-----VEELVACAGLSSPRIVP 128
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L G E + E + GSL L K++ LP L A +GL +LH
Sbjct: 129 LYGAVREGPWVNIFMELLEGGSL-GQLIKQMGC-LPEDRALYYLGQALEGLEYLH--TRR 184
Query: 219 VIYRDFKTSNILLDSDFT-AKLSDFGLA-KMGPEGSNTHVTT--RVMGTYGYAAPEYIST 274
+++ D K N+LL SD + A L DFG A + P+G + T + GT + APE +
Sbjct: 185 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 244
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
K D++S ++L +L G
Sbjct: 245 KPCDAKVDIWSSCCMMLHMLNG 266
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 207 KGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGY 266
+GL ++H A+ +I+RD K SN+ ++ D K+ DFGLA+ + V TR Y
Sbjct: 132 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WY 184
Query: 267 AAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
APE ++ H D++S G ++ ELLTGR
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+++ ++G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQDKRFKNRELQIMRKL 104
Query: 152 RHPHLVRLIGYCC-----EDEERL-LVYEFMPRG--SLENHLFKRISVSLPWGTRLKIAI 203
H ++VRL + +DE L LV +++P + H + R +LP
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 163
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTA-KLSDFGLAKMGPEGSNTHVTTRVMG 262
+ LA++H + +RD K N+LLD D KL DFG AK G + +
Sbjct: 164 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICS 219
Query: 263 TYGYAAPEYI-STGHLTTKSDVYSFGVVLLELLTGR 297
Y Y APE I T+ DV+S G VL ELL G+
Sbjct: 220 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 30/218 (13%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+++ ++G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQDKRFKNRELQIMRKL 104
Query: 152 RHPHLVRLIGYCC-----EDEERL-LVYEFMPRG--SLENHLFKRISVSLPWGTRLKIAI 203
H ++VRL + +DE L LV +++P + H + R +LP
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 163
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTA-KLSDFGLAK--MGPEGSNTHVTTRV 260
+ LA++H + +RD K N+LLD D KL DFG AK + E + +++ +R
Sbjct: 164 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 221
Query: 261 MGTYGYAAPEYI-STGHLTTKSDVYSFGVVLLELLTGR 297
Y APE I T+ DV+S G VL ELL G+
Sbjct: 222 -----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V H + + L Q V VKL +IE + L V F P
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKV-VKLKEIEHTLNEKRILQAVNF------P 101
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
LV+L ++ +V E+ P G + +HL + S P I +LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHS 159
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K N+++D K++DFGLAK +G T + GT Y APE I +
Sbjct: 160 LD--LIYRDLKPENLMIDQQGYIKVTDFGLAKR-VKGR----TWXLCGTPEYLAPEIILS 212
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 30/218 (13%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+++ ++G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQDKRFKNRELQIMRKL 98
Query: 152 RHPHLVRLIGYCC-----EDEERL-LVYEFMPRG--SLENHLFKRISVSLPWGTRLKIAI 203
H ++VRL + +DE L LV +++P + H + R +LP
Sbjct: 99 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 157
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTA-KLSDFGLAK--MGPEGSNTHVTTRV 260
+ LA++H + +RD K N+LLD D KL DFG AK + E + +++ +R
Sbjct: 158 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 215
Query: 261 MGTYGYAAPEYI-STGHLTTKSDVYSFGVVLLELLTGR 297
Y APE I T+ DV+S G VL ELL G+
Sbjct: 216 -----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 19/207 (9%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQG---HREWLAEVIFLGQLRHP 154
+LG GGFG V + + + +L +G QG ++ LA+V H
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HS 244
Query: 155 HLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK---GLA 210
+ + Y E + L LV M G + H++ + P + A+ GL
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN-VDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE 270
LH + +IYRD K N+LLD D ++SD GLA G T GT G+ APE
Sbjct: 304 HLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPE 359
Query: 271 YISTGHLTTKSDVYSFGVVLLELLTGR 297
+ D ++ GV L E++ R
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+++ ++G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQDKRFKNRELQIMRKL 82
Query: 152 RHPHLVRLIGYCC-----EDEERL-LVYEFMPRG--SLENHLFKRISVSLPWGTRLKIAI 203
H ++VRL + +DE L LV +++P + H + R +LP
Sbjct: 83 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 141
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTA-KLSDFGLAKMGPEGSNTHVTTRVMG 262
+ LA++H + +RD K N+LLD D KL DFG AK G + +
Sbjct: 142 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICS 197
Query: 263 TYGYAAPEYI-STGHLTTKSDVYSFGVVLLELLTGR 297
Y Y APE I T+ DV+S G VL ELL G+
Sbjct: 198 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+++ ++G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIK----KVLQDKRFKNRELQIMRKL 89
Query: 152 RHPHLVRLIGYCC-----EDEERL-LVYEFMPRG--SLENHLFKRISVSLPWGTRLKIAI 203
H ++VRL + +DE L LV +++P + H + R +LP
Sbjct: 90 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 148
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTA-KLSDFGLAKMGPEGSNTHVTTRVMG 262
+ LA++H + +RD K N+LLD D KL DFG AK G + +
Sbjct: 149 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICS 204
Query: 263 TYGYAAPEYI-STGHLTTKSDVYSFGVVLLELLTGR 297
Y Y APE I T+ DV+S G VL ELL G+
Sbjct: 205 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+++ ++G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQDKRFKNRELQIMRKL 78
Query: 152 RHPHLVRLIGYCC-----EDEERL-LVYEFMPRG--SLENHLFKRISVSLPWGTRLKIAI 203
H ++VRL + +DE L LV +++P + H + R +LP
Sbjct: 79 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 137
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTA-KLSDFGLAKMGPEGSNTHVTTRVMG 262
+ LA++H + +RD K N+LLD D KL DFG AK G + +
Sbjct: 138 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICS 193
Query: 263 TYGYAAPEYI-STGHLTTKSDVYSFGVVLLELLTGR 297
Y Y APE I T+ DV+S G VL ELL G+
Sbjct: 194 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 19/207 (9%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQG---HREWLAEVIFLGQLRHP 154
+LG GGFG V + + + +L +G QG ++ LA+V H
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HS 244
Query: 155 HLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK---GLA 210
+ + Y E + L LV M G + H++ + P + A+ GL
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN-VDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE 270
LH + +IYRD K N+LLD D ++SD GLA G T GT G+ APE
Sbjct: 304 HLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPE 359
Query: 271 YISTGHLTTKSDVYSFGVVLLELLTGR 297
+ D ++ GV L E++ R
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 30/218 (13%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+++ ++G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQDKRFKNRELQIMRKL 106
Query: 152 RHPHLVRLIGYCC-----EDEERL-LVYEFMPRG--SLENHLFKRISVSLPWGTRLKIAI 203
H ++VRL + +DE L LV +++P + H + R +LP
Sbjct: 107 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 165
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTA-KLSDFGLAK--MGPEGSNTHVTTRV 260
+ LA++H + +RD K N+LLD D KL DFG AK + E + +++ +R
Sbjct: 166 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 223
Query: 261 MGTYGYAAPEYI-STGHLTTKSDVYSFGVVLLELLTGR 297
Y APE I T+ DV+S G VL ELL G+
Sbjct: 224 -----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 19/207 (9%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQG---HREWLAEVIFLGQLRHP 154
+LG GGFG V + + + +L +G QG ++ LA+V H
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HS 244
Query: 155 HLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK---GLA 210
+ + Y E + L LV M G + H++ + P + A+ GL
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN-VDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE 270
LH + +IYRD K N+LLD D ++SD GLA G T GT G+ APE
Sbjct: 304 HLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPE 359
Query: 271 YISTGHLTTKSDVYSFGVVLLELLTGR 297
+ D ++ GV L E++ R
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 19/207 (9%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQG---HREWLAEVIFLGQLRHP 154
+LG GGFG V + + + +L +G QG ++ LA+V H
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HS 244
Query: 155 HLVRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAK---GLA 210
+ + Y E + L LV M G + H++ + P + A+ GL
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYN-VDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE 270
LH + +IYRD K N+LLD D ++SD GLA G T GT G+ APE
Sbjct: 304 HLH--QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPE 359
Query: 271 YISTGHLTTKSDVYSFGVVLLELLTGR 297
+ D ++ GV L E++ R
Sbjct: 360 LLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 30/218 (13%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+++ ++G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQDKRFKNRELQIMRKL 108
Query: 152 RHPHLVRLIGYCCEDEERL------LVYEFMPRG--SLENHLFKRISVSLPWGTRLKIAI 203
H ++VRL + E+ LV +++P + H + R +LP
Sbjct: 109 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 167
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTA-KLSDFGLAK--MGPEGSNTHVTTRV 260
+ LA++H + +RD K N+LLD D KL DFG AK + E + +++ +R
Sbjct: 168 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 225
Query: 261 MGTYGYAAPEYI-STGHLTTKSDVYSFGVVLLELLTGR 297
Y APE I T+ DV+S G VL ELL G+
Sbjct: 226 -----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+++ ++G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQDKRFKNRELQIMRKL 82
Query: 152 RHPHLVRLIGYCC-----EDEERL-LVYEFMPRG--SLENHLFKRISVSLPWGTRLKIAI 203
H ++VRL + +DE L LV +++P + H + R +LP
Sbjct: 83 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 141
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTA-KLSDFGLAKMGPEGSNTHVTTRVMG 262
+ LA++H + +RD K N+LLD D KL DFG AK G + +
Sbjct: 142 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICS 197
Query: 263 TYGYAAPEYI-STGHLTTKSDVYSFGVVLLELLTGR 297
Y Y APE I T+ DV+S G VL ELL G+
Sbjct: 198 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 102/239 (42%), Gaps = 24/239 (10%)
Query: 89 ITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFL 148
I + F +LG G F V ++Q L + A+K + E+ L
Sbjct: 7 IRKTFIFMEVLGSGAFSEVFL------VKQRLTGKLFALKCIKKSPAFRDSSLENEIAVL 60
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKR-ISVSLPWGTRLKIAIGAAK 207
+++H ++V L LV + + G L + + +R + ++ + A K
Sbjct: 61 KKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVK 120
Query: 208 GLAFLHGAENPVIYRDFKTSNILL---DSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY 264
+LH EN +++RD K N+L + + ++DFGL+KM G + + GT
Sbjct: 121 ---YLH--ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMSTACGTP 171
Query: 265 GYAAPEYISTGHLTTKSDVYSFGVVLLELLTG-----RRSMDKLRPKSEQNLVDWAKPY 318
GY APE ++ + D +S GV+ LL G + KL K ++ ++ P+
Sbjct: 172 GYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPF 230
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 94/217 (43%), Gaps = 19/217 (8%)
Query: 91 QNFSSNY----LLGEGGFGTVHKGY-IDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEV 145
+ F + Y LLG+GGFGTV G+ + D L+ +K ++L L EV
Sbjct: 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRN-RVLGWSPLSDSVTCPLEV 85
Query: 146 IFLGQL----RHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKI 201
L ++ HP ++RL+ + E +LV E R LF I+ P G
Sbjct: 86 ALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLE---RPLPAQDLFDYITEKGPLGEGPSR 142
Query: 202 AIGAAKGLAFLHGAENPVIYRDFKTSNILLD-SDFTAKLSDFGLAKMGPEGSNTHVTTRV 260
A H V++RD K NIL+D AKL DFG + + T
Sbjct: 143 CFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGAL----LHDEPYTDF 198
Query: 261 MGTYGYAAPEYISTGHL-TTKSDVYSFGVVLLELLTG 296
GT Y+ PE+IS + V+S G++L +++ G
Sbjct: 199 DGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+++ ++G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDS------GELVAIK----KVLQDKRFKNRELQIMRKL 70
Query: 152 RHPHLVRLIGYCC-----EDEERL-LVYEFMPRG--SLENHLFKRISVSLPWGTRLKIAI 203
H ++VRL + +DE L LV +++P + H + R +LP
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 129
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTA-KLSDFGLAKMGPEGSNTHVTTRVMG 262
+ LA++H + +RD K N+LLD D KL DFG AK G + +
Sbjct: 130 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICS 185
Query: 263 TYGYAAPEYI-STGHLTTKSDVYSFGVVLLELLTGR 297
Y Y APE I T+ DV+S G VL ELL G+
Sbjct: 186 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 30/218 (13%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+++ ++G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQDKRFKNRELQIMRKL 75
Query: 152 RHPHLVRLIGYCC-----EDEERL-LVYEFMPRG--SLENHLFKRISVSLPWGTRLKIAI 203
H ++VRL + +DE L LV +++P + H + R +LP
Sbjct: 76 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 134
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTA-KLSDFGLAK--MGPEGSNTHVTTRV 260
+ LA++H + +RD K N+LLD D KL DFG AK + E + +++ +R
Sbjct: 135 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 192
Query: 261 MGTYGYAAPEYI-STGHLTTKSDVYSFGVVLLELLTGR 297
Y APE I T+ DV+S G VL ELL G+
Sbjct: 193 -----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+++ ++G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDS------GELVAIK----KVLQDKRFKNRELQIMRKL 70
Query: 152 RHPHLVRLIGYCC-----EDEERL-LVYEFMPRG--SLENHLFKRISVSLPWGTRLKIAI 203
H ++VRL + +DE L LV +++P + H + R +LP
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 129
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTA-KLSDFGLAKMGPEGSNTHVTTRVMG 262
+ LA++H + +RD K N+LLD D KL DFG AK G + +
Sbjct: 130 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICS 185
Query: 263 TYGYAAPEYI-STGHLTTKSDVYSFGVVLLELLTGR 297
Y Y APE I T+ DV+S G VL ELL G+
Sbjct: 186 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 30/218 (13%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+++ ++G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIK----KVLQDKRFKNRELQIMRKL 83
Query: 152 RHPHLVRLIGYCC-----EDEERL-LVYEFMPRG--SLENHLFKRISVSLPWGTRLKIAI 203
H ++VRL + +DE L LV +++P + H + R +LP
Sbjct: 84 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 142
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTA-KLSDFGLAK--MGPEGSNTHVTTRV 260
+ LA++H + +RD K N+LLD D KL DFG AK + E + +++ +R
Sbjct: 143 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 200
Query: 261 MGTYGYAAPEYI-STGHLTTKSDVYSFGVVLLELLTGR 297
Y APE I T+ DV+S G VL ELL G+
Sbjct: 201 -----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+++ ++G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDS------GELVAIK----KVLQDKRFKNRELQIMRKL 71
Query: 152 RHPHLVRLIGYCC-----EDEERL-LVYEFMPRG--SLENHLFKRISVSLPWGTRLKIAI 203
H ++VRL + +DE L LV +++P + H + R +LP
Sbjct: 72 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 130
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTA-KLSDFGLAKMGPEGSNTHVTTRVMG 262
+ LA++H + +RD K N+LLD D KL DFG AK G + +
Sbjct: 131 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICS 186
Query: 263 TYGYAAPEYI-STGHLTTKSDVYSFGVVLLELLTGR 297
Y Y APE I T+ DV+S G VL ELL G+
Sbjct: 187 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 30/218 (13%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+++ ++G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCD------SGELVAIKKV----LQDKRFKNRELQIMRKL 149
Query: 152 RHPHLVRLIGYCC-----EDEERL-LVYEFMPRG--SLENHLFKRISVSLPWGTRLKIAI 203
H ++VRL + +DE L LV +++P + H + R +LP
Sbjct: 150 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 208
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTA-KLSDFGLAK--MGPEGSNTHVTTRV 260
+ LA++H + +RD K N+LLD D KL DFG AK + E + +++ +R
Sbjct: 209 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 266
Query: 261 MGTYGYAAPEYI-STGHLTTKSDVYSFGVVLLELLTGR 297
Y APE I T+ DV+S G VL ELL G+
Sbjct: 267 -----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 30/218 (13%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+++ ++G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDS------GELVAIK----KVLQDKRFKNRELQIMRKL 70
Query: 152 RHPHLVRLIGYCC-----EDEERL-LVYEFMPRG--SLENHLFKRISVSLPWGTRLKIAI 203
H ++VRL + +DE L LV +++P + H + R +LP
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 129
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTA-KLSDFGLAK--MGPEGSNTHVTTRV 260
+ LA++H + +RD K N+LLD D KL DFG AK + E + +++ +R
Sbjct: 130 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 261 MGTYGYAAPEYI-STGHLTTKSDVYSFGVVLLELLTGR 297
Y APE I T+ DV+S G VL ELL G+
Sbjct: 188 -----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+G G FG VH+ D + G + AVK + +E + + E++ L P +V
Sbjct: 66 VGRGSFGEVHR---MKDKQTGFQC---AVKKVRLEVFR-----VEELVACAGLSSPRIVP 114
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L G E + E + GSL L K++ LP L A +GL +LH
Sbjct: 115 LYGAVREGPWVNIFMELLEGGSL-GQLIKQMGC-LPEDRALYYLGQALEGLEYLH--TRR 170
Query: 219 VIYRDFKTSNILLDSDFT-AKLSDFGLA-KMGPEGSNTHVTT--RVMGTYGYAAPEYIST 274
+++ D K N+LL SD + A L DFG A + P+G + T + GT + APE +
Sbjct: 171 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 230
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
K D++S ++L +L G
Sbjct: 231 KPCDAKVDIWSSCCMMLHMLNG 252
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 78/177 (44%), Gaps = 29/177 (16%)
Query: 192 SLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEG 251
++P KIA+ K L LH + VI+RD K SN+L+++ K DFG++ +
Sbjct: 132 TIPEDILGKIAVSIVKALEHLHSKLS-VIHRDVKPSNVLINALGQVKXCDFGISGYLVDD 190
Query: 252 SNTHVTTRVMGTYGYAAPEYI----STGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKS 307
+ G Y APE I + + KSD++S G+ +EL R D
Sbjct: 191 VAKDIDA---GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDS----- 242
Query: 308 EQNLVDWAKPYLRSSRRLRYIVD---PRLAGQYSVKGAKEMAVLALQCISVNPKDRP 361
W P+ ++L+ +V+ P+L K + E QC+ N K+RP
Sbjct: 243 ------WGTPF----QQLKQVVEEPSPQLPAD---KFSAEFVDFTSQCLKKNSKERP 286
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 97/216 (44%), Gaps = 26/216 (12%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+++ ++G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDS------GELVAIK----KVLQDKRFKNRELQIMRKL 70
Query: 152 RHPHLVRLIGYCCEDEERL------LVYEFMPRG--SLENHLFKRISVSLPWGTRLKIAI 203
H ++VRL + E+ LV +++P + H + R +LP
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 129
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTA-KLSDFGLAKMGPEGSNTHVTTRVMG 262
+ LA++H + +RD K N+LLD D KL DFG AK G + +
Sbjct: 130 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICS 185
Query: 263 TYGYAAPEYI-STGHLTTKSDVYSFGVVLLELLTGR 297
Y Y APE I T+ DV+S G VL ELL G+
Sbjct: 186 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+++ ++G G FG V++ + D + VA+K + LQ R E+ + +L
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDS------GELVAIK----KVLQDKRFKNRELQIMRKL 74
Query: 152 RHPHLVRLIGYCC-----EDEERL-LVYEFMPRG--SLENHLFKRISVSLPWGTRLKIAI 203
H ++VRL + +DE L LV +++P + H + R +LP
Sbjct: 75 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 133
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTA-KLSDFGLAKMGPEGSNTHVTTRVMG 262
+ LA++H + +RD K N+LLD D KL DFG AK G + +
Sbjct: 134 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICS 189
Query: 263 TYGYAAPEYI-STGHLTTKSDVYSFGVVLLELLTGR 297
Y Y APE I T+ DV+S G VL ELL G+
Sbjct: 190 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 13/120 (10%)
Query: 196 GTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNT 254
G L I I A+ + FLH +++RD K SNI D K+ DFGL M +
Sbjct: 164 GVCLHIFIQIAEAVEFLHS--KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 221
Query: 255 HVTTRV---------MGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELL-TGRRSMDKLR 304
V T + +GT Y +PE I + + K D++S G++L ELL + M+++R
Sbjct: 222 TVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR 281
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 104/227 (45%), Gaps = 39/227 (17%)
Query: 85 ELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL------DIEGLQGH 138
E+RA+ ++ +G G +G V D R G K VA+K L ++ + +
Sbjct: 22 EVRAVYRDLQP---VGSGAYGAVCSAV---DGRTGAK---VAIKKLYRPFQSELFAKRAY 72
Query: 139 REWLAEVIFLGQLRHPHLVRLIGYCCEDE------ERLLVYEFMPRGSLENHLFKRISVS 192
RE + L +RH +++ L+ DE + LV FM G+ L K +
Sbjct: 73 RE----LRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLG 126
Query: 193 LPWGTRLKIAI-GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEG 251
R++ + KGL ++H A +I+RD K N+ ++ D K+ DFGLA+
Sbjct: 127 ---EDRIQFLVYQMLKGLRYIHAA--GIIHRDLKPGNLAVNEDCELKILDFGLARQADSE 181
Query: 252 SNTHVTTRVMGTYGYAAPEYISTGHLTTKS-DVYSFGVVLLELLTGR 297
V TR Y APE I T++ D++S G ++ E++TG+
Sbjct: 182 MXGXVVTR-----WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 91/202 (45%), Gaps = 19/202 (9%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG VH+ +D + G + AVK + +E + E++ L P +V
Sbjct: 101 LGRGSFGEVHR---MEDKQTGFQC---AVKKVRLEVFRAE-----ELMACAGLTSPRIVP 149
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L G E + E + GSL L K LP L A +GL +LH
Sbjct: 150 LYGAVREGPWVNIFMELLEGGSL-GQLVKEQGC-LPEDRALYYLGQALEGLEYLHSRR-- 205
Query: 219 VIYRDFKTSNILLDSDFT-AKLSDFGLAK-MGPEGSNTHVTT--RVMGTYGYAAPEYIST 274
+++ D K N+LL SD + A L DFG A + P+G + T + GT + APE +
Sbjct: 206 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLG 265
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
K DV+S ++L +L G
Sbjct: 266 RSCDAKVDVWSSCCMMLHMLNG 287
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 91/202 (45%), Gaps = 19/202 (9%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG VH+ +D + G + AVK + +E + E++ L P +V
Sbjct: 82 LGRGSFGEVHR---MEDKQTGFQC---AVKKVRLEVFRAE-----ELMACAGLTSPRIVP 130
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L G E + E + GSL L K LP L A +GL +LH
Sbjct: 131 LYGAVREGPWVNIFMELLEGGSL-GQLVKEQGC-LPEDRALYYLGQALEGLEYLHSRR-- 186
Query: 219 VIYRDFKTSNILLDSDFT-AKLSDFGLAK-MGPEGSNTHVTT--RVMGTYGYAAPEYIST 274
+++ D K N+LL SD + A L DFG A + P+G + T + GT + APE +
Sbjct: 187 ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLG 246
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
K DV+S ++L +L G
Sbjct: 247 RSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 150/360 (41%), Gaps = 71/360 (19%)
Query: 75 GPDLYDF-----QLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKL 129
G D DF +L ELR +L EGGF V++ D+ G + A+K
Sbjct: 12 GRDQSDFVGQTVELGELR-----LRVRRVLAEGGFAFVYEA---QDVGSG---REYALKR 60
Query: 130 LDIEGLQGHREWLAEVIFLGQLR-HPHLVRL-----IGYCCED--EERLLVYEFMPRGSL 181
L + +R + EV F+ +L HP++V+ IG D + L+ + +G L
Sbjct: 61 LLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQL 120
Query: 182 ENHLFKRISVS-LPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLS 240
L K S L T LKI + + +H + P+I+RD K N+LL + T KL
Sbjct: 121 VEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLC 180
Query: 241 DFGLA---------------KMGPEGSNTHVTTRVMGTYGYAAPEYI---STGHLTTKSD 282
DFG A + E T TT + Y PE I S + K D
Sbjct: 181 DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPM-----YRTPEIIDLYSNFPIGEKQD 235
Query: 283 VYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAGQYSVKGA 342
+++ G +L LL R + D AK + + +Y + P QY+V +
Sbjct: 236 IWALGCILY-LLCFR----------QHPFEDGAKLRIVNG---KYSIPPH-DTQYTVFHS 280
Query: 343 KEMAVLALQCISVNPKDRPKMAAVVATLESLLNLKDMAVSCGQWPATQKSTRNGVSPKAT 402
A+L VNP++R +A VV L+ + +++ + P T+ +NG AT
Sbjct: 281 LIRAML-----QVNPEERLSIAEVVHQLQEIAAARNVN---PKSPITELLEQNGGYGSAT 332
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 207 KGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGY 266
+GL ++H A+ +I+RD K SN+ ++ D K+ DF LA+ + +V TR Y
Sbjct: 136 RGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR-----WY 188
Query: 267 AAPE-YISTGHLTTKSDVYSFGVVLLELLTGR 297
APE ++ H D++S G ++ ELLTGR
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ G++ +T V+ Y Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRY-YR 192
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
APE I D++S GV++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 30/218 (13%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+++ ++G G FG V++ + D + VA+K + LQG E+ + +L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDS------GELVAIK----KVLQGKAFKNRELQIMRKL 70
Query: 152 RHPHLVRLIGYCC-----EDEERL-LVYEFMPRG--SLENHLFKRISVSLPWGTRLKIAI 203
H ++VRL + +DE L LV +++P + H + R +LP
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 129
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTA-KLSDFGLAK--MGPEGSNTHVTTRV 260
+ LA++H + +RD K N+LLD D KL DFG AK + E + +++ +R
Sbjct: 130 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 261 MGTYGYAAPEYI-STGHLTTKSDVYSFGVVLLELLTGR 297
Y APE I T+ DV+S G VL ELL G+
Sbjct: 188 -----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 30/218 (13%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+++ ++G G FG V++ + D + VA+K + LQG E+ + +L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDS------GELVAIK----KVLQGKAFKNRELQIMRKL 70
Query: 152 RHPHLVRLIGYCC-----EDEERL-LVYEFMPRG--SLENHLFKRISVSLPWGTRLKIAI 203
H ++VRL + +DE L LV +++P + H + R +LP
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH-YSRAKQTLPVIYVKLYMY 129
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTA-KLSDFGLAK--MGPEGSNTHVTTRV 260
+ LA++H + +RD K N+LLD D KL DFG AK + E + +++ +R
Sbjct: 130 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 261 MGTYGYAAPEYI-STGHLTTKSDVYSFGVVLLELLTGR 297
Y APE I T+ DV+S G VL ELL G+
Sbjct: 188 -----YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 17/213 (7%)
Query: 89 ITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQG--HREWLAEVI 146
T+ + LG+G F V + + L Q A +++ + L H++ E
Sbjct: 9 FTEEYQLFEELGKGAFSVVRRCV------KVLAGQEYAAMIINTKKLSARDHQKLEREAR 62
Query: 147 FLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAA 206
L+HP++VRL E+ L+++ + G L + R S + I A
Sbjct: 63 ICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEA 122
Query: 207 KGLAFLHGAENPVIYRDFKTSNILLDSDF---TAKLSDFGLAKMGPEGSNTHVTTRVMGT 263
LH + V++R+ K N+LL S KL+DFGLA + EG GT
Sbjct: 123 ----VLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQ-QAWFGFAGT 176
Query: 264 YGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
GY +PE + D+++ GV+L LL G
Sbjct: 177 PGYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+G G FG VH+ D + G + AVK + +E + + E++ L P +V
Sbjct: 82 VGRGSFGEVHR---MKDKQTGFQC---AVKKVRLEVFR-----VEELVACAGLSSPRIVP 130
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENP 218
L G E + E + GSL L K++ LP L A +GL +LH
Sbjct: 131 LYGAVREGPWVNIFMELLEGGSL-GQLIKQMGC-LPEDRALYYLGQALEGLEYLH--TRR 186
Query: 219 VIYRDFKTSNILLDSDFT-AKLSDFGLA-KMGPEGSNTHVTT--RVMGTYGYAAPEYIST 274
+++ D K N+LL SD + A L DFG A + P+G + T + GT + APE +
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMG 246
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
K D++S ++L +L G
Sbjct: 247 KPCDAKVDIWSSCCMMLHMLNG 268
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ G++ +T V+ Y Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRY-YR 192
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
APE I D++S GV++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 18/201 (8%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD---IEGLQGHREWLAEVIFLGQLRHPH 155
+G G FG V ++ A+K+LD + L+ L E L + P
Sbjct: 49 IGTGSFGRVML------VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
LV+L ++ +V E++P G + +HL + S P I +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHSL 160
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTG 275
+ +IYRD K N+L+D K++DFG AK +G T + GT Y APE I +
Sbjct: 161 D--LIYRDLKPENLLIDQQGYIKVADFGFAKR-VKGR----TWXLCGTPEYLAPEIILSK 213
Query: 276 HLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V H + + L Q V VKL +IE + L V F P
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKV-VKLKEIEHTLNEKRILQAVNF------P 101
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
LV+L ++ +V E+ P G + +HL + S P I +LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHS 159
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K N+++D +++DFGLAK +G T + GT Y APE I +
Sbjct: 160 LD--LIYRDLKPENLMIDQQGYIQVTDFGLAKR-VKGR----TWXLCGTPEYLAPEIILS 212
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAG 234
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 96/236 (40%), Gaps = 50/236 (21%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE-----WLAEVI 146
+F +LG+G FG V K R L ++ A+K + H E L+EV
Sbjct: 7 DFEEIAVLGQGAFGQVVKA------RNALDSRYYAIKKI------RHTEEKLSTILSEVX 54
Query: 147 FLGQLRHPHLVRLIGYCCEDEERLLVYE----------FMPRGSLENH----LFKRISVS 192
L L H ++VR Y E R V F+ EN L +++
Sbjct: 55 LLASLNHQYVVRY--YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLN 112
Query: 193 LPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK------ 246
++ + L+++H +I+R+ K NI +D K+ DFGLAK
Sbjct: 113 QQRDEYWRLFRQILEALSYIHS--QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSL 170
Query: 247 -------MGPEGSNTHVTTRVMGTYGYAAPEYIS-TGHLTTKSDVYSFGVVLLELL 294
GS+ ++T+ +GT Y A E + TGH K D YS G++ E +
Sbjct: 171 DILKLDSQNLPGSSDNLTS-AIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 87/202 (43%), Gaps = 20/202 (9%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V HK + + L Q V VKL IE + V F P
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKV-VKLKQIEHTLNEKRIQQAVNF------P 102
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
LV+L ++ +V E+ P G + +HL + S P I +LH
Sbjct: 103 FLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHS 160
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K N+L+D K++DFG AK +G T + GT Y APE I +
Sbjct: 161 LD--LIYRDLKPENLLIDQQGYIKVADFGFAKR-VKGR----TWXLCGTPEYLAPEIILS 213
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 18/201 (8%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD---IEGLQGHREWLAEVIFLGQLRHPH 155
LG G FG V ++ A+K+LD + L+ L E L + P
Sbjct: 49 LGTGSFGRVML------VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
LV+L ++ +V E++P G + +HL +RI R A +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFXEPHARF-YAAQIVLTFEYLHSL 160
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTG 275
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 161 D--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILSK 213
Query: 276 HLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 18/201 (8%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD---IEGLQGHREWLAEVIFLGQLRHPH 155
LG G FG V ++ A+K+LD + L+ L E L + P
Sbjct: 49 LGTGSFGRVML------VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
LV+L ++ +V E++P G + +HL +RI R A +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFXEPHARF-YAAQIVLTFEYLHSL 160
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTG 275
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 161 D--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILSK 213
Query: 276 HLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 92 NFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQL 151
+++ ++G G FG V++ + D + VA+K + LQG E+ + +L
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDS------GELVAIK----KVLQGKAFKNRELQIMRKL 70
Query: 152 RHPHLVRLIGYCC-----EDEERL-LVYEFMPRG--SLENHLFKRISVSLPWGTRLKIAI 203
H ++VRL + +DE L LV +++P + H + R +LP
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARH-YSRAKQTLPVIYVKLYMY 129
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTA-KLSDFGLAKMGPEGSNTHVTTRVMG 262
+ LA++H + +RD K N+LLD D KL DFG AK G + +
Sbjct: 130 QLFRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSXICS 185
Query: 263 TYGYAAPEYI-STGHLTTKSDVYSFGVVLLELLTGR 297
Y Y APE I T+ DV+S G VL ELL G+
Sbjct: 186 RY-YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 89/201 (44%), Gaps = 18/201 (8%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD---IEGLQGHREWLAEVIFLGQLRHPH 155
LG G FG V ++ A+K+LD + L+ L E L + P
Sbjct: 50 LGTGSFGRVML------VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
LV+L ++ +V E++P G + +HL +RI R A +LH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-RRIGRFXEPHARF-YAAQIVLTFEYLHSL 161
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTG 275
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 162 D--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILSK 214
Query: 276 HLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 88/201 (43%), Gaps = 18/201 (8%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD---IEGLQGHREWLAEVIFLGQLRHPH 155
LG G FG V ++ A+K+LD + L+ L E L + P
Sbjct: 49 LGTGSFGRVML------VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
LV+L ++ +V E+ P G + +HL +RI R A +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFXEPHARF-YAAQIVLTFEYLHSL 160
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTG 275
+ +IYRD K N+++D K++DFG AK +G T + GT Y APE I +
Sbjct: 161 D--LIYRDLKPENLMIDQQGYIKVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILSK 213
Query: 276 HLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 144 EVIFLGQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGT 197
E++ + + H +++ L+ E ++ LV E M + +L + I + L
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQMELDHER 127
Query: 198 RLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVT 257
+ G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ G++ +T
Sbjct: 128 MSYLLYQMLXGIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMT 183
Query: 258 TRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLE------LLTGRRSMDKLRPKSEQ 309
V+ Y Y APE I D++S G ++ E L GR +D+ EQ
Sbjct: 184 PYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 18/201 (8%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD---IEGLQGHREWLAEVIFLGQLRHPH 155
LG G FG V ++ A+K+LD + L+ L E L + P
Sbjct: 50 LGTGSFGRVML------VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
LV+L ++ +V E++P G + +HL + S P I +LH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHSL 161
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTG 275
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 162 D--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILSK 214
Query: 276 HLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 69/148 (46%), Gaps = 5/148 (3%)
Query: 149 GQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKG 208
G+L+ PH+V + + D + + + L L ++ ++ P + IG+A
Sbjct: 89 GRLQEPHVVPIHDFGEIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALD 148
Query: 209 LAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
A +RD K NIL+ +D A L DFG+A + T + V GT Y A
Sbjct: 149 AA----HAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXA 203
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLTG 296
PE S H T ++D+Y+ VL E LTG
Sbjct: 204 PERFSESHATYRADIYALTCVLYECLTG 231
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 18/201 (8%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD---IEGLQGHREWLAEVIFLGQLRHPH 155
LG G FG V ++ A+K+LD + L+ L E L + P
Sbjct: 50 LGTGSFGRVML------VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
LV+L ++ +V E++P G + +HL + S P I +LH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHSL 161
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTG 275
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 162 D--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWTLCGTPEYLAPEIILSK 214
Query: 276 HLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 18/201 (8%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD---IEGLQGHREWLAEVIFLGQLRHPH 155
LG G FG V ++ A+K+LD + L+ L E L + P
Sbjct: 49 LGTGSFGRVML------VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
LV+L ++ +V E++P G + +HL + S P I +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHSL 160
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTG 275
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 161 D--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILSK 213
Query: 276 HLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 18/201 (8%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD---IEGLQGHREWLAEVIFLGQLRHPH 155
LG G FG V ++ A+K+LD + L+ L E L + P
Sbjct: 49 LGTGSFGRVML------VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
LV+L ++ +V E++P G + +HL + S P I +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHSL 160
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTG 275
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 161 D--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILSK 213
Query: 276 HLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 18/201 (8%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD---IEGLQGHREWLAEVIFLGQLRHPH 155
LG G FG V ++ A+K+LD + L+ L E L + P
Sbjct: 49 LGTGSFGRVML------VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
LV+L ++ +V E++P G + +HL + S P I +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHSL 160
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTG 275
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 161 D--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILSK 213
Query: 276 HLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ G++ +T V+ Y Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPEVVTRY-YR 192
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
APE I D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 23/208 (11%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLA------EVIFLGQLR 152
LG G F V K RQ + A K + L R ++ EV L ++R
Sbjct: 13 LGSGQFAIVRK------CRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 153 HPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFL 212
HP+++ L + +L+ E + G L + L ++ S++ T+ I G+ +L
Sbjct: 67 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI--LDGVHYL 124
Query: 213 HGAENPVIYRDFKTSNI-LLDSDF---TAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
H + + D K NI LLD + KL DFG+A G+ + GT + A
Sbjct: 125 HSKR--IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVA 179
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLTG 296
PE ++ L ++D++S GV+ LL+G
Sbjct: 180 PEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 87/201 (43%), Gaps = 18/201 (8%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD---IEGLQGHREWLAEVIFLGQLRHPH 155
LG G FG V ++ A+K+LD + L+ L E L + P
Sbjct: 49 LGTGSFGRVML------VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
LV+L ++ +V E+ P G + +HL + S P I +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHSL 160
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTG 275
+ +IYRD K N+++D K++DFG AK +G T + GT Y APE I +
Sbjct: 161 D--LIYRDLKPENLMIDQQGYIKVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILSK 213
Query: 276 HLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 18/201 (8%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD---IEGLQGHREWLAEVIFLGQLRHPH 155
LG G FG V ++ A+K+LD + L+ L E L + P
Sbjct: 35 LGTGSFGRVML------VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 88
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
LV+L ++ +V E++P G + +HL + S P I +LH
Sbjct: 89 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHSL 146
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTG 275
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 147 D--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWTLCGTPEYLAPEIILSK 199
Query: 276 HLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 200 GYNKAVDWWALGVLIYEMAAG 220
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 87/202 (43%), Gaps = 20/202 (9%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V HK + + L Q V VKL IE + L V F P
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------P 122
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
LV+L ++ +V E++ G + +HL + S P I +LH
Sbjct: 123 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHS 180
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K N+L+D +++DFG AK + T + GT Y APE I +
Sbjct: 181 LD--LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWT-----LCGTPEYLAPEIILS 233
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 234 KGYNKAVDWWALGVLIYEMAAG 255
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 23/208 (11%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLA------EVIFLGQLR 152
LG G F V K RQ + A K + L R ++ EV L ++R
Sbjct: 20 LGSGQFAIVRK------CRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 73
Query: 153 HPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFL 212
HP+++ L + +L+ E + G L + L ++ S++ T+ I G+ +L
Sbjct: 74 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI--LDGVHYL 131
Query: 213 HGAENPVIYRDFKTSNI-LLDSDF---TAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
H + + D K NI LLD + KL DFG+A G+ + GT + A
Sbjct: 132 HSKR--IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVA 186
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLTG 296
PE ++ L ++D++S GV+ LL+G
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ +N +T V+ Y Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--CTNFMMTPYVVTRY-YR 192
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
APE I D++S G ++ EL+ G
Sbjct: 193 APEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 96/225 (42%), Gaps = 17/225 (7%)
Query: 77 DLYDFQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQ 136
+LY ++ T ++ LG+G F V + + Q A K+++ + L
Sbjct: 17 NLYFQXMATCTRFTDDYQLFEELGKGAFSVVRRCV------KKTPTQEYAAKIINTKKLS 70
Query: 137 G--HREWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLP 194
H++ E L+HP++VRL E+ LV++ + G L + R S
Sbjct: 71 ARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA 130
Query: 195 WGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDF---TAKLSDFGLAKMGPEG 251
+ I + H ++ +++RD K N+LL S KL+DFGLA + +G
Sbjct: 131 DASHCIHQILESVN----HIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQG 185
Query: 252 SNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
GT GY +PE + D+++ GV+L LL G
Sbjct: 186 EQ-QAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 23/206 (11%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLK---AQAVAVKLLDIEGLQG--HREWLAEVIFLGQLRH 153
LG+G F V R+ +K Q A K+++ + L H++ E L+H
Sbjct: 12 LGKGAFSVV---------RRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 154 PHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLH 213
P++VRL E+ LV++ + G L + R S + I + L+
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 214 GAENPVIYRDFKTSNILLDSD---FTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE 270
G +++RD K N+LL S KL+DFGLA + +G + GT GY +PE
Sbjct: 123 G----IVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQG-DQQAWFGFAGTPGYLSPE 176
Query: 271 YISTGHLTTKSDVYSFGVVLLELLTG 296
+ D+++ GV+L LL G
Sbjct: 177 VLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ G++ +T V+ Y Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 192
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
APE I D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 24/164 (14%)
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSL-----ENHLFKRISVSLPWGTR 198
E+ L +L HP ++++ + + E+ +V E M G L N K + L + +
Sbjct: 65 EIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQ 122
Query: 199 LKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNTH 255
+ +A+ +LH EN +I+RD K N+LL S D K++DFG +K+ E T
Sbjct: 123 MLLAV------QYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TS 171
Query: 256 VTTRVMGTYGYAAPEY---ISTGHLTTKSDVYSFGVVLLELLTG 296
+ + GT Y APE + T D +S GV+L L+G
Sbjct: 172 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ G++ +T V+ Y Y
Sbjct: 139 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 193
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
APE I D++S G ++ E++ G
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 144 EVIFLGQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGT 197
E++ + + H +++ L+ E ++ LV E M + +L + I + L
Sbjct: 73 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQMELDHER 127
Query: 198 RLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVT 257
+ G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ G++ +T
Sbjct: 128 MSYLLYQMLXGIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMT 183
Query: 258 TRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLE------LLTGRRSMDKLRPKSEQ 309
V+ Y Y APE I D++S G ++ E L GR +D+ EQ
Sbjct: 184 PYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 24/164 (14%)
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSL-----ENHLFKRISVSLPWGTR 198
E+ L +L HP ++++ + + E+ +V E M G L N K + L +
Sbjct: 65 EIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 199 LKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNTH 255
L + +LH EN +I+RD K N+LL S D K++DFG +K+ E T
Sbjct: 124 LL-------AVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TS 171
Query: 256 VTTRVMGTYGYAAPEY---ISTGHLTTKSDVYSFGVVLLELLTG 296
+ + GT Y APE + T D +S GV+L L+G
Sbjct: 172 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 23/208 (11%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLA------EVIFLGQLR 152
LG G F V K RQ + A K + L R ++ EV L ++R
Sbjct: 34 LGSGQFAIVRK------CRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR 87
Query: 153 HPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFL 212
HP+++ L + +L+ E + G L + L ++ S++ T+ I G+ +L
Sbjct: 88 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI--LDGVHYL 145
Query: 213 HGAENPVIYRDFKTSNI-LLDSDF---TAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAA 268
H + + D K NI LLD + KL DFG+A G+ + GT + A
Sbjct: 146 HSKR--IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVA 200
Query: 269 PEYISTGHLTTKSDVYSFGVVLLELLTG 296
PE ++ L ++D++S GV+ LL+G
Sbjct: 201 PEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 24/164 (14%)
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSL-----ENHLFKRISVSLPWGTR 198
E+ L +L HP ++++ + + E+ +V E M G L N K + L + +
Sbjct: 71 EIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQ 128
Query: 199 LKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNTH 255
+ +A+ +LH EN +I+RD K N+LL S D K++DFG +K+ E T
Sbjct: 129 MLLAV------QYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TS 177
Query: 256 VTTRVMGTYGYAAPEY---ISTGHLTTKSDVYSFGVVLLELLTG 296
+ + GT Y APE + T D +S GV+L L+G
Sbjct: 178 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 207 KGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK--MGPEGSNTHVTTRVMGTY 264
+GL ++H A+ VI+RD K SN+L++ + K+ DFG+A+ + + T + T
Sbjct: 170 RGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 227
Query: 265 GYAAPEYISTGHLTTKS-DVYSFGVVLLELLTGRR 298
Y APE + + H T++ D++S G + E+L R+
Sbjct: 228 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 24/164 (14%)
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSL-----ENHLFKRISVSLPWGTR 198
E+ L +L HP ++++ + + E+ +V E M G L N K + L + +
Sbjct: 64 EIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL-YFYQ 121
Query: 199 LKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNTH 255
+ +A+ +LH EN +I+RD K N+LL S D K++DFG +K+ E T
Sbjct: 122 MLLAV------QYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TS 170
Query: 256 VTTRVMGTYGYAAPEY---ISTGHLTTKSDVYSFGVVLLELLTG 296
+ + GT Y APE + T D +S GV+L L+G
Sbjct: 171 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V HK + + L Q V VKL IE + L V F P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------P 101
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
LV+L ++ +V E++ G + +HL +RI R A +LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARF-YAAQIVLTFEYLHS 159
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 160 LD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILS 212
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ G++ +T V+ Y Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 192
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
APE I D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 24/164 (14%)
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSL-----ENHLFKRISVSLPWGTR 198
E+ L +L HP ++++ + + E+ +V E M G L N K + L +
Sbjct: 65 EIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 199 LKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNTH 255
L + +LH EN +I+RD K N+LL S D K++DFG +K+ E T
Sbjct: 124 LL-------AVQYLH--ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---TS 171
Query: 256 VTTRVMGTYGYAAPEY---ISTGHLTTKSDVYSFGVVLLELLTG 296
+ + GT Y APE + T D +S GV+L L+G
Sbjct: 172 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V HK + + L Q V VKL IE + L V F P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------P 101
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
LV+L ++ +V E++ G + +HL +RI R A +LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARF-YAAQIVLTFEYLHS 159
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 160 LD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILS 212
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V HK + + L Q V VKL IE + L V F P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------P 101
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
LV+L ++ +V E++ G + +HL + S P I +LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHS 159
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 160 LD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILS 212
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAG 234
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 144 EVIFLGQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGT 197
E++ + + H +++ L+ E ++ LV E M + +L + I + L
Sbjct: 66 ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQMELDHER 120
Query: 198 RLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVT 257
+ G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ G++ +T
Sbjct: 121 MSYLLYQMLXGIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMT 176
Query: 258 TRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLE------LLTGRRSMDKLRPKSEQ 309
V+ Y Y APE I D++S G ++ E L GR +D+ EQ
Sbjct: 177 PYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 233
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 144 EVIFLGQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGT 197
E++ + + H +++ L+ E ++ LV E M + +L + I + L
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLXQVIQMELDHER 127
Query: 198 RLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVT 257
+ G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ G++ +T
Sbjct: 128 MSYLLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMT 183
Query: 258 TRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLE------LLTGRRSMDKLRPKSEQ 309
V+ Y Y APE I D++S G ++ E L GR +D+ EQ
Sbjct: 184 PYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 24/213 (11%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLR-HPHL 156
LLGEG + V L+ G + AVK+++ + EV L Q + + ++
Sbjct: 20 LLGEGAYAKVQGAV---SLQNG---KEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNI 73
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
+ LI + +D LV+E + GS+ H+ K+ + +R+ + AA L FLH
Sbjct: 74 LELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAA--LDFLH--T 129
Query: 217 NPVIYRDFKTSNILLDSDFT---AKLSDFGLAK-MGPEGSNTHVTTRVM----GTYGYAA 268
+ +RD K NIL +S K+ DF L M S T +TT + G+ Y A
Sbjct: 130 KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMA 189
Query: 269 PEYIS--TGHLT---TKSDVYSFGVVLLELLTG 296
PE + T T + D++S GVVL +L+G
Sbjct: 190 PEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 102/225 (45%), Gaps = 39/225 (17%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHRE---WLAEVIFLGQLR-HP 154
LG+G +G V K D R G + VAVK + + Q + E++ L +L H
Sbjct: 17 LGKGAYGIVWKSI---DRRTG---EVVAVKKI-FDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 155 HLVRLIGYCCEDEER--LLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFL 212
++V L+ D +R LV+++M + H R ++ P + + K + +L
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYM---ETDLHAVIRANILEPVHKQY-VVYQLIKVIKYL 125
Query: 213 HGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPE------------GSNTH----- 255
H +++RD K SNILL+++ K++DFGL++ NT
Sbjct: 126 HSG--GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDD 183
Query: 256 --VTTRVMGTYGYAAPEYISTGHLTTKS-DVYSFGVVLLELLTGR 297
+ T + T Y APE + TK D++S G +L E+L G+
Sbjct: 184 QPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V HK + + L Q V VKL IE + L V F P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------P 101
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
LV+L ++ +V E++ G + +HL + S P I +LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHS 159
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 160 LD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLXGTPEYLAPEIILS 212
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ G++ +T V+ Y Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 192
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
APE I D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V HK + + L Q V VKL IE + L V F P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------P 101
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
LV+L ++ +V E++ G + +HL + S P I +LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHS 159
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 160 LD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLAGTPEYLAPEIILS 212
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V HK + + L Q V VKL IE + L V F P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------P 101
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
LV+L ++ +V E++ G + +HL +RI R A +LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARF-YAAQIVLTFEYLHS 159
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 160 LD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILS 212
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAG 234
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ +N +T V+ Y Y
Sbjct: 136 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--STNFMMTPYVVTRY-YR 190
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
APE I D++S G ++ EL+ G
Sbjct: 191 APEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V HK + + L Q V VKL IE + L V F P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------P 101
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
LV+L ++ +V E++ G + +HL + S P I +LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHS 159
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 160 LD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILS 212
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V HK + + L Q V VKL IE + L V F P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------P 101
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
LV+L ++ +V E++ G + +HL +RI R A +LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFAEPHARF-YAAQIVLTFEYLHS 159
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 160 LD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILS 212
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V HK + + L Q V VKL IE + L V F P
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------P 96
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
LV+L ++ +V E++ G + +HL +RI R A +LH
Sbjct: 97 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARF-YAAQIVLTFEYLHS 154
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 155 LD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILS 207
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 208 KGYNKAVDWWALGVLIYEMAAG 229
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V HK + + L Q V VKL IE + L V F P
Sbjct: 70 LGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------P 122
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
LV+L ++ +V E++ G + +HL +RI R A +LH
Sbjct: 123 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-RRIGRFXEPHARF-YAAQIVLTFEYLHS 180
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 181 LD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILS 233
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 234 KGYNKAVDWWALGVLIYEMAAG 255
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V HK + + L Q V VKL IE + L V F P
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------P 102
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
LV+L ++ +V E++ G + +HL + S P I +LH
Sbjct: 103 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHS 160
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 161 LD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILS 213
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAG 235
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ G++ +T V+ Y Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRY-YR 192
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
APE I D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V HK + + L Q V VKL IE + L V F P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------P 101
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
LV+L ++ +V E++ G + +HL + S P I +LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHS 159
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 160 LD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILS 212
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V HK + + L Q V VKL IE + L V F P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------P 101
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
LV+L ++ +V E++ G + +HL + S P I +LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHS 159
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 160 LD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILS 212
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V HK + + L Q V VKL IE + L V F P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------P 101
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
LV+L ++ +V E++ G + +HL + S P I +LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHS 159
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 160 LD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILS 212
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ G++ +T V+ Y Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRY-YR 192
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
APE I D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ G++ +T V+ Y Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRY-YR 192
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
APE I D++S G ++ E++ G
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 97/225 (43%), Gaps = 30/225 (13%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFLGQLRHPHL 156
+G G G V Y + + VA+K L + + E++ + + H ++
Sbjct: 70 IGSGAQGIVCAAY------DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 157 VRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLA 210
+ L+ E ++ LV E M + +L + I + L + G+
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYLLYQMLCGIK 178
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE 270
LH A +I+RD K SNI++ SD T K+ DFGLA+ G++ +T V+ Y Y APE
Sbjct: 179 HLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPE 233
Query: 271 YISTGHLTTKSDVYSFGVVLLE------LLTGRRSMDKLRPKSEQ 309
I D++S G ++ E L GR +D+ EQ
Sbjct: 234 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 278
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 24/165 (14%)
Query: 143 AEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSL-----ENHLFKRISVSLPWGT 197
E+ L +L HP ++++ + + E+ +V E M G L N K + L +
Sbjct: 203 TEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 261
Query: 198 RLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNT 254
L LA + EN +I+RD K N+LL S D K++DFG +K+ E T
Sbjct: 262 ML---------LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---T 309
Query: 255 HVTTRVMGTYGYAAPEY---ISTGHLTTKSDVYSFGVVLLELLTG 296
+ + GT Y APE + T D +S GV+L L+G
Sbjct: 310 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 77/160 (48%), Gaps = 18/160 (11%)
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAI 203
E+ L +L HP++++L E LV E + G LF RI + R A
Sbjct: 98 EIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGG----ELFDRIVEKGYYSER--DAA 151
Query: 204 GAAK----GLAFLHGAENPVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNTHV 256
A K +A+LH EN +++RD K N+L + D K++DFGL+K+ + +
Sbjct: 152 DAVKQILEAVAYLH--ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVL 206
Query: 257 TTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
V GT GY APE + + D++S G++ LL G
Sbjct: 207 MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 137/324 (42%), Gaps = 48/324 (14%)
Query: 87 RAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLL-DIEGLQGHREWLAEV 145
R I + +G+G +G V G + + VAVK+ E RE E+
Sbjct: 33 RTIAKQIQMVKQIGKGRYGEVWMG--------KWRGEKVAVKVFFTTEEASWFRE--TEI 82
Query: 146 IFLGQLRHPHLVRLIGYCCED-------EERLLVYEFMPRGSLENHLFKRISVSLPWGTR 198
+RH ++ +G+ D + L+ ++ GSL ++L S +L +
Sbjct: 83 YQTVLMRHENI---LGFIAADIKGTGSWTQLYLITDYHENGSLYDYL---KSTTLDAKSM 136
Query: 199 LKIAIGAAKGLAFLHG------AENPVIYRDFKTSNILLDSDFTAKLSDFGLA-KMGPEG 251
LK+A + GL LH + + +RD K+ NIL+ + T ++D GLA K +
Sbjct: 137 LKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDT 196
Query: 252 SNTHV--TTRVMGTYGYAAPEY----ISTGHLTT--KSDVYSFGVVLLELLTGRRSMDKL 303
+ + TRV GT Y PE ++ H + +D+YSFG++L E+ RR +
Sbjct: 197 NEVDIPPNTRV-GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCVSGG 253
Query: 304 RPKSEQNLVDWAKPYLRSSRRLRYIV-----DPRLAGQYSV-KGAKEMAVLALQCISVNP 357
+ Q P S +R IV P ++S + ++M L +C + NP
Sbjct: 254 IVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNP 313
Query: 358 KDRPKMAAVVATLESLLNLKDMAV 381
R V TL + +D+ +
Sbjct: 314 ASRLTALRVKKTLAKMSESQDIKL 337
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 207 KGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK--MGPEGSNTHVTTRVMGTY 264
+GL ++H A+ VI+RD K SN+L++ + K+ DFG+A+ + + T + T
Sbjct: 169 RGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 226
Query: 265 GYAAPEYISTGHLTTKS-DVYSFGVVLLELLTGRR 298
Y APE + + H T++ D++S G + E+L R+
Sbjct: 227 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 24/165 (14%)
Query: 143 AEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSL-----ENHLFKRISVSLPWGT 197
E+ L +L HP ++++ + + E+ +V E M G L N K + L +
Sbjct: 189 TEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 247
Query: 198 RLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNT 254
L LA + EN +I+RD K N+LL S D K++DFG +K+ E T
Sbjct: 248 ML---------LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---T 295
Query: 255 HVTTRVMGTYGYAAPEY---ISTGHLTTKSDVYSFGVVLLELLTG 296
+ + GT Y APE + T D +S GV+L L+G
Sbjct: 296 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 95/217 (43%), Gaps = 23/217 (10%)
Query: 88 AITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLK---AQAVAVKLLDIEGLQG--HREWL 142
++T + LG+G F V R+ +K Q A K+++ + L H++
Sbjct: 1 SMTDEYQLFEELGKGAFSVV---------RRCMKIPTGQEYAAKIINTKKLSARDHQKLE 51
Query: 143 AEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIA 202
E L+HP++VRL E+ LV++ + G L + R S +
Sbjct: 52 REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQ 111
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSD---FTAKLSDFGLAKMGPEGSNTHVTTR 259
I + L+G +++RD K N+LL S KL+DFGLA + +G +
Sbjct: 112 ILESVNHCHLNG----IVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQG-DQQAWFG 165
Query: 260 VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
GT GY +PE + D+++ GV+L LL G
Sbjct: 166 FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 87/201 (43%), Gaps = 18/201 (8%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD---IEGLQGHREWLAEVIFLGQLRHPH 155
LG G FG V ++ A+K+LD + L+ L E L + P
Sbjct: 49 LGTGSFGRVML------VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
LV+L ++ +V E+ P G + +HL + S P I +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHSL 160
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTG 275
+ +IYRD K N+++D +++DFG AK +G T + GT Y APE I +
Sbjct: 161 D--LIYRDLKPENLMIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILSK 213
Query: 276 HLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIE----GLQGHREWLAEVIFLGQLRHP 154
+GEG +G V+K Q + A+K + +E G+ + E+ L +L+H
Sbjct: 10 IGEGTYGVVYKA-------QNNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHS 60
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISV---SLPWGTRLKIAIGAAKGLAF 211
++V+L + +LV+E L+ L K + V L T + G+A+
Sbjct: 61 NIVKLYDVIHTKKRLVLVFE-----HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 212 LHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEY 271
H + V++RD K N+L++ + K++DFGLA+ G T + T Y AP+
Sbjct: 116 CH--DRRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEIVTLWYRAPDV 171
Query: 272 I-STGHLTTKSDVYSFGVVLLELLTG 296
+ + +T D++S G + E++ G
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 144 EVIFLGQLRHPHLVRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGT 197
E++ + + H +++ L+ E ++ LV E M + +L + I + L
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHER 127
Query: 198 RLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVT 257
+ G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ G++ +T
Sbjct: 128 MSYLLYQMLCGIKHLHSA--GIIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMT 183
Query: 258 TRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLE------LLTGRRSMDKLRPKSEQ 309
V+ Y Y APE I D++S G ++ E L GR +D+ EQ
Sbjct: 184 PYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V HK + + L Q V VKL IE + L V F P
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------P 88
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
LV+L ++ +V E++ G + +HL + S P I +LH
Sbjct: 89 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHS 146
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 147 LD--LIYRDLKPENLLIDEQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILS 199
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 200 KGYNKAVDWWALGVLIYEMAAG 221
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 87/201 (43%), Gaps = 18/201 (8%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD---IEGLQGHREWLAEVIFLGQLRHPH 155
LG G FG V ++ A+K+LD + L+ L E L + P
Sbjct: 50 LGTGSFGRVML------VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
L +L ++ +V E+ P G + +HL +RI R A +LH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHL-RRIGRFXEPHARF-YAAQIVLTFEYLHSL 161
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTG 275
+ +IYRD K N+++D K++DFG AK +G T + GT Y APE I +
Sbjct: 162 D--LIYRDLKPENLMIDQQGYIKVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILSK 214
Query: 276 HLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIE----GLQGHREWLAEVIFLGQLRHP 154
+GEG +G V+K Q + A+K + +E G+ + E+ L +L+H
Sbjct: 10 IGEGTYGVVYKA-------QNNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHS 60
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISV---SLPWGTRLKIAIGAAKGLAF 211
++V+L + +LV+E L+ L K + V L T + G+A+
Sbjct: 61 NIVKLYDVIHTKKRLVLVFE-----HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 212 LHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEY 271
H + V++RD K N+L++ + K++DFGLA+ G T + T Y AP+
Sbjct: 116 CH--DRRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEVVTLWYRAPDV 171
Query: 272 I-STGHLTTKSDVYSFGVVLLELLTG 296
+ + +T D++S G + E++ G
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V HK + + L Q V VKL IE + L V F P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------P 101
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
LV+L ++ +V E++ G + +HL + S P I +LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHS 159
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K N+++D +++DFG AK +G T + GT Y APE I +
Sbjct: 160 LD--LIYRDLKPENLIIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIIIS 212
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAG 234
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIE----GLQGHREWLAEVIFLGQLRHP 154
+GEG +G V+K Q + A+K + +E G+ + E+ L +L+H
Sbjct: 10 IGEGTYGVVYKA-------QNNYGETFALKKIRLEKEDEGIPSTT--IREISILKELKHS 60
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISV---SLPWGTRLKIAIGAAKGLAF 211
++V+L + +LV+E L+ L K + V L T + G+A+
Sbjct: 61 NIVKLYDVIHTKKRLVLVFE-----HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAY 115
Query: 212 LHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEY 271
H + V++RD K N+L++ + K++DFGLA+ G T + T Y AP+
Sbjct: 116 CH--DRRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEVVTLWYRAPDV 171
Query: 272 I-STGHLTTKSDVYSFGVVLLELLTG 296
+ + +T D++S G + E++ G
Sbjct: 172 LMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 11/108 (10%)
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ G++ +T V+ Y Y
Sbjct: 132 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 186
Query: 268 APEYISTGHLTTKSDVYSFGVVLLE------LLTGRRSMDKLRPKSEQ 309
APE I D++S G ++ E L GR +D+ EQ
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 234
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 77/184 (41%), Gaps = 12/184 (6%)
Query: 122 AQAVAVKLLDIEGLQGH-----REWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFM 176
Q AVK++D+ + E L+HPH+V L+ D +V+EFM
Sbjct: 51 GQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 110
Query: 177 PRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFT 236
L + KR + + A + +N +I+RD K +LL S
Sbjct: 111 DGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKEN 170
Query: 237 A---KLSDFGLA-KMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLE 292
+ KL FG+A ++G G V +GT + APE + DV+ GV+L
Sbjct: 171 SAPVKLGGFGVAIQLGESGL---VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFI 227
Query: 293 LLTG 296
LL+G
Sbjct: 228 LLSG 231
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 11/108 (10%)
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ G++ +T V+ Y Y
Sbjct: 131 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 185
Query: 268 APEYISTGHLTTKSDVYSFGVVLLE------LLTGRRSMDKLRPKSEQ 309
APE I D++S G ++ E L GR +D+ EQ
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 233
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 97/225 (43%), Gaps = 30/225 (13%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFLGQLRHPHL 156
+G G G V Y + + VA+K L + + E++ + + H ++
Sbjct: 33 IGSGAQGIVCAAY------DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 157 VRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLA 210
+ L+ E ++ LV E M + +L + I + L + G+
Sbjct: 87 ISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYLLYQMLCGIK 141
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE 270
LH A +I+RD K SNI++ SD T K+ DFGLA+ G++ +T V+ Y Y APE
Sbjct: 142 HLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPE 196
Query: 271 YISTGHLTTKSDVYSFGVVLLE------LLTGRRSMDKLRPKSEQ 309
I D++S G ++ E L GR +D+ EQ
Sbjct: 197 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 241
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 11/108 (10%)
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ G++ +T V+ Y Y
Sbjct: 139 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 193
Query: 268 APEYISTGHLTTKSDVYSFGVVLLE------LLTGRRSMDKLRPKSEQ 309
APE I D++S G ++ E L GR +D+ EQ
Sbjct: 194 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 241
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 11/108 (10%)
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ G++ +T V+ Y Y
Sbjct: 137 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 191
Query: 268 APEYISTGHLTTKSDVYSFGVVLLE------LLTGRRSMDKLRPKSEQ 309
APE I D++S G ++ E L GR +D+ EQ
Sbjct: 192 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 239
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 11/108 (10%)
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ G++ +T V+ Y Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 192
Query: 268 APEYISTGHLTTKSDVYSFGVVLLE------LLTGRRSMDKLRPKSEQ 309
APE I D++S G ++ E L GR +D+ EQ
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 11/108 (10%)
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ G++ +T V+ Y Y
Sbjct: 138 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 192
Query: 268 APEYISTGHLTTKSDVYSFGVVLLE------LLTGRRSMDKLRPKSEQ 309
APE I D++S G ++ E L GR +D+ EQ
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 240
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 11/108 (10%)
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ G++ +T V+ Y Y
Sbjct: 132 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 186
Query: 268 APEYISTGHLTTKSDVYSFGVVLLE------LLTGRRSMDKLRPKSEQ 309
APE I D++S G ++ E L GR +D+ EQ
Sbjct: 187 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 234
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 86/201 (42%), Gaps = 18/201 (8%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD---IEGLQGHREWLAEVIFLGQLRHPH 155
LG G FG V ++ A+K+LD + L+ L E L + P
Sbjct: 50 LGTGSFGRVML------VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
L +L ++ +V E+ P G + +HL + S P I +LH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHSL 161
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTG 275
+ +IYRD K N+++D K++DFG AK +G T + GT Y APE I +
Sbjct: 162 D--LIYRDLKPENLMIDQQGYIKVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILSK 214
Query: 276 HLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 86/201 (42%), Gaps = 18/201 (8%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD---IEGLQGHREWLAEVIFLGQLRHPH 155
LG G FG V ++ A+K+LD + L+ L E L + P
Sbjct: 50 LGTGSFGRVML------VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
L +L ++ +V E+ P G + +HL + S P I +LH
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHSL 161
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTG 275
+ +IYRD K N+++D K++DFG AK +G T + GT Y APE I +
Sbjct: 162 D--LIYRDLKPENLMIDQQGYIKVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILSK 214
Query: 276 HLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 215 GYNKAVDWWALGVLIYEMAAG 235
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 97/225 (43%), Gaps = 30/225 (13%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFLGQLRHPHL 156
+G G G V Y + + VA+K L + + E++ + + H ++
Sbjct: 70 IGSGAQGIVCAAY------DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 123
Query: 157 VRLIGYCC------EDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLA 210
+ L+ E ++ LV E M + +L + I + L + G+
Sbjct: 124 ISLLNVFTPQKTLEEFQDVYLVMELM-----DANLCQVIQMELDHERMSYLLYQMLCGIK 178
Query: 211 FLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPE 270
LH A +I+RD K SNI++ SD T K+ DFGLA+ G++ +T V+ Y Y APE
Sbjct: 179 HLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YRAPE 233
Query: 271 YISTGHLTTKSDVYSFGVVLLE------LLTGRRSMDKLRPKSEQ 309
I D++S G ++ E L GR +D+ EQ
Sbjct: 234 VILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQ 278
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 77/184 (41%), Gaps = 12/184 (6%)
Query: 122 AQAVAVKLLDIEGLQGH-----REWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFM 176
Q AVK++D+ + E L+HPH+V L+ D +V+EFM
Sbjct: 49 GQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFM 108
Query: 177 PRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFT 236
L + KR + + A + +N +I+RD K +LL S
Sbjct: 109 DGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKEN 168
Query: 237 A---KLSDFGLA-KMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLE 292
+ KL FG+A ++G G V +GT + APE + DV+ GV+L
Sbjct: 169 SAPVKLGGFGVAIQLGESGL---VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFI 225
Query: 293 LLTG 296
LL+G
Sbjct: 226 LLSG 229
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 19/213 (8%)
Query: 89 ITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLA-EVIF 147
I + F LG G F V + + AVK + + L+G + E+
Sbjct: 20 IKKIFEFKETLGTGAFSEVVLA------EEKATGKLFAVKCIPKKALKGKESSIENEIAV 73
Query: 148 LGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKR-ISVSLPWGTRLKIAIGAA 206
L +++H ++V L LV + + G L + + ++ T ++ + A
Sbjct: 74 LRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDA- 132
Query: 207 KGLAFLHGAENPVIYRDFKTSNILL---DSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGT 263
+ +LH +++RD K N+L D + +SDFGL+KM +G V + GT
Sbjct: 133 --VYYLH--RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMSTACGT 185
Query: 264 YGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
GY APE ++ + D +S GV+ LL G
Sbjct: 186 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 87/204 (42%), Gaps = 21/204 (10%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVIFLGQLRHPHL 156
LGEG F K QA AVK++ +E +E A + G HP++
Sbjct: 19 LGEGSFSICRKCV------HKKSNQAFAVKIISKRMEA-NTQKEITALKLCEG---HPNI 68
Query: 157 VRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAE 216
V+L + LV E + G L F+RI + I A H +
Sbjct: 69 VKLHEVFHDQLHTFLVMELLNGGEL----FERIKKKKHFSETEASYIMRKLVSAVSHMHD 124
Query: 217 NPVIYRDFKTSNILL---DSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIS 273
V++RD K N+L + + K+ DFG A++ P N + T T YAAPE ++
Sbjct: 125 VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP-DNQPLKTPCF-TLHYAAPELLN 182
Query: 274 TGHLTTKSDVYSFGVVLLELLTGR 297
D++S GV+L +L+G+
Sbjct: 183 QNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 88/202 (43%), Gaps = 20/202 (9%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V HK + + L Q V VKL IE + L V F P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------P 101
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
LV+L ++ +V E++ G + +HL + S P I +LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHS 159
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 160 LD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILS 212
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ ++ G
Sbjct: 213 KGYNKAVDWWALGVLIYQMAAG 234
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 71/171 (41%), Gaps = 17/171 (9%)
Query: 205 AAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY 264
AKG+ FL A I+RD NILL K+ DFGLA+ + +
Sbjct: 209 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 266
Query: 265 GYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRR 324
+ APE I T +SDV+SFGV+L E+ + S P + + L+ R
Sbjct: 267 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS-----PYPGVKIDEEFCRRLKEGTR 321
Query: 325 LRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
+R A Y+ EM L C P RP + +V L +LL
Sbjct: 322 MR-------APDYTT---PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 362
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 17/160 (10%)
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAI 203
EV L +++HP+++ L + +L+ E + G L + L ++ S++ T I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNI-LLDSDF---TAKLSDFGLA---KMGPEGSNTHV 256
G+ +LH + + + D K NI LLD + K+ DFGLA G E N
Sbjct: 124 --LNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--- 176
Query: 257 TTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+ GT + APE ++ L ++D++S GV+ LL+G
Sbjct: 177 ---IFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 71/171 (41%), Gaps = 17/171 (9%)
Query: 205 AAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY 264
AKG+ FL A I+RD NILL K+ DFGLA+ + +
Sbjct: 202 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 259
Query: 265 GYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRR 324
+ APE I T +SDV+SFGV+L E+ + S P + + L+ R
Sbjct: 260 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS-----PYPGVKIDEEFCRRLKEGTR 314
Query: 325 LRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
+R A Y+ EM L C P RP + +V L +LL
Sbjct: 315 MR-------APDYT---TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 355
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ G++ + V+ Y Y
Sbjct: 140 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMVPFVVTRY-YR 194
Query: 268 APEYISTGHLTTKSDVYSFGVVLLELLTG 296
APE I D++S G ++ E++ G
Sbjct: 195 APEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 71/171 (41%), Gaps = 17/171 (9%)
Query: 205 AAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY 264
AKG+ FL A I+RD NILL K+ DFGLA+ + +
Sbjct: 207 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 264
Query: 265 GYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRR 324
+ APE I T +SDV+SFGV+L E+ + S P + + L+ R
Sbjct: 265 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS-----PYPGVKIDEEFCRRLKEGTR 319
Query: 325 LRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
+R A Y+ EM L C P RP + +V L +LL
Sbjct: 320 MR-------APDYT---TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 360
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 102/231 (44%), Gaps = 42/231 (18%)
Query: 87 RAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVI 146
R + ++ + +G+G +G V +G + + VAVK+ + + W E
Sbjct: 4 RTVARDITLLECVGKGRYGEVWRG--------SWQGENVAVKIF---SSRDEKSWFRETE 52
Query: 147 FLG--QLRHPHLVRLIGYCCED-------EERLLVYEFMPRGSLENHLFKRISVSLPWGT 197
LRH ++ +G+ D + L+ + GSL ++L +L +
Sbjct: 53 LYNTVMLRHENI---LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVS 106
Query: 198 RLKIAIGAAKGLAFLH----GAE-NPVI-YRDFKTSNILLDSDFTAKLSDFGLAKMGPEG 251
L+I + A GLA LH G + P I +RD K+ NIL+ + ++D GLA M +
Sbjct: 107 CLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQS 166
Query: 252 SN---THVTTRVMGTYGYAAPEY------ISTGHLTTKSDVYSFGVVLLEL 293
+N RV GT Y APE + + D+++FG+VL E+
Sbjct: 167 TNQLDVGNNPRV-GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 11/108 (10%)
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ G++ +T V+ Y Y
Sbjct: 143 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 197
Query: 268 APEYISTGHLTTKSDVYSFGVVLLE------LLTGRRSMDKLRPKSEQ 309
APE I D++S G ++ E L GR +D+ EQ
Sbjct: 198 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 245
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 71/171 (41%), Gaps = 17/171 (9%)
Query: 205 AAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY 264
AKG+ FL A I+RD NILL K+ DFGLA+ + +
Sbjct: 200 VAKGMEFL--ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 257
Query: 265 GYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRR 324
+ APE I T +SDV+SFGV+L E+ + S P + + L+ R
Sbjct: 258 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS-----PYPGVKIDEEFCRRLKEGTR 312
Query: 325 LRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESLLN 375
+R A Y+ EM L C P RP + +V L +LL
Sbjct: 313 MR-------APDYT---TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 353
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 27/227 (11%)
Query: 80 DFQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHR 139
D + E R I +++ ++G G FG V + + +++ VA+K + LQ R
Sbjct: 31 DGKTGEQREIA--YTNCKVIGNGSFGVVFQAKL-------VESDEVAIK----KVLQDKR 77
Query: 140 EWLAEVIFLGQLRHPHLVRLIGYCC-----EDEERL-LVYEFMPRGSLE-NHLFKRISVS 192
E+ + ++HP++V L + +DE L LV E++P + + ++ +
Sbjct: 78 FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQT 137
Query: 193 LPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDF-TAKLSDFGLAKMGPEG 251
+P + LA++H + +RD K N+LLD KL DFG AK+ G
Sbjct: 138 MPMLLIKLYMYQLLRSLAYIHSIG--ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG 195
Query: 252 SNTHVTTRVMGTYGYAAPEYI-STGHLTTKSDVYSFGVVLLELLTGR 297
+ + Y Y APE I + TT D++S G V+ EL+ G+
Sbjct: 196 EPN--VSXICSRY-YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 11/108 (10%)
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ G++ +T V+ Y Y
Sbjct: 132 GIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-YR 186
Query: 268 APEYISTGHLTTKSDVYSFGVVLLE------LLTGRRSMDKLRPKSEQ 309
APE I D++S G ++ E L GR +D+ EQ
Sbjct: 187 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 234
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 28/219 (12%)
Query: 91 QNFSSNYLL-----GEGGFGTVHKGYIDDDLRQGLK---AQAVAVKLLDIE--GLQGHRE 140
+NF++ Y+L G G F V RQ + Q A K L G E
Sbjct: 24 ENFNNFYILTSKELGRGKFAVV---------RQCISKSTGQEYAAKFLKKRRRGQDCRAE 74
Query: 141 WLAEVIFLGQLRH-PHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRL 199
L E+ L + P ++ L E +L+ E+ G + + ++ + +
Sbjct: 75 ILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVI 134
Query: 200 KIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDF---TAKLSDFGLAKMGPEGSNTHV 256
++ +G+ +LH +N +++ D K NILL S + K+ DFG+++
Sbjct: 135 RLIKQILEGVYYLH--QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELR- 191
Query: 257 TTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLT 295
+MGT Y APE ++ +TT +D+++ G++ LLT
Sbjct: 192 --EIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 19/164 (11%)
Query: 138 HREWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSL---ENHLF---KRISV 191
+ ++ E+ + +++ + + G +E ++YE+M S+ + + F K +
Sbjct: 87 YDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTC 146
Query: 192 SLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEG 251
+P I +++H +N + +RD K SNIL+D + KLSDFG
Sbjct: 147 FIPIQVIKCIIKSVLNSFSYIHNEKN-ICHRDVKPSNILMDKNGRVKLSDFG-------E 198
Query: 252 SNTHVTTRVM---GTYGYAAPEYIS--TGHLTTKSDVYSFGVVL 290
S V ++ GTY + PE+ S + + K D++S G+ L
Sbjct: 199 SEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAI 203
EV L Q+ HP+++ L + +L+ E + G L + L ++ S+S T I
Sbjct: 65 EVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNI-LLDSDF---TAKLSDFGLAKMGPEGSNTHVTTR 259
G+ +LH + + + D K NI LLD + KL DFGLA +G
Sbjct: 125 --LDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KN 177
Query: 260 VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+ GT + APE ++ L ++D++S GV+ LL+G
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ G++ + V+ Y Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRY-YR 192
Query: 268 APEYISTGHLTTKSDVYSFGVVLLE------LLTGRRSMDKLRPKSEQ 309
APE I D++S G ++ E L GR +D+ EQ
Sbjct: 193 APEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 240
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 17/160 (10%)
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAI 203
EV L +++HP+++ L + +L+ E + G L + L ++ S++ T I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNI-LLDSDF---TAKLSDFGLA---KMGPEGSNTHV 256
G+ +LH + + + D K NI LLD + K+ DFGLA G E N
Sbjct: 124 --LNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--- 176
Query: 257 TTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+ GT + APE ++ L ++D++S GV+ LL+G
Sbjct: 177 ---IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 42/231 (18%)
Query: 87 RAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVI 146
R + + +G+G +G V +G + + VAVK+ + + W E
Sbjct: 4 RTVAHQITLLECVGKGRYGEVWRG--------SWQGENVAVKIF---SSRDEKSWFRETE 52
Query: 147 FLG--QLRHPHLVRLIGYCCED-------EERLLVYEFMPRGSLENHLFKRISVSLPWGT 197
LRH ++ +G+ D + L+ + GSL ++L +L +
Sbjct: 53 LYNTVMLRHENI---LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVS 106
Query: 198 RLKIAIGAAKGLAFLH----GAE-NPVI-YRDFKTSNILLDSDFTAKLSDFGLAKMGPEG 251
L+I + A GLA LH G + P I +RD K+ NIL+ + ++D GLA M +
Sbjct: 107 CLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQS 166
Query: 252 SN---THVTTRVMGTYGYAAPEY------ISTGHLTTKSDVYSFGVVLLEL 293
+N RV GT Y APE + + D+++FG+VL E+
Sbjct: 167 TNQLDVGNNPRV-GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 87/201 (43%), Gaps = 18/201 (8%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD---IEGLQGHREWLAEVIFLGQLRHPH 155
LG G FG V ++ A+K+LD + L+ L E L + P
Sbjct: 49 LGTGSFGRVML------VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
LV+L ++ +V E++ G + +HL + S P I +LH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHSL 160
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTG 275
+ +IYRD K N+L+D +++DFG AK +G T + GT Y APE I +
Sbjct: 161 D--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPEIILSK 213
Query: 276 HLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 214 GYNKAVDWWALGVLIYEMAAG 234
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 17/160 (10%)
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAI 203
EV L +++HP+++ L + +L+ E + G L + L ++ S++ T I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNI-LLDSDFTA---KLSDFGLA---KMGPEGSNTHV 256
G+ +LH + + + D K NI LLD + K+ DFGLA G E N
Sbjct: 124 --LNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--- 176
Query: 257 TTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+ GT + APE ++ L ++D++S GV+ LL+G
Sbjct: 177 ---IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 87/202 (43%), Gaps = 20/202 (9%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V HK + + L Q V VKL IE + L V F P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------P 101
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
LV+L ++ +V E++ G + +HL + S P I +LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHS 159
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K N+L+D +++DFG AK +G T + GT Y AP I +
Sbjct: 160 LD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEYLAPAIILS 212
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAG 234
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 42/231 (18%)
Query: 87 RAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVI 146
R + + + +G+G +G V +G + + VAVK+ + + W E
Sbjct: 33 RTVARQITLLECVGKGRYGEVWRG--------SWQGENVAVKIF---SSRDEKSWFRETE 81
Query: 147 FLG--QLRHPHLVRLIGYCCED-------EERLLVYEFMPRGSLENHLFKRISVSLPWGT 197
LRH ++ +G+ D + L+ + GSL ++L +L +
Sbjct: 82 LYNTVMLRHENI---LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQL---TTLDTVS 135
Query: 198 RLKIAIGAAKGLAFLH----GAE-NPVI-YRDFKTSNILLDSDFTAKLSDFGLAKMGPEG 251
L+I + A GLA LH G + P I +RD K+ NIL+ + ++D GLA M +
Sbjct: 136 CLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQS 195
Query: 252 SN---THVTTRVMGTYGYAAPEY------ISTGHLTTKSDVYSFGVVLLEL 293
+N RV GT Y APE + + D+++FG+VL E+
Sbjct: 196 TNQLDVGNNPRV-GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 17/160 (10%)
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAI 203
EV L +++HP+++ L + +L+ E + G L + L ++ S++ T I
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 122
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNI-LLDSDFTA---KLSDFGLA---KMGPEGSNTHV 256
G+ +LH + + + D K NI LLD + K+ DFGLA G E N
Sbjct: 123 --LNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--- 175
Query: 257 TTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+ GT + APE ++ L ++D++S GV+ LL+G
Sbjct: 176 ---IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 17/160 (10%)
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAI 203
EV L +++HP+++ L + +L+ E + G L + L ++ S++ T I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNI-LLDSDFTA---KLSDFGLA---KMGPEGSNTHV 256
G+ +LH + + + D K NI LLD + K+ DFGLA G E N
Sbjct: 124 --LNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--- 176
Query: 257 TTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+ GT + APE ++ L ++D++S GV+ LL+G
Sbjct: 177 ---IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 17/160 (10%)
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAI 203
EV L +++HP+++ L + +L+ E + G L + L ++ S++ T I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNI-LLDSDFTA---KLSDFGLA---KMGPEGSNTHV 256
G+ +LH + + + D K NI LLD + K+ DFGLA G E N
Sbjct: 124 --LNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--- 176
Query: 257 TTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+ GT + APE ++ L ++D++S GV+ LL+G
Sbjct: 177 ---IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 17/160 (10%)
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAI 203
EV L +++HP+++ L + +L+ E + G L + L ++ S++ T I
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 122
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNI-LLDSDFTA---KLSDFGLA---KMGPEGSNTHV 256
G+ +LH + + + D K NI LLD + K+ DFGLA G E N
Sbjct: 123 --LNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--- 175
Query: 257 TTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+ GT + APE ++ L ++D++S GV+ LL+G
Sbjct: 176 ---IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 17/160 (10%)
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAI 203
EV L +++HP+++ L + +L+ E + G L + L ++ S++ T I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNI-LLDSDFTA---KLSDFGLA---KMGPEGSNTHV 256
G+ +LH + + + D K NI LLD + K+ DFGLA G E N
Sbjct: 124 --LNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--- 176
Query: 257 TTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+ GT + APE ++ L ++D++S GV+ LL+G
Sbjct: 177 ---IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 17/160 (10%)
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAI 203
EV L +++HP+++ L + +L+ E + G L + L ++ S++ T I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNI-LLDSDFTA---KLSDFGLA---KMGPEGSNTHV 256
G+ +LH + + + D K NI LLD + K+ DFGLA G E N
Sbjct: 124 --LNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--- 176
Query: 257 TTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+ GT + APE ++ L ++D++S GV+ LL+G
Sbjct: 177 ---IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 17/160 (10%)
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAI 203
EV L +++HP+++ L + +L+ E + G L + L ++ S++ T I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNI-LLDSDFTA---KLSDFGLA---KMGPEGSNTHV 256
G+ +LH + + + D K NI LLD + K+ DFGLA G E N
Sbjct: 124 --LNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--- 176
Query: 257 TTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+ GT + APE ++ L ++D++S GV+ LL+G
Sbjct: 177 ---IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 208 GLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYA 267
G+ LH A +I+RD K SNI++ SD T K+ DFGLA+ G++ + V+ Y Y
Sbjct: 138 GIKHLHSA--GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRY-YR 192
Query: 268 APEYISTGHLTTKSDVYSFGVVLLE------LLTGRRSMDKLRPKSEQ 309
APE I D++S G ++ E L GR +D+ EQ
Sbjct: 193 APEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 240
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 17/160 (10%)
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAI 203
EV L +++HP+++ L + +L+ E + G L + L ++ S++ T I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNI-LLDSDFTA---KLSDFGLA---KMGPEGSNTHV 256
G+ +LH + + + D K NI LLD + K+ DFGLA G E N
Sbjct: 124 --LNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--- 176
Query: 257 TTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+ GT + APE ++ L ++D++S GV+ LL+G
Sbjct: 177 ---IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 17/160 (10%)
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAI 203
EV L +++HP+++ L + +L+ E + G L + L ++ S++ T I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNI-LLDSDFTA---KLSDFGLA---KMGPEGSNTHV 256
G+ +LH + + + D K NI LLD + K+ DFGLA G E N
Sbjct: 124 --LNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--- 176
Query: 257 TTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+ GT + APE ++ L ++D++S GV+ LL+G
Sbjct: 177 ---IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 17/160 (10%)
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAI 203
EV L +++HP+++ L + +L+ E + G L + L ++ S++ T I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNI-LLDSDFTA---KLSDFGLA---KMGPEGSNTHV 256
G+ +LH + + + D K NI LLD + K+ DFGLA G E N
Sbjct: 124 --LNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--- 176
Query: 257 TTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+ GT + APE ++ L ++D++S GV+ LL+G
Sbjct: 177 ---IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 112/287 (39%), Gaps = 44/287 (15%)
Query: 96 NYL--LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIE--GLQGHREWLAEVIFLGQL 151
N+L L E G + KG + + VK+L + + R++ E L
Sbjct: 13 NFLTKLNENHSGELWKGR--------WQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIF 64
Query: 152 RHPHLVRLIGYCCEDE--ERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGL 209
HP+++ ++G C L+ + P GSL N L + + + +K A+ A+G
Sbjct: 65 SHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGX 124
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLS--DFGLAKMGPEGSNTHVTTRVMGTYGYA 267
AFLH E + + ++ +D D TA++S D + P R +
Sbjct: 125 AFLHTLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSP--------GRXYAP-AWV 175
Query: 268 APEYISTGHLTTK---SDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRR 324
APE + T +D +SF V+L EL+T L N K L
Sbjct: 176 APEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADL-----SNXEIGXKVALEG--- 227
Query: 325 LRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLE 371
LR + P ++ S L C + +P RPK +V LE
Sbjct: 228 LRPTIPPGISPHVS--------KLXKICXNEDPAKRPKFDXIVPILE 266
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 87/202 (43%), Gaps = 20/202 (9%)
Query: 99 LGEGGFGTV----HKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHP 154
LG G FG V HK + + L Q V VKL IE + L V F P
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQAVNF------P 101
Query: 155 HLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHG 214
LV+L ++ +V E++ G + +HL + S P I +LH
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT--FEYLHS 159
Query: 215 AENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIST 274
+ +IYRD K N+L+D +++DFG AK +G T + GT APE I +
Sbjct: 160 LD--LIYRDLKPENLLIDQQGYIQVTDFGFAKR-VKGR----TWXLCGTPEALAPEIILS 212
Query: 275 GHLTTKSDVYSFGVVLLELLTG 296
D ++ GV++ E+ G
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAG 234
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 17/160 (10%)
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAI 203
EV L +++HP+++ L + +L+ E + G L + L ++ S++ T I
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNI-LLDSDFTA---KLSDFGLA---KMGPEGSNTHV 256
G+ +LH + + + D K NI LLD + K+ DFGLA G E N
Sbjct: 124 --LNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN--- 176
Query: 257 TTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+ GT + APE ++ L ++D++S GV+ LL+G
Sbjct: 177 ---IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 17/214 (7%)
Query: 88 AITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQG--HREWLAEV 145
++T + +G+G F V + + A K+++ + L H++ E
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCV------KLCTGHEYAAKIINTKKLSARDHQKLEREA 54
Query: 146 IFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGA 205
L+H ++VRL E+ LV++ + G L + R S + I
Sbjct: 55 RICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE 114
Query: 206 AKGLAFLHGAENPVIYRDFKTSNILLDSDF---TAKLSDFGLAKMGPEGSNTHVTTRVMG 262
A LH + V++RD K N+LL S KL+DFGLA + +G + G
Sbjct: 115 A----VLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQG-DQQAWFGFAG 168
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
T GY +PE + D+++ GV+L LL G
Sbjct: 169 TPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 109/264 (41%), Gaps = 38/264 (14%)
Query: 121 KAQAVAVKLLDIEGL--QGHREWLAEVIFLGQLRH--PHLVRLIGYCCEDEERLLVYEFM 176
K Q A+K +++E Q + E+ +L +L+ ++RL Y D+ +Y M
Sbjct: 79 KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVM 135
Query: 177 PRGSLE-NHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDF 235
G+++ N K+ PW R + + +H ++ +++ D K +N L+ D
Sbjct: 136 ECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIH--QHGIVHSDLKPANFLI-VDG 191
Query: 236 TAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKS-----------DVY 284
KL DFG+A + + V +GT Y PE I + ++ DV+
Sbjct: 192 MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVW 251
Query: 285 SFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAGQYSVKGAKE 344
S G +L + G+ ++ + +L I+DP ++ K+
Sbjct: 252 SLGCILYYMTYGKTPFQQI---------------INQISKLHAIIDPNHEIEFPDIPEKD 296
Query: 345 MAVLALQCISVNPKDRPKMAAVVA 368
+ + C+ +PK R + ++A
Sbjct: 297 LQDVLKCCLKRDPKQRISIPELLA 320
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 33/215 (15%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFLGQLRHPHL 156
+G+G FG V K R Q VA+K L++ E L E+ L L+H ++
Sbjct: 26 IGQGTFGEVFKA------RHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 157 VRLIGYC---------CEDEERLLVYEFMPR---GSLENHLFKRISVSLPWGTRLKIAIG 204
V LI C C+ LV++F G L N L K + ++
Sbjct: 80 VNLIEICRTKASPYNRCKGS-IYLVFDFCEHDLAGLLSNVLVKFTLSEIK-----RVMQM 133
Query: 205 AAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTH---VTTRVM 261
GL ++H N +++RD K +N+L+ D KL+DFGLA+ N+ RV+
Sbjct: 134 LLNGLYYIH--RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 262 GTYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLT 295
T Y PE + D++ G ++ E+ T
Sbjct: 192 -TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 107/243 (44%), Gaps = 29/243 (11%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG GG G V +D+D + VA+K + + Q + L E+ + +L H ++V+
Sbjct: 19 LGCGGNGLVFSA-VDNDCDK-----RVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 159 L--------------IGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIG 204
+ +G E +V E+M L N L + L RL
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVLEQ--GPLLEEHARL-FMYQ 128
Query: 205 AAKGLAFLHGAENPVIYRDFKTSNILLDS-DFTAKLSDFGLAK-MGPEGSNTHVTTRVMG 262
+GL ++H A V++RD K +N+ +++ D K+ DFGLA+ M P S+ + +
Sbjct: 129 LLRGLKYIHSAN--VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV 186
Query: 263 TYGYAAPEYI-STGHLTTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRS 321
T Y +P + S + T D+++ G + E+LTG+ + L+ + P +
Sbjct: 187 TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHE 246
Query: 322 SRR 324
R
Sbjct: 247 EDR 249
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 33/215 (15%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFLGQLRHPHL 156
+G+G FG V K R Q VA+K L++ E L E+ L L+H ++
Sbjct: 26 IGQGTFGEVFKA------RHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 157 VRLIGYC---------CEDEERLLVYEFMPR---GSLENHLFKRISVSLPWGTRLKIAIG 204
V LI C C+ LV++F G L N L K + ++
Sbjct: 80 VNLIEICRTKASPYNRCK-ASIYLVFDFCEHDLAGLLSNVLVKFTLSEIK-----RVMQM 133
Query: 205 AAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTH---VTTRVM 261
GL ++H N +++RD K +N+L+ D KL+DFGLA+ N+ RV+
Sbjct: 134 LLNGLYYIH--RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 262 GTYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLT 295
T Y PE + D++ G ++ E+ T
Sbjct: 192 -TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 109/264 (41%), Gaps = 38/264 (14%)
Query: 121 KAQAVAVKLLDIEGL--QGHREWLAEVIFLGQLRH--PHLVRLIGYCCEDEERLLVYEFM 176
K Q A+K +++E Q + E+ +L +L+ ++RL Y D+ +Y M
Sbjct: 79 KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVM 135
Query: 177 PRGSLE-NHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDF 235
G+++ N K+ PW R + + +H ++ +++ D K +N L+ D
Sbjct: 136 ECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIH--QHGIVHSDLKPANFLI-VDG 191
Query: 236 TAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKS-----------DVY 284
KL DFG+A + + V +GT Y PE I + ++ DV+
Sbjct: 192 MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVW 251
Query: 285 SFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAGQYSVKGAKE 344
S G +L + G+ ++ + +L I+DP ++ K+
Sbjct: 252 SLGCILYYMTYGKTPFQQI---------------INQISKLHAIIDPNHEIEFPDIPEKD 296
Query: 345 MAVLALQCISVNPKDRPKMAAVVA 368
+ + C+ +PK R + ++A
Sbjct: 297 LQDVLKCCLKRDPKQRISIPELLA 320
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 86/160 (53%), Gaps = 14/160 (8%)
Query: 144 EVIFLGQLRHPHLVRLIGYCCE-DEERL-LVYEFMPRGS-LENHLFKRISVSLPWGTRLK 200
E+ L +L HP++V+L+ + +E+ L +V+E + +G +E K +S R
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSED---QARFY 142
Query: 201 IAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRV 260
KG+ +LH + +I+RD K SN+L+ D K++DFG++ +GS+ ++ V
Sbjct: 143 FQ-DLIKGIEYLHYQK--IIHRDIKPSNLLVGEDGHIKIADFGVSNEF-KGSDALLSNTV 198
Query: 261 MGTYGYAAPEYISTGH--LTTKS-DVYSFGVVLLELLTGR 297
GT + APE +S + K+ DV++ GV L + G+
Sbjct: 199 -GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 120/290 (41%), Gaps = 43/290 (14%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIE--GLQGHREWLAEVIFLGQLRHPH 155
L+G+G FG V+ G + VA++L+DIE + + EV+ Q RH +
Sbjct: 40 LIGKGRFGQVYHGRWHGE---------VAIRLIDIERDNEDQLKAFKREVMAYRQTRHEN 90
Query: 156 LVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGA 215
+V +G C L + + +G + + + L +IA KG+ +LH
Sbjct: 91 VVLFMG-ACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHA- 148
Query: 216 ENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGP--EGSNTHVTTRVM-GTYGYAAPEYI 272
++++D K+ N+ D+ ++DFGL + + R+ G + APE I
Sbjct: 149 -KGILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEII 206
Query: 273 STGHLTTK---------SDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSR 323
T+ SDV++ G + EL R K +P + W
Sbjct: 207 RQLSPDTEEDKLPFSKHSDVFALGTIWYEL-HAREWPFKTQPAEA---IIW--------- 253
Query: 324 RLRYIVDPRLAGQYSVKGAKEMAVLALQCISVNPKDRPKMAAVVATLESL 373
++ + P L+ + KE++ + L C + ++RP ++ LE L
Sbjct: 254 QMGTGMKPNLS---QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKL 300
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 109/264 (41%), Gaps = 38/264 (14%)
Query: 121 KAQAVAVKLLDIEGL--QGHREWLAEVIFLGQLRH--PHLVRLIGYCCEDEERLLVYEFM 176
K Q A+K +++E Q + E+ +L +L+ ++RL Y D+ +Y M
Sbjct: 35 KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVM 91
Query: 177 PRGSLE-NHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDF 235
G+++ N K+ PW R + + +H ++ +++ D K +N L+ D
Sbjct: 92 ECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIH--QHGIVHSDLKPANFLI-VDG 147
Query: 236 TAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKS-----------DVY 284
KL DFG+A + + V +GT Y PE I + ++ DV+
Sbjct: 148 MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVW 207
Query: 285 SFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAGQYSVKGAKE 344
S G +L + G+ ++ + +L I+DP ++ K+
Sbjct: 208 SLGCILYYMTYGKTPFQQI---------------INQISKLHAIIDPNHEIEFPDIPEKD 252
Query: 345 MAVLALQCISVNPKDRPKMAAVVA 368
+ + C+ +PK R + ++A
Sbjct: 253 LQDVLKCCLKRDPKQRISIPELLA 276
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 109/264 (41%), Gaps = 38/264 (14%)
Query: 121 KAQAVAVKLLDIEGL--QGHREWLAEVIFLGQLRH--PHLVRLIGYCCEDEERLLVYEFM 176
K Q A+K +++E Q + E+ +L +L+ ++RL Y D+ +Y M
Sbjct: 32 KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVM 88
Query: 177 PRGSLE-NHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDF 235
G+++ N K+ PW R + + +H ++ +++ D K +N L+ D
Sbjct: 89 ECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIH--QHGIVHSDLKPANFLI-VDG 144
Query: 236 TAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKS-----------DVY 284
KL DFG+A + + V +GT Y PE I + ++ DV+
Sbjct: 145 MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVW 204
Query: 285 SFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAGQYSVKGAKE 344
S G +L + G+ ++ + +L I+DP ++ K+
Sbjct: 205 SLGCILYYMTYGKTPFQQI---------------INQISKLHAIIDPNHEIEFPDIPEKD 249
Query: 345 MAVLALQCISVNPKDRPKMAAVVA 368
+ + C+ +PK R + ++A
Sbjct: 250 LQDVLKCCLKRDPKQRISIPELLA 273
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 33/215 (15%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFLGQLRHPHL 156
+G+G FG V K R Q VA+K L++ E L E+ L L+H ++
Sbjct: 26 IGQGTFGEVFKA------RHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 157 VRLIGYC---------CEDEERLLVYEFMPR---GSLENHLFKRISVSLPWGTRLKIAIG 204
V LI C C+ LV++F G L N L K + ++
Sbjct: 80 VNLIEICRTKASPYNRCKGS-IYLVFDFCEHDLAGLLSNVLVKFTLSEIK-----RVMQM 133
Query: 205 AAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTH---VTTRVM 261
GL ++H N +++RD K +N+L+ D KL+DFGLA+ N+ RV+
Sbjct: 134 LLNGLYYIH--RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 262 GTYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLT 295
T Y PE + D++ G ++ E+ T
Sbjct: 192 -TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 109/264 (41%), Gaps = 38/264 (14%)
Query: 121 KAQAVAVKLLDIEGL--QGHREWLAEVIFLGQLRH--PHLVRLIGYCCEDEERLLVYEFM 176
K Q A+K +++E Q + E+ +L +L+ ++RL Y D+ +Y M
Sbjct: 51 KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVM 107
Query: 177 PRGSLE-NHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDF 235
G+++ N K+ PW R + + +H ++ +++ D K +N L+ D
Sbjct: 108 ECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIH--QHGIVHSDLKPANFLI-VDG 163
Query: 236 TAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKS-----------DVY 284
KL DFG+A + + V +GT Y PE I + ++ DV+
Sbjct: 164 MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVW 223
Query: 285 SFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAGQYSVKGAKE 344
S G +L + G+ ++ + +L I+DP ++ K+
Sbjct: 224 SLGCILYYMTYGKTPFQQI---------------INQISKLHAIIDPNHEIEFPDIPEKD 268
Query: 345 MAVLALQCISVNPKDRPKMAAVVA 368
+ + C+ +PK R + ++A
Sbjct: 269 LQDVLKCCLKRDPKQRISIPELLA 292
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 33/215 (15%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVK--LLDIEGLQGHREWLAEVIFLGQLRHPHL 156
+G+G FG V K R Q VA+K L++ E L E+ L L+H ++
Sbjct: 25 IGQGTFGEVFKA------RHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 78
Query: 157 VRLIGYC---------CEDEERLLVYEFMPR---GSLENHLFKRISVSLPWGTRLKIAIG 204
V LI C C+ LV++F G L N L K + ++
Sbjct: 79 VNLIEICRTKASPYNRCKGS-IYLVFDFCEHDLAGLLSNVLVKFTLSEIK-----RVMQM 132
Query: 205 AAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTH---VTTRVM 261
GL ++H N +++RD K +N+L+ D KL+DFGLA+ N+ RV+
Sbjct: 133 LLNGLYYIH--RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 190
Query: 262 GTYGYAAPE-YISTGHLTTKSDVYSFGVVLLELLT 295
T Y PE + D++ G ++ E+ T
Sbjct: 191 -TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 144 EVIFLGQLRHPHLVRL--IGYCCEDEERLLVYEFMPRGSLENHLFKRIS------VSLPW 195
E+ L +L+HP+++ L + D + L++++ F R S V LP
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPR 127
Query: 196 GTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFT----AKLSDFGLAKM--GP 249
G + G+ +LH N V++RD K +NIL+ + K++D G A++ P
Sbjct: 128 GMVKSLLYQILDGIHYLHA--NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSP 185
Query: 250 EGSNTHVTTRVMGTYGYAAPEYI-STGHLTTKSDVYSFGVVLLELLTG 296
+ V+ T+ Y APE + H T D+++ G + ELLT
Sbjct: 186 LKPLADLDP-VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 81/206 (39%), Gaps = 27/206 (13%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+G G FG +R L + VAVK ++ G E+I LRHP++VR
Sbjct: 28 IGSGNFGVARL------MRDKLTKELVAVKYIE-RGAAIDENVQREIINHRSLRHPNIVR 80
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHL-----FKRISVSLPWGTRLKIAIGAAKGLAFLH 213
++ E+ G L + F + L G+++ H
Sbjct: 81 FKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLL-------SGVSYCH 133
Query: 214 GAENPVIYRDFKTSNILLDSDFTA--KLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEY 271
+ + +RD K N LLD K+ DFG +K S T +GT Y APE
Sbjct: 134 SMQ--ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEV 188
Query: 272 ISTGHLTTK-SDVYSFGVVLLELLTG 296
+ K +DV+S GV L +L G
Sbjct: 189 LLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 100/247 (40%), Gaps = 35/247 (14%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+G G FG +R + VAVK ++ G + E+I LRHP++VR
Sbjct: 26 IGSGNFGVARL------MRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSLRHPNIVR 78
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWG---TRLKIAIGAAKGLAFLHGA 215
+V E+ G LF+RI + + R G+++ H
Sbjct: 79 FKEVILTPTHLAIVMEYASGGE----LFERICNAGRFSEDEARFFFQ-QLISGVSYCHAM 133
Query: 216 ENPVIYRDFKTSNILLDSDFTA--KLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIS 273
+ V +RD K N LLD K+ DFG +K S T +GT Y APE +
Sbjct: 134 Q--VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEVLL 188
Query: 274 TGHLTTK-SDVYSFGVVLLELLTGRRSMDKLRPKSEQNL---------VDWAKP-YLRSS 322
K +DV+S GV L +L G + P+ +N V +A P Y+ S
Sbjct: 189 KKEYDGKVADVWSCGVTLYVMLVGAYPFED--PEEPKNFRKTIHRILNVQYAIPDYVHIS 246
Query: 323 RRLRYIV 329
R+++
Sbjct: 247 PECRHLI 253
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 109/264 (41%), Gaps = 38/264 (14%)
Query: 121 KAQAVAVKLLDIEGL--QGHREWLAEVIFLGQLRH--PHLVRLIGYCCEDEERLLVYEFM 176
K Q A+K +++E Q + E+ +L +L+ ++RL Y D+ +Y M
Sbjct: 31 KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVM 87
Query: 177 PRGSLE-NHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDF 235
G+++ N K+ PW R + + +H ++ +++ D K +N L+ D
Sbjct: 88 ECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIH--QHGIVHSDLKPANFLI-VDG 143
Query: 236 TAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKS-----------DVY 284
KL DFG+A + + V +GT Y PE I + ++ DV+
Sbjct: 144 MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVW 203
Query: 285 SFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAGQYSVKGAKE 344
S G +L + G+ ++ + +L I+DP ++ K+
Sbjct: 204 SLGCILYYMTYGKTPFQQI---------------INQISKLHAIIDPNHEIEFPDIPEKD 248
Query: 345 MAVLALQCISVNPKDRPKMAAVVA 368
+ + C+ +PK R + ++A
Sbjct: 249 LQDVLKCCLKRDPKQRISIPELLA 272
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 100/247 (40%), Gaps = 35/247 (14%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+G G FG +R + VAVK ++ G + E+I LRHP++VR
Sbjct: 27 IGSGNFGVARL------MRDKQSNELVAVKYIE-RGEKIAANVKREIINHRSLRHPNIVR 79
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWG---TRLKIAIGAAKGLAFLHGA 215
+V E+ G LF+RI + + R G+++ H
Sbjct: 80 FKEVILTPTHLAIVMEYASGGE----LFERICNAGRFSEDEARFFFQ-QLISGVSYCHAM 134
Query: 216 ENPVIYRDFKTSNILLDSDFTA--KLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIS 273
+ V +RD K N LLD K+ DFG +K S T +GT Y APE +
Sbjct: 135 Q--VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST---VGTPAYIAPEVLL 189
Query: 274 TGHLTTK-SDVYSFGVVLLELLTGRRSMDKLRPKSEQNL---------VDWAKP-YLRSS 322
K +DV+S GV L +L G + P+ +N V +A P Y+ S
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFED--PEEPKNFRKTIHRILNVQYAIPDYVHIS 247
Query: 323 RRLRYIV 329
R+++
Sbjct: 248 PECRHLI 254
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAI 203
EV L Q+ H +++ L + +L+ E + G L + L ++ S+S T I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNI-LLDSDF---TAKLSDFGLAKMGPEGSNTHVTTR 259
G+ +LH + + + D K NI LLD + KL DFGLA +G
Sbjct: 125 --LDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KN 177
Query: 260 VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+ GT + APE ++ L ++D++S GV+ LL+G
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 102/248 (41%), Gaps = 37/248 (14%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+G G FG +R + VAVK ++ G + E+I LRHP++VR
Sbjct: 27 IGAGNFGVARL------MRDKQANELVAVKYIE-RGEKIDENVKREIINHRSLRHPNIVR 79
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWG---TRLKIAIGAAKGLAFLHGA 215
+V E+ G LF+RI + + R G+++ H
Sbjct: 80 FKEVILTPTHLAIVMEYASGGE----LFERICNAGRFSEDEARFFFQ-QLISGVSYAHAM 134
Query: 216 ENPVIYRDFKTSNILLDSDFTA--KLSDFGLAKMGPEGSNTHVTTR-VMGTYGYAAPEYI 272
+ V +RD K N LLD K++DFG +K S H + +GT Y APE +
Sbjct: 135 Q--VAHRDLKLENTLLDGSPAPRLKIADFGYSK----ASVLHSQPKSAVGTPAYIAPEVL 188
Query: 273 STGHLTTK-SDVYSFGVVLLELLTGRRSMDKLRPKSEQNL---------VDWAKP-YLRS 321
K +DV+S GV L +L G + P+ +N V +A P Y+
Sbjct: 189 LKKEYDGKVADVWSCGVTLYVMLVGAYPFED--PEEPKNFRKTIHRILNVQYAIPDYVHI 246
Query: 322 SRRLRYIV 329
S R+++
Sbjct: 247 SPECRHLI 254
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAI 203
EV L Q+ H +++ L + +L+ E + G L + L ++ S+S T I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNI-LLDSDF---TAKLSDFGLAKMGPEGSNTHVTTR 259
G+ +LH + + + D K NI LLD + KL DFGLA +G
Sbjct: 125 --LDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KN 177
Query: 260 VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+ GT + APE ++ L ++D++S GV+ LL+G
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAI 203
EV L Q+ H +++ L + +L+ E + G L + L ++ S+S T I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNI-LLDSDF---TAKLSDFGLAKMGPEGSNTHVTTR 259
G+ +LH + + + D K NI LLD + KL DFGLA +G
Sbjct: 125 --LDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KN 177
Query: 260 VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+ GT + APE ++ L ++D++S GV+ LL+G
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 111/265 (41%), Gaps = 40/265 (15%)
Query: 121 KAQAVAVKLLDIEGL--QGHREWLAEVIFLGQLRH--PHLVRLIGYCCEDEERLLVYEFM 176
K Q A+K +++E Q + E+ +L +L+ ++RL Y D+ +Y M
Sbjct: 51 KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVM 107
Query: 177 PRGSLE-NHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDF 235
G+++ N K+ PW R + + +H ++ +++ D K +N L+ D
Sbjct: 108 ECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIH--QHGIVHSDLKPANFLI-VDG 163
Query: 236 TAKLSDFGLA-KMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKS-----------DV 283
KL DFG+A +M P+ V +GT Y PE I + ++ DV
Sbjct: 164 MLKLIDFGIANQMQPDXXXV-VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDV 222
Query: 284 YSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAGQYSVKGAK 343
+S G +L + G+ ++ + +L I+DP ++ K
Sbjct: 223 WSLGCILYYMTYGKTPFQQI---------------INQISKLHAIIDPNHEIEFPDIPEK 267
Query: 344 EMAVLALQCISVNPKDRPKMAAVVA 368
++ + C+ +PK R + ++A
Sbjct: 268 DLQDVLKCCLKRDPKQRISIPELLA 292
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAI 203
EV L Q+ H +++ L + +L+ E + G L + L ++ S+S T I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNI-LLDSDF---TAKLSDFGLAKMGPEGSNTHVTTR 259
G+ +LH + + + D K NI LLD + KL DFGLA +G
Sbjct: 125 --LDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KN 177
Query: 260 VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+ GT + APE ++ L ++D++S GV+ LL+G
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 108/264 (40%), Gaps = 38/264 (14%)
Query: 121 KAQAVAVKLLDIEGL--QGHREWLAEVIFLGQLRH--PHLVRLIGYCCEDEERLLVYEFM 176
K Q A+K +++E Q + E+ +L +L+ ++RL Y D+ +Y M
Sbjct: 79 KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVM 135
Query: 177 PRGSLE-NHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDF 235
G+++ N K+ PW R + + +H ++ +++ D K +N L+ D
Sbjct: 136 ECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTIH--QHGIVHSDLKPANFLI-VDG 191
Query: 236 TAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKS-----------DVY 284
KL DFG+A + + V +G Y PE I + ++ DV+
Sbjct: 192 MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVW 251
Query: 285 SFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYIVDPRLAGQYSVKGAKE 344
S G +L + G+ ++ + +L I+DP ++ K+
Sbjct: 252 SLGCILYYMTYGKTPFQQI---------------INQISKLHAIIDPNHEIEFPDIPEKD 296
Query: 345 MAVLALQCISVNPKDRPKMAAVVA 368
+ + C+ +PK R + ++A
Sbjct: 297 LQDVLKCCLKRDPKQRISIPELLA 320
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
Query: 144 EVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAI 203
EV L Q+ H +++ L + +L+ E + G L + L ++ S+S T I
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNI-LLDSDF---TAKLSDFGLAKMGPEGSNTHVTTR 259
G+ +LH + + + D K NI LLD + KL DFGLA +G
Sbjct: 125 --LDGVNYLHTKK--IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KN 177
Query: 260 VMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
+ GT + APE ++ L ++D++S GV+ LL+G
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 9/130 (6%)
Query: 170 LLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNI 229
L++ E M G L + + +R + +I + FLH + + +RD K N+
Sbjct: 83 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS--HNIAHRDVKPENL 140
Query: 230 LLDS---DFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSF 286
L S D KL+DFG AK E + + T Y Y APE + D++S
Sbjct: 141 LYTSKEKDAVLKLTDFGFAK---ETTQNALQTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 196
Query: 287 GVVLLELLTG 296
GV++ LL G
Sbjct: 197 GVIMYILLCG 206
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 9/130 (6%)
Query: 170 LLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNI 229
L++ E M G L + + +R + +I + FLH + + +RD K N+
Sbjct: 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS--HNIAHRDVKPENL 159
Query: 230 LLDS---DFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSF 286
L S D KL+DFG AK E + + T Y Y APE + D++S
Sbjct: 160 LYTSKEKDAVLKLTDFGFAK---ETTQNALQTPCYTPY-YVAPEVLGPEKYDKSCDMWSL 215
Query: 287 GVVLLELLTG 296
GV++ LL G
Sbjct: 216 GVIMYILLCG 225
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 15/176 (8%)
Query: 126 AVKLLDIEGLQGHREWLAEV-IFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENH 184
AVK++D + R+ E+ I L +HP+++ L + + +V E M G L +
Sbjct: 51 AVKIID----KSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDK 106
Query: 185 LFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDF----TAKLS 240
+ ++ S + + I K + +LH V++RD K SNIL + + ++
Sbjct: 107 ILRQKFFSEREASAVLFTI--TKTVEYLHA--QGVVHRDLKPSNILYVDESGNPESIRIC 162
Query: 241 DFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
DFG AK N + T T + APE + D++S GV+L +LTG
Sbjct: 163 DFGFAKQ-LRAENGLLMTPCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 37/218 (16%)
Query: 139 REWLAEVIFLGQLRHPHLVRLIGYCCE-----DEERLLVYEFMPRGSLENHLFKRISVSL 193
R++LAEV+ HP +V++ + D +V E++ SL+ +++ V+
Sbjct: 130 RQFLAEVV------HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAE 183
Query: 194 PWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSN 253
L+I L++LH ++Y D K NI+L ++ KL D G S
Sbjct: 184 AIAYLLEI----LPALSYLHSIG--LVYNDLKPENIML-TEEQLKLIDLGAV------SR 230
Query: 254 THVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVL----LELLT-GRRSMDKLRPKSE 308
+ + GT G+ APE + TG T +D+Y+ G L L+L T R +D L P+ +
Sbjct: 231 INSFGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL-PEDD 288
Query: 309 QNLVDWAKPYLRSSRRLRYIVDPRLAGQYSVKGAKEMA 346
L K Y R LR +DP +++ A+EM+
Sbjct: 289 PVL----KTYDSYGRLLRRAIDPDPRQRFTT--AEEMS 320
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 20/154 (12%)
Query: 154 PHLVRLI--------GYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGA 205
PH+VR++ G C L+V E + G L + + R + +I
Sbjct: 121 PHIVRIVDVYENLYAGRKC----LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 176
Query: 206 AKGLAFLHGAENPVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
+ + +LH + +RD K N+L S + KL+DFG AK S+ +TT
Sbjct: 177 GEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYT 232
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
Y Y APE + D++S GV++ LL G
Sbjct: 233 PY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 265
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 20/154 (12%)
Query: 154 PHLVRLI--------GYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGA 205
PH+VR++ G C L+V E + G L + + R + +I
Sbjct: 115 PHIVRIVDVYENLYAGRKC----LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 170
Query: 206 AKGLAFLHGAENPVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
+ + +LH + +RD K N+L S + KL+DFG AK S+ +TT
Sbjct: 171 GEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYT 226
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
Y Y APE + D++S GV++ LL G
Sbjct: 227 PY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 20/154 (12%)
Query: 154 PHLVRLI--------GYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGA 205
PH+VR++ G C L+V E + G L + + R + +I
Sbjct: 71 PHIVRIVDVYENLYAGRKC----LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 126
Query: 206 AKGLAFLHGAENPVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
+ + +LH + +RD K N+L S + KL+DFG AK S+ +TT
Sbjct: 127 GEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYT 182
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
Y Y APE + D++S GV++ LL G
Sbjct: 183 PY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 20/154 (12%)
Query: 154 PHLVRLI--------GYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGA 205
PH+VR++ G C L+V E + G L + + R + +I
Sbjct: 76 PHIVRIVDVYENLYAGRKC----LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 131
Query: 206 AKGLAFLHGAENPVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
+ + +LH + +RD K N+L S + KL+DFG AK S+ +TT
Sbjct: 132 GEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYT 187
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
Y Y APE + D++S GV++ LL G
Sbjct: 188 PY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 220
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 77 DLYDFQLSELRAITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEG 134
+LY FQ S I Q ++ +G G +G V +++G + + A K+ +E
Sbjct: 13 NLY-FQGSTKGDINQYYTLENTIGRGSWGEVKIA-----VQKGTRIRRAAKKIPKYFVED 66
Query: 135 LQGHREWLAEVIFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSL-ENHLFKRISVSL 193
+ ++ E+ + L HP+++RL ++ + LV E G L E + KR+
Sbjct: 67 VDRFKQ---EIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRES 123
Query: 194 PWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILL--DS-DFTAKLSDFGLAKMGPE 250
+K + A +A+ H V +RD K N L DS D KL DFGLA
Sbjct: 124 DAARIMKDVLSA---VAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP 178
Query: 251 GSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
G + T+V GT Y +P+ + G + D +S GV++ LL G
Sbjct: 179 GK--MMRTKV-GTPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCG 220
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 20/154 (12%)
Query: 154 PHLVRLI--------GYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGA 205
PH+VR++ G C L+V E + G L + + R + +I
Sbjct: 75 PHIVRIVDVYENLYAGRKC----LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 130
Query: 206 AKGLAFLHGAENPVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
+ + +LH + +RD K N+L S + KL+DFG AK S+ +TT
Sbjct: 131 GEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYT 186
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
Y Y APE + D++S GV++ LL G
Sbjct: 187 PY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 219
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 20/154 (12%)
Query: 154 PHLVRLI--------GYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGA 205
PH+VR++ G C L+V E + G L + + R + +I
Sbjct: 77 PHIVRIVDVYENLYAGRKC----LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 132
Query: 206 AKGLAFLHGAENPVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
+ + +LH + +RD K N+L S + KL+DFG AK S+ +TT
Sbjct: 133 GEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYT 188
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
Y Y APE + D++S GV++ LL G
Sbjct: 189 PY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 221
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 20/154 (12%)
Query: 154 PHLVRLI--------GYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGA 205
PH+VR++ G C L+V E + G L + + R + +I
Sbjct: 71 PHIVRIVDVYENLYAGRKC----LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 126
Query: 206 AKGLAFLHGAENPVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
+ + +LH + +RD K N+L S + KL+DFG AK S+ +TT
Sbjct: 127 GEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYT 182
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
Y Y APE + D++S GV++ LL G
Sbjct: 183 PY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 20/154 (12%)
Query: 154 PHLVRLI--------GYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGA 205
PH+VR++ G C L+V E + G L + + R + +I
Sbjct: 69 PHIVRIVDVYENLYAGRKC----LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 124
Query: 206 AKGLAFLHGAENPVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
+ + +LH + +RD K N+L S + KL+DFG AK S+ +TT
Sbjct: 125 GEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYT 180
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
Y Y APE + D++S GV++ LL G
Sbjct: 181 PY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 19/208 (9%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLV 157
LLGEG +G V + + L + +A + K G E+ L +LRH +++
Sbjct: 12 LLGEGSYGKVKEVLDSETLCR--RAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVI 69
Query: 158 RLIG--YCCEDEERLLVYEFMPRGS---LENHLFKRISVSLPWGTRLKIAIGAAKGLAFL 212
+L+ Y E ++ +V E+ G L++ KR V G ++ GL +L
Sbjct: 70 QLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLI----DGLEYL 125
Query: 213 HGAENPVIYRDFKTSNILLDSDFTAKLSDFGLAK-MGPEGSNTHVTTRVMGTYGYAAPEY 271
H ++++D K N+LL + T K+S G+A+ + P ++ T G+ + PE
Sbjct: 126 H--SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTS-QGSPAFQPPE- 181
Query: 272 ISTGHLT---TKSDVYSFGVVLLELLTG 296
I+ G T K D++S GV L + TG
Sbjct: 182 IANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 20/154 (12%)
Query: 154 PHLVRLI--------GYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGA 205
PH+VR++ G C L+V E + G L + + R + +I
Sbjct: 85 PHIVRIVDVYENLYAGRKC----LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 140
Query: 206 AKGLAFLHGAENPVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
+ + +LH + +RD K N+L S + KL+DFG AK S+ +TT
Sbjct: 141 GEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYT 196
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
Y Y APE + D++S GV++ LL G
Sbjct: 197 PY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 229
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 99/247 (40%), Gaps = 35/247 (14%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+G G FG +R + VAVK ++ G + E+I LRHP++VR
Sbjct: 27 IGSGNFGVARL------MRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSLRHPNIVR 79
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWG---TRLKIAIGAAKGLAFLHGA 215
+V E+ G LF+RI + + R G+++ H
Sbjct: 80 FKEVILTPTHLAIVMEYASGGE----LFERICNAGRFSEDEARFFFQ-QLISGVSYCHAM 134
Query: 216 ENPVIYRDFKTSNILLDSDFTA--KLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIS 273
+ V +RD K N LLD K+ FG +K S T +GT Y APE +
Sbjct: 135 Q--VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST---VGTPAYIAPEVLL 189
Query: 274 TGHLTTK-SDVYSFGVVLLELLTGRRSMDKLRPKSEQNL---------VDWAKP-YLRSS 322
K +DV+S GV L +L G + P+ +N V +A P Y+ S
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFED--PEEPKNFRKTIHRILNVQYAIPDYVHIS 247
Query: 323 RRLRYIV 329
R+++
Sbjct: 248 PECRHLI 254
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 67/154 (43%), Gaps = 20/154 (12%)
Query: 154 PHLVRLI--------GYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGA 205
PH+VR++ G C L+V E + G L + + R + +I
Sbjct: 70 PHIVRIVDVYENLYAGRKC----LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 125
Query: 206 AKGLAFLHGAENPVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
+ + +LH + +RD K N+L S + KL+DFG AK S+ +TT
Sbjct: 126 GEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYT 181
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
Y Y APE + D++S GV++ LL G
Sbjct: 182 PY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 214
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 20/154 (12%)
Query: 154 PHLVRLI--------GYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGA 205
PH+VR++ G C L+V E + G L + + R + +I
Sbjct: 69 PHIVRIVDVYENLYAGRKC----LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSI 124
Query: 206 AKGLAFLHGAENPVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
+ + +LH + +RD K N+L S + KL+DFG AK E ++ + T
Sbjct: 125 GEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTEPCY 179
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
T Y APE + D++S GV++ LL G
Sbjct: 180 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 99/247 (40%), Gaps = 35/247 (14%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
+G G FG +R + VAVK ++ G + E+I LRHP++VR
Sbjct: 27 IGSGNFGVARL------MRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSLRHPNIVR 79
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWG---TRLKIAIGAAKGLAFLHGA 215
+V E+ G LF+RI + + R G+++ H
Sbjct: 80 FKEVILTPTHLAIVMEYASGGE----LFERICNAGRFSEDEARFFFQ-QLISGVSYCHAM 134
Query: 216 ENPVIYRDFKTSNILLDSDFTA--KLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYIS 273
+ V +RD K N LLD K+ FG +K S T +GT Y APE +
Sbjct: 135 Q--VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDT---VGTPAYIAPEVLL 189
Query: 274 TGHLTTK-SDVYSFGVVLLELLTGRRSMDKLRPKSEQNL---------VDWAKP-YLRSS 322
K +DV+S GV L +L G + P+ +N V +A P Y+ S
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFED--PEEPKNFRKTIHRILNVQYAIPDYVHIS 247
Query: 323 RRLRYIV 329
R+++
Sbjct: 248 PECRHLI 254
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 41/216 (18%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLV 157
++G+G FG V K Y D + Q VA+K++ E + HR+ E+ L LR
Sbjct: 104 VIGKGSFGQVVKAY-DHKVHQ-----HVALKMVRNEK-RFHRQAAEEIRILEHLRKQ--- 153
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHL---FKRISVSLP--------WGTRL----KIA 202
+ + + V + + NH+ F+ +S++L G L K A
Sbjct: 154 -------DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFA 206
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTA--KLSDFGLAKMGPEGSNTHVTTRV 260
+ L LH +N +I+ D K NILL + K+ DFG + + T + +R
Sbjct: 207 HSILQCLDALH--KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF 264
Query: 261 MGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
Y APE I D++S G +L ELLTG
Sbjct: 265 -----YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 93/216 (43%), Gaps = 41/216 (18%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLV 157
++G+G FG V K Y D + Q VA+K++ E + HR+ E+ L LR
Sbjct: 104 VIGKGSFGQVVKAY-DHKVHQ-----HVALKMVRNEK-RFHRQAAEEIRILEHLRKQ--- 153
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHL---FKRISVSLP--------WGTRL----KIA 202
+ + + V + + NH+ F+ +S++L G L K A
Sbjct: 154 -------DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFA 206
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTA--KLSDFGLAKMGPEGSNTHVTTRV 260
+ L LH +N +I+ D K NILL + K+ DFG + + T + +R
Sbjct: 207 HSILQCLDALH--KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF 264
Query: 261 MGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
Y APE I D++S G +L ELLTG
Sbjct: 265 -----YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 89 ITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLD--IEGLQGHREWLAEVI 146
I Q ++ +G G +G V +++G + + A K+ +E + ++ E+
Sbjct: 7 INQYYTLENTIGRGSWGEVKIA-----VQKGTRIRRAAKKIPKYFVEDVDRFKQ---EIE 58
Query: 147 FLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSL-ENHLFKRISVSLPWGTRLKIAIGA 205
+ L HP+++RL ++ + LV E G L E + KR+ +K + A
Sbjct: 59 IMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSA 118
Query: 206 AKGLAFLHGAENPVIYRDFKTSNILL--DS-DFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
+A+ H V +RD K N L DS D KL DFGLA G + T+V G
Sbjct: 119 ---VAYCHKLN--VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK--MMRTKV-G 170
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
T Y +P+ + G + D +S GV++ LL G
Sbjct: 171 TPYYVSPQVLE-GLYGPECDEWSAGVMMYVLLCG 203
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 23/204 (11%)
Query: 99 LGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLVR 158
LG G FG VH+ ++ ++ A+ V VK D ++ E+ L RH +++
Sbjct: 13 LGRGEFGIVHRC-VETSSKKTYMAKFVKVKGTDQVLVK------KEISILNIARHRNILH 65
Query: 159 LIGYCCEDEERLLVYEFMPRGSLENHLFKRISVS---LPWGTRLKIAIGAAKGLAFLHGA 215
L EE ++++EF+ L+ +F+RI+ S L + + L FLH
Sbjct: 66 LHESFESMEELVMIFEFI--SGLD--IFERINTSAFELNEREIVSYVHQVCEALQFLHS- 120
Query: 216 ENPVIYRDFKTSNILLDS--DFTAKLSDFGLAKMGPEGSNTHVTTRVMGTY-GYAAPEYI 272
+ + + D + NI+ + T K+ +FG A+ G N R++ T Y APE
Sbjct: 121 -HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF----RLLFTAPEYYAPEVH 175
Query: 273 STGHLTTKSDVYSFGVVLLELLTG 296
++T +D++S G ++ LL+G
Sbjct: 176 QHDVVSTATDMWSLGTLVYVLLSG 199
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 65/154 (42%), Gaps = 20/154 (12%)
Query: 154 PHLVRLI--------GYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKIAIGA 205
PH+VR++ G C L+V E + G L + + R + +I
Sbjct: 115 PHIVRIVDVYENLYAGRKC----LLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSI 170
Query: 206 AKGLAFLHGAENPVIYRDFKTSNILLDS---DFTAKLSDFGLAKMGPEGSNTHVTTRVMG 262
+ + +LH + +RD K N+L S + KL+DFG AK S+ +TT
Sbjct: 171 GEAIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET--TSHNSLTTPCYT 226
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
Y Y APE + D +S GV+ LL G
Sbjct: 227 PY-YVAPEVLGPEKYDKSCDXWSLGVIXYILLCG 259
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 72/182 (39%), Gaps = 38/182 (20%)
Query: 200 KIAIGAAKGLAFLHGAENPVIYRDFKTSNIL-LDSDFTA------------------KLS 240
K+A K + FLH N + + D K NIL + SD+T K+
Sbjct: 122 KMAYQICKSVNFLHS--NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVV 179
Query: 241 DFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSM 300
DFG A E +T V+TR Y APE I + DV+S G +L+E G
Sbjct: 180 DFGSATYDDEHHSTLVSTR-----HYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234
Query: 301 DKLRPKSEQNLVD-----WAKPYLRSSRRLRYIVDPRL-------AGQYSVKGAKEMAVL 348
K +++ K ++ +R+ +Y RL AG+Y + K +
Sbjct: 235 PTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEF 294
Query: 349 AL 350
L
Sbjct: 295 ML 296
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 15/176 (8%)
Query: 126 AVKLLDIEGLQGHREWLAEV-IFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENH 184
AVK++D + R+ E+ I L +HP+++ L + + LV E M G L +
Sbjct: 56 AVKVID----KSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDK 111
Query: 185 LFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDF----TAKLS 240
+ ++ S + + IG K + +LH V++RD K SNIL + ++
Sbjct: 112 ILRQKFFSEREASFVLHTIG--KTVEYLHS--QGVVHRDLKPSNILYVDESGNPECLRIC 167
Query: 241 DFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
DFG AK N + T T + APE + D++S G++L +L G
Sbjct: 168 DFGFAKQ-LRAENGLLMTPCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 69/154 (44%), Gaps = 24/154 (15%)
Query: 157 VRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLP------WGTRLKIAIGAAKGL 209
+ + Y +DE L LV ++ G L L + LP + + +AI + L
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLT-LLSKFEDKLPEDMARFYIGEMVLAIDSIHQL 210
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFG-LAKMGPEGSNTHVTTRVMGTYGYAA 268
++H RD K N+LLD + +L+DFG KM +G T ++ +GT Y +
Sbjct: 211 HYVH--------RDIKPDNVLLDVNGHIRLADFGSCLKMNDDG--TVQSSVAVGTPDYIS 260
Query: 269 PEYIST-----GHLTTKSDVYSFGVVLLELLTGR 297
PE + G + D +S GV + E+L G
Sbjct: 261 PEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 294
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 69/154 (44%), Gaps = 24/154 (15%)
Query: 157 VRLIGYCCEDEERL-LVYEFMPRGSLENHLFKRISVSLP------WGTRLKIAIGAAKGL 209
+ + Y +DE L LV ++ G L L + LP + + +AI + L
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLT-LLSKFEDKLPEDMARFYIGEMVLAIDSIHQL 194
Query: 210 AFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFG-LAKMGPEGSNTHVTTRVMGTYGYAA 268
++H RD K N+LLD + +L+DFG KM +G T ++ +GT Y +
Sbjct: 195 HYVH--------RDIKPDNVLLDVNGHIRLADFGSCLKMNDDG--TVQSSVAVGTPDYIS 244
Query: 269 PEYIST-----GHLTTKSDVYSFGVVLLELLTGR 297
PE + G + D +S GV + E+L G
Sbjct: 245 PEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGE 278
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 15/176 (8%)
Query: 126 AVKLLDIEGLQGHREWLAEV-IFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENH 184
AVK++D + R+ E+ I L +HP+++ L + + LV E M G L +
Sbjct: 56 AVKVID----KSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDK 111
Query: 185 LFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDF----TAKLS 240
+ ++ S + + IG K + +LH V++RD K SNIL + ++
Sbjct: 112 ILRQKFFSEREASFVLHTIG--KTVEYLHS--QGVVHRDLKPSNILYVDESGNPECLRIC 167
Query: 241 DFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
DFG AK N + T T + APE + D++S G++L +L G
Sbjct: 168 DFGFAKQ-LRAENGLLMTPCY-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 15/176 (8%)
Query: 126 AVKLLDIEGLQGHREWLAEV-IFLGQLRHPHLVRLIGYCCEDEERLLVYEFMPRGSLENH 184
AVK++D + R+ E+ I L +HP+++ L + + +V E G L +
Sbjct: 51 AVKIID----KSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDK 106
Query: 185 LFKRISVSLPWGTRLKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDF----TAKLS 240
+ ++ S + + I K + +LH V++RD K SNIL + + ++
Sbjct: 107 ILRQKFFSEREASAVLFTI--TKTVEYLHA--QGVVHRDLKPSNILYVDESGNPESIRIC 162
Query: 241 DFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
DFG AK N + T T + APE + D++S GV+L LTG
Sbjct: 163 DFGFAKQ-LRAENGLLXTPCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 13/219 (5%)
Query: 83 LSELRAITQNFSSNYLLGEGGFGTVHKGY-IDDDLRQGLKAQAVAVKLLDIEGLQGHREW 141
+ E + + LLG GGFG+V+ G + D+L +K ++ D L
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK-HVEKDRISDWGELPNGTRV 59
Query: 142 LAEVIFLGQLR--HPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRL 199
EV+ L ++ ++RL+ + + +L+ E R LF I+ L
Sbjct: 60 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEEL 116
Query: 200 KIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDF-TAKLSDFGLAKMGPEGSNTHVTT 258
+ A H V++RD K NIL+D + KL DFG + V T
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYT 172
Query: 259 RVMGTYGYAAPEYISTGHLTTKS-DVYSFGVVLLELLTG 296
GT Y+ PE+I +S V+S G++L +++ G
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 13/219 (5%)
Query: 83 LSELRAITQNFSSNYLLGEGGFGTVHKGY-IDDDLRQGLKAQAVAVKLLDIEGLQGHREW 141
+ E + + LLG GGFG+V+ G + D+L +K ++ D L
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK-HVEKDRISDWGELPNGTRV 59
Query: 142 LAEVIFLGQLR--HPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRL 199
EV+ L ++ ++RL+ + + +L+ E R LF I+ L
Sbjct: 60 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEEL 116
Query: 200 KIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDF-TAKLSDFGLAKMGPEGSNTHVTT 258
+ A H V++RD K NIL+D + KL DFG + V T
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYT 172
Query: 259 RVMGTYGYAAPEYISTGHLTTKS-DVYSFGVVLLELLTG 296
GT Y+ PE+I +S V+S G++L +++ G
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
Query: 219 VIYRDFKTSNILLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYI-STGHL 277
+I+RD K NI++ DFT KL DFG A G + GT Y APE + +
Sbjct: 151 IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT---FCGTIEYCAPEVLMGNPYR 207
Query: 278 TTKSDVYSFGVVLLELLTGRRSMDKLRPKSEQNLVDWAKPYLRSSRRLRYI 328
+ +++S GV L L+ +L E + PYL S + +
Sbjct: 208 GPELEMWSLGVTLYTLVFEENPFCELEETVEAAI---HPPYLVSKELMSLV 255
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 13/219 (5%)
Query: 83 LSELRAITQNFSSNYLLGEGGFGTVHKGY-IDDDLRQGLKAQAVAVKLLDIEGLQGHREW 141
+ E + + LLG GGFG+V+ G + D+L +K ++ D L
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK-HVEKDRISDWGELPNGTRV 59
Query: 142 LAEVIFLGQLR--HPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRL 199
EV+ L ++ ++RL+ + + +L+ E R LF I+ L
Sbjct: 60 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEEL 116
Query: 200 KIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDF-TAKLSDFGLAKMGPEGSNTHVTT 258
+ A H V++RD K NIL+D + KL DFG + V T
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYT 172
Query: 259 RVMGTYGYAAPEYISTGHLTTKS-DVYSFGVVLLELLTG 296
GT Y+ PE+I +S V+S G++L +++ G
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 90/211 (42%), Gaps = 23/211 (10%)
Query: 89 ITQNFSSNYLLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFL 148
Q+F LG G +G V K +D R AV + G + LAEV
Sbjct: 55 FQQSFQRLSRLGHGSYGEVFKVRSKEDGR----LYAVKRSMSPFRGPKDRARKLAEVGSH 110
Query: 149 GQL-RHPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLP----WGTRLKIAI 203
++ +HP VRL E+ L + + SL+ H + SLP WG L+ +
Sbjct: 111 EKVGQHPCCVRLE-QAWEEGGILYLQTELCGPSLQQHC-EAWGASLPEAQVWGY-LRDTL 167
Query: 204 GAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTAKLSDFG-LAKMGPEGSNTHVTTRVMG 262
LA H +++ D K +NI L KL DFG L ++G G+ G
Sbjct: 168 -----LALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE----G 218
Query: 263 TYGYAAPEYISTGHLTTKSDVYSFGVVLLEL 293
Y APE + G T +DV+S G+ +LE+
Sbjct: 219 DPRYMAPELLQ-GSYGTAADVFSLGLTILEV 248
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 13/217 (5%)
Query: 85 ELRAITQNFSSNYLLGEGGFGTVHKGY-IDDDLRQGLKAQAVAVKLLDIEGLQGHREWLA 143
E + + LLG GGFG+V+ G + D+L +K ++ D L
Sbjct: 17 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK-HVEKDRISDWGELPNGTRVPM 75
Query: 144 EVIFLGQLR--HPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKI 201
EV+ L ++ ++RL+ + + +L+ E R LF I+ L
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 132
Query: 202 AIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDF-TAKLSDFGLAKMGPEGSNTHVTTRV 260
+ A H V++RD K NIL+D + KL DFG + V T
Sbjct: 133 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDF 188
Query: 261 MGTYGYAAPEYISTGHLTTKS-DVYSFGVVLLELLTG 296
GT Y+ PE+I +S V+S G++L +++ G
Sbjct: 189 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 92/220 (41%), Gaps = 13/220 (5%)
Query: 82 QLSELRAITQNFSSNYLLGEGGFGTVHKGY-IDDDLRQGLKAQAVAVKLLDIEGLQGHRE 140
+ E + + LLG GGFG+V+ G + D+L +K ++ D L
Sbjct: 22 HMKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK-HVEKDRISDWGELPNGTR 80
Query: 141 WLAEVIFLGQLR--HPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTR 198
EV+ L ++ ++RL+ + + +L+ E R LF I+
Sbjct: 81 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEE 137
Query: 199 LKIAIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDF-TAKLSDFGLAKMGPEGSNTHVT 257
L + A H V++RD K NIL+D + KL DFG + V
Sbjct: 138 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVY 193
Query: 258 TRVMGTYGYAAPEYISTGHLTTKS-DVYSFGVVLLELLTG 296
T GT Y+ PE+I +S V+S G++L +++ G
Sbjct: 194 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 233
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 13/217 (5%)
Query: 85 ELRAITQNFSSNYLLGEGGFGTVHKGY-IDDDLRQGLKAQAVAVKLLDIEGLQGHREWLA 143
E + + LLG GGFG+V+ G + D+L +K ++ D L
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK-HVEKDRISDWGELPNGTRVPM 76
Query: 144 EVIFLGQLR--HPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKI 201
EV+ L ++ ++RL+ + + +L+ E R LF I+ L
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 133
Query: 202 AIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDF-TAKLSDFGLAKMGPEGSNTHVTTRV 260
+ A H V++RD K NIL+D + KL DFG + V T
Sbjct: 134 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDF 189
Query: 261 MGTYGYAAPEYISTGHLTTKS-DVYSFGVVLLELLTG 296
GT Y+ PE+I +S V+S G++L +++ G
Sbjct: 190 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 13/217 (5%)
Query: 85 ELRAITQNFSSNYLLGEGGFGTVHKGY-IDDDLRQGLKAQAVAVKLLDIEGLQGHREWLA 143
E + + LLG GGFG+V+ G + D+L +K ++ D L
Sbjct: 17 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK-HVEKDRISDWGELPNGTRVPM 75
Query: 144 EVIFLGQLR--HPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKI 201
EV+ L ++ ++RL+ + + +L+ E R LF I+ L
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 132
Query: 202 AIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDF-TAKLSDFGLAKMGPEGSNTHVTTRV 260
+ A H V++RD K NIL+D + KL DFG + V T
Sbjct: 133 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDF 188
Query: 261 MGTYGYAAPEYISTGHLTTKS-DVYSFGVVLLELLTG 296
GT Y+ PE+I +S V+S G++L +++ G
Sbjct: 189 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 13/217 (5%)
Query: 85 ELRAITQNFSSNYLLGEGGFGTVHKGY-IDDDLRQGLKAQAVAVKLLDIEGLQGHREWLA 143
E + + LLG GGFG+V+ G + D+L +K ++ D L
Sbjct: 37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIK-HVEKDRISDWGELPNGTRVPM 95
Query: 144 EVIFLGQLR--HPHLVRLIGYCCEDEERLLVYEFMPRGSLENHLFKRISVSLPWGTRLKI 201
EV+ L ++ ++RL+ + + +L+ E R LF I+ L
Sbjct: 96 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILE---RPEPVQDLFDFITERGALQEELAR 152
Query: 202 AIGAAKGLAFLHGAENPVIYRDFKTSNILLDSDF-TAKLSDFGLAKMGPEGSNTHVTTRV 260
+ A H V++RD K NIL+D + KL DFG + V T
Sbjct: 153 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGAL----LKDTVYTDF 208
Query: 261 MGTYGYAAPEYISTGHLTTKS-DVYSFGVVLLELLTG 296
GT Y+ PE+I +S V+S G++L +++ G
Sbjct: 209 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 245
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 92/216 (42%), Gaps = 41/216 (18%)
Query: 98 LLGEGGFGTVHKGYIDDDLRQGLKAQAVAVKLLDIEGLQGHREWLAEVIFLGQLRHPHLV 157
++G+G FG V K Y D + Q VA+K++ E + HR+ E+ L LR
Sbjct: 104 VIGKGXFGQVVKAY-DHKVHQ-----HVALKMVRNEK-RFHRQAAEEIRILEHLRKQ--- 153
Query: 158 RLIGYCCEDEERLLVYEFMPRGSLENHL---FKRISVSLP--------WGTRL----KIA 202
+ + + V + + NH+ F+ +S++L G L K A
Sbjct: 154 -------DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFA 206
Query: 203 IGAAKGLAFLHGAENPVIYRDFKTSNILLDSDFTA--KLSDFGLAKMGPEGSNTHVTTRV 260
+ L LH +N +I+ D K NILL + K+ DFG + + + +R
Sbjct: 207 HSILQCLDALH--KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRF 264
Query: 261 MGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTG 296
Y APE I D++S G +L ELLTG
Sbjct: 265 -----YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,708,422
Number of Sequences: 62578
Number of extensions: 462538
Number of successful extensions: 3594
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 876
Number of HSP's successfully gapped in prelim test: 178
Number of HSP's that attempted gapping in prelim test: 1014
Number of HSP's gapped (non-prelim): 1131
length of query: 419
length of database: 14,973,337
effective HSP length: 101
effective length of query: 318
effective length of database: 8,652,959
effective search space: 2751640962
effective search space used: 2751640962
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)