BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014741
(419 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910 OS=Arabidopsis thaliana
GN=At1g04910 PE=1 SV=1
Length = 519
Score = 195 bits (495), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 133/423 (31%), Positives = 218/423 (51%), Gaps = 55/423 (13%)
Query: 1 MNQQRVAICNAVVLARLLNATLVVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVK 60
+NQQR AICNAV+ AR++NATLV+P+ +S W D S F IY EHFI L D+++V
Sbjct: 100 LNQQRSAICNAVLAARIMNATLVLPELDANSFWHDDSGFQGIYDVEHFIETLKYDVKIVG 159
Query: 61 ELPNKLQSLDLEAIGSVVTDVDIPKESKPSFYLKNIIPILLRNGVVHLLGFGNRLAFDPI 120
++P+ ++ + I + + P+++ +YL + + + ++L F +RLA +
Sbjct: 160 KIPDVHKNGKTKKIKAF--QIRPPRDAPIEWYLTTALKAMREHSAIYLTPFSHRLAEEID 217
Query: 121 PFQLQRLRCRCNFHALQFAPKIQETGALLLRRLRKHEGHSGPLDHYLVGPYADSIMKEKR 180
+ QRLRCR N+HAL+F P I + ++ +LR +GH
Sbjct: 218 NPEYQRLRCRVNYHALRFKPHIMKLSESIVDKLRS-QGH--------------------- 255
Query: 181 GQSAKASRYLAIHLRFEIDMVAHSLCEFGGGEEERQELEKYREIHFPALAHLKKTTKLPS 240
+++IHLRFE+DM+A + C EE++ L KYR+ +F K
Sbjct: 256 --------FMSIHLRFEMDMLAFAGCFDIFNPEEQKILRKYRKENF--------ADKRLI 299
Query: 241 PAEIRSEGLCPLTPEEAVLMLAALGFNRKTHVFVAGAQIYGGTRRLGALNSLYPYLVTKE 300
E R+ G CPLTPEE L+L A+ F+ T +++A +++GG + + +L+P L +
Sbjct: 300 YNERRAIGKCPLTPEEVGLILRAMRFDNSTRIYLAAGELFGGEQFMKPFRTLFPRL---D 356
Query: 301 NLLSATELEPFKNFSSQL--AALDFIGCTAANAFAMT-DSGSQLSSLVSGYRIYYGGGKM 357
N S E S L +A+D++ C ++ F T D S ++ + G+R+YYG
Sbjct: 357 NHSSVDPSEELSATSQGLIGSAVDYMVCLLSDIFMPTYDGPSNFANNLLGHRLYYGFRT- 415
Query: 358 PTIRPNKRRLAAIFVKNSTIEWKVFEQRVRKAVRQTK----HIQSRSKGRSVYRYPRCKE 413
TIRP+++ LA IF+ + FE+ VR+ + +T H + + +P E
Sbjct: 416 -TIRPDRKALAPIFIAREKGKRAGFEEAVRRVMLKTNFGGPHKRVSPESFYTNSWP---E 471
Query: 414 CMC 416
C C
Sbjct: 472 CFC 474
>sp|Q54KU3|PKS25_DICDI Probable polyketide synthase 25 OS=Dictyostelium discoideum
GN=pks25 PE=3 SV=1
Length = 2380
Score = 40.0 bits (92), Expect = 0.038, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 23 VVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKELPNKLQSLDLEAIGSVVTDVD 82
V+P F S+V ++ S I+ E+F + ++ + + + N + ++ IGS + ++
Sbjct: 784 VIPTF--STVTSNLFNESTIFDSEYFFDNISKPVSFTQTISNLYKHIEDNQIGSNIVFIE 841
Query: 83 IPKESKPSFYLKNIIPI---LLRNG 104
I SFYLK +IP RNG
Sbjct: 842 IAPHPTLSFYLKQMIPKQSQYFRNG 866
>sp|Q54KU5|PKS24_DICDI Probable polyketide synthase 24 OS=Dictyostelium discoideum
GN=pks24 PE=3 SV=1
Length = 2471
Score = 40.0 bits (92), Expect = 0.038, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 23 VVPKFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKELPNKLQSLDLEAIGSVVTDVD 82
V+P F S+V ++ S I+ E+F + ++ + + + N + ++ IGS + ++
Sbjct: 789 VIPTF--STVTSNLFNESTIFDSEYFFDNISKPVSFTQTISNLYKHIEDNQIGSNIVFIE 846
Query: 83 IPKESKPSFYLKNIIPI---LLRNG 104
I SFYLK +IP RNG
Sbjct: 847 IAPHPTLSFYLKQMIPKQSQYFRNG 871
>sp|A1CQH8|UTP25_ASPCL U3 small nucleolar RNA-associated protein 25 OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=utp25 PE=3 SV=1
Length = 693
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 6/122 (4%)
Query: 304 SATELEPFKNFSSQLAALDFIGCTAANAFAMTDSGSQLSSLVSGYRIYYGGGKMPTIRPN 363
A+ L P KNFSS G A AM+D QL+ + GY+ G + +
Sbjct: 181 DASLLPPLKNFSSVKLKKKLDGPAADLIPAMSDDAQQLAPYIFGYQDVLHGARNTSNSAT 240
Query: 364 KRRLAAIFVKNSTIEW--KVFEQRVRKAVRQTKHIQSRSKG----RSVYRYPRCKECMCP 417
R L AI N ++ +V + R A Q + R +G + +Y P + C+
Sbjct: 241 LRDLLAIHATNHVLKTRDRVLKNNARVAKEQDADLDLRDQGFTRPKVLYLLPTRQACVRV 300
Query: 418 TD 419
D
Sbjct: 301 VD 302
>sp|Q53005|4HBCL_RHOPA 4-hydroxybenzoate--CoA/benzoate--CoA ligase OS=Rhodopseudomonas
palustris (strain ATCC BAA-98 / CGA009) GN=hbaA PE=1
SV=1
Length = 539
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 74 IGSVVTDVDIPKESKPSFYLKNII--PIL----LRNGVVHLLGFGNRLAFDPIPFQLQRL 127
+G ++ + + +E++ + LK+ + PIL +R G+V +L RL D + L+
Sbjct: 46 VGPMLARLGVEQENRIALVLKDTVDFPILFWGAIRAGIVPVL-LNTRLTADQYRYLLEDS 104
Query: 128 RCRCNFHALQFAPKIQETGALL 149
R R F + +F P I+E A L
Sbjct: 105 RSRVVFASSEFLPVIEEAAADL 126
>sp|Q6CQX4|NTF2_KLULA Nuclear transport factor 2 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=NTF2 PE=3 SV=1
Length = 125
Score = 33.1 bits (74), Expect = 4.7, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 31/57 (54%)
Query: 26 KFMYSSVWRDVSQFSDIYQEEHFINYLTPDIRMVKELPNKLQSLDLEAIGSVVTDVD 82
+F Y+ D +Q ++Y+E+ + + T ++ K++ KL SL + + +T +D
Sbjct: 14 EFYYNQFDSDRTQLGNLYREQSMLTFETTQLQGAKDIVEKLVSLPFQKVAHRITTLD 70
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 151,376,002
Number of Sequences: 539616
Number of extensions: 6263843
Number of successful extensions: 13528
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 13517
Number of HSP's gapped (non-prelim): 16
length of query: 419
length of database: 191,569,459
effective HSP length: 120
effective length of query: 299
effective length of database: 126,815,539
effective search space: 37917846161
effective search space used: 37917846161
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)