Query 014742
Match_columns 419
No_of_seqs 131 out of 1382
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 08:04:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014742.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014742hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1256 Long-chain acyl-CoA sy 100.0 6.7E-54 1.5E-58 419.0 42.2 395 23-419 53-455 (691)
2 PLN02861 long-chain-fatty-acid 100.0 6.8E-53 1.5E-57 436.3 48.4 418 1-419 1-419 (660)
3 PLN02614 long-chain acyl-CoA s 100.0 2.3E-50 5E-55 417.3 48.3 415 4-419 6-422 (666)
4 PLN02430 long-chain-fatty-acid 100.0 1E-49 2.3E-54 412.0 48.2 415 5-419 4-419 (660)
5 PLN02736 long-chain acyl-CoA s 100.0 8.6E-50 1.9E-54 413.5 45.8 401 5-419 8-412 (651)
6 PTZ00342 acyl-CoA synthetase; 100.0 4.5E-49 9.7E-54 407.9 44.6 387 18-419 38-497 (746)
7 KOG1180 Acyl-CoA synthetase [L 100.0 6.1E-48 1.3E-52 361.7 35.0 393 19-419 16-438 (678)
8 COG1022 FAA1 Long-chain acyl-C 100.0 1.1E-47 2.4E-52 380.5 37.9 366 41-419 14-388 (613)
9 PLN02387 long-chain-fatty-acid 100.0 6.7E-47 1.4E-51 393.4 43.8 390 25-419 40-456 (696)
10 PTZ00216 acyl-CoA synthetase; 100.0 3.6E-45 7.7E-50 381.2 44.0 401 3-419 30-463 (700)
11 KOG1177 Long chain fatty acid 100.0 2E-42 4.2E-47 319.8 28.2 323 31-419 38-387 (596)
12 COG0365 Acs Acyl-coenzyme A sy 100.0 1.8E-42 3.9E-47 339.0 29.7 304 48-419 14-326 (528)
13 PTZ00297 pantothenate kinase; 100.0 5E-41 1.1E-45 361.5 39.3 363 34-419 419-789 (1452)
14 COG0318 CaiC Acyl-CoA syntheta 100.0 2.6E-41 5.6E-46 341.6 34.1 312 40-419 8-328 (534)
15 PLN02860 o-succinylbenzoate-Co 100.0 8.6E-40 1.9E-44 333.7 33.7 317 42-419 6-325 (563)
16 PLN02654 acetate-CoA ligase 100.0 1.1E-39 2.3E-44 338.2 33.3 326 43-419 88-436 (666)
17 PRK07788 acyl-CoA synthetase; 100.0 1.2E-39 2.6E-44 331.8 31.8 310 43-419 49-359 (549)
18 KOG1176 Acyl-CoA synthetase [L 100.0 5.7E-40 1.2E-44 323.0 28.2 287 76-419 44-336 (537)
19 TIGR02316 propion_prpE propion 100.0 8.3E-40 1.8E-44 337.7 30.6 323 42-419 51-390 (628)
20 PRK08180 feruloyl-CoA synthase 100.0 8.4E-39 1.8E-43 329.4 37.6 318 40-419 36-376 (614)
21 PRK13295 cyclohexanecarboxylat 100.0 5.2E-39 1.1E-43 327.0 34.0 311 42-419 23-348 (547)
22 PTZ00237 acetyl-CoA synthetase 100.0 1.7E-39 3.6E-44 335.8 30.8 332 40-419 56-416 (647)
23 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 3E-39 6.5E-44 333.7 31.9 322 42-419 56-397 (625)
24 PRK07529 AMP-binding domain pr 100.0 7.7E-39 1.7E-43 330.5 33.7 326 40-419 22-369 (632)
25 PRK12582 acyl-CoA synthetase; 100.0 2.4E-38 5.3E-43 326.6 37.0 319 40-419 46-388 (624)
26 PRK06334 long chain fatty acid 100.0 4.9E-39 1.1E-43 326.2 30.5 305 42-419 18-336 (539)
27 PLN02246 4-coumarate--CoA liga 100.0 3.6E-38 7.9E-43 320.1 35.4 329 20-419 4-335 (537)
28 PLN03052 acetate--CoA ligase; 100.0 2.9E-38 6.2E-43 329.0 33.2 316 42-419 173-508 (728)
29 PRK00174 acetyl-CoA synthetase 100.0 4E-38 8.7E-43 326.0 33.8 319 45-419 69-406 (637)
30 PRK08314 long-chain-fatty-acid 100.0 3.5E-38 7.7E-43 320.9 32.9 318 40-419 7-341 (546)
31 PRK10524 prpE propionyl-CoA sy 100.0 3.1E-38 6.6E-43 326.4 31.5 323 42-419 52-391 (629)
32 PRK07656 long-chain-fatty-acid 100.0 8.6E-38 1.9E-42 315.6 33.9 314 40-419 2-318 (513)
33 KOG1179 Very long-chain acyl-C 100.0 2.9E-38 6.2E-43 298.0 27.9 312 40-419 74-392 (649)
34 PRK13382 acyl-CoA synthetase; 100.0 8.6E-38 1.9E-42 317.2 32.9 306 42-419 42-348 (537)
35 PRK05620 long-chain-fatty-acid 100.0 1.3E-37 2.8E-42 318.6 34.2 326 39-419 6-334 (576)
36 PRK04319 acetyl-CoA synthetase 100.0 7.2E-38 1.6E-42 320.1 31.7 314 42-419 42-359 (570)
37 PRK06187 long-chain-fatty-acid 100.0 1.8E-37 3.9E-42 313.7 33.0 314 40-419 3-317 (521)
38 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 3.5E-37 7.6E-42 313.0 35.3 312 42-419 21-346 (538)
39 TIGR03098 ligase_PEP_1 acyl-Co 100.0 2.9E-37 6.3E-42 311.9 33.0 309 44-419 1-311 (515)
40 PLN02574 4-coumarate--CoA liga 100.0 3.3E-37 7.1E-42 314.5 33.1 332 22-419 21-356 (560)
41 PLN02330 4-coumarate--CoA liga 100.0 4.7E-37 1E-41 312.6 34.0 325 21-419 10-340 (546)
42 PRK07008 long-chain-fatty-acid 100.0 4.8E-37 1E-41 312.0 33.2 318 41-419 8-329 (539)
43 PRK03640 O-succinylbenzoic aci 100.0 5.2E-37 1.1E-41 307.6 32.8 287 42-419 1-289 (483)
44 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 4.6E-37 1E-41 311.3 32.5 307 42-419 22-335 (527)
45 PRK06087 short chain acyl-CoA 100.0 1.1E-36 2.4E-41 309.9 33.6 309 42-419 22-337 (547)
46 PRK06155 crotonobetaine/carnit 100.0 1.2E-36 2.6E-41 309.1 33.6 312 38-419 16-328 (542)
47 PRK05605 long-chain-fatty-acid 100.0 1.3E-36 2.7E-41 311.2 33.7 319 41-419 30-372 (573)
48 PRK05857 acyl-CoA synthetase; 100.0 2.5E-37 5.4E-42 314.0 28.1 315 36-419 7-321 (540)
49 PRK08316 acyl-CoA synthetase; 100.0 1.3E-36 2.9E-41 307.6 33.2 312 41-419 9-323 (523)
50 PRK08043 bifunctional acyl-[ac 100.0 2.5E-37 5.5E-42 323.7 28.7 305 41-419 202-515 (718)
51 PLN03102 acyl-activating enzym 100.0 8.7E-37 1.9E-41 312.3 31.9 312 43-419 14-335 (579)
52 PRK06018 putative acyl-CoA syn 100.0 1E-36 2.2E-41 309.8 31.8 319 40-419 7-329 (542)
53 PRK08279 long-chain-acyl-CoA s 100.0 7.7E-37 1.7E-41 314.4 31.1 310 38-419 32-349 (600)
54 PRK07786 long-chain-fatty-acid 100.0 1.2E-36 2.6E-41 309.3 32.0 309 40-419 14-327 (542)
55 PF00501 AMP-binding: AMP-bind 100.0 1.4E-37 3.1E-42 305.9 24.3 302 49-419 1-314 (417)
56 PRK05852 acyl-CoA synthetase; 100.0 1.5E-36 3.3E-41 308.0 32.4 315 40-419 13-331 (534)
57 PRK03584 acetoacetyl-CoA synth 100.0 1.2E-36 2.6E-41 315.9 31.8 319 42-419 85-421 (655)
58 PRK08008 caiC putative crotono 100.0 3E-36 6.5E-41 304.7 33.9 315 42-419 6-323 (517)
59 PRK09274 peptide synthase; Pro 100.0 7E-37 1.5E-41 311.8 28.8 305 42-419 5-326 (552)
60 PRK06839 acyl-CoA synthetase; 100.0 2.8E-36 6E-41 303.4 31.7 295 43-419 2-299 (496)
61 PRK07470 acyl-CoA synthetase; 100.0 3E-36 6.5E-41 305.5 31.9 309 40-419 4-316 (528)
62 PRK07638 acyl-CoA synthetase; 100.0 3.9E-36 8.5E-41 301.6 32.1 288 43-419 1-290 (487)
63 TIGR03205 pimA dicarboxylate-- 100.0 7E-36 1.5E-40 303.7 34.3 334 24-419 6-348 (541)
64 PRK07514 malonyl-CoA synthase; 100.0 5.7E-36 1.2E-40 301.7 32.9 302 42-419 2-305 (504)
65 PRK05677 long-chain-fatty-acid 100.0 7.5E-36 1.6E-40 304.7 34.0 319 42-419 23-362 (562)
66 PRK06060 acyl-CoA synthetase; 100.0 1.6E-36 3.5E-41 317.3 29.2 285 43-419 4-297 (705)
67 PRK12583 acyl-CoA synthetase; 100.0 7.9E-36 1.7E-40 304.5 33.4 313 40-419 15-354 (558)
68 COG1021 EntE Peptide arylation 100.0 1.8E-37 3.9E-42 280.9 18.3 309 41-419 26-341 (542)
69 TIGR01217 ac_ac_CoA_syn acetoa 100.0 5E-36 1.1E-40 310.3 31.8 319 42-419 86-422 (652)
70 PRK08315 AMP-binding domain pr 100.0 1.1E-35 2.5E-40 303.3 33.7 313 40-419 13-352 (559)
71 PRK06188 acyl-CoA synthetase; 100.0 7.7E-36 1.7E-40 302.2 31.8 306 41-419 10-317 (524)
72 PRK06145 acyl-CoA synthetase; 100.0 1.7E-35 3.8E-40 297.7 33.1 298 42-419 1-301 (497)
73 PRK10946 entE enterobactin syn 100.0 1.2E-35 2.5E-40 301.7 32.0 306 42-419 24-336 (536)
74 TIGR02262 benz_CoA_lig benzoat 100.0 1.9E-35 4E-40 298.3 32.9 306 43-419 4-314 (508)
75 PRK07769 long-chain-fatty-acid 100.0 1.4E-35 3.1E-40 306.6 32.1 313 40-419 18-348 (631)
76 PLN02479 acetate-CoA ligase 100.0 1.5E-35 3.2E-40 302.8 31.1 318 43-419 20-345 (567)
77 PRK08633 2-acyl-glycerophospho 100.0 1E-35 2.3E-40 327.6 31.3 316 37-419 609-934 (1146)
78 PRK07798 acyl-CoA synthetase; 100.0 6.1E-35 1.3E-39 296.1 34.1 316 43-419 3-333 (533)
79 PRK10252 entF enterobactin syn 100.0 1.4E-35 3E-40 330.0 31.8 294 41-419 456-753 (1296)
80 PRK12476 putative fatty-acid-- 100.0 2.3E-35 5E-40 303.9 30.9 307 41-419 32-359 (612)
81 PRK07059 Long-chain-fatty-acid 100.0 8.8E-35 1.9E-39 296.6 34.6 324 40-419 20-363 (557)
82 PRK13388 acyl-CoA synthetase; 100.0 3.1E-35 6.7E-40 298.6 31.1 294 43-419 3-299 (540)
83 PRK12492 long-chain-fatty-acid 100.0 4.7E-35 1E-39 298.9 31.7 322 42-419 23-369 (562)
84 PRK12467 peptide synthase; Pro 100.0 1.2E-35 2.6E-40 353.7 30.7 291 42-419 3094-3388(3956)
85 PRK13383 acyl-CoA synthetase; 100.0 6.5E-35 1.4E-39 294.9 31.4 293 41-419 33-328 (516)
86 TIGR03443 alpha_am_amid L-amin 100.0 1.9E-35 4.2E-40 330.4 29.9 315 42-419 235-566 (1389)
87 PRK06164 acyl-CoA synthetase; 100.0 4.3E-35 9.4E-40 297.8 29.7 313 40-419 7-330 (540)
88 TIGR01734 D-ala-DACP-lig D-ala 100.0 4.1E-35 9E-40 295.3 29.0 290 44-419 1-295 (502)
89 PRK08751 putative long-chain f 100.0 2.9E-34 6.3E-39 293.0 34.3 321 42-419 24-365 (560)
90 PRK06710 long-chain-fatty-acid 100.0 1.1E-34 2.4E-39 296.2 31.1 319 41-419 22-359 (563)
91 PRK07867 acyl-CoA synthetase; 100.0 3E-34 6.5E-39 290.6 32.4 294 42-419 4-301 (529)
92 PRK06814 acylglycerophosphoeth 100.0 1.1E-34 2.3E-39 319.0 31.2 310 41-419 629-943 (1140)
93 PRK09088 acyl-CoA synthetase; 100.0 1.4E-34 3.1E-39 290.4 29.1 280 50-419 2-287 (488)
94 PRK05851 long-chain-fatty-acid 100.0 5E-35 1.1E-39 296.2 25.6 292 45-419 4-314 (525)
95 PRK06178 acyl-CoA synthetase; 100.0 4.6E-34 9.9E-39 292.0 32.5 324 36-419 26-364 (567)
96 PRK04813 D-alanine--poly(phosp 100.0 3.3E-34 7.1E-39 288.8 30.6 288 43-419 2-297 (503)
97 PRK09192 acyl-CoA synthetase; 100.0 1.5E-34 3.2E-39 296.2 28.1 311 33-419 11-341 (579)
98 PRK08162 acyl-CoA synthetase; 100.0 7.4E-34 1.6E-38 289.1 32.8 313 42-419 17-331 (545)
99 PRK12467 peptide synthase; Pro 100.0 1.9E-34 4.1E-39 343.6 31.5 294 41-419 510-808 (3956)
100 PRK12316 peptide synthase; Pro 100.0 1.6E-34 3.5E-39 349.2 31.0 293 42-419 510-807 (5163)
101 PRK12316 peptide synthase; Pro 100.0 2.3E-34 5E-39 347.9 31.9 293 42-419 2002-2298(5163)
102 PRK05691 peptide synthase; Val 100.0 2.4E-34 5.3E-39 345.3 31.5 295 42-419 3719-4020(4334)
103 PRK08974 long-chain-fatty-acid 100.0 1.9E-33 4.1E-38 287.0 32.9 320 42-419 22-361 (560)
104 PRK13391 acyl-CoA synthetase; 100.0 2E-33 4.3E-38 283.8 31.3 302 50-419 4-311 (511)
105 PRK05850 acyl-CoA synthetase; 100.0 9.7E-34 2.1E-38 290.2 28.7 308 44-419 2-330 (578)
106 PRK05691 peptide synthase; Val 100.0 6.1E-34 1.3E-38 341.9 31.4 292 41-419 1129-1425(4334)
107 PRK09029 O-succinylbenzoic aci 100.0 1.6E-33 3.5E-38 280.6 28.3 273 43-419 2-275 (458)
108 PRK13390 acyl-CoA synthetase; 100.0 4E-33 8.6E-38 280.9 30.2 295 51-419 5-306 (501)
109 PRK07787 acyl-CoA synthetase; 100.0 6.6E-33 1.4E-37 277.1 28.3 267 52-419 9-277 (471)
110 PRK08308 acyl-CoA synthetase; 100.0 1.2E-32 2.6E-37 270.7 27.9 239 76-419 7-247 (414)
111 PRK08276 long-chain-fatty-acid 100.0 8.7E-33 1.9E-37 278.5 27.5 286 76-419 10-298 (502)
112 PRK07868 acyl-CoA synthetase; 100.0 1.8E-32 3.8E-37 294.6 30.1 306 40-419 444-755 (994)
113 PRK07768 long-chain-fatty-acid 100.0 2.3E-32 4.9E-37 278.2 29.4 297 43-419 2-318 (545)
114 TIGR01733 AA-adenyl-dom amino 100.0 2.4E-32 5.3E-37 267.8 28.6 264 79-419 1-271 (408)
115 PRK07445 O-succinylbenzoic aci 100.0 1E-32 2.2E-37 273.7 25.6 244 78-419 20-265 (452)
116 TIGR01923 menE O-succinylbenzo 100.0 3.1E-32 6.7E-37 269.5 27.6 253 79-419 1-254 (436)
117 PRK12406 long-chain-fatty-acid 100.0 1.3E-31 2.8E-36 270.5 29.2 289 76-419 10-307 (509)
118 KOG1175 Acyl-CoA synthetase [L 100.0 1.9E-31 4.1E-36 262.2 27.1 317 40-419 60-396 (626)
119 PLN03051 acyl-activating enzym 100.0 4.9E-30 1.1E-34 258.1 23.2 257 109-419 1-274 (499)
120 TIGR03089 conserved hypothetic 100.0 1E-26 2.2E-31 208.3 21.5 222 49-314 2-227 (227)
121 COG1020 EntF Non-ribosomal pep 99.9 4.1E-24 9E-29 221.8 29.1 292 42-419 226-523 (642)
122 TIGR02372 4_coum_CoA_lig 4-cou 99.8 3.1E-19 6.6E-24 172.5 14.9 155 198-419 82-241 (386)
123 PRK07824 O-succinylbenzoic aci 99.8 1.2E-17 2.5E-22 161.1 16.1 150 216-419 31-186 (358)
124 KOG3628 Predicted AMP-binding 99.7 1.4E-16 3E-21 160.9 20.0 271 43-332 770-1056(1363)
125 TIGR02155 PA_CoA_ligase phenyl 99.7 1.9E-16 4E-21 156.1 15.7 157 218-419 73-231 (422)
126 TIGR03335 F390_ftsA coenzyme F 99.6 5.4E-15 1.2E-19 146.2 16.2 157 217-419 83-240 (445)
127 KOG1178 Non-ribosomal peptide 99.4 8.1E-13 1.7E-17 137.6 13.0 307 42-407 35-351 (1032)
128 COG1541 PaaK Coenzyme F390 syn 99.4 1E-11 2.2E-16 118.2 14.3 159 216-419 86-246 (438)
129 TIGR02304 aden_form_hyp probab 98.9 3.6E-08 7.7E-13 96.2 15.7 142 223-419 102-248 (430)
130 KOG3628 Predicted AMP-binding 98.9 4.5E-08 9.8E-13 100.4 15.4 251 41-319 92-368 (1363)
131 PF04443 LuxE: Acyl-protein sy 97.8 0.00047 1E-08 66.0 13.5 160 218-419 87-268 (365)
132 COG1541 PaaK Coenzyme F390 syn 95.4 0.063 1.4E-06 52.1 8.0 106 77-183 109-221 (438)
133 PF03321 GH3: GH3 auxin-respon 92.9 0.11 2.5E-06 52.6 4.2 31 217-247 77-108 (528)
134 TIGR03335 F390_ftsA coenzyme F 89.4 3.2 6.8E-05 41.3 10.4 104 77-183 105-215 (445)
135 TIGR02155 PA_CoA_ligase phenyl 88.6 3.3 7.2E-05 40.7 10.0 114 69-183 84-206 (422)
136 TIGR03089 conserved hypothetic 80.4 11 0.00024 33.6 8.5 54 95-150 171-226 (227)
137 PF00501 AMP-binding: AMP-bind 78.0 22 0.00048 34.5 10.6 90 218-318 8-99 (417)
138 PRK07656 long-chain-fatty-acid 75.2 24 0.00051 35.4 10.3 122 56-183 164-292 (513)
139 TIGR01923 menE O-succinylbenzo 75.1 30 0.00065 33.8 10.8 117 57-182 110-229 (436)
140 PRK06187 long-chain-fatty-acid 74.0 32 0.00069 34.4 10.9 120 58-183 167-292 (521)
141 PLN03102 acyl-activating enzym 72.0 44 0.00096 34.4 11.5 86 239-327 39-126 (579)
142 PLN03052 acetate--CoA ligase; 71.6 53 0.0012 35.0 12.1 101 218-322 188-290 (728)
143 COG0031 CysK Cysteine synthase 71.4 48 0.001 30.9 10.1 61 96-157 55-116 (300)
144 PTZ00237 acetyl-CoA synthetase 71.1 57 0.0012 34.2 12.1 96 219-320 75-172 (647)
145 PRK09274 peptide synthase; Pro 70.2 42 0.00091 34.1 10.8 99 219-320 20-121 (552)
146 KOG1177 Long chain fatty acid 69.5 30 0.00066 34.3 8.6 123 56-184 232-362 (596)
147 PRK03584 acetoacetyl-CoA synth 68.9 61 0.0013 33.9 11.9 97 219-322 98-196 (655)
148 PRK04319 acetyl-CoA synthetase 68.7 74 0.0016 32.5 12.3 122 57-183 204-334 (570)
149 PRK03640 O-succinylbenzoic aci 68.6 72 0.0016 31.6 11.9 121 57-183 140-265 (483)
150 PLN02736 long-chain acyl-CoA s 68.6 84 0.0018 32.9 12.8 88 238-328 77-166 (651)
151 PRK08316 acyl-CoA synthetase; 68.3 71 0.0015 32.0 11.9 88 238-328 35-124 (523)
152 TIGR02188 Ac_CoA_lig_AcsA acet 68.2 58 0.0012 33.8 11.5 99 218-322 70-170 (625)
153 PRK00174 acetyl-CoA synthetase 67.8 68 0.0015 33.4 11.9 99 218-322 80-180 (637)
154 KOG1176 Acyl-CoA synthetase [L 67.7 74 0.0016 32.5 11.5 92 237-329 43-136 (537)
155 TIGR01733 AA-adenyl-dom amino 67.6 55 0.0012 31.5 10.6 123 56-183 118-245 (408)
156 PLN02654 acetate-CoA ligase 67.1 65 0.0014 33.9 11.6 100 218-323 102-203 (666)
157 TIGR03590 PseG pseudaminic aci 67.0 47 0.001 30.6 9.4 90 85-183 18-112 (279)
158 PRK07788 acyl-CoA synthetase; 66.2 41 0.00089 34.2 9.7 85 239-326 74-160 (549)
159 TIGR03098 ligase_PEP_1 acyl-Co 64.3 83 0.0018 31.4 11.5 86 239-327 25-112 (515)
160 PRK05857 acyl-CoA synthetase; 64.0 62 0.0013 32.9 10.5 96 218-323 27-124 (540)
161 PRK13295 cyclohexanecarboxylat 63.8 73 0.0016 32.3 11.1 99 218-322 37-137 (547)
162 PRK13388 acyl-CoA synthetase; 63.8 78 0.0017 32.2 11.2 85 239-326 26-113 (540)
163 PRK07529 AMP-binding domain pr 63.3 59 0.0013 33.9 10.4 99 218-321 38-138 (632)
164 PLN03051 acyl-activating enzym 63.2 69 0.0015 32.1 10.6 122 57-183 118-247 (499)
165 PRK07798 acyl-CoA synthetase; 62.3 1E+02 0.0022 30.9 11.8 88 238-328 27-116 (533)
166 TIGR02316 propion_prpE propion 61.5 1.1E+02 0.0024 31.8 12.0 98 218-321 65-164 (628)
167 TIGR01217 ac_ac_CoA_syn acetoa 61.4 98 0.0021 32.4 11.6 96 220-322 99-196 (652)
168 PLN02565 cysteine synthase 61.4 84 0.0018 29.7 10.1 72 87-158 50-122 (322)
169 PRK08008 caiC putative crotono 61.0 1.1E+02 0.0025 30.6 11.8 103 218-327 20-124 (517)
170 PRK06334 long chain fatty acid 60.7 85 0.0018 31.9 10.8 123 56-183 181-310 (539)
171 PRK08279 long-chain-acyl-CoA s 59.9 93 0.002 32.1 11.1 98 218-327 50-149 (600)
172 PRK06155 crotonobetaine/carnit 59.8 70 0.0015 32.5 10.0 86 239-327 46-133 (542)
173 PRK07470 acyl-CoA synthetase; 59.8 97 0.0021 31.2 11.1 86 238-326 31-118 (528)
174 PRK08315 AMP-binding domain pr 59.1 58 0.0013 33.1 9.4 102 57-163 198-303 (559)
175 PRK12583 acyl-CoA synthetase; 58.8 64 0.0014 32.8 9.6 122 57-183 200-328 (558)
176 PF06543 Lac_bphage_repr: Lact 58.6 7.4 0.00016 24.8 1.6 26 386-411 22-47 (49)
177 PRK13391 acyl-CoA synthetase; 58.1 1.2E+02 0.0027 30.3 11.5 99 218-326 10-110 (511)
178 PLN02574 4-coumarate--CoA liga 57.5 95 0.0021 31.7 10.6 100 218-326 52-153 (560)
179 PRK08276 long-chain-fatty-acid 57.5 97 0.0021 30.9 10.6 87 238-327 10-98 (502)
180 PRK06839 acyl-CoA synthetase; 57.3 1.3E+02 0.0028 29.8 11.5 99 218-327 15-115 (496)
181 COG0399 WecE Predicted pyridox 57.1 62 0.0013 31.3 8.4 66 87-156 59-129 (374)
182 PLN02330 4-coumarate--CoA liga 57.1 89 0.0019 31.7 10.3 86 238-326 54-141 (546)
183 PLN02246 4-coumarate--CoA liga 56.7 73 0.0016 32.2 9.6 87 238-327 49-137 (537)
184 PRK13383 acyl-CoA synthetase; 56.4 76 0.0016 31.9 9.6 86 239-327 60-147 (516)
185 PF01041 DegT_DnrJ_EryC1: DegT 56.2 44 0.00096 32.1 7.5 65 88-156 51-120 (363)
186 PRK09088 acyl-CoA synthetase; 56.0 1.4E+02 0.003 29.7 11.3 95 218-322 8-104 (488)
187 PRK07514 malonyl-CoA synthase; 55.7 97 0.0021 30.9 10.2 88 237-327 26-115 (504)
188 TIGR02379 ECA_wecE TDP-4-keto- 55.4 61 0.0013 31.3 8.3 59 94-156 63-126 (376)
189 KOG1179 Very long-chain acyl-C 54.7 55 0.0012 33.2 7.6 74 78-155 262-337 (649)
190 PRK07059 Long-chain-fatty-acid 54.3 1.2E+02 0.0027 30.7 10.9 85 238-325 47-133 (557)
191 PRK10524 prpE propionyl-CoA sy 54.0 1.9E+02 0.004 30.1 12.2 98 218-321 66-165 (629)
192 COG0318 CaiC Acyl-CoA syntheta 54.0 1.9E+02 0.0041 29.4 12.0 94 218-321 24-119 (534)
193 TIGR03208 cyc_hxne_CoA_lg cycl 53.6 1.2E+02 0.0027 30.6 10.7 98 219-322 36-135 (538)
194 KOG0023 Alcohol dehydrogenase, 53.5 1.1E+02 0.0024 28.8 8.9 72 93-167 173-244 (360)
195 PLN02479 acetate-CoA ligase 53.2 1.7E+02 0.0038 29.8 11.7 85 239-326 45-131 (567)
196 COG2236 Predicted phosphoribos 52.9 28 0.00062 30.1 4.8 33 76-108 5-37 (192)
197 PRK06087 short chain acyl-CoA 52.9 1.2E+02 0.0025 30.8 10.3 80 238-320 48-129 (547)
198 PRK11761 cysM cysteine synthas 52.4 1.3E+02 0.0028 28.0 9.6 77 78-157 40-117 (296)
199 PLN02614 long-chain acyl-CoA s 51.9 2.6E+02 0.0057 29.3 13.0 87 238-327 78-166 (666)
200 PRK11706 TDP-4-oxo-6-deoxy-D-g 51.9 72 0.0016 30.8 8.2 58 95-156 64-126 (375)
201 PRK07638 acyl-CoA synthetase; 51.7 1.5E+02 0.0032 29.5 10.7 94 69-166 152-248 (487)
202 PLN02249 indole-3-acetic acid- 51.6 8.4 0.00018 39.7 1.7 30 217-246 97-127 (597)
203 PRK10696 tRNA 2-thiocytidine b 51.3 1.7E+02 0.0038 26.5 10.2 72 86-157 12-95 (258)
204 PRK05677 long-chain-fatty-acid 51.3 1.7E+02 0.0037 29.8 11.3 87 238-326 48-136 (562)
205 PRK05850 acyl-CoA synthetase; 50.9 1.8E+02 0.004 29.7 11.5 105 218-328 14-125 (578)
206 cd02069 methionine_synthase_B1 50.5 1.7E+02 0.0038 25.7 9.6 83 277-402 101-186 (213)
207 PRK05620 long-chain-fatty-acid 50.2 2.8E+02 0.006 28.3 12.7 103 218-328 23-127 (576)
208 PRK08162 acyl-CoA synthetase; 49.8 1.2E+02 0.0025 30.8 9.8 86 239-327 43-130 (545)
209 PRK05852 acyl-CoA synthetase; 49.7 2.9E+02 0.0062 27.9 12.6 111 69-182 185-305 (534)
210 PRK05605 long-chain-fatty-acid 49.6 1.1E+02 0.0023 31.4 9.5 85 239-326 57-143 (573)
211 TIGR03443 alpha_am_amid L-amin 49.4 1.2E+02 0.0027 35.0 10.8 100 218-320 249-350 (1389)
212 cd01445 TST_Repeats Thiosulfat 49.2 53 0.0011 26.6 5.8 41 88-128 81-124 (138)
213 PLN03013 cysteine synthase 49.1 1.5E+02 0.0033 29.2 9.8 72 87-158 158-230 (429)
214 PLN02556 cysteine synthase/L-3 48.9 1.4E+02 0.0031 28.7 9.6 62 96-157 103-165 (368)
215 PLN02861 long-chain-fatty-acid 48.3 1.6E+02 0.0035 30.9 10.7 88 238-328 76-165 (660)
216 PRK08314 long-chain-fatty-acid 48.2 1E+02 0.0023 31.1 9.1 88 239-328 35-124 (546)
217 TIGR01139 cysK cysteine syntha 48.0 1.8E+02 0.0039 27.0 9.9 67 92-159 46-113 (298)
218 TIGR01101 V_ATP_synt_F vacuola 47.9 1.1E+02 0.0024 24.0 7.0 78 100-182 3-93 (115)
219 PRK07008 long-chain-fatty-acid 47.8 1.6E+02 0.0035 29.8 10.4 123 56-182 174-303 (539)
220 PRK06018 putative acyl-CoA syn 47.1 2.5E+02 0.0054 28.4 11.7 87 238-327 38-126 (542)
221 COG1064 AdhP Zn-dependent alco 46.8 80 0.0017 30.0 7.2 61 93-157 158-218 (339)
222 PRK06188 acyl-CoA synthetase; 46.5 1.4E+02 0.0031 30.0 9.8 102 77-182 187-291 (524)
223 PLN02860 o-succinylbenzoate-Co 46.2 1.1E+02 0.0024 31.3 8.9 81 239-322 32-114 (563)
224 PLN02247 indole-3-acetic acid- 46.1 23 0.00049 36.5 3.8 30 219-248 88-118 (606)
225 PRK13390 acyl-CoA synthetase; 45.1 2.9E+02 0.0064 27.4 11.8 82 238-322 23-106 (501)
226 PRK12406 long-chain-fatty-acid 44.4 1.6E+02 0.0036 29.4 9.8 87 239-328 11-99 (509)
227 TIGR02370 pyl_corrinoid methyl 44.4 2.1E+02 0.0046 24.7 11.1 90 264-403 82-185 (197)
228 PRK07867 acyl-CoA synthetase; 44.3 1.5E+02 0.0033 30.0 9.6 85 239-325 28-114 (529)
229 COG0365 Acs Acyl-coenzyme A sy 43.7 2.2E+02 0.0048 29.1 10.2 101 219-326 24-126 (528)
230 PRK12492 long-chain-fatty-acid 43.4 1.6E+02 0.0035 29.9 9.7 87 238-326 48-136 (562)
231 TIGR01136 cysKM cysteine synth 43.1 2.3E+02 0.005 26.3 9.9 67 91-158 46-113 (299)
232 PLN02387 long-chain-fatty-acid 42.2 2E+02 0.0044 30.4 10.4 88 238-328 105-194 (696)
233 PRK13382 acyl-CoA synthetase; 42.1 1.8E+02 0.004 29.4 9.8 85 239-326 68-154 (537)
234 PRK06178 acyl-CoA synthetase; 41.9 1.8E+02 0.004 29.6 9.8 87 239-328 58-146 (567)
235 COG0399 WecE Predicted pyridox 41.9 2.7E+02 0.0058 27.0 10.0 33 262-298 70-102 (374)
236 PLN00011 cysteine synthase 41.3 2.6E+02 0.0056 26.3 10.0 70 88-158 53-124 (323)
237 TIGR02262 benz_CoA_lig benzoat 41.0 2.3E+02 0.005 28.3 10.2 85 239-327 30-117 (508)
238 PRK12582 acyl-CoA synthetase; 40.4 1.4E+02 0.003 31.1 8.7 80 238-320 79-165 (624)
239 PRK08633 2-acyl-glycerophospho 39.9 2.6E+02 0.0056 31.5 11.3 122 56-182 780-908 (1146)
240 PRK04813 D-alanine--poly(phosp 39.4 1.4E+02 0.003 29.7 8.3 80 239-321 27-108 (503)
241 PRK08308 acyl-CoA synthetase; 39.1 3.6E+02 0.0079 26.0 11.2 119 56-181 99-221 (414)
242 TIGR01734 D-ala-DACP-lig D-ala 38.7 1.6E+02 0.0035 29.2 8.7 81 239-322 25-107 (502)
243 PRK06164 acyl-CoA synthetase; 38.7 1.6E+02 0.0034 29.8 8.7 105 56-166 179-286 (540)
244 PRK10595 SOS cell division inh 38.5 1.5E+02 0.0032 24.9 6.8 66 91-156 70-141 (164)
245 cd06448 L-Ser-dehyd Serine deh 38.5 2.6E+02 0.0055 26.3 9.4 64 94-158 43-106 (316)
246 PRK07786 long-chain-fatty-acid 38.4 2E+02 0.0043 29.2 9.4 85 239-326 42-128 (542)
247 TIGR03588 PseC UDP-4-keto-6-de 38.0 1.9E+02 0.0042 27.8 8.8 66 88-156 55-128 (380)
248 PRK11658 UDP-4-amino-4-deoxy-L 37.9 1.6E+02 0.0035 28.4 8.2 61 90-154 61-126 (379)
249 TIGR00936 ahcY adenosylhomocys 37.9 3.1E+02 0.0068 26.9 10.0 66 98-163 28-95 (406)
250 TIGR01138 cysM cysteine syntha 37.4 3.4E+02 0.0073 25.1 9.9 66 92-158 48-114 (290)
251 PRK12476 putative fatty-acid-- 37.1 4.9E+02 0.011 26.9 12.8 103 219-327 48-157 (612)
252 PRK06060 acyl-CoA synthetase; 36.8 2.1E+02 0.0045 30.2 9.5 83 239-324 30-114 (705)
253 PLN02430 long-chain-fatty-acid 36.7 5.2E+02 0.011 27.1 12.9 85 238-325 75-161 (660)
254 PRK06710 long-chain-fatty-acid 36.2 1.9E+02 0.004 29.5 8.8 84 239-325 49-134 (563)
255 PRK15407 lipopolysaccharide bi 35.9 1.6E+02 0.0035 29.2 7.9 55 98-156 107-166 (438)
256 TIGR03595 Obg_CgtA_exten Obg f 35.5 44 0.00096 23.5 2.8 19 90-108 45-63 (69)
257 PRK08751 putative long-chain f 35.4 2.6E+02 0.0057 28.3 9.7 86 239-326 50-137 (560)
258 cd01449 TST_Repeat_2 Thiosulfa 35.2 97 0.0021 23.8 5.2 41 88-128 64-104 (118)
259 PF09269 DUF1967: Domain of un 35.2 38 0.00083 23.8 2.5 20 88-107 43-62 (69)
260 PRK02261 methylaspartate mutas 34.9 2.2E+02 0.0048 23.0 7.3 58 99-156 1-61 (137)
261 PRK10946 entE enterobactin syn 34.8 3.1E+02 0.0067 27.7 10.1 103 57-165 181-288 (536)
262 PRK08043 bifunctional acyl-[ac 34.3 3.3E+02 0.0071 28.9 10.5 122 56-182 363-489 (718)
263 PRK09029 O-succinylbenzoic aci 34.2 2.4E+02 0.0052 27.7 9.0 82 238-322 27-110 (458)
264 TIGR01137 cysta_beta cystathio 33.8 3.3E+02 0.0072 27.0 9.9 67 91-158 50-117 (454)
265 PRK09192 acyl-CoA synthetase; 33.8 3.2E+02 0.0069 28.0 10.1 88 237-327 47-143 (579)
266 PTZ00342 acyl-CoA synthetase; 33.3 3.1E+02 0.0067 29.4 10.0 106 219-329 75-194 (746)
267 PRK10717 cysteine synthase A; 33.2 3.8E+02 0.0082 25.3 9.7 64 94-158 55-119 (330)
268 TIGR02275 DHB_AMP_lig 2,3-dihy 33.1 2.3E+02 0.0049 28.5 8.8 79 239-321 48-129 (527)
269 KOG0025 Zn2+-binding dehydroge 33.0 1.9E+02 0.0042 26.9 7.0 66 98-163 157-223 (354)
270 TIGR03205 pimA dicarboxylate-- 32.7 2.4E+02 0.0052 28.5 8.9 79 239-320 46-126 (541)
271 cd01561 CBS_like CBS_like: Thi 32.6 4E+02 0.0086 24.5 9.9 66 93-159 43-109 (291)
272 PRK00865 glutamate racemase; P 31.9 2.4E+02 0.0051 25.7 7.8 57 48-110 20-76 (261)
273 PTZ00216 acyl-CoA synthetase; 31.7 3.9E+02 0.0084 28.3 10.5 89 236-328 118-209 (700)
274 TIGR00067 glut_race glutamate 31.7 1.7E+02 0.0037 26.5 6.7 60 48-114 13-73 (251)
275 cd01519 RHOD_HSP67B2 Member of 31.6 1.3E+02 0.0029 22.4 5.3 53 76-128 36-92 (106)
276 PRK10252 entF enterobactin syn 31.6 3.6E+02 0.0077 30.9 10.8 123 56-183 596-728 (1296)
277 COG5012 Predicted cobalamin bi 31.1 3.8E+02 0.0082 23.8 8.7 52 277-328 117-171 (227)
278 PRK06814 acylglycerophosphoeth 30.9 7.7E+02 0.017 27.8 13.2 122 56-182 791-917 (1140)
279 cd02070 corrinoid_protein_B12- 30.9 3.5E+02 0.0076 23.4 9.3 58 268-325 85-146 (201)
280 PRK07769 long-chain-fatty-acid 30.9 6.2E+02 0.013 26.2 12.6 103 219-327 35-144 (631)
281 PLN02620 indole-3-acetic acid- 30.8 39 0.00085 34.9 2.6 30 218-247 99-129 (612)
282 COG1167 ARO8 Transcriptional r 30.7 94 0.002 31.0 5.4 82 262-353 175-261 (459)
283 PRK06702 O-acetylhomoserine am 30.5 2.7E+02 0.0059 27.6 8.4 52 106-157 79-133 (432)
284 PRK08974 long-chain-fatty-acid 30.2 2.7E+02 0.0059 28.2 8.9 86 239-326 48-135 (560)
285 PLN02356 phosphateglycerate ki 30.2 4.1E+02 0.0088 26.3 9.4 69 88-157 89-158 (423)
286 KOG0633 Histidinol phosphate a 30.1 39 0.00085 30.6 2.2 73 88-160 96-171 (375)
287 cd00640 Trp-synth-beta_II Tryp 29.2 4.1E+02 0.0088 23.6 10.0 67 91-158 39-105 (244)
288 cd01019 ZnuA Zinc binding prot 29.0 2.5E+02 0.0055 25.9 7.6 91 80-170 156-249 (286)
289 PRK08180 feruloyl-CoA synthase 29.0 3.1E+02 0.0068 28.3 9.1 95 219-320 53-154 (614)
290 cd02067 B12-binding B12 bindin 28.2 1.9E+02 0.0042 22.3 5.8 39 120-158 21-59 (119)
291 PRK14807 histidinol-phosphate 28.1 5.2E+02 0.011 24.4 10.6 55 99-156 97-155 (351)
292 PRK07868 acyl-CoA synthetase; 27.7 4.3E+02 0.0093 29.4 10.3 69 96-165 640-710 (994)
293 COG1022 FAA1 Long-chain acyl-C 27.3 3.1E+02 0.0068 28.6 8.4 106 54-165 187-295 (613)
294 TIGR01501 MthylAspMutase methy 27.2 3.4E+02 0.0073 22.0 9.5 46 277-322 14-62 (134)
295 PLN02723 3-mercaptopyruvate su 27.0 1.3E+02 0.0028 28.4 5.3 52 77-128 238-295 (320)
296 PRK11493 sseA 3-mercaptopyruva 26.7 1.3E+02 0.0028 27.7 5.2 52 77-128 201-257 (281)
297 cd07050 BMC_EutL_repeat2 ethan 26.7 1.3E+02 0.0028 21.8 3.8 39 92-130 4-43 (87)
298 PRK07476 eutB threonine dehydr 26.5 4.1E+02 0.0089 24.9 8.7 49 110-158 74-122 (322)
299 TIGR01279 DPOR_bchN light-inde 26.3 5.3E+02 0.012 25.2 9.6 67 100-167 272-339 (407)
300 cd00615 Orn_deC_like Ornithine 26.1 3E+02 0.0066 25.3 7.6 55 99-156 96-161 (294)
301 CHL00073 chlN photochlorophyll 25.7 6.7E+02 0.015 25.1 10.1 67 101-168 313-388 (457)
302 PRK09162 hypoxanthine-guanine 25.5 2E+02 0.0043 24.5 5.7 50 76-127 15-64 (181)
303 cd02070 corrinoid_protein_B12- 25.3 4.5E+02 0.0097 22.7 9.7 81 77-157 50-141 (201)
304 PRK05939 hypothetical protein; 24.5 3.6E+02 0.0077 26.3 8.0 19 145-163 106-124 (397)
305 TIGR02080 O_succ_thio_ly O-suc 24.3 4.3E+02 0.0093 25.6 8.5 16 236-251 207-223 (382)
306 PRK02842 light-independent pro 24.2 6.2E+02 0.014 24.9 9.8 66 101-167 289-356 (427)
307 cd01979 Pchlide_reductase_N Pc 24.1 5.9E+02 0.013 24.8 9.5 66 101-167 275-341 (396)
308 PRK06381 threonine synthase; V 23.8 3.1E+02 0.0068 25.6 7.4 65 91-159 55-119 (319)
309 PRK06145 acyl-CoA synthetase; 23.7 4.8E+02 0.01 25.8 9.1 82 239-323 27-110 (497)
310 TIGR00623 sula cell division i 23.6 2.8E+02 0.0062 23.4 6.0 52 91-142 74-128 (168)
311 PRK07787 acyl-CoA synthetase; 23.5 4.3E+02 0.0094 26.0 8.7 73 239-320 25-100 (471)
312 PF02729 OTCace_N: Aspartate/o 23.5 4.1E+02 0.0088 21.6 9.7 97 82-181 16-124 (142)
313 TIGR01862 N2-ase-Ialpha nitrog 23.2 7.4E+02 0.016 24.6 10.3 63 101-163 316-379 (443)
314 COG4009 Uncharacterized protei 22.4 3.1E+02 0.0067 19.8 5.6 65 77-152 9-76 (88)
315 PRK09331 Sep-tRNA:Cys-tRNA syn 22.3 4.6E+02 0.01 25.2 8.4 56 99-157 99-166 (387)
316 PLN02550 threonine dehydratase 22.1 9.1E+02 0.02 25.1 11.5 58 98-158 155-212 (591)
317 COG0436 Aspartate/tyrosine/aro 22.0 2.7E+02 0.0058 27.2 6.6 27 300-326 251-277 (393)
318 PF00156 Pribosyltran: Phospho 21.7 2.6E+02 0.0057 21.5 5.5 52 76-130 3-54 (125)
319 PF11285 DUF3086: Protein of u 21.7 2.4E+02 0.0053 25.5 5.5 73 312-394 126-198 (283)
320 cd01563 Thr-synth_1 Threonine 21.7 6.7E+02 0.014 23.4 9.4 57 102-159 70-126 (324)
321 TIGR02304 aden_form_hyp probab 21.6 5.3E+02 0.012 25.5 8.6 86 97-185 138-225 (430)
322 PF07722 Peptidase_C26: Peptid 21.0 1.5E+02 0.0032 26.2 4.2 39 119-158 30-68 (217)
323 cd01448 TST_Repeat_1 Thiosulfa 20.7 2.9E+02 0.0062 21.3 5.5 40 89-128 66-106 (122)
324 PF07994 NAD_binding_5: Myo-in 20.5 7E+02 0.015 23.3 9.4 71 79-151 127-227 (295)
325 PRK14057 epimerase; Provisiona 20.2 6.6E+02 0.014 22.8 8.8 64 91-157 91-164 (254)
326 TIGR01284 alt_nitrog_alph nitr 20.1 8.1E+02 0.017 24.4 9.6 63 101-163 324-387 (457)
No 1
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=6.7e-54 Score=418.96 Aligned_cols=395 Identities=42% Similarity=0.714 Sum_probs=350.3
Q ss_pred CcceecCcc--CCCCCCCCCCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCC
Q 014742 23 GPVYRCIYA--KDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVN 100 (419)
Q Consensus 23 ~~~~~~~~~--~~~~~~~~~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~ 100 (419)
+..||+... ...++..+....|+++.|.+.+..+|+.+++.....++ ..++++++||.|+.+++..++..|+..|++
T Consensus 53 ~~~~~s~~~~~~~~~~~~~~~~~T~~~~f~~~~~~~~~~p~LG~r~~~~-~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~ 131 (691)
T KOG1256|consen 53 DGSRRSAVLPREELFSCPFDGPLTLYEGFRRSVEKSGNGPMLGTRVIVD-GKGPYEWLTYKQVYERAENLGSGLRKLGVK 131 (691)
T ss_pred CCceeeeeccCCCCCCCCCCCcccHHHHhhcchhccCCCCceeEEeccc-CCCCcEEEEHHHHHHHHHHHHHHHHHhCCC
Confidence 367888777 45666667889999999999999999999998763223 567889999999999999999999999999
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEe-CCChhhHhhcCcc-CCCCccEEE
Q 014742 101 PGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQ-ENKIPSILSCLPR-CCLYLKTIV 178 (419)
Q Consensus 101 ~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~-~~~~~~~~~~~~~-~~~~~~~~~ 178 (419)
+++.|+|+..|++||++..+||...|.+.|||..+++++.+.+++.+++..+||+| +...+.+++.... ..+.++.++
T Consensus 132 ~~~~VGIy~~N~pEWiis~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI 211 (691)
T KOG1256|consen 132 EDSKVGIYAFNRPEWIISEMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAII 211 (691)
T ss_pred CCceEEEeccCChhhHHhHHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEE
Confidence 99999999999999999999999999999999999999999999999999999999 4556666555543 367899999
Q ss_pred EecCCChhhHHHHHHhCceeeeHHHHHhcC-CCCCCC-CCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhh
Q 014742 179 SFANVSSSQKKEAEELGVSCFSWEEFLQLG-TLDCEL-PPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMF 256 (419)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~ 256 (419)
.++.........+...+..+.+|+++.+.+ ...... .+..+++.|.|+|||||||+||||++||+|+...+.......
T Consensus 212 ~~~~~~~~~~~~~~~~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~ 291 (691)
T KOG1256|consen 212 QLDEPSDELKEKAENNGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLS 291 (691)
T ss_pred EecCCchhhhhhhhcCCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhh
Confidence 999999888888888889999999999988 333333 477899999999999999999999999999999765432222
Q ss_pred hhcC-ccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCCCHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhh
Q 014742 257 VVTG-KVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKIS 335 (419)
Q Consensus 257 ~~~~-~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~ 335 (419)
.... .....+|+++|++||.|++..++-+..+..|+++.+.++|+..+.+.|++.+||.+.++|.+|++|.+.+++.+.
T Consensus 292 ~~~~~~~~~~~dv~lSyLPLAHi~er~~~~~~~~~G~~IgF~~gD~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~ 371 (691)
T KOG1256|consen 292 AAENAKATVGDDVYLSYLPLAHIFERVVELYTFYIGAKIGFARGDILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQ 371 (691)
T ss_pred hcccccccccCceEEEeCcHHHHHHHHHHHhHhhcccEEEEecCChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHh
Confidence 1111 123347999999999999999987777899999999999999999999999999999999999999999999999
Q ss_pred ccCchHHHHHHHHHHhhh-hhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeee
Q 014742 336 SGGALSKKLFEFAYNYKL-GNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQG 414 (419)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~ 414 (419)
+.+.+++.+|+||+.+|+ ..+..|..+. ..+.+|.++|+++++.+|+++|.+++|++|+++++.++++..+|++|+++
T Consensus 372 ~sgflkr~l~~~A~~~k~~~~~~~G~~~~-~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g~~v~eG 450 (691)
T KOG1256|consen 372 KSGFLKRKLFNFAMAYKLEHRLMKGKSRS-RDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALGCRVLEG 450 (691)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhCCCCcc-cchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcCceeeec
Confidence 999999999999999999 6788887665 78999999999999999999999999999999999999999999999999
Q ss_pred ccCCC
Q 014742 415 YGMVE 419 (419)
Q Consensus 415 YG~tE 419 (419)
||+||
T Consensus 451 YGlTE 455 (691)
T KOG1256|consen 451 YGLTE 455 (691)
T ss_pred ccccc
Confidence 99998
No 2
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=6.8e-53 Score=436.33 Aligned_cols=418 Identities=76% Similarity=1.280 Sum_probs=342.2
Q ss_pred CCCceeEEccCCCCCCCCCCCCCcceecCccCCCCCCCCCCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeH
Q 014742 1 MSETYTVKVEEARPAADGKPSGGPVYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTY 80 (419)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty 80 (419)
|-++||+.+++-+|.+...|.++++||++.....+...+....|+.++|.+.++.+|+++|+.+....+++.++++++||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty 80 (660)
T PLN02861 1 MAETYTVKVEESRPATGGKPSAGPVYRSIYAKDGLLDLPADIDSPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTY 80 (660)
T ss_pred CCccceeeeccCCCCCCCCCCCCCcccccccccccccCCCCCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEH
Confidence 56789999999999988999999999999877777666677889999999999999999999753111333456678999
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCCh
Q 014742 81 QEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI 160 (419)
Q Consensus 81 ~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 160 (419)
+|+.++++++|++|.++|+++||+|+++++|+++|+++++||+++|++++||++.++.+++.++++.++++++|++....
T Consensus 81 ~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~ 160 (660)
T PLN02861 81 KEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKI 160 (660)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987665
Q ss_pred hhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEe
Q 014742 161 PSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVL 240 (419)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~ 240 (419)
..+..........++.++.+++............+....+|+++..............++++++|+|||||||.||||++
T Consensus 161 ~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~i~yTSGTTG~PKGV~l 240 (660)
T PLN02861 161 SSILSCLPKCSSNLKTIVSFGDVSSEQKEEAEELGVSCFSWEEFSLMGSLDCELPPKQKTDICTIMYTSGTTGEPKGVIL 240 (660)
T ss_pred HHHHHhhhhCCCCCEEEEEECCCChhhhhhhhcCCcEEEEHHHHHHhCcccCCCCccCCCceEEEEecCCCCCCCCEEEE
Confidence 55443332222246677777643221111111112335678777654422222334568999999999999999999999
Q ss_pred echhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCCCHHHHHHHhhhhcCeEEEecc
Q 014742 241 TNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVP 320 (419)
Q Consensus 241 sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~~~~~~~~~i~~~~~t~l~~~P 320 (419)
||++++..+......+........++|++++.+|++|++++...+.+++.|+++++.+.++..+++.|++++||+++++|
T Consensus 241 th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~~~~~l~~G~~v~~~~~~~~~~~~~i~~~~~T~~~~vP 320 (660)
T PLN02861 241 TNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPLAHVYDQVIETYCISKGASIGFWQGDIRYLMEDVQALKPTIFCGVP 320 (660)
T ss_pred ecHHHHHHHHHHHhccccccccCCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEEeCCCHHHHHHHHHHhCCcEEeech
Confidence 99999988776554431111124678999999999999998876668999999999877999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHH
Q 014742 321 RVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVE 400 (419)
Q Consensus 321 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~ 400 (419)
.+|+.|++.+...+.+.+.+++.+|++|+++++..++.|.......+..+.++++++|+.+|+++|.+++||+++++++.
T Consensus 321 ~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~ 400 (660)
T PLN02861 321 RVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVE 400 (660)
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHH
Confidence 99999999988888999999999999999999988877654444567788899999999999999999999999999986
Q ss_pred HHHHHhhCC-ceeeeccCCC
Q 014742 401 EFLRVTSGA-PLTQGYGMVE 419 (419)
Q Consensus 401 ~~~~~~~~~-~v~~~YG~tE 419 (419)
+ |.+.++. +++++||+||
T Consensus 401 ~-~~~~~~~~~l~~~YG~TE 419 (660)
T PLN02861 401 E-FLRVTSCSVLSQGYGLTE 419 (660)
T ss_pred H-HHHHHcCCCeeEecchhh
Confidence 5 5555664 7999999998
No 3
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=2.3e-50 Score=417.29 Aligned_cols=415 Identities=52% Similarity=0.945 Sum_probs=331.0
Q ss_pred ceeEEccCCCCCCCCCCCCCcceecCccCCCCCCCCCCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHH
Q 014742 4 TYTVKVEEARPAADGKPSGGPVYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEV 83 (419)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el 83 (419)
+.-+-+.+.+.+.++.+.++++||++.....++.......|+.++|.+.++.+||++|+.+....+++.+++.++||+|+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el 85 (666)
T PLN02614 6 KFIFQVEEGKEGSDGRPSVGPVYRSIFAKDGFPNPIEGMDSCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEV 85 (666)
T ss_pred eeEEEecccccCCCCCCCCCCcccCcccccccCCCCCCCCcHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHH
Confidence 45677788888899999999999999777666543355679999999999999999999853100222234567899999
Q ss_pred HHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhH
Q 014742 84 YDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSI 163 (419)
Q Consensus 84 ~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 163 (419)
.++++++|++|++.|+++||+|+++++|+++++++++||+++|+++||+++.++.+++.++++.++++++|++.+....+
T Consensus 86 ~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~ 165 (666)
T PLN02614 86 YDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISEL 165 (666)
T ss_pred HHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987655544
Q ss_pred hhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeHHHHHhcCC-CCCCCCCCCCCceEEEEeCCCCCCCCCeEEeec
Q 014742 164 LSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTN 242 (419)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh 242 (419)
..........++.++.+++............+....+++++..... .........++++++|+|||||||.||||++||
T Consensus 166 ~~~~~~~~~~l~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth 245 (666)
T PLN02614 166 FKTCPNSTEYMKTVVSFGGVSREQKEEAETFGLVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISN 245 (666)
T ss_pred HHhcccccccceEEEEeCCCChHHhhhhhhcCcEEEEHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEec
Confidence 3333222223566776654321111111111233567887765431 112223346789999999999999999999999
Q ss_pred hhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCCCHHHHHHHhhhhcCeEEEecchH
Q 014742 243 QAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRV 322 (419)
Q Consensus 243 ~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~~~~~~~~~i~~~~~t~l~~~P~~ 322 (419)
+|+...+......+......+..+|++++.+|++|.+++...+..+..|+++++.++++..+++.|++++||+++++|++
T Consensus 246 ~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~~~~~l~~G~~v~~~~~~~~~~~~~i~~~~~T~~~~vP~~ 325 (666)
T PLN02614 246 ESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAHIFDRVIEECFIQHGAAIGFWRGDVKLLIEDLGELKPTIFCAVPRV 325 (666)
T ss_pred HHHHHHHHHHHhhccccccCCCCCcEEEEeccHHHHHHHHHHHHHHHhCCEEEEeCCCHHHHHHHHHHhCCeEEEecHHH
Confidence 99998876654432111124678899999999999999876666788999999987799999999999999999999999
Q ss_pred HHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHH
Q 014742 323 YDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEF 402 (419)
Q Consensus 323 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~ 402 (419)
|+.+++.++..+.+.+.+++.++++|++++.+.++.|..+....+..+.+.++++++.+|++||.+++||+++++.+ .+
T Consensus 326 ~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~ 404 (666)
T PLN02614 326 LDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ES 404 (666)
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HH
Confidence 99999888888888888899999999999888777665444556778888999999999999999999999999876 45
Q ss_pred HHHhh-CCceeeeccCCC
Q 014742 403 LRVTS-GAPLTQGYGMVE 419 (419)
Q Consensus 403 ~~~~~-~~~v~~~YG~tE 419 (419)
|.+.+ +++++++||+||
T Consensus 405 ~~~~~~~~~i~~~YG~TE 422 (666)
T PLN02614 405 FLRVVACCHVLQGYGLTE 422 (666)
T ss_pred HHHHhcCCCEEeeCchHh
Confidence 55556 589999999998
No 4
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1e-49 Score=412.02 Aligned_cols=415 Identities=46% Similarity=0.860 Sum_probs=332.1
Q ss_pred eeEEccCCCCCCCCCCCCCcceecCccCCCCCCCCCCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHH
Q 014742 5 YTVKVEEARPAADGKPSGGPVYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVY 84 (419)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~ 84 (419)
|++++.+.....+..|+++++||+......++..+....|+.++|.+.++.+|+++|+.+....++..+++.++||.|+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~ 83 (660)
T PLN02430 4 FAAQVEEGVKGKDGKPSVGPVYRNLLSKKGFPPIDSDITTAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVY 83 (660)
T ss_pred eeeeecccCCCCCCCCCCCCccccccccccccCCCCCCCCHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHHHHH
Confidence 55666544444467888999999988666665556678999999999999999999997541112334456678999999
Q ss_pred HHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHh
Q 014742 85 DAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSIL 164 (419)
Q Consensus 85 ~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 164 (419)
++++++|.+|.+.|+++||+|+|+++|+++|+++++||+++|++++|+++.++.+++.++++.++++++|++........
T Consensus 84 ~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~ 163 (660)
T PLN02430 84 EEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELL 163 (660)
T ss_pred HHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999876443333
Q ss_pred hcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeHHHHHhcCC-CCCCCCCCCCCceEEEEeCCCCCCCCCeEEeech
Q 014742 165 SCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQ 243 (419)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~ 243 (419)
.......+.++.++.+++............+....+|+++...+. .........++++++|+|||||||.||||++||+
T Consensus 164 ~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~ 243 (660)
T PLN02430 164 EPDCKSAKRLKAIVSFTSVTEEESDKASQIGVKTYSWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHE 243 (660)
T ss_pred hhhcccCCCceEEEEECCCChHHhhhhhcCCcEEEEHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecH
Confidence 222222345677777765332111111112334567888776542 1222233467899999999999999999999999
Q ss_pred hHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCCCHHHHHHHhhhhcCeEEEecchHH
Q 014742 244 AIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVY 323 (419)
Q Consensus 244 ~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~~~~~~~~~i~~~~~t~l~~~P~~~ 323 (419)
++..++.............++++|++++.+|++|.++....+.++..|+++++...++..+++.|.+++||++.++|.++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~i~~~~~~~~~l~~~l~~~~pt~~~~vP~~~ 323 (660)
T PLN02430 244 AVATFVRGVDLFMEQFEDKMTHDDVYLSFLPLAHILDRMIEEYFFRKGASVGYYHGDLNALRDDLMELKPTLLAGVPRVF 323 (660)
T ss_pred HHHHHHHHHHhhccccccCCCCCCEEEEeCcHHHHHHHHHHHHHHHcCCEEEEeCCChhhHHHHHHHhCCcEEEecHHHH
Confidence 99988766432211001246678999999999999999876667899999998877899999999999999999999999
Q ss_pred HHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHH
Q 014742 324 DRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFL 403 (419)
Q Consensus 324 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~ 403 (419)
+.+.+...+.+...++.++.+|+++++.++..++.|.......+..+.+.++++++.+|+++|.+++||+++++++.+++
T Consensus 324 ~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~ 403 (660)
T PLN02430 324 ERIHEGIQKALQELNPRRRLIFNALYKYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFL 403 (660)
T ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHH
Confidence 99999988888888899999999999999998887654444566788899999999999999999999999999997777
Q ss_pred HHhhCCceeeeccCCC
Q 014742 404 RVTSGAPLTQGYGMVE 419 (419)
Q Consensus 404 ~~~~~~~v~~~YG~tE 419 (419)
+...+.+++++||+||
T Consensus 404 ~~~~~~~i~~~YG~TE 419 (660)
T PLN02430 404 RVTSCAFVVQGYGLTE 419 (660)
T ss_pred HHhcCCCeeeecchhh
Confidence 6643578999999998
No 5
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=8.6e-50 Score=413.46 Aligned_cols=401 Identities=37% Similarity=0.645 Sum_probs=330.1
Q ss_pred eeEEccCCCCCCCCCCCCCcceecCccCCCCCC---CCCCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHH
Q 014742 5 YTVKVEEARPAADGKPSGGPVYRCIYAKDGLLE---SPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQ 81 (419)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~ 81 (419)
|+++++ .+..++++.+||+...+...-+ .+....++.++|+.+++.+|+++|+......++..++++.+||+
T Consensus 8 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lTy~ 82 (651)
T PLN02736 8 YSVVLP-----EKLQTGKWNVYRSARSPLKLVSRFPDHPEIGTLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMTYG 82 (651)
T ss_pred cceeCC-----CCCCCCCCCeecCccccccccccCCCCCCCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEEHH
Confidence 777765 6678889999998866633322 23556799999999999999999995420003333456789999
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChh
Q 014742 82 EVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP 161 (419)
Q Consensus 82 el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 161 (419)
|+.++++++|++|++.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++.++++++|++.+..+
T Consensus 83 el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~ 162 (651)
T PLN02736 83 EAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLN 162 (651)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987666
Q ss_pred hHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeHHHHHhcC-CCCCCCCCCCCCceEEEEeCCCCCCCCCeEEe
Q 014742 162 SILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVL 240 (419)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~ 240 (419)
.+..... ..+.++.+++.+.............+....+|+++.... ..........++++++|+|||||||.||||++
T Consensus 163 ~~~~~~~-~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~l 241 (651)
T PLN02736 163 TLLSCLS-EIPSVRLIVVVGGADEPLPSLPSGTGVEIVTYSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVL 241 (651)
T ss_pred HHHHHhh-cCCCceEEEEECCCchhhhhhhccCCcEEEEHHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEE
Confidence 5544433 235566777665322111111111223456788877654 12222334567999999999999999999999
Q ss_pred echhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCCCHHHHHHHhhhhcCeEEEecc
Q 014742 241 TNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVP 320 (419)
Q Consensus 241 sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~~~~~~~~~i~~~~~t~l~~~P 320 (419)
||+++..++......+ ++.++|++++.+|++|.+++..++.++..|+++++.++++..+++.|++++||+++++|
T Consensus 242 sh~~l~~~~~~~~~~~-----~~~~~d~~l~~lPl~h~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~i~~~~~t~~~~vP 316 (651)
T PLN02736 242 THGNLIANVAGSSLST-----KFYPSDVHISYLPLAHIYERVNQIVMLHYGVAVGFYQGDNLKLMDDLAALRPTIFCSVP 316 (651)
T ss_pred ecHHHHHHHHHHHhcc-----CCCCCCEEEEeCCHHHHHHHHHHHHHHHcCCEEEEeCCCHHHHHHHHHHhCCcEEecch
Confidence 9999999888866655 77889999999999999999888888999999999888999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHH
Q 014742 321 RVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVE 400 (419)
Q Consensus 321 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~ 400 (419)
.+++.+.+.+...+.+.+.+++.++++++..+...+..|.. ..+.++.++++.+++.+|+++|.+++||+++++++.
T Consensus 317 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~ 393 (651)
T PLN02736 317 RLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQALENGKN---PSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVM 393 (651)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHcCCC---CCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHH
Confidence 99999999988888999999999999999998777765532 234567788999999999999999999999999999
Q ss_pred HHHHHhhCCceeeeccCCC
Q 014742 401 EFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 401 ~~~~~~~~~~v~~~YG~tE 419 (419)
+++++.+|++++++||+||
T Consensus 394 ~~~~~~~g~~~~~~YG~TE 412 (651)
T PLN02736 394 EFLRICFGGRVLEGYGMTE 412 (651)
T ss_pred HHHHHHhCCCeEEEechHH
Confidence 9999989999999999998
No 6
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.5e-49 Score=407.87 Aligned_cols=387 Identities=24% Similarity=0.406 Sum_probs=310.3
Q ss_pred CCCCCCcceecCccCCCCCCCCCCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHh-
Q 014742 18 GKPSGGPVYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRS- 96 (419)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~- 96 (419)
....+|.+||..+.....+. ....|+.++|...++.+|+++|+.+. + ...+++.+||+|+.++++++|++|.+
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~l~~~~~~~p~~~Al~~~---~-~g~~~~~~Ty~el~~~v~~~A~~L~~~ 111 (746)
T PTZ00342 38 TNENESSVYCMKDHKKKSSL--YVYKHIMKLLLEKYKLNNNKIAIVEH---S-CGEPQNYITYGNFFKKVLSFSHSLNTY 111 (746)
T ss_pred CCCCCCCceecCchhhcccc--cccchHHHHHHHHHhhcCCceeEecc---C-CCCCceeeeHHHHHHHHHHHHHHHHHH
Confidence 34566779998886655222 45889999999999999999999853 1 12235789999999999999999997
Q ss_pred --CCCCCC-----------CeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhH
Q 014742 97 --RGVNPG-----------DRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSI 163 (419)
Q Consensus 97 --~g~~~g-----------d~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 163 (419)
.|+++| |+|+|+++|+++|+++++||+++|+++||++++++.+++.++|++++++++|++.+..+.+
T Consensus 112 ~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l 191 (746)
T PTZ00342 112 EGKGIPEKKYNEEQNNGKFKLLGLYGSNSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGL 191 (746)
T ss_pred hhcCCCcCccccccccccccEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHH
Confidence 499998 9999999999999999999999999999999999999999999999999999987777666
Q ss_pred hhcCccCCCCccEEEEecCCChhh------------------H-------------------------------------
Q 014742 164 LSCLPRCCLYLKTIVSFANVSSSQ------------------K------------------------------------- 188 (419)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~------------------~------------------------------------- 188 (419)
..... ..+.++.+++++...... .
T Consensus 192 ~~~~~-~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (746)
T PTZ00342 192 LERKN-ELPHLKKLIILDTLIKSKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKD 270 (746)
T ss_pred HHhhc-cCCCceEEEEECCCCcccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHH
Confidence 55433 345677888876522100 0
Q ss_pred --HHHHHhCceeeeHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCC
Q 014742 189 --KEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEE 266 (419)
Q Consensus 189 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~ 266 (419)
......+.....++++..............+++++.|+|||||||.||||++||+|+++.+....... .......
T Consensus 271 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~---~~~~~~~ 347 (746)
T PTZ00342 271 LKEKAKKLGISIILFDDMTKNKTTNYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHS---IFKKYNP 347 (746)
T ss_pred HHHHhhcCCCEEEEHHHHHhhcccCCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcc---cccCCCC
Confidence 00001112233455544332222223345679999999999999999999999999998876643321 0012345
Q ss_pred cEEEEecChHHHHHHHHHHHHHhcCceEEEeCCCHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHH
Q 014742 267 DTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFE 346 (419)
Q Consensus 267 d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~ 346 (419)
|++++++|++|++++...+.+++.|+++++.+.++..+++.|++++||+++++|.+|++|.+.....+.+.+..++.+|+
T Consensus 348 d~~ls~LPL~Hi~~~~~~~~~l~~G~~i~~~~~~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~ 427 (746)
T PTZ00342 348 KTHLSYLPISHIYERVIAYLSFMLGGTINIWSKDINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVK 427 (746)
T ss_pred CeEEEeCcHHHHHHHHHHHHHHHcCCEEEEeCCCHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHH
Confidence 89999999999999988778899999999987799999999999999999999999999999888888888889999999
Q ss_pred HHHHhhhhhhccCCCCCCchhhHHHH--HHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 347 FAYNYKLGNMKKGMPQNKAAPLLDSL--VFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
+|+..+....... ..+.++.+ .++++|+.+|++||.+++||+++++++.++|+..+|++++++||+||
T Consensus 428 ~a~~~~~~~~~~~-----~~~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g~~i~~gYGlTE 497 (746)
T PTZ00342 428 KILSLRKSNNNGG-----FSKFLEGITHISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLLNVNYYQGYGLTE 497 (746)
T ss_pred HHHHHHHHhhcCC-----cchHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcCCCEEEeeccCc
Confidence 9999987754422 23334433 68899999999999999999999999999999989999999999998
No 7
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=6.1e-48 Score=361.69 Aligned_cols=393 Identities=34% Similarity=0.613 Sum_probs=336.0
Q ss_pred CCCCCcceecCccCCCCCCCC-CCCCCHHHHHHHHHHhCCCCCceeeeec--------cCCC------CCceeEeeHHHH
Q 014742 19 KPSGGPVYRCIYAKDGLLESP-AGLESPWQFFCDSAKRIPNNQMLGGRKV--------SDGK------VGPYVWLTYQEV 83 (419)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~-~~~~tl~~~l~~~a~~~pd~~ai~~~~~--------~~~~------~~~~~~~Ty~el 83 (419)
.+.++.+|||.-...++...+ ....|+.+++...++.+.++.++....+ +|++ -+++.++||.|+
T Consensus 16 n~~e~~p~Rnv~~~~~L~~~~~~g~~Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev 95 (678)
T KOG1180|consen 16 NEHETAPYRNVRSFDGLVSPPNPGASTLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEV 95 (678)
T ss_pred CCCCCccccccccCCCccCCCCCCcccHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHH
Confidence 457888999998665555555 5689999999999999999999854322 2442 678889999999
Q ss_pred HHHHHHHHHHHHhCCCCCCCe-EEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhh
Q 014742 84 YDAAIRFGSAMRSRGVNPGDR-CGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPS 162 (419)
Q Consensus 84 ~~~~~~la~~L~~~g~~~gd~-V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 162 (419)
..++..++++|...|++++++ |+|+++.+.+|+.+++||++.+.++|-+...+..+-+.+-|.+++.+.||++.+.+..
T Consensus 96 ~~~~~~~gsGL~~lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~k 175 (678)
T KOG1180|consen 96 YERVHNFGSGLVKLGLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPK 175 (678)
T ss_pred HHHHHHHHHHHHHhCCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHH
Confidence 999999999999999998877 9999999999999999999999999999999999999999999999999999999986
Q ss_pred HhhcCccCCCCccEEEEecCCCh----hhHHHHHHhCceeeeHHHHHhcC-CCCCCCCCCCCCceEEEEeCCCCCCCCCe
Q 014742 163 ILSCLPRCCLYLKTIVSFANVSS----SQKKEAEELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKG 237 (419)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~ 237 (419)
+...+. ....++.+|.++.... ..-.........+.+++++...+ ....++.+..++|+|+|+|||||||.|||
T Consensus 176 l~~~l~-~~~~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~~~P~p~Dia~IMYTSGSTG~PKG 254 (678)
T KOG1180|consen 176 LKAPLK-QAKTVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENEIPPHPPKPSDIACIMYTSGSTGLPKG 254 (678)
T ss_pred HHHHHh-ccCceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCCCCCCCCCCCceEEEEEcCCCCCCCce
Confidence 655544 4478999999985321 11111122346789999999988 33234444478999999999999999999
Q ss_pred EEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC----CH-----HHHHHHh
Q 014742 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG----DV-----RYLMEDI 308 (419)
Q Consensus 238 V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~----~~-----~~~~~~i 308 (419)
|+++|+|+++.+....... ..+++.|+++.++||.|++.+.+-+.+++.|+++...+- |. +..--.+
T Consensus 255 Vml~H~NiVA~~~G~~~~v----~~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~ 330 (678)
T KOG1180|consen 255 VMLTHSNIVAGVTGVGENV----PELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDL 330 (678)
T ss_pred EEEecccHHhhhhhhcccC----cccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCcceecccchhhccCCcCcc
Confidence 9999999999998876654 267899999999999999999999999999999987642 11 1222356
Q ss_pred hhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEE
Q 014742 309 QELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAM 388 (419)
Q Consensus 309 ~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v 388 (419)
..+|||++.++|.+|.++.+...+.+.+.+.+.+.+|..||..|+..++.. -+..+.++.++|+++|.+.|++||.+
T Consensus 331 ~~lkPTiM~~VpAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~---g~~s~~ld~lVFkKIr~~lGG~lR~~ 407 (678)
T KOG1180|consen 331 TELKPTIMAAVPAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERN---GPGSPLLDALVFKKIRALLGGNLRYI 407 (678)
T ss_pred ccccchhhhhhHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhcc---CCchhhHHHHHHHHHHHHhCCceEEE
Confidence 789999999999999999999999999999999999999999999998831 35688999999999999999999999
Q ss_pred EEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 389 LSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 389 ~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
++||+|+++++.+++..++.+++.++||+||
T Consensus 408 LsGGapLS~dtQrF~nic~C~Pv~qGYGLTE 438 (678)
T KOG1180|consen 408 LSGGAPLSPDTQRFMNICFCCPVLQGYGLTE 438 (678)
T ss_pred EeCCCCCCHHHHHHHHHhccccccccccccc
Confidence 9999999999999999999999999999998
No 8
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=1.1e-47 Score=380.48 Aligned_cols=366 Identities=32% Similarity=0.586 Sum_probs=289.0
Q ss_pred CCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHH
Q 014742 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (419)
Q Consensus 41 ~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~l 120 (419)
...++...+.+.++.+|+..++... ..+.++.+||+|+.+++..+|.+|++.|+..||+|+|++.|+++|+.+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~a~~~~-----~~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~ 88 (613)
T COG1022 14 EIHTLPKRLAERVKDRPDGVALMYK-----ELGGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADL 88 (613)
T ss_pred hcccHHHHHHHHhhcCCcceeEeee-----cCCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHH
Confidence 4678899999999999998888765 46778899999999999999999999999779999999999999999999
Q ss_pred HHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeee
Q 014742 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (419)
Q Consensus 121 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (419)
||+.+|++.||+.+..+++++.++|+++++++||++..............++.+.......+.-.... ...........
T Consensus 89 a~~~~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 167 (613)
T COG1022 89 AILALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAV-EAKALVLEVFP 167 (613)
T ss_pred HHHHcCCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhcc-chhhccccccc
Confidence 99999999999999999999999999999999999996555444433332222212111111000000 00000000001
Q ss_pred HHH----HHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCcc-CCCCcEEEEecCh
Q 014742 201 WEE----FLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKV-CSEEDTYFSFLPL 275 (419)
Q Consensus 201 ~~~----~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~-~~~~d~~l~~~pl 275 (419)
+.. ............+..++|+|.|+|||||||.||||++||+|+.+++..+...+ . .+++|++++++|+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~-----~~~~~~d~~LsfLPl 242 (613)
T COG1022 168 DEGISLFLIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVL-----PPIGPGDRVLSFLPL 242 (613)
T ss_pred cccchhhhhcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhC-----CCCCCCcEEEEeCcH
Confidence 111 11111122233466799999999999999999999999999999999988877 5 8899999999999
Q ss_pred HHHHHHHHH-HHHHhcCceEEEeCCCHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhh
Q 014742 276 AHIYDQIIE-THCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLG 354 (419)
Q Consensus 276 ~h~~g~~~~-l~~l~~G~~ivl~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (419)
.|++..++. ...++.|.++.. ..+++.+++.+++++||.+.++|.+|+.+.+.+.+.+.+.+..++.+|.||+..+..
T Consensus 243 aHi~Er~~~~~~~~~~g~~~~~-~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~ 321 (613)
T COG1022 243 AHIFERAFEGGLALYGGVTVLF-KEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYK 321 (613)
T ss_pred HHHHHHHHHHHHHhhcceEEEe-cCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHH
Confidence 999999874 344444444443 449999999999999999999999999999999999999999999999999988644
Q ss_pred hhc---cCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 355 NMK---KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 355 ~~~---~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
..+ -+..........+.++|+++|+.+|+++|++++||+++++++..+++.+ |++++++|||||
T Consensus 322 ~~~~~~~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~l-Gi~i~eGYGlTE 388 (613)
T COG1022 322 KISRALLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSL-GIPILEGYGLTE 388 (613)
T ss_pred HHHhhhcccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHc-CCCeEEEecccc
Confidence 332 1111222333489999999999999999999999999999999999996 999999999999
No 9
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=6.7e-47 Score=393.36 Aligned_cols=390 Identities=32% Similarity=0.554 Sum_probs=311.1
Q ss_pred ceecCccCCCCCCCCCCCCCHHHHHHHHHHhCCCCCceeeeec--------cCC------CCCceeEeeHHHHHHHHHHH
Q 014742 25 VYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKV--------SDG------KVGPYVWLTYQEVYDAAIRF 90 (419)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~pd~~ai~~~~~--------~~~------~~~~~~~~Ty~el~~~~~~l 90 (419)
+|||+..+...........|+.++|.+.++.+||++|+..... .++ ..+++.++||+|+.++++++
T Consensus 40 ~~r~~~~~~~~~~~~~~~~t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~l 119 (696)
T PLN02387 40 AIRNARFPELVETPWEGATTLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNF 119 (696)
T ss_pred ceecCccccccccCCCCCCCHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHH
Confidence 4999986633333335678999999999999999999953210 011 12566789999999999999
Q ss_pred HHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccC
Q 014742 91 GSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRC 170 (419)
Q Consensus 91 a~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~ 170 (419)
|++|.+.|+++||+|+++++|+++|+++++||+++|++++||++.++.+++.++++.++++++|++.+....+.+... .
T Consensus 120 A~~L~~lG~~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~-~ 198 (696)
T PLN02387 120 ASGLVALGHNKEERVAIFADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISS-Q 198 (696)
T ss_pred HHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhh-c
Confidence 999999999999999999999999999999999999999999999999999999999999999999877666655433 3
Q ss_pred CCCccEEEEecCCChhhHHH-HHHhCceeeeHHHHHhcC-CCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHH
Q 014742 171 CLYLKTIVSFANVSSSQKKE-AEELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAE 248 (419)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~ 248 (419)
.+.++.++.+++........ .........+|+++...+ ..........++++++|+|||||||.||||++||++++.+
T Consensus 199 ~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~ 278 (696)
T PLN02387 199 LETVKRVIYMDDEGVDSDSSLSGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVAT 278 (696)
T ss_pred cCCceEEEEECCCCchhhhhhhccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHH
Confidence 35677888887543211100 011223456788776654 2122223346799999999999999999999999999988
Q ss_pred hhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC----C-----HHHHHHHhhhhcCeEEEec
Q 014742 249 VLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG----D-----VRYLMEDIQELKPTMFSGV 319 (419)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~----~-----~~~~~~~i~~~~~t~l~~~ 319 (419)
+......+ ..+.++|++++.+|++|++++...+.++..|+++.+... + ...+++.+++++||++.++
T Consensus 279 ~~~~~~~~----~~~~~~d~~l~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~v 354 (696)
T PLN02387 279 VAGVMTVV----PKLGKNDVYLAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAV 354 (696)
T ss_pred HHHHHhhc----CCCCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEeh
Confidence 87754432 246788999999999999999876667778888776432 1 2345678999999999999
Q ss_pred chHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccCC--CCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCH
Q 014742 320 PRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGM--PQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPI 397 (419)
Q Consensus 320 P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~ 397 (419)
|.++++|.+.....+.+.+.+.+.+|++++..++..++... .....+..++.+.++++++.+|+++|.+++||+++++
T Consensus 355 P~~l~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~ 434 (696)
T PLN02387 355 PAILDRVRDGVRKKVDAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSG 434 (696)
T ss_pred hHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCH
Confidence 99999999988888888889999999999998877664211 0122456789999999999999999999999999999
Q ss_pred HHHHHHHHhhCCceeeeccCCC
Q 014742 398 HVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 398 ~~~~~~~~~~~~~v~~~YG~tE 419 (419)
++.++++..+|++++++||+||
T Consensus 435 ~~~~~~~~~~g~~v~~~YG~TE 456 (696)
T PLN02387 435 DTQRFINICLGAPIGQGYGLTE 456 (696)
T ss_pred HHHHHHHHHcCCCeeEeechhh
Confidence 9999998888999999999998
No 10
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.6e-45 Score=381.18 Aligned_cols=401 Identities=28% Similarity=0.502 Sum_probs=312.1
Q ss_pred CceeEEccCCCCCCCCCCCCCcceecCccCC----CCCCCCCCCCCHHHHHHHHHHhCCCCCceeeeec----------c
Q 014742 3 ETYTVKVEEARPAADGKPSGGPVYRCIYAKD----GLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKV----------S 68 (419)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~tl~~~l~~~a~~~pd~~ai~~~~~----------~ 68 (419)
+.++++++ +...++.+++||+..... .+........|+.++|...++.+||++|+.+... .
T Consensus 30 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~ 104 (700)
T PTZ00216 30 GPQNVPVP-----GTETENASAIYRIAGVTDEEHERLRNEWYYGPNFLQRLERICKERGDRRALAYRPVERVEKEVVKDA 104 (700)
T ss_pred CCcceecC-----CCCCCCCCCcccCcccccchhcccccccCCCCCHHHHHHHHHHhCCCCCeEEEeccccccccccccC
Confidence 44677765 334566788999865432 2222223567999999999999999999987410 0
Q ss_pred CCC--------CCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhH
Q 014742 69 DGK--------VGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANA 140 (419)
Q Consensus 69 ~~~--------~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~ 140 (419)
++. .++++++||.|+.++++++|++|++.|+++||+|+++++|+++++++++||+++|++++|+++.++.++
T Consensus 105 ~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~ 184 (700)
T PTZ00216 105 DGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDA 184 (700)
T ss_pred CCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHH
Confidence 111 124578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeHHHHHhcCC----CCCCCCC
Q 014742 141 VEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT----LDCELPP 216 (419)
Q Consensus 141 l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 216 (419)
+.++++.++++++|++......+.............++.+++.... .........+|+++...+. .......
T Consensus 185 l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~~~~~ii~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (700)
T PTZ00216 185 LAYALRETECKAIVCNGKNVPNLLRLMKSGGMPNTTIIYLDSLPAS----VDTEGCRLVAWTDVVAKGHSAGSHHPLNIP 260 (700)
T ss_pred HHhhhhccCccEEEECHHHHHHHHHhhhhccCCceEEEEECCCccc----cccCCceEEEHHHHHHhCCccccccccCCC
Confidence 9999999999999998766555544332211112245555442211 0111234677888876541 1111233
Q ss_pred CCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEE
Q 014742 217 KKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGF 296 (419)
Q Consensus 217 ~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl 296 (419)
..++++++|+|||||||.||||++||+|+.+++..+...+........++|++++++|++|.+++......+..|+++++
T Consensus 261 ~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~ 340 (700)
T PTZ00216 261 ENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALEDRLNDLIGPPEEDETYCSYLPLAHIMEFGVTNIFLARGALIGF 340 (700)
T ss_pred CCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHHhhcccccCCCCCCCEEEEEChHHHHHHHHHHHHHHHcCCEEEE
Confidence 46789999999999999999999999999988877554331101123678999999999999998776666888888776
Q ss_pred eCCCHHHHHH-------HhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccCCCCCCchhhH
Q 014742 297 WRGDVRYLME-------DIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLL 369 (419)
Q Consensus 297 ~~~~~~~~~~-------~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (419)
. ++..+.+ .+++++||++.++|.+++.+.+.....+...+.+++.+|++|+..++..+..|. ..+.+
T Consensus 341 ~--~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~----~~~~~ 414 (700)
T PTZ00216 341 G--SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGK----DTPYW 414 (700)
T ss_pred C--CHHHhhhhhccccchHHHcCCcEEEechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCC----CCchH
Confidence 3 4555554 688999999999999999999998888888889999999999999988777652 34567
Q ss_pred HHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 370 DSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 370 ~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
+...|+.+++.+|+++|.+++||+++++++.++++..++ +++++||+||
T Consensus 415 ~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~~-~l~~~YG~TE 463 (700)
T PTZ00216 415 NEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVFG-MVIQGWGLTE 463 (700)
T ss_pred HHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHhh-hHhhccCccc
Confidence 888999999999999999999999999999999988878 9999999998
No 11
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=2e-42 Score=319.77 Aligned_cols=323 Identities=20% Similarity=0.312 Sum_probs=270.6
Q ss_pred cCCCCCCCCCCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcC
Q 014742 31 AKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGS 110 (419)
Q Consensus 31 ~~~~~~~~~~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~ 110 (419)
+.++-.+.|....|+++.|+..++..||+.|.++. ..+ .++||+|+...++.+|.+|.+.|+++||+|++..|
T Consensus 38 ~~~g~~~ipl~~~Tigq~l~~~t~~v~dkea~Vf~---~eg----~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgp 110 (596)
T KOG1177|consen 38 YVHGCSQIPLDSETIGQLLETTTERVPDKEAAVFD---HEG----IRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGP 110 (596)
T ss_pred ccCCCCCCCcccccHHHHHHHHhhccCcceEEEEe---ecc----chhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecC
Confidence 33455566788999999999999999999999986 222 56999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCC-----hhhHhhcCc------------cCCCC
Q 014742 111 NCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK-----IPSILSCLP------------RCCLY 173 (419)
Q Consensus 111 n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~------------~~~~~ 173 (419)
|+.+|+...+||+++|.+.+++||.+...++++.|++.+++.+|+.... .+..++.+. +.++.
T Consensus 111 N~~~w~l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~ 190 (596)
T KOG1177|consen 111 NSYEWVLCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPE 190 (596)
T ss_pred ChHHHHHHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCcccccccccc
Confidence 9999999999999999999999999999999999999999999998643 223333322 23355
Q ss_pred ccEEEEecCCChhhHHHHHHhCceeeeHHHHHhcCCCC------CCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHH
Q 014742 174 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLD------CELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVA 247 (419)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~ 247 (419)
+.+++..+++.. -.+.+.+.+++..+... .......+++.+.|.|||||||.|||+.+||.|+++
T Consensus 191 lthvi~~~ed~~---------~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~N 261 (596)
T KOG1177|consen 191 LTHVILADEDHP---------LPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLN 261 (596)
T ss_pred ceEEEecCCCCc---------CCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhh
Confidence 667777764332 12456677776655211 112234579999999999999999999999999999
Q ss_pred HhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHH-HHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEEEecchHHH
Q 014742 248 EVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYD 324 (419)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~-~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l~~~P~~~~ 324 (419)
++......+ ++.+++++++..|++|.+|... ++++|..|++++++.. ++.+.+++|+++++|.++++|+++.
T Consensus 262 na~~vg~r~-----g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~ 336 (596)
T KOG1177|consen 262 NARAVGARA-----GYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFV 336 (596)
T ss_pred hHHHHHHHh-----CcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHH
Confidence 999977766 8888889999999999999776 8999999999999754 9999999999999999999999999
Q ss_pred HHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHH
Q 014742 325 RIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLR 404 (419)
Q Consensus 325 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~ 404 (419)
.|++ .+....++++ ++|.++.||+++|+++.+.+.
T Consensus 337 Dlln-------------------------------------~~~~~~~~~s--------~lr~~vigGa~~s~eLlk~iv 371 (596)
T KOG1177|consen 337 DLLN-------------------------------------IPQKQQVDLS--------SLRKGVIGGAPVSPELLKLIV 371 (596)
T ss_pred HHhc-------------------------------------chhhccCchh--------hhhhheeCCCCCCHHHHHHHH
Confidence 9986 4445556665 889999999999999999999
Q ss_pred HhhCCc-eeeeccCCC
Q 014742 405 VTSGAP-LTQGYGMVE 419 (419)
Q Consensus 405 ~~~~~~-v~~~YG~tE 419 (419)
....+. +...||+||
T Consensus 372 ~~~~m~~i~v~YG~TE 387 (596)
T KOG1177|consen 372 NQMNMKDIAVAYGLTE 387 (596)
T ss_pred HhhCceeeEEEeeccc
Confidence 966553 888999998
No 12
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=1.8e-42 Score=338.95 Aligned_cols=304 Identities=21% Similarity=0.242 Sum_probs=250.0
Q ss_pred HHHHHHH-hCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHh-CCCCCCCeEEEEcCCchhHHHHHHHHHHc
Q 014742 48 FFCDSAK-RIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRS-RGVNPGDRCGIYGSNCPEWIIAMEACNSQ 125 (419)
Q Consensus 48 ~l~~~a~-~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~-~g~~~gd~V~l~~~n~~~~~~~~lA~~~~ 125 (419)
.++++.. ..+|+.|+++. +..... +.+||.||.+.++++|+.|++ .|+ +||+|++++|+.++.++++|||+++
T Consensus 14 ~~dr~~~~~~~~~~aii~~---~e~~~~-~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA~~ri 88 (528)
T COG0365 14 ALDRHLEADRPDDTAIIFD---GEDGLF-RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLATARI 88 (528)
T ss_pred hhhhhhhccCCCceEEEEE---cCCCCc-eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHHHHHc
Confidence 5677766 35789999987 443334 899999999999999999986 678 9999999999999999999999999
Q ss_pred CCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccC--CCCccEEEEecCCChhhHHHHHHhCceeeeHHH
Q 014742 126 AITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRC--CLYLKTIVSFANVSSSQKKEAEELGVSCFSWEE 203 (419)
Q Consensus 126 G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (419)
|++++|+.+.++++.+...+..+++++||+++............. ...+..+++..... ..|.+
T Consensus 89 GAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~~--------------~~~~~ 154 (528)
T COG0365 89 GAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRLG--------------LWYDE 154 (528)
T ss_pred CCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEecccc--------------ccHHH
Confidence 999999999999999999999999999999987655332211100 00011133333221 45777
Q ss_pred HHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHH
Q 014742 204 FLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII 283 (419)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~ 283 (419)
................+|+++++|||||||+||||+++|+.+........... +.+.++|++++..++.|++|+..
T Consensus 155 ~~~~~~~~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~----~~~~~~Dv~w~~ad~GW~~g~~~ 230 (528)
T COG0365 155 AVEKASEKFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFH----GDLLPGDRFWNSSDPGWIYGLWY 230 (528)
T ss_pred HhhccCCCCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHh----hCCCCCCEEEeCCCchhhhCchH
Confidence 76665444445557899999999999999999999999998877776654422 36779999999999999999998
Q ss_pred -HHHHHhcCceEEEeCC----CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhcc
Q 014742 284 -ETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKK 358 (419)
Q Consensus 284 -~l~~l~~G~~ivl~~~----~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (419)
++.+|..|+++++.++ +++.+++.|+++++|++++.|+.+++|.+.
T Consensus 231 ~v~~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~----------------------------- 281 (528)
T COG0365 231 SVFSPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKL----------------------------- 281 (528)
T ss_pred HHHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhc-----------------------------
Confidence 8899999999999876 389999999999999999999999999762
Q ss_pred CCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 359 GMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 359 ~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
.. .+.++++ +||.+.++|||++++.++++.+.+|++|.+.||+||
T Consensus 282 -------g~-~~~~dls--------sLr~~~SaGEPLnpe~~~w~~~~~g~~i~d~~gqTE 326 (528)
T COG0365 282 -------GL-GEPYDLS--------SLRVLGSAGEPLNPEAFEWFYSALGVWILDIYGQTE 326 (528)
T ss_pred -------CC-cccccch--------hheeeeccCCCCCHHHHHHHHHHhCCCEeccccccc
Confidence 11 4556665 999999999999999999999999999999999998
No 13
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=5e-41 Score=361.52 Aligned_cols=363 Identities=19% Similarity=0.271 Sum_probs=290.2
Q ss_pred CCCCCCCCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCch
Q 014742 34 GLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCP 113 (419)
Q Consensus 34 ~~~~~~~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~ 113 (419)
.+|.. ....|+.++|.+.++++|+++++... . ..++++++||+|+.++++++|.+|++.|+++||+|+++++|++
T Consensus 419 ~~~~~-~~~~Tl~dll~~~a~~~pd~~al~~~---~-~~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~ 493 (1452)
T PTZ00297 419 EYNPL-AGVRSLGEMWERSVTRHSTFRCLGQT---S-ESGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASR 493 (1452)
T ss_pred cCCCc-ccCCCHHHHHHHHHHHCCCCeEEEEe---c-cCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH
Confidence 34444 34569999999999999999998632 1 1234568999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhH-HHHH
Q 014742 114 EWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQK-KEAE 192 (419)
Q Consensus 114 ~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 192 (419)
+|+++++||+.+|++++|+++ +.+++.++++.+++++||++.+....+.+... ..++.++++++...... ....
T Consensus 494 Ewvia~lA~~~~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~---~~Lr~IIv~d~~~~~~~~~~~~ 568 (1452)
T PTZ00297 494 NIVILEVACALYGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRS---RKLETVVYTHSFYDEDDHAVAR 568 (1452)
T ss_pred HHHHHHHHHHHcCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhcc---cCCcEEEEECCCcccccccccc
Confidence 999999999999999999975 46799999999999999999877776655432 36888888864211000 0000
Q ss_pred HhCceeeeHHHHHhcCC--CCCCCCCCCCCceEEEEe---CCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCc
Q 014742 193 ELGVSCFSWEEFLQLGT--LDCELPPKKKTNISTIMY---TSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEED 267 (419)
Q Consensus 193 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~---TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d 267 (419)
..+..+.+|+++...+. .........+++++.|+| ||||||.||||++||+|++.++..+.... ......++|
T Consensus 569 ~~~i~~~s~~~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~--~~~~~~~~D 646 (1452)
T PTZ00297 569 DLNITLIPYEFVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTG--VLPSSFKKH 646 (1452)
T ss_pred cCCcceeeHHHHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhc--cccCCCCCC
Confidence 11234677999987662 111123346788999996 99999999999999999999998865421 001345789
Q ss_pred EEEEecChHHHHHHHHHHHHHhcCceEEEeCCCHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHH
Q 014742 268 TYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEF 347 (419)
Q Consensus 268 ~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~ 347 (419)
++++.+||+|+++....+.++..|+++.+ .+++.+++.|++++||+++++|.+|+.+.+.+++++...+++++++|++
T Consensus 647 ~~Ls~LPLaHI~er~~~~~~l~~G~~I~~--~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~ 724 (1452)
T PTZ00297 647 LMVHFTPFAMLFNRVFVLGLFAHGSAVAT--VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFER 724 (1452)
T ss_pred EEEEechHHHHHHHHHHHHHHHcCCEEEe--CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Confidence 99999999999997777788999999874 3799999999999999999999999999999998888888999999999
Q ss_pred HHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccC--CCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 348 AYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAA--PLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~--~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
|++++.+..+.| ......++.+.|+++|+.+|+++|.+++||+ +++..+.. ++++..+||+||
T Consensus 725 A~~~k~~~~~~g---~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~~------~i~i~~g~glTE 789 (1452)
T PTZ00297 725 AFQLRSRLINIH---RRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLLE------HISVCYVPCLRE 789 (1452)
T ss_pred HHHHHHHHHhcC---CCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHhC------CceEEEecceEE
Confidence 999987766654 2345678999999999999999999999984 44432222 688999999987
No 14
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.6e-41 Score=341.64 Aligned_cols=312 Identities=27% Similarity=0.400 Sum_probs=253.8
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHH
Q 014742 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (419)
Q Consensus 40 ~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~ 119 (419)
....++.+.|..+++.+|+++|+.+. +.. .++||.||.++++++|.+|++.|+++||+|+++++|++++++++
T Consensus 8 ~~~~~~~~~l~~~a~~~~~~~a~~~~---~~~----~~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~ 80 (534)
T COG0318 8 TAELTLASLLERAARRNPDRPALIFL---GRG----GRLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAF 80 (534)
T ss_pred cccccHHHHHHHHHHhCCCceEEEEc---CCC----ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHH
Confidence 45789999999999999999999986 432 15999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCcee-
Q 014742 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSC- 198 (419)
Q Consensus 120 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 198 (419)
+||+++|++++|+|+.++..++.++++.+++++++++....... ............+......... .
T Consensus 81 ~a~~~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~ 148 (534)
T COG0318 81 LAALRAGAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALL-EAVAEALPVVLVVLLVGDADDR-----------LP 148 (534)
T ss_pred HHHHhcCEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHH-HHHhccCCcceEEEeccccccc-----------cc
Confidence 99999999999999999999999999999999999998843333 3222222222222222222110 0
Q ss_pred eeHHHHHhcC-CCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCcc--CCCCcEEEEecCh
Q 014742 199 FSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKV--CSEEDTYFSFLPL 275 (419)
Q Consensus 199 ~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~--~~~~d~~l~~~pl 275 (419)
.++++..... ..........++++++++|||||||.||||++||+|+..++..+...+ . ++++|++++++|+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~-----~~~~~~~d~~l~~lPl 223 (534)
T COG0318 149 ITLEALAAEGPGPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAAL-----GGGLTPDDVVLSWLPL 223 (534)
T ss_pred ccHHHHhhccCCcccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHh-----cccCCCCceEEEecCh
Confidence 2455553333 122222226789999999999999999999999999999988887777 6 8889999999999
Q ss_pred HHHHHHHH-HHHHHhcCceEEEeC---CCHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHh
Q 014742 276 AHIYDQII-ETHCIHKGCSIGFWR---GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNY 351 (419)
Q Consensus 276 ~h~~g~~~-~l~~l~~G~~ivl~~---~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (419)
+|.+|+.. ++.++..|+++++.+ ++++.++..+.++++|+++++|+++..+++.
T Consensus 224 ~H~~Gl~~~~~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~---------------------- 281 (534)
T COG0318 224 FHIFGLIVGLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDN---------------------- 281 (534)
T ss_pred HHHHHHHHHHHHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhC----------------------
Confidence 99999997 556699999999987 3999999999999999999999999998762
Q ss_pred hhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhC-CceeeeccCCC
Q 014742 352 KLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG-APLTQGYGMVE 419 (419)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~-~~v~~~YG~tE 419 (419)
+.....+++ .++|.+++||+++++++++++++.|+ ..++++||+||
T Consensus 282 ---------------~~~~~~~~~-------~~lr~~~~gg~~~~~~~~~~~~~~~~~~~i~~~YG~TE 328 (534)
T COG0318 282 ---------------PEKDDDDLS-------SSLRLVLSGGAPLPPELLERFEERFGPIAILEGYGLTE 328 (534)
T ss_pred ---------------CccCccccc-------cceEEEEecCCcCCHHHHHHHHHHhCCCceEEeecccc
Confidence 111111111 13999999999999999999999997 57999999998
No 15
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=8.6e-40 Score=333.72 Aligned_cols=317 Identities=19% Similarity=0.134 Sum_probs=248.0
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHH
Q 014742 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (419)
Q Consensus 42 ~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA 121 (419)
.-++.++|.+.++.+|+++|+++. + +.+||.||.++++++|++|.++|+++||+|+++++|+++++++++|
T Consensus 6 ~~~~~~~~~~~~~~~p~~~a~~~~----~-----~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la 76 (563)
T PLN02860 6 QAHICQCLTRLATLRGNAVVTISG----N-----RRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLA 76 (563)
T ss_pred hhHHHHHHHHHHHhcCCceEEecC----C-----ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 567899999999999999999853 2 4799999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeH
Q 014742 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (419)
Q Consensus 122 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (419)
|+++|++++|+++.++.+++.++++.+++++++++...............+.+..++..++........ ......+
T Consensus 77 ~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----~~~~~~~ 152 (563)
T PLN02860 77 VACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPSSSVFIF----LNSFLTT 152 (563)
T ss_pred HhhccEEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCcccccccc----hhhcccc
Confidence 999999999999999999999999999999999987653322222111223334444443321100000 0001112
Q ss_pred HHHHhcC-CCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHH
Q 014742 202 EEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYD 280 (419)
Q Consensus 202 ~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g 280 (419)
+++.... ..........++++++++|||||||.||||.++|.++..++......+ +++.+|++++.+|++|.++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~-----~~~~~d~~l~~~pl~h~~g 227 (563)
T PLN02860 153 EMLKQRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIV-----GYGEDDVYLHTAPLCHIGG 227 (563)
T ss_pred chhccCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhc-----CCCCCCEEEEecCchhhcc
Confidence 2221111 001111233578999999999999999999999999988776655444 7888999999999999999
Q ss_pred HHHHHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccC
Q 014742 281 QIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKG 359 (419)
Q Consensus 281 ~~~~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (419)
+..++.++..|+++++.+. ++..+++.|+++++|++.++|.++..|++.....
T Consensus 228 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~-------------------------- 281 (563)
T PLN02860 228 LSSALAMLMVGACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKS-------------------------- 281 (563)
T ss_pred HHHHHHHHHcCceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhh--------------------------
Confidence 9888899999999999876 9999999999999999999999999987632110
Q ss_pred CCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhh-CCceeeeccCCC
Q 014742 360 MPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGMVE 419 (419)
Q Consensus 360 ~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~tE 419 (419)
....++ +++|.+++||+++++++.++|++.| +.++++.||+||
T Consensus 282 ---------~~~~~~--------~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~TE 325 (563)
T PLN02860 282 ---------MTWKVF--------PSVRKILNGGGSLSSRLLPDAKKLFPNAKLFSAYGMTE 325 (563)
T ss_pred ---------hccccc--------cceeEEEeCCCcCCHHHHHHHHHhcCCCceecCCCccc
Confidence 000111 3899999999999999999999988 789999999998
No 16
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=1.1e-39 Score=338.21 Aligned_cols=326 Identities=16% Similarity=0.209 Sum_probs=244.1
Q ss_pred CCHHHHHHHHHH-hCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHH
Q 014742 43 ESPWQFFCDSAK-RIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (419)
Q Consensus 43 ~tl~~~l~~~a~-~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA 121 (419)
+...++|+++++ .+|+++|+++. +.+.+..+.+||.||.++++++|++|++.|+++||+|+++++|++++++++||
T Consensus 88 N~~~~~l~~~~~~~~~~~~Al~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA 164 (666)
T PLN02654 88 NICYNCLDRNVEAGNGDKIAIYWE---GNEPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLA 164 (666)
T ss_pred eHHHHHHHHhhccCCCCCEEEEEE---cCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 344667777776 48999999875 33344457899999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhh---------HhhcCcc---CCCCccEEEEecCCChhhHH
Q 014742 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPS---------ILSCLPR---CCLYLKTIVSFANVSSSQKK 189 (419)
Q Consensus 122 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~---------~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 189 (419)
|+++|++++|+++.++.+++..+++.++++++|+++..... +...... .......++...........
T Consensus 165 ~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (666)
T PLN02654 165 CARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLAMKRE 244 (666)
T ss_pred HHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEeccccccccc
Confidence 99999999999999999999999999999999998764321 1111000 00111222222221100000
Q ss_pred HHHHhCceeeeHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHH-hhhhhhhhhhcCccCCCCcE
Q 014742 190 EAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAE-VLSVDQMFVVTGKVCSEEDT 268 (419)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~-~~~~~~~~~~~~~~~~~~d~ 268 (419)
...-.......|+++........+.....++++++|+|||||||.||||+++|++++.. .......+ +++++|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~-----~~~~~d~ 319 (666)
T PLN02654 245 DTKWQEGRDVWWQDVVPNYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAF-----DYKPTDV 319 (666)
T ss_pred ccccccCCcccHHHHhhcCCCCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhc-----CCCCCcE
Confidence 00000001123555543222122223356799999999999999999999999998643 34444444 7888999
Q ss_pred EEEecChHHHHHHHH-HHHHHhcCceEEEeCC-----CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHH
Q 014742 269 YFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSK 342 (419)
Q Consensus 269 ~l~~~pl~h~~g~~~-~l~~l~~G~~ivl~~~-----~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~ 342 (419)
+++..|++|.+|+.. ++.+|+.|+++++.++ ++..+++.|+++++|+++++|++++.|.+.-
T Consensus 320 ~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~------------ 387 (666)
T PLN02654 320 YWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDG------------ 387 (666)
T ss_pred EEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhC------------
Confidence 999999999999876 7788999999999863 7899999999999999999999999986520
Q ss_pred HHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhC---CceeeeccCCC
Q 014742 343 KLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG---APLTQGYGMVE 419 (419)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~---~~v~~~YG~tE 419 (419)
.......+++ +||.++++|+++++++++++.+.+| +++.+.||+||
T Consensus 388 -----------------------~~~~~~~~l~--------~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE 436 (666)
T PLN02654 388 -----------------------DEYVTRHSRK--------SLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTE 436 (666)
T ss_pred -----------------------ccccccCChh--------heeEEEEecCCCCHHHHHHHHHHhCCCCCceeccccccc
Confidence 0011222333 8999999999999999999999997 68999999998
No 17
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-39 Score=331.82 Aligned_cols=310 Identities=18% Similarity=0.174 Sum_probs=252.2
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHH
Q 014742 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (419)
Q Consensus 43 ~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~ 122 (419)
.++.++|.+.++.+||++|+++. + +.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||
T Consensus 49 ~~~~~~~~~~a~~~pd~~Al~~~---~------~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~ 119 (549)
T PRK07788 49 GPFAGLVAHAARRAPDRAALIDE---R------GTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAA 119 (549)
T ss_pred chHHHHHHHHHHHCCCceEEEEC---C------CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 48999999999999999999864 2 47999999999999999999999999999999999999999999999
Q ss_pred HHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeHH
Q 014742 123 NSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWE 202 (419)
Q Consensus 123 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (419)
+++|++++|+++.++.+++.++++.++++++|++.+....+.+.. .....+..++...+.... ...+...++
T Consensus 120 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 191 (549)
T PRK07788 120 GKVGARIILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALP-PDLGRLRAWGGNPDDDEP-------SGSTDETLD 191 (549)
T ss_pred HhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhc-cccccceEEEEecCcccc-------CCcCcccHH
Confidence 999999999999999999999999999999999987666543321 111222232222211110 012345677
Q ss_pred HHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHH
Q 014742 203 EFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQI 282 (419)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~ 282 (419)
++...... .......++.++++|||||||.||+|.++|.++...+......+ .+..+|++++..|++|.+|+.
T Consensus 192 ~~~~~~~~--~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~d~~~~~~p~~~~~g~~ 264 (549)
T PRK07788 192 DLIAGSST--APLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRV-----PFRAGETTLLPAPMFHATGWA 264 (549)
T ss_pred HHhcCCCC--CCCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhC-----CCCcCCeEEEccchHHHHHHH
Confidence 77654321 11223456789999999999999999999999998877765555 777889999999999999998
Q ss_pred HHHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccCCC
Q 014742 283 IETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMP 361 (419)
Q Consensus 283 ~~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (419)
.++.++..|+++++.+. ++..+++.++++++|++.++|.++..+++.....
T Consensus 265 ~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~---------------------------- 316 (549)
T PRK07788 265 HLTLAMALGSTVVLRRRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEV---------------------------- 316 (549)
T ss_pred HHHHHHHhCCEEEECCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccc----------------------------
Confidence 77888999999999866 9999999999999999999999999986521110
Q ss_pred CCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 362 QNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 362 ~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
....++ .+||.+++||+++++++.+++++.++.++++.||+||
T Consensus 317 -------~~~~~~--------~~lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE 359 (549)
T PRK07788 317 -------LAKYDT--------SSLKIIFVSGSALSPELATRALEAFGPVLYNLYGSTE 359 (549)
T ss_pred -------cCCCCC--------CceeEEEEeCCCCCHHHHHHHHHHhCccceeccCcch
Confidence 001112 3899999999999999999999999999999999998
No 18
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=5.7e-40 Score=323.00 Aligned_cols=287 Identities=29% Similarity=0.425 Sum_probs=236.8
Q ss_pred eEeeHHHHHHHHHHHHHHHHhCC--CCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEE
Q 014742 76 VWLTYQEVYDAAIRFGSAMRSRG--VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIA 153 (419)
Q Consensus 76 ~~~Ty~el~~~~~~la~~L~~~g--~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 153 (419)
+.+||.|+..++.++|..|.+.| +++||+|++++||++++..+++||..+|++..++||.+...++...++.++++++
T Consensus 44 ~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~kii 123 (537)
T KOG1176|consen 44 RELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPKLI 123 (537)
T ss_pred cEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccccCcccCHHHHHHHHHhcCCeEE
Confidence 58999999999999999999875 8899999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeee-HHHHHhcCCCCCCCCCCCCCceEEEEeCCCCC
Q 014742 154 FVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS-WEEFLQLGTLDCELPPKKKTNISTIMYTSGTT 232 (419)
Q Consensus 154 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtT 232 (419)
|++.+..+.+.+...... ..++++......... ........ ++++........ ......+|++.++||||||
T Consensus 124 f~d~~~~~~i~~~~~~~~---~~i~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~dd~~~il~SSGTT 196 (537)
T KOG1176|consen 124 FVDEDFYDKISEATSKLA---LKIIVLTGDEGVISI---SDLVEDLDAFEDLMPEGLPDG-IRPVSEDDTAAILYSSGTT 196 (537)
T ss_pred EEcCchHHHHHHHHhhcC---CceEEEecccCcccc---ccccccccchhhccccCCCcc-cccCCCCCeEEEecCCCCC
Confidence 999999988866654332 455555443110000 00001111 445444442222 5566789999999999999
Q ss_pred CCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHH-HHhcCceEEEeCC-CHHHHHHHhhh
Q 014742 233 GEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETH-CIHKGCSIGFWRG-DVRYLMEDIQE 310 (419)
Q Consensus 233 G~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~-~l~~G~~ivl~~~-~~~~~~~~i~~ 310 (419)
|.||||.+||++++.+........ .....|+.++.+|++|.+|+..++. .+..|+++++.+. ++..+++.|++
T Consensus 197 g~PKgV~lsHr~~~~~~~~~~~~~-----~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~~~~~~i~k 271 (537)
T KOG1176|consen 197 GLPKGVVLSHRNLIANTLSIKIGW-----ELTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTIICLRKFDAELFLDLIEK 271 (537)
T ss_pred CCCceEEEecHHHHHHHHHhhhcc-----cCCCCceEEEechHHHHhHHHHHHHHHHhCCceEEECCCCCHHHHHHHHHH
Confidence 999999999999999877644433 6667899999999999999998665 5666777777777 99999999999
Q ss_pred hcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEE
Q 014742 311 LKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLS 390 (419)
Q Consensus 311 ~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~ 390 (419)
|++|+++++|.++..|++ ++....++|+ ++|.+.+
T Consensus 272 ykvt~~~~vP~~~~~l~~-------------------------------------~p~~~~~~l~--------sl~~v~~ 306 (537)
T KOG1176|consen 272 YKVTHLFLVPPVLNMLAK-------------------------------------SPIVKKYDLS--------SLRSVLS 306 (537)
T ss_pred hCEEEEEcChHHHHHHhc-------------------------------------CCccCcccCC--------ccEEEEe
Confidence 999999999999999976 4455666665 9999999
Q ss_pred ccCCCCHHHHHHHHHhhC-CceeeeccCCC
Q 014742 391 GAAPLPIHVEEFLRVTSG-APLTQGYGMVE 419 (419)
Q Consensus 391 ~G~~l~~~~~~~~~~~~~-~~v~~~YG~tE 419 (419)
||+++++++.++++++++ ..|.++|||||
T Consensus 307 gga~~~~~~~~~~~~~l~~~~v~q~YGmTE 336 (537)
T KOG1176|consen 307 GGAPLSPATLEKVKERLPNVTVIQGYGMTE 336 (537)
T ss_pred cCCCCCHHHHHHHHHhCCCceEEEeecccc
Confidence 999999999999999998 88999999999
No 19
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=8.3e-40 Score=337.74 Aligned_cols=323 Identities=17% Similarity=0.186 Sum_probs=248.3
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHH
Q 014742 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (419)
Q Consensus 42 ~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA 121 (419)
.+...++|++++..+|+++|+++. +.+.+..+.+||.||.++++++|++|++.|+++||+|+++++|+++++++++|
T Consensus 51 ~n~~~~~l~~~~~~~p~~~Al~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA 127 (628)
T TIGR02316 51 TNLCHNALDRHLDERGEQLALVTV---SSETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLA 127 (628)
T ss_pred eeHHHHHHHHHhCcCCCCeEEEEE---cCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 444567888888889999999875 43334457899999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCCh---------hhHhhcCccCCCCccEEEEecCCChhhHHHHH
Q 014742 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI---------PSILSCLPRCCLYLKTIVSFANVSSSQKKEAE 192 (419)
Q Consensus 122 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (419)
|+++|++++|+++.++.+++.+.++.++++++|+++... ..+.............+++++.......
T Consensus 128 ~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~---- 203 (628)
T TIGR02316 128 CARIGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAPMR---- 203 (628)
T ss_pred HHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCcC----
Confidence 999999999999999999999999999999999986431 1111111111123445565553211000
Q ss_pred HhCceeeeHHHHHhcCC-CCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHH-hhhhhhhhhhcCccCCCCcEEE
Q 014742 193 ELGVSCFSWEEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAE-VLSVDQMFVVTGKVCSEEDTYF 270 (419)
Q Consensus 193 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~-~~~~~~~~~~~~~~~~~~d~~l 270 (419)
........|.++..... ...+.....++++++|+|||||||.||||+++|.+++.. .......+ ++.++|+++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-----~~~~~d~~~ 278 (628)
T TIGR02316 204 LIPGRDVDYAALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIF-----GIRAGQVMF 278 (628)
T ss_pred cccCccccHHHHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhc-----CCCCCcEEE
Confidence 00001234555544321 112222346789999999999999999999999998644 33333334 778899999
Q ss_pred EecChHHHHHHHH-HHHHHhcCceEEEeCC-----CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHH
Q 014742 271 SFLPLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKL 344 (419)
Q Consensus 271 ~~~pl~h~~g~~~-~l~~l~~G~~ivl~~~-----~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~ 344 (419)
+..|++|.+++.. ++.+|..|+++++.++ ++..+++.|+++++|+++++|++++.|.+..
T Consensus 279 ~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~-------------- 344 (628)
T TIGR02316 279 SASDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQD-------------- 344 (628)
T ss_pred EcCCCCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcC--------------
Confidence 9999999999865 7789999999999863 7899999999999999999999999875410
Q ss_pred HHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 345 FEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
....+..++ ++||.+++||+++++++.+++++.+|.++++.||+||
T Consensus 345 ---------------------~~~~~~~~l--------~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~~~yG~TE 390 (628)
T TIGR02316 345 ---------------------AAWLRKHDL--------SSLHWLFLAGEPLDEPTAHWITDGLGKPVIDNYWQTE 390 (628)
T ss_pred ---------------------CcccccCCc--------cceeEEEEecCCCCHHHHHHHHHHhCCCEEecccccc
Confidence 000112223 3899999999999999999999989999999999998
No 20
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=8.4e-39 Score=329.41 Aligned_cols=318 Identities=19% Similarity=0.300 Sum_probs=244.6
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHH
Q 014742 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (419)
Q Consensus 40 ~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~ 119 (419)
....++.+.|..+++.+|+++|+.+. + ..+.++.+||.||.++++++|++|.+.|+++||+|+++++|++++++++
T Consensus 36 ~~~~~l~~~l~~~a~~~p~~~a~~~~---~-~~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~ 111 (614)
T PRK08180 36 DYPRRLTDRLVHWAQEAPDRVFLAER---G-ADGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLA 111 (614)
T ss_pred CcCccHHHHHHHHHHHCCCCceeeec---c-CCCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHH
Confidence 34678999999999999999999864 2 2234578999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCeEEeeccCCC-----hhHHHHHHhhcCceEEEEeCCC-hhhHhhcCccCCCCccEEEEecCCChhhHHHHHH
Q 014742 120 EACNSQAITYVPLYDTLG-----ANAVEFIINHAEVSIAFVQENK-IPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEE 193 (419)
Q Consensus 120 lA~~~~G~~~vpl~~~~~-----~~~l~~~l~~~~~~~vi~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (419)
+||+++|++++|+++.++ .+++.++++.++++++|+++.. .......... ... .++..+....
T Consensus 112 lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~--~~~-~~i~~~~~~~-------- 180 (614)
T PRK08180 112 LAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAVVP--ADV-EVVAVRGAVP-------- 180 (614)
T ss_pred HHHHHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhcc--CCc-eEEEecCCCC--------
Confidence 999999999999999998 7999999999999999998642 2222221111 112 2333322110
Q ss_pred hCceeeeHHHHHhcCCC---CCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCC--CCcE
Q 014742 194 LGVSCFSWEEFLQLGTL---DCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCS--EEDT 268 (419)
Q Consensus 194 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~--~~d~ 268 (419)
.....+|+++...... ........++++++|+|||||||.||||++||+++..++......+ ... ..++
T Consensus 181 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~~~~~ 254 (614)
T PRK08180 181 -GRAATPFAALLATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTF-----PFLAEEPPV 254 (614)
T ss_pred -CcccccHHHHhccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhc-----cccCCCCcE
Confidence 0012345555443211 1111234578999999999999999999999999998887765544 332 5689
Q ss_pred EEEecChHHHHHHHH-HHHHHhcCceEEEeCC-----CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHH
Q 014742 269 YFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSK 342 (419)
Q Consensus 269 ~l~~~pl~h~~g~~~-~l~~l~~G~~ivl~~~-----~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~ 342 (419)
+++++|++|.+++.. ++.+++.|+++++.+. +...+++.++++++|+++++|.+++.|++.+++
T Consensus 255 ~l~~lPl~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~---------- 324 (614)
T PRK08180 255 LVDWLPWNHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALER---------- 324 (614)
T ss_pred EEEecchHHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHh----------
Confidence 999999999999875 7788999999999763 345778899999999999999999999764321
Q ss_pred HHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHh----hC--Cceeeecc
Q 014742 343 KLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVT----SG--APLTQGYG 416 (419)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~----~~--~~v~~~YG 416 (419)
.+.....++ ++||.+++||+++++++.+++++. +| +++++.||
T Consensus 325 -----------------------~~~~~~~~~--------~~lr~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG 373 (614)
T PRK08180 325 -----------------------DAALRRRFF--------SRLKLLFYAGAALSQDVWDRLDRVAEATCGERIRMMTGLG 373 (614)
T ss_pred -----------------------chhhhhhhc--------cceeEEEEccCCCCHHHHHHHHHHHHhhcCCCceeeeeec
Confidence 111122223 389999999999999999999875 33 68999999
Q ss_pred CCC
Q 014742 417 MVE 419 (419)
Q Consensus 417 ~tE 419 (419)
+||
T Consensus 374 ~TE 376 (614)
T PRK08180 374 MTE 376 (614)
T ss_pred ccc
Confidence 998
No 21
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=5.2e-39 Score=326.99 Aligned_cols=311 Identities=20% Similarity=0.226 Sum_probs=252.7
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHH
Q 014742 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (419)
Q Consensus 42 ~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA 121 (419)
..++.+.|...++.+|+++|+++. +...+.++.+||.||.++++++|++|.+.|+++|++|+++++|+++++++++|
T Consensus 23 ~~~l~~~l~~~a~~~p~~~A~~~~---~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~~la 99 (547)
T PRK13295 23 DRTINDDLDACVASCPDKTAVTAV---RLGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLYLA 99 (547)
T ss_pred CCCHHHHHHHHHHHCCCceEEEec---CCCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHH
Confidence 467999999999999999999875 43334457899999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCCh-----hhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCc
Q 014742 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI-----PSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGV 196 (419)
Q Consensus 122 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (419)
|+++|++++|+++.++.+++.++++.++++++++++... +.+.+ .......+..++.++...
T Consensus 100 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------------ 166 (547)
T PRK13295 100 CSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARR-LRPELPALRHVVVVGGDG------------ 166 (547)
T ss_pred HHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHH-HhhhCCCcceEEEecCCC------------
Confidence 999999999999999999999999999999999987541 11111 111223445565554321
Q ss_pred eeeeHHHHHhcC--------CCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcE
Q 014742 197 SCFSWEEFLQLG--------TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDT 268 (419)
Q Consensus 197 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~ 268 (419)
..++.++.... ..........++++++++|||||||.||+|+++|.++...+......+ ++..+++
T Consensus 167 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~ 240 (547)
T PRK13295 167 -ADSFEALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERL-----GLGADDV 240 (547)
T ss_pred -ccCHHHHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHh-----CCCCCCe
Confidence 12233332211 001112234568999999999999999999999999998888766655 7888999
Q ss_pred EEEecChHHHHHHHH-HHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHH
Q 014742 269 YFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFE 346 (419)
Q Consensus 269 ~l~~~pl~h~~g~~~-~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~ 346 (419)
+++.+|++|.+++.. ++.++..|+++++.+. ++..+++.++++++|++.++|.++..+......
T Consensus 241 ~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~-------------- 306 (547)
T PRK13295 241 ILMASPMAHQTGFMYGLMMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKE-------------- 306 (547)
T ss_pred EEEecCchhhhhHHHHHHHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccc--------------
Confidence 999999999999876 7889999999999877 999999999999999999999999988652110
Q ss_pred HHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 347 FAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
...++ ++||.+++||+++++++.+++++.++.++++.||+||
T Consensus 307 -----------------------~~~~~--------~~l~~~~~~G~~l~~~~~~~~~~~~~~~~~~~YG~TE 348 (547)
T PRK13295 307 -----------------------SGRPV--------SSLRTFLCAGAPIPGALVERARAALGAKIVSAWGMTE 348 (547)
T ss_pred -----------------------cCCCc--------ccceEEEEecCCCCHHHHHHHHHHhCCCeEEeccCCC
Confidence 00112 3899999999999999999999999999999999998
No 22
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.7e-39 Score=335.76 Aligned_cols=332 Identities=17% Similarity=0.201 Sum_probs=244.4
Q ss_pred CCCCCHHHHHHHHHHh--CCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHH
Q 014742 40 AGLESPWQFFCDSAKR--IPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWII 117 (419)
Q Consensus 40 ~~~~tl~~~l~~~a~~--~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~ 117 (419)
...++..++|+++++. +||++|+++. ..+.+..+.+||.||.++++++|+.|++.|+++||+|+++++|++++++
T Consensus 56 ~~~n~~~~~l~~~~~~~~~~~~~A~~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~ 132 (647)
T PTZ00237 56 GELNTCYNVLDIHVKNPLKRDQDALIYE---CPYLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLI 132 (647)
T ss_pred CeeeHHHHHHHHhhcccCCCCceEEEEE---cCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHH
Confidence 4566677888888764 7999999875 3223334789999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCC---------hhhHhhcCccCCCCccEEEEecCCCh--h
Q 014742 118 AMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK---------IPSILSCLPRCCLYLKTIVSFANVSS--S 186 (419)
Q Consensus 118 ~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 186 (419)
++|||+++|++++|+++.++.+++.++++.++++++|+++.. .+.+.++..........++....... .
T Consensus 133 ~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~ 212 (647)
T PTZ00237 133 AMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDITSE 212 (647)
T ss_pred HHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCcccc
Confidence 999999999999999999999999999999999999997631 12222221111011234444321100 0
Q ss_pred hHHH---HHHhCceeeeHHHHHhcC-----CCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechh-HHHHhhhhhhhhh
Q 014742 187 QKKE---AEELGVSCFSWEEFLQLG-----TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQA-IVAEVLSVDQMFV 257 (419)
Q Consensus 187 ~~~~---~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~-l~~~~~~~~~~~~ 257 (419)
.... ..........|++++... ..........++++++|+|||||||.||||+++|.+ +..........+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~- 291 (647)
T PTZ00237 213 SDLKKIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSII- 291 (647)
T ss_pred cccccccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhc-
Confidence 0000 000001123466665421 111223345678999999999999999999999998 444333222223
Q ss_pred hcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC---C----HHHHHHHhhhhcCeEEEecchHHHHHHHHH
Q 014742 258 VTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG---D----VRYLMEDIQELKPTMFSGVPRVYDRIYTGI 330 (419)
Q Consensus 258 ~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~---~----~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~ 330 (419)
....+|++++..|++|..++..++.+|+.|+++++.++ + +..+++.|+++++|++.++|++++.|++..
T Consensus 292 ----~~~~~d~~~~~~~~~w~~~~~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~ 367 (647)
T PTZ00237 292 ----EKDIPTVVFSHSSIGWVSFHGFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTD 367 (647)
T ss_pred ----CCCCCcEEEEcCCCceEeeHHHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhC
Confidence 56678999999999998776668889999999999865 2 678999999999999999999999986520
Q ss_pred HHHhhccCchHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCc
Q 014742 331 SNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAP 410 (419)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~ 410 (419)
.. ........+++ +||.+++||+++++++.+++++.+|++
T Consensus 368 ~~--------------------------------~~~~~~~~~l~--------~Lr~i~~~G~~l~~~~~~~~~~~~g~~ 407 (647)
T PTZ00237 368 PE--------------------------------ATIIRSKYDLS--------NLKEIWCGGEVIEESIPEYIENKLKIK 407 (647)
T ss_pred cc--------------------------------ccccccccCcc--------hheEEEecCccCCHHHHHHHHHhcCCC
Confidence 00 00001122333 899999999999999999999999999
Q ss_pred eeeeccCCC
Q 014742 411 LTQGYGMVE 419 (419)
Q Consensus 411 v~~~YG~tE 419 (419)
+++.||+||
T Consensus 408 i~~~yG~TE 416 (647)
T PTZ00237 408 SSRGYGQTE 416 (647)
T ss_pred EEeeechHH
Confidence 999999998
No 23
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=3e-39 Score=333.73 Aligned_cols=322 Identities=20% Similarity=0.281 Sum_probs=250.0
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHH
Q 014742 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (419)
Q Consensus 42 ~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA 121 (419)
.+...++|+++++.+|+++|+++. +.+.++.+.+||.||.++++++|++|++.|+++||+|+++++|+++++++++|
T Consensus 56 ~n~~~~~l~~~~~~~p~~~Al~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA 132 (625)
T TIGR02188 56 LNVSYNCVDRHLEARPDKVAIIWE---GDEPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLA 132 (625)
T ss_pred EEHHHHHHHHhhccCCCCeEEEEE---cCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 445677788888899999999976 43345567899999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCCh---------hhHhhcCccCCC-CccEEEEecCCChhhHHHH
Q 014742 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI---------PSILSCLPRCCL-YLKTIVSFANVSSSQKKEA 191 (419)
Q Consensus 122 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 191 (419)
|+++|++++|+++.++.+++.++++.++++++|+++... ..+.+... ..+ .++.+++++....... +.
T Consensus 133 ~~~~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~ 210 (625)
T TIGR02188 133 CARIGAIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALE-KCPVSVEHVLVVRRTGNPVP-WV 210 (625)
T ss_pred HHHhCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHH-hCCCCccEEEEEcCCCCCcC-cc
Confidence 999999999999999999999999999999999987532 11111111 112 3455665543221100 00
Q ss_pred HHhCceeeeHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhh-hhhhhhcCccCCCCcEEE
Q 014742 192 EELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSV-DQMFVVTGKVCSEEDTYF 270 (419)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~-~~~~~~~~~~~~~~d~~l 270 (419)
......|+++..............++++++|+|||||||.||||+++|++++...... ...+ ++.++|+++
T Consensus 211 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~-----~~~~~d~~~ 282 (625)
T TIGR02188 211 ---EGRDVWWHDLMAKASAYCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVF-----DIKDGDIFW 282 (625)
T ss_pred ---ccccccHHHHHhhcCCCCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhcc-----CCCCCcEEE
Confidence 0012345555544322223334567899999999999999999999999987554432 2223 778889999
Q ss_pred EecChHHHHHHHH-HHHHHhcCceEEEeCC-----CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHH
Q 014742 271 SFLPLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKL 344 (419)
Q Consensus 271 ~~~pl~h~~g~~~-~l~~l~~G~~ivl~~~-----~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~ 344 (419)
+..|++|..++.. ++.+|..|+++++.++ ++..+++.|+++++|++.++|++++.|.+...
T Consensus 283 ~~~~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~------------- 349 (625)
T TIGR02188 283 CTADVGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGD------------- 349 (625)
T ss_pred ECCCchhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCC-------------
Confidence 9999999998875 7789999999999753 78999999999999999999999999865210
Q ss_pred HHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhC---CceeeeccCCC
Q 014742 345 FEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG---APLTQGYGMVE 419 (419)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~---~~v~~~YG~tE 419 (419)
...+..++ ++||.+++||+++++++.+++.+.++ +++++.||+||
T Consensus 350 ----------------------~~~~~~~l--------~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE 397 (625)
T TIGR02188 350 ----------------------EWVKKHDL--------SSLRLLGSVGEPINPEAWMWYYKVVGKERCPIVDTWWQTE 397 (625)
T ss_pred ----------------------cccccCCc--------cceeEEEEecCCCCHHHHHHHHHHcCCCCCceEecccccc
Confidence 00111223 38999999999999999999999885 78999999998
No 24
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=7.7e-39 Score=330.46 Aligned_cols=326 Identities=21% Similarity=0.267 Sum_probs=253.4
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHH
Q 014742 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (419)
Q Consensus 40 ~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~ 119 (419)
....|+.++|.+.++.+|+++|+.+... ++.....+++||.||.+++.++|+.|++.|+++||+|+++++|++++++++
T Consensus 22 ~~~~t~~~~l~~~a~~~p~~~Al~~~~~-~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~ 100 (632)
T PRK07529 22 DLPASTYELLSRAAARHPDAPALSFLLD-ADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFAL 100 (632)
T ss_pred cCCCCHHHHHHHHHHHCCCCceEEeecc-cCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHH
Confidence 3466899999999999999999986411 111223468999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCCh-----hhHhhcCccCCCCccEEEEecCCChhh--HHHH-
Q 014742 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI-----PSILSCLPRCCLYLKTIVSFANVSSSQ--KKEA- 191 (419)
Q Consensus 120 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~- 191 (419)
|||+++| +++|+++.++.+++.++++.++++++|++.... +.+..... ..+.++.++.++...... ..+.
T Consensus 101 lA~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~ 178 (632)
T PRK07529 101 WGGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLA-ALPELRTVVEVDLARYLPGPKRLAV 178 (632)
T ss_pred HHHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHh-cCCcceeEEEecCcccccccccccc
Confidence 9999999 579999999999999999999999999986542 22222222 224555666654321100 0000
Q ss_pred ----HHhCceeeeHHHHHhcCCC--CCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCC
Q 014742 192 ----EELGVSCFSWEEFLQLGTL--DCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSE 265 (419)
Q Consensus 192 ----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~ 265 (419)
......+..+.+.+..... ........++++++++|||||||.||+|.+||++++.++......+ ...+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~-----~~~~ 253 (632)
T PRK07529 179 PLIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLL-----GLGP 253 (632)
T ss_pred cccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhc-----CCCC
Confidence 0011123455555544311 1122234678999999999999999999999999998887766655 6788
Q ss_pred CcEEEEecChHHHHHHHH-HHHHHhcCceEEEeCC----C---HHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhcc
Q 014742 266 EDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG----D---VRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSG 337 (419)
Q Consensus 266 ~d~~l~~~pl~h~~g~~~-~l~~l~~G~~ivl~~~----~---~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~ 337 (419)
+|++++.+|++|.+++.. ++.++..|+++++.+. + ...+++.++++++|++.++|+++..+++.
T Consensus 254 ~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~-------- 325 (632)
T PRK07529 254 GDTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQV-------- 325 (632)
T ss_pred CCEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhC--------
Confidence 999999999999999886 7889999999999753 2 36788999999999999999999998651
Q ss_pred CchHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccC
Q 014742 338 GALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGM 417 (419)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~ 417 (419)
+ .+..++ ++||.+++||+++++++.++|++.+|+++++.||+
T Consensus 326 -----------------------------~-~~~~~~--------~slr~v~~gg~~l~~~l~~~~~~~~g~~l~~~YG~ 367 (632)
T PRK07529 326 -----------------------------P-VDGHDI--------SSLRYALCGAAPLPVEVFRRFEAATGVRIVEGYGL 367 (632)
T ss_pred -----------------------------c-ccCCCc--------cceEEEEEcCCCCCHHHHHHHHHHhCCcEeeeecc
Confidence 0 001122 38999999999999999999999999999999999
Q ss_pred CC
Q 014742 418 VE 419 (419)
Q Consensus 418 tE 419 (419)
||
T Consensus 368 TE 369 (632)
T PRK07529 368 TE 369 (632)
T ss_pred cc
Confidence 98
No 25
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.4e-38 Score=326.57 Aligned_cols=319 Identities=19% Similarity=0.303 Sum_probs=243.5
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHH
Q 014742 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (419)
Q Consensus 40 ~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~ 119 (419)
....++.+.|..+++.+||++++++. +...+.++.+||+||.++++++|++|++.|+++||+|+++++|++++++++
T Consensus 46 ~~~~~l~~~l~~~a~~~pd~~a~~~~---~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~ 122 (624)
T PRK12582 46 PYPRSIPHLLAKWAAEAPDRPWLAQR---EPGHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMT 122 (624)
T ss_pred CcccCHHHHHHHHHHHCCCchheecc---cCCCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHH
Confidence 34678999999999999999999864 332345678999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCeEEeeccCCCh-----hHHHHHHhhcCceEEEEeCCC-hhhHhhcCccCCCCccEEEEecCCChhhHHHHHH
Q 014742 120 EACNSQAITYVPLYDTLGA-----NAVEFIINHAEVSIAFVQENK-IPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEE 193 (419)
Q Consensus 120 lA~~~~G~~~vpl~~~~~~-----~~l~~~l~~~~~~~vi~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (419)
+||+++|++++|+++.++. +++.++++.++++++|+++.. .......... ... .++.++....
T Consensus 123 lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~--~~~-~~i~~~~~~~-------- 191 (624)
T PRK12582 123 LAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDL--LDV-TVVHVTGPGE-------- 191 (624)
T ss_pred HHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhh--cCc-eEEEEcCCCc--------
Confidence 9999999999999999885 899999999999999998642 2222222211 112 2333332210
Q ss_pred hCceeeeHHHHHhcCCCC---CCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCC---CCc
Q 014742 194 LGVSCFSWEEFLQLGTLD---CELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCS---EED 267 (419)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~---~~d 267 (419)
......+.++....... .......++++++|+|||||||.||||++||+++..++....... ... ..+
T Consensus 192 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~-----~~~~~~~~~ 265 (624)
T PRK12582 192 -GIASIAFADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLR-----PREPDPPPP 265 (624)
T ss_pred -ccccccHHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhc-----cccCCCCCc
Confidence 00123455554332111 111234578999999999999999999999999998776654433 222 257
Q ss_pred EEEEecChHHHHHHHH-HHHHHhcCceEEEeCC--C---HHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchH
Q 014742 268 TYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--D---VRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALS 341 (419)
Q Consensus 268 ~~l~~~pl~h~~g~~~-~l~~l~~G~~ivl~~~--~---~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~ 341 (419)
++++++|++|.+|+.. ++.++..|+++++.+. + ...+++.++++++|++.++|.+++.|++.+..
T Consensus 266 ~~l~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~--------- 336 (624)
T PRK12582 266 VSLDWMPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEK--------- 336 (624)
T ss_pred eEEEechHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhh---------
Confidence 9999999999999876 6678999999999763 3 34567788999999999999999988753221
Q ss_pred HHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhh------CCceeeec
Q 014742 342 KKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS------GAPLTQGY 415 (419)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~------~~~v~~~Y 415 (419)
.+.....+++ +||.+++||+++++++.++|++.+ +++++++|
T Consensus 337 ------------------------~~~~~~~~~~--------slr~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~Y 384 (624)
T PRK12582 337 ------------------------DDALRRSFFK--------NLRLMAYGGATLSDDLYERMQALAVRTTGHRIPFYTGY 384 (624)
T ss_pred ------------------------CHHHHHHHhh--------heeEEEecCCCCCHHHHHHHHHHHHhhcCCCceEEecc
Confidence 1222233343 899999999999999999999863 36899999
Q ss_pred cCCC
Q 014742 416 GMVE 419 (419)
Q Consensus 416 G~tE 419 (419)
|+||
T Consensus 385 G~TE 388 (624)
T PRK12582 385 GATE 388 (624)
T ss_pred cccc
Confidence 9998
No 26
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=4.9e-39 Score=326.18 Aligned_cols=305 Identities=20% Similarity=0.215 Sum_probs=241.1
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHH
Q 014742 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (419)
Q Consensus 42 ~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA 121 (419)
..++.+.|.+.++.+|+++++.+. +. ..+||.||.++++++|+.|.+ .+||+|+++++|+++++++++|
T Consensus 18 ~~~~~~~~~~~~~~~p~~~a~~~~---~~-----~~~Ty~el~~~~~~lA~~L~~---~~gd~Val~~~n~~e~~~~~lA 86 (539)
T PRK06334 18 GKTVLESFLKLCSEMTTATVCWDE---QL-----GKLSYNQVRKAVIALATKVSK---YPDQHIGIMMPASAGAYIAYFA 86 (539)
T ss_pred CCcHHHHHHHHHHhCCCceEEEeC---CC-----CcccHHHHHHHHHHHHHHHhh---ccCCeEEEEcCCchHHHHHHHH
Confidence 578999999999999999998754 32 379999999999999999987 3899999999999999999999
Q ss_pred HHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeH
Q 014742 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (419)
Q Consensus 122 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (419)
|+++|++++|+++.++.+++.++++.++++++|++.+....+.+...........++..++.... ..+
T Consensus 87 ~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------------~~~ 154 (539)
T PRK06334 87 TLLSGKIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEVRKE------------LSF 154 (539)
T ss_pred HHhcCCeeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehhhhh------------ccH
Confidence 99999999999999999999999999999999998765554432211100011123333321100 000
Q ss_pred HHHHh------cCC----CCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEE
Q 014742 202 EEFLQ------LGT----LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFS 271 (419)
Q Consensus 202 ~~~~~------~~~----~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~ 271 (419)
.+... ... .........++++++|+|||||||.||||++||+++..+.......+ +...+|++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~-----~~~~~d~~l~ 229 (539)
T PRK06334 155 WEKCRIGIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFF-----SPKEDDVMMS 229 (539)
T ss_pred HHhhhhhhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhc-----CCCCCceEEE
Confidence 00000 000 00112234678999999999999999999999999998877765555 7788999999
Q ss_pred ecChHHHHHHHH-HHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHH
Q 014742 272 FLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFA 348 (419)
Q Consensus 272 ~~pl~h~~g~~~-~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 348 (419)
.+|++|.+++.. ++.++..|+++++... ++..+++.|+++++|++.++|.+++.|++...
T Consensus 230 ~~p~~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~----------------- 292 (539)
T PRK06334 230 FLPPFHAYGFNSCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAK----------------- 292 (539)
T ss_pred ecchHhhhhhHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhh-----------------
Confidence 999999999975 7788999999998753 99999999999999999999999999875311
Q ss_pred HHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhh-CCceeeeccCCC
Q 014742 349 YNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGMVE 419 (419)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~tE 419 (419)
....++ ++||.+++||+++++++.+++++.+ ++++++.||+||
T Consensus 293 --------------------~~~~~~--------~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE 336 (539)
T PRK06334 293 --------------------KQESCL--------PSLRFVVIGGDAFKDSLYQEALKTFPHIQLRQGYGTTE 336 (539)
T ss_pred --------------------hccccc--------ccccEEEECCccCCHHHHHHHHHHCCCCeEEecccccc
Confidence 111112 3899999999999999999999988 789999999998
No 27
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=3.6e-38 Score=320.12 Aligned_cols=329 Identities=21% Similarity=0.285 Sum_probs=261.6
Q ss_pred CCCCcceecCccCCCCCCCCCCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCC
Q 014742 20 PSGGPVYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGV 99 (419)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~ 99 (419)
.+++-+||+-.+....| ...++.+.+..+++.+|+++|+++. +.. +.+||.||.++++++|+.|.+.|+
T Consensus 4 ~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~a~~~~---~~~----~~~ty~el~~~~~~la~~L~~~g~ 72 (537)
T PLN02246 4 ASEEFIFRSKLPDIYIP----NHLPLHDYCFERLSEFSDRPCLIDG---ATG----RVYTYADVELLSRRVAAGLHKLGI 72 (537)
T ss_pred ccceeEecCCCCCCCCC----CCCcHHHHHHHHHHhCCCCeEEEec---CCC----ceeeHHHHHHHHHHHHHHHHHhCC
Confidence 45667788887654332 2568999999999999999999864 211 579999999999999999999999
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEE
Q 014742 100 NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVS 179 (419)
Q Consensus 100 ~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (419)
++||+|+++++|+++++++++||+++|++++|+++.++.+++..+++.++++++|++....+.+...... ..+ .++.
T Consensus 73 ~~gd~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~--~~~-~~i~ 149 (537)
T PLN02246 73 RQGDVVMLLLPNCPEFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAED--DGV-TVVT 149 (537)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhc--CCc-eEEE
Confidence 9999999999999999999999999999999999999999999999999999999998776655433211 112 3444
Q ss_pred ecCCChhhHHHHHHhCceeeeHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhc
Q 014742 180 FANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVT 259 (419)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~ 259 (419)
+++... ....+.++........+.....++++++++|||||||.||||+++|+++...+....... ..
T Consensus 150 ~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~-~~ 217 (537)
T PLN02246 150 IDDPPE-----------GCLHFSELTQADENELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGE-NP 217 (537)
T ss_pred eCCCCC-----------CceeHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhcc-cc
Confidence 443211 123455554333222233345678999999999999999999999999988766533210 01
Q ss_pred CccCCCCcEEEEecChHHHHHHHH-HHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhcc
Q 014742 260 GKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSG 337 (419)
Q Consensus 260 ~~~~~~~d~~l~~~pl~h~~g~~~-~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~ 337 (419)
...+..+|++++.+|++|.+++.. ++.++..|+++++.+. ++..+++.|+++++|++.++|.++..|.+.
T Consensus 218 ~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~-------- 289 (537)
T PLN02246 218 NLYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKS-------- 289 (537)
T ss_pred ccCCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcC--------
Confidence 236788999999999999999876 6788999999999987 999999999999999999999999887641
Q ss_pred CchHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhh-CCceeeecc
Q 014742 338 GALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYG 416 (419)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~-~~~v~~~YG 416 (419)
+......+ +++|.+++||+++++++.+.+++.+ +..+++.||
T Consensus 290 -----------------------------~~~~~~~~--------~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~YG 332 (537)
T PLN02246 290 -----------------------------PVVEKYDL--------SSIRMVLSGAAPLGKELEDAFRAKLPNAVLGQGYG 332 (537)
T ss_pred -----------------------------ccccccCc--------cceeEEEEecCcCCHHHHHHHHHHcCCCeEecccc
Confidence 11111122 2899999999999999999999988 778999999
Q ss_pred CCC
Q 014742 417 MVE 419 (419)
Q Consensus 417 ~tE 419 (419)
+||
T Consensus 333 ~tE 335 (537)
T PLN02246 333 MTE 335 (537)
T ss_pred ccc
Confidence 998
No 28
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=2.9e-38 Score=329.01 Aligned_cols=316 Identities=16% Similarity=0.201 Sum_probs=242.1
Q ss_pred CCCHHH-HHHHHHHhCCCCCceeeeeccCCC--CCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHH
Q 014742 42 LESPWQ-FFCDSAKRIPNNQMLGGRKVSDGK--VGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIA 118 (419)
Q Consensus 42 ~~tl~~-~l~~~a~~~pd~~ai~~~~~~~~~--~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~ 118 (419)
..++.+ +|++++..+|+++|+++. +.. +.+.+++||.||.++++++|+.|++.|+++||+|+++++|+++++++
T Consensus 173 ~ln~~~~~l~~~~~~~pd~~Ai~~~---~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~via 249 (728)
T PLN03052 173 VLNVAECCLTPKPSKTDDSIAIIWR---DEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVII 249 (728)
T ss_pred EeEHHHHHHHHHhccCCCCeEEEEE---CCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHH
Confidence 344444 566666678999999986 321 23467899999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCCh---------hhHhhcCccCCCCccEEEEecCCChhhHH
Q 014742 119 MEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI---------PSILSCLPRCCLYLKTIVSFANVSSSQKK 189 (419)
Q Consensus 119 ~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (419)
++||+++|++++|+++.++.+++.++++.++++++|+++... ..+.... . +.++++........
T Consensus 250 ~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~----~--~~~iv~~~~~~~~~- 322 (728)
T PLN03052 250 YLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAK----A--PKAIVLPADGKSVR- 322 (728)
T ss_pred HHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhc----C--CcEEEEeCCCCccc-
Confidence 999999999999999999999999999999999999987532 1111111 1 22333322110000
Q ss_pred HHHHhCceeeeHHHHHhcCC-----CCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCC
Q 014742 190 EAEELGVSCFSWEEFLQLGT-----LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCS 264 (419)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~ 264 (419)
.........|+++..... .........++++++|+|||||||.||||+++|.+++..+......+ +++
T Consensus 323 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~-----~l~ 395 (728)
T PLN03052 323 --VKLREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHL-----DIR 395 (728)
T ss_pred --cccccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhc-----CCC
Confidence 000001245777654321 01111123468999999999999999999999999877665543333 778
Q ss_pred CCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHH
Q 014742 265 EEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSK 342 (419)
Q Consensus 265 ~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~ 342 (419)
++|++++..+++|+++...++.+|..|+++++.++ +...+++.++++++|++.++|++++.+.+.
T Consensus 396 ~~d~~~~~~~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~------------- 462 (728)
T PLN03052 396 KGDIVCWPTNLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNT------------- 462 (728)
T ss_pred CCcEEEECCCcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhc-------------
Confidence 89999999999999998777899999999999976 667899999999999999999999987541
Q ss_pred HHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhC-CceeeeccCCC
Q 014742 343 KLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG-APLTQGYGMVE 419 (419)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~-~~v~~~YG~tE 419 (419)
...+..+++ +||.+++||++++++...++.+.++ .++.+.||+||
T Consensus 463 ------------------------~~~~~~dls--------sLr~i~s~Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE 508 (728)
T PLN03052 463 ------------------------NCMAGLDWS--------SIRCFGSTGEASSVDDYLWLMSRAGYKPIIEYCGGTE 508 (728)
T ss_pred ------------------------CCcccCChh--------heeEEEecCCCCCHHHHHHHHHhcCCCCeEeeccChh
Confidence 111223444 8999999999999999988888776 57999999998
No 29
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=4e-38 Score=325.96 Aligned_cols=319 Identities=20% Similarity=0.288 Sum_probs=246.7
Q ss_pred HHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHH
Q 014742 45 PWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNS 124 (419)
Q Consensus 45 l~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~ 124 (419)
..++|+++++.+|+++|+++. +.+.+..+.+||.||.++++++|++|++.|+++||+|+++++|+++++++++||++
T Consensus 69 ~~~~l~~~~~~~p~~~Al~~~---~~~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~ 145 (637)
T PRK00174 69 SYNCLDRHLKTRGDKVAIIWE---GDDPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACAR 145 (637)
T ss_pred HHHHHHHhhccCCCCeEEEEE---CCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 456788888899999999975 33333457899999999999999999999999999999999999999999999999
Q ss_pred cCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCCh---------hhHhhcCccCCCCccEEEEecCCChhhHHHHHHhC
Q 014742 125 QAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI---------PSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELG 195 (419)
Q Consensus 125 ~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (419)
+|++++|+++.++.+++.++++.++++++|+++... +.+.+... ..+..+.+++.+....... . ..
T Consensus 146 ~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~---~~ 220 (637)
T PRK00174 146 IGAVHSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALA-NCPSVEKVIVVRRTGGDVD-W---VE 220 (637)
T ss_pred cCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHH-hCCCccEEEEEcCCCCCcC-c---CC
Confidence 999999999999999999999999999999987542 11111111 1234455655543221000 0 00
Q ss_pred ceeeeHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhh-hhhhhhcCccCCCCcEEEEecC
Q 014742 196 VSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSV-DQMFVVTGKVCSEEDTYFSFLP 274 (419)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~-~~~~~~~~~~~~~~d~~l~~~p 274 (419)
.....|+++..............++++++|+|||||||.||||+++|++++.+.... ...+ ++..+|++++..|
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~-----~~~~~d~~~~~~~ 295 (637)
T PRK00174 221 GRDLWWHELVAGASDECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVF-----DYKDGDVYWCTAD 295 (637)
T ss_pred CCcccHHHHHhhcCCCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhcc-----CCCCCcEEEEcCC
Confidence 012345555543322223334567899999999999999999999999987654332 2223 6778899999999
Q ss_pred hHHHHHHHH-HHHHHhcCceEEEeCC-----CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHH
Q 014742 275 LAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFA 348 (419)
Q Consensus 275 l~h~~g~~~-~l~~l~~G~~ivl~~~-----~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 348 (419)
++|..++.. ++.+|..|+++++.++ ++..+++.|+++++|++.++|++++.|++...
T Consensus 296 ~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~----------------- 358 (637)
T PRK00174 296 VGWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGD----------------- 358 (637)
T ss_pred chHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCC-----------------
Confidence 999999875 7889999999999753 78999999999999999999999998865210
Q ss_pred HHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhC---CceeeeccCCC
Q 014742 349 YNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG---APLTQGYGMVE 419 (419)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~---~~v~~~YG~tE 419 (419)
...+..++ ++||.+++||+++++++.+++.+.++ +++++.||+||
T Consensus 359 ------------------~~~~~~~~--------~~lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~YG~TE 406 (637)
T PRK00174 359 ------------------EHPKKYDL--------SSLRLLGSVGEPINPEAWEWYYKVVGGERCPIVDTWWQTE 406 (637)
T ss_pred ------------------cccccCCc--------cceeEEEEeCCCCCHHHHHHHHHHhCCCCCceEecccccc
Confidence 00111122 38999999999999999999999886 78999999998
No 30
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.5e-38 Score=320.90 Aligned_cols=318 Identities=21% Similarity=0.301 Sum_probs=256.2
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhC-CCCCCCeEEEEcCCchhHHHH
Q 014742 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSR-GVNPGDRCGIYGSNCPEWIIA 118 (419)
Q Consensus 40 ~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~-g~~~gd~V~l~~~n~~~~~~~ 118 (419)
.+..++.+.|...+..+|+++|+++. + +.+||.||.+++.+++..|.+. |+++||+|+++++|+++++++
T Consensus 7 ~~~~tl~~~l~~~a~~~~~~~a~~~~---~------~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~ 77 (546)
T PRK08314 7 LPETSLFHNLEVSARRYPDKTAIVFY---G------RAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIA 77 (546)
T ss_pred CCCCCHHHHHHHHHHHcCCCcceeec---C------ceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHH
Confidence 45678999999999999999999975 3 4799999999999999999998 999999999999999999999
Q ss_pred HHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhH-------HHH
Q 014742 119 MEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQK-------KEA 191 (419)
Q Consensus 119 ~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 191 (419)
++||+++|++++|+++.++.+++.++++.++++++|++.+....+....... .++.+++.+....... .+.
T Consensus 78 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (546)
T PRK08314 78 YYAILRANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNL--RLRHVIVAQYSDYLPAEPEIAVPAWL 155 (546)
T ss_pred HHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhcc--CcceEEEecchhhcccccccCccccc
Confidence 9999999999999999999999999999999999999988766654433221 2333333221100000 000
Q ss_pred -------HHhCceeeeHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCC
Q 014742 192 -------EELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCS 264 (419)
Q Consensus 192 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~ 264 (419)
.-.......|++...... ........++++++++|||||||.||+|.++|++++.++......+ ...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~ 229 (546)
T PRK08314 156 RAEPPLQALAPGGVVAWKEALAAGL-APPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWS-----NST 229 (546)
T ss_pred ccccccccccccccccHHHHhcccC-CCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhh-----CCC
Confidence 000112345665554321 1223345678999999999999999999999999999888766655 778
Q ss_pred CCcEEEEecChHHHHHHHH-HHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHH
Q 014742 265 EEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSK 342 (419)
Q Consensus 265 ~~d~~l~~~pl~h~~g~~~-~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~ 342 (419)
.+|++++.+|++|.+|+.. ++.++..|+++++.+. ++..+++.++++++|++.++|.++..++..
T Consensus 230 ~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~------------- 296 (546)
T PRK08314 230 PESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLAS------------- 296 (546)
T ss_pred CCceEEEEcCchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhC-------------
Confidence 8999999999999999876 7788999999999987 999999999999999999999999887641
Q ss_pred HHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 343 KLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
+..+..+++ ++|.+++||+++++++.+++.+.++.++++.||+||
T Consensus 297 ------------------------~~~~~~~~~--------~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE 341 (546)
T PRK08314 297 ------------------------PGLAERDLS--------SLRYIGGGGAAMPEAVAERLKELTGLDYVEGYGLTE 341 (546)
T ss_pred ------------------------CCccccCch--------hhheeeeccccCCHHHHHHHHHHcCCcEEecccccc
Confidence 111222232 789999999999999999999999999999999998
No 31
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.1e-38 Score=326.45 Aligned_cols=323 Identities=17% Similarity=0.206 Sum_probs=246.5
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHH
Q 014742 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (419)
Q Consensus 42 ~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA 121 (419)
.+...++|+++++.+|+++|+++. +.+++..+.+||.||.++++++|++|++.|+++||+|+++++|+++++++++|
T Consensus 52 ~n~~~~~l~~~~~~~p~~~A~~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA 128 (629)
T PRK10524 52 TNLCHNAVDRHLAKRPEQLALIAV---STETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLA 128 (629)
T ss_pred eeHHHHHHHHhhccCCCCeEEEEE---cCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 334577788888889999999875 43334457899999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCCh---------hhHhhcCccCCCCccEEEEecCCChhhHHHHH
Q 014742 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI---------PSILSCLPRCCLYLKTIVSFANVSSSQKKEAE 192 (419)
Q Consensus 122 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (419)
|+++|++++|+++.++.+++...++.++++++|+++... +.+.+...........+++++.......
T Consensus 129 ~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~---- 204 (629)
T PRK10524 129 CARIGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAPMA---- 204 (629)
T ss_pred HHHhCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCcC----
Confidence 999999999999999999999999999999999976421 2222221111123345555543211000
Q ss_pred HhCceeeeHHHHHhcC-CCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhh-hhhhhhhcCccCCCCcEEE
Q 014742 193 ELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLS-VDQMFVVTGKVCSEEDTYF 270 (419)
Q Consensus 193 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~-~~~~~~~~~~~~~~~d~~l 270 (419)
........|.++.... ....+.....++++++++|||||||.||||+++|.++...... ....+ ++.++|+++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~-----~~~~~d~~~ 279 (629)
T PRK10524 205 RVAGRDVDYATLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIF-----GGKAGETFF 279 (629)
T ss_pred cccCCcccHHHHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhc-----CCCCCCEEE
Confidence 0000123455554332 1112222345789999999999999999999999997644433 23333 677889999
Q ss_pred EecChHHHHHHHH-HHHHHhcCceEEEeCC-----CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHH
Q 014742 271 SFLPLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKL 344 (419)
Q Consensus 271 ~~~pl~h~~g~~~-~l~~l~~G~~ivl~~~-----~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~ 344 (419)
+..|++|.+++.. ++.++..|+++++.++ ++..+++.|+++++|++.++|++++.+.+.-
T Consensus 280 ~~~~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~-------------- 345 (629)
T PRK10524 280 CASDIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQD-------------- 345 (629)
T ss_pred EcCCCCeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcC--------------
Confidence 9999999988765 7788999999999763 7899999999999999999999998875410
Q ss_pred HHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 345 FEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
....+..+++ +||.+++||+++++++.+++++.++.++++.||+||
T Consensus 346 ---------------------~~~~~~~~l~--------~lr~i~~~Ge~l~~~~~~~~~~~~~~~v~~~YG~TE 391 (629)
T PRK10524 346 ---------------------PALLRKHDLS--------SLRALFLAGEPLDEPTASWISEALGVPVIDNYWQTE 391 (629)
T ss_pred ---------------------cccccccChh--------heeEEEEeCCCCCHHHHHHHHHhcCCCeEecccccc
Confidence 0001122233 899999999999999999999999999999999998
No 32
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.6e-38 Score=315.58 Aligned_cols=314 Identities=22% Similarity=0.339 Sum_probs=260.1
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHH
Q 014742 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (419)
Q Consensus 40 ~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~ 119 (419)
.+..++.+.|...++.+|+++|+.+. + +++||.||++.+.++|+.|.+.|+++||+|+++++|++++++++
T Consensus 2 ~~~~~i~~~l~~~~~~~~~~~a~~~~----~-----~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~ 72 (513)
T PRK07656 2 NEWMTLPELLARAARRFGDKEAYVFG----D-----QRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAA 72 (513)
T ss_pred CccccHHHHHHHHHHHCCCCeEEEeC----C-----CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHH
Confidence 35688999999999999999999874 3 47999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceee
Q 014742 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (419)
Q Consensus 120 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (419)
+||+++|++++|+++..+.+++..+++.+++++++++........... ......+.++......... ......
T Consensus 73 la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~~ 145 (513)
T PRK07656 73 LGALKAGAVVVPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSAT-TRLPALEHVVICETEEDDP------HTEKMK 145 (513)
T ss_pred HHHHhcCeEEEecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHH-hccCCccEEEEEcCccccc------Cccccc
Confidence 999999999999999999999999999999999999987665543332 2223445555444332110 001234
Q ss_pred eHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHH
Q 014742 200 SWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (419)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~ 279 (419)
+|+++..............++++++++|||||||.||+|.++|.++...+......+ ++..+|++++.+|++|.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 220 (513)
T PRK07656 146 TFTDFLAAGDPAERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYL-----GLTEGDRYLAANPFFHVF 220 (513)
T ss_pred cHHHHHhcCCCCCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhh-----CCCCCCeEEEccchHHHH
Confidence 567776544322333445778999999999999999999999999998888766666 788899999999999999
Q ss_pred HHHH-HHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhc
Q 014742 280 DQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (419)
Q Consensus 280 g~~~-~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (419)
++.. ++.++..|+++++.+. ++..+++.|+++++|++.++|.++..+.+...
T Consensus 221 ~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~-------------------------- 274 (513)
T PRK07656 221 GYKAGVNAPLMRGATILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPD-------------------------- 274 (513)
T ss_pred HHHHHHHHHHHcCceEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCC--------------------------
Confidence 9886 7888999999998876 99999999999999999999999999865211
Q ss_pred cCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCC-ceeeeccCCC
Q 014742 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGA-PLTQGYGMVE 419 (419)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~-~v~~~YG~tE 419 (419)
.....+ +++|.+++||+++++++.+++++.++. ++++.||+||
T Consensus 275 -----------~~~~~~--------~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~YG~tE 318 (513)
T PRK07656 275 -----------RSAEDL--------SSLRLAVTGAASMPVALLERFESELGVDIVLTGYGLSE 318 (513)
T ss_pred -----------cCCCCc--------cceeeEEecCCCCCHHHHHHHHHHcCCCceEeEEcccc
Confidence 011112 389999999999999999999999998 8999999998
No 33
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=2.9e-38 Score=297.96 Aligned_cols=312 Identities=16% Similarity=0.179 Sum_probs=256.5
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHH
Q 014742 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (419)
Q Consensus 40 ~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~ 119 (419)
-...++.+++...++++|+++|+++. +.. +.+||.|+.+.++++|+.|...|++.||.|+++|+|.++|+.++
T Consensus 74 r~~~ti~~~F~~~vrr~p~k~aii~~---~~~----~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lW 146 (649)
T KOG1179|consen 74 RERRTIAELFLSQVRRQPDKPAIIYE---GPF----QSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALW 146 (649)
T ss_pred ccCCcHHHHHHHHHHhCCCccEEEEe---CCC----ceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHH
Confidence 45789999999999999999999987 432 58999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceee
Q 014742 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (419)
Q Consensus 120 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (419)
+|++++|++...||+++..+.|.|.++.++++.+|++.+..+.+.+.........-.++..+..... .+..
T Consensus 147 lGLaKlGv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~~~~~~---------~g~~ 217 (649)
T KOG1179|consen 147 LGLAKLGVITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLGPTSVP---------DGIE 217 (649)
T ss_pred HhHHhhCceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecCCCCCC---------chHH
Confidence 9999999999999999999999999999999999999998887766633222222223333222211 1122
Q ss_pred eHHHHHhcC-CCC---CCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecCh
Q 014742 200 SWEEFLQLG-TLD---CELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPL 275 (419)
Q Consensus 200 ~~~~~~~~~-~~~---~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl 275 (419)
++.+.++.. ..+ .......-.++++.+|||||||.||+.+++|..+...+..+...+ +++++|+++..+|+
T Consensus 218 ~L~~~l~~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~-----g~~~~DvvY~~lPL 292 (649)
T KOG1179|consen 218 SLLAKLSAAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVF-----GMTADDVVYTTLPL 292 (649)
T ss_pred HHHHhhcccccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHh-----CCCccceEEEcchh
Confidence 333333333 112 112334456899999999999999999999999998888776766 99999999999999
Q ss_pred HHHHHHHH-HHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhh
Q 014742 276 AHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKL 353 (419)
Q Consensus 276 ~h~~g~~~-~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (419)
+|+.|.+. +..++..|+|+++-.+ +...+|+...+|++|++..+-.+.+.|+++
T Consensus 293 YHsaa~ilGi~~~l~~GaT~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~------------------------ 348 (649)
T KOG1179|consen 293 YHSAAGILGIGGCLLHGATVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQ------------------------ 348 (649)
T ss_pred HHHHHHHHHHHHHHhcCceEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcC------------------------
Confidence 99999988 7789999999999887 999999999999999999999998888762
Q ss_pred hhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCc-eeeeccCCC
Q 014742 354 GNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAP-LTQGYGMVE 419 (419)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~-v~~~YG~tE 419 (419)
+..+.-+. |++|.++ |..+.+++++.|.++||.. |.+.||+||
T Consensus 349 ----------p~~~~er~-----------HkVRla~--GNGLR~diW~~Fv~RFg~~~IgE~YgaTE 392 (649)
T KOG1179|consen 349 ----------PPSPEERQ-----------HKVRLAY--GNGLRPDIWQQFVKRFGIIKIGEFYGATE 392 (649)
T ss_pred ----------CCChhhcC-----------ceEEEEe--cCCCCchHHHHHHHHcCCCeEEEEecccc
Confidence 11221111 6888877 8899999999999999876 999999998
No 34
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.6e-38 Score=317.23 Aligned_cols=306 Identities=18% Similarity=0.190 Sum_probs=247.9
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHH
Q 014742 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (419)
Q Consensus 42 ~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA 121 (419)
..++.+.|...++.+||++|+.+. + ..+||.||.++++++|++|.+.|+++|++|+++++|++++++.++|
T Consensus 42 ~~~~~~~l~~~a~~~p~~~a~~~~---~------~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA 112 (537)
T PRK13382 42 GMGPTSGFAIAAQRCPDRPGLIDE---L------GTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLA 112 (537)
T ss_pred cCCHHHHHHHHHHhCCCCeEEEeC---C------CeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHH
Confidence 367999999999999999999864 2 4799999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeH
Q 014742 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (419)
Q Consensus 122 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (419)
|+++|++++|+++.++.+++.++++.++++++|++......+...... ......++..++... ...+
T Consensus 113 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------------~~~~ 179 (537)
T PRK13382 113 ANRIGADILLLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALAD-CPQATRIVAWTDEDH------------DLTV 179 (537)
T ss_pred HHHcCcEEEecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhh-ccccceEEEecCCcc------------cccH
Confidence 999999999999999999999999999999999998766554333221 122223333322110 1233
Q ss_pred HHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHH
Q 014742 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (419)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~ 281 (419)
+.+....... .....+++.++++|||||||.||||+++|.++..........+ .+..++++++..|++|.+++
T Consensus 180 ~~~~~~~~~~--~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~~~~l~~~p~~~~~g~ 252 (537)
T PRK13382 180 EVLIAAHAGQ--RPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRT-----PWRAEEPTVIVAPMFHAWGF 252 (537)
T ss_pred HHHhhccCcC--CCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhh-----CCCCCCeEEEecChHhhhHH
Confidence 4443322111 1122467889999999999999999999999988777765555 67788999999999999999
Q ss_pred HHHHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccCC
Q 014742 282 IIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGM 360 (419)
Q Consensus 282 ~~~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (419)
..++.++..|+++++.+. +++.+++.|+++++|++.++|.+++.+++....
T Consensus 253 ~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~---------------------------- 304 (537)
T PRK13382 253 SQLVLAASLACTIVTRRRFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAE---------------------------- 304 (537)
T ss_pred HHHHHHHhcCcEEEECCCcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCch----------------------------
Confidence 778888999999998766 999999999999999999999999998652100
Q ss_pred CCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 361 PQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 361 ~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
..+..++ .++|.+++||+++++++++.|.+.+|.++++.||+||
T Consensus 305 -------~~~~~~~--------~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~TE 348 (537)
T PRK13382 305 -------VRNRYSG--------RSLRFAAASGSRMRPDVVIAFMDQFGDVIYNNYNATE 348 (537)
T ss_pred -------hcccCCc--------cceeEEEEcCCCCCHHHHHHHHHHcCCcEEecccccc
Confidence 0111112 2899999999999999999999999999999999998
No 35
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.3e-37 Score=318.57 Aligned_cols=326 Identities=19% Similarity=0.276 Sum_probs=257.2
Q ss_pred CCCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHh-CCCCCCCeEEEEcCCchhHHH
Q 014742 39 PAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRS-RGVNPGDRCGIYGSNCPEWII 117 (419)
Q Consensus 39 ~~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~-~g~~~gd~V~l~~~n~~~~~~ 117 (419)
.....|+.++|+.++..+|+++|+.+. +. +.+.+||.||.++++++|++|++ .|+++||+|+++++|++++++
T Consensus 6 ~~~~~~~~~~l~~~a~~~~~~~a~~~~---~~---~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~ 79 (576)
T PRK05620 6 QDVPLSLTRILEYGSTVHGDTTVTTWG---GA---EQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLE 79 (576)
T ss_pred hcCCCcHHHHHHHHHHhCCCceEEEEc---CC---ceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHH
Confidence 344578999999999999999999864 22 23689999999999999999996 799999999999999999999
Q ss_pred HHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCce
Q 014742 118 AMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVS 197 (419)
Q Consensus 118 ~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (419)
+++||+++|++++|+++..+.+++.++++.++++++|++....+.+.+.... ....+.++..+................
T Consensus 80 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~ 158 (576)
T PRK05620 80 VLFAVACMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKE-CPCVRAVVFIGPSDADSAAAHMPEGIK 158 (576)
T ss_pred HHHHHHhcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhh-CccccEEEEecCcccccchhccccccc
Confidence 9999999999999999999999999999999999999998776655443332 234455555543211100000011123
Q ss_pred eeeHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHH
Q 014742 198 CFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAH 277 (419)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h 277 (419)
..+|.++..............++++++++|||||||.||||.++|+++.......... ..+.+..++++++.+|++|
T Consensus 159 ~~~~~~l~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~---~~~~~~~~~~~l~~~pl~h 235 (576)
T PRK05620 159 VYSYEALLDGRSTVYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTT---DSLAVTHGESFLCCVPIYH 235 (576)
T ss_pred cccHHHHhhcCCCcCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhh---hhcCCCCCCeEEEeCChHH
Confidence 4567777764422222334567899999999999999999999999986554432211 1126778899999999999
Q ss_pred HHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhh
Q 014742 278 IYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGN 355 (419)
Q Consensus 278 ~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (419)
.+++...+.++..|+++++... ++..+++.|+++++|.+.++|.++..++.....
T Consensus 236 ~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~----------------------- 292 (576)
T PRK05620 236 VLSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLK----------------------- 292 (576)
T ss_pred hhhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhc-----------------------
Confidence 9999888889999999998764 899999999999999999999999887642110
Q ss_pred hccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 356 MKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
.. .+ . .++|.+++||+++++.+.++|++.+|+++++.||+||
T Consensus 293 ----------~~-~~---~--------~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE 334 (576)
T PRK05620 293 ----------NP-PE---R--------MSLQEIYVGGSAVPPILIKAWEERYGVDVVHVWGMTE 334 (576)
T ss_pred ----------cC-cc---c--------CceeEEEEcCCCCCHHHHHHHHHHhCCceeeeccccc
Confidence 00 00 0 2799999999999999999999989999999999998
No 36
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.2e-38 Score=320.10 Aligned_cols=314 Identities=17% Similarity=0.228 Sum_probs=253.0
Q ss_pred CCCHHHHHHHHHH-hCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHH
Q 014742 42 LESPWQFFCDSAK-RIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (419)
Q Consensus 42 ~~tl~~~l~~~a~-~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~l 120 (419)
.+.+.+.+.+++. .+|+++|+.+. +.. ..+.+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~a~~~~---~~~--~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~l 116 (570)
T PRK04319 42 VNIAYEAIDRHADGGRKDKVALRYL---DAS--RKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELYFALL 116 (570)
T ss_pred eeHHHHHHHHhhccCCCCceEEEEE---CCC--CceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHH
Confidence 4555678888877 57999999875 422 23589999999999999999999999999999999999999999999
Q ss_pred HHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeee
Q 014742 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (419)
Q Consensus 121 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (419)
||+++|++++|+++.++.+++.++++.++++++|++......... ...+..+.++.+++... ......+
T Consensus 117 a~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~---~~~~~~~~~~~~~~~~~--------~~~~~~~ 185 (570)
T PRK04319 117 GALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPA---DDLPSLKHVLLVGEDVE--------EGPGTLD 185 (570)
T ss_pred HHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccch---hcCCCceEEEEECCCcC--------CCcCccC
Confidence 999999999999999999999999999999999998775543321 12234455665553321 0112345
Q ss_pred HHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHH
Q 014742 201 WEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYD 280 (419)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g 280 (419)
+.++..............++++++++|||||||.||||+++|+++...+......+ ++..+|++++..|++|.+|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~g 260 (570)
T PRK04319 186 FNALMEQASDEFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVL-----DLHEDDVYWCTADPGWVTG 260 (570)
T ss_pred HHHHHhhcCCcCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhc-----CCCCCceEEecCChHHhhC
Confidence 66655443222333345678999999999999999999999999998877766555 7888999999999999998
Q ss_pred HHH-HHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhc
Q 014742 281 QII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (419)
Q Consensus 281 ~~~-~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (419)
+.. ++.++..|+++++... ++..+++.|+++++|+++++|.+++.+.+...
T Consensus 261 ~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-------------------------- 314 (570)
T PRK04319 261 TSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGD-------------------------- 314 (570)
T ss_pred chHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCC--------------------------
Confidence 775 7889999999999864 99999999999999999999999999865200
Q ss_pred cCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
......++ ++||.+++||+++++++.+++++.+|.++++.||+||
T Consensus 315 ---------~~~~~~~~--------~~lr~~~~gG~~l~~~~~~~~~~~~g~~i~~~YG~tE 359 (570)
T PRK04319 315 ---------DLVKKYDL--------SSLRHILSVGEPLNPEVVRWGMKVFGLPIHDNWWMTE 359 (570)
T ss_pred ---------cccccCCc--------ccceEEEEcccCCCHHHHHHHHHHhCCCeEeceeecc
Confidence 00111122 3899999999999999999999999999999999998
No 37
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.8e-37 Score=313.72 Aligned_cols=314 Identities=24% Similarity=0.373 Sum_probs=263.8
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHH
Q 014742 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (419)
Q Consensus 40 ~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~ 119 (419)
....++.++|.+.++.+|+++|+.+. + +.+||.||.+.++++|+.|.+.|+++|++|+++++|+.++++++
T Consensus 3 ~~~~~l~~~l~~~~~~~p~~~a~~~~---~------~~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~ 73 (521)
T PRK06187 3 DYPLTIGRILRHGARKHPDKEAVYFD---G------RRTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAY 73 (521)
T ss_pred cccCCHHHHHHHHHHHCCCceEEEeC---C------ceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHH
Confidence 45678999999999999999999875 4 35999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceee
Q 014742 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (419)
Q Consensus 120 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (419)
+||+++|++++|+++..+.+++..+++.+++++++++.+..+.+.+... .....+.++..++.... .......
T Consensus 74 la~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~~~ 146 (521)
T PRK06187 74 FAVPKIGAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILP-QLPTVRTVIVEGDGPAA------PLAPEVG 146 (521)
T ss_pred HHHHHcCeEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhh-ccCCccEEEEecCcccc------ccccccc
Confidence 9999999999999999999999999999999999999887766544433 22445566666554310 1112345
Q ss_pred eHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHH
Q 014742 200 SWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (419)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~ 279 (419)
.+.++..............++++++++|||||||.||+|.++|.++..........+ ++..+|++++.+|++|.+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~ 221 (521)
T PRK06187 147 EYEELLAAASDTFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWL-----KLSRDDVYLVIVPMFHVH 221 (521)
T ss_pred cHHHHhhcCCccCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhh-----CCCCCCEEEEeCCchHHh
Confidence 666666554333334455678999999999999999999999999998888766655 888999999999999999
Q ss_pred HHHHHHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhcc
Q 014742 280 DQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKK 358 (419)
Q Consensus 280 g~~~~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (419)
++...+.++..|+++++++. ++..+++.++++++|.++++|.+++.+.+....
T Consensus 222 ~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~-------------------------- 275 (521)
T PRK06187 222 AWGLPYLALMAGAKQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRA-------------------------- 275 (521)
T ss_pred hHHHHHHHHHhCCEEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCC--------------------------
Confidence 99886679999999999887 999999999999999999999999998652110
Q ss_pred CCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 359 GMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 359 ~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
....+ .++|.+++||+++++++.+++.+.+++++++.||+||
T Consensus 276 -----------~~~~~--------~~l~~v~~~Ge~l~~~~~~~~~~~~~~~v~~~YG~tE 317 (521)
T PRK06187 276 -----------YFVDF--------SSLRLVIYGGAALPPALLREFKEKFGIDLVQGYGMTE 317 (521)
T ss_pred -----------CccCc--------chhhEEEEcCcCCCHHHHHHHHHHhCcchheeeccCc
Confidence 11112 3899999999999999999999988999999999998
No 38
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=3.5e-37 Score=312.99 Aligned_cols=312 Identities=20% Similarity=0.216 Sum_probs=250.2
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHH
Q 014742 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (419)
Q Consensus 42 ~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA 121 (419)
..++.+.+.+.++.+|+++|++.. +...+..+.+||.||.++++++|.+|++.|+++|++|+++++|+++++++++|
T Consensus 21 ~~~~~~~~~~~~~~~p~~~a~~~~---~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la 97 (538)
T TIGR03208 21 DRTINDHFDAAVANCPDKPALTAY---RDGHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLA 97 (538)
T ss_pred cCcHHHHHHHHHHHCCCceEEEee---cccCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 468999999999999999999864 22222346899999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChh----hHhhcCccCCCCccEEEEecCCChhhHHHHHHhCce
Q 014742 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP----SILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVS 197 (419)
Q Consensus 122 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (419)
|+++|++++|+++..+.+++.++++.++++++++++.... ...............++..+...
T Consensus 98 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 164 (538)
T TIGR03208 98 CARIGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDGDG------------- 164 (538)
T ss_pred HHhcCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecCCC-------------
Confidence 9999999999999999999999999999999999876421 11111122223344555554321
Q ss_pred eeeHHHHHhcCC----CC----CCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEE
Q 014742 198 CFSWEEFLQLGT----LD----CELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTY 269 (419)
Q Consensus 198 ~~~~~~~~~~~~----~~----~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~ 269 (419)
...++.+..... .. .......++++++++|||||||.||||+++|+++...+......+ ++..+|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~-----~~~~~d~~ 239 (538)
T TIGR03208 165 DDSFDRVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERL-----ELGGGDVI 239 (538)
T ss_pred CcCHHHHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhc-----CCCCCCeE
Confidence 112333222110 00 111234678999999999999999999999999999888766655 77889999
Q ss_pred EEecChHHHHHHHH-HHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHH
Q 014742 270 FSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEF 347 (419)
Q Consensus 270 l~~~pl~h~~g~~~-~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~ 347 (419)
++.+|++|.+++.. ++.+++.|+++++.+. ++..+++.++++++|++.++|.++..+...+...
T Consensus 240 l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~-------------- 305 (538)
T TIGR03208 240 LMASPMAHQTGFMYGLMMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKES-------------- 305 (538)
T ss_pred EEeCCchhHHHHHHHHHHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhcc--------------
Confidence 99999999999876 7788999999999876 9999999999999999999999998886522110
Q ss_pred HHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 348 AYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
..++ +++|.+++||+++++++.+++.+.+|.++++.||+||
T Consensus 306 -----------------------~~~~--------~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE 346 (538)
T TIGR03208 306 -----------------------GAPV--------PSLFTFLCAGAPIPGILVERAWELLGALIVSAWGMTE 346 (538)
T ss_pred -----------------------CCCC--------CcceEEEEcCCCCCHHHHHHHHHHcCCeEEeeeccCc
Confidence 0011 3899999999999999999999988999999999998
No 39
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=2.9e-37 Score=311.89 Aligned_cols=309 Identities=25% Similarity=0.357 Sum_probs=254.8
Q ss_pred CHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHH
Q 014742 44 SPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACN 123 (419)
Q Consensus 44 tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~ 123 (419)
++.+.|...++.+|+++++.+. + +.+||.||.+++.+++++|++.|+.+|++|+++++|+.+++++++||+
T Consensus 1 ~~~~~~~~~~~~~p~~~a~~~~---~------~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~ 71 (515)
T TIGR03098 1 LLHHLLEDAAARLPDATALVHH---D------RTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAA 71 (515)
T ss_pred CHHHHHHHHHHHCCCCeEEEEC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 4788999999999999999864 3 479999999999999999999999999999999999999999999999
Q ss_pred HcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeHHH
Q 014742 124 SQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEE 203 (419)
Q Consensus 124 ~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (419)
++|++++|+++.++.+++..+++.++++++|++....+.+.+..... .....++.+++..... ........|++
T Consensus 72 ~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 145 (515)
T TIGR03098 72 LAGGVFVPINPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGC-HDLRTLILVGEPAHAS-----EGGGESPSWPK 145 (515)
T ss_pred hcCEEEEeCCCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhcc-cccceEEEecCccccc-----CCccccccHHH
Confidence 99999999999999999999999999999999987766554443322 3445555555432100 00112345666
Q ss_pred HHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHH
Q 014742 204 FLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII 283 (419)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~ 283 (419)
+...... ........+++++++|||||||.||+|.+||.++...+......+ .+..+|++++.+|++|.+++..
T Consensus 146 ~~~~~~~-~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~~~~~ 219 (515)
T TIGR03098 146 LLALGDA-DPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYL-----ENRPDDRLLAVLPLSFDYGFNQ 219 (515)
T ss_pred hhccccc-cccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHh-----CCCcccEEEEECchhhHhHHHH
Confidence 6543321 122334567899999999999999999999999998888866655 7788899999999999999988
Q ss_pred HHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccCCCC
Q 014742 284 ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQ 362 (419)
Q Consensus 284 ~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (419)
++.++..|+++++.+. +++.+++.++++++|++.++|.++..+.+..
T Consensus 220 ~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-------------------------------- 267 (515)
T TIGR03098 220 LTTAFYVGATVVLHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLD-------------------------------- 267 (515)
T ss_pred HHHHHHcCCEEEEcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhcc--------------------------------
Confidence 8899999999999877 9999999999999999999999999875410
Q ss_pred CCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhh-CCceeeeccCCC
Q 014742 363 NKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGMVE 419 (419)
Q Consensus 363 ~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~tE 419 (419)
.+..++ .++|.+++||+++++++.+.+++.+ +..+++.||+||
T Consensus 268 ------~~~~~~--------~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE 311 (515)
T TIGR03098 268 ------WPESAA--------PSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMYGLTE 311 (515)
T ss_pred ------cCCCCc--------cceEEEEecCCcCCHHHHHHHHHHCCCCeEeeeecccc
Confidence 000011 3899999999999999999999988 788999999998
No 40
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=3.3e-37 Score=314.55 Aligned_cols=332 Identities=20% Similarity=0.226 Sum_probs=247.0
Q ss_pred CCcceecCccCCCCCCCCCCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHh-CCCC
Q 014742 22 GGPVYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRS-RGVN 100 (419)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~-~g~~ 100 (419)
+..++++..++..+|.. +..++.+.+... +.+|+++|+++. ++. ..+||.||.++++++|++|++ .|++
T Consensus 21 ~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~-~~~~~~~a~~~~---~~~----~~~Ty~el~~~~~~lA~~L~~~~G~~ 90 (560)
T PLN02574 21 ETGIYSSKHPPVPLPSD--PNLDAVSFIFSH-HNHNGDTALIDS---STG----FSISYSELQPLVKSMAAGLYHVMGVR 90 (560)
T ss_pred CCeeecCCCCCCCCCCC--CCCCHHHHHhcC-cccCCCCEEEEC---CCC----CcccHHHHHHHHHHHHHHHHHHhCCC
Confidence 35667776544333332 233444444433 678999999864 221 369999999999999999998 9999
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEe
Q 014742 101 PGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSF 180 (419)
Q Consensus 101 ~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (419)
+||+|+++++|+.+++++++||+++|++++|+++..+.+++.++++.++++++|++.+....+... ... ++.+
T Consensus 91 ~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~------~~~-~~~~ 163 (560)
T PLN02574 91 QGDVVLLLLPNSVYFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPL------GVP-VIGV 163 (560)
T ss_pred CCCEEEEECCCcchHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhc------CCc-EEec
Confidence 999999999999999999999999999999999999999999999999999999998765554321 111 2222
Q ss_pred cCCChhhHHHHHHhCceeeeHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcC
Q 014742 181 ANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTG 260 (419)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~ 260 (419)
++..... ........++++..............++++++++|||||||.||||++||+++...+..+........
T Consensus 164 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~ 238 (560)
T PLN02574 164 PENYDFD-----SKRIEFPKFYELIKEDFDFVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQY 238 (560)
T ss_pred Ccccccc-----cCccCcccHHHHhhcCCcccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhcccccc
Confidence 2110000 00011234555544432222233445789999999999999999999999999987765433110001
Q ss_pred ccCCCCcEEEEecChHHHHHHHH-HHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccC
Q 014742 261 KVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGG 338 (419)
Q Consensus 261 ~~~~~~d~~l~~~pl~h~~g~~~-~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~ 338 (419)
.....++++++.+|++|.+|+.. ++.++..|+++++.+. ++..+++.|+++++|++.++|.++..+.+...
T Consensus 239 ~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~------- 311 (560)
T PLN02574 239 EYPGSDNVYLAALPMFHIYGLSLFVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAK------- 311 (560)
T ss_pred ccCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCcc-------
Confidence 12235688899999999999986 6677889999999877 99999999999999999999999999865210
Q ss_pred chHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhh-CCceeeeccC
Q 014742 339 ALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGM 417 (419)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~ 417 (419)
.....++ +++|.+++||+++++++++++.+.+ ++++++.||+
T Consensus 312 -----------------------------~~~~~~~--------~~lr~~~~gg~~l~~~~~~~~~~~~~~~~v~~~YG~ 354 (560)
T PLN02574 312 -----------------------------GVCGEVL--------KSLKQVSCGAAPLSGKFIQDFVQTLPHVDFIQGYGM 354 (560)
T ss_pred -----------------------------ccccCcc--------ccceEEEEecccCCHHHHHHHHHHCCCCcEEecccc
Confidence 0011122 3899999999999999999999988 7899999999
Q ss_pred CC
Q 014742 418 VE 419 (419)
Q Consensus 418 tE 419 (419)
||
T Consensus 355 tE 356 (560)
T PLN02574 355 TE 356 (560)
T ss_pred cc
Confidence 98
No 41
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=4.7e-37 Score=312.58 Aligned_cols=325 Identities=18% Similarity=0.255 Sum_probs=253.4
Q ss_pred CCCcceecCccCCCCCCCCCCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCC
Q 014742 21 SGGPVYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVN 100 (419)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~ 100 (419)
....+|++.+..... +...|+.+.|.+.++.+|+++|+.+. .++ +.+||.||.++++++|+.|++.|++
T Consensus 10 ~~~~~~~~~~~~~~~----~~~~~~~~~l~~~a~~~p~~~a~~~~---~~~----~~~Ty~~l~~~~~~la~~L~~~g~~ 78 (546)
T PLN02330 10 DNEHIFRSRYPSVPV----PDKLTLPDFVLQDAELYADKVAFVEA---VTG----KAVTYGEVVRDTRRFAKALRSLGLR 78 (546)
T ss_pred ccceeeccCCCCCCC----CCCCcHHHHHhhhhhcCCCccEEEec---CCC----CcccHHHHHHHHHHHHHHHHHhCCC
Confidence 344567777655322 34688999999999999999999863 221 4799999999999999999999999
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEe
Q 014742 101 PGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSF 180 (419)
Q Consensus 101 ~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (419)
+|++|+++++|+++++++++||+++|++++|+++..+.+++.++++.++++++++++.....+... ..+ ++.+
T Consensus 79 ~g~~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~------~~~-~i~~ 151 (546)
T PLN02330 79 KGQVVVVVLPNVAEYGIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGL------GLP-VIVL 151 (546)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhc------CCc-EEEe
Confidence 999999999999999999999999999999999999999999999999999999998876655332 112 3333
Q ss_pred cCCChhhHHHHHHhCceeeeHHHHHhcCC---CCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhh
Q 014742 181 ANVSSSQKKEAEELGVSCFSWEEFLQLGT---LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFV 257 (419)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~ 257 (419)
+.... .....|.++..... .........++++++++|||||||.||||.++|+++..++.......
T Consensus 152 ~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~- 220 (546)
T PLN02330 152 GEEKI----------EGAVNWKELLEAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSV- 220 (546)
T ss_pred cCCCC----------CCcccHHHHHhhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhcc-
Confidence 32210 11234555554331 11122334568999999999999999999999999987664321111
Q ss_pred hcCccCCCCcEEEEecChHHHHHHHH-HHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhh
Q 014742 258 VTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKIS 335 (419)
Q Consensus 258 ~~~~~~~~~d~~l~~~pl~h~~g~~~-~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~ 335 (419)
.......++.+..+|++|.+++.. ++.++..|+++++.+. ++..+++.++++++|.+.++|.++..+++.
T Consensus 221 --~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~------ 292 (546)
T PLN02330 221 --GPEMIGQVVTLGLIPFFHIYGITGICCATLRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKN------ 292 (546)
T ss_pred --CccccCceEEEEecChHHHHHHHHHHHHHhhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhC------
Confidence 112224568899999999999875 6788999999999877 999999999999999999999999988641
Q ss_pred ccCchHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhh-CCceeee
Q 014742 336 SGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQG 414 (419)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~-~~~v~~~ 414 (419)
+..+..++.. .++|.+++||+++++++.+++++.| |.++++.
T Consensus 293 -------------------------------~~~~~~~~~~------~~l~~i~~~g~~l~~~~~~~~~~~~~~~~~~~~ 335 (546)
T PLN02330 293 -------------------------------PIVEEFDLSK------LKLQAIMTAAAPLAPELLTAFEAKFPGVQVQEA 335 (546)
T ss_pred -------------------------------ccccccccch------heeeeEEEcCCcCCHHHHHHHHHHcCCCeEEec
Confidence 1111111211 1689999999999999999999998 8999999
Q ss_pred ccCCC
Q 014742 415 YGMVE 419 (419)
Q Consensus 415 YG~tE 419 (419)
||+||
T Consensus 336 YG~tE 340 (546)
T PLN02330 336 YGLTE 340 (546)
T ss_pred ccccc
Confidence 99998
No 42
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.8e-37 Score=311.96 Aligned_cols=318 Identities=20% Similarity=0.302 Sum_probs=251.9
Q ss_pred CCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHH
Q 014742 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (419)
Q Consensus 41 ~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~l 120 (419)
-..++.++|+.+++.+|+.+++.+. ..++.+.+||.||.++++++|++|.+.|+++||+|+++++|+++++.+++
T Consensus 8 ~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~l 82 (539)
T PRK07008 8 MPLLISSLIAHAARHAGDTEIVSRR-----VEGDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYY 82 (539)
T ss_pred CCCCHHHHHHHHHhhCCCceEEEee-----ccCcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHH
Confidence 3467999999999999999888753 11234679999999999999999999999999999999999999999999
Q ss_pred HHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeee
Q 014742 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (419)
Q Consensus 121 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (419)
||+++|++++|+++..+.+++..+++.+++++++++.+..+.+.+... .....+.++...+..... .......+
T Consensus 83 a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 156 (539)
T PRK07008 83 GVSGSGAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAP-QCPNVKGWVAMTDAAHLP-----AGSTPLLC 156 (539)
T ss_pred HHHhcCcEEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHh-hCCCceEEEEEccCCccc-----cCCccccc
Confidence 999999999999999999999999999999999999876655433322 223344444444322100 00122456
Q ss_pred HHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhh--hhhhhhhhcCccCCCCcEEEEecChHHH
Q 014742 201 WEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVL--SVDQMFVVTGKVCSEEDTYFSFLPLAHI 278 (419)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~--~~~~~~~~~~~~~~~~d~~l~~~pl~h~ 278 (419)
++++..............++++++++|||||||.||+|++||.++..+.. .+...+ +...+|++++.+|++|.
T Consensus 157 ~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~h~ 231 (539)
T PRK07008 157 YETLVGAQDGDYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAM-----GLSARDAVLPVVPMFHV 231 (539)
T ss_pred HHHHhcccCCCcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhccccc-----CCCCCceEEecCchHHh
Confidence 66665443222223345678899999999999999999999999875432 222233 67788999999999999
Q ss_pred HHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhh
Q 014742 279 YDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNM 356 (419)
Q Consensus 279 ~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (419)
+++...+.++..|+++++.+. ++..+++.++++++|++.++|.++..+++..+.
T Consensus 232 ~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~------------------------ 287 (539)
T PRK07008 232 NAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMRE------------------------ 287 (539)
T ss_pred hhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccc------------------------
Confidence 887777788999999999754 899999999999999999999999988652110
Q ss_pred ccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 357 KKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 357 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
...++ +++|.++++|+++++++.+++++.+|+++++.||+||
T Consensus 288 -------------~~~~~--------~~l~~~~~~G~~l~~~~~~~~~~~~~~~l~~~YG~tE 329 (539)
T PRK07008 288 -------------AGLRF--------STLRRTVIGGSACPPAMIRTFEDEYGVEVIHAWGMTE 329 (539)
T ss_pred -------------cCCCc--------ccceEEEEcCCCCCHHHHHHHHHHhCCceeccccccc
Confidence 01112 3899999999999999999999999999999999998
No 43
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=5.2e-37 Score=307.63 Aligned_cols=287 Identities=22% Similarity=0.296 Sum_probs=241.4
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHH
Q 014742 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (419)
Q Consensus 42 ~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA 121 (419)
+.++.++|.+++..+||++|+.+. + +.+||.||.+++++++++|.+.|+++||+|+++++|+.+++++++|
T Consensus 1 ~~~~~~~l~~~a~~~p~~~a~~~~---~------~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la 71 (483)
T PRK03640 1 METMPNWLKQRAFLTPDRTAIEFE---E------KKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHA 71 (483)
T ss_pred CCcHHHHHHHHHHhCCCceEEEeC---C------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 368999999999999999999864 3 5899999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeH
Q 014742 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (419)
Q Consensus 122 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (419)
|+++|++++|+++..+.+++..+++.++++++++++.......... ...+
T Consensus 72 ~~~~G~~~v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~------------------------------~~~~ 121 (483)
T PRK03640 72 LQQLGAVAVLLNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGI------------------------------SVKF 121 (483)
T ss_pred HHhCCcEEEecCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhc------------------------------cccH
Confidence 9999999999999999999999999999999999876544321110 0013
Q ss_pred HHHHhcC-CCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHH
Q 014742 202 EEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYD 280 (419)
Q Consensus 202 ~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g 280 (419)
+++.... ..........++++++++|||||||.||+|.+||.++...+......+ ++..+|++++.+|++|.++
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~g 196 (483)
T PRK03640 122 AELMNGPKEEAEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNL-----GLTEDDCWLAAVPIFHISG 196 (483)
T ss_pred HHHhhcccccCCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhc-----CCCcCcEEEEecCHHHHHH
Confidence 3333222 111122234578999999999999999999999999988776655545 7889999999999999999
Q ss_pred HHHHHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccC
Q 014742 281 QIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKG 359 (419)
Q Consensus 281 ~~~~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (419)
+..++.++..|+++++.+. ++..+++.++++++|++.++|.++..+.+.+.
T Consensus 197 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~---------------------------- 248 (483)
T PRK03640 197 LSILMRSVIYGMRVVLVEKFDAEKINKLLQTGGVTIISVVSTMLQRLLERLG---------------------------- 248 (483)
T ss_pred HHHHHHHHhcCCEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcC----------------------------
Confidence 9888889999999999987 99999999999999999999999999864211
Q ss_pred CCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 360 MPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 360 ~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
.... . .++|.+++||+++++.+.+.+++. |+++++.||+||
T Consensus 249 ------~~~~----~--------~~lr~~~~~g~~~~~~~~~~~~~~-~~~~~~~YG~tE 289 (483)
T PRK03640 249 ------EGTY----P--------SSFRCMLLGGGPAPKPLLEQCKEK-GIPVYQSYGMTE 289 (483)
T ss_pred ------cccc----C--------CcceEEEEcCCCCCHHHHHHHHHh-CCCeeeeeccCc
Confidence 0000 0 389999999999999999999884 999999999998
No 44
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=4.6e-37 Score=311.32 Aligned_cols=307 Identities=17% Similarity=0.166 Sum_probs=246.1
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHH
Q 014742 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (419)
Q Consensus 42 ~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA 121 (419)
..++.+.|+++++.+|+++|+++. + +.+||.||.++++++|.+|.+.|+++|++|+++++|+++++++++|
T Consensus 22 ~~~l~~~~~~~a~~~p~~~a~~~~----~-----~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la 92 (527)
T TIGR02275 22 DKPLTDILRDQAARYPDAIAIICG----N-----RQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFA 92 (527)
T ss_pred CCcHHHHHHHHHHHCCCceEEEeC----C-----ceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHH
Confidence 567999999999999999999864 3 5899999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChh----hHhhcCccCCCCccEEEEecCCChhhHHHHHHhCce
Q 014742 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP----SILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVS 197 (419)
Q Consensus 122 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (419)
|+++|++++++++..+.+++.++++.+++++++++..... ...+......+....++...+...
T Consensus 93 ~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 160 (527)
T TIGR02275 93 LLKLGIAPVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQTRV------------ 160 (527)
T ss_pred HHHcCeEEeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCCCC------------
Confidence 9999999999999999999999999999999999875421 111111111223344444332110
Q ss_pred eeeHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHH
Q 014742 198 CFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAH 277 (419)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h 277 (419)
.....................++++++++|||||||.||+|.+||.++..++......+ .+..+|++++.+|++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~d~~l~~~P~~h 235 (527)
T TIGR02275 161 EAELFLWLESPAEPVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEIC-----WLTQQTRYLCALPAAH 235 (527)
T ss_pred cchhhHHhhCcCccccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhc-----CCCcCCEEEECCChHh
Confidence 00011111111111223345678999999999999999999999999998888766555 7788999999999999
Q ss_pred HHHHHH--HHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhh
Q 014742 278 IYDQII--ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLG 354 (419)
Q Consensus 278 ~~g~~~--~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (419)
.+++.. ++.++..|+++++.+. ++..+++.++++++|++.++|.++..+.+....
T Consensus 236 ~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~---------------------- 293 (527)
T TIGR02275 236 NYPLSSPGALGVFYAGGCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASK---------------------- 293 (527)
T ss_pred hhhhhHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccc----------------------
Confidence 999874 6788999999999776 899999999999999999999999887652110
Q ss_pred hhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 355 NMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
...++ +++|.+++||+++++++.+++.+.+|.++++.||+||
T Consensus 294 ---------------~~~~~--------~~lr~~~~gG~~l~~~~~~~~~~~~g~~~~~~YG~tE 335 (527)
T TIGR02275 294 ---------------SRYDL--------SSLKLLQVGGAKFSEAAARRVPAVFGCQLQQVFGMAE 335 (527)
T ss_pred ---------------cCCCc--------cceEEEEEcCCCCCHHHHHHHHHHhCCeEEeeeccCc
Confidence 00112 3899999999999999999999999999999999998
No 45
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=1.1e-36 Score=309.91 Aligned_cols=309 Identities=20% Similarity=0.262 Sum_probs=246.4
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHH
Q 014742 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (419)
Q Consensus 42 ~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA 121 (419)
..++.++|...++.+||++|+++. ++ +.+||.|+.++++++|++|++.|+++||+|+++++|+++++++++|
T Consensus 22 ~~~l~~~~~~~~~~~pd~~a~~~~---~~-----~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA 93 (547)
T PRK06087 22 DASLADYWQQTARAMPDKIAVVDN---HG-----ASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLA 93 (547)
T ss_pred CCCHHHHHHHHHHHCCCceEEEcC---CC-----CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 457999999999999999999864 43 4799999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCC-----hhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCc
Q 014742 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK-----IPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGV 196 (419)
Q Consensus 122 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (419)
|+++|++++|+++.++.+++.++++.+++++++++... .+.+... .........++..+..... .
T Consensus 94 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---------~ 163 (547)
T PRK06087 94 CLKVGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPL-QNQLPQLQQIVGVDKLAPA---------T 163 (547)
T ss_pred HHHcCcEEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHH-HhhCCCCcEEEEeCCcCCC---------c
Confidence 99999999999999999999999999999999998632 1122111 1122334455555432210 0
Q ss_pred eeeeHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChH
Q 014742 197 SCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLA 276 (419)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~ 276 (419)
...++.++...............+++++|+|||||||.||+|.++|.+++.........+ ++..+|++++.+|++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~-----~~~~~d~~l~~~pl~ 238 (547)
T PRK06087 164 SSLSLSQIIADYEPLTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARL-----NLTWQDVFMMPAPLG 238 (547)
T ss_pred CccCHHHHhccCCcccCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-----CCCCCCeEEEecchH
Confidence 112344444332111122234678999999999999999999999999998877755555 778899999999999
Q ss_pred HHHHHHH-HHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhh
Q 014742 277 HIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLG 354 (419)
Q Consensus 277 h~~g~~~-~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (419)
|.+++.. ++.++..|+++++.+. ++..+++.|+++++|.+.++|.++..++.....
T Consensus 239 h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~---------------------- 296 (547)
T PRK06087 239 HATGFLHGVTAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEK---------------------- 296 (547)
T ss_pred HHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhcccc----------------------
Confidence 9999876 7788999999999877 999999999999999999887777666542110
Q ss_pred hhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 355 NMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
...++ +++|.+++||+++++++.+.+.+. |+++++.||+||
T Consensus 297 ---------------~~~~~--------~~lr~i~~gG~~~~~~~~~~~~~~-~~~l~~~YG~TE 337 (547)
T PRK06087 297 ---------------QPADL--------SALRFFLCGGTTIPKKVARECQQR-GIKLLSVYGSTE 337 (547)
T ss_pred ---------------CCCCC--------CCeEEEEEcCCCCCHHHHHHHHHc-CCcEEEEecccc
Confidence 00112 389999999999999999998885 999999999998
No 46
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=1.2e-36 Score=309.11 Aligned_cols=312 Identities=19% Similarity=0.214 Sum_probs=249.5
Q ss_pred CCCCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHH
Q 014742 38 SPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWII 117 (419)
Q Consensus 38 ~~~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~ 117 (419)
.|...+++.++|.++++.+||++|+++. + +.+||.||.+++.++|+.|.+.|+++|++|+++++|++++++
T Consensus 16 ~~~~~~~l~~~l~~~a~~~p~~~a~~~~---~------~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~ 86 (542)
T PRK06155 16 LPPSERTLPAMLARQAERYPDRPLLVFG---G------TRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLD 86 (542)
T ss_pred CCccccCHHHHHHHHHHHCCCCeEEEeC---C------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHH
Confidence 4456888999999999999999999864 3 479999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCce
Q 014742 118 AMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVS 197 (419)
Q Consensus 118 ~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (419)
+++||+++|++++|+++.++.+++..+++.+++++++++.+....+.+..... ...+.++.++...... ....
T Consensus 87 ~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~------~~~~ 159 (542)
T PRK06155 87 VFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGD-LPLPAVWLLDAPASVS------VPAG 159 (542)
T ss_pred HHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhcccc-cCcceEEEecCccccc------cccc
Confidence 99999999999999999999999999999999999999988776654433221 2345555555432100 0000
Q ss_pred eeeHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHH
Q 014742 198 CFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAH 277 (419)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h 277 (419)
+ ...++.. ...........++++++++|||||||.||+|.++|.++..........+ ++.+++++++.+|++|
T Consensus 160 ~-~~~~~~~-~~~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~-----~~~~~~~~l~~~pl~~ 232 (542)
T PRK06155 160 W-STAPLPP-LDAPAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDL-----EIGADDVLYTTLPLFH 232 (542)
T ss_pred c-chhhhcc-cCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhc-----CCCCCCEEEEecCHHH
Confidence 0 0111111 1111122344678999999999999999999999999988777655555 7888999999999999
Q ss_pred HHHHHHHHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhh
Q 014742 278 IYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNM 356 (419)
Q Consensus 278 ~~g~~~~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (419)
.+++..++.++..|+++++.+. ++..+++.|+++++|++.++|.++..|.+...
T Consensus 233 ~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~------------------------- 287 (542)
T PRK06155 233 TNALNAFFQALLAGATYVLEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPA------------------------- 287 (542)
T ss_pred HHHHHHHHHHHHcCceEEeeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcC-------------------------
Confidence 9999888899999999999877 89999999999999999999999988764210
Q ss_pred ccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 357 KKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 357 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
.....+ +++|.++.|| +++.+.+.+++.+|+++++.||+||
T Consensus 288 ------------~~~~~~--------~~l~~~~~g~--~~~~~~~~~~~~~~~~v~~~YG~tE 328 (542)
T PRK06155 288 ------------RESDRA--------HRVRVALGPG--VPAALHAAFRERFGVDLLDGYGSTE 328 (542)
T ss_pred ------------cccccc--------CceEEEEEcC--CCHHHHHHHHHHcCCCEEeeecccc
Confidence 000011 3788777655 5789999999999999999999998
No 47
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.3e-36 Score=311.22 Aligned_cols=319 Identities=24% Similarity=0.384 Sum_probs=248.4
Q ss_pred CCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHH
Q 014742 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (419)
Q Consensus 41 ~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~l 120 (419)
...++.++++.+++.+|+++|+.+. + +.+||.||.++++++|+.|.+.|+++||+|+++++|+++++++++
T Consensus 30 ~~~~l~~~~~~~~~~~p~~~a~~~~----~-----~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~l 100 (573)
T PRK05605 30 GDTTLVDLYDNAVARFGDRPALDFF----G-----ATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFY 100 (573)
T ss_pred CcCCHHHHHHHHHHHCCCCeEEEeC----C-----CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHH
Confidence 3558999999999999999999874 3 479999999999999999999999999999999999999999999
Q ss_pred HHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCCh---hhHHH-------
Q 014742 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSS---SQKKE------- 190 (419)
Q Consensus 121 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~------- 190 (419)
||+++|++++|+++.++.+++.+++..++++++|+++.....+.+.... .....++..+.... .....
T Consensus 101 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 178 (573)
T PRK05605 101 AVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRT--TPLETIVSVNMIAAMPLLQRLALRLPIPA 178 (573)
T ss_pred HHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhc--cccceeEeeeccccccccccccccccccc
Confidence 9999999999999999999999999999999999988765544333221 12233333321100 00000
Q ss_pred -------HHHhCceeeeHHHHHhcCCCC----CCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhc
Q 014742 191 -------AEELGVSCFSWEEFLQLGTLD----CELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVT 259 (419)
Q Consensus 191 -------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~ 259 (419)
..........|+++....... ........+++++++|||||||.||+|.+||+++...+......+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~--- 255 (573)
T PRK05605 179 LRKARAALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWV--- 255 (573)
T ss_pred ccccccccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhc---
Confidence 000011234566655432111 122334578999999999999999999999999988776543322
Q ss_pred Ccc-CCCCcEEEEecChHHHHHHHH-HHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhc
Q 014742 260 GKV-CSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISS 336 (419)
Q Consensus 260 ~~~-~~~~d~~l~~~pl~h~~g~~~-~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~ 336 (419)
.+ ...++++++.+|++|.+|+.. ++.++..|+++++.+. +++.+++.|+++++|++.++|.+++.+.+...
T Consensus 256 -~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~----- 329 (573)
T PRK05605 256 -PGLGDGPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAE----- 329 (573)
T ss_pred -cccCCCCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCcc-----
Confidence 11 234689999999999999876 6677999999999877 99999999999999999999999999875211
Q ss_pred cCchHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeecc
Q 014742 337 GGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYG 416 (419)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG 416 (419)
....++ +++|.+++||+++++++.+++++.++.++++.||
T Consensus 330 --------------------------------~~~~~~--------~~lr~i~~gg~~l~~~~~~~~~~~~~~~i~~~YG 369 (573)
T PRK05605 330 --------------------------------ERGVDL--------SGVRNAFSGAMALPVSTVELWEKLTGGLLVEGYG 369 (573)
T ss_pred --------------------------------ccCCCc--------hhccEEEECCCcCCHHHHHHHHHHhCCCeecccc
Confidence 011112 2899999999999999999999988999999999
Q ss_pred CCC
Q 014742 417 MVE 419 (419)
Q Consensus 417 ~tE 419 (419)
+||
T Consensus 370 ~TE 372 (573)
T PRK05605 370 LTE 372 (573)
T ss_pred cch
Confidence 998
No 48
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.5e-37 Score=314.02 Aligned_cols=315 Identities=19% Similarity=0.201 Sum_probs=239.7
Q ss_pred CCCCCCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhH
Q 014742 36 LESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW 115 (419)
Q Consensus 36 ~~~~~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~ 115 (419)
-+++....++.+.|.+.++.+|+++|+++. ++. +.+||.||.++++++|+.|++.|+++|++|+++++|++++
T Consensus 7 ~~~~~~~~~~~~~l~~~a~~~p~~~a~~~~---~~~----~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~ 79 (540)
T PRK05857 7 QAMPQLPSTVLDRVFEQARQQPEAIALRRC---DGT----SALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPET 79 (540)
T ss_pred cccccCCcchHHHHHHHHhhCCCcEEEeec---CCC----ceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHH
Confidence 455666779999999999999999999864 432 4799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhC
Q 014742 116 IIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELG 195 (419)
Q Consensus 116 ~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (419)
+++++||+++|++++|+++.++.+++.++++.++++++|++....... ..+......++. +..+......
T Consensus 80 ~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~-------- 149 (540)
T PRK05857 80 YLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMAS-SAVPEALHSIPV-IAVDIAAVTR-------- 149 (540)
T ss_pred HHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhcc-ccccccccccce-eEeecccccc--------
Confidence 999999999999999999999999999999999999999998654221 111111112222 2222111000
Q ss_pred ceeeeHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecCh
Q 014742 196 VSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPL 275 (419)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl 275 (419)
. +.+..... .........++++++++|||||||.||||.++|+++.++........ ........++++++.+|+
T Consensus 150 --~--~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~ 223 (540)
T PRK05857 150 --E--SEHSLDAA-SLAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEG-LNWVTWVVGETTYSPLPA 223 (540)
T ss_pred --c--cccccccc-ccccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhcc-ccccccccCceeeecCCc
Confidence 0 00000000 01112234678999999999999999999999999987655432210 001245567899999999
Q ss_pred HHHHHHHHHHHHHhcCceEEEeCCCHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhh
Q 014742 276 AHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGN 355 (419)
Q Consensus 276 ~h~~g~~~~l~~l~~G~~ivl~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (419)
+|.+++...+.+++.|+++++.+.++..+++.|+++++|+++++|.+++.++....
T Consensus 224 ~h~~~l~~~~~~l~~G~~~v~~~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~------------------------ 279 (540)
T PRK05857 224 THIGGLWWILTCLMHGGLCVTGGENTTSLLEILTTNAVATTCLVPTLLSKLVSELK------------------------ 279 (540)
T ss_pred cccchHHHHHHHhhcceeEEecCCChhHHHHHHHhcCcceEEeChHHHHHHHhccc------------------------
Confidence 99999887888899999988765689999999999999999999999999865211
Q ss_pred hccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 356 MKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
....++ +++|.+++||++++....++ .+.+|+++++.||+||
T Consensus 280 -------------~~~~~~--------~~lr~~~~gG~~~~~~~~~~-~~~~g~~i~~~YG~TE 321 (540)
T PRK05857 280 -------------SANATV--------PSLRLVGYGGSRAIAADVRF-IEATGVRTAQVYGLSE 321 (540)
T ss_pred -------------cCCCcC--------ccceEEEEcCccCCchhHHH-HHHhCCeeecccCCCc
Confidence 001112 38999999999998877754 4567999999999998
No 49
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-36 Score=307.64 Aligned_cols=312 Identities=23% Similarity=0.304 Sum_probs=252.6
Q ss_pred CCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHH
Q 014742 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (419)
Q Consensus 41 ~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~l 120 (419)
...++.++|...++.+|+++|+++. + ..+||.||.+++.++|+.|.+.|+++||+|+++++|+.+++++++
T Consensus 9 ~~~~l~~~l~~~a~~~~~~~a~~~~---~------~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~ 79 (523)
T PRK08316 9 RRQTIGDILRRSARRYPDKTALVFG---D------RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWL 79 (523)
T ss_pred cCCCHHHHHHHHHHHCCCCeEEEEC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 4678999999999999999999875 3 579999999999999999999999999999999999999999999
Q ss_pred HHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeee
Q 014742 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (419)
Q Consensus 121 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (419)
||+++|++++|+++.++.+++..+++.++++++|++......+.+...... ...+........ .........
T Consensus 80 a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~------~~~~~~~~~ 151 (523)
T PRK08316 80 ACARAGAVHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLP--VDTLILSLVLGG------REAPGGWLD 151 (523)
T ss_pred HHHhcCcEEEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcC--ccceeeeecccc------cccccchhh
Confidence 999999999999999999999999999999999999887766654332211 111111110000 000112344
Q ss_pred HHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHH
Q 014742 201 WEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYD 280 (419)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g 280 (419)
+.++...............+++++++|||||||.||+|.++|.+++..+......+ ++..+|++++.+|++|.++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~~~~~p~~h~~g 226 (523)
T PRK08316 152 FADWAEAGSVAEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAG-----DMSADDIPLHALPLYHCAQ 226 (523)
T ss_pred HHHHHhcCCCccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHh-----CCCCCceEEEccCCchhhh
Confidence 45444433222233445678999999999999999999999999998877766555 7888999999999999999
Q ss_pred HHH-HHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhcc
Q 014742 281 QII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKK 358 (419)
Q Consensus 281 ~~~-~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (419)
+.. ++.++..|+++++.+. +++.+++.++++++|++.++|.++..+++.
T Consensus 227 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~----------------------------- 277 (523)
T PRK08316 227 LDVFLGPYLYVGATNVILDAPDPELILRTIEAERITSFFAPPTVWISLLRH----------------------------- 277 (523)
T ss_pred HHHHHHHHHhcCceEEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcC-----------------------------
Confidence 876 5667899999999876 999999999999999999999999888652
Q ss_pred CCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhh-CCceeeeccCCC
Q 014742 359 GMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGMVE 419 (419)
Q Consensus 359 ~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~tE 419 (419)
...+..++ .++|.+++||++++.++.+.+++.+ +.++++.||+||
T Consensus 278 --------~~~~~~~~--------~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~YG~tE 323 (523)
T PRK08316 278 --------PDFDTRDL--------SSLRKGYYGASIMPVEVLKELRERLPGLRFYNCYGQTE 323 (523)
T ss_pred --------cccccCCc--------ccceEEEEcCCcCCHHHHHHHHHHcCCCceeeeecccc
Confidence 11111222 2899999999999999999999988 789999999998
No 50
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=2.5e-37 Score=323.68 Aligned_cols=305 Identities=17% Similarity=0.232 Sum_probs=238.2
Q ss_pred CCCCHHHHHHHHHHhCCC-CCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHH
Q 014742 41 GLESPWQFFCDSAKRIPN-NQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (419)
Q Consensus 41 ~~~tl~~~l~~~a~~~pd-~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~ 119 (419)
+..|+.+.|...++.+|+ ++++.+. +. +.+||+||.++++++|++|++. +++||+|+++++|++++++++
T Consensus 202 ~~~t~~~~l~~~~~~~p~~~~a~~~~---~~-----~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~ 272 (718)
T PRK08043 202 PRETLYEALLSAQYRYGAGKPCIEDV---NF-----TPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVI 272 (718)
T ss_pred CCCCHHHHHHHHHHHhCCCCcceEcC---CC-----CcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHH
Confidence 457899999999999998 5777532 11 4799999999999999999987 599999999999999999999
Q ss_pred HHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhh-cCccCCCCccEEEEecCCChhhHHHHHHhCcee
Q 014742 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILS-CLPRCCLYLKTIVSFANVSSSQKKEAEELGVSC 198 (419)
Q Consensus 120 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (419)
+||+++|++++|+++.++.+++.++++.++++++|++.+..+.... ........... +.+++....
T Consensus 273 lA~~~~G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~------------ 339 (718)
T PRK08043 273 FGASLRRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRW-VYLEDLKDD------------ 339 (718)
T ss_pred HHHHHcCCcccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhccccE-EEhhhhhhh------------
Confidence 9999999999999999999999999999999999998765432100 01111111222 222211000
Q ss_pred eeHHHH----HhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecC
Q 014742 199 FSWEEF----LQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLP 274 (419)
Q Consensus 199 ~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p 274 (419)
..+.+. ..............++++++++|||||||.||||++||.++...+......+ +++.+|++++.+|
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~-----~~~~~d~~l~~~P 414 (718)
T PRK08043 340 VTTADKLWIFAHLLMPRLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIA-----DFTPNDRFMSALP 414 (718)
T ss_pred cchhHHHHHHHHHhCCccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhh-----CCCccCeEEEcCc
Confidence 001000 0000001111234578999999999999999999999999998887766655 7888999999999
Q ss_pred hHHHHHHHH-HHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHh
Q 014742 275 LAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNY 351 (419)
Q Consensus 275 l~h~~g~~~-~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (419)
++|.+++.. ++.++..|+++++.+. +...+++.+.++++|+++++|+++..+.+.
T Consensus 415 l~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~---------------------- 472 (718)
T PRK08043 415 LFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARF---------------------- 472 (718)
T ss_pred chhhhhhHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhh----------------------
Confidence 999999876 7789999999999874 778889999999999999999998776431
Q ss_pred hhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 352 KLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
.+..++ ++||.+++||+++++++.+.|++.+|+++++.||+||
T Consensus 473 -----------------~~~~~~--------~~lr~i~~gg~~l~~~~~~~~~~~~g~~l~~~YG~TE 515 (718)
T PRK08043 473 -----------------ANPYDF--------ARLRYVVAGAEKLQESTKQLWQDKFGLRILEGYGVTE 515 (718)
T ss_pred -----------------cCcccc--------cceEEEEEeCccCCHHHHHHHHHHcCCCeecccCccc
Confidence 011122 3899999999999999999999999999999999998
No 51
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=8.7e-37 Score=312.33 Aligned_cols=312 Identities=20% Similarity=0.266 Sum_probs=240.8
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHH
Q 014742 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (419)
Q Consensus 43 ~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~ 122 (419)
.++.++|.++++.+|+++|+.+. + ..+||.||.++++++|++|.++|+++||+|+++++|++++++++|||
T Consensus 14 ~~~~~~l~~~~~~~p~~~Al~~~---~------~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~ 84 (579)
T PLN03102 14 LTPITFLKRASECYPNRTSIIYG---K------TRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAV 84 (579)
T ss_pred ccHHHHHHHHHHhCCCCeEEEEC---C------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHH
Confidence 57899999999999999999864 2 47999999999999999999999999999999999999999999999
Q ss_pred HHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCC----CCccEEEEecCCChhhHHHHHHhCcee
Q 014742 123 NSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCC----LYLKTIVSFANVSSSQKKEAEELGVSC 198 (419)
Q Consensus 123 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (419)
+++|++++|+++.++.+++.++++.+++++||++.+....+.+...... .....++.+++...... .....
T Consensus 85 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 159 (579)
T PLN03102 85 PMAGAVLNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPKR-----PSSEE 159 (579)
T ss_pred HhcCcEEeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEecccccccC-----Ccccc
Confidence 9999999999999999999999999999999998876654433221110 01123344432211000 00112
Q ss_pred eeHHHHHhcCCCC-C----CCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEec
Q 014742 199 FSWEEFLQLGTLD-C----ELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFL 273 (419)
Q Consensus 199 ~~~~~~~~~~~~~-~----~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 273 (419)
.+|.++....... . ......++++++|+|||||||.||+|+++|.++.......... ......+++++.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~-----~~~~~~~~~l~~~ 234 (579)
T PLN03102 160 LDYECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIG-----WEMGTCPVYLWTL 234 (579)
T ss_pred cCHHHHHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhh-----cCCCCCCeEEecC
Confidence 3455555433111 0 0112356899999999999999999999999976544332222 2455678899999
Q ss_pred ChHHHHHHHHHHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhh
Q 014742 274 PLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYK 352 (419)
Q Consensus 274 pl~h~~g~~~~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (419)
|++|.+++...+.++..|+++++.+. ++..+++.|+++++|++.++|.++..|.+...
T Consensus 235 pl~h~~g~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--------------------- 293 (579)
T PLN03102 235 PMFHCNGWTFTWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNS--------------------- 293 (579)
T ss_pred ChhhhcchhHHHHHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcc---------------------
Confidence 99999998877778889999988876 88999999999999999999999999865210
Q ss_pred hhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 353 LGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
.+.... .+++.+++||+++++.+.+++++ +|.++++.||+||
T Consensus 294 ----------------~~~~~~--------~~~~~~~~gg~~~~~~~~~~~~~-~g~~i~~~YG~tE 335 (579)
T PLN03102 294 ----------------LDLSPR--------SGPVHVLTGGSPPPAALVKKVQR-LGFQVMHAYGLTE 335 (579)
T ss_pred ----------------cccCCc--------ccceEEEECCCCCCHHHHHHHHH-cCCeEEeecCccc
Confidence 000001 26778899999999999999877 5999999999998
No 52
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1e-36 Score=309.78 Aligned_cols=319 Identities=20% Similarity=0.260 Sum_probs=251.2
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHH
Q 014742 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (419)
Q Consensus 40 ~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~ 119 (419)
....++.++|+.+++.+||++++.+. . .+..+++||.||.++++++|++|.+.|+++||+|+++++|++++++++
T Consensus 7 ~~~~~~~~~~~~~a~~~~~~~~~~~~---~--~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~ 81 (542)
T PRK06018 7 DWPLLCHRIIDHAARIHGNREVVTRS---V--EGPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAW 81 (542)
T ss_pred cCCCCHHHHHHHHHHhCCCceEEEee---c--cCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHH
Confidence 34569999999999999999999853 1 123468999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceee
Q 014742 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (419)
Q Consensus 120 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (419)
+||+++|++++|+++..+.+++.++++.+++++++++....+.+.+.... ...++.++...+..... ........
T Consensus 82 la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~ 156 (542)
T PRK06018 82 YGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADK-LPSVERYVVLTDAAHMP----QTTLKNAV 156 (542)
T ss_pred HHHHhcCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhh-CCCccEEEEeccccccc----ccCccccc
Confidence 99999999999999999999999999999999999998876665443322 23445555544321100 00001233
Q ss_pred eHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHH-HHh-hhhhhhhhhcCccCCCCcEEEEecChHH
Q 014742 200 SWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIV-AEV-LSVDQMFVVTGKVCSEEDTYFSFLPLAH 277 (419)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~-~~~-~~~~~~~~~~~~~~~~~d~~l~~~pl~h 277 (419)
.|.++..............++++++++|||||||.||+|.+||.+.+ ... ......+ ++..+|+++...|++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~-----~~~~~d~~~~~~p~~h 231 (542)
T PRK06018 157 AYEEWIAEADGDFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDAL-----GTSAADTMLPVVPLFH 231 (542)
T ss_pred cHHHHhccCCcccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhc-----CCCCCCEEEEecCHHH
Confidence 56666554422222334566889999999999999999999999743 222 2222233 6778899999999999
Q ss_pred HHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhh
Q 014742 278 IYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGN 355 (419)
Q Consensus 278 ~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (419)
.+++...+.++..|+++++... ++..+++.++++++|.+.++|+++..+.+....
T Consensus 232 ~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~----------------------- 288 (542)
T PRK06018 232 ANSWGIAFSAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEK----------------------- 288 (542)
T ss_pred HhhhHHHHhhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccc-----------------------
Confidence 9998877788999999998753 889999999999999999999999998653211
Q ss_pred hccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 356 MKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
. ..++ +++|.+++||+++++++.++|++ ++.++++.||+||
T Consensus 289 ----------~----~~~~--------~~lr~~~~~G~~l~~~~~~~~~~-~~~~~~~~YG~tE 329 (542)
T PRK06018 289 ----------E----GLKL--------PHLKMVVCGGSAMPRSMIKAFED-MGVEVRHAWGMTE 329 (542)
T ss_pred ----------c----CCCc--------ccceEEEEcCCCCCHHHHHHHHH-hCCCeEeeecccc
Confidence 0 0112 38999999999999999999999 8999999999998
No 53
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.7e-37 Score=314.38 Aligned_cols=310 Identities=17% Similarity=0.214 Sum_probs=247.0
Q ss_pred CCCCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHH
Q 014742 38 SPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWII 117 (419)
Q Consensus 38 ~~~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~ 117 (419)
.+....++.+.|.++++.+|+++|+++. + +.+||.||.++++++|.+|.+.|+++|++|+++++|++++++
T Consensus 32 ~~~~~~tl~~~l~~~a~~~p~~~Ai~~~---~------~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~ 102 (600)
T PRK08279 32 TPDSKRSLGDVFEEAAARHPDRPALLFE---D------QSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLA 102 (600)
T ss_pred CCCCcccHHHHHHHHHHhCCCCcEEEeC---C------CcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHH
Confidence 3356789999999999999999999975 3 479999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCce
Q 014742 118 AMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVS 197 (419)
Q Consensus 118 ~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (419)
+++||+++|++++|+++.++.+++.++++.++++++|++.+..+.+.+..... .....++..++.... .
T Consensus 103 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----------~ 171 (600)
T PRK08279 103 AWLGLAKLGAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADL-ARPPRLWVAGGDTLD----------D 171 (600)
T ss_pred HHHHHHhcCcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhh-cccceEEEecCcccc----------c
Confidence 99999999999999999999999999999999999999988766654433222 122233333221100 0
Q ss_pred eeeHHHHHhcC---CC--CCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEe
Q 014742 198 CFSWEEFLQLG---TL--DCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSF 272 (419)
Q Consensus 198 ~~~~~~~~~~~---~~--~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~ 272 (419)
...+.++.... .. ........++++++|+|||||||.||||.+||.++..++......+ +++++|++++.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~l~~~d~~l~~ 246 (600)
T PRK08279 172 PEGYEDLAAAAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLL-----RLTPDDVLYCC 246 (600)
T ss_pred cccHHHHhhhcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhc-----CCCCCcEEEEe
Confidence 11233333221 11 1122334568999999999999999999999999999998876666 88899999999
Q ss_pred cChHHHHHHHH-HHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHH
Q 014742 273 LPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYN 350 (419)
Q Consensus 273 ~pl~h~~g~~~-~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 350 (419)
+|++|.+++.. ++.++..|+++++.+. ++..+++.++++++|++.++|.+++.+++...
T Consensus 247 ~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~------------------- 307 (600)
T PRK08279 247 LPLYHNTGGTVAWSSVLAAGATLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPP------------------- 307 (600)
T ss_pred cCchhhhhHHHHHHHHHhcCcEEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCC-------------------
Confidence 99999999986 5567888999999877 99999999999999999999999988764100
Q ss_pred hhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCC-ceeeeccCCC
Q 014742 351 YKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGA-PLTQGYGMVE 419 (419)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~-~v~~~YG~tE 419 (419)
..... . .++|.+ +|+++++++.++|.+.++. .+++.||+||
T Consensus 308 ---------------~~~~~---~--------~~l~~~--~g~~l~~~~~~~~~~~~~~~~l~~~YG~tE 349 (600)
T PRK08279 308 ---------------KPTDR---D--------HRLRLM--IGNGLRPDIWDEFQQRFGIPRILEFYAASE 349 (600)
T ss_pred ---------------Ccccc---C--------cceeEE--ecCCCCHHHHHHHHHHhCcceeeeeecccc
Confidence 00000 1 267754 4778999999999999976 5999999998
No 54
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.2e-36 Score=309.34 Aligned_cols=309 Identities=22% Similarity=0.226 Sum_probs=254.8
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHH
Q 014742 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (419)
Q Consensus 40 ~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~ 119 (419)
...+|+.+.|..++..+|+++|+.+. + +.+||.||.+.++++|++|.+.|+++|++|+++++|++++++++
T Consensus 14 ~~~~n~~~~~~~~a~~~~~~~a~~~~---~------~~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~ 84 (542)
T PRK07786 14 ARRQNWVNQLARHALMQPDAPALRFL---G------NTTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESV 84 (542)
T ss_pred ccccCHHHHHHHHHHHCCCCeEEEeC---C------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHH
Confidence 45788999999999999999999865 3 47999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceee
Q 014742 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (419)
Q Consensus 120 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (419)
+||+++|++++|+++..+.+++..+++.+++++++++......+.. .....+..+.++..++... ....
T Consensus 85 ~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----------~~~~ 153 (542)
T PRK07786 85 LAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATA-VRDIVPLLSTVVVAGGSSD----------DSVL 153 (542)
T ss_pred HHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHH-hhhccCccceEEEecCCCc----------cccc
Confidence 9999999999999999999999999999999999999876654422 2223344555665543211 1234
Q ss_pred eHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccC-CCCcEEEEecChHHH
Q 014742 200 SWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVC-SEEDTYFSFLPLAHI 278 (419)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~-~~~d~~l~~~pl~h~ 278 (419)
+++++...............+++++++|||||||.||+|.++|+++...+......+ +. ..++++++.+|++|.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~p~~~~ 228 (542)
T PRK07786 154 GYEDLLAEAGPAHAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTN-----GADINSDVGFVGVPLFHI 228 (542)
T ss_pred CHHHHhhccCCCCCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhc-----CCCCCCceEEEecchHHH
Confidence 566665544222233344567899999999999999999999999998887765555 44 567899999999999
Q ss_pred HHHHHHHHHHhcCceEEEeC--C-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhh
Q 014742 279 YDQIIETHCIHKGCSIGFWR--G-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGN 355 (419)
Q Consensus 279 ~g~~~~l~~l~~G~~ivl~~--~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (419)
+|+..++.++..|+++++.+ . ++..+++.|+++++|.++++|.++..++.....
T Consensus 229 ~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~----------------------- 285 (542)
T PRK07786 229 AGIGSMLPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQA----------------------- 285 (542)
T ss_pred HHHHHHHHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCccc-----------------------
Confidence 99977889999999999875 2 899999999999999999999999998652110
Q ss_pred hccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhh-CCceeeeccCCC
Q 014742 356 MKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGMVE 419 (419)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~tE 419 (419)
. ... .++|.+++||+++++++++++++.+ +.++++.||+||
T Consensus 286 ----------~--~~~-----------~~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~~~YG~tE 327 (542)
T PRK07786 286 ----------R--PRD-----------LALRVLSWGAAPASDTLLRQMAATFPEAQILAAFGQTE 327 (542)
T ss_pred ----------C--ccC-----------cceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccc
Confidence 0 000 2799999999999999999999998 789999999998
No 55
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=1.4e-37 Score=305.88 Aligned_cols=302 Identities=26% Similarity=0.411 Sum_probs=228.7
Q ss_pred HHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCe
Q 014742 49 FCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAIT 128 (419)
Q Consensus 49 l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 128 (419)
|+++|+++||++|+++. ++ +.+||+|+.++++++|..|+++|+++|++|+++++|+++++++++||+++|++
T Consensus 1 f~~~a~~~pd~~a~~~~---~~-----~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~ 72 (417)
T PF00501_consen 1 FERQAQRYPDRIALIDD---EG-----RSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAI 72 (417)
T ss_dssp HHHHHHHSTTSEEEEET---TT-----EEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-E
T ss_pred ChhHHhhCCCceEEEEC---CC-----EEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeeccccccccc
Confidence 57899999999999971 23 68999999999999999999999999999999999999999999999999999
Q ss_pred EEeeccCCChhHHHHHHhhcCceEEEE----eCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeHHHH
Q 014742 129 YVPLYDTLGANAVEFIINHAEVSIAFV----QENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEF 204 (419)
Q Consensus 129 ~vpl~~~~~~~~l~~~l~~~~~~~vi~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (419)
++|+++.++.+++.++++.+++++||+ +......+..... .......++.++...... .+.+
T Consensus 73 ~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-------------~~~~ 138 (417)
T PF00501_consen 73 PVPLDPSLSEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFK-QEDPSSSIIILDRDDLPK-------------KEAL 138 (417)
T ss_dssp EEEEETTSSHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHT-TSTTTEEEEEESHSSCTT-------------CHHH
T ss_pred ccccccccccccccccccccceeEEEEeccccccccccchhhhc-cccccccccccccccccc-------------cccc
Confidence 999999999999999999999999998 1111112222211 112334555555332110 0001
Q ss_pred HhcC-CCCCCCCC-CCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHH-
Q 014742 205 LQLG-TLDCELPP-KKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ- 281 (419)
Q Consensus 205 ~~~~-~~~~~~~~-~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~- 281 (419)
.... ..... .. ..++++++++|||||||.||+|.++|+++...+..+. +.. ..+++ |++++.+|++|.+|+
T Consensus 139 ~~~~~~~~~~-~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~--~~~-~~~~~--d~~l~~~p~~~~~g~~ 212 (417)
T PF00501_consen 139 KSASLSDEPQ-SPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALA--LPE-YFGLG--DRILSFLPLSHIFGLI 212 (417)
T ss_dssp HHHHHCHCSH-STTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHH--HHH-TTTTT--TEEEESS-TTSHHHHH
T ss_pred cccccccccc-cCCCCccceeEeeccccccccccccccccccccccccccc--ccc-ccccC--ceEEeecccccccccc
Confidence 0000 00000 00 0568999999999999999999999999999988754 111 11333 699999999999999
Q ss_pred HHHHHHHhcCceEEEeCC-C---HHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhc
Q 014742 282 IIETHCIHKGCSIGFWRG-D---VRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (419)
Q Consensus 282 ~~~l~~l~~G~~ivl~~~-~---~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (419)
..++.++..|+++++++. + ++.+++.++++++|+++++|.++..+++..+.. .
T Consensus 213 ~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~-~---------------------- 269 (417)
T PF00501_consen 213 SALLAALFSGATLVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEK-T---------------------- 269 (417)
T ss_dssp HHHHHHHHCTSEEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTT-H----------------------
T ss_pred ccccccccccccccccccccccccccchhccccccccccccccccccccccccccc-c----------------------
Confidence 558999999999999987 3 577899999999999999999999997621100 0
Q ss_pred cCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCC-ceeeeccCCC
Q 014742 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGA-PLTQGYGMVE 419 (419)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~-~v~~~YG~tE 419 (419)
.....++ +++|.+++||+++++++.+++++.++. +|++.||+||
T Consensus 270 ----------~~~~~~l--------~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE 314 (417)
T PF00501_consen 270 ----------KISKKDL--------SSLRTVISGGEPLPPDLLRRLRKAFGNAPIINLYGSTE 314 (417)
T ss_dssp ----------HGTTTTG--------TT-SEEEEESST-CHHHHHHHHHHHTTSEEEEEEEEGG
T ss_pred ----------ccccccc--------ccccccccccccCChhhccccccccccccceecccccc
Confidence 0001123 379999999999999999999999987 9999999998
No 56
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-36 Score=308.03 Aligned_cols=315 Identities=19% Similarity=0.237 Sum_probs=243.3
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHH
Q 014742 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (419)
Q Consensus 40 ~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~ 119 (419)
....++.++|..+++.+|+++|+++. ++. +.+||.||.++++++|++|.+.|+++||+|+++++|++++++++
T Consensus 13 ~~~~~l~~~l~~~a~~~p~~~ai~~~---~~~----~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 85 (534)
T PRK05852 13 DFGPRIADLVEVAATRLPEAPALVVT---ADR----IAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFVVAL 85 (534)
T ss_pred hhcccHHHHHHHHHHhCCCCcEEEec---CCC----CcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHH
Confidence 45778999999999999999999864 332 47999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceee
Q 014742 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (419)
Q Consensus 120 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (419)
+||+++|++++|+++.++.+++.++++.++++++|++............ ...+..+.+....... . .....
T Consensus 86 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-----~-~~~~~ 156 (534)
T PRK05852 86 LAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTT---RWWPLTVNVGGDSGPS-----G-GTLSV 156 (534)
T ss_pred HHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhccccc---cccceeeeeccccccc-----c-ccccc
Confidence 9999999999999999999999999999999999998754322111110 0111112221110000 0 00000
Q ss_pred eHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHH
Q 014742 200 SWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (419)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~ 279 (419)
.+...... ...........++.++++|||||||.||||.++|+++...+......+ .+..+|++++.+|++|.+
T Consensus 157 ~~~~~~~~-~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~-----~~~~~d~~~~~~p~~~~~ 230 (534)
T PRK05852 157 HLDAATEP-TPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGY-----RLSPRDATVAVMPLYHGH 230 (534)
T ss_pred ccccccCC-CccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHh-----CCCCcceEEEecCcchhH
Confidence 01100000 001111122346789999999999999999999999999888876666 788899999999999999
Q ss_pred HHHH-HHHHHhcCceEEEeCC---CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhh
Q 014742 280 DQII-ETHCIHKGCSIGFWRG---DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGN 355 (419)
Q Consensus 280 g~~~-~l~~l~~G~~ivl~~~---~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (419)
++.. ++.++..|+++++++. ++..+++.|+++++|.++++|.++..|.+.....
T Consensus 231 g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~---------------------- 288 (534)
T PRK05852 231 GLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATE---------------------- 288 (534)
T ss_pred HHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccc----------------------
Confidence 9986 7788999999998653 8899999999999999999999999986531100
Q ss_pred hccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 356 MKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
....++ +++|.+.++|+++++++++.+.+.+|.++++.||+||
T Consensus 289 -------------~~~~~~--------~~lr~i~~~G~~~~~~~~~~~~~~~~~~v~~~YG~tE 331 (534)
T PRK05852 289 -------------PSGRKP--------AALRFIRSCSAPLTAETAQALQTEFAAPVVCAFGMTE 331 (534)
T ss_pred -------------cccccC--------CCeeEEEECCCCCCHHHHHHHHHHhCCChhhccCccc
Confidence 000011 3899999999999999999999999999999999998
No 57
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.2e-36 Score=315.85 Aligned_cols=319 Identities=20% Similarity=0.237 Sum_probs=241.4
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHH
Q 014742 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (419)
Q Consensus 42 ~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA 121 (419)
..|+.+.+..+ .+|+++|+++. + +.+..+.+||.||.++++++|+.|++.|+++||+|+++++|++++++++||
T Consensus 85 ~~n~~~~~~~~--~~~~~~Al~~~---~-~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~~lA 158 (655)
T PRK03584 85 RLNYAENLLRH--RRDDRPAIIFR---G-EDGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVAMLA 158 (655)
T ss_pred EeeHHHHhhcc--CCCCCeEEEEE---C-CCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 34565555443 58999999986 3 344557899999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCCh---------hhHhhcCccCCCCccEEEEecCCChhhHHHHH
Q 014742 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI---------PSILSCLPRCCLYLKTIVSFANVSSSQKKEAE 192 (419)
Q Consensus 122 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (419)
|+++|++++|+++.++.+++.+.++.++++++|+++... +.+.+.. .....+..++.++...... ..
T Consensus 159 ~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~---~~ 234 (655)
T PRK03584 159 TASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELR-AALPSLEHVVVVPYLGPAA---AA 234 (655)
T ss_pred HHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHH-hcCCCccEEEEEecCCCcc---cc
Confidence 999999999999999999999999999999999987532 2221211 1223444555554321100 00
Q ss_pred HhCceeeeHHHHHhcC-CCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHH-hhhhhhhhhhcCccCCCCcEEE
Q 014742 193 ELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAE-VLSVDQMFVVTGKVCSEEDTYF 270 (419)
Q Consensus 193 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~-~~~~~~~~~~~~~~~~~~d~~l 270 (419)
........|+++.... ...........+++++|+|||||||.||||+++|++++.. +......+ ++.++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-----~~~~~d~~~ 309 (655)
T PRK03584 235 AALPGALLWEDFLAPAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHC-----DLGPGDRFF 309 (655)
T ss_pred cccCCcccHHHHhhccccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhc-----CCCCCCEEE
Confidence 0011234566665422 2222233456789999999999999999999999987644 44433444 788899999
Q ss_pred EecChHHHHHHHHHHHHHhcCceEEEeCC-----CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHH
Q 014742 271 SFLPLAHIYDQIIETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLF 345 (419)
Q Consensus 271 ~~~pl~h~~g~~~~l~~l~~G~~ivl~~~-----~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~ 345 (419)
+..++.|..+. .++.+|..|+++++.++ ++..+++.++++++|++.++|++++.+.+.
T Consensus 310 ~~~~~~~~~~~-~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~---------------- 372 (655)
T PRK03584 310 WYTTCGWMMWN-WLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKA---------------- 372 (655)
T ss_pred EcCCchHHhHH-HHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhc----------------
Confidence 99999887543 45688999999999753 789999999999999999999999887541
Q ss_pred HHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhh--CCceeeeccCCC
Q 014742 346 EFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS--GAPLTQGYGMVE 419 (419)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~--~~~v~~~YG~tE 419 (419)
...+ ....+++ +||.+++||+++++++.+++.+.+ ++.+++.||+||
T Consensus 373 ------------------~~~~-~~~~~l~--------sLr~i~~~Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE 421 (655)
T PRK03584 373 ------------------GLVP-GETHDLS--------ALRTIGSTGSPLPPEGFDWVYEHVKADVWLASISGGTD 421 (655)
T ss_pred ------------------CCCc-cccCChh--------heEEEEEecCCCCHHHHHHHHHHhCCCceEEeccChHh
Confidence 0000 1112333 899999999999999999999988 478999999998
No 58
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=3e-36 Score=304.74 Aligned_cols=315 Identities=19% Similarity=0.227 Sum_probs=249.1
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHH
Q 014742 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (419)
Q Consensus 42 ~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA 121 (419)
.+++.++|+..++++||++|+.+. + ..++++.+||.||.++++++|++|.++|+++||+|+++++|+.+++++++|
T Consensus 6 ~~~l~~~~~~~a~~~p~~~a~~~~---~-~~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la 81 (517)
T PRK08008 6 GQHLRQMWDDLADVYGHKTALIFE---S-SGGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFG 81 (517)
T ss_pred cccHHHHHHHHHHHCCCceEEEcc---c-CCCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 568999999999999999999875 4 234457899999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeH
Q 014742 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (419)
Q Consensus 122 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (419)
|+++|++++|+++..+.+++.++++.++++++|++.+..+.+.+.........+.++..+..... .....++
T Consensus 82 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ 153 (517)
T PRK08008 82 LAKIGAIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVALPA--------DDGVSSF 153 (517)
T ss_pred HHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCCcc--------cccccCH
Confidence 99999999999999999999999999999999999987766554433333345555555442110 0123345
Q ss_pred HHHHhcCC-CCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHH
Q 014742 202 EEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYD 280 (419)
Q Consensus 202 ~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g 280 (419)
+++..... .........++++++++|||||||.||+|+++|.++.......... ..+..++++++.+|++|..+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~-----~~~~~~~~~~~~~p~~~~~~ 228 (517)
T PRK08008 154 TQLKAQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQ-----CALRDDDVYLTVMPAFHIDC 228 (517)
T ss_pred HHHhccCCccccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhh-----cCCCCCCeEEEecCcHHHHH
Confidence 54433321 1112234456899999999999999999999999998654332221 25678899999999999877
Q ss_pred HHH-HHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhcc
Q 014742 281 QII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKK 358 (419)
Q Consensus 281 ~~~-~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (419)
... ++.++..|+++++.++ ++..+++.++++++|++.++|.+++.++...
T Consensus 229 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~---------------------------- 280 (517)
T PRK08008 229 QCTAAMAAFSAGATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQP---------------------------- 280 (517)
T ss_pred HHHHHHHHHhcCcEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCC----------------------------
Confidence 765 7788999999999987 9999999999999999999999998875410
Q ss_pred CCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 359 GMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 359 ~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
..+... . ++++.+..+ .++++++...|.+.+|.++++.||+||
T Consensus 281 ------~~~~~~---~--------~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~YG~tE 323 (517)
T PRK08008 281 ------PSANDR---Q--------HCLREVMFY-LNLSDQEKDAFEERFGVRLLTSYGMTE 323 (517)
T ss_pred ------Cccccc---c--------ccceeeEEe-cCCCHHHHHHHHHHhCCeEEeeccccc
Confidence 000000 1 267777665 478999999999989999999999998
No 59
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=7e-37 Score=311.77 Aligned_cols=305 Identities=17% Similarity=0.222 Sum_probs=237.8
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeccCCCC----CceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHH
Q 014742 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKV----GPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWII 117 (419)
Q Consensus 42 ~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~----~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~ 117 (419)
..++.+.|...++.+|+++|+++. ++.+ ..++.+||.||.++++++|++|.+.|+++||+|+++++|++++++
T Consensus 5 ~~~~~~~l~~~a~~~p~~~a~~~~---~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~ 81 (552)
T PRK09274 5 MANIARHLPRAAQERPDQLAVAVP---GGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFA 81 (552)
T ss_pred hhhHHHHHHHHHHhCCCcceEEec---cCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHH
Confidence 467889999999999999999875 3311 123479999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCC--hhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhC
Q 014742 118 AMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK--IPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELG 195 (419)
Q Consensus 118 ~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (419)
+++||+++|++++|+++.++.+++.++++.++++++|++... ...+.... ......++.++....
T Consensus 82 ~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~---------- 148 (552)
T PRK09274 82 LTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGWG---KPSVRRLVTVGGRLL---------- 148 (552)
T ss_pred HHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhccC---ccchhheeccccccc----------
Confidence 999999999999999999999999999999999999997521 11111110 112223333322100
Q ss_pred ceeeeHHHHHhcC-CCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecC
Q 014742 196 VSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLP 274 (419)
Q Consensus 196 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p 274 (419)
.....++++.... ..........++++++++|||||||.||+|.++|+++...+......+ ++.++|++++.+|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~~~~~p 223 (552)
T PRK09274 149 WGGTTLATLLRDGAAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDY-----GIEPGEIDLPTFP 223 (552)
T ss_pred cCCccHHHhcccCccccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHh-----CCCCCceeeeccC
Confidence 0122344443222 122223344678999999999999999999999999999888876666 7888999999999
Q ss_pred hHHHHHHHHHHHHHhcCceEEEeC-------C-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHH
Q 014742 275 LAHIYDQIIETHCIHKGCSIGFWR-------G-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFE 346 (419)
Q Consensus 275 l~h~~g~~~~l~~l~~G~~ivl~~-------~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~ 346 (419)
++|.+++ ..|+++++.+ . ++..+++.|+++++|+++++|.+++.|.+....
T Consensus 224 l~~~~~~-------~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~-------------- 282 (552)
T PRK09274 224 LFALFGP-------ALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEA-------------- 282 (552)
T ss_pred HHHhhhh-------hhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhh--------------
Confidence 9887653 4578887754 2 789999999999999999999999998763211
Q ss_pred HHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhh--CCceeeeccCCC
Q 014742 347 FAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS--GAPLTQGYGMVE 419 (419)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~--~~~v~~~YG~tE 419 (419)
...++ +++|.+++||+++++++.+++++.+ |+++++.||+||
T Consensus 283 -----------------------~~~~~--------~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE 326 (552)
T PRK09274 283 -----------------------NGIKL--------PSLRRVISAGAPVPIAVIERFRAMLPPDAEILTPYGATE 326 (552)
T ss_pred -----------------------cCCCC--------chhhEEEecCCcCCHHHHHHHHHHcCCCceEEccccccc
Confidence 01122 3899999999999999999999998 469999999998
No 60
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.8e-36 Score=303.36 Aligned_cols=295 Identities=22% Similarity=0.276 Sum_probs=240.9
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHh-CCCCCCCeEEEEcCCchhHHHHHHH
Q 014742 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRS-RGVNPGDRCGIYGSNCPEWIIAMEA 121 (419)
Q Consensus 43 ~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~-~g~~~gd~V~l~~~n~~~~~~~~lA 121 (419)
..+.++|...++.+||++|+.+. + +.+||.||.++++++|++|++ .|+.+|++|+++++|+++++++++|
T Consensus 2 ~~~~~~~~~~a~~~p~~~a~~~~----~-----~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la 72 (496)
T PRK06839 2 QGIAYWIEKRAYLHPDRIAIITE----E-----EEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFA 72 (496)
T ss_pred ccHHHHHHHHHHHCCCCeEEEEC----C-----ceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 46789999999999999999863 3 589999999999999999985 7999999999999999999999999
Q ss_pred HHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeH
Q 014742 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (419)
Q Consensus 122 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (419)
|+++|++++|+++..+.+++..+++.++++++++++.....+..... . .....++.+.+ +
T Consensus 73 ~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~-~-~~~~~~~~~~~------------------~ 132 (496)
T PRK06839 73 IAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQK-V-SYVQRVISITS------------------L 132 (496)
T ss_pred HHhcCcEEEecCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhh-c-cCcceEEEecc------------------h
Confidence 99999999999999999999999999999999998766544432211 1 12223333321 2
Q ss_pred HHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHH
Q 014742 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (419)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~ 281 (419)
.++.... ........++++++++|||||||.||+|.++|.++..........+ +...+|++++.+|++|.+++
T Consensus 133 ~~~~~~~--~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~g~ 205 (496)
T PRK06839 133 KEIEDRK--IDNFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAI-----DLTMHDRSIVLLPLFHIGGI 205 (496)
T ss_pred HhhhccC--CCCCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHc-----CCCCCCeEEEeeCCcchhhH
Confidence 2222211 1122234568899999999999999999999999977665544444 67789999999999999998
Q ss_pred HH-HHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccC
Q 014742 282 II-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKG 359 (419)
Q Consensus 282 ~~-~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (419)
.. ++.++..|+++++++. ++..+++.++++++|++.++|.+++.+++...
T Consensus 206 ~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~---------------------------- 257 (496)
T PRK06839 206 GLFAFPTLFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSK---------------------------- 257 (496)
T ss_pred HHHHHHHHhcCcEEEEccCCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcc----------------------------
Confidence 76 6788999999998876 99999999999999999999999999865210
Q ss_pred CCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 360 MPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 360 ~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
....++ .++|.+++||+++++++.+.+++. |+++++.||+||
T Consensus 258 ---------~~~~~~--------~~lr~~~~gG~~~~~~~~~~~~~~-g~~~~~~YG~tE 299 (496)
T PRK06839 258 ---------FETTNL--------QSVRWFYNGGAPCPEELMREFIDR-GFLFGQGFGMTE 299 (496)
T ss_pred ---------cccCCC--------cccceEEECCCCCCHHHHHHHHHh-CCeeEeeccCCC
Confidence 111112 389999999999999999999996 999999999998
No 61
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3e-36 Score=305.51 Aligned_cols=309 Identities=18% Similarity=0.215 Sum_probs=245.0
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHH
Q 014742 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (419)
Q Consensus 40 ~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~ 119 (419)
....|+.++|...++.+|+++++.+. + +.+||.||.++++++|+.|++.|+++|++|+++++|++++++++
T Consensus 4 ~~~~~~~~~~~~~a~~~p~~~a~~~~---~------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~ 74 (528)
T PRK07470 4 RRVMNLAHFLRQAARRFPDRIALVWG---D------RSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESM 74 (528)
T ss_pred ccCCCHHHHHHHHHHHCCCceEEEEC---C------ccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHH
Confidence 45678999999999999999999864 2 47999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceee
Q 014742 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (419)
Q Consensus 120 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (419)
+||+++|++++|+++.++.+++.++++.+++++++++.+......... ........++.+..... ..
T Consensus 75 lA~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------------~~ 141 (528)
T PRK07470 75 FAAFRLGAVWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVR-AASPDLTHVVAIGGARA------------GL 141 (528)
T ss_pred HHHHhCCeEEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHH-hhCCcCceEEEeCCCcc------------cc
Confidence 999999999999999999999999999999999999987654433221 11223344444443211 23
Q ss_pred eHHHHHhcC-CCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHH
Q 014742 200 SWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHI 278 (419)
Q Consensus 200 ~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~ 278 (419)
.++++.... ..........++++++|+|||||||.||+|.++|+++...+......+ ..+....|+++..+|++|.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~---~~~~~~~d~~l~~~p~~~~ 218 (528)
T PRK07470 142 DYEALVARHLGARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADL---MPGTTEQDASLVVAPLSHG 218 (528)
T ss_pred cHHHHHhcCCCCCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHh---ccCCCcccEEEEeccchhH
Confidence 455554433 222223345678999999999999999999999999976554322211 1145678999999999999
Q ss_pred HHHHHHHHHHhcCceEEEeCC---CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhh
Q 014742 279 YDQIIETHCIHKGCSIGFWRG---DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGN 355 (419)
Q Consensus 279 ~g~~~~l~~l~~G~~ivl~~~---~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (419)
+++..++ .++.|++.++.+. +++.+++.|+++++|.+.++|.+++.+.+.
T Consensus 219 ~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-------------------------- 271 (528)
T PRK07470 219 AGIHQLC-QVARGAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEH-------------------------- 271 (528)
T ss_pred HHHHHHH-HHhcCceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhC--------------------------
Confidence 9987544 5677888777653 899999999999999999999999988641
Q ss_pred hccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 356 MKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
+..+..++ +++|.+++||+++++...+++.+.+|.++++.||+||
T Consensus 272 -----------~~~~~~~~--------~~lr~~~~gG~~l~~~~~~~~~~~~g~~~~~~YG~TE 316 (528)
T PRK07470 272 -----------PAVDRYDH--------SSLRYVIYAGAPMYRADQKRALAKLGKVLVQYFGLGE 316 (528)
T ss_pred -----------cCcCCCCC--------cceEEEEEcCCCCCHHHHHHHHHHhCcHHHHhCCCcc
Confidence 10111112 3899999999999999999999988999999999998
No 62
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.9e-36 Score=301.64 Aligned_cols=288 Identities=15% Similarity=0.166 Sum_probs=235.8
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHH
Q 014742 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (419)
Q Consensus 43 ~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~ 122 (419)
+++.+.|.++++.+||++|+.+. + ..+||.||.++++++|++|.+.|. +|++|+++++|+++++++++||
T Consensus 1 ~~~~~~~~~~a~~~p~~~a~~~~---~------~~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~~~~~~~~~~~~la~ 70 (487)
T PRK07638 1 MGITKEYKKHASLQPNKIAIKEN---D------RVLTYKDWFESVCKVANWLNEKES-KNKTIAILLENRIEFLQLFAGA 70 (487)
T ss_pred CChHHHHHHHHHhCCCCeEEecC---C------cEeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCHHHHHHHHHH
Confidence 46889999999999999999864 3 479999999999999999999884 7999999999999999999999
Q ss_pred HHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeHH
Q 014742 123 NSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWE 202 (419)
Q Consensus 123 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (419)
+++|++++|+++.++.+++.+++..++++++|++......+... ...++..++ +.
T Consensus 71 ~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~-------~~~~~~~~~------------------~~ 125 (487)
T PRK07638 71 AMAGWTCVPLDIKWKQDELKERLAISNADMIVTERYKLNDLPDE-------EGRVIEIDE------------------WK 125 (487)
T ss_pred HHcCeEEEecCccCCHHHHHHHHHhCCCCEEEEecccccchhhc-------cceEEEehh------------------hh
Confidence 99999999999999999999999999999999998655433211 012222211 11
Q ss_pred HHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHH
Q 014742 203 EFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQI 282 (419)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~ 282 (419)
+................+++++|+|||||||.||||+++|++++.++......+ .+..+|+++...|++|.+++.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~d~~~~~~~l~~~~~l~ 200 (487)
T PRK07638 126 RMIEKYLPTYAPIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDF-----HMKREDSVLIAGTLVHSLFLY 200 (487)
T ss_pred hhhhhccccccccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-----CcCCCCEEEEeecchHHHHHH
Confidence 111111111111223356789999999999999999999999998888765555 788899999999999998877
Q ss_pred HHHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccCCC
Q 014742 283 IETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMP 361 (419)
Q Consensus 283 ~~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (419)
.++.+++.|+++++.+. ++..+++.|+++++|++.++|.++..+.+.
T Consensus 201 ~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-------------------------------- 248 (487)
T PRK07638 201 GAISTLYVGQTVHLMRKFIPNQVLDKLETENISVMYTVPTMLESLYKE-------------------------------- 248 (487)
T ss_pred HHHHHHccCcEEEEcCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhC--------------------------------
Confidence 78889999999999877 999999999999999999999999998651
Q ss_pred CCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhh-CCceeeeccCCC
Q 014742 362 QNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGMVE 419 (419)
Q Consensus 362 ~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~tE 419 (419)
.... .+.+.++++|+++++++.+++++.+ +.++++.||+||
T Consensus 249 -----~~~~------------~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~tE 290 (487)
T PRK07638 249 -----NRVI------------ENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYGASE 290 (487)
T ss_pred -----cCcC------------CceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEecCCc
Confidence 0000 1455577889999999999999998 789999999998
No 63
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=7e-36 Score=303.68 Aligned_cols=334 Identities=22% Similarity=0.339 Sum_probs=251.1
Q ss_pred cceec-CccCCCCCCCCCCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCC
Q 014742 24 PVYRC-IYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPG 102 (419)
Q Consensus 24 ~~~~~-~~~~~~~~~~~~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g 102 (419)
..||. .+|+ ++....++.++|.++++.+|+++|+.+. + +.+||.||.++++++|.+|.+.|+++|
T Consensus 6 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~p~~~a~~~~---~------~~~ty~el~~~~~~~a~~L~~~gi~~g 71 (541)
T TIGR03205 6 QFYPEGVRWD-----ATIARGTLPDLLSKAAADYGPRPALEFR---D------RPITYTELEAMAETAAAALLRAGYGKD 71 (541)
T ss_pred cccCCCCCcc-----cCCCCCCHHHHHHHHHHHcCCCceEEEC---C------cEeeHHHHHHHHHHHHHHHHHcCCCCC
Confidence 34555 7775 3345668999999999999999999864 2 479999999999999999999999999
Q ss_pred CeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCC--hhhHhhcCccCCCCccEEEEe
Q 014742 103 DRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK--IPSILSCLPRCCLYLKTIVSF 180 (419)
Q Consensus 103 d~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~--~~~~~~~~~~~~~~~~~~~~~ 180 (419)
|+|+++++|+++++++++||+++|++++|+++..+.+++.++++.++++++|+++.. .....+.... ..+..+++.
T Consensus 72 ~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~--~~~~~~~~~ 149 (541)
T TIGR03205 72 ASVALYLGNTPDHPINFFGALKAGARVVHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEK--GLLDRLIVC 149 (541)
T ss_pred CEEEEECCCChHHHHHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhc--ccceEEEEe
Confidence 999999999999999999999999999999999999999999999999999998631 1112121111 123344443
Q ss_pred cCCChhhHHH--H-HHhCceeeeHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhh
Q 014742 181 ANVSSSQKKE--A-EELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFV 257 (419)
Q Consensus 181 ~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~ 257 (419)
+......... . ........+++++..............++++++++|||||||.||+|+++|.++....... ..+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~-~~~~ 228 (541)
T TIGR03205 150 EDDNWGKVGTPQAPIPADPRIVTYADFVKGAAAPAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIY-DVWG 228 (541)
T ss_pred cccccccccccccccCCCcccccHHHHHhcCCCCCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHH-Hhhc
Confidence 3221000000 0 0001124456666554322222334567899999999999999999999999987654321 1110
Q ss_pred -hcCccCCCCcEEEEecChHHHHHHHH-HHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHh
Q 014742 258 -VTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKI 334 (419)
Q Consensus 258 -~~~~~~~~~d~~l~~~pl~h~~g~~~-~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~ 334 (419)
.........+++++.+|++|.+++.. ++.++..|+++++... ++..+++.|+++++|++.++|.++..+.+.
T Consensus 229 ~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~----- 303 (541)
T TIGR03205 229 KPSRATRGDVERVICVLPLFHIYALTVILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALAND----- 303 (541)
T ss_pred ccccccCCCCceEEEeccHHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhC-----
Confidence 00112234578999999999999876 6778999999988876 999999999999999999999999887541
Q ss_pred hccCchHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeee
Q 014742 335 SSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQG 414 (419)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~ 414 (419)
+.....++ .++|.+++||+++++++.+++.+.++.++++.
T Consensus 304 --------------------------------~~~~~~~~--------~~l~~i~~gg~~~~~~~~~~~~~~~~~~~~~~ 343 (541)
T TIGR03205 304 --------------------------------PSLEKRDL--------SSLATIGSGGAPLPVEVANFFERKTGLKLKSG 343 (541)
T ss_pred --------------------------------ccccccCc--------cccceEEEccccCCHHHHHHHHHHhCCCeecc
Confidence 00111122 28999999999999999999999889999999
Q ss_pred ccCCC
Q 014742 415 YGMVE 419 (419)
Q Consensus 415 YG~tE 419 (419)
||+||
T Consensus 344 YG~TE 348 (541)
T TIGR03205 344 WGMTE 348 (541)
T ss_pred ccccc
Confidence 99998
No 64
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=5.7e-36 Score=301.73 Aligned_cols=302 Identities=21% Similarity=0.349 Sum_probs=246.1
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHH
Q 014742 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (419)
Q Consensus 42 ~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA 121 (419)
..++.++|...+ .+|+++++... ++ +.+||.||.++++++|..|++.|+++||+|+++++|+++++++++|
T Consensus 2 ~~~l~~~~~~~~-~~~~~~a~~~~---~~-----~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la 72 (504)
T PRK07514 2 NNNLFDALRAAF-ADRDAPFIETP---DG-----LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLA 72 (504)
T ss_pred CccHHHHHHHHh-hCCCCeEEEeC---CC-----CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 467899999999 99999999864 33 5899999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeH
Q 014742 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (419)
Q Consensus 122 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (419)
|+++|++++|+++..+.+++..+++.+++++++++......+....... ....++.++.... ..+
T Consensus 73 ~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-------------~~~ 137 (504)
T PRK07514 73 TLRAGAVFLPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAA--GAPHVETLDADGT-------------GSL 137 (504)
T ss_pred HHHcCcEEEECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhcc--CCceEEEecCCCc-------------ccH
Confidence 9999999999999999999999999999999999987766554432211 2222444433211 112
Q ss_pred HHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHH
Q 014742 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (419)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~ 281 (419)
.+...............++++++++|||||||.||+|.++|.++...+......+ ++..+|++++.+|++|.+++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~g~ 212 (504)
T PRK07514 138 LEAAAAAPDDFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYW-----RFTPDDVLIHALPIFHTHGL 212 (504)
T ss_pred HHhhhhcCcccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHh-----CCCCccEEEEecchHHHHHH
Confidence 2222111111222344678999999999999999999999999999887766655 78889999999999999998
Q ss_pred HH-HHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccC
Q 014742 282 II-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKG 359 (419)
Q Consensus 282 ~~-~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (419)
.. ++.++..|+++++.+. ++..+++.+ .++|.+.++|.++.++++.
T Consensus 213 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~i--~~~t~~~~~P~~~~~l~~~------------------------------ 260 (504)
T PRK07514 213 FVATNVALLAGASMIFLPKFDPDAVLALM--PRATVMMGVPTFYTRLLQE------------------------------ 260 (504)
T ss_pred HHHHHHHHhcCcEEEECCCCCHHHHHHHH--HhheeeecHHHHHHHHHcC------------------------------
Confidence 76 7788999999999887 999999999 4799999999999988641
Q ss_pred CCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 360 MPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 360 ~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
+..+...+ +++|.+++||+++++++.+.|++.++.++++.||+||
T Consensus 261 -------~~~~~~~~--------~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE 305 (504)
T PRK07514 261 -------PRLTREAA--------AHMRLFISGSAPLLAETHREFQERTGHAILERYGMTE 305 (504)
T ss_pred -------CCCCcccc--------cceeeEEecCCCCCHHHHHHHHHHhCCcceeeccccc
Confidence 11111122 3899999999999999999999999999999999998
No 65
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.5e-36 Score=304.72 Aligned_cols=319 Identities=20% Similarity=0.297 Sum_probs=242.9
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHh-CCCCCCCeEEEEcCCchhHHHHHH
Q 014742 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRS-RGVNPGDRCGIYGSNCPEWIIAME 120 (419)
Q Consensus 42 ~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~-~g~~~gd~V~l~~~n~~~~~~~~l 120 (419)
..|+.+.|...++.+|+++|+++. + +.+||.||.++++++|+.|.+ .|+++||+|+++++|++++++++|
T Consensus 23 ~~~~~~~l~~~a~~~p~~~al~~~----~-----~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~l 93 (562)
T PRK05677 23 YPNIQAVLKQSCQRFADKPAFSNL----G-----KTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVF 93 (562)
T ss_pred cCcHHHHHHHHHHhCCCCeeEEEC----C-----ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHH
Confidence 468999999999999999999864 3 479999999999999999997 699999999999999999999999
Q ss_pred HHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCC--h-hhHHHHH-----
Q 014742 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVS--S-SQKKEAE----- 192 (419)
Q Consensus 121 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~----- 192 (419)
||+++|++++|+++..+.+++.++++.++++++|++......+.+.... ...+.++..+... . .......
T Consensus 94 a~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (562)
T PRK05677 94 GAMRAGLIVVNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPK--TGVKHVIVTEVADMLPPLKRLLINAVVKH 171 (562)
T ss_pred HHHHcCeEEeecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhc--cCcceeEEecccccccchhhhhcccchhh
Confidence 9999999999999999999999999999999999987765544333221 1233333322110 0 0000000
Q ss_pred ------H-hCceeeeHHHHHhcC-CCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCC
Q 014742 193 ------E-LGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCS 264 (419)
Q Consensus 193 ------~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~ 264 (419)
. .......+.+..... ..........++++++++|||||||.||||.++|.++...+......+ .....
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~---~~~~~ 248 (562)
T PRK05677 172 VKKMVPAYHLPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALM---GSNLN 248 (562)
T ss_pred ccccccccCCcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHh---ccCCC
Confidence 0 000122344443332 111222234578999999999999999999999999988766554433 11222
Q ss_pred -CCcEEEEecChHHHHHHHH-HHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCch
Q 014742 265 -EEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGAL 340 (419)
Q Consensus 265 -~~d~~l~~~pl~h~~g~~~-~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~ 340 (419)
..+++++.+|++|.+++.. ++..+..|++.++.+. ++..+++.|+++++|.++++|.++..++..
T Consensus 249 ~~~~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~----------- 317 (562)
T PRK05677 249 EGCEILIAPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNN----------- 317 (562)
T ss_pred CCccEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhC-----------
Confidence 3468899999999999876 6677888888777654 899999999999999999999999887641
Q ss_pred HHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 341 SKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
......++ .++|.+++||+++++++.+.|++.+|+++++.||+||
T Consensus 318 --------------------------~~~~~~~~--------~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE 362 (562)
T PRK05677 318 --------------------------EAFRKLDF--------SALKLTLSGGMALQLATAERWKEVTGCAICEGYGMTE 362 (562)
T ss_pred --------------------------cccccCCh--------hhceEEEEcCccCCHHHHHHHHHHcCCCeeccCCccc
Confidence 00111122 2899999999999999999999988999999999998
No 66
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-36 Score=317.29 Aligned_cols=285 Identities=18% Similarity=0.228 Sum_probs=232.7
Q ss_pred CCHHHHHHHHHHh--CCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHH
Q 014742 43 ESPWQFFCDSAKR--IPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (419)
Q Consensus 43 ~tl~~~l~~~a~~--~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~l 120 (419)
.|+.++|.+.+.. +||++|++.. ..+||.||.++++++|+.|++.|+++|++|+++++|+++++++++
T Consensus 4 ~~~~~~~~~~a~~~~~pd~~a~~~~----------~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~l 73 (705)
T PRK06060 4 GNLAGLLAEQASEAGWYDRPAFYAA----------DVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLL 73 (705)
T ss_pred cCHHHHHHHHHhhccCCCceEEEec----------CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 3788999988886 7999999742 259999999999999999999999999999999999999999999
Q ss_pred HHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeee
Q 014742 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (419)
Q Consensus 121 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (419)
||+++|++++|+++.++.+++.++++.++++++|++....+.+... .++ .
T Consensus 74 a~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~---------~~~---------------------~ 123 (705)
T PRK06060 74 ACLARGVMAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQPS---------RVA---------------------E 123 (705)
T ss_pred HHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhccc---------ccc---------------------h
Confidence 9999999999999999999999999999999999987544322110 000 0
Q ss_pred HHHHHhcC--CCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhh-hhhhhcCccCCCCcEEEEecChHH
Q 014742 201 WEEFLQLG--TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD-QMFVVTGKVCSEEDTYFSFLPLAH 277 (419)
Q Consensus 201 ~~~~~~~~--~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~-~~~~~~~~~~~~~d~~l~~~pl~h 277 (419)
..++.... ..........++++++++|||||||.||||+++|.++...+..+. ..+ .+...|++++..|++|
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~-----~~~~~d~~l~~~~~~~ 198 (705)
T PRK06060 124 AAELMSEAARVAPGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKAL-----RLTPEDTGLCSARMYF 198 (705)
T ss_pred hhhhhhhccccCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhh-----CCCCcceeEEeccchh
Confidence 00111110 011111234568899999999999999999999999988776543 234 6778899999999999
Q ss_pred HHHHHH-HHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhh
Q 014742 278 IYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLG 354 (419)
Q Consensus 278 ~~g~~~-~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (419)
.+++.. ++.++..|+++++.+. ++..++..+.++++|+++++|.++.++++...
T Consensus 199 ~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~----------------------- 255 (705)
T PRK06060 199 AYGLGNSVWFPLATGGSAVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCS----------------------- 255 (705)
T ss_pred hcchhHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcc-----------------------
Confidence 988864 7788999999999874 88889999999999999999999998865210
Q ss_pred hhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhh-CCceeeeccCCC
Q 014742 355 NMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGMVE 419 (419)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~tE 419 (419)
...+ .++|.+++||+++++++.+++.+.+ ++++++.||+||
T Consensus 256 ----------------~~~~--------~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~YG~tE 297 (705)
T PRK06060 256 ----------------PDSF--------RSLRCVVSAGEALELGLAERLMEFFGGIPILDGIGSTE 297 (705)
T ss_pred ----------------cccc--------cceeEEEEecCcCCHHHHHHHHHHcCCCceEeeeeccc
Confidence 0012 2899999999999999999999988 589999999998
No 67
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.9e-36 Score=304.46 Aligned_cols=313 Identities=23% Similarity=0.363 Sum_probs=246.9
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHH
Q 014742 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (419)
Q Consensus 40 ~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~ 119 (419)
....++.++|.+.++++|+++|+++. +.+ +.+||.||.++++++|++|.+.|+++|++|+++++|++++++++
T Consensus 15 ~~~~~l~~~l~~~~~~~p~~~a~~~~---~~~----~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~ 87 (558)
T PRK12583 15 LLTQTIGDAFDATVARFPDREALVVR---HQA----LRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQ 87 (558)
T ss_pred cccCcHHHHHHHHHHHCCCCeEEEec---CCC----cEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHH
Confidence 34568999999999999999999864 332 57999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChh-----hHhhcCc------------cCCCCccEEEEecC
Q 014742 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP-----SILSCLP------------RCCLYLKTIVSFAN 182 (419)
Q Consensus 120 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-----~~~~~~~------------~~~~~~~~~~~~~~ 182 (419)
+||+++|++++|+++..+.+++..+++.++++++|++..... .+..... ...+.+..++..+.
T Consensus 88 ~a~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (558)
T PRK12583 88 FATARIGAILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAP 167 (558)
T ss_pred HHHHhhCCEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecC
Confidence 999999999999999999999999999999999999865321 1111000 01122233333332
Q ss_pred CChhhHHHHHHhCceeeeHHHHHhcCCC------CCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhh
Q 014742 183 VSSSQKKEAEELGVSCFSWEEFLQLGTL------DCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMF 256 (419)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~ 256 (419)
... .....|+++...... ........++++++++|||||||.||+|.++|.++..++......+
T Consensus 168 ~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~ 237 (558)
T PRK12583 168 APP----------PGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESL 237 (558)
T ss_pred CCC----------ccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHh
Confidence 211 123345444332210 1112234578899999999999999999999999998888766666
Q ss_pred hhcCccCCCCcEEEEecChHHHHHHHH-HHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHH
Q 014742 257 VVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNK 333 (419)
Q Consensus 257 ~~~~~~~~~~d~~l~~~pl~h~~g~~~-~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~ 333 (419)
++..+|++++.+|++|.+|... ++.++..|++++++.. ++..+++.++++++|++.++|.++..++....
T Consensus 238 -----~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~-- 310 (558)
T PRK12583 238 -----GLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQ-- 310 (558)
T ss_pred -----CCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcccc--
Confidence 7888999999999999999876 7788999999997654 89999999999999999999999987654100
Q ss_pred hhccCchHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhC-Ccee
Q 014742 334 ISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG-APLT 412 (419)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~-~~v~ 412 (419)
....++ +++|.+++||+++++++.+++.+.++ ..++
T Consensus 311 -----------------------------------~~~~~~--------~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~ 347 (558)
T PRK12583 311 -----------------------------------RGNFDL--------SSLRTGIMAGAPCPIEVMRRVMDEMHMAEVQ 347 (558)
T ss_pred -----------------------------------ccCCCc--------hhheEEEecCCCCCHHHHHHHHHHcCCccee
Confidence 011112 28999999999999999999999886 4699
Q ss_pred eeccCCC
Q 014742 413 QGYGMVE 419 (419)
Q Consensus 413 ~~YG~tE 419 (419)
+.||+||
T Consensus 348 ~~YG~tE 354 (558)
T PRK12583 348 IAYGMTE 354 (558)
T ss_pred ccccccc
Confidence 9999998
No 68
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.8e-37 Score=280.86 Aligned_cols=309 Identities=18% Similarity=0.201 Sum_probs=266.6
Q ss_pred CCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHH
Q 014742 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (419)
Q Consensus 41 ~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~l 120 (419)
..+++.+.|...|.++||++|+++. + +.+||.+|+++++++|.+|++.|+++||+|.+.+||..+|++.+|
T Consensus 26 ~d~~l~d~L~~~A~~~pdriAv~d~-----~----~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~F 96 (542)
T COG1021 26 QDRTLTDILTDHAARYPDRIAVIDG-----E----RRLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFF 96 (542)
T ss_pred cCCcHHHHHHHHHhhcCCceEEecC-----c----ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHH
Confidence 4789999999999999999999963 3 579999999999999999999999999999999999999999999
Q ss_pred HHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCC----hhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCc
Q 014742 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK----IPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGV 196 (419)
Q Consensus 121 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (419)
|++++|+.+|..-|.....||.+..+.++++..|++... ...+.+......+.++.+++.++.+..
T Consensus 97 ALlrlGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~~~~---------- 166 (542)
T COG1021 97 ALLRLGVAPVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEAEHP---------- 166 (542)
T ss_pred HHHHcCcchhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccCCCCc----------
Confidence 999999999999899999999999999999999998642 233344344455788888888654321
Q ss_pred eeeeHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChH
Q 014742 197 SCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLA 276 (419)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~ 276 (419)
...+..+........+.++.+++++++...+.||||.||.+..||.....+++...+.. ++++++++++.+|..
T Consensus 167 -~~~~~~~~~~a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC-----~~~~~tvyL~~LP~A 240 (542)
T COG1021 167 -SVLEAALCHPAGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEIC-----GFDQQTVYLCALPAA 240 (542)
T ss_pred -chhhhhhhCccccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhh-----CcCccceEEEecccc
Confidence 11223333333445556677889999999999999999999999999999999977766 899999999999999
Q ss_pred HHHHHHH--HHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhh
Q 014742 277 HIYDQII--ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKL 353 (419)
Q Consensus 277 h~~g~~~--~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (419)
|.|.+++ .+..++.|+++|+.+. ++...+-+|+++++|+...+|.....+++.
T Consensus 241 HNfplssPG~LGv~~agG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa------------------------ 296 (542)
T COG1021 241 HNFPLSSPGALGVFLAGGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQA------------------------ 296 (542)
T ss_pred cCCCCCCcchhheeeeccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHh------------------------
Confidence 9999997 7889999999999987 999999999999999999999999988762
Q ss_pred hhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 354 GNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
..++..+++ |||++.+||+.+++...+++...+|+.+-+.+||.|
T Consensus 297 -------------~e~~~~~Ls--------SLrllQVGGarl~~~~Arrv~~~lgC~LQQVFGMAE 341 (542)
T COG1021 297 -------------AEWERADLS--------SLRLLQVGGARLSATLARRVPAVLGCQLQQVFGMAE 341 (542)
T ss_pred -------------hhcccCCch--------heeEEeecCcccCHHHHhhchhhhCchHHHHhhhhh
Confidence 234555565 999999999999999999999999999999999987
No 69
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=5e-36 Score=310.29 Aligned_cols=319 Identities=17% Similarity=0.155 Sum_probs=236.2
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHH
Q 014742 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (419)
Q Consensus 42 ~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA 121 (419)
..++.+.+.. +.++++|+++. + +++..+.+||.||.++++++|+.|++.|+++||+|+++++|+++++++++|
T Consensus 86 ~~n~~~~~~~---~~~~~~a~~~~---~-~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~~lA 158 (652)
T TIGR01217 86 RLNYAENLLR---AAGTEPALLYV---D-ETHEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVAMLA 158 (652)
T ss_pred eeeHHHHHhc---cCCCCeEEEEE---C-CCCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 4455555544 35789999886 3 344557899999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCC---------hhhHhhcCccCCCCccEEEEecCCChhhHHHHH
Q 014742 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK---------IPSILSCLPRCCLYLKTIVSFANVSSSQKKEAE 192 (419)
Q Consensus 122 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (419)
|+++|++++|+++.++.+++.++++.++++++|+++.. .+.+.++. ...+.++.+++++..........
T Consensus 159 ~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~- 236 (652)
T TIGR01217 159 TASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVR-KELPTLRAVVHIPYLGPRETEAP- 236 (652)
T ss_pred HHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHH-hcCCCccEEEEEeCCCCcccccc-
Confidence 99999999999999999999999999999999998753 22222222 22244555665543211000000
Q ss_pred HhCceeeeHHHHHhcC-CCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHH-HhhhhhhhhhhcCccCCCCcEEE
Q 014742 193 ELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVA-EVLSVDQMFVVTGKVCSEEDTYF 270 (419)
Q Consensus 193 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~-~~~~~~~~~~~~~~~~~~~d~~l 270 (419)
.......|+++.... ...........+++++|+|||||||.||||+++|++++. ........+ ++.++|+++
T Consensus 237 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-----~~~~~d~~~ 310 (652)
T TIGR01217 237 -KIDGALDLEDFTAAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHC-----DLGPGDRLF 310 (652)
T ss_pred -cccCcccHHHHHhcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhcc-----CCCCCcEEE
Confidence 001234567765442 112222344568999999999999999999999998654 333333333 788899999
Q ss_pred EecChHHHHHHHHHHHHHhcCceEEEeCC-----CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHH
Q 014742 271 SFLPLAHIYDQIIETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLF 345 (419)
Q Consensus 271 ~~~pl~h~~g~~~~l~~l~~G~~ivl~~~-----~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~ 345 (419)
+..|+.|..+ ..++.+|+.|+++++.++ ++..+++.++++++|++.++|.++..+.+.
T Consensus 311 ~~~~~~~~~~-~~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~---------------- 373 (652)
T TIGR01217 311 YYTTTGWMMW-NWLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKA---------------- 373 (652)
T ss_pred EeCCcchhhh-HHHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhc----------------
Confidence 9999998753 345688999999999853 678999999999999998777777665320
Q ss_pred HHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhC--CceeeeccCCC
Q 014742 346 EFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG--APLTQGYGMVE 419 (419)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~--~~v~~~YG~tE 419 (419)
.....+..+++ +||.+++||+++++++.+++.+.++ +.+.+.||+||
T Consensus 374 -------------------~~~~~~~~~l~--------sLr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE 422 (652)
T TIGR01217 374 -------------------GVHPARTHDLS--------ALQCVASTGSPLPPDGFRWVYDEIKADVWLASISGGTD 422 (652)
T ss_pred -------------------CCCccccCChh--------heeEEEeecCCCCHHHHHHHHHHhCCCceEEeccCHHH
Confidence 00001222343 8999999999999999999999885 45778999997
No 70
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.1e-35 Score=303.34 Aligned_cols=313 Identities=22% Similarity=0.355 Sum_probs=248.7
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHH
Q 014742 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (419)
Q Consensus 40 ~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~ 119 (419)
....++.++|.+.++.+|+++|+++. +++ +.+||.||.++++++|+.|.+.|+++|++|+++++|++++++++
T Consensus 13 ~~~~~l~~~l~~~~~~~~~~~ai~~~---~~~----~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~ 85 (559)
T PRK08315 13 LLEQTIGQLLDRTAARYPDREALVYR---DQG----LRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQ 85 (559)
T ss_pred hhhccHHHHHHHHHHHCCCCeEEEEc---CCC----eEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHH
Confidence 45668999999999999999999875 332 57999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChh-----hHhhcCcc------------CCCCccEEEEecC
Q 014742 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP-----SILSCLPR------------CCLYLKTIVSFAN 182 (419)
Q Consensus 120 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-----~~~~~~~~------------~~~~~~~~~~~~~ 182 (419)
+||+++|++++|+++..+.+++..+++.++++++|++..... .+.+.... ..+....++..+.
T Consensus 86 la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (559)
T PRK08315 86 FATAKIGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGD 165 (559)
T ss_pred HHHHHhCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeecc
Confidence 999999999999999999999999999999999999876432 11111100 0112333444332
Q ss_pred CChhhHHHHHHhCceeeeHHHHHhcCC----C--CCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhh
Q 014742 183 VSSSQKKEAEELGVSCFSWEEFLQLGT----L--DCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMF 256 (419)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~ 256 (419)
... .....++++..... . ........++++++++|||||||.||+|.++|.++..++......+
T Consensus 166 ~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~ 235 (559)
T PRK08315 166 EKH----------PGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAM 235 (559)
T ss_pred cCC----------cccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhc
Confidence 210 11234444433220 0 1112234568899999999999999999999999998888876666
Q ss_pred hhcCccCCCCcEEEEecChHHHHHHHH-HHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHH
Q 014742 257 VVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNK 333 (419)
Q Consensus 257 ~~~~~~~~~~d~~l~~~pl~h~~g~~~-~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~ 333 (419)
++.++|+++..+|++|.+++.. ++.++..|+++++... ++..+++.++++++|.+.++|.++..++..
T Consensus 236 -----~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~---- 306 (559)
T PRK08315 236 -----KLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDH---- 306 (559)
T ss_pred -----CCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhC----
Confidence 7888999999999999999876 7788999999996543 999999999999999999999999887641
Q ss_pred hhccCchHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCc-ee
Q 014742 334 ISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAP-LT 412 (419)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~-v~ 412 (419)
+..+...+ +++|.+++||+++++++.+.+.+.++.. ++
T Consensus 307 ---------------------------------~~~~~~~~--------~~lr~~~~~G~~~~~~~~~~~~~~~~~~~l~ 345 (559)
T PRK08315 307 ---------------------------------PDFARFDL--------SSLRTGIMAGSPCPIEVMKRVIDKMHMSEVT 345 (559)
T ss_pred ---------------------------------cccCCCCc--------hhhheeEecCCCCCHHHHHHHHHHcCCccee
Confidence 11111112 3899999999999999999999988765 99
Q ss_pred eeccCCC
Q 014742 413 QGYGMVE 419 (419)
Q Consensus 413 ~~YG~tE 419 (419)
+.||+||
T Consensus 346 ~~YG~tE 352 (559)
T PRK08315 346 IAYGMTE 352 (559)
T ss_pred EEEcccc
Confidence 9999998
No 71
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.7e-36 Score=302.24 Aligned_cols=306 Identities=20% Similarity=0.231 Sum_probs=245.1
Q ss_pred CCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHH
Q 014742 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (419)
Q Consensus 41 ~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~l 120 (419)
+..|+.++|.++++++|+++|+++. + +.+||.||.++++++++.|.+.|+++|++|+++++|+++++++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~a~~~~---~------~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~l 80 (524)
T PRK06188 10 SGATYGHLLVSALKRYPDRPALVLG---D------TRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIG 80 (524)
T ss_pred CCccHHHHHHHHHHHCCCCeEEEEC---C------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 4568999999999999999999864 2 479999999999999999999999999999999999999999999
Q ss_pred HHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCC-ChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceee
Q 014742 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN-KIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (419)
Q Consensus 121 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (419)
||+++|++++|+++..+.+++..++..++++.++++.. ......... .....+..++.++...... .
T Consensus 81 a~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----------~ 148 (524)
T PRK06188 81 AAQLAGLRRTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALL-ARVPSLKHVLTLGPVPDGV-----------D 148 (524)
T ss_pred HHHHhCCEEEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHh-hhcCCceEEEEeCCccchh-----------h
Confidence 99999999999999999999999999999999999876 333222211 1123334445444321100 0
Q ss_pred eHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHH
Q 014742 200 SWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (419)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~ 279 (419)
.++.... ...........++++++++|||||||.||+|.++|.++...+......+ ++..+|++++.+|++|.+
T Consensus 149 ~~~~~~~-~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~l~~~pl~~~~ 222 (524)
T PRK06188 149 LLAAAAK-FGPAPLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEW-----EWPADPRFLMCTPLSHAG 222 (524)
T ss_pred HHHhhhc-cCcccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhc-----CCCcCcEEEEecCchhhh
Confidence 0111110 1111111222456699999999999999999999999999888766655 788899999999999998
Q ss_pred HHHHHHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhcc
Q 014742 280 DQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKK 358 (419)
Q Consensus 280 g~~~~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (419)
++. ++.+++.|+++++.+. ++..+++.++++++|+++++|.++..+++.
T Consensus 223 g~~-~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~----------------------------- 272 (524)
T PRK06188 223 GAF-FLPTLLRGGTVIVLAKFDPAEVLRAIEEQRITATFLVPTMIYALLDH----------------------------- 272 (524)
T ss_pred hHH-HHHHHHcCCEEEEcCCCCHHHHHHHHHHhCCEEEEehHHHHHHHHhC-----------------------------
Confidence 864 5677999999999987 999999999999999999999999998652
Q ss_pred CCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 359 GMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 359 ~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
+.....++ +++|.+++||++++++....+.+.++..+++.||+||
T Consensus 273 --------~~~~~~~l--------~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE 317 (524)
T PRK06188 273 --------PDLRTRDL--------SSLETVYYGASPMSPVRLAEAIERFGPIFAQYYGQTE 317 (524)
T ss_pred --------cCccCCCC--------cceeEEEEcCCCCCHHHHHHHHHHhCchhhheeCccc
Confidence 10111122 3899999999999999999998888999999999998
No 72
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-35 Score=297.68 Aligned_cols=298 Identities=18% Similarity=0.224 Sum_probs=240.4
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHH
Q 014742 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (419)
Q Consensus 42 ~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA 121 (419)
+.++.+.|..+++.+|+++|+++. + +.+||.||.+++.++|.+|.+.|+++|++|+++++|++++++.++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~a~~~~----~-----~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la 71 (497)
T PRK06145 1 MFNLSASIAFHARRTPDRAALVYR----D-----QEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFA 71 (497)
T ss_pred CccHHHHHHHHHHHCCCceEEEEC----C-----cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 467889999999999999999864 3 4799999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeH
Q 014742 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (419)
Q Consensus 122 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (419)
|+++|++++|+++..+.+++.++++.+++++++++.+..... .. ....+.++..... .+
T Consensus 72 ~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~-~~-------~~~~~~~~~~~~~-------------~~ 130 (497)
T PRK06145 72 ASYLGAVFLPINYRLAADEVAYILGDAGAKLLLVDEEFDAIV-AL-------ETPKIVIDAAAQA-------------DS 130 (497)
T ss_pred HHhcCcEEEecccccCHHHHHHHHHhcCCcEEEEccchhhhh-hc-------ccceEEecCcccc-------------hh
Confidence 999999999999999999999999999999999987654322 10 1122222221100 01
Q ss_pred HHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHH
Q 014742 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (419)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~ 281 (419)
..+..............++++++++|||||||.||+|.++|.++...+......+ ++..+++++...|++|.+++
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~~~ 205 (497)
T PRK06145 131 RRLAQGGLEIPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIAL-----GLTASERLLVVGPLYHVGAF 205 (497)
T ss_pred HHHhccCCCCCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhh-----CCCCCcEEEEecCchhHhHH
Confidence 1111111111112234678999999999999999999999999987665544444 77888999999999999998
Q ss_pred HH-HHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccC
Q 014742 282 II-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKG 359 (419)
Q Consensus 282 ~~-~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (419)
.. .+.++..|+++++.+. ++..+++.++++++|.+.++|.+++.++..
T Consensus 206 ~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~------------------------------ 255 (497)
T PRK06145 206 DLPGIAVLWVGGTLRIHREFDPEAVLAAIERHRLTCAWMAPVMLSRVLTV------------------------------ 255 (497)
T ss_pred HHHHHHHHhccCEEEECCcCCHHHHHHHHHHhCCeEEEehHHHHHHHHcC------------------------------
Confidence 76 5778999999999877 999999999999999999999999998651
Q ss_pred CCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhh-CCceeeeccCCC
Q 014742 360 MPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGMVE 419 (419)
Q Consensus 360 ~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~tE 419 (419)
......++ +++|.+++||+++++++.+++.+.+ +.++++.||+||
T Consensus 256 -------~~~~~~~~--------~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~tE 301 (497)
T PRK06145 256 -------PDRDRFDL--------DSLAWCIGGGEKTPESRIRDFTRVFTRARYIDAYGLTE 301 (497)
T ss_pred -------CCcccccc--------ccceEEEecCCCCCHHHHHHHHHHcCCCceEEeecCcc
Confidence 00111122 2899999999999999999999988 678999999998
No 73
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=1.2e-35 Score=301.65 Aligned_cols=306 Identities=16% Similarity=0.182 Sum_probs=245.2
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHH
Q 014742 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (419)
Q Consensus 42 ~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA 121 (419)
+.++.++|..+++ ||++|+++. + +.+||.||.++++++|+.|.+.|+++|++|+++++|+++++++++|
T Consensus 24 ~~~~~~~~~~~a~--p~~~a~~~~----~-----~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la 92 (536)
T PRK10946 24 DLPLTDILTRHAA--SDAIAVICG----E-----RQFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFA 92 (536)
T ss_pred CccHHHHHHHhhC--CCCeEEEeC----C-----CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHH
Confidence 5689999999887 999999964 2 4799999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCCh----hhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCce
Q 014742 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI----PSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVS 197 (419)
Q Consensus 122 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (419)
|+++|++++++.+.....++..+++.+++++++++.... ....+...........++..++..
T Consensus 93 ~~~~G~v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~------------- 159 (536)
T PRK10946 93 LLKLGVAPVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVLLLNDDG------------- 159 (536)
T ss_pred HHHcCeEEecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEEEecCCC-------------
Confidence 999999888888777888999999999999999986531 111222222223344444433211
Q ss_pred eeeHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHH
Q 014742 198 CFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAH 277 (419)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h 277 (419)
...+.++........+.....++++++++|||||||.||||.+||+++...+......+ +++.+|++++.+|++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~-----~~~~~~~~l~~~p~~h 234 (536)
T PRK10946 160 EHSLDDAINHPAEDFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEIC-----GFTPQTRYLCALPAAH 234 (536)
T ss_pred CccHHHHhhCcccccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhc-----CCCCCceEEEecCccc
Confidence 22344444333222223344678999999999999999999999999999988866655 7888999999999999
Q ss_pred HHHHHH--HHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhh
Q 014742 278 IYDQII--ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLG 354 (419)
Q Consensus 278 ~~g~~~--~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (419)
.+++.. ++.++..|+++++.+. ++..+++.++++++|++.++|.++..+++.++..
T Consensus 235 ~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~--------------------- 293 (536)
T PRK10946 235 NYPMSSPGALGVFLAGGTVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEG--------------------- 293 (536)
T ss_pred cccchhhhHHHHhhcCcEEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhccc---------------------
Confidence 998864 6778999999999876 9999999999999999999999999987632110
Q ss_pred hhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 355 NMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
.....+ +++|.+++||+++++++.+++.+.+|+++++.||+||
T Consensus 294 --------------~~~~~~--------~~l~~v~~gg~~l~~~~~~~~~~~~g~~~~~~YG~tE 336 (536)
T PRK10946 294 --------------GSRAQL--------ASLKLLQVGGARLSETLARRIPAELGCQLQQVFGMAE 336 (536)
T ss_pred --------------Cccccc--------cceeEEEECCCCCCHHHHHHHHHhcCCeEEEeecccc
Confidence 000011 3899999999999999999999989999999999998
No 74
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=1.9e-35 Score=298.30 Aligned_cols=306 Identities=21% Similarity=0.260 Sum_probs=245.3
Q ss_pred CCHHHHHHHH-HHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHH
Q 014742 43 ESPWQFFCDS-AKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (419)
Q Consensus 43 ~tl~~~l~~~-a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA 121 (419)
+...++|+++ ++.+||++|+++. + ..+||.|+.++++++|++|.+.|+++|++|+++++|+++++++++|
T Consensus 4 ~~~~~~~~~~~~~~~p~~~a~~~~---~------~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~a 74 (508)
T TIGR02262 4 NAAEDLLDRNVVEGRGGKTAFIDD---I------SSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLG 74 (508)
T ss_pred hHHHHHHHHHHhcccCCceEEEeC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 4456677776 6779999999864 2 4799999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeH
Q 014742 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (419)
Q Consensus 122 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (419)
|+++|++++|+++.++.+++.++++.++++++|++......+.+... ..+....++..+.... ....+
T Consensus 75 ~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----------~~~~~ 142 (508)
T TIGR02262 75 AIRAGIVPVALNTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALG-KSPHLEHRVVVGRPEA-----------GEVQL 142 (508)
T ss_pred HHHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHh-cCCCccEEEEeCCCCc-----------ccccH
Confidence 99999999999999999999999999999999999876665544322 2234445555443211 12234
Q ss_pred HHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhh-hhhhhhhcCccCCCCcEEEEecChHHHHH
Q 014742 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLS-VDQMFVVTGKVCSEEDTYFSFLPLAHIYD 280 (419)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~-~~~~~~~~~~~~~~~d~~l~~~pl~h~~g 280 (419)
.++..............++++++++|||||||.||+|.++|+++...+.. ....+ +++.+|++++.+|++|.++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~~ 217 (508)
T TIGR02262 143 AELLATESEQFKPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTL-----GIREDDVVFSAAKLFFAYG 217 (508)
T ss_pred HHHhhcCCCccCCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhc-----CCCCCCEEEEcCchHHHHH
Confidence 44443332222233445789999999999999999999999999877655 33333 6788899999999999999
Q ss_pred HHH-HHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhc
Q 014742 281 QII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (419)
Q Consensus 281 ~~~-~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (419)
+.. ++.++..|+++++.+. ++..+++.|+++++|.+.++|.++..+++.
T Consensus 218 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~---------------------------- 269 (508)
T TIGR02262 218 LGNALTFPMSVGATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLAD---------------------------- 269 (508)
T ss_pred HHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcC----------------------------
Confidence 975 6678999999999865 899999999999999999999988876531
Q ss_pred cCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
.......+ +++|.+++||+++++++.+.|++.+|+++++.||+||
T Consensus 270 ---------~~~~~~~~--------~~l~~~~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 314 (508)
T TIGR02262 270 ---------PNLPAEDQ--------VRLRLCTSAGEALPAEVGQRWQARFGVDIVDGIGSTE 314 (508)
T ss_pred ---------cccccccc--------ccceeEEEcCCCCCHHHHHHHHHHhCCchhhCccccc
Confidence 00000001 3899999999999999999999999999999999998
No 75
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.4e-35 Score=306.57 Aligned_cols=313 Identities=18% Similarity=0.170 Sum_probs=237.7
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHH
Q 014742 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (419)
Q Consensus 40 ~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~ 119 (419)
....++.++|+.+++.+|+++|+++....+...+..+.+||.||.++++++|++|++. +++||+|+++++|++++++++
T Consensus 18 ~~~~~l~~~l~~~a~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~~~~ 96 (631)
T PRK07769 18 PPNTNLVRHVERWAKVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYLIAF 96 (631)
T ss_pred cccCCHHHHHHHHHHhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHHHHH
Confidence 3457899999999999999999986410001123346899999999999999999987 899999999999999999999
Q ss_pred HHHHHcCCeEEee-ccCCC--hhHHHHHHhhcCceEEEEeCCChhhHhhcCccCC-CCccEEEEecCCChhhHHHHHHhC
Q 014742 120 EACNSQAITYVPL-YDTLG--ANAVEFIINHAEVSIAFVQENKIPSILSCLPRCC-LYLKTIVSFANVSSSQKKEAEELG 195 (419)
Q Consensus 120 lA~~~~G~~~vpl-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 195 (419)
+||+++|++++|+ ++..+ .+++.++++.++++++|++......+........ .....++.++....
T Consensus 97 lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 166 (631)
T PRK07769 97 FGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERPRVIAVDAVPD---------- 166 (631)
T ss_pred HHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccceEEEcccccc----------
Confidence 9999999999999 55554 6789999999999999998876544432211110 11223333322100
Q ss_pred ceeeeHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecCh
Q 014742 196 VSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPL 275 (419)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl 275 (419)
............++++++|+|||||||.||||++||+++...+......+ ++..+|++++.+|+
T Consensus 167 -----------~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~d~~l~~~Pl 230 (631)
T PRK07769 167 -----------EVGATWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDAL-----EGQEGDRGVSWLPF 230 (631)
T ss_pred -----------ccccccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHc-----CCCCcceEEEeCCC
Confidence 00001111234578999999999999999999999999998887766655 77789999999999
Q ss_pred HHHHHHHHHHHHHhcCceEEEeC---C--CHHHHHHHhhhhcC---eEEEecchHHHHHHHHHHHHhhccCchHHHHHHH
Q 014742 276 AHIYDQIIETHCIHKGCSIGFWR---G--DVRYLMEDIQELKP---TMFSGVPRVYDRIYTGISNKISSGGALSKKLFEF 347 (419)
Q Consensus 276 ~h~~g~~~~l~~l~~G~~ivl~~---~--~~~~~~~~i~~~~~---t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~ 347 (419)
+|.+|+..++.+++.|+++++.+ . ++..+++.+.++++ +.+.++|.++..+..... ..
T Consensus 231 ~h~~gl~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~--~~------------ 296 (631)
T PRK07769 231 FHDMGLITVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARG--LP------------ 296 (631)
T ss_pred cCchhhHHHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhc--cc------------
Confidence 99999988777788899998874 2 88899999999886 789999998877643100 00
Q ss_pred HHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhh---CC---ceeeeccCCC
Q 014742 348 AYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS---GA---PLTQGYGMVE 419 (419)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~---~~---~v~~~YG~tE 419 (419)
.......+++ ++|.+++||+++++++.++|.+.| |+ .+++.||+||
T Consensus 297 ------------------~~~~~~~~l~--------~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE 348 (631)
T PRK07769 297 ------------------KDGEPPLDLS--------NVKGLLNGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAE 348 (631)
T ss_pred ------------------hhcccCcchh--------heeeEEeccCCCCHHHHHHHHHHHhhcCCChhhcccccchhh
Confidence 0000012343 899999999999999999999987 33 5999999998
No 76
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=1.5e-35 Score=302.81 Aligned_cols=318 Identities=21% Similarity=0.293 Sum_probs=240.4
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHH
Q 014742 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (419)
Q Consensus 43 ~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~ 122 (419)
.++.+.+...+..+|+++|+.+. + ..+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++||
T Consensus 20 ~~~~~~~~~~~~~~p~~~a~~~~----~-----~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~la~ 90 (567)
T PLN02479 20 LTPLWFLERAAVVHPTRKSVVHG----S-----VRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAHFGV 90 (567)
T ss_pred cCHHHHHHHHHhhCCCceEEEEC----C-----ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHH
Confidence 36889999999999999999863 2 47999999999999999999999999999999999999999999999
Q ss_pred HHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccC------CCCccEEEEecCCChhhHHHHHHhCc
Q 014742 123 NSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRC------CLYLKTIVSFANVSSSQKKEAEELGV 196 (419)
Q Consensus 123 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (419)
+++|++++|+++.++.+++.++++.++++++|+++...+...+..... ....+.++++.+..............
T Consensus 91 ~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (567)
T PLN02479 91 PMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGK 170 (567)
T ss_pred HhCCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCcccccccccc
Confidence 999999999999999999999999999999999987655443322110 01123344443211000000000011
Q ss_pred eeeeHHHHHhcCCCCCC-CCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecCh
Q 014742 197 SCFSWEEFLQLGTLDCE-LPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPL 275 (419)
Q Consensus 197 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl 275 (419)
+...|++++........ ......++.++++|||||||.||||++||+++...+......+ ++..++++++.+|+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~ 245 (567)
T PLN02479 171 GAIEYEKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIW-----GMNEGAVYLWTLPM 245 (567)
T ss_pred CcccHHHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhc-----CCCCCCEEEEecch
Confidence 23456666554321111 1122334677899999999999999999999877665544433 67788999999999
Q ss_pred HHHHHHHHHH-HHHhcCceEEEeCCCHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhh
Q 014742 276 AHIYDQIIET-HCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLG 354 (419)
Q Consensus 276 ~h~~g~~~~l-~~l~~G~~ivl~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (419)
+|.+++...+ ..+..|.++++...++..+++.++++++|++.++|.++..|.+....
T Consensus 246 ~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~---------------------- 303 (567)
T PLN02479 246 FHCNGWCFTWTLAALCGTNICLRQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKS---------------------- 303 (567)
T ss_pred hhhhhHHHHHHHHhhcCceEeccCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhh----------------------
Confidence 9999987644 45666766666555999999999999999999999999988652110
Q ss_pred hhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 355 NMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
.....+ +++|.++++|+++++.+.++|.+. +.++++.||+||
T Consensus 304 --------------~~~~~~--------~~l~~~~~~G~~~~~~~~~~~~~~-~~~~~~~yG~tE 345 (567)
T PLN02479 304 --------------ETILPL--------PRVVHVMTAGAAPPPSVLFAMSEK-GFRVTHTYGLSE 345 (567)
T ss_pred --------------cccccc--------cceeEEEEcCCCCCHHHHHHHHhc-CCceeccccccc
Confidence 000011 388999999999999999999885 899999999998
No 77
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=1e-35 Score=327.58 Aligned_cols=316 Identities=18% Similarity=0.241 Sum_probs=250.3
Q ss_pred CCCCCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHH
Q 014742 37 ESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWI 116 (419)
Q Consensus 37 ~~~~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~ 116 (419)
..+....++.+.+.+.++++||++|+.+. ++ +.+||.|+.++++++|+.|++ ++++||+|+++++|+++++
T Consensus 609 ~~~~~~~~l~~~~~~~a~~~p~~~a~~~~---~~-----~~~Ty~el~~~~~~~a~~L~~-~~~~g~~V~i~~~n~~~~~ 679 (1146)
T PRK08633 609 SRKEALPPLAEAWIDTAKRNWSRLAVADS---TG-----GELSYGKALTGALALARLLKR-ELKDEENVGILLPPSVAGA 679 (1146)
T ss_pred hhcCCCCCHHHHHHHHHHhcCCCcEEEcC---CC-----CcCcHHHHHHHHHHHHHHHHH-hCCCCCeEEEECCCchHHH
Confidence 34456788999999999999999999853 23 479999999999999999987 4799999999999999999
Q ss_pred HHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCc-cCCCCccEEEEecCCChhhHHHHHHhC
Q 014742 117 IAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLP-RCCLYLKTIVSFANVSSSQKKEAEELG 195 (419)
Q Consensus 117 ~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (419)
++++||+++|++++|+++..+.+++.++++.++++++++++...+.+.+... ........++..++......
T Consensus 680 ~~~la~~~~G~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 752 (1146)
T PRK08633 680 LANLALLLAGKVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLKAKIS------- 752 (1146)
T ss_pred HHHHHHHHcCCEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhccccc-------
Confidence 9999999999999999999999999999999999999998765554432110 01122234444433211000
Q ss_pred ceeeeHHHHHhcCC-C-----CCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEE
Q 014742 196 VSCFSWEEFLQLGT-L-----DCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTY 269 (419)
Q Consensus 196 ~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~ 269 (419)
....+.+...... + ........++++++++|||||||.||||.+||+++..++......+ +..++|++
T Consensus 753 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~d~~ 826 (1146)
T PRK08633 753 -KVDKLTALLAARLLPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVF-----NLRNDDVI 826 (1146)
T ss_pred -hhHHHHHHHHhccCCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhc-----CCCCCCEE
Confidence 0011221111110 0 0001344678999999999999999999999999999888866665 77889999
Q ss_pred EEecChHHHHHHHH-HHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHH
Q 014742 270 FSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFE 346 (419)
Q Consensus 270 l~~~pl~h~~g~~~-~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~ 346 (419)
++.+|++|.+++.. ++.++..|+++++.+. +++.+++.++++++|++.++|.+++.+.+.
T Consensus 827 l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~----------------- 889 (1146)
T PRK08633 827 LSSLPFFHSFGLTVTLWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRN----------------- 889 (1146)
T ss_pred EEcCcHHHHHhHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhc-----------------
Confidence 99999999999987 7888999999998764 899999999999999999999999987651
Q ss_pred HHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 347 FAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
+..+..++ +++|.+++||+++++++.+++++.+|.++++.||+||
T Consensus 890 --------------------~~~~~~~~--------~~lr~~~~gg~~~~~~~~~~~~~~~g~~~~~~YG~tE 934 (1146)
T PRK08633 890 --------------------KKLHPLMF--------ASLRLVVAGAEKLKPEVADAFEEKFGIRILEGYGATE 934 (1146)
T ss_pred --------------------cccCcccC--------CCeeeEEEcCCcCCHHHHHHHHHHhCCCeeccccccc
Confidence 11122223 3899999999999999999999999999999999998
No 78
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.1e-35 Score=296.09 Aligned_cols=316 Identities=22% Similarity=0.271 Sum_probs=246.9
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHH
Q 014742 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (419)
Q Consensus 43 ~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~ 122 (419)
.|+.++|.+.++++||++|+.+. + +.+||.||.++++++|+.|.+.|+++||+|+++++|+++++++++||
T Consensus 3 ~~l~~~~~~~a~~~p~~~a~~~~----~-----~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~ 73 (533)
T PRK07798 3 WNIADLFEAVADAVPDRVALVCG----D-----RRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGA 73 (533)
T ss_pred ccHHHHHHHHHHhCCCceEEEEC----C-----ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 37899999999999999999874 3 57999999999999999999999999999999999999999999999
Q ss_pred HHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeHH
Q 014742 123 NSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWE 202 (419)
Q Consensus 123 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (419)
+++|++++|+++.++.+++.++++.+++++++++......+.+... .....+.++.+++..... ......+++
T Consensus 74 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 146 (533)
T PRK07798 74 FKARAVPVNVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLP-RLPKLRTLVVVEDGSGND------LLPGAVDYE 146 (533)
T ss_pred HhcCeEEEecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhc-cCCCccEEEEecCCcccc------cCCccccHH
Confidence 9999999999999999999999999999999999877666655432 224455566665432110 001234566
Q ss_pred HHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhh----cCccC------CCCcEEEEe
Q 014742 203 EFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVV----TGKVC------SEEDTYFSF 272 (419)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~----~~~~~------~~~d~~l~~ 272 (419)
++............ ..++.++++|||||||.||+|+++|+++...+......+.. ....+ ..+++++..
T Consensus 147 ~~~~~~~~~~~~~~-~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (533)
T PRK07798 147 DALAAGSPERDFGE-RSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPA 225 (533)
T ss_pred HHHhccCCcCCCCC-CCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEe
Confidence 66554321111112 23345789999999999999999999998655443221100 00111 466899999
Q ss_pred cChHHHHHHHHHHHHHhcCceEEEeC--C-CHHHHHHHhhhhcCeEEEecchHHHH-HHHHHHHHhhccCchHHHHHHHH
Q 014742 273 LPLAHIYDQIIETHCIHKGCSIGFWR--G-DVRYLMEDIQELKPTMFSGVPRVYDR-IYTGISNKISSGGALSKKLFEFA 348 (419)
Q Consensus 273 ~pl~h~~g~~~~l~~l~~G~~ivl~~--~-~~~~~~~~i~~~~~t~l~~~P~~~~~-l~~~~~~~~~~~~~~~~~~~~~~ 348 (419)
+|++|.+++..++.++..|+++++.+ . ++..+++.++++++|.+.++|..+.. +.+.+. .
T Consensus 226 ~pl~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~-~--------------- 289 (533)
T PRK07798 226 PPLMHGAGQWAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALE-A--------------- 289 (533)
T ss_pred cchhhhhhHHHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhc-c---------------
Confidence 99999999988889999999999998 4 99999999999999999999987654 322111 0
Q ss_pred HHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhh-CCceeeeccCCC
Q 014742 349 YNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGMVE 419 (419)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~tE 419 (419)
....++ .++|.+++||+++++++.+++++.+ +.++++.||+||
T Consensus 290 --------------------~~~~~~--------~~l~~i~~gG~~~~~~~~~~~~~~~~~~~~~~~YG~tE 333 (533)
T PRK07798 290 --------------------RGPYDL--------SSLFAIASGGALFSPSVKEALLELLPNVVLTDSIGSSE 333 (533)
T ss_pred --------------------cccCCC--------CceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccc
Confidence 000011 3899999999999999999999988 889999999998
No 79
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=1.4e-35 Score=330.03 Aligned_cols=294 Identities=19% Similarity=0.270 Sum_probs=243.4
Q ss_pred CCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHH
Q 014742 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (419)
Q Consensus 41 ~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~l 120 (419)
+..++.++|...++.+||++|+.+. + ..+||.||.++++++|+.|.+.|+++|++|+++++++++++++++
T Consensus 456 ~~~~l~~~~~~~~~~~p~~~Al~~~---~------~~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i~~~l 526 (1296)
T PRK10252 456 PETTLSALVAQQAAKTPDAPALADA---R------YQFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALH 526 (1296)
T ss_pred CcCCHHHHHHHHHHhCCCCeEEEcC---C------CcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHH
Confidence 3468999999999999999999864 3 479999999999999999999999999999999999999999999
Q ss_pred HHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeee
Q 014742 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (419)
Q Consensus 121 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (419)
||+++|++++|++++.+.+++.++++.+++++++++......+... ..+ .++..+.
T Consensus 527 a~~~~G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~-----~~~-~~~~~~~------------------ 582 (1296)
T PRK10252 527 AIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADV-----PDL-TSLCYNA------------------ 582 (1296)
T ss_pred HHHHhCCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccC-----CCc-eeeeccc------------------
Confidence 9999999999999999999999999999999999998765433211 000 1111110
Q ss_pred HHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHH
Q 014742 201 WEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYD 280 (419)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g 280 (419)
..... ...+.....++++++++|||||||.||||+++|+++.+.+......+ +++++|++++..|++|..+
T Consensus 583 ---~~~~~-~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-----~~~~~d~~l~~~~~~fd~~ 653 (1296)
T PRK10252 583 ---PLAPQ-GAAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHY-----PLTADDVVLQKTPCSFDVS 653 (1296)
T ss_pred ---ccccc-cCCCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhc-----CCCCCCEEEEeCCcchhhh
Confidence 00000 01111223578999999999999999999999999999998877766 8889999999999999998
Q ss_pred HHHHHHHHhcCceEEEeCC----CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhh
Q 014742 281 QIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNM 356 (419)
Q Consensus 281 ~~~~l~~l~~G~~ivl~~~----~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (419)
+..++.+|..|+++++.+. ++..+++.|+++++|++.++|+++..+++.....
T Consensus 654 ~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~----------------------- 710 (1296)
T PRK10252 654 VWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPE----------------------- 710 (1296)
T ss_pred HHHHHHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccc-----------------------
Confidence 8878999999999999763 8999999999999999999999999886521100
Q ss_pred ccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 357 KKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 357 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
. . ...+ .++|.+++||+++++++.+.|++.+|.++++.||+||
T Consensus 711 ----------~-~-~~~~--------~~lr~i~~gGe~l~~~~~~~~~~~~~~~l~n~YG~TE 753 (1296)
T PRK10252 711 ----------G-A-RQSC--------ASLRQVFCSGEALPADLCREWQQLTGAPLHNLYGPTE 753 (1296)
T ss_pred ----------c-c-cccC--------CCccEEEEecCCCCHHHHHHHHhcCCCEEEeCCCcch
Confidence 0 0 0001 3899999999999999999999988999999999998
No 80
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=2.3e-35 Score=303.88 Aligned_cols=307 Identities=16% Similarity=0.183 Sum_probs=233.5
Q ss_pred CCCCHHHHHHHHHHhCCCCCceeeeeccCC---CCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHH
Q 014742 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDG---KVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWII 117 (419)
Q Consensus 41 ~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~---~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~ 117 (419)
+..|+.+++.++++.+|+++|+++. +. ..+.++.+||.||.++++++|++|.+. +++||+|+++++|++++++
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~a~~~~---~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~ 107 (612)
T PRK12476 32 PGTTLISLIERNIANVGDTVAYRYL---DHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVA 107 (612)
T ss_pred ccCcHHHHHHHHHHhCCCceEEEEE---ccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHH
Confidence 3578999999999999999999875 31 123446899999999999999999986 8999999999999999999
Q ss_pred HHHHHHHcCCeEEee-ccCCC--hhHHHHHHhhcCceEEEEeCCChhhHhhcCccCC-CCccEEEEecCCChhhHHHHHH
Q 014742 118 AMEACNSQAITYVPL-YDTLG--ANAVEFIINHAEVSIAFVQENKIPSILSCLPRCC-LYLKTIVSFANVSSSQKKEAEE 193 (419)
Q Consensus 118 ~~lA~~~~G~~~vpl-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 193 (419)
+++||+++|++++|+ ++.++ .+++.++++.++++++|++......+........ .....++.+++...
T Consensus 108 ~~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-------- 179 (612)
T PRK12476 108 GFFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRRPRVIAIDAIPD-------- 179 (612)
T ss_pred HHHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccCceEEEeccccc--------
Confidence 999999999999999 57776 7899999999999999998766554433221110 01223444332110
Q ss_pred hCceeeeHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCcc-CCCCcEEEEe
Q 014742 194 LGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKV-CSEEDTYFSF 272 (419)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~-~~~~d~~l~~ 272 (419)
............++++++|+|||||||.||||+++|+++..++......+ . +.+++++++.
T Consensus 180 -------------~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~~~~~l~~ 241 (612)
T PRK12476 180 -------------SAGESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSI-----DLLDRNTHGVSW 241 (612)
T ss_pred -------------cccccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHh-----ccCCCCceEEEe
Confidence 00011111234568999999999999999999999999988776655444 5 6678999999
Q ss_pred cChHHHHHHHHHHHHHhcCceEEEeCC-----CHHHHHHHhh--hhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHH
Q 014742 273 LPLAHIYDQIIETHCIHKGCSIGFWRG-----DVRYLMEDIQ--ELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLF 345 (419)
Q Consensus 273 ~pl~h~~g~~~~l~~l~~G~~ivl~~~-----~~~~~~~~i~--~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~ 345 (419)
+|++|.+|+..++.+++.|+++++... ++..+++.++ +++++.+.++|.++..++.....
T Consensus 242 ~Pl~h~~g~~~~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~------------- 308 (612)
T PRK12476 242 LPLYHDMGLSMIGFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGL------------- 308 (612)
T ss_pred CCcccccchHHHHHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcC-------------
Confidence 999999999876666556666665532 7889999994 58999999999998887542000
Q ss_pred HHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhh---CC---ceeeeccCCC
Q 014742 346 EFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS---GA---PLTQGYGMVE 419 (419)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~---~~---~v~~~YG~tE 419 (419)
....+.++++ ++| +++||+++++++.++|++.| |+ .+++.||+||
T Consensus 309 --------------------~~~~~~~~l~--------~lr-~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE 359 (612)
T PRK12476 309 --------------------PAEGDDIDLS--------NVV-LIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAE 359 (612)
T ss_pred --------------------hhhhcCcchh--------Hhe-EEecccCCCHHHHHHHHHHHHhcCCCccccccccchhh
Confidence 0001112333 889 99999999999999999987 54 4999999998
No 81
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.8e-35 Score=296.64 Aligned_cols=324 Identities=20% Similarity=0.274 Sum_probs=244.1
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHH
Q 014742 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (419)
Q Consensus 40 ~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~ 119 (419)
.+..++.++|...++.+|+++|+++. + ..+||.||.++++++|.+|.+.|+++||+|+++++|++++++++
T Consensus 20 ~~~~~i~~~l~~~a~~~p~~~a~~~~---~------~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~ 90 (557)
T PRK07059 20 SQYPSLADLLEESFRQYADRPAFICM---G------KAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAI 90 (557)
T ss_pred CCCCCHHHHHHHHHHHcCCCceEEEc---C------ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHH
Confidence 45678999999999999999999875 3 47999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhh-HH---------
Q 014742 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQ-KK--------- 189 (419)
Q Consensus 120 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--------- 189 (419)
+||+++|++++|+++..+.+++.++++.++++++|+++.....+...... ...+.++......... ..
T Consensus 91 la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (557)
T PRK07059 91 AAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAK--TAVKHVVVASMGDLLGFKGHIVNFVVRR 168 (557)
T ss_pred HHHHhcCeEEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhcc--cCCceeEEeccccccccccccccccccc
Confidence 99999999999999999999999999999999999987665444332211 1222332221110000 00
Q ss_pred ----HHHHhCceeeeHHHHHhcC-CCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCc-c-
Q 014742 190 ----EAEELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGK-V- 262 (419)
Q Consensus 190 ----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~-~- 262 (419)
...........+++..... ..........++++++|+|||||||.||+|+++|.+++.++......+..... .
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~ 248 (557)
T PRK07059 169 VKKMVPAWSLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKP 248 (557)
T ss_pred ccccccccCCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccC
Confidence 0000001123455544433 12222334567899999999999999999999999998766543332211000 1
Q ss_pred CCCCcEEEEecChHHHHHHHH-HHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCc
Q 014742 263 CSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGA 339 (419)
Q Consensus 263 ~~~~d~~l~~~pl~h~~g~~~-~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~ 339 (419)
....+.+++.+|++|.+++.. .+.++..|++.++.+. ++..+++.++++++|.+.++|.++..+.+.
T Consensus 249 ~~~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~---------- 318 (557)
T PRK07059 249 RPDQLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNN---------- 318 (557)
T ss_pred CCCCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcC----------
Confidence 112457788999999999865 6678888998877754 899999999999999999999999988651
Q ss_pred hHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 340 LSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
+.....+++ ++|.++.||+++++.+.++|.+.+|+++++.||+||
T Consensus 319 ---------------------------~~~~~~~~~--------~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE 363 (557)
T PRK07059 319 ---------------------------PDFDKLDFS--------KLIVANGGGMAVQRPVAERWLEMTGCPITEGYGLSE 363 (557)
T ss_pred ---------------------------cCcCcCCch--------hheEEEeccccCCHHHHHHHHHHhCCCeeecccccc
Confidence 111112233 889999999999999999999989999999999998
No 82
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.1e-35 Score=298.64 Aligned_cols=294 Identities=16% Similarity=0.168 Sum_probs=233.8
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCC-CCCCeEEEEcCCchhHHHHHHH
Q 014742 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGV-NPGDRCGIYGSNCPEWIIAMEA 121 (419)
Q Consensus 43 ~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~-~~gd~V~l~~~n~~~~~~~~lA 121 (419)
.|+.++|..++ .|+++|+++. + ..+||.||.++++++|..|.+.|+ ++|++|+++++|+++++++++|
T Consensus 3 ~~~~~~l~~~~--~p~~~Al~~~----~-----~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA 71 (540)
T PRK13388 3 DTIAQLLRDRA--GDDTIAVRYG----D-----RTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAA 71 (540)
T ss_pred hhHHHHHHhhc--cCCceEEEEC----C-----ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHH
Confidence 56888888764 7999999864 3 479999999999999999999999 7999999999999999999999
Q ss_pred HHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeH
Q 014742 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (419)
Q Consensus 122 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (419)
|+++|++++|+++.++.+++.++++.++++++|++++....+.+.. .+.. .++.+++. .+
T Consensus 72 ~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~---~~~~-~~i~~~~~----------------~~ 131 (540)
T PRK13388 72 AALGGYVLVGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLD---LPGV-RVLDVDTP----------------AY 131 (540)
T ss_pred HHhCCCEEEEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhc---ccCc-eEEEccch----------------hh
Confidence 9999999999999999999999999999999999887665443321 1122 23333221 12
Q ss_pred HHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHH
Q 014742 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (419)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~ 281 (419)
.++........+.....++++++++|||||||.||||.++|.++...+......+ ++..+|++++.+|++|.+++
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~~~ 206 (540)
T PRK13388 132 AELVAAAGALTPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERF-----GLTRDDVCYVSMPLFHSNAV 206 (540)
T ss_pred hhhhccccCcCCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHh-----CCCCCCEEEEeeCchhhcch
Confidence 2332211111122234678999999999999999999999999998887766666 78889999999999999998
Q ss_pred HH-HHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccC
Q 014742 282 II-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKG 359 (419)
Q Consensus 282 ~~-~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (419)
.. ++.++..|+++++.+. ++..+++.|+++++|++..+|..+..++..
T Consensus 207 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~------------------------------ 256 (540)
T PRK13388 207 MAGWAPAVASGAAVALPAKFSASGFLDDVRRYGATYFNYVGKPLAYILAT------------------------------ 256 (540)
T ss_pred HHHHHHHHHcCcEEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhC------------------------------
Confidence 76 4567999999998876 899999999999999999999999887541
Q ss_pred CCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 360 MPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 360 ~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
+... .... .+++.+ . |+++++...+.|.+.++.++++.||+||
T Consensus 257 ----~~~~---~~~~--------~~l~~~-~-G~~~~~~~~~~~~~~~~~~l~~~YG~tE 299 (540)
T PRK13388 257 ----PERP---DDAD--------NPLRVA-F-GNEASPRDIAEFSRRFGCQVEDGYGSSE 299 (540)
T ss_pred ----CCCc---cccc--------cceEEE-E-CCCCCHHHHHHHHHHhCCceeccccccc
Confidence 0000 0000 256643 3 6677888889999988999999999998
No 83
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=4.7e-35 Score=298.85 Aligned_cols=322 Identities=20% Similarity=0.293 Sum_probs=240.7
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHh-CCCCCCCeEEEEcCCchhHHHHHH
Q 014742 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRS-RGVNPGDRCGIYGSNCPEWIIAME 120 (419)
Q Consensus 42 ~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~-~g~~~gd~V~l~~~n~~~~~~~~l 120 (419)
..++.+.|...++.+|+++|+.+. + +.+||.||.++++++|++|.+ .|+++||+|+++++|+++++++++
T Consensus 23 ~~~~~~~l~~~~~~~p~~~a~~~~----~-----~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~l 93 (562)
T PRK12492 23 YKSVVEVFERSCKKFADRPAFSNL----G-----VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVF 93 (562)
T ss_pred cCcHHHHHHHHHHhCCCCeeEecC----C-----ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHH
Confidence 468999999999999999999853 3 479999999999999999998 499999999999999999999999
Q ss_pred HHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEec--CCChhhH----------
Q 014742 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFA--NVSSSQK---------- 188 (419)
Q Consensus 121 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---------- 188 (419)
||+++|++++|+++..+.+++.++++.++++++++++...........+. ....++... +......
T Consensus 94 a~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (562)
T PRK12492 94 GALRAGLIVVNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDT--GIEYLIEAKMGDLLPAAKGWLVNTVVDK 171 (562)
T ss_pred HHHHcCeEEeccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhcc--CceEEEeechhhccccccchhccccccc
Confidence 99999999999999999999999999999999999876544333222111 111111110 0000000
Q ss_pred --H-HHHHhCceeeeHHHHHhcC-CCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCc---
Q 014742 189 --K-EAEELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGK--- 261 (419)
Q Consensus 189 --~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~--- 261 (419)
. ..........+|+++.... ...........+++++|+|||||||.||||+++|+++...+......+.....
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~ 251 (562)
T PRK12492 172 VKKMVPAYHLPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQ 251 (562)
T ss_pred ccccccccCCcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhccccccc
Confidence 0 0000001124566555433 11122234567899999999999999999999999998877665543311000
Q ss_pred -cCCC-CcEEEEecChHHHHHHHH-HHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhc
Q 014742 262 -VCSE-EDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISS 336 (419)
Q Consensus 262 -~~~~-~d~~l~~~pl~h~~g~~~-~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~ 336 (419)
.... ++++++.+|++|.+++.. ++..+..|++.++... ++..+++.++++++|.+.++|.++..+.+.
T Consensus 252 ~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~------- 324 (562)
T PRK12492 252 PLMKEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDH------- 324 (562)
T ss_pred ccccCCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhC-------
Confidence 0122 357789999999999876 5666888888777643 899999999999999999999999988651
Q ss_pred cCchHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeecc
Q 014742 337 GGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYG 416 (419)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG 416 (419)
+.....++ .++|.+++||+++++.+.+.|++.+|+++++.||
T Consensus 325 ------------------------------~~~~~~~~--------~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG 366 (562)
T PRK12492 325 ------------------------------PGFKDLDF--------SALKLTNSGGTALVKATAERWEQLTGCTIVEGYG 366 (562)
T ss_pred ------------------------------cCcccccc--------cceeEEEeccccCCHHHHHHHHHHhCCceeeccC
Confidence 11111223 2899999999999999999999988999999999
Q ss_pred CCC
Q 014742 417 MVE 419 (419)
Q Consensus 417 ~tE 419 (419)
+||
T Consensus 367 ~tE 369 (562)
T PRK12492 367 LTE 369 (562)
T ss_pred ccc
Confidence 998
No 84
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.2e-35 Score=353.75 Aligned_cols=291 Identities=19% Similarity=0.224 Sum_probs=245.3
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHH
Q 014742 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (419)
Q Consensus 42 ~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA 121 (419)
..++.++|...++.+||++|+++. + +.+||.||.++++++|+.|++.|+++|++|+++++|++++++++||
T Consensus 3094 ~~~~~~l~~~~a~~~p~~~Av~~~---~------~~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~vv~~la 3164 (3956)
T PRK12467 3094 ERLVHQLIEAQVARTPEAPALVFG---D------QQLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVERSVEMIVALLA 3164 (3956)
T ss_pred cccHHHHHHHHHHhCCCcceEeeC---C------cccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeCCCHHHHHHHHH
Confidence 478999999999999999999975 3 4799999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeH
Q 014742 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (419)
Q Consensus 122 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (419)
|+++|++++||++.++.+++.++++.++++++|++....+.+... .....+.++...
T Consensus 3165 vl~aGa~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~------~~~~~~~~~~~~----------------- 3221 (3956)
T PRK12467 3165 VLKAGGAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAP------AGDTALTLDRLD----------------- 3221 (3956)
T ss_pred HHhhCcEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhhcccc------cCCceeeecchh-----------------
Confidence 999999999999999999999999999999999987654432111 011122222110
Q ss_pred HHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHH
Q 014742 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (419)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~ 281 (419)
. .......+.....++++++++|||||||.||||+++|+++.+.+......+ +++++|+++++.|++|..++
T Consensus 3222 --~-~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-----~~~~~d~~l~~~~~~fd~~~ 3293 (3956)
T PRK12467 3222 --L-NGYSENNPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAY-----ELDANDRVLLFMSFSFDGAQ 3293 (3956)
T ss_pred --h-cccCCCCCcccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhc-----CCCcCCEEEEecCccHhHHH
Confidence 0 001112223345688999999999999999999999999999998877766 88899999999999999988
Q ss_pred HHHHHHHhcCceEEEeCC---CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhcc
Q 014742 282 IIETHCIHKGCSIGFWRG---DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKK 358 (419)
Q Consensus 282 ~~~l~~l~~G~~ivl~~~---~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (419)
..++.+|..|+++++.+. ++..+++.|+++++|++.++|++++.+++..
T Consensus 3294 ~~~~~~L~~G~~l~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~---------------------------- 3345 (3956)
T PRK12467 3294 ERFLWTLICGGCLVVRDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDA---------------------------- 3345 (3956)
T ss_pred HHHHHHHhCCCEEEECCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhcc----------------------------
Confidence 789999999999999874 8999999999999999999999999886410
Q ss_pred CCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhh-CCceeeeccCCC
Q 014742 359 GMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGMVE 419 (419)
Q Consensus 359 ~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~tE 419 (419)
+..++ ++||.+++||+++++++.++|++.+ ++.+++.||+||
T Consensus 3346 -----------~~~~~--------~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~TE 3388 (3956)
T PRK12467 3346 -----------GGADC--------ASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGYGPTE 3388 (3956)
T ss_pred -----------cccCC--------CCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCcccch
Confidence 00011 3899999999999999999999877 678999999998
No 85
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.5e-35 Score=294.90 Aligned_cols=293 Identities=20% Similarity=0.234 Sum_probs=233.1
Q ss_pred CCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHH
Q 014742 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (419)
Q Consensus 41 ~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~l 120 (419)
...++.+.|...+..+||++|+.+. + ..+||.|+.++++++|++|++.|+++||+|+++++|+++++.+++
T Consensus 33 ~~~~~~~~~~~~a~~~p~~~a~~~~---~------~~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~l 103 (516)
T PRK13383 33 GGTNPYTLLAVTAARWPGRTAIIDD---D------GALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVF 103 (516)
T ss_pred cCCcHHHHHHHHHHHCCCCcEEEeC---C------CcEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHH
Confidence 4678999999999999999999864 2 379999999999999999999999999999999999999999999
Q ss_pred HHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeee
Q 014742 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (419)
Q Consensus 121 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (419)
||+++|++++|+++.++.+++.++++.++++++++++...+...... ..++.++....
T Consensus 104 a~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-------~~~~~~~~~~~--------------- 161 (516)
T PRK13383 104 AVGLLGADVVPISTEFRSDALAAALRAHHISTVVADNEFAERIAGAD-------DAVAVIDPATA--------------- 161 (516)
T ss_pred HHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhh-------cceEEeccchh---------------
Confidence 99999999999999999999999999999999999887654432211 11222221100
Q ss_pred HHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHH--hhhhhhhhhhcCccCCCCcEEEEecChHHH
Q 014742 201 WEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAE--VLSVDQMFVVTGKVCSEEDTYFSFLPLAHI 278 (419)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~--~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~ 278 (419)
...... ..+...++.++++|||||||.||+|.++|...... .......+ ++..+|++++.+|++|.
T Consensus 162 --~~~~~~-----~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~-----~~~~~d~~~~~~pl~h~ 229 (516)
T PRK13383 162 --GAEESG-----GRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRT-----RLRTGSRISVAMPMFHG 229 (516)
T ss_pred --hhhcCC-----CCCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhh-----ccCCCCeEEEecCCcch
Confidence 000000 01112356689999999999999999999743211 11112222 67788999999999999
Q ss_pred HHHHHHHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhc
Q 014742 279 YDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (419)
Q Consensus 279 ~g~~~~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (419)
+++..++.++..|+++++... +++.+++.++++++|.+.++|.++..+.+..+..
T Consensus 230 ~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~------------------------ 285 (516)
T PRK13383 230 LGLGMLMLTIALGGTVLTHRHFDAEAALAQASLHRADAFTAVPVVLARILELPPRV------------------------ 285 (516)
T ss_pred hhHHHHHHHHhcCCEEEECCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccc------------------------
Confidence 999888888999999998776 9999999999999999999999999886521100
Q ss_pred cCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
. +...+ .++|.+++||+++++++.++|.+.+|.++++.||+||
T Consensus 286 --------~---~~~~~--------~~lr~i~~gG~~l~~~~~~~~~~~~g~~v~~~YG~tE 328 (516)
T PRK13383 286 --------R---ARNPL--------PQLRVVMSSGDRLDPTLGQRFMDTYGDILYNGYGSTE 328 (516)
T ss_pred --------c---ccCCC--------CceEEEEECCCCCCHHHHHHHHHHcCchhhhcccccc
Confidence 0 00011 3899999999999999999999999999999999998
No 86
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=1.9e-35 Score=330.38 Aligned_cols=315 Identities=15% Similarity=0.083 Sum_probs=240.7
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeccCCC---CCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHH
Q 014742 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGK---VGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIA 118 (419)
Q Consensus 42 ~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~---~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~ 118 (419)
..++.++|...++.+||++|+++. +.. ....+.+||.||.++++++|++|++.|+++|++|+++++|+++++++
T Consensus 235 ~~~l~~~~~~~a~~~pd~~A~~~~---~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~ 311 (1389)
T TIGR03443 235 RGAIHDIFADNAEKHPDRTCVVET---PSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLVVA 311 (1389)
T ss_pred cCcHHHHHHHHHHhCCCCeEEEec---cccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHHHH
Confidence 468999999999999999999863 211 12236899999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCCh---hhHhhcCccCC---CCccEEEEecCCChhhHHHHH
Q 014742 119 MEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI---PSILSCLPRCC---LYLKTIVSFANVSSSQKKEAE 192 (419)
Q Consensus 119 ~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 192 (419)
++||+++|++++|++|.++.+++.++++.+++++++++.... ..+........ ..++.+...++.....
T Consensus 312 ~lA~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 386 (1389)
T TIGR03443 312 VMGVLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALALQDDGSLVG----- 386 (1389)
T ss_pred HHHHHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEEecccccccc-----
Confidence 999999999999999999999999999999999999876421 11111111000 1111121111100000
Q ss_pred HhCceeeeHHHHHhcC---CCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEE
Q 014742 193 ELGVSCFSWEEFLQLG---TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTY 269 (419)
Q Consensus 193 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~ 269 (419)
........+..... ..........++++++|+|||||||.||||+++|+++.+.+......+ ++.++|++
T Consensus 387 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~d~~ 459 (1389)
T TIGR03443 387 --GSLEGGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRF-----GLSENDKF 459 (1389)
T ss_pred --cccccccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhc-----CCCCCCEE
Confidence 00000000000000 001111234578999999999999999999999999999988876666 78889999
Q ss_pred EEecChHHHHHHHHHHHHHhcCceEEEeCC----CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHH
Q 014742 270 FSFLPLAHIYDQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLF 345 (419)
Q Consensus 270 l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~----~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~ 345 (419)
++..|++|..++..++.+|+.|+++++++. ++..+++.|+++++|++.++|.+++.|...
T Consensus 460 ~~~~~~~~d~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~---------------- 523 (1389)
T TIGR03443 460 TMLSGIAHDPIQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQ---------------- 523 (1389)
T ss_pred EEecCceecchHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhc----------------
Confidence 999999999888888999999999999864 688999999999999999999999887531
Q ss_pred HHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhh-CCceeeeccCCC
Q 014742 346 EFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGMVE 419 (419)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~tE 419 (419)
. ...+ ++||.+++||+++++...+++++.. ++++++.||+||
T Consensus 524 --------------------~----~~~~--------~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE 566 (1389)
T TIGR03443 524 --------------------A----TTPI--------PSLHHAFFVGDILTKRDCLRLQTLAENVCIVNMYGTTE 566 (1389)
T ss_pred --------------------c----cccC--------CCccEEEEecccCCHHHHHHHHHhCCCCEEEECccCCc
Confidence 0 0012 3899999999999999999988876 789999999998
No 87
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.3e-35 Score=297.84 Aligned_cols=313 Identities=17% Similarity=0.201 Sum_probs=242.2
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHH
Q 014742 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (419)
Q Consensus 40 ~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~ 119 (419)
....++.+.|...++.+|+++|+++. + +.+||.||.++++++|+.|.+.|+++||+|+++++|+.++++++
T Consensus 7 ~~~~~l~~~l~~~a~~~p~~~a~~~~----~-----~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~ 77 (540)
T PRK06164 7 PRADTLASLLDAHARARPDAVALIDE----D-----RPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLF 77 (540)
T ss_pred cCCCCHHHHHHHHHHhCCCCeEEecC----C-----CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHH
Confidence 44668999999999999999999853 2 47999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCCh-----hhHhhcCccCCCCccEEEEecCCChhhHHHHHHh
Q 014742 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI-----PSILSCLPRCCLYLKTIVSFANVSSSQKKEAEEL 194 (419)
Q Consensus 120 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (419)
+||+++|++++|+++..+.+++.++++.++++++|++.+.. ..+...........+.++.+++......
T Consensus 78 la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 151 (540)
T PRK06164 78 LACARLGATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADATP------ 151 (540)
T ss_pred HHHHHhCcEEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcccCC------
Confidence 99999999999999999999999999999999999987642 1111111111233445555542111000
Q ss_pred CceeeeHHHHHhcC-CCCC---CCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEE
Q 014742 195 GVSCFSWEEFLQLG-TLDC---ELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYF 270 (419)
Q Consensus 195 ~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l 270 (419)
......+.+..... .... ......++++++++|||||||.||+|+++|.++...+......+ ++..+++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~l 226 (540)
T PRK06164 152 APAPGARVQLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY-----GYDPGAVLL 226 (540)
T ss_pred CCCcccccccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc-----CCCCCCEEE
Confidence 00001111111111 0000 01223468899999999999999999999999999888877766 778899999
Q ss_pred EecChHHHHHHHHHHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHH
Q 014742 271 SFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAY 349 (419)
Q Consensus 271 ~~~pl~h~~g~~~~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 349 (419)
+.+|++|.+|+..++.++..|+++++.+. ++..+++.|+++++|+++++|.++..+.+..
T Consensus 227 ~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~------------------- 287 (540)
T PRK06164 227 AALPFCGVFGFSTLLGALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDTA------------------- 287 (540)
T ss_pred EcCCchhHHHHHHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhh-------------------
Confidence 99999999999888899999999999876 9999999999999999999999999987620
Q ss_pred HhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEcc-CCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 350 NYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGA-APLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G-~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
....++ .++|.+..+| .+...++.+++... |+++++.||+||
T Consensus 288 -------------------~~~~~~--------~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~YG~tE 330 (540)
T PRK06164 288 -------------------GERADF--------PSARLFGFASFAPALGELAALARAR-GVPLTGLYGSSE 330 (540)
T ss_pred -------------------cccCCC--------cceeeeeeccCCcchHHHHHHHhhc-CCceecceeecc
Confidence 011112 2778776665 55666777777765 899999999998
No 88
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=4.1e-35 Score=295.30 Aligned_cols=290 Identities=19% Similarity=0.264 Sum_probs=238.1
Q ss_pred CHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHH
Q 014742 44 SPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACN 123 (419)
Q Consensus 44 tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~ 123 (419)
++.+.|.+.++.+|+++|+... + ..+||.||.+++.++|+.|.+.|+++|++|+++++|+.+++++++||+
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~~----~-----~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~ 71 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRYQ----G-----QELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSI 71 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEcC----C-----cEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHH
Confidence 4778999999999999999764 3 479999999999999999999999999999999999999999999999
Q ss_pred HcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeHHH
Q 014742 124 SQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEE 203 (419)
Q Consensus 124 ~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (419)
++|++++|+++.++.+++.++++..++++++++......... .. ++.++. .+.
T Consensus 72 ~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~--------~~-~~~~~~------------------~~~ 124 (502)
T TIGR01734 72 KSGHAYIPVDTSIPSERIEMIIEAAGPELVIHTAELSIDAVG--------TQ-IITLSA------------------LEQ 124 (502)
T ss_pred HhCCEEeCCCCcChHHHHHHHHHhcCCCEEEecccccccccC--------Cc-eEEchH------------------hhh
Confidence 999999999999999999999999999999998765432211 11 122111 011
Q ss_pred HHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHH
Q 014742 204 FLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII 283 (419)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~ 283 (419)
...............+++.++++|||||||.||+|.++|.++...+......+ ....++++++.+|++|.+++..
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~-----~~~~~~~~l~~~p~~~~~~~~~ 199 (502)
T TIGR01734 125 AETSGGPVSFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADF-----PLSEGKQFLNQAPFSFDLSVMD 199 (502)
T ss_pred hhhhcCCccccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhC-----CCCCCceEEeecCceechhHHH
Confidence 11111111111234578899999999999999999999999998888766655 7788899999999999999888
Q ss_pred HHHHHhcCceEEEeCC----CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccC
Q 014742 284 ETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKG 359 (419)
Q Consensus 284 ~l~~l~~G~~ivl~~~----~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (419)
++.++..|+++++.+. ++..+++.+.+++++.+.++|.++..++..
T Consensus 200 ~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~------------------------------ 249 (502)
T TIGR01734 200 LYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLD------------------------------ 249 (502)
T ss_pred HHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhc------------------------------
Confidence 8899999999998864 789999999999999999999999876531
Q ss_pred CCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhh-CCceeeeccCCC
Q 014742 360 MPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGMVE 419 (419)
Q Consensus 360 ~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~tE 419 (419)
.......+ ++++.++++|+++++++.+++.+.+ ++++++.||+||
T Consensus 250 -------~~~~~~~~--------~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~tE 295 (502)
T TIGR01734 250 -------PNFNQENY--------PHLTHFLFCGEELPVKTAKALLERFPKATIYNTYGPTE 295 (502)
T ss_pred -------cccccccC--------CcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCccCCc
Confidence 00111112 3899999999999999999999988 889999999998
No 89
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=2.9e-34 Score=293.03 Aligned_cols=321 Identities=21% Similarity=0.314 Sum_probs=243.3
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHH-hCCCCCCCeEEEEcCCchhHHHHHH
Q 014742 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMR-SRGVNPGDRCGIYGSNCPEWIIAME 120 (419)
Q Consensus 42 ~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~-~~g~~~gd~V~l~~~n~~~~~~~~l 120 (419)
..++.+.|..+++.+|+++|+++. + +.+||.||.++++++|+.|. +.|+++|++|+++++|+++++++++
T Consensus 24 ~~~~~~~l~~~~~~~~~~~a~~~~----~-----~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~l 94 (560)
T PRK08751 24 FRTVAEVFATSVAKFADRPAYHSF----G-----KTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATF 94 (560)
T ss_pred CCcHHHHHHHHHHhCCCCceEEEC----C-----ceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHH
Confidence 468999999999999999999864 3 57999999999999999997 6899999999999999999999999
Q ss_pred HHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCCh---hhH--------H
Q 014742 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSS---SQK--------K 189 (419)
Q Consensus 121 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--------~ 189 (419)
||+++|++++|++|.++.+++.+++..++++++++++.....+....... ....++..+.... ... .
T Consensus 95 A~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (560)
T PRK08751 95 GVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADT--PVKQVITTGLGDMLGFPKAALVNFVVKY 172 (560)
T ss_pred HHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCC--CccEEEEechhhhcccccchhhhhhhhh
Confidence 99999999999999999999999999999999999987665443332221 1223333210000 000 0
Q ss_pred -H--HHHh-CceeeeHHHHHhcC-CCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCC
Q 014742 190 -E--AEEL-GVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCS 264 (419)
Q Consensus 190 -~--~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~ 264 (419)
. .... ......+.+..... ....+.....++++++++|||||||.||+|.++|.++...+......+.... ...
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~-~~~ 251 (560)
T PRK08751 173 VKKLVPEYRINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTG-KLE 251 (560)
T ss_pred hhccccccCCCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhcccc-ccC
Confidence 0 0000 00122344443332 1122233456789999999999999999999999999887776554431110 122
Q ss_pred C-CcEEEEecChHHHHHHHH-HHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCch
Q 014742 265 E-EDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGAL 340 (419)
Q Consensus 265 ~-~d~~l~~~pl~h~~g~~~-~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~ 340 (419)
. .+++++.+|++|.+++.. .+..+..|+++++... ++..+++.++++++|.+.++|.++..+.+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~----------- 320 (560)
T PRK08751 252 EGCEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNT----------- 320 (560)
T ss_pred CCCceEEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcC-----------
Confidence 2 467788999999999875 5667778888877654 899999999999999999999999888641
Q ss_pred HHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 341 SKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
+..+..+++ ++|.+++||+++++.+.+.|++.+|+++++.||+||
T Consensus 321 --------------------------~~~~~~~l~--------~lr~v~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE 365 (560)
T PRK08751 321 --------------------------PGFDQIDFS--------SLKMTLGGGMAVQRSVAERWKQVTGLTLVEAYGLTE 365 (560)
T ss_pred --------------------------cCcCCcchh--------hheeeeeCCCCCCHHHHHHHHHHhCCeEEEeecccc
Confidence 111222343 899999999999999999999988999999999998
No 90
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.1e-34 Score=296.22 Aligned_cols=319 Identities=24% Similarity=0.413 Sum_probs=238.0
Q ss_pred CCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHH
Q 014742 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (419)
Q Consensus 41 ~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~l 120 (419)
..+++.++|...+..+|+++|+++. + +.+||.||.+++.++|+.|.+.|+++||+|+++++|+++++++++
T Consensus 22 ~~~~~~~~~~~~a~~~p~~~a~~~~----~-----~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~l 92 (563)
T PRK06710 22 DIQPLHKYVEQMASRYPEKKALHFL----G-----KDITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYY 92 (563)
T ss_pred CcccHHHHHHHHHHHCCCceEEEec----C-----eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHH
Confidence 4578999999999999999999864 3 579999999999999999999999999999999999999999999
Q ss_pred HHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCC---hhhH---------
Q 014742 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVS---SSQK--------- 188 (419)
Q Consensus 121 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--------- 188 (419)
||+++|++++|+++..+.+++.++++.++++++++++............ .....++...... .+..
T Consensus 93 A~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (563)
T PRK06710 93 GTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSA--TKIEHVIVTRIADFLPFPKNLLYPFVQKK 170 (563)
T ss_pred HHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchh--hccceeEEeccccccccccccccchhhcc
Confidence 9999999999999999999999999999999999998655443222111 1122222211000 0000
Q ss_pred --HHH--HHhCceeeeHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccC-
Q 014742 189 --KEA--EELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVC- 263 (419)
Q Consensus 189 --~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~- 263 (419)
... .+.......|+.+...............+++++++|||||||.||+|.++|+++..++......+ ...
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~----~~~~ 246 (563)
T PRK06710 171 QSNLVVKVSESETIHLWNSVEKEVNTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWL----YNCK 246 (563)
T ss_pred cccccccccccchhhhhhhhhhccccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhc----cCCC
Confidence 000 00000011122221111111111112357899999999999999999999999976543322211 122
Q ss_pred CCCcEEEEecChHHHHHHHH-HHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchH
Q 014742 264 SEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALS 341 (419)
Q Consensus 264 ~~~d~~l~~~pl~h~~g~~~-~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~ 341 (419)
..++++++++|++|.+++.. ++.++..|+++++.+. ++..+++.|+++++|++.++|.++..+++.
T Consensus 247 ~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~------------ 314 (563)
T PRK06710 247 EGEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNS------------ 314 (563)
T ss_pred CCCceEEEeCchHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcC------------
Confidence 34568899999999999876 5578999999999876 999999999999999999999999987641
Q ss_pred HHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 342 KKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
+......++ ++|.+++||+++++++.+++++.+|.++++.||+||
T Consensus 315 -------------------------~~~~~~~~~--------~lr~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE 359 (563)
T PRK06710 315 -------------------------PLLKEYDIS--------SIRACISGSAPLPVEVQEKFETVTGGKLVEGYGLTE 359 (563)
T ss_pred -------------------------CccccCChh--------hhhheeeCCCcCCHHHHHHHHHhhCCCEeccccccc
Confidence 111111222 789999999999999999999988999999999998
No 91
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3e-34 Score=290.60 Aligned_cols=294 Identities=17% Similarity=0.225 Sum_probs=234.0
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhC-CCCCCCeEEEEcCCchhHHHHHH
Q 014742 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSR-GVNPGDRCGIYGSNCPEWIIAME 120 (419)
Q Consensus 42 ~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~-g~~~gd~V~l~~~n~~~~~~~~l 120 (419)
..++.++|...+. ++++++.+. + +.+||.||.++++++|++|++. |++++++|+++++|+++++++++
T Consensus 4 ~~~~~~~l~~~a~--~~~~a~~~~----~-----~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~l 72 (529)
T PRK07867 4 APTVAELLLPLAE--DDDRGLYFE----D-----SFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLG 72 (529)
T ss_pred cccHHHHHHHhcc--cCCceEEEC----C-----cEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHH
Confidence 4578899988875 789998864 3 5799999999999999999997 89999999999999999999999
Q ss_pred HHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeee
Q 014742 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (419)
Q Consensus 121 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (419)
||+++|++++|+++..+.+++.++++.++++++|+++.....+.... ... .++..+. ..
T Consensus 73 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~----~~~-~~~~~~~----------------~~ 131 (529)
T PRK07867 73 AAALSGIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLD----PGV-RVINVDS----------------PA 131 (529)
T ss_pred HHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhc----cCc-eEEEecc----------------cc
Confidence 99999999999999999999999999999999999987665443321 111 1222221 11
Q ss_pred HHHHHhcC-CCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHH
Q 014742 201 WEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (419)
Q Consensus 201 ~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~ 279 (419)
|.++.... ..........++++++++|||||||.||+|+++|+++..++..+...+ +++.+|++++.+|++|.+
T Consensus 132 ~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~-----~~~~~d~~l~~~pl~~~~ 206 (529)
T PRK07867 132 WADELAAHRDAEPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRF-----GLGPDDVCYVSMPLFHSN 206 (529)
T ss_pred HHHHhcccCCCCCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhh-----CCCcccEEEEecchhHHH
Confidence 33333322 111222334678999999999999999999999999998888766666 788899999999999999
Q ss_pred HHHH-HHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhc
Q 014742 280 DQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (419)
Q Consensus 280 g~~~-~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (419)
++.. ++.++..|+++++.+. ++..+++.++++++|++.++|..+..++...+
T Consensus 207 ~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~-------------------------- 260 (529)
T PRK07867 207 AVMAGWAVALAAGASIALRRKFSASGFLPDVRRYGATYANYVGKPLSYVLATPE-------------------------- 260 (529)
T ss_pred HHHHHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCC--------------------------
Confidence 9876 6678999999999876 99999999999999999999999988754100
Q ss_pred cCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
..... . +++|. +.||+++++.+ .+|.+.+|.++++.||+||
T Consensus 261 -------~~~~~----~--------~~lr~-~~gg~~~~~~~-~~~~~~~g~~l~~~YG~TE 301 (529)
T PRK07867 261 -------RPDDA----D--------NPLRI-VYGNEGAPGDI-ARFARRFGCVVVDGFGSTE 301 (529)
T ss_pred -------ccccc----c--------cceEE-EecCCCChHHH-HHHHHHhCCcEEEeecccc
Confidence 00000 0 26784 45888887765 6677778999999999998
No 92
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=1.1e-34 Score=319.00 Aligned_cols=310 Identities=18% Similarity=0.204 Sum_probs=239.5
Q ss_pred CCCCHHHHHHHHHHhCC-CCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHH
Q 014742 41 GLESPWQFFCDSAKRIP-NNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (419)
Q Consensus 41 ~~~tl~~~l~~~a~~~p-d~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~ 119 (419)
...++.+.|.+.++++| ++.++.+. ++ +.+||.|+.++++++|+.|++ |+++||+|+++++|++++++++
T Consensus 629 ~~~~~~~~l~~~~~~~~~~~~ai~~~---~~-----~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~~ 699 (1140)
T PRK06814 629 YDRTLFEALIEAAKIHGFKKLAVEDP---VN-----GPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVTF 699 (1140)
T ss_pred ccCCHHHHHHHHHHHcCCCCeEeECC---CC-----CccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHHH
Confidence 35678888888888886 55666542 22 479999999999999999976 9999999999999999999999
Q ss_pred HHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHh-hcCccCCCCccEEEEecCCChhhHHHHHHhCcee
Q 014742 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSIL-SCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSC 198 (419)
Q Consensus 120 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (419)
+||+++|++++|+|++.+.+++.++++.++++++|++++..+... ............++.+++...... ..
T Consensus 700 la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--------~~ 771 (1140)
T PRK06814 700 FALQSAGRVPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVRAQIG--------LA 771 (1140)
T ss_pred HHHHHCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhhccCC--------hH
Confidence 999999999999999999999999999999999999875433210 000001112233444433211000 00
Q ss_pred eeHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHH
Q 014742 199 FSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHI 278 (419)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~ 278 (419)
..+.+......+....+...++++++++|||||||.||||.++|+++...+......+ +.+++|++++.+|++|.
T Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~-----~~~~~d~~l~~~pl~h~ 846 (1140)
T PRK06814 772 DKIKGLLAGRFPLVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARI-----DFSPEDKVFNALPVFHS 846 (1140)
T ss_pred HHHHHHhhccCCccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhh-----CCCCcCEEEEecchHHH
Confidence 0111111111111111234678999999999999999999999999998888876666 78889999999999999
Q ss_pred HHHHH-HHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhh
Q 014742 279 YDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGN 355 (419)
Q Consensus 279 ~g~~~-~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (419)
+++.. ++.++..|+++++.+. +.+.+.+.++++++|++.++|++++.+.+.
T Consensus 847 ~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~-------------------------- 900 (1140)
T PRK06814 847 FGLTGGLVLPLLSGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARY-------------------------- 900 (1140)
T ss_pred HHHHHHHHHHHHcCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhh--------------------------
Confidence 99965 7788999999999875 677889999999999999999999887541
Q ss_pred hccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 356 MKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
.+..++ +++|.+++||+++++++.+.+++.+|.++++.||+||
T Consensus 901 -------------~~~~~~--------~~lr~v~~gg~~l~~~~~~~~~~~~~~~~~~~YG~TE 943 (1140)
T PRK06814 901 -------------AHPYDF--------RSLRYVFAGAEKVKEETRQTWMEKFGIRILEGYGVTE 943 (1140)
T ss_pred -------------cccccc--------cceeEEEEcCCcCCHHHHHHHHHHhCCcEEecccccc
Confidence 001112 3899999999999999999999999999999999998
No 93
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-34 Score=290.43 Aligned_cols=280 Identities=22% Similarity=0.302 Sum_probs=225.1
Q ss_pred HHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeE
Q 014742 50 CDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITY 129 (419)
Q Consensus 50 ~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 129 (419)
+.+++.+||++|+.+. ..+ ..+||.|+.+.++++|.+|++.|+.+||+|+++++|+++++++++||+++|+++
T Consensus 2 ~~~a~~~p~~~a~~~~---~~~----~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~ 74 (488)
T PRK09088 2 AFHARLQPQRLAAVDL---ALG----RRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIY 74 (488)
T ss_pred chhhhhCCCceEEEec---CCC----cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEE
Confidence 3567789999999753 111 579999999999999999999999999999999999999999999999999999
Q ss_pred EeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeHHHHHhcC-
Q 014742 130 VPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLG- 208 (419)
Q Consensus 130 vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 208 (419)
+|+++.++.+++.++++.++++++|+++....... . ...++++....
T Consensus 75 v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~-----------~---------------------~~~~~~~~~~~~ 122 (488)
T PRK09088 75 VPLNWRLSASELDALLQDAEPRLLLGDDAVAAGRT-----------D---------------------VEDLAAFIASAD 122 (488)
T ss_pred EeeCccCCHHHHHHHHHhCCCCEEEEcchhhcccc-----------c---------------------ccchhhhhhhcc
Confidence 99999999999999999999999999865432100 0 00111111111
Q ss_pred -CCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHH-HHH
Q 014742 209 -TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETH 286 (419)
Q Consensus 209 -~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~-~l~ 286 (419)
...........+++++++|||||||.||+|.++|+++...+....... ....+|++++.+|++|.+++.. ++.
T Consensus 123 ~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~d~~l~~~pl~~~~g~~~~~~~ 197 (488)
T PRK09088 123 ALEPADTPSIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLG-----RVDAHSSFLCDAPMFHIIGLITSVRP 197 (488)
T ss_pred ccccccCCCCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhh-----CCCCCcEEEEecchHHHHHHHHHHHH
Confidence 011112233567899999999999999999999999988777665544 6778899999999999999987 667
Q ss_pred HHhcCceEEEeCC-CHHHHHHHhh--hhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccCCCCC
Q 014742 287 CIHKGCSIGFWRG-DVRYLMEDIQ--ELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQN 363 (419)
Q Consensus 287 ~l~~G~~ivl~~~-~~~~~~~~i~--~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (419)
++..|+++++.+. ++..++..+. ++++|+++++|+++..+.+.
T Consensus 198 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~---------------------------------- 243 (488)
T PRK09088 198 VLAVGGSILVSNGFEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQ---------------------------------- 243 (488)
T ss_pred HHhcCCEEEEcCCCCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhC----------------------------------
Confidence 8999999998876 8888888885 58999999999999887541
Q ss_pred CchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 364 KAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 364 ~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
+..+...+ +++|.+++||++++....+++.+. |+++++.||+||
T Consensus 244 ---~~~~~~~~--------~~l~~~~~gG~~~~~~~~~~~~~~-g~~v~~~YG~TE 287 (488)
T PRK09088 244 ---PGFDAAAL--------RHLTALFTGGAPHAAEDILGWLDD-GIPMVDGFGMSE 287 (488)
T ss_pred ---cCcCcccc--------ccceEEEecCCCCCHHHHHHHHHh-CCceeeeecccc
Confidence 11111122 289999999999999998888875 999999999998
No 94
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=5e-35 Score=296.16 Aligned_cols=292 Identities=15% Similarity=0.161 Sum_probs=220.5
Q ss_pred HHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHH
Q 014742 45 PWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNS 124 (419)
Q Consensus 45 l~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~ 124 (419)
+.+.|...++.+|+++++++. +.+.++++||.||.++++++|++|.+. ++||+|+++++|+++++++++||++
T Consensus 4 ~~~~l~~~~~~~~~~~a~~~~-----~~~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~~ 76 (525)
T PRK05851 4 LAAALSDAMTASGRDLVVLDR-----ESGLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAWL 76 (525)
T ss_pred HHHHHHHHhcCCCCceEEeCC-----CCCcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHHH
Confidence 889999999999999999864 333568899999999999999999987 7999999999999999999999999
Q ss_pred cCCeEEeecc-------CCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCce
Q 014742 125 QAITYVPLYD-------TLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVS 197 (419)
Q Consensus 125 ~G~~~vpl~~-------~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (419)
+|+++++++. ....+++..+++.++++++|++......+..... . +.+.+
T Consensus 77 ~G~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~----~----~~~~~--------------- 133 (525)
T PRK05851 77 AGAAVSILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDS----S----VTVHD--------------- 133 (525)
T ss_pred cCCCCcCCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhc----c----ccccc---------------
Confidence 9998654321 1223455677899999999998765544322110 0 00100
Q ss_pred eeeHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCC-CCcEEEEecChH
Q 014742 198 CFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCS-EEDTYFSFLPLA 276 (419)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~-~~d~~l~~~pl~ 276 (419)
+....... .........++++++|+|||||||.||||+++|+++...+......+ +.. .+|++++++|++
T Consensus 134 ---~~~~~~~~-~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~-----~~~~~~d~~l~~~pl~ 204 (525)
T PRK05851 134 ---LATAAHTN-RSASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARV-----GLDAATDVGCSWLPLY 204 (525)
T ss_pred ---cccccccc-ccccCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHh-----CCCCCCCeEEEcCCCc
Confidence 00000000 00111223578999999999999999999999999999888877666 777 889999999999
Q ss_pred HHHHHHHHHHHHhcCceEEEeCC-----CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHh
Q 014742 277 HIYDQIIETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNY 351 (419)
Q Consensus 277 h~~g~~~~l~~l~~G~~ivl~~~-----~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (419)
|.+++..++.+++.|+++++.+. ++..+++.+.++++|++...|.++..+.+. ..
T Consensus 205 h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~-~~------------------- 264 (525)
T PRK05851 205 HDMGLAFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKY-AR------------------- 264 (525)
T ss_pred cCccHHHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHh-hc-------------------
Confidence 99999888889999999999762 678899999999999875544444443221 00
Q ss_pred hhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHh---hCC---ceeeeccCCC
Q 014742 352 KLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVT---SGA---PLTQGYGMVE 419 (419)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~---~~~---~v~~~YG~tE 419 (419)
..+..+++ +||.+++||+++++++.++|.+. +|+ .+++.||+||
T Consensus 265 ----------------~~~~~~l~--------~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE 314 (525)
T PRK05851 265 ----------------RVSDVDLG--------ALRVALNGGEPVDCDGFERFATAMAPFGFDAGAAAPSYGLAE 314 (525)
T ss_pred ----------------cccCCCHH--------HhheeEeccccCCHHHHHHHHHHHhhcCCChhhcccccchhh
Confidence 00111232 89999999999999999998875 455 4999999998
No 95
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.6e-34 Score=291.97 Aligned_cols=324 Identities=20% Similarity=0.281 Sum_probs=245.2
Q ss_pred CCCCCCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhH
Q 014742 36 LESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW 115 (419)
Q Consensus 36 ~~~~~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~ 115 (419)
+..+.+..++.+.|..+++.+|+++|+.+. + +.+||.||.+++.++|+.|.+.|+++|++|+++++|++++
T Consensus 26 ~~~~~~~~~l~~~l~~~a~~~p~~~al~~~---~------~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~ 96 (567)
T PRK06178 26 PEYPHGERPLTEYLRAWARERPQRPAIIFY---G------HVITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQF 96 (567)
T ss_pred CCCCcCcccHHHHHHHHHHHCCCceEEEEC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHH
Confidence 334456788999999999999999999875 3 4799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCCh-hhHHHHH--
Q 014742 116 IIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSS-SQKKEAE-- 192 (419)
Q Consensus 116 ~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-- 192 (419)
+++++||+++|++++|+++..+.+++.++++.++++++++++...+.+.+..... ..+.++....... +......
T Consensus 97 ~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~ 174 (567)
T PRK06178 97 HIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAET--SLRHVIVTSLADVLPAEPTLPLP 174 (567)
T ss_pred HHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccC--CcceEEEeccccccccccccccc
Confidence 9999999999999999999999999999999999999999988777665443222 2334433321110 0000000
Q ss_pred -H---hCceeeeHHHHHhcC---CCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCC
Q 014742 193 -E---LGVSCFSWEEFLQLG---TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSE 265 (419)
Q Consensus 193 -~---~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~ 265 (419)
. .......+.++.... ..........++++++++|||||||.||+|++||.+++..+....... .....
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~----~~~~~ 250 (567)
T PRK06178 175 DSLRAPRLAAAGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVA----VVGGE 250 (567)
T ss_pred cccccccccccccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHh----ccCCC
Confidence 0 000001111221111 111122345678999999999999999999999999987665533321 25678
Q ss_pred CcEEEEecChHHHHHHHH-HHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHH
Q 014742 266 EDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKK 343 (419)
Q Consensus 266 ~d~~l~~~pl~h~~g~~~-~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~ 343 (419)
.|++++.+|++|.+|+.. ++.++..|+++++.+. ++..++..++++++|.+.++|..+..+...
T Consensus 251 ~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~-------------- 316 (567)
T PRK06178 251 DSVFLSFLPEFWIAGENFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDH-------------- 316 (567)
T ss_pred CcEEEEecchHHHHHHHHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhC--------------
Confidence 899999999999999875 7788999999999987 999999999999999999999999887541
Q ss_pred HHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEE--EccCCCCHHHHHHHHHhhCCceee-eccCCC
Q 014742 344 LFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAML--SGAAPLPIHVEEFLRVTSGAPLTQ-GYGMVE 419 (419)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~--~~G~~l~~~~~~~~~~~~~~~v~~-~YG~tE 419 (419)
+.....+++ +++.+. +.|+++++++.+.|++.+|..++. .||+||
T Consensus 317 -----------------------~~~~~~~l~--------~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~YG~tE 364 (567)
T PRK06178 317 -----------------------PRFAEYDLS--------SLRQVRVVSFVKKLNPDYRQRWRALTGSVLAEAAWGMTE 364 (567)
T ss_pred -----------------------CCCCCCCcc--------hheeeeeccccccCCHHHHHHHHHHhCCccccccccccc
Confidence 001111122 555543 446899999999999999887765 799998
No 96
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=3.3e-34 Score=288.76 Aligned_cols=288 Identities=19% Similarity=0.213 Sum_probs=238.1
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHH
Q 014742 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (419)
Q Consensus 43 ~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~ 122 (419)
+++.+.|.+++..+|+++++... + +.+||.||.+.++++|..|.+.|+++|++|+++++|+.+++++++||
T Consensus 2 ~~~~~~l~~~a~~~p~~~~~~~~----~-----~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~ 72 (503)
T PRK04813 2 MDIIETIEEFAQTQPDFPAYDYL----G-----EKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGA 72 (503)
T ss_pred chHHHHHHHHHHhCCCceEEEeC----C-----cEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 56889999999999999998864 2 47999999999999999999999999999999999999999999999
Q ss_pred HHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeHH
Q 014742 123 NSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWE 202 (419)
Q Consensus 123 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (419)
+++|++++|+++.++.+++..+++.+++++++++....... .... ...++
T Consensus 73 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~----------------------~~~~~ 122 (503)
T PRK04813 73 VKAGHAYIPVDVSSPAERIEMIIEVAKPSLIIATEELPLEI--------LGIP----------------------VITLD 122 (503)
T ss_pred HHcCCEEecCCCCChHHHHHHHHHhcCCCEEEecccccccc--------cCCc----------------------EEehH
Confidence 99999999999999999999999999999999987641100 0110 11111
Q ss_pred HHHhc---CCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHH
Q 014742 203 EFLQL---GTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (419)
Q Consensus 203 ~~~~~---~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~ 279 (419)
++... ...........++++++++|||||||.||+|.++|+++...+......+ .+..+++++..+|++|..
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~ 197 (503)
T PRK04813 123 ELKDIFATGNPYDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDF-----ALPEGPQFLNQAPYSFDL 197 (503)
T ss_pred HhhhhhhccccccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHc-----CCCcCceeeecCCcchhH
Confidence 11111 1111112334678899999999999999999999999998888766655 778899999999999999
Q ss_pred HHHHHHHHHhcCceEEEeCC----CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhh
Q 014742 280 DQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGN 355 (419)
Q Consensus 280 g~~~~l~~l~~G~~ivl~~~----~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (419)
++..++.++..|+++++.+. ++..+++.++++++|++..+|.+++.+....
T Consensus 198 ~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~------------------------- 252 (503)
T PRK04813 198 SVMDLYPTLASGGTLVALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDP------------------------- 252 (503)
T ss_pred hHHHHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhh-------------------------
Confidence 98778889999999999875 7899999999999999999999998764310
Q ss_pred hccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhh-CCceeeeccCCC
Q 014742 356 MKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGMVE 419 (419)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~tE 419 (419)
.....++ +++|.++++|+++++.+.+++.+.+ +.++++.||+||
T Consensus 253 ------------~~~~~~~--------~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE 297 (503)
T PRK04813 253 ------------SFNEEHL--------PNLTHFLFCGEELPHKTAKKLLERFPSATIYNTYGPTE 297 (503)
T ss_pred ------------ccCcccC--------CCceEEEEecCcCCHHHHHHHHHHCCCceEEeCcccch
Confidence 0111112 3899999999999999999999998 789999999998
No 97
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-34 Score=296.17 Aligned_cols=311 Identities=18% Similarity=0.211 Sum_probs=238.7
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCc
Q 014742 33 DGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNC 112 (419)
Q Consensus 33 ~~~~~~~~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~ 112 (419)
.++|..-.++.++.++|...++.+|+..++ + .+....+.+||.||..++.++|.+|++.|+++||+|+++++|+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~ 84 (579)
T PRK09192 11 SSLPRRYADFPTLVEALDYAALGEAGMNFY-D-----RRGQLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETD 84 (579)
T ss_pred ccccccccchhhHHHHHHHhhccCCceEEE-e-----cCCCEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCc
Confidence 345555577899999999999998866554 2 2223347899999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHcCCeEEeeccCCC-------hhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCCh
Q 014742 113 PEWIIAMEACNSQAITYVPLYDTLG-------ANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSS 185 (419)
Q Consensus 113 ~~~~~~~lA~~~~G~~~vpl~~~~~-------~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (419)
++++++++||+++|++++|+++..+ .+++.++++.++++++|+++.....+.+.... ...+.
T Consensus 85 ~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~----~~~~~------- 153 (579)
T PRK09192 85 GDFVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHG----NPLLH------- 153 (579)
T ss_pred hhHHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhcc----ccccc-------
Confidence 9999999999999999999987543 58899999999999999998765554432211 01111
Q ss_pred hhHHHHHHhCceeeeHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhh-hhhhcCccCC
Q 014742 186 SQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQ-MFVVTGKVCS 264 (419)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~-~~~~~~~~~~ 264 (419)
..++.++..............++++++++|||||||.||||.++|++++..+..... .+ ++.
T Consensus 154 ------------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~-----~~~ 216 (579)
T PRK09192 154 ------------VLSHAWFKALPEADVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGL-----KVR 216 (579)
T ss_pred ------------eeehhhhcccCCCccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcc-----cCC
Confidence 122333322221122223456789999999999999999999999999988877655 44 788
Q ss_pred CCcEEEEecChHHHHHHHH-HHHHHhcCceEEEeCC-----CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccC
Q 014742 265 EEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGG 338 (419)
Q Consensus 265 ~~d~~l~~~pl~h~~g~~~-~l~~l~~G~~ivl~~~-----~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~ 338 (419)
++|++++.+|++|.+++.. ++.++..|+++++.+. ++..+++.+.++++++++..|..+..+.....
T Consensus 217 ~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~------- 289 (579)
T PRK09192 217 PGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVN------- 289 (579)
T ss_pred CCCeEEEeCCCCCcchhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhc-------
Confidence 8999999999999999986 6678999999987752 68899999999999987765555544432100
Q ss_pred chHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhC------Ccee
Q 014742 339 ALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG------APLT 412 (419)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~------~~v~ 412 (419)
.......+++ ++|.+++||+++++.+.+.+.+.++ ..++
T Consensus 290 ---------------------------~~~~~~~~l~--------~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~ 334 (579)
T PRK09192 290 ---------------------------SKDLAELDLS--------CWRVAGIGADMIRPDVLHQFAEAFAPAGFDDKAFM 334 (579)
T ss_pred ---------------------------cccccccchh--------hhheeEecCccCCHHHHHHHHHHHHhcCCChhhcc
Confidence 0001122343 8999999999999999999998773 2499
Q ss_pred eeccCCC
Q 014742 413 QGYGMVE 419 (419)
Q Consensus 413 ~~YG~tE 419 (419)
+.||+||
T Consensus 335 ~~yG~TE 341 (579)
T PRK09192 335 PSYGLAE 341 (579)
T ss_pred ccccccc
Confidence 9999998
No 98
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.4e-34 Score=289.13 Aligned_cols=313 Identities=21% Similarity=0.252 Sum_probs=236.6
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHH
Q 014742 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (419)
Q Consensus 42 ~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA 121 (419)
.+++.++|.+.++.+|+++|+.+. + ..+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++|
T Consensus 17 ~~~~~~~~~~~~~~~~~~~a~~~~----~-----~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA 87 (545)
T PRK08162 17 PLTPLSFLERAAEVYPDRPAVIHG----D-----RRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFG 87 (545)
T ss_pred cCCHHHHHHHHHHHCCCCeEEEEC----C-----eEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHH
Confidence 468889999999999999999864 2 4799999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeH
Q 014742 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (419)
Q Consensus 122 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (419)
|+++|++++|+++..+.+++..+++.+++++++++.+....+.+..... +.. ..+.++...... ......+..++
T Consensus 88 ~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~---~~~~~~~~~~~ 162 (545)
T PRK08162 88 VPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALL-PGP-KPLVIDVDDPEY---PGGRFIGALDY 162 (545)
T ss_pred HHHhCcEEeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhC-CCC-ceEEEecCcccc---ccCCCcccccH
Confidence 9999999999999999999999999999999999988766554332211 111 122222111000 00001123356
Q ss_pred HHHHhcCCCCCCC-CCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHH
Q 014742 202 EEFLQLGTLDCEL-PPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYD 280 (419)
Q Consensus 202 ~~~~~~~~~~~~~-~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g 280 (419)
+++.......... .....+++++++|||||||.||||+++|+++...+......+ .+..++++++.+|++|.++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~-----~~~~~~~~l~~~pl~h~~~ 237 (545)
T PRK08162 163 EAFLASGDPDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAW-----GMPKHPVYLWTLPMFHCNG 237 (545)
T ss_pred HHHhccCCccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-----CCCCCCeeEeccCcHhhhh
Confidence 6665443221111 122345789999999999999999999999877665543333 6777889999999999999
Q ss_pred HHHHHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccC
Q 014742 281 QIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKG 359 (419)
Q Consensus 281 ~~~~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (419)
+...+...+.|++.++... ++..+++.++++++|++.++|.+++.|++...
T Consensus 238 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~---------------------------- 289 (545)
T PRK08162 238 WCFPWTVAARAGTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPA---------------------------- 289 (545)
T ss_pred HHHHHHHHHHccEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCcc----------------------------
Confidence 8764444445555555555 99999999999999999999999999865200
Q ss_pred CCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 360 MPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 360 ~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
. ....+ .+.+.++++|+++++++.+.+++ +++++++.||+||
T Consensus 290 ------~---~~~~~--------~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~YG~tE 331 (545)
T PRK08162 290 ------E---WRAGI--------DHPVHAMVAGAAPPAAVIAKMEE-IGFDLTHVYGLTE 331 (545)
T ss_pred ------c---cccCC--------ccceEEEECCCCCCHHHHHHHHH-hCCceeecccccc
Confidence 0 00001 14455678999999999999987 4999999999998
No 99
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.9e-34 Score=343.58 Aligned_cols=294 Identities=18% Similarity=0.257 Sum_probs=244.8
Q ss_pred CCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHH
Q 014742 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (419)
Q Consensus 41 ~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~l 120 (419)
...++.++|...++.+||++|+++. + +.+||+||.++++++|+.|++.|+++|++|+++++++++++++++
T Consensus 510 ~~~~~~~~~~~~a~~~pd~~Al~~~---~------~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vv~~l 580 (3956)
T PRK12467 510 APDCVHQLIEAQARQHPERPALVFG---E------QVLSYAELNRQANRLAHVLIAAGVGPDVLVGIAVERSIEMVVGLL 580 (3956)
T ss_pred CCCCHHHHHHHHHHHCCCCeEEEeC---C------ceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHH
Confidence 4568999999999999999999975 3 479999999999999999999999999999999999999999999
Q ss_pred HHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeee
Q 014742 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (419)
Q Consensus 121 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (419)
||+++|++++|+++.++.+++.++++.+++++++++........ ..... .++.++...
T Consensus 581 ail~aG~~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~-----~~~~~-~~~~~~~~~---------------- 638 (3956)
T PRK12467 581 AVLKAGGAYVPLDPEYPQDRLAYMLDDSGVRLLLTQSHLLAQLP-----VPAGL-RSLCLDEPA---------------- 638 (3956)
T ss_pred HHHHhCcEEeccCCCChHHHHHHHHHhcCCCEEEechhhhhhcc-----cccCc-cEEEecccc----------------
Confidence 99999999999999999999999999999999999985432210 00111 122222111
Q ss_pred HHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHH
Q 014742 201 WEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYD 280 (419)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g 280 (419)
+.........+.....++++++++|||||||.||||+++|+++.+.+......+ ++.++|+++...|++|..+
T Consensus 639 --~~~~~~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~th~~l~~~~~~~~~~~-----~~~~~d~~l~~~~~~fd~~ 711 (3956)
T PRK12467 639 --DLLCGYSGHNPEVALDPDNLAYVIYTSGSTGQPKGVAISHGALANYVCVIAERL-----QLAADDSMLMVSTFAFDLG 711 (3956)
T ss_pred --ccccccCCCCCCCCCCCCCeEEEEECCCCCCCcCEEEEecHHHHHHHHHHHHhc-----CCCCCCEEEEecCccHhHH
Confidence 000111111222345678999999999999999999999999999998877766 8889999999999999999
Q ss_pred HHHHHHHHhcCceEEEeCC----CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhh
Q 014742 281 QIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNM 356 (419)
Q Consensus 281 ~~~~l~~l~~G~~ivl~~~----~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (419)
+..++.+|..|+++++.+. ++..+++.|+++++|++.++|++++.+++...
T Consensus 712 ~~~~~~~L~~G~~lv~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~------------------------- 766 (3956)
T PRK12467 712 VTELFGALASGATLHLLPPDCARDAEAFAALMADQGVTVLKIVPSHLQALLQASR------------------------- 766 (3956)
T ss_pred HHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEcCHHHHHHHHhhhc-------------------------
Confidence 8889999999999999863 89999999999999999999999999865210
Q ss_pred ccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhh-CCceeeeccCCC
Q 014742 357 KKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGMVE 419 (419)
Q Consensus 357 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~tE 419 (419)
.. .+ .++|.+++||+++++++.+.|.+.+ ++++++.||+||
T Consensus 767 ------------~~--~~--------~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE 808 (3956)
T PRK12467 767 ------------VA--LP--------RPQRALVCGGEALQVDLLARVRALGPGARLINHYGPTE 808 (3956)
T ss_pred ------------cc--cC--------CcccEEEEEeecCCHHHHHHHHHhCCCCEEEeCcCCCh
Confidence 00 01 2789999999999999999999976 789999999998
No 100
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=1.6e-34 Score=349.19 Aligned_cols=293 Identities=19% Similarity=0.220 Sum_probs=244.6
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHH
Q 014742 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (419)
Q Consensus 42 ~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA 121 (419)
..++.++|.+.++.+||++|+.+. + ..+||.||.++++++|+.|++.|+++|++|+++++|+++++++++|
T Consensus 510 ~~~~~~~~~~~a~~~p~~~A~~~~---~------~~~TY~eL~~~~~~lA~~L~~~gv~~g~~V~l~~~~s~~~i~~~la 580 (5163)
T PRK12316 510 QRGVHRLFEEQVERTPEAPALAFG---E------ETLDYAELNRRANRLAHALIERGVGPDVLVGVAMERSIEMVVALLA 580 (5163)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEeC---C------ceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 568999999999999999999874 3 4799999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeH
Q 014742 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (419)
Q Consensus 122 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (419)
|+++|++++|+++.++.+++.++++.+++++++++......... . .. ..++.++...
T Consensus 581 ~~~aG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~-~----~~-~~~~~~~~~~----------------- 637 (5163)
T PRK12316 581 ILKAGGAYVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLPL-A----AG-VQVLDLDRPA----------------- 637 (5163)
T ss_pred HHHcCCEEeccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCCc-c----cC-ceEEEecCcc-----------------
Confidence 99999999999999999999999999999999998765432210 0 01 1223332211
Q ss_pred HHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHH
Q 014742 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (419)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~ 281 (419)
.+........+.....++++++|+|||||||.||||+++|+++.+.+......+ +++.+|++++.+|++|..++
T Consensus 638 -~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~fd~~~ 711 (5163)
T PRK12316 638 -AWLEGYSEENPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAY-----GLGVGDTVLQKTPFSFDVSV 711 (5163)
T ss_pred -hhhccCCCCCCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhc-----CCCCCCEEEeeCCeehHHHH
Confidence 001111112222344678999999999999999999999999999998877766 88899999999999999998
Q ss_pred HHHHHHHhcCceEEEeCC----CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhc
Q 014742 282 IIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (419)
Q Consensus 282 ~~~l~~l~~G~~ivl~~~----~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (419)
..++.+|..|+++++.+. ++..+++.|+++++|++.++|++++.|++.
T Consensus 712 ~~~~~~L~~G~~l~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~---------------------------- 763 (5163)
T PRK12316 712 WEFFWPLMSGARLVVAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQD---------------------------- 763 (5163)
T ss_pred HHHHHHHhCCCEEEECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhc----------------------------
Confidence 889999999999999842 899999999999999999999999998641
Q ss_pred cCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhh-CCceeeeccCCC
Q 014742 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGMVE 419 (419)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~tE 419 (419)
.... .+ +++|.+++||+++++++.+.|.+.+ +.++++.||+||
T Consensus 764 ---------~~~~--~~--------~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE 807 (5163)
T PRK12316 764 ---------EDVA--SC--------TSLRRIVCSGEALPADAQEQVFAKLPQAGLYNLYGPTE 807 (5163)
T ss_pred ---------cccc--cC--------CCccEEEEeeccCCHHHHHHHHHhCCCCeEEeCcCcCh
Confidence 0000 12 3899999999999999999997766 789999999998
No 101
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=2.3e-34 Score=347.92 Aligned_cols=293 Identities=20% Similarity=0.247 Sum_probs=243.2
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHH
Q 014742 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (419)
Q Consensus 42 ~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA 121 (419)
..++.+.|...++.+|+++|+++. + ..+||.||.++++++|+.|++.|+++|++|+++++|+++++++++|
T Consensus 2002 ~~~~~~~~~~~a~~~p~~~A~~~~---~------~~lTy~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~~~~~lA 2072 (5163)
T PRK12316 2002 GPGVHQRIAEQAARAPEAIAVVFG---D------QHLSYAELDSRANRLAHRLRARGVGPEVRVAIAAERSFELVVALLA 2072 (5163)
T ss_pred CCCHHHHHHHHHHhCCCCeEEEcC---C------CeEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 458999999999999999999975 3 4799999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeH
Q 014742 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (419)
Q Consensus 122 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (419)
|+++|++++||++.++.+++.++++.+++++++++......+... .... .+.++..
T Consensus 2073 il~aGa~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~-----~~~~-~~~~~~~------------------ 2128 (5163)
T PRK12316 2073 VLKAGGAYVPLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPLP-----AGVA-RLPLDRD------------------ 2128 (5163)
T ss_pred HHhhceEEeecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhcccc-----cccc-eEeccch------------------
Confidence 999999999999999999999999999999999988655432110 1111 1111110
Q ss_pred HHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHH
Q 014742 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (419)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~ 281 (419)
..+.. .....+.....++++++|+|||||||.||||+++|+++.+.+......+ +++++|+++.+.|++|..++
T Consensus 2129 ~~~~~-~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-----~~~~~d~~l~~~~~~fd~~~ 2202 (5163)
T PRK12316 2129 AEWAD-YPDTAPAVQLAGENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGERY-----ELSPADCELQFMSFSFDGAH 2202 (5163)
T ss_pred hhhhc-cCccCCCCCCCCCCeEEEEeCccCCCCCCEeEEccHHHHHHHHHHHHhc-----CCCCcceEEEecCchHHHHH
Confidence 00000 0111223345689999999999999999999999999999998877766 88899999999999999888
Q ss_pred HHHHHHHhcCceEEEeCC---CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhcc
Q 014742 282 IIETHCIHKGCSIGFWRG---DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKK 358 (419)
Q Consensus 282 ~~~l~~l~~G~~ivl~~~---~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (419)
..++.+|..|+++++.+. ++..+++.|+++++|++.++|.+++.+.+....
T Consensus 2203 ~~~~~~L~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~-------------------------- 2256 (5163)
T PRK12316 2203 EQWFHPLLNGARVLIRDDELWDPEQLYDEMERHGVTILDFPPVYLQQLAEHAER-------------------------- 2256 (5163)
T ss_pred HHHHHHHhCCCEEEeCCcccCCHHHHHHHHHHcCCeEEEcChHHHHHHHhhhhc--------------------------
Confidence 779999999999987754 889999999999999999999999998652110
Q ss_pred CCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhh-CCceeeeccCCC
Q 014742 359 GMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGMVE 419 (419)
Q Consensus 359 ~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~tE 419 (419)
... . .+||.+++||+++++++.++|.+.+ +..+++.||+||
T Consensus 2257 -----------~~~-~--------~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE 2298 (5163)
T PRK12316 2257 -----------DGR-P--------PAVRVYCFGGEAVPAASLRLAWEALRPVYLFNGYGPTE 2298 (5163)
T ss_pred -----------ccC-C--------cceeEEEEecccCCHHHHHHHHHhCCCcEEEECccchh
Confidence 000 0 2799999999999999999999876 678999999998
No 102
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=2.4e-34 Score=345.26 Aligned_cols=295 Identities=18% Similarity=0.188 Sum_probs=245.4
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHH
Q 014742 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (419)
Q Consensus 42 ~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA 121 (419)
..++.++|.+.++++||++|+++. ++ .+||.||.++++++|+.|++.|+++|++|+++++++++++++++|
T Consensus 3719 ~~~~~~~~~~~~~~~p~~~Av~~~---~~------~~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v~~la 3789 (4334)
T PRK05691 3719 EQSYVRLFEAQVAAHPQRIAASCL---DQ------QWSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLDLLGMIVG 3789 (4334)
T ss_pred ccCHHHHHHHHHHhCCCceEEEcC---CC------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 568999999999999999999976 43 799999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCC-CCccEEEEecCCChhhHHHHHHhCceeee
Q 014742 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCC-LYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (419)
Q Consensus 122 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (419)
++++|+++|||++.++.+++.++++.+++++++++............... ...+.++..++.
T Consensus 3790 vlkaG~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 3852 (4334)
T PRK05691 3790 SFKAGAGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCANRPRLLVWEEV----------------- 3852 (4334)
T ss_pred HHhhCcEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccccccceeeeccc-----------------
Confidence 99999999999999999999999999999999999875543322211110 011122222211
Q ss_pred HHHHHhcC-CCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHH
Q 014742 201 WEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (419)
Q Consensus 201 ~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~ 279 (419)
.... ....+.....+++.++++|||||||.||||+++|+++.+.+......+ +++++|+++...++++..
T Consensus 3853 ----~~~~~~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~-----~~~~~~~~~~~~s~~fd~ 3923 (4334)
T PRK05691 3853 ----QAGEVASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYL-----ALSEADVIAQTASQSFDI 3923 (4334)
T ss_pred ----ccccccccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhc-----CCCccceEEEecCCchhH
Confidence 0001 111122334678999999999999999999999999999998877766 899999999999999999
Q ss_pred HHHHHHHHHhcCceEEEeCC----CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhh
Q 014742 280 DQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGN 355 (419)
Q Consensus 280 g~~~~l~~l~~G~~ivl~~~----~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (419)
++..++.+|..|+++++.+. ++..+++.++++++|++..+|++++.+++..
T Consensus 3924 s~~~~~~~l~~G~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~------------------------- 3978 (4334)
T PRK05691 3924 SVWQFLAAPLFGARVEIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAED------------------------- 3978 (4334)
T ss_pred HHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhc-------------------------
Confidence 98889999999999999864 7899999999999999999999998876410
Q ss_pred hccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhh-CCceeeeccCCC
Q 014742 356 MKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGMVE 419 (419)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~tE 419 (419)
...+ .+||.+++||+++++++.++|.+.+ ++++++.||+||
T Consensus 3979 ---------------~~~~--------~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE 4020 (4334)
T PRK05691 3979 ---------------RQAL--------DGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAYGPAE 4020 (4334)
T ss_pred ---------------cccC--------CCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCccCcc
Confidence 0001 3899999999999999999998876 789999999998
No 103
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.9e-33 Score=286.99 Aligned_cols=320 Identities=18% Similarity=0.263 Sum_probs=239.3
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHh-CCCCCCCeEEEEcCCchhHHHHHH
Q 014742 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRS-RGVNPGDRCGIYGSNCPEWIIAME 120 (419)
Q Consensus 42 ~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~-~g~~~gd~V~l~~~n~~~~~~~~l 120 (419)
..++.+.|..+++.+|+++|+++. + +.+||.||.++++++|.+|++ .|+++|++|+++++|+.+++++++
T Consensus 22 ~~~l~~~l~~~a~~~p~~~a~~~~----~-----~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~l 92 (560)
T PRK08974 22 YQSLVDMFEQAVARYADQPAFINM----G-----EVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALF 92 (560)
T ss_pred cccHHHHHHHHHHhCCCCceEEEC----C-----ccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHH
Confidence 467999999999999999999864 3 479999999999999999984 899999999999999999999999
Q ss_pred HHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChh--hHH-----HHH-
Q 014742 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSS--QKK-----EAE- 192 (419)
Q Consensus 121 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-----~~~- 192 (419)
||+++|++++|+++..+.+++.++++.+++++++++......+.+.... .....++........ ... ...
T Consensus 93 A~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (560)
T PRK08974 93 GILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFK--TPVKHVILTRMGDQLSTAKGTLVNFVVKY 170 (560)
T ss_pred HHHHcCcEEeccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhh--cCcceEEEecccccccccccccccchhhh
Confidence 9999999999999999999999999999999999987654433332211 112222221110000 000 000
Q ss_pred -------HhCceeeeHHHHHhcC-CCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCC
Q 014742 193 -------ELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCS 264 (419)
Q Consensus 193 -------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~ 264 (419)
.......++.+..... ..........++++++++|||||||.||+|.++|.++..++......+. .....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~--~~~~~ 248 (560)
T PRK08974 171 IKRLVPKYHLPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYG--PLLHP 248 (560)
T ss_pred cccccccccCCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhc--cccCC
Confidence 0000112222222222 1111222346789999999999999999999999999887654433220 01233
Q ss_pred CCcEEEEecChHHHHHHHH-HHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchH
Q 014742 265 EEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALS 341 (419)
Q Consensus 265 ~~d~~l~~~pl~h~~g~~~-~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~ 341 (419)
.++.++..+|++|.+++.. .+.++..|+++++... ++..+++.++++++|.+.++|.+++.+.+.
T Consensus 249 ~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~------------ 316 (560)
T PRK08974 249 GKELVVTALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNN------------ 316 (560)
T ss_pred CccEEEEeCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhC------------
Confidence 4678889999999999876 6677889999887653 889999999999999999999999998651
Q ss_pred HHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 342 KKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
.......+ +++|.+++||+++++.+.++|++.+|.++++.||+||
T Consensus 317 -------------------------~~~~~~~~--------~~lr~~~~gg~~~~~~~~~~~~~~~g~~~~~~YG~tE 361 (560)
T PRK08974 317 -------------------------EEFQELDF--------SSLKLSVGGGMAVQQAVAERWVKLTGQYLLEGYGLTE 361 (560)
T ss_pred -------------------------cCcccCCc--------cceeEEEecCccCCHHHHHHHHHHhCCcEEeeecccc
Confidence 00111122 2899999999999999999999988999999999998
No 104
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2e-33 Score=283.76 Aligned_cols=302 Identities=19% Similarity=0.243 Sum_probs=234.5
Q ss_pred HHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeE
Q 014742 50 CDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITY 129 (419)
Q Consensus 50 ~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 129 (419)
...++.+||++|+++. +++ +.+||.||.+++++++++|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 4 ~~~a~~~p~~~a~~~~---~~~----~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~ 76 (511)
T PRK13391 4 GIHAQTTPDKPAVIMA---STG----EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYY 76 (511)
T ss_pred hhhHhhCCCceEEEec---CCC----CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEE
Confidence 4677889999999864 222 579999999999999999999999999999999999999999999999999999
Q ss_pred EeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeHHHHHhcCC
Q 014742 130 VPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT 209 (419)
Q Consensus 130 vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (419)
+|+++..+.+++.++++.+++++++++......+.+..... ......+....... ......+++......
T Consensus 77 ~~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~ 146 (511)
T PRK13391 77 TCVNSHLTPAEAAYIVDDSGARALITSAAKLDVARALLKQC-PGVRHRLVLDGDGE---------LEGFVGYAEAVAGLP 146 (511)
T ss_pred eccccccCHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcC-CCceEEEEecCCCC---------CcccccHHHHhcCCC
Confidence 99999999999999999999999999987766554433222 23333344432111 011233444332211
Q ss_pred CCCCCCCCCCCceEEEEeCCCCCCCCCeEEe--echhHHHHh---hhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHH
Q 014742 210 LDCELPPKKKTNISTIMYTSGTTGEPKGVVL--TNQAIVAEV---LSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIE 284 (419)
Q Consensus 210 ~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~--sh~~l~~~~---~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~ 284 (419)
.......++.++++|||||||.||||++ +|.++.... ......+ .+..++++++.+|++|.+++...
T Consensus 147 ---~~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~p~~h~~~~~~~ 218 (511)
T PRK13391 147 ---ATPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLW-----GFRSDMVYLSPAPLYHSAPQRAV 218 (511)
T ss_pred ---CCCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhc-----CCCCCCeEEEcCCHHHHHHHHHH
Confidence 1111234567899999999999999995 466654332 2222333 66788999999999999998888
Q ss_pred HHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccCCCCC
Q 014742 285 THCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQN 363 (419)
Q Consensus 285 l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (419)
+.++..|+++++.+. ++..+++.++++++|++.++|.++..+.+....
T Consensus 219 ~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~------------------------------- 267 (511)
T PRK13391 219 MLVIRLGGTVIVMEHFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEE------------------------------- 267 (511)
T ss_pred HHHHHcCceEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchh-------------------------------
Confidence 889999999999877 999999999999999999999999887642110
Q ss_pred CchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 364 KAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 364 ~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
..+.+++ .++|.+++||+++++++.+++++.+|..+++.||+||
T Consensus 268 ----~~~~~~~--------~~l~~~~~gg~~~~~~~~~~~~~~~g~~v~~~YG~tE 311 (511)
T PRK13391 268 ----VRDKYDL--------SSLEVAIHAAAPCPPQVKEQMIDWWGPIIHEYYAATE 311 (511)
T ss_pred ----hcccCCc--------cceeEEEEccCCCCHHHHHHHHHHcCCceeeeecccc
Confidence 0011122 3899999999999999999999988999999999998
No 105
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.7e-34 Score=290.23 Aligned_cols=308 Identities=17% Similarity=0.238 Sum_probs=228.4
Q ss_pred CHHHHHHHHHHhCCCCCceeeeeccCC---CCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHH
Q 014742 44 SPWQFFCDSAKRIPNNQMLGGRKVSDG---KVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (419)
Q Consensus 44 tl~~~l~~~a~~~pd~~ai~~~~~~~~---~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~l 120 (419)
++.+.|.+++..+|+++|+.+. +. ..+..+.+||.||..+++++|++|++.| .+||+|+++++|+++++++++
T Consensus 2 s~~~~l~~~a~~~p~~~a~~~~---~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~l 77 (578)
T PRK05850 2 SVPSLLRERASLQPDDAAFTFI---DYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFL 77 (578)
T ss_pred cHHHHHHHHHhcCCCceEEEEE---ccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHH
Confidence 6889999999999999999864 21 1122468999999999999999999999 689999999999999999999
Q ss_pred HHHHcCCeEEeecc---CCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccC-CCCccEEEEecCCChhhHHHHHHhCc
Q 014742 121 ACNSQAITYVPLYD---TLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRC-CLYLKTIVSFANVSSSQKKEAEELGV 196 (419)
Q Consensus 121 A~~~~G~~~vpl~~---~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (419)
||+++|++++|+++ ..+.+++.++++.+++++|+++++....+.+..... ......++..+..
T Consensus 78 A~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 144 (578)
T PRK05850 78 GALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSAPPVIEVDLL------------- 144 (578)
T ss_pred HHHHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccccccceEeeccc-------------
Confidence 99999999999997 457889999999999999999987655443321100 0011122222110
Q ss_pred eeeeHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhh-hhhcCccCCCCcEEEEecCh
Q 014742 197 SCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQM-FVVTGKVCSEEDTYFSFLPL 275 (419)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~-~~~~~~~~~~~d~~l~~~pl 275 (419)
++ ............++++++++|||||||.||||.++|++++.++...... +.........++++++.+|+
T Consensus 145 ------~~--~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl 216 (578)
T PRK05850 145 ------DL--DSPRGSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPF 216 (578)
T ss_pred ------cc--ccCCccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCC
Confidence 00 0000011123456899999999999999999999999999877664432 21000113457899999999
Q ss_pred HHHHHHHH-HHHHHhcCceEEEeCC-----CHHHHHHHhhhhcCeEEEecchHHHHHHH-HHHHHhhccCchHHHHHHHH
Q 014742 276 AHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYT-GISNKISSGGALSKKLFEFA 348 (419)
Q Consensus 276 ~h~~g~~~-~l~~l~~G~~ivl~~~-----~~~~~~~~i~~~~~t~l~~~P~~~~~l~~-~~~~~~~~~~~~~~~~~~~~ 348 (419)
+|.+|+.. ++.+++.|+++++.+. ++..+++.+.++++++. .+|.++..+.. ...
T Consensus 217 ~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~----------------- 278 (578)
T PRK05850 217 YHDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTS----------------- 278 (578)
T ss_pred CCCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcc-----------------
Confidence 99999876 7889999999999863 78999999999999855 66665443321 100
Q ss_pred HHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhC------CceeeeccCCC
Q 014742 349 YNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG------APLTQGYGMVE 419 (419)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~------~~v~~~YG~tE 419 (419)
.......+++ ++|.+++||+++++++.++|.+.|+ ..+++.||+||
T Consensus 279 -----------------~~~~~~~~~~--------~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE 330 (578)
T PRK05850 279 -----------------DDDMAGLDLG--------GVLGIISGSERVHPATLKRFADRFAPFNLRETAIRPSYGLAE 330 (578)
T ss_pred -----------------hhhhcCcchh--------hheeEEECcCCCCHHHHHHHHHHHHhcCcCcccccCccchhh
Confidence 0001111232 8999999999999999999988873 36999999998
No 106
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=6.1e-34 Score=341.85 Aligned_cols=292 Identities=19% Similarity=0.264 Sum_probs=243.1
Q ss_pred CCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHH
Q 014742 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (419)
Q Consensus 41 ~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~l 120 (419)
...++.++|.+.++.+||++|+.+. + ..+||.||.++++++|++|++.|+++|++|+++++++++++++++
T Consensus 1129 ~~~~l~~~~~~~a~~~p~~~Al~~~---~------~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~s~~~iv~~l 1199 (4334)
T PRK05691 1129 AQAWLPELLNEQARQTPERIALVWD---G------GSLDYAELHAQANRLAHYLRDKGVGPDVCVAIAAERSPQLLVGLL 1199 (4334)
T ss_pred ccCCHHHHHHHHHHhCCCCeEEEEC---C------ceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHH
Confidence 3568999999999999999999875 3 379999999999999999999999999999999999999999999
Q ss_pred HHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeee
Q 014742 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (419)
Q Consensus 121 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (419)
|++++|++++|+++.++.+++.++++.++++++|++......+... ... ..+..+...
T Consensus 1200 ailkaG~~~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~-----~~~-~~~~~~~~~---------------- 1257 (4334)
T PRK05691 1200 AILKAGGAYVPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQA-----EGV-SAIALDSLH---------------- 1257 (4334)
T ss_pred HHHHhCCEEEecCcCChHHHHHHHHHhcCCCEEEecchhhhhcccc-----cCc-eEEeecccc----------------
Confidence 9999999999999999999999999999999999997654432111 000 111111110
Q ss_pred HHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHH
Q 014742 201 WEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYD 280 (419)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g 280 (419)
.. ......+.....++++++++|||||||.||||+++|+++.+.+......+ ++.++|++++..|++|..+
T Consensus 1258 ~~----~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-----~~~~~d~~l~~~~~~fd~s 1328 (4334)
T PRK05691 1258 LD----SWPSQAPGLHLHGDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATY-----ALDDSDVLMQKAPISFDVS 1328 (4334)
T ss_pred cc----ccCCCCCCCCCCCCCeEEEEEcCCCCCCCceeEeecHHHHHHHHHHHHhc-----CCCCCCEEEEeCCccHHHH
Confidence 00 00011122234578999999999999999999999999999988876666 8889999999999999988
Q ss_pred HHHHHHHHhcCceEEEeCC----CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhh
Q 014742 281 QIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNM 356 (419)
Q Consensus 281 ~~~~l~~l~~G~~ivl~~~----~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (419)
+..++.+|..|+++++.+. ++..+++.|+++++|++.++|++++.+.+.
T Consensus 1329 ~~~~~~~L~~G~~l~i~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~--------------------------- 1381 (4334)
T PRK05691 1329 VWECFWPLITGCRLVLAGPGEHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDE--------------------------- 1381 (4334)
T ss_pred HHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhC---------------------------
Confidence 8888999999999999753 899999999999999999999999988641
Q ss_pred ccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhh-CCceeeeccCCC
Q 014742 357 KKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGMVE 419 (419)
Q Consensus 357 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~-~~~v~~~YG~tE 419 (419)
+ ....+ ++||.+++||+++++++.++|.+.+ ++++++.||+||
T Consensus 1382 ----------~--~~~~~--------~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE 1425 (4334)
T PRK05691 1382 ----------P--LAAAC--------TSLRRLFSGGEALPAELRNRVLQRLPQVQLHNRYGPTE 1425 (4334)
T ss_pred ----------c--ccccC--------CcccEEEEeecCCCHHHHHHHHHhCCCcEEEeCCCcCh
Confidence 0 00012 3899999999999999999999987 789999999998
No 107
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.6e-33 Score=280.57 Aligned_cols=273 Identities=23% Similarity=0.244 Sum_probs=224.1
Q ss_pred CCHHHHH-HHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHH
Q 014742 43 ESPWQFF-CDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (419)
Q Consensus 43 ~tl~~~l-~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA 121 (419)
+++.+.+ ..+++.+|+++|+.+. + +.+||.||.++++++|+.|.+.|+++|++|+++++|+++++++++|
T Consensus 2 ~~~~~~~~~~~a~~~~~~~a~~~~----~-----~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la 72 (458)
T PRK09029 2 MIFSDWPWRHWAQVRPQAIALRLN----D-----EVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLA 72 (458)
T ss_pred chhhcChHHHHHHhCCCceeeecC----C-----cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHH
Confidence 3455554 5668899999999853 3 4799999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeH
Q 014742 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (419)
Q Consensus 122 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (419)
|+++|++++|+++..+.+++..+++.+++++++++.+... +.. +.... +
T Consensus 73 ~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~--------~~~~~----------------------~ 121 (458)
T PRK09029 73 LLQCGARVLPLNPQLPQPLLEELLPSLTLDFALVLEGENT-FSA--------LTSLH----------------------L 121 (458)
T ss_pred HHHcCCEEeecCCCCCHHHHHHHHHhcCCCEEEEcCcccc-hhh--------ccccc----------------------c
Confidence 9999999999999999999999999999999999876432 100 00000 0
Q ss_pred HHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHH
Q 014742 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (419)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~ 281 (419)
. ...........++++++++|||||||.||||.+||++++..+......+ +...+|++++.+|++|.+++
T Consensus 122 ~-----~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~~~~l~~~p~~h~~g~ 191 (458)
T PRK09029 122 Q-----LVEGAHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLM-----PFTAQDSWLLSLPLFHVSGQ 191 (458)
T ss_pred c-----cccccCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcC-----CCCccceEEEecCcHhhhhh
Confidence 0 0001112234578899999999999999999999999999888866655 77889999999999999998
Q ss_pred HHHHHHHhcCceEEEeCCCHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccCCC
Q 014742 282 IIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMP 361 (419)
Q Consensus 282 ~~~l~~l~~G~~ivl~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (419)
..++.++..|+++++.+. ..+++.+ .++|.+..+|+++..++..
T Consensus 192 ~~~~~~l~~G~~v~~~~~--~~~~~~i--~~~t~~~~~P~~~~~l~~~-------------------------------- 235 (458)
T PRK09029 192 GIVWRWLYAGATLVVRDK--QPLEQAL--AGCTHASLVPTQLWRLLDN-------------------------------- 235 (458)
T ss_pred HHHHHHHhCCceEEeCCh--HHHHHHH--hhceeeecChHHHHHHHhc--------------------------------
Confidence 877788999999998764 4566666 3799999999999887641
Q ss_pred CCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 362 QNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 362 ~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
.. . . .++|.+++||+++++.+.+++... |.++++.||+||
T Consensus 236 ----~~-~----~--------~~l~~i~~gG~~~~~~~~~~~~~~-g~~~~~~YG~tE 275 (458)
T PRK09029 236 ----RS-E----P--------LSLKAVLLGGAAIPVELTEQAEQQ-GIRCWCGYGLTE 275 (458)
T ss_pred ----cc-c----C--------CcceEEEECCCCCCHHHHHHHHHc-CCcEeccccccc
Confidence 00 0 0 279999999999999999999874 999999999998
No 108
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4e-33 Score=280.87 Aligned_cols=295 Identities=18% Similarity=0.231 Sum_probs=222.5
Q ss_pred HHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEE
Q 014742 51 DSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYV 130 (419)
Q Consensus 51 ~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v 130 (419)
.+++.+|+++|+.+. +++ +.+||.||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 5 ~~a~~~p~~~a~~~~---~~~----~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~ 77 (501)
T PRK13390 5 THAQIAPDRPAVIVA---ETG----EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYIT 77 (501)
T ss_pred hhhhhCCCCcEEEec---CCC----eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEe
Confidence 467789999999864 222 5799999999999999999999999999999999999999999999999999999
Q ss_pred eeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeHHHHHhcCCC
Q 014742 131 PLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTL 210 (419)
Q Consensus 131 pl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (419)
|+++.++.+++.++++.++++++++++......... .. .....+.+..... ....+++......
T Consensus 78 ~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~---~~~~~~~~~~~~~-----------~~~~~~~~~~~~~- 141 (501)
T PRK13390 78 AINHHLTAPEADYIVGDSGARVLVASAALDGLAAKV-GA---DLPLRLSFGGEID-----------GFGSFEAALAGAG- 141 (501)
T ss_pred ccccCCCHHHHHHHHHhcCCcEEEEcchhhhHHHHh-hh---ccceEEEecCccc-----------ccccHHHHhcccC-
Confidence 999999999999999999999999987543322111 11 1111122211100 1223333322111
Q ss_pred CCCCCCCCCCceEEEEeCCCCCCCCCeEEe--echhHHHHhh----hhhhhhhhcCccCCCCcEEEEecChHHHHHHHHH
Q 014742 211 DCELPPKKKTNISTIMYTSGTTGEPKGVVL--TNQAIVAEVL----SVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIE 284 (419)
Q Consensus 211 ~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~--sh~~l~~~~~----~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~ 284 (419)
+ .....++.++|+|||||||.||||++ +|.++..... .....+ .+..+|++++.+|++|.+++...
T Consensus 142 --~-~~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~h~~~~~~~ 213 (501)
T PRK13390 142 --P-RLTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFY-----DISESDIYYSSAPIYHAAPLRWC 213 (501)
T ss_pred --C-CCCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHh-----CCCCCCeEEecccchhhhHHHHH
Confidence 0 01122357999999999999999996 4555543221 111223 67788999999999999998765
Q ss_pred HHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccCCCCC
Q 014742 285 THCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQN 363 (419)
Q Consensus 285 l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (419)
+..+..|+++++.+. ++..+++.|+++++|++.++|+++..+.+....
T Consensus 214 ~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~------------------------------- 262 (501)
T PRK13390 214 SMVHALGGTVVLAKRFDAQATLGHVERYRITVTQMVPTMFVRLLKLDAD------------------------------- 262 (501)
T ss_pred HHHHhcCceEEEcCCcCHHHHHHHHHHcCCeEEEecHHHHHHHHhccch-------------------------------
Confidence 556778999998876 999999999999999999999999988642100
Q ss_pred CchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 364 KAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 364 ~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
.....++ .++|.+++||+++++++.+.+++.+|.++++.||+||
T Consensus 263 ----~~~~~~~--------~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~YG~tE 306 (501)
T PRK13390 263 ----VRTRYDV--------SSLRAVIHAAAPCPVDVKHAMIDWLGPIVYEYYSSTE 306 (501)
T ss_pred ----hcccCCh--------hhhheEEEcCCCCCHHHHHHHHHhcCCceeeeecccc
Confidence 0011112 2889999999999999999999988999999999998
No 109
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.6e-33 Score=277.12 Aligned_cols=267 Identities=22% Similarity=0.291 Sum_probs=219.3
Q ss_pred HHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEe
Q 014742 52 SAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVP 131 (419)
Q Consensus 52 ~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vp 131 (419)
.++..++++|+.+. + +.+||.||.++++++|..|+ ++|+|+++++|+++++++++||+++|++++|
T Consensus 9 ~~~~~~~~~a~~~~----~-----~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~ 74 (471)
T PRK07787 9 VAAAADIADAVRIG----G-----RVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVP 74 (471)
T ss_pred hhcccCCceEEEeC----C-----cEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEee
Confidence 34456888888764 3 58999999999999999996 5799999999999999999999999999999
Q ss_pred eccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeHHHHHhcCCCC
Q 014742 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLD 211 (419)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (419)
+++..+.+++..+++.+++++++++.+... ..++....... ...+
T Consensus 75 l~~~~~~~~l~~~l~~~~~~~il~~~~~~~----------~~~~~~~~~~~---------------~~~~---------- 119 (471)
T PRK07787 75 VPPDSGVAERRHILADSGAQAWLGPAPDDP----------AGLPHVPVRLH---------------ARSW---------- 119 (471)
T ss_pred cCCCCChHHHHHHHHhcCCCEEEecCCccc----------ccccceeeecc---------------cccc----------
Confidence 999999999999999999999999863110 01111100000 0001
Q ss_pred CCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHH-HHHHHhc
Q 014742 212 CELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHK 290 (419)
Q Consensus 212 ~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~-~l~~l~~ 290 (419)
.......++++++++|||||||.||+|.++|+++...+......+ ++..+|++++.+|++|.+|+.. ++.++..
T Consensus 120 ~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~ 194 (471)
T PRK07787 120 HRYPEPDPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAW-----QWTADDVLVHGLPLFHVHGLVLGVLGPLRI 194 (471)
T ss_pred ccCCCCCCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhc-----CCCccceeEeccCCeeechhHHHHHHHHhc
Confidence 011123568999999999999999999999999999888766655 7788899999999999999986 7889999
Q ss_pred CceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccCCCCCCchhhH
Q 014742 291 GCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLL 369 (419)
Q Consensus 291 G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (419)
|+++++.+. ++..+++.|+ +++|.+.++|.++..+.+.. ..
T Consensus 195 G~~~~~~~~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~----------------------------------~~--- 236 (471)
T PRK07787 195 GNRFVHTGRPTPEAYAQALS-EGGTLYFGVPTVWSRIAADP----------------------------------EA--- 236 (471)
T ss_pred CCEEEecCCCCHHHHHHHHh-hCceEEEcchHHHHHHHhCc----------------------------------cc---
Confidence 999999876 9999999999 99999999999999886410 00
Q ss_pred HHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 370 DSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 370 ~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
...+ .++|.+++||+++++.++++|++.++.++++.||+||
T Consensus 237 -~~~l--------~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE 277 (471)
T PRK07787 237 -ARAL--------RGARLLVSGSAALPVPVFDRLAALTGHRPVERYGMTE 277 (471)
T ss_pred -cccc--------cceeEEEECCCCCCHHHHHHHHHHcCCCeecccCccc
Confidence 0012 3899999999999999999999989999999999998
No 110
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-32 Score=270.67 Aligned_cols=239 Identities=17% Similarity=0.186 Sum_probs=208.6
Q ss_pred eEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEE
Q 014742 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV 155 (419)
Q Consensus 76 ~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 155 (419)
+.+||.||.++++++|+.|. .|+++|++|+++++|+++++++++|++++|++++|+++..+.+++..+++.++++++++
T Consensus 7 ~~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~ 85 (414)
T PRK08308 7 EEYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAGCHGLLY 85 (414)
T ss_pred ceecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCCCCEEEe
Confidence 58999999999999999985 68999999999999999999999999999999999999999999999999999999998
Q ss_pred eCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCC
Q 014742 156 QENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEP 235 (419)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~P 235 (419)
++.... ... .....++++++++|||||||.|
T Consensus 86 ~~~~~~------------------~~~-------------------------------~~~~~~~~~~~i~~TSGtTG~P 116 (414)
T PRK08308 86 GESDFT------------------KLE-------------------------------AVNYLAEEPSLLQYSSGTTGEP 116 (414)
T ss_pred cCcccc------------------ccc-------------------------------CCCCCCCCceEEEECCCCCCCC
Confidence 763110 000 0012467889999999999999
Q ss_pred CeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHH-HHHHHhcCceEEEeCC-CHHHHHHHhhhhcC
Q 014742 236 KGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKP 313 (419)
Q Consensus 236 K~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~-~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~ 313 (419)
|+|++||+++..++..+...+ ....+|+++..+|++|.+|+.. ++.++..|+++++.+. ++..+++.++++++
T Consensus 117 Kgv~~s~~~l~~~~~~~~~~~-----~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~ 191 (414)
T PRK08308 117 KLIRRSWTEIDREIEAYNEAL-----NCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNILRNTPQ 191 (414)
T ss_pred cEEEEehHhHHHHHHHHHHhh-----CCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHhCC
Confidence 999999999999888876666 7778899999999999999876 7889999999999877 99999999999999
Q ss_pred eEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccC
Q 014742 314 TMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAA 393 (419)
Q Consensus 314 t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~ 393 (419)
|+++++|.++..+.+.. + .+ .+++.++++|+
T Consensus 192 t~~~~~P~~~~~l~~~~------------------------------------~-~~------------~~l~~~~~~G~ 222 (414)
T PRK08308 192 HILYAVPLMLHILGRLL------------------------------------P-GT------------FQFHAVMTSGT 222 (414)
T ss_pred eEEEcCHHHHHHHHhcC------------------------------------C-cc------------ccccEEEEccC
Confidence 99999999999886410 0 00 26788999999
Q ss_pred CCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 394 PLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 394 ~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
++++++.+++++. +.++++.||+||
T Consensus 223 ~l~~~~~~~~~~~-~~~~~~~YG~tE 247 (414)
T PRK08308 223 PLPEAWFYKLRER-TTYMMQQYGCSE 247 (414)
T ss_pred CCCHHHHHHHHHh-CChhhhccCccc
Confidence 9999999999986 678999999998
No 111
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.7e-33 Score=278.45 Aligned_cols=286 Identities=20% Similarity=0.254 Sum_probs=223.2
Q ss_pred eEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEE
Q 014742 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV 155 (419)
Q Consensus 76 ~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 155 (419)
+.+||.||.+.+++++++|++.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++.++++++++
T Consensus 10 ~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~ 89 (502)
T PRK08276 10 EVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIV 89 (502)
T ss_pred cEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEE
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCC
Q 014742 156 QENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEP 235 (419)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~P 235 (419)
+......+.+........+..+++.+... .....|++...... .......++.++++|||||||.|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~---~~~~~~~~~~a~i~~TSGtTG~P 155 (502)
T PRK08276 90 SAALADTAAELAAELPAGVPLLLVVAGPV-----------PGFRSYEEALAAQP---DTPIADETAGADMLYSSGTTGRP 155 (502)
T ss_pred ccchhhHHHHHhhhccccccEEEEeCCCC-----------CccccHHHHHhcCC---CCCCCCCCcceEEEECCCCCCCC
Confidence 98776655443322211344555443211 11334554443221 11223456789999999999999
Q ss_pred CeEEeechhHHHHhh--hhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC-CHHHHHHHhhhhc
Q 014742 236 KGVVLTNQAIVAEVL--SVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELK 312 (419)
Q Consensus 236 K~V~~sh~~l~~~~~--~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~ 312 (419)
|+|.++|.++..... ...... ........++++++.+|++|.+++...+.++..|+++++.+. ++..+++.+++++
T Consensus 156 K~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~ 234 (502)
T PRK08276 156 KGIKRPLPGLDPDEAPGMMLALL-GFGMYGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVMEKFDAEEALALIERYR 234 (502)
T ss_pred ceEEEccCCcchhhhhHHhhhhh-hhcccCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcCCCCHHHHHHHHHHhC
Confidence 999999887654332 111111 011123467899999999999998887789999999999876 9999999999999
Q ss_pred CeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEcc
Q 014742 313 PTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGA 392 (419)
Q Consensus 313 ~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G 392 (419)
+|++.++|.++..+++... ...+.++++ ++|.+++||
T Consensus 235 ~t~~~~~P~~~~~l~~~~~-----------------------------------~~~~~~~~~--------~lr~i~~~g 271 (502)
T PRK08276 235 VTHSQLVPTMFVRMLKLPE-----------------------------------EVRARYDVS--------SLRVAIHAA 271 (502)
T ss_pred CeEEEehHHHHHHHHhCcc-----------------------------------ccCCCCCcc--------cceEEEecC
Confidence 9999999999998865200 001112232 899999999
Q ss_pred CCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 393 APLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 393 ~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
+++++++.+++.+.+|..+++.||+||
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~yG~tE 298 (502)
T PRK08276 272 APCPVEVKRAMIDWWGPIIHEYYASSE 298 (502)
T ss_pred CCCCHHHHHHHHHHhCcHhhhhccccc
Confidence 999999999999988999999999998
No 112
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.8e-32 Score=294.56 Aligned_cols=306 Identities=14% Similarity=0.149 Sum_probs=226.8
Q ss_pred CCCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHH
Q 014742 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (419)
Q Consensus 40 ~~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~ 119 (419)
....++.++|...++.+||++|+++. + +.+||.||.++++++|++|++.|+++||+|+++++|++++++++
T Consensus 444 ~~~~sl~~ll~~~a~~~pd~~Al~~~----~-----~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~ 514 (994)
T PRK07868 444 HTRISLGRIIAEQARDAPKGEFLLFD----G-----RVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAI 514 (994)
T ss_pred CCCccHHHHHHHHHHHCCCCeEEEeC----C-----ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHH
Confidence 34568999999999999999999864 3 47999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceee
Q 014742 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (419)
Q Consensus 120 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (419)
+||+++|++++|+++. .++.++++.+++++||++......+... ...+++++.......... ......
T Consensus 515 lA~~~aGav~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~~-------~~~iiv~~~~~~~~~~~~--~~~~~~ 582 (994)
T PRK07868 515 AALSRLGAVAVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQL-------PGRVLVLGGGESRDLDLP--DDADVI 582 (994)
T ss_pred HHHHhcCCEEEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHhc-------CceEEEecCCccccccCC--cchhhh
Confidence 9999999999999984 6899999999999999987766554321 134455442110000000 000011
Q ss_pred eHHHHHhcCCC---CCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChH
Q 014742 200 SWEEFLQLGTL---DCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLA 276 (419)
Q Consensus 200 ~~~~~~~~~~~---~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~ 276 (419)
.++++...... ........++++++|+|| ||||.||++.++|.+...........+ ++..+|++++.+|++
T Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~-----~l~~~d~~L~~~Pl~ 656 (994)
T PRK07868 583 DMEKIDPDAVELPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAA-----ALDRRDTVYCLTPLH 656 (994)
T ss_pred hhhhcCcccccCCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhc-----CCCCCCeEEEecChH
Confidence 11111110000 001112236889999998 688888888888877665544433333 778899999999999
Q ss_pred HHHHHHHHH-HHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhh
Q 014742 277 HIYDQIIET-HCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLG 354 (419)
Q Consensus 277 h~~g~~~~l-~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (419)
|.+++...+ ..+..|+++++.+. +++.+++.|+++++|+++++|++++.|++.
T Consensus 657 h~~gl~~~l~~~l~gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~------------------------- 711 (994)
T PRK07868 657 HESGLLVSLGGAVVGGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDD------------------------- 711 (994)
T ss_pred HHhHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhC-------------------------
Confidence 999998744 55666666767665 999999999999999999999999988651
Q ss_pred hhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhC-CceeeeccCCC
Q 014742 355 NMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG-APLTQGYGMVE 419 (419)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~-~~v~~~YG~tE 419 (419)
+.....++ +++|.++ |+.+++++++++.+.++ .++++.||+||
T Consensus 712 ------------~~~~~~~~--------~slr~~~--g~gl~~~l~~~~~~~~~~~~l~~~YG~TE 755 (994)
T PRK07868 712 ------------PAFVLHGN--------HPVRLFI--GSGMPTGLWERVVEAFAPAHVVEFFATTD 755 (994)
T ss_pred ------------cCCccCCC--------CceEEEe--cCCCCHHHHHHHHHHhCchheeeeeeccc
Confidence 00000011 3789776 34599999999999986 88999999998
No 113
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.3e-32 Score=278.20 Aligned_cols=297 Identities=20% Similarity=0.217 Sum_probs=230.7
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHH
Q 014742 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (419)
Q Consensus 43 ~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~ 122 (419)
.++.+.|..++...|+.+++... ++. +.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~ 74 (545)
T PRK07768 2 SRFTEKMYANARTSPRGMVTGEP---DAP----VRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGL 74 (545)
T ss_pred chHHHHHHHHhhCCCcceEEecC---CCc----eEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHH
Confidence 46888889999999999988754 432 67999999999999999999999999999999999999999999999
Q ss_pred HHcCCeEEeeccCCChhHH-------HHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhC
Q 014742 123 NSQAITYVPLYDTLGANAV-------EFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELG 195 (419)
Q Consensus 123 ~~~G~~~vpl~~~~~~~~l-------~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (419)
+++|++++|+++..+.+++ ..+++.++++.+++++........ .... .
T Consensus 75 ~~~g~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~------------------------~ 129 (545)
T PRK07768 75 WMRGASLTMLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPV-LEEK------------------------G 129 (545)
T ss_pred HHcCccccccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhh-hccc------------------------C
Confidence 9999999999998876554 456777899999998754432211 1100 0
Q ss_pred ceeeeHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCC-cEEEEecC
Q 014742 196 VSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEE-DTYFSFLP 274 (419)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~-d~~l~~~p 274 (419)
.....++++..... .......++++++++|||||||.||+|+++|++++..+......+ ++..+ |++++.+|
T Consensus 130 ~~~~~~~~l~~~~~--~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~~d~~~~~~p 202 (545)
T PRK07768 130 IRVLTVADLLAADP--IDPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAA-----EFDVETDVMVSWLP 202 (545)
T ss_pred CceeehhhhcccCC--CCcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhc-----CCCCCCceeEEeCC
Confidence 01233444443221 122344578999999999999999999999999998887765555 66665 89999999
Q ss_pred hHHHHHHHH-HHHHHhcCceEEEeCC-----CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHH
Q 014742 275 LAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFA 348 (419)
Q Consensus 275 l~h~~g~~~-~l~~l~~G~~ivl~~~-----~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 348 (419)
++|.+++.. ++.++..|+++++.+. ++..+++.+++++++++...|.++..+.+.++....
T Consensus 203 ~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~------------- 269 (545)
T PRK07768 203 LFHDMGMVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAK------------- 269 (545)
T ss_pred CccchHHHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhcccc-------------
Confidence 999999986 6678999999988753 678889999999999988878777666543211100
Q ss_pred HHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHh---hCC---ceeeeccCCC
Q 014742 349 YNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVT---SGA---PLTQGYGMVE 419 (419)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~---~~~---~v~~~YG~tE 419 (419)
. ...++ .++|.++++|+++++.+.+++.+. +|. .+++.||+||
T Consensus 270 -----------------~---~~~~~--------~~lr~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~yG~tE 318 (545)
T PRK07768 270 -----------------P---GAFDL--------SSLRFALNGAEPIDPADVEDLLDAGARFGLRPEAILPAYGMAE 318 (545)
T ss_pred -----------------c---cCCCc--------hheeeEEeccCCCCHHHHHHHHHHHHhcCCCcccccccccccc
Confidence 0 01112 289999999999999999999874 555 4999999998
No 114
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=2.4e-32 Score=267.78 Aligned_cols=264 Identities=22% Similarity=0.306 Sum_probs=219.3
Q ss_pred eHHHHHHHHHHHHHHHHh-CCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeC
Q 014742 79 TYQEVYDAAIRFGSAMRS-RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 157 (419)
Q Consensus 79 Ty~el~~~~~~la~~L~~-~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~ 157 (419)
||.||.+.+++++++|.+ .|+++||+|+++++|+++++++++||+++|++++|+++..+.+++.++++.+++++++++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 799999999999999998 8999999999999999999999999999999999999999999999999999999999998
Q ss_pred CChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeHHHHHhcC-CCCCCCCCCCCCceEEEEeCCCCCCCCC
Q 014742 158 NKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPK 236 (419)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK 236 (419)
.....+..... ..+.+... +....... ...........+++++++|||||||.||
T Consensus 81 ~~~~~~~~~~~-------~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTtG~pK 136 (408)
T TIGR01733 81 ALASRLAGLVL-------PIILVDPL-----------------ELAALDDAPAPPPPDAPSGPDDLAYVIYTSGSTGRPK 136 (408)
T ss_pred chhhhccccCC-------ceEEechh-----------------hhhhcccccccccccCCCCCCCcEEEEEcCCCCCCCC
Confidence 76654422211 11222111 00000111 0011111135789999999999999999
Q ss_pred eEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC----CHHHHHHHhhhhc
Q 014742 237 GVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELK 312 (419)
Q Consensus 237 ~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~----~~~~~~~~i~~~~ 312 (419)
+|.+||+++...+..+...+ .+..+|++++..|++|.+++..++.++..|+++++.+. ++..+.+.+++++
T Consensus 137 ~v~~s~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (408)
T TIGR01733 137 GVVVTHRSLVNLLAWLARRY-----GLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHP 211 (408)
T ss_pred EEEeccHHHHHHHHHHHHhc-----CCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcC
Confidence 99999999999988877766 78889999999999999998889999999999999876 2688999999999
Q ss_pred CeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEcc
Q 014742 313 PTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGA 392 (419)
Q Consensus 313 ~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G 392 (419)
+|.+.++|.+++.+.+... ..+ +++|.+++||
T Consensus 212 ~t~l~~~p~~~~~l~~~~~----------------------------------------~~~--------~~l~~v~~~g 243 (408)
T TIGR01733 212 VTVLNLTPSLLALLAAALP----------------------------------------PAL--------ASLRLVILGG 243 (408)
T ss_pred ceEEEeCHHHHHHHHHhhh----------------------------------------hcc--------cCceEEEEeC
Confidence 9999999999999876211 112 3899999999
Q ss_pred CCCCHHHHHHHHHhhC-CceeeeccCCC
Q 014742 393 APLPIHVEEFLRVTSG-APLTQGYGMVE 419 (419)
Q Consensus 393 ~~l~~~~~~~~~~~~~-~~v~~~YG~tE 419 (419)
+++++++.+++++.++ +.+++.||+||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~i~~~YG~tE 271 (408)
T TIGR01733 244 EALTPALVDRWRARGPGARLINLYGPTE 271 (408)
T ss_pred ccCCHHHHHHHHHhCCCcEEEecccCCc
Confidence 9999999999999997 89999999998
No 115
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=1e-32 Score=273.71 Aligned_cols=244 Identities=16% Similarity=0.119 Sum_probs=200.1
Q ss_pred eeHHHHHHHHHHHHHHHHhCCC-CCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEe
Q 014742 78 LTYQEVYDAAIRFGSAMRSRGV-NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQ 156 (419)
Q Consensus 78 ~Ty~el~~~~~~la~~L~~~g~-~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~ 156 (419)
+.|.||.++++++|++|++.|+ ++|++|+++++|+++++++++||+++|++++|+++.++.+++.++++.+++++++++
T Consensus 20 ~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~~ 99 (452)
T PRK07445 20 YNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWGL 99 (452)
T ss_pred cChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEec
Confidence 7899999999999999999988 579999999999999999999999999999999999999999999999999999987
Q ss_pred CCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCC
Q 014742 157 ENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPK 236 (419)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK 236 (419)
....... .... . .......++++++++|||||||.||
T Consensus 100 ~~~~~~~----------------~~~~------------------------~---~~~~~~~~~~~~~i~~TSGTTG~PK 136 (452)
T PRK07445 100 DQLKLSH----------------PPPL------------------------P---SQGILPNLETGWIMIPTGGSSGQIR 136 (452)
T ss_pred Ccccccc----------------CCCC------------------------C---ccccCCCCCCcEEEEeCCCCCCCCc
Confidence 6532110 0000 0 0001134688999999999999999
Q ss_pred eEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeE
Q 014742 237 GVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTM 315 (419)
Q Consensus 237 ~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~ 315 (419)
||++||+++...+......+ ++.+ ++.++.+|++|.+|+..++.++..|+++++.+. +.........++++++
T Consensus 137 gV~~t~~~l~~~~~~~~~~~-----~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~~t~ 210 (452)
T PRK07445 137 FAIHTWETLTASVQGFQRYF-----QLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYKRLKSGQELPPNPSDFF 210 (452)
T ss_pred EEEechHHHHHHHHHHHHHh-----cCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChHhccchhhhhhhcCceE
Confidence 99999999998887766655 4543 467889999999999888889999999999874 3333334445789999
Q ss_pred EEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCC
Q 014742 316 FSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPL 395 (419)
Q Consensus 316 l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l 395 (419)
++++|++++.+++. . ...+ +++|.+++||+++
T Consensus 211 ~~~vP~~l~~l~~~------------------------------------~----~~~l--------~~l~~i~~gG~~l 242 (452)
T PRK07445 211 LSLVPTQLQRLLQL------------------------------------R----PQWL--------AQFRTILLGGAPA 242 (452)
T ss_pred EEehHHHHHHHHhh------------------------------------C----hhhh--------hcceEEEECCccC
Confidence 99999999998641 0 0112 2899999999999
Q ss_pred CHHHHHHHHHhhCCceeeeccCCC
Q 014742 396 PIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 396 ~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
++++.+.++. +++++++.||+||
T Consensus 243 ~~~~~~~~~~-~~~~l~~~YG~TE 265 (452)
T PRK07445 243 WPSLLEQARQ-LQLRLAPTYGMTE 265 (452)
T ss_pred CHHHHHHHHh-cCCeEecCcchhh
Confidence 9999999887 4999999999998
No 116
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=3.1e-32 Score=269.50 Aligned_cols=253 Identities=24% Similarity=0.312 Sum_probs=211.6
Q ss_pred eHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCC
Q 014742 79 TYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (419)
Q Consensus 79 Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (419)
||.||.+.++++|+.|.+.|+++||+|+++++|+++++++++||+++|++++|+++.++.+++..+++.++++++++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred ChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeHHHHHhcC-CCCCCCCCCCCCceEEEEeCCCCCCCCCe
Q 014742 159 KIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKG 237 (419)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~ 237 (419)
...... . ...+..+.... ...........+++++++|||||||.||+
T Consensus 81 ~~~~~~--------------~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~ 128 (436)
T TIGR01923 81 LEEKDF--------------Q------------------ADSLDRIEAAGRYETSLSASFNMDQIATLMFTSGTTGKPKA 128 (436)
T ss_pred ccccce--------------e------------------ecchHhhhhcccccccccccCCcCceEEEEeCCCCCCCCcE
Confidence 321100 0 00011111111 11111223456889999999999999999
Q ss_pred EEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCCCHHHHHHHhhhhcCeEEE
Q 014742 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFS 317 (419)
Q Consensus 238 V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~~~~~~~~~i~~~~~t~l~ 317 (419)
|.++|+++...+......+ +..++|++++.+|++|.+++..++.++..|+++++.+.. ..+++.++++++|++.
T Consensus 129 v~~s~~~~~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~-~~~~~~l~~~~~t~~~ 202 (436)
T TIGR01923 129 VPHTFRNHYASAVGSKENL-----GFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF-NQLLEMIANERVTHIS 202 (436)
T ss_pred EEEehHHHHHHHHHHHhhc-----CCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH-HHHHHHHHHhCCeEEE
Confidence 9999999999888877666 788899999999999999998788999999999998642 4899999999999999
Q ss_pred ecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCH
Q 014742 318 GVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPI 397 (419)
Q Consensus 318 ~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~ 397 (419)
++|.++..+.+. .... .++|.+++||+++++
T Consensus 203 ~~P~~l~~l~~~-------------------------------------~~~~------------~~l~~~~~~G~~~~~ 233 (436)
T TIGR01923 203 LVPTQLNRLLDE-------------------------------------GGHN------------ENLRKILLGGSAIPA 233 (436)
T ss_pred eHHHHHHHHHhC-------------------------------------cCCC------------CceEEEEECCCCCCH
Confidence 999999988651 0000 289999999999999
Q ss_pred HHHHHHHHhhCCceeeeccCCC
Q 014742 398 HVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 398 ~~~~~~~~~~~~~v~~~YG~tE 419 (419)
++.++++. +|+++++.||+||
T Consensus 234 ~~~~~~~~-~~~~~~~~YG~tE 254 (436)
T TIGR01923 234 PLIEEAQQ-YGLPIYLSYGMTE 254 (436)
T ss_pred HHHHHHHH-hCCceeeEecCCc
Confidence 99999887 5999999999998
No 117
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.3e-31 Score=270.45 Aligned_cols=289 Identities=19% Similarity=0.214 Sum_probs=220.6
Q ss_pred eEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEE
Q 014742 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV 155 (419)
Q Consensus 76 ~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 155 (419)
+.+||.||.+++++++++|.+.|+++|++|+++++|+++++++++||+++|++++|+++..+.+++..+++.++++++++
T Consensus 10 ~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~ 89 (509)
T PRK12406 10 RRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIA 89 (509)
T ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEE
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCChhhHhhcCccCCCCccEEEEecCCChhh-HH----HHHHhCceeeeHHHHHhcCCCCCCCCCCCCCceEEEEeCCC
Q 014742 156 QENKIPSILSCLPRCCLYLKTIVSFANVSSSQ-KK----EAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSG 230 (419)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSG 230 (419)
+......+.+.... . ..++......... .. ...........|+++..... .......+++++++||||
T Consensus 90 ~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~a~i~~TSG 162 (509)
T PRK12406 90 HADLLHGLASALPA---G-VTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQE---PYDGPPVPQPQSMIYTSG 162 (509)
T ss_pred ccchhhhhhhhhhc---c-cceeecccccccccccccccccccCCCCccCHHHHhcccC---ccCCCCCCCceEEEECCC
Confidence 98766654332211 1 1111111100000 00 00000112344555543221 122335689999999999
Q ss_pred CCCCCCeEEeechhHH---HHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC-CHHHHHH
Q 014742 231 TTGEPKGVVLTNQAIV---AEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLME 306 (419)
Q Consensus 231 tTG~PK~V~~sh~~l~---~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~-~~~~~~~ 306 (419)
|||.||+|.++|.+.. .........+ ++..++++++.+|++|..+....+.++..|+++++.+. ++..+++
T Consensus 163 tTG~PK~v~~s~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 237 (509)
T PRK12406 163 TTGHPKGVRRAAPTPEQAAAAEQMRALIY-----GLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQPRFDPEELLQ 237 (509)
T ss_pred CCCCCceEEEechhHHHHHHHHHhhhhhc-----CCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEccCCCHHHHHH
Confidence 9999999999776543 3333333333 67888999999999999888777778889999998876 9999999
Q ss_pred HhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEe
Q 014742 307 DIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQ 386 (419)
Q Consensus 307 ~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr 386 (419)
.++++++|.+.++|.++..+++.... ..+..++ .++|
T Consensus 238 ~l~~~~~t~~~~~P~~~~~l~~~~~~-----------------------------------~~~~~~~--------~~l~ 274 (509)
T PRK12406 238 LIERHRITHMHMVPTMFIRLLKLPEE-----------------------------------VRAKYDV--------SSLR 274 (509)
T ss_pred HHHHcCCeEEEccHHHHHHHHhCchh-----------------------------------hcccCCC--------Ccee
Confidence 99999999999999999988642100 0011112 3899
Q ss_pred EEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 387 AMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 387 ~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
.+++||+++++++.+++.+.++..+++.||+||
T Consensus 275 ~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE 307 (509)
T PRK12406 275 HVIHAAAPCPADVKRAMIEWWGPVIYEYYGSTE 307 (509)
T ss_pred EEEEcCCCCCHHHHHHHHHHcCCcEEeeccccc
Confidence 999999999999999999988999999999998
No 118
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.9e-31 Score=262.24 Aligned_cols=317 Identities=19% Similarity=0.233 Sum_probs=247.1
Q ss_pred CCCCCHHHHH-HHHHHh-CCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHH
Q 014742 40 AGLESPWQFF-CDSAKR-IPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWII 117 (419)
Q Consensus 40 ~~~~tl~~~l-~~~a~~-~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~ 117 (419)
....++.+.+ +++.+. .++.++++++ +.+.++...+||.++.+.+.++|..|+.+|+++||+|++.+|+.++.++
T Consensus 60 g~~ln~~~n~~~~~~~~~~~~~~a~~~~---~~~~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~i 136 (626)
T KOG1175|consen 60 GAFLNACYNCLDRHIKEKGGDKVAIIFE---GNEGGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVI 136 (626)
T ss_pred cchhhhhHhhhhhhhhhcCCCCcEEEEE---ecCCCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHH
Confidence 3445555543 444333 4889999887 4455555569999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhH------------hhcCccCCCCccEEEEecCCCh
Q 014742 118 AMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSI------------LSCLPRCCLYLKTIVSFANVSS 185 (419)
Q Consensus 118 ~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~ 185 (419)
+++||.++|++..++-..++++++...++.+++++||+.+...... +.............+.+.....
T Consensus 137 a~lA~~r~Gai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 216 (626)
T KOG1175|consen 137 AMLACARIGAIHSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRNR 216 (626)
T ss_pred HHHHHhhcCeEEEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEecccc
Confidence 9999999999999999999999999999999999999987432211 1111111011111112211111
Q ss_pred hhHHHHHHhCceeeeHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHH-HHhhhhhhhhhhcCccCC
Q 014742 186 SQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIV-AEVLSVDQMFVVTGKVCS 264 (419)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~-~~~~~~~~~~~~~~~~~~ 264 (419)
...|+++........+....+.+|+.+|+|||||||.||++.+++.... ..+......+ +++
T Consensus 217 ------------d~~~~~~~~~a~~~~~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~-----d~q 279 (626)
T KOG1175|consen 217 ------------DLFWSLELKKASPEHPCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHF-----DLQ 279 (626)
T ss_pred ------------cccHHHHhhhcCCCCCceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceec-----cCC
Confidence 2356666565545555777889999999999999999999999998754 4444444455 899
Q ss_pred CCcEEEEecChHHHHHHHH-HHHHHhcCceEEEeCC---CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCch
Q 014742 265 EEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG---DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGAL 340 (419)
Q Consensus 265 ~~d~~l~~~pl~h~~g~~~-~l~~l~~G~~ivl~~~---~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~ 340 (419)
+.|++.++..+.++.+.+. .+.+|+.|+++++.+. ++..+++.+.++++|.+++.|+.++.+.....
T Consensus 280 ~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~--------- 350 (626)
T KOG1175|consen 280 PSDVLWCASDLGWITGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQ--------- 350 (626)
T ss_pred CcceEEEecccCeeeccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhcc---------
Confidence 9999999999999999998 6679999999999876 89999999999999999999999998755311
Q ss_pred HHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCC-ceeeeccCCC
Q 014742 341 SKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGA-PLTQGYGMVE 419 (419)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~-~v~~~YG~tE 419 (419)
.......++ +||.+.++|+++.++..+++.+.+|. +|++.||+||
T Consensus 351 --------------------------~~~~~~~~~--------sLk~~~S~Gepi~~~~~ew~~~~~~~~pv~e~~~qtE 396 (626)
T KOG1175|consen 351 --------------------------EDVTSYSLK--------SLRTCGSVGEPINPEAWEWWKRVTGLDPIYETYGQTE 396 (626)
T ss_pred --------------------------ccccccccc--------eEEEEeecCccCCcchHHHHHHhcCccchhhceeeec
Confidence 111222122 79999999999999999999999988 6999999998
No 119
>PLN03051 acyl-activating enzyme; Provisional
Probab=99.97 E-value=4.9e-30 Score=258.08 Aligned_cols=257 Identities=18% Similarity=0.156 Sum_probs=186.3
Q ss_pred cCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCCh------hhHhhcCccCCCCccEEEEecC
Q 014742 109 GSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI------PSILSCLPRCCLYLKTIVSFAN 182 (419)
Q Consensus 109 ~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 182 (419)
++|+++++++++||+++|++++|+++.++.+++.++++.++++++|+++... +.+.+... . .....++....
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~-~-~~~~~i~~~~~ 78 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVE-A-APAKAIVLPAA 78 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhh-c-ccceEEEEecc
Confidence 5899999999999999999999999999999999999999999999986421 11111111 1 11122222211
Q ss_pred CChhhHHHHHHhCceeeeHHHHHhcCC-------CCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhh
Q 014742 183 VSSSQKKEAEELGVSCFSWEEFLQLGT-------LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQM 255 (419)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~ 255 (419)
..... . .......+|+++..... .........++++++|+|||||||.||||++||++++..+......
T Consensus 79 ~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~ 154 (499)
T PLN03051 79 GEPVA-V---PLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAH 154 (499)
T ss_pred CcccC-C---ccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHh
Confidence 10000 0 00001234555542110 0111112346899999999999999999999999988766554443
Q ss_pred hhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHH
Q 014742 256 FVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNK 333 (419)
Q Consensus 256 ~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~ 333 (419)
+ +++.+|++++.+|++|.+++..++.++..|+++++.+. ++..+++.|+++++|++.++|+++..|++..
T Consensus 155 ~-----~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~--- 226 (499)
T PLN03051 155 M-----DIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTG--- 226 (499)
T ss_pred c-----CCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcC---
Confidence 4 67788999999999999998767888999999999864 7899999999999999999999999886410
Q ss_pred hhccCchHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhh--CCce
Q 014742 334 ISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS--GAPL 411 (419)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~--~~~v 411 (419)
.......+++ +||.+++||+++++++.+++++.+ +.++
T Consensus 227 --------------------------------~~~~~~~~~~--------~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~ 266 (499)
T PLN03051 227 --------------------------------AFAMEGLDWS--------KLRVFASTGEASAVDDVLWLSSVRGYYKPV 266 (499)
T ss_pred --------------------------------ccccccCCch--------hheEEEecCCCCCHHHHHHHHHhcccccee
Confidence 0001112233 899999999999999998888743 4789
Q ss_pred eeeccCCC
Q 014742 412 TQGYGMVE 419 (419)
Q Consensus 412 ~~~YG~tE 419 (419)
++.||+||
T Consensus 267 ~~~YG~TE 274 (499)
T PLN03051 267 IEYCGGTE 274 (499)
T ss_pred Eeeecccc
Confidence 99999998
No 120
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.95 E-value=1e-26 Score=208.31 Aligned_cols=222 Identities=13% Similarity=0.069 Sum_probs=164.6
Q ss_pred HHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHh-CCCCCCCeEEEEcCCchhHHHHHHHHHHcCC
Q 014742 49 FCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRS-RGVNPGDRCGIYGSNCPEWIIAMEACNSQAI 127 (419)
Q Consensus 49 l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~-~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~ 127 (419)
|...++.+|+++++++. ++..++.+.+||.|+.++++++|+.|++ .|+++||+|+++++|+++++++++||+++|+
T Consensus 2 ~~~~~~~~p~~~al~~~---~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~ 78 (227)
T TIGR03089 2 LSPLLAADPASPRLTFY---DDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGV 78 (227)
T ss_pred hhhhhhhCCCCcEEEEE---cCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC
Confidence 56788899999999854 3222223579999999999999999998 7999999999999999999999999999999
Q ss_pred eEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeHHHHHhc
Q 014742 128 TYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQL 207 (419)
Q Consensus 128 ~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (419)
+++|+| .+++++++++.+....+. . . +.++.+........ .......+..+|.+....
T Consensus 79 v~vp~n-------------~s~a~~~v~~~~~~~~~~-~-----~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 136 (227)
T TIGR03089 79 EVVLAG-------------DPDADVVVTGPDRLAAAA-G-----S--GEVVALSLDPLGRR-VAGELPPGVIDFAPEVRV 136 (227)
T ss_pred EEEeCC-------------CCCCCEEEeCcchhhhcc-c-----C--CceEEEeccccccC-CCCCCCCcccchhhhhhc
Confidence 999995 678999999987766532 1 1 22233211000000 000001122356665553
Q ss_pred CCCCCCCC-CCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHH-HH
Q 014742 208 GTLDCELP-PKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ET 285 (419)
Q Consensus 208 ~~~~~~~~-~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~-~l 285 (419)
........ ...++|+++++||||+ +|.+++.+. ... +++++|+++ .+|++|.+|+.. ++
T Consensus 137 ~~~~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~-----~l~~~D~~l-~~Pl~H~~gl~~~~~ 197 (227)
T TIGR03089 137 HGDQFAPYEPPDATAPALVAGGGEW---------TGAELVAAA----RAA-----GLPPGDRVL-VLAWTDLEDFLATLL 197 (227)
T ss_pred cCCCCCCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhc-----CCCCCCeEE-ecCCCchHHHHHHHH
Confidence 31222212 4466899999999985 666666554 222 788899999 999999999976 88
Q ss_pred HHHhcCceEEEeCC-CHHHHHHHhhhhcCe
Q 014742 286 HCIHKGCSIGFWRG-DVRYLMEDIQELKPT 314 (419)
Q Consensus 286 ~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t 314 (419)
.+|..|+++++.+. ++..+++.|+++|||
T Consensus 198 ~~l~~G~t~v~~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 198 APLAAGGSLVLVTHPDPARLDQIAETERVT 227 (227)
T ss_pred HHhccCceEEEecCCCHHHHHHHHHhhcCC
Confidence 99999999999977 999999999999987
No 121
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.93 E-value=4.1e-24 Score=221.78 Aligned_cols=292 Identities=22% Similarity=0.258 Sum_probs=233.8
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHH
Q 014742 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (419)
Q Consensus 42 ~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA 121 (419)
..++.+.+...+...|+..++.+. + ..+||.++..+++++|+.|++.|+.+++.|+++++.+.++++.++|
T Consensus 226 ~~~i~~~f~~~a~~~p~~~a~~~~---~------~~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~~i~~~l~ 296 (642)
T COG1020 226 RLTIHLLFEEQAATTPDAVALVRG---G------QQLTYAELDARANRLARLLISLGVGPGETVAILADRSLELVVALLA 296 (642)
T ss_pred cchHHHHHHHHHHhCCCceeEecC---C------CcccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHHHHHHHHH
Confidence 478999999999999999998863 2 4799999999999999999999999999999999889999999999
Q ss_pred HHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCceeeeH
Q 014742 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (419)
Q Consensus 122 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (419)
++++|+.++|+++..+.+.+..+++.++++.+++........... +. +..+... +
T Consensus 297 ilkaG~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~----~~~~~~~----------------~ 351 (642)
T COG1020 297 VLKAGAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVGL-----PG----LALDDAL----------------S 351 (642)
T ss_pred HHhcCCeEecCCCCChHHHHHHHHhhcCccEEEeccccccccccC-----Cc----ccccccc----------------c
Confidence 999999999999999999999999999999999984322211000 00 1111110 0
Q ss_pred HHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHH
Q 014742 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (419)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~ 281 (419)
. ............+++.++++|||||||.||||..+|+++.+........+ ..+.+|+++...++.+....
T Consensus 352 ~----~~~~~~~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~-----~~~~~d~~l~~~s~~fD~~~ 422 (642)
T COG1020 352 E----IPDTDPIPQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARF-----GLDADDRVLALASLSFDASV 422 (642)
T ss_pred c----CCccCcccccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhc-----CCCcccEEeecCCcccchhH
Confidence 0 00001112233458999999999999999999999999999777766655 88889999999999777777
Q ss_pred HHHHHHHhcCceEEEeCC----CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhc
Q 014742 282 IIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (419)
Q Consensus 282 ~~~l~~l~~G~~ivl~~~----~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (419)
..++.++..|+++++.+. ++..+.+.+.++++|.+..+|.++..+.....
T Consensus 423 ~~~f~~l~~G~~l~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~-------------------------- 476 (642)
T COG1020 423 FEIFGALLEGARLVLAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAAL-------------------------- 476 (642)
T ss_pred HHHHHHHhCCCEEEecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchh--------------------------
Confidence 779999999999999875 89999999999999999999999998865200
Q ss_pred cCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhh--CCceeeeccCCC
Q 014742 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS--GAPLTQGYGMVE 419 (419)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~--~~~v~~~YG~tE 419 (419)
.... .. ....+|.+.+||+.++..+...+.... ...+.+.||.||
T Consensus 477 ----------~~~~--~~-----~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~~ygpTe 523 (642)
T COG1020 477 ----------APDL--IS-----PCERLRQLLSGGEALPLALVQRLLQLAALARRLLNLYGPTE 523 (642)
T ss_pred ----------hccc--cC-----CcccccEEEEcCCCCCHHHHHHHHHhccccceEeeccCccH
Confidence 0000 00 002489999999999999999888865 368999999998
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.81 E-value=3.1e-19 Score=172.48 Aligned_cols=155 Identities=18% Similarity=0.251 Sum_probs=122.7
Q ss_pred eeeHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCC--CCcEEEEecCh
Q 014742 198 CFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCS--EEDTYFSFLPL 275 (419)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~--~~d~~l~~~pl 275 (419)
+..|.+++... ..+..++++|||||||.||+|.+||+++...+..+...+ +.. ..|++++.+|+
T Consensus 82 ~~~~~~~~~~~---------~~~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~~~dr~l~~~Pl 147 (386)
T TIGR02372 82 IGEWVDLIAHH---------STPTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKIL-----GERPPPVRRVISCVPA 147 (386)
T ss_pred HHHHHHHHHhc---------CCCCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHh-----CcCCCCCCeEEEeCCc
Confidence 44566666543 224578999999999999999999999998888766655 443 34689999999
Q ss_pred HHHHHHHH-HHHHHhcCceEEEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhh
Q 014742 276 AHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKL 353 (419)
Q Consensus 276 ~h~~g~~~-~l~~l~~G~~ivl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (419)
+|.+|+.+ ++.++..|+++++.+. ++..+++.++.+ |++.++|.+++.+.+.
T Consensus 148 ~h~~g~~~~~l~~l~~G~~vv~~~~~~~~~~l~~i~~~--t~~~~~P~~l~~l~~~------------------------ 201 (386)
T TIGR02372 148 HHLYGFLFSCLLPSRRGLEAKQLAAAPASGIMRHARPG--DLIVGTPFIWEQLADL------------------------ 201 (386)
T ss_pred HHHHHHHHHHHHHHHCCCeEEecCCCChHHHHHhhccC--CEEEECcHHHHHHHhh------------------------
Confidence 99999865 7788999999998866 888888888754 8999999999988541
Q ss_pred hhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCC-ceeeeccCCC
Q 014742 354 GNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGA-PLTQGYGMVE 419 (419)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~-~v~~~YG~tE 419 (419)
+ .++ +++|. ++||+++++++++.+++. +. .++++||+||
T Consensus 202 -------------~----~~l--------~slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TE 241 (386)
T TIGR02372 202 -------------D----YRL--------PGVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATE 241 (386)
T ss_pred -------------C----cCC--------Cccee-EecCCCCCHHHHHHHHHh-cccchhheecccc
Confidence 0 012 25675 678999999999999985 64 6999999998
No 123
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.76 E-value=1.2e-17 Score=161.12 Aligned_cols=150 Identities=26% Similarity=0.364 Sum_probs=120.2
Q ss_pred CCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEE
Q 014742 216 PKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIG 295 (419)
Q Consensus 216 ~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~iv 295 (419)
...++++++++|||||||.||+|.++|.++...+......+ ...++++..+|++|.+++..++.++..|++++
T Consensus 31 ~~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~-------~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v 103 (358)
T PRK07824 31 EPIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL-------GGPGQWLLALPAHHIAGLQVLVRSVIAGSEPV 103 (358)
T ss_pred CCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc-------CCCCeEEEECChHHHHHHHHHHHHHHcCCeEE
Confidence 34468999999999999999999999999998877654433 24578899999999999988888899999988
Q ss_pred Ee---CC-CHHHHHHHhhhhc--CeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccCCCCCCchhhH
Q 014742 296 FW---RG-DVRYLMEDIQELK--PTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLL 369 (419)
Q Consensus 296 l~---~~-~~~~~~~~i~~~~--~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (419)
+. .. ++..+++.+++++ .++...+|..+..++.. +.
T Consensus 104 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~-------------------------------------~~- 145 (358)
T PRK07824 104 ELDVSAGFDPTALPRAVAELGGGRRYTSLVPMQLAKALDD-------------------------------------PA- 145 (358)
T ss_pred ecCcCCCcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhC-------------------------------------cc-
Confidence 73 22 8999999999998 56666788777665431 00
Q ss_pred HHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 370 DSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 370 ~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
....+ .++|.+++||+++++++.+++.+ +++++++.||+||
T Consensus 146 ~~~~~--------~~l~~i~~gG~~l~~~~~~~~~~-~~~~v~~~YG~TE 186 (358)
T PRK07824 146 ATAAL--------AELDAVLVGGGPAPAPVLDAAAA-AGINVVRTYGMSE 186 (358)
T ss_pred ccCCc--------ccceEEEECCCCCCHHHHHHHHh-cCCcEEecccCCc
Confidence 00012 38999999999999999999987 4999999999998
No 124
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.74 E-value=1.4e-16 Score=160.91 Aligned_cols=271 Identities=11% Similarity=0.084 Sum_probs=206.5
Q ss_pred CCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhC-CCCCCCeEEEEcCCchhHHHHHHH
Q 014742 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSR-GVNPGDRCGIYGSNCPEWIIAMEA 121 (419)
Q Consensus 43 ~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~-g~~~gd~V~l~~~n~~~~~~~~lA 121 (419)
.++.|+|+..+..+||++|+... ++.+.+..++||.+|..++.+++..|+.. -+++||.|+++++++.|++++++|
T Consensus 770 ~~ile~Lq~R~a~tp~~~a~~~~---n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~ 846 (1363)
T KOG3628|consen 770 LTILEILQWRAAKTPDHIAFTTL---NARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYA 846 (1363)
T ss_pred HHHHHHHHHHhhcCCCceEEEEe---ccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHH
Confidence 67999999999999999999988 77777778999999999999999999976 589999999999999999999999
Q ss_pred HHHcCCeEEeeccCC------ChhHHHHHHhhcCceEEEEeCCChhhHhhcC--c-cCCCCccEEEEecCCChhhHHHHH
Q 014742 122 CNSQAITYVPLYDTL------GANAVEFIINHAEVSIAFVQENKIPSILSCL--P-RCCLYLKTIVSFANVSSSQKKEAE 192 (419)
Q Consensus 122 ~~~~G~~~vpl~~~~------~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~ 192 (419)
|+.+|.+++|+.|.- ....+..+++.+++..|+++......+.+.- . .....++.++..++......
T Consensus 847 Cly~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~~~~t~~---- 922 (1363)
T KOG3628|consen 847 CLYLGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPKLPETIR---- 922 (1363)
T ss_pred HHhcCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcccccchhhh----
Confidence 999999999997754 3356889999999999999975433221110 0 01123444555444321100
Q ss_pred HhCceeeeHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEe
Q 014742 193 ELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSF 272 (419)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~ 272 (419)
.......+. ....+.-......+|++=+.--++|.--+|.+||..+++......+.. .+.+...++..
T Consensus 923 ------k~~~~~~k~-~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~-----~l~~~rpl~~~ 990 (1363)
T KOG3628|consen 923 ------KRKKNIKKL-NTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETC-----QLYKSRPLLGC 990 (1363)
T ss_pred ------hhhhhhhcc-CCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHH-----ccccCCceEEE
Confidence 001111111 111222233567889998888899999999999999999999987766 67777777777
Q ss_pred cChHHHHHHHH-HHHHHhcCceEEEeCC-----CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHH
Q 014742 273 LPLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISN 332 (419)
Q Consensus 273 ~pl~h~~g~~~-~l~~l~~G~~ivl~~~-----~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~ 332 (419)
.+.+.+.|+.. ++...+.|.+.++.+. ++..+++.|+++++.-++.+=..++...+++.+
T Consensus 991 ~~~~sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t 1056 (1363)
T KOG3628|consen 991 SSPYSGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLET 1056 (1363)
T ss_pred ecCccchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhcccc
Confidence 77777778875 7888999999877753 999999999999999888877777776665444
No 125
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.71 E-value=1.9e-16 Score=156.11 Aligned_cols=157 Identities=19% Similarity=0.193 Sum_probs=120.7
Q ss_pred CCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHH-HHHHHHhcCceEEE
Q 014742 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQI-IETHCIHKGCSIGF 296 (419)
Q Consensus 218 ~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~-~~l~~l~~G~~ivl 296 (419)
..++++.+++||||||.||+|.++|.++..........+. ..+..++|++++..++.+..+.. ..+..+..|++++.
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~--~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 150 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIR--AAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVP 150 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHH--HcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEe
Confidence 4567888999999999999999999998765444322211 12677889988876554333322 34567788999887
Q ss_pred eCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHH
Q 014742 297 WRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFS 375 (419)
Q Consensus 297 ~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 375 (419)
.+. +++.+++.|++++||++.++|+++..|++.++... .+ .+.
T Consensus 151 ~~~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~-------------------------------~~-~~~---- 194 (422)
T TIGR02155 151 ISGGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMG-------------------------------ID-PAQ---- 194 (422)
T ss_pred cCCCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcC-------------------------------CC-ccc----
Confidence 765 88999999999999999999999999876432210 00 000
Q ss_pred HHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 376 KIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 376 ~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
.++|.+++||+++++++.+.+++.||+++++.||+||
T Consensus 195 -------~~lr~i~~~ge~l~~~~~~~i~~~~g~~v~~~YG~tE 231 (422)
T TIGR02155 195 -------TSLQVGIFGAEPWTNAMRKEIEARLGMKATDIYGLSE 231 (422)
T ss_pred -------CceEEEEEeCCcCCHHHHHHHHHHhCCceEecccchh
Confidence 2799999999999999999999999999999999998
No 126
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.63 E-value=5.4e-15 Score=146.25 Aligned_cols=157 Identities=18% Similarity=0.176 Sum_probs=120.1
Q ss_pred CCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHH-HHHHHhcCceEE
Q 014742 217 KKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIG 295 (419)
Q Consensus 217 ~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~-~l~~l~~G~~iv 295 (419)
...++++.+.+||||||.||+|.+||.++...+......+. ..++.++|+++...++.+..+... .++++..|++++
T Consensus 83 ~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~--~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi 160 (445)
T TIGR03335 83 ADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFV--SQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSII 160 (445)
T ss_pred CCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHH--HcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEE
Confidence 34568899999999999999999999998876655443321 126778899999888877655544 456678888765
Q ss_pred EeCCCHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHH
Q 014742 296 FWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFS 375 (419)
Q Consensus 296 l~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 375 (419)
.. ......++.|+++++|.+.++|..+..+++.++.. | .+ .+ .
T Consensus 161 ~~-~~~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~-------------------------g------~~-~~---~- 203 (445)
T TIGR03335 161 PE-GKCTFPIRIIESYRPTGIVASVFKLLRLARRMKAE-------------------------G------ID-PA---E- 203 (445)
T ss_pred cC-CchhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHc-------------------------C------CC-cc---c-
Confidence 33 34456789999999999999999888776543221 0 00 00 0
Q ss_pred HHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 376 KIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 376 ~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
.++|.+++||+++++++.+.+++.||+++++.||+||
T Consensus 204 -------~~lr~ii~gGE~l~~~~r~~ie~~~g~~v~~~YG~TE 240 (445)
T TIGR03335 204 -------SSIRRLVVGGESFADESRNYVEELWGCEVYNTYGSTE 240 (445)
T ss_pred -------CcceEEEEcCCCCCHHHHHHHHHHhCCcEEecCChhh
Confidence 2899999999999999999999999999999999998
No 127
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.44 E-value=8.1e-13 Score=137.55 Aligned_cols=307 Identities=15% Similarity=0.121 Sum_probs=191.6
Q ss_pred CCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHH
Q 014742 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (419)
Q Consensus 42 ~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA 121 (419)
..++...+.+.+...|.+++..+.+. ....+....+||.+....++.+++.|...|...|+.|++++..+.++++..++
T Consensus 35 ~g~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~ 113 (1032)
T KOG1178|consen 35 MGTLEDSFRRELAEAPENTGHVIIPT-ASESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFA 113 (1032)
T ss_pred hcchhhHHHHHHhhcccCCCceEeec-ccccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeee
Confidence 34566678888999999988876644 22345556899999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhh--HhhcCccCCCCccEEEEecCCChhhHHHHHHhCceee
Q 014742 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPS--ILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (419)
Q Consensus 122 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (419)
.+++|..+++++|.++..++...+.....-..-...+.... +...... ...+..-+ .. ...
T Consensus 114 ~~~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~~~l~i~~~~~~--~~~~~~sv-~~--------------~~~ 176 (1032)
T KOG1178|consen 114 VLAAGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIVRRLNIIDILLN--SLFPKLSV-ET--------------IAD 176 (1032)
T ss_pred hhhcceEEEEecCCCcccccchHHHhhhhhheeccceehhhhhhHHHHhh--ccccccch-hh--------------ccc
Confidence 99999999999999992111111111111001010000000 0000000 00000000 00 001
Q ss_pred eHHHHHhcCCCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecC-h-HH
Q 014742 200 SWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLP-L-AH 277 (419)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p-l-~h 277 (419)
++..+.... .........++..+.+.||||+||.||+|..+|..+.....+....+ ..+..+++ ...+ . ++
T Consensus 177 ~f~~~~~~~-~~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f-----~~t~s~~~-~~~~~~~~~ 249 (1032)
T KOG1178|consen 177 SFQMVLHNE-DTREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTF-----PPTGSDRF-TFKTSVYFD 249 (1032)
T ss_pred hhhhhhccC-CCcceeeecccccceEeecccccccccccchhHHHHHhhhhhccccC-----CcCccchh-hhhheeecc
Confidence 111111111 11122234567789999999999999999999999999998876665 66666664 2221 2 12
Q ss_pred HHHHHHHHHHHhcCceEEEeCC----CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhh
Q 014742 278 IYDQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKL 353 (419)
Q Consensus 278 ~~g~~~~l~~l~~G~~ivl~~~----~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (419)
..-...+.+.|..|+.+..+.. ++..+...+++++++....+|++.+.++...... .....++
T Consensus 250 d~i~~~~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~--------~~~l~~~----- 316 (1032)
T KOG1178|consen 250 DTIQKFIGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTS--------LPLLEHA----- 316 (1032)
T ss_pred cchHHHHhhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcc--------hhhhhhh-----
Confidence 2112223344556665655533 4789999999999999999999988876532110 0000000
Q ss_pred hhhccCCCCCCchhhHHHHHHHHHHHHhC--CcEeEEEEccCCCCHHHHHHHHHhh
Q 014742 354 GNMKKGMPQNKAAPLLDSLVFSKIREAFG--GRLQAMLSGAAPLPIHVEEFLRVTS 407 (419)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g--~~lr~v~~~G~~l~~~~~~~~~~~~ 407 (419)
-.+.+..+ ..|+....+|++...++...+...+
T Consensus 317 ---------------------~~~~dl~~~~~~Lkl~~~~~ep~~v~l~~s~~~~~ 351 (1032)
T KOG1178|consen 317 ---------------------FSLSDLLTKRSCLKLVVLGGEPLLVSLYTSTFDLL 351 (1032)
T ss_pred ---------------------hhcccccccchhheeeeecCCccchhhhhhhhhcc
Confidence 00001111 3789999999999999998666655
No 128
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.37 E-value=1e-11 Score=118.23 Aligned_cols=159 Identities=18% Similarity=0.145 Sum_probs=120.1
Q ss_pred CCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHH-HHHHHHHHHHHhcCceE
Q 014742 216 PKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAH-IYDQIIETHCIHKGCSI 294 (419)
Q Consensus 216 ~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h-~~g~~~~l~~l~~G~~i 294 (419)
....++...|--||||||+|+-+.+++..+...+..+...+... +...+|++....-... ..|+..-.++--.|+++
T Consensus 86 ~~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~--g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~v 163 (438)
T COG1541 86 AVPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSA--GVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATV 163 (438)
T ss_pred cccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHc--cCCCCCEEEEEeeeccccCCchhHHHHHhhCEEE
Confidence 34456677788899999999999999999998888887766443 6667787765543211 11122222333355555
Q ss_pred EEeCC-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHH
Q 014742 295 GFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLV 373 (419)
Q Consensus 295 vl~~~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (419)
+=... +.+.-++.++.+++|++.++|+.+..|++.++..- ...+.
T Consensus 164 ip~~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G--------------------------------~~~~~-- 209 (438)
T COG1541 164 IPISGGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEG--------------------------------IDPDK-- 209 (438)
T ss_pred EccCCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcC--------------------------------CChhh--
Confidence 44433 89999999999999999999999999988655431 11222
Q ss_pred HHHHHHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 374 FSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 374 l~~~~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
-++|.+++|+|++++++.+.+.+.||+.+++.||+||
T Consensus 210 ---------~~lk~~i~gaE~~see~R~~ie~~~g~~~~diYGltE 246 (438)
T COG1541 210 ---------LSLKKGIFGAEPWSEEMRKVIENRFGCKAFDIYGLTE 246 (438)
T ss_pred ---------cceeEEEEecccCCHHHHHHHHHHhCCceeecccccc
Confidence 2899999999999999999999999999999999998
No 129
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=98.91 E-value=3.6e-08 Score=96.16 Aligned_cols=142 Identities=15% Similarity=0.176 Sum_probs=96.1
Q ss_pred EEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEe--cChHHHHHHHHHHHHHhcC-ceEEEeC-
Q 014742 223 STIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSF--LPLAHIYDQIIETHCIHKG-CSIGFWR- 298 (419)
Q Consensus 223 ~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~--~pl~h~~g~~~~l~~l~~G-~~ivl~~- 298 (419)
..+..||||||.|-.+..+................. .+...++++... .+- +.+. .+... ..+...+
T Consensus 102 ~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~--~g~~~g~r~a~~~~~~~-~ly~------~~~~~~~~~~~~~l 172 (430)
T TIGR02304 102 ISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLP--DGLFAKHRIAFFLRADN-NLYQ------SVNNRWISLDFFDL 172 (430)
T ss_pred EEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCc--cccccCCcEEEEEccCh-hHHH------HHHhccceeeecCC
Confidence 556679999999999999998765433332222111 133333444333 211 1111 11111 1122221
Q ss_pred -CCHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHH
Q 014742 299 -GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKI 377 (419)
Q Consensus 299 -~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 377 (419)
.+.+..++.|++++|+.+.+.|+.+..|++..+... .+
T Consensus 173 ~~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~----------------------------------l~------- 211 (430)
T TIGR02304 173 LAPFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGE----------------------------------LT------- 211 (430)
T ss_pred CcCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcC----------------------------------CC-------
Confidence 388999999999999999999999999987533210 00
Q ss_pred HHHhCCcEeEEEEccCCCCHHHHHHHHHhhCCceeeeccCCC
Q 014742 378 REAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGMVE 419 (419)
Q Consensus 378 ~~~~g~~lr~v~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE 419 (419)
-+++.++++||.++++..+.+++.||++|++.||+||
T Consensus 212 -----~~~k~ii~~~E~l~~~~r~~Ie~~fg~~V~~~YG~tE 248 (430)
T TIGR02304 212 -----IKPKKVISVAEVLEPQDRELIRNVFKNTVHQIYQATE 248 (430)
T ss_pred -----CCceEEEEccCCCCHHHHHHHHHHhCCCeeEccCCch
Confidence 1689999999999999999999999999999999998
No 130
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=98.88 E-value=4.5e-08 Score=100.44 Aligned_cols=251 Identities=16% Similarity=0.168 Sum_probs=182.5
Q ss_pred CCCCHHHHHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHH-HHHhCCCCCCCeEEEEcCCc--hhHHH
Q 014742 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGS-AMRSRGVNPGDRCGIYGSNC--PEWII 117 (419)
Q Consensus 41 ~~~tl~~~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~-~L~~~g~~~gd~V~l~~~n~--~~~~~ 117 (419)
....+..+++..-.+++..+|.+.. |.++. ...+||..+..++.++|+ .|-..|+.++|+|.++...+ .++++
T Consensus 92 a~~d~~avl~~~~nhs~~~ta~i~i---d~kgk-~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~i 167 (1363)
T KOG3628|consen 92 ALTDIIAVLRYRRNHSATSTAHICI---DKKGK-ATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLI 167 (1363)
T ss_pred hhcchHHHHHhhccCCCCCceEEEE---cCCCc-eeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhh
Confidence 3445777788888899999999988 66555 788999999999999999 67788999999999999855 89999
Q ss_pred HHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCCChhhHHHHHHhCce
Q 014742 118 AMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVS 197 (419)
Q Consensus 118 ~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (419)
..++|...|..++|+.+..+.+++..++.....+++++.......+....... .+.+ .
T Consensus 168 sl~gc~l~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~--s~~k------------~-------- 225 (1363)
T KOG3628|consen 168 SLFGCFLLGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNSPV--SLAK------------A-------- 225 (1363)
T ss_pred hhccccccceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCcc--cHHH------------H--------
Confidence 99999999999999999999999999999999999999887665443322100 0000 0
Q ss_pred eeeHHHHHhcC---CCCCCCCCCCCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhh---------------hhc
Q 014742 198 CFSWEEFLQLG---TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMF---------------VVT 259 (419)
Q Consensus 198 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~---------------~~~ 259 (419)
+..|....-.+ .+....+..... .++|-||.+++|.--||+.+|. ++.+.+.+.... ...
T Consensus 226 v~~w~t~~~k~~~~~~k~~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~ 303 (1363)
T KOG3628|consen 226 VAWWKTNDFKGNYTKDKIKKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAH 303 (1363)
T ss_pred HHhhhcccccceeehhhccCCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhh
Confidence 00010000000 001111112223 8999999999999999999998 555444332211 122
Q ss_pred CccCCCCcEEEEecChHHHHHHHH-HHHHHhcCceEEEeCC----CHHHHHHHhhhhcCeEEEec
Q 014742 260 GKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGV 319 (419)
Q Consensus 260 ~~~~~~~d~~l~~~pl~h~~g~~~-~l~~l~~G~~ivl~~~----~~~~~~~~i~~~~~t~l~~~ 319 (419)
.......+.++.........|+++ ++.++.+|.|...+++ .+..+.+.+.+++.+++..-
T Consensus 304 v~~~~~~~~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd 368 (1363)
T KOG3628|consen 304 VFPVPSEDVLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTD 368 (1363)
T ss_pred ccccCcccceeeccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeec
Confidence 223445677777777777888887 8889999999999886 77888899999999988654
No 131
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=97.79 E-value=0.00047 Score=65.99 Aligned_cols=160 Identities=14% Similarity=0.168 Sum_probs=89.4
Q ss_pred CCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHH---HHHHH--HHHHHHhcCc
Q 014742 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAH---IYDQI--IETHCIHKGC 292 (419)
Q Consensus 218 ~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h---~~g~~--~~l~~l~~G~ 292 (419)
.++++..++-||||||.|--+.+.+..+......+...+.......+..-.++...|-.. .++.. ..+..+..+.
T Consensus 87 ~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (365)
T PF04443_consen 87 PEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGS 166 (365)
T ss_pred ChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCc
Confidence 356677888899999998666666666665554544443211111111223333333321 11111 1223344555
Q ss_pred eEEEeCC--CHHHHHHHh----hhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccCCCCCCch
Q 014742 293 SIGFWRG--DVRYLMEDI----QELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAA 366 (419)
Q Consensus 293 ~ivl~~~--~~~~~~~~i----~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (419)
.-.+-.. |.+.+++.+ .+.++.++++.|.++-.+++.+++....
T Consensus 167 ~~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~------------------------------ 216 (365)
T PF04443_consen 167 RFALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIR------------------------------ 216 (365)
T ss_pred eeeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCc------------------------------
Confidence 5444222 666666655 4667899999999887776644432110
Q ss_pred hhHHHHHHHHHHHHhCCcEeEEEEcc------CCCC-HHHHHHHHHhhCC----ceeeeccCCC
Q 014742 367 PLLDSLVFSKIREAFGGRLQAMLSGA------APLP-IHVEEFLRVTSGA----PLTQGYGMVE 419 (419)
Q Consensus 367 ~~~~~~~l~~~~~~~g~~lr~v~~~G------~~l~-~~~~~~~~~~~~~----~v~~~YG~tE 419 (419)
+.|+ ...+.+-.|| +.++ ++..+.+.+.||+ .+++.|||||
T Consensus 217 -----~~L~-------~~s~vi~~GGwK~~~~e~v~r~ef~~~l~~~~Gv~~~~~i~~~ygmtE 268 (365)
T PF04443_consen 217 -----FRLP-------KGSIVIHGGGWKGRRKEAVSREEFYARLQEVFGVIPIENIYDMYGMTE 268 (365)
T ss_pred -----ccCC-------CCCEEEeCCCCCccccCccCHHHHHHHHHHHHCCCCHHHeeeeeeccc
Confidence 0000 1334444443 3454 5777888888898 5999999998
No 132
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=95.40 E-value=0.063 Score=52.13 Aligned_cols=106 Identities=12% Similarity=0.001 Sum_probs=81.7
Q ss_pred EeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCc--hhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEE
Q 014742 77 WLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNC--PEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAF 154 (419)
Q Consensus 77 ~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~--~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi 154 (419)
-+|+.|+...+..+|+.|...|..+||+|..+..-+ ..-+...+|+.++|+.++|+.+. .-+.-..+++..++.+|.
T Consensus 109 ~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g-~~~~~~~l~~df~~tvI~ 187 (438)
T COG1541 109 GYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGG-NTERQLELMKDFKPTVIA 187 (438)
T ss_pred ecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCc-cHHHHHHHHHhcCCcEEE
Confidence 479999999999999999999999999998887722 11167889999999999999883 345567889999999999
Q ss_pred EeCCChhhHhhcCccC-----CCCccEEEEecCC
Q 014742 155 VQENKIPSILSCLPRC-----CLYLKTIVSFANV 183 (419)
Q Consensus 155 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 183 (419)
+.....-.+.+..... ...++.++...+.
T Consensus 188 ~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~ 221 (438)
T COG1541 188 ATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEP 221 (438)
T ss_pred EChHHHHHHHHHHHHcCCChhhcceeEEEEeccc
Confidence 9987766555554433 2345666665444
No 133
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=92.90 E-value=0.11 Score=52.61 Aligned_cols=31 Identities=26% Similarity=0.172 Sum_probs=25.0
Q ss_pred CCCCceEEEEeCCCCCCC-CCeEEeechhHHH
Q 014742 217 KKKTNISTIMYTSGTTGE-PKGVVLTNQAIVA 247 (419)
Q Consensus 217 ~~~~~~~~i~~TSGtTG~-PK~V~~sh~~l~~ 247 (419)
..++.+.+...||||||. ||-+.+|...+..
T Consensus 77 L~~~~~~~f~~TSGTTg~~~K~IP~T~~~l~~ 108 (528)
T PF03321_consen 77 LTPGPPIYFALTSGTTGGKSKLIPYTKEFLKE 108 (528)
T ss_dssp TSSS--SEEEEEEEEETTEEEEEEESHHHHHH
T ss_pred CCCCCCCeEEeCCCCCCCCCceeeccHHHHHH
Confidence 346678899999999999 9999999987755
No 134
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=89.42 E-value=3.2 Score=41.30 Aligned_cols=104 Identities=15% Similarity=0.110 Sum_probs=72.0
Q ss_pred EeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchh--HHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEE
Q 014742 77 WLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE--WIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAF 154 (419)
Q Consensus 77 ~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi 154 (419)
.+|..++...+...++.+...|+++||++.++.+.+.. ....++++...|+.++|... ......+++..++..++
T Consensus 105 ~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l~ 181 (445)
T TIGR03335 105 FLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGIV 181 (445)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEEE
Confidence 47999999988888888888899999999998875543 23456788899998887653 23456788999999888
Q ss_pred EeCCChhhHhhcCcc-----CCCCccEEEEecCC
Q 014742 155 VQENKIPSILSCLPR-----CCLYLKTIVSFANV 183 (419)
Q Consensus 155 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 183 (419)
........+.+...+ ....++.++...+.
T Consensus 182 ~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~ 215 (445)
T TIGR03335 182 ASVFKLLRLARRMKAEGIDPAESSIRRLVVGGES 215 (445)
T ss_pred ECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCC
Confidence 765543332221111 11356666665544
No 135
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=88.64 E-value=3.3 Score=40.72 Aligned_cols=114 Identities=18% Similarity=0.096 Sum_probs=77.5
Q ss_pred CCCCCceeE--eeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCch--hHHHHHHHHHHcCCeEEeeccCCChhHHHHH
Q 014742 69 DGKVGPYVW--LTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCP--EWIIAMEACNSQAITYVPLYDTLGANAVEFI 144 (419)
Q Consensus 69 ~~~~~~~~~--~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~--~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~ 144 (419)
.|.++.... +|..++......+++.+...|+++||++......+. .....++++...|+.+++++... .+.+...
T Consensus 84 SGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~ 162 (422)
T TIGR02155 84 SGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQL 162 (422)
T ss_pred CCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHH
Confidence 444554443 577788777777777888889999999887665443 22334677889999999987754 4778899
Q ss_pred HhhcCceEEEEeCCChhhHhhcCccC-----CCCccEEEEecCC
Q 014742 145 INHAEVSIAFVQENKIPSILSCLPRC-----CLYLKTIVSFANV 183 (419)
Q Consensus 145 l~~~~~~~vi~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 183 (419)
++..++.+++.....+..+.+..... ...++.++...+.
T Consensus 163 i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~ 206 (422)
T TIGR02155 163 IQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEP 206 (422)
T ss_pred HHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCc
Confidence 99999999999887665444322111 1245565555443
No 136
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=80.44 E-value=11 Score=33.59 Aligned_cols=54 Identities=19% Similarity=0.222 Sum_probs=43.8
Q ss_pred HhCCCCCCCeEEEEcCCch--hHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCc
Q 014742 95 RSRGVNPGDRCGIYGSNCP--EWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEV 150 (419)
Q Consensus 95 ~~~g~~~gd~V~l~~~n~~--~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~ 150 (419)
...|+.++|++. .+|-.- .+...+++++..|+..+.. ++++++++...+++.++
T Consensus 171 ~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 171 RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERV 226 (227)
T ss_pred hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcC
Confidence 556889999999 888443 3445689999999998887 68999999999888765
No 137
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=77.98 E-value=22 Score=34.50 Aligned_cols=90 Identities=14% Similarity=0.072 Sum_probs=69.7
Q ss_pred CCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEe
Q 014742 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (419)
Q Consensus 218 ~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~ 297 (419)
.++.++++. =....+|+.++...+..+...+.. .++..++++....+-.. ..+..+++++..|+..+..
T Consensus 8 ~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~--~g~~~~~~V~i~~~n~~-~~~~~~~A~~~~G~~~v~l 76 (417)
T PF00501_consen 8 YPDRIALID--------DEGRSLTYKQLYERVRKLAAALRK--LGVKKGDRVAILLPNSI-EFVVAFLACLRAGAIPVPL 76 (417)
T ss_dssp STTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHH--TTSSTTSEEEEEESSSH-HHHHHHHHHHHTT-EEEEE
T ss_pred CCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHH--hCCCccccccccCCccc-eeeeeeccccccccccccc
Confidence 467777766 223579999999999998887752 36778888887777643 3344578899999999998
Q ss_pred CC--CHHHHHHHhhhhcCeEEEe
Q 014742 298 RG--DVRYLMEDIQELKPTMFSG 318 (419)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~l~~ 318 (419)
+. ..+.+...+++.++.++++
T Consensus 77 ~~~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 77 DPSLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp ETTSSHHHHHHHHHHHTESEEEE
T ss_pred ccccccccccccccccceeEEEE
Confidence 65 8899999999999999997
No 138
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=75.23 E-value=24 Score=35.38 Aligned_cols=122 Identities=18% Similarity=0.126 Sum_probs=79.8
Q ss_pred CCCCCceeeeeccCCCCCcee--EeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCch--hHHHHHHHHHHcCCeEEe
Q 014742 56 IPNNQMLGGRKVSDGKVGPYV--WLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCP--EWIIAMEACNSQAITYVP 131 (419)
Q Consensus 56 ~pd~~ai~~~~~~~~~~~~~~--~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~--~~~~~~lA~~~~G~~~vp 131 (419)
.++.++.+... .|.++..+ .+|+..+...+...... .++++++++...++-.. .+...+++++..|+.+++
T Consensus 164 ~~~~~a~i~~T--SGtTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~ 238 (513)
T PRK07656 164 DPDDVADILFT--SGTTGRPKGAMLTHRQLLSNAADWAEY---LGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILP 238 (513)
T ss_pred CCCceEEEEeC--CCCCCCCCEEEEecHHHHHHHHHHHHh---hCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEe
Confidence 34555554331 34444433 57888887666554433 47889999988887543 334557889999998887
Q ss_pred eccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCcc---CCCCccEEEEecCC
Q 014742 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPR---CCLYLKTIVSFANV 183 (419)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 183 (419)
. +..+.+.+...+++.++.+++.....+..+.+.... ....++.++..++.
T Consensus 239 ~-~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~g~~ 292 (513)
T PRK07656 239 L-PVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAEDLSSLRLAVTGAAS 292 (513)
T ss_pred c-CcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCCccceeeEEecCCC
Confidence 5 567889999999999999998887766665543322 22345555554443
No 139
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=75.08 E-value=30 Score=33.78 Aligned_cols=117 Identities=12% Similarity=0.002 Sum_probs=77.7
Q ss_pred CCCCceeeeeccCCCCCcee--EeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCch-hHHHHHHHHHHcCCeEEeec
Q 014742 57 PNNQMLGGRKVSDGKVGPYV--WLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCP-EWIIAMEACNSQAITYVPLY 133 (419)
Q Consensus 57 pd~~ai~~~~~~~~~~~~~~--~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~-~~~~~~lA~~~~G~~~vpl~ 133 (419)
+++++++... .|.++..+ .+|+..+...+......+ +++++|++....+-.. ..+..+++++..|+..+..+
T Consensus 110 ~~~~~~i~~T--SGtTG~PK~v~~s~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~ 184 (436)
T TIGR01923 110 MDQIATLMFT--SGTTGKPKAVPHTFRNHYASAVGSKENL---GFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVD 184 (436)
T ss_pred cCceEEEEeC--CCCCCCCcEEEEehHHHHHHHHHHHhhc---CCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecc
Confidence 3455554331 44444433 679999887776665544 7899999988877432 22334678889999888776
Q ss_pred cCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecC
Q 014742 134 DTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFAN 182 (419)
Q Consensus 134 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (419)
.. +.+...+++.++.++......+..+.+..... ..++.++....
T Consensus 185 ~~---~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~-~~l~~~~~~G~ 229 (436)
T TIGR01923 185 KF---NQLLEMIANERVTHISLVPTQLNRLLDEGGHN-ENLRKILLGGS 229 (436)
T ss_pred hH---HHHHHHHHHhCCeEEEeHHHHHHHHHhCcCCC-CceEEEEECCC
Confidence 53 48888999999999998887766665543322 45565555444
No 140
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=74.03 E-value=32 Score=34.44 Aligned_cols=120 Identities=9% Similarity=-0.056 Sum_probs=79.6
Q ss_pred CCCceeeeeccCCCCCcee--EeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhH-HHHHHHHHHcCCeEEeecc
Q 014742 58 NNQMLGGRKVSDGKVGPYV--WLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW-IIAMEACNSQAITYVPLYD 134 (419)
Q Consensus 58 d~~ai~~~~~~~~~~~~~~--~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~-~~~~lA~~~~G~~~vpl~~ 134 (419)
+.++++.. ..|.++..+ .+|+..+...+..... ..+++++|++....+....+ +...++++..|+..+..+.
T Consensus 167 ~~~~~i~~--TSGtTG~PK~v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~ 241 (521)
T PRK06187 167 NDAAAMLY--TSGTTGHPKGVVLSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRR 241 (521)
T ss_pred cceEEEEE--CCCCCCCCceEEeehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCC
Confidence 44555433 144444433 5688888876666555 44788999999888754333 3344568888998887766
Q ss_pred CCChhHHHHHHhhcCceEEEEeCCChhhHhhcCcc---CCCCccEEEEecCC
Q 014742 135 TLGANAVEFIINHAEVSIAFVQENKIPSILSCLPR---CCLYLKTIVSFANV 183 (419)
Q Consensus 135 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 183 (419)
. +.+.+...+++.++..+++....+..+.+.... ....++.++..++.
T Consensus 242 ~-~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~Ge~ 292 (521)
T PRK06187 242 F-DPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGGAA 292 (521)
T ss_pred C-CHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEcCcC
Confidence 4 889999999999999999988766655544322 22455665555443
No 141
>PLN03102 acyl-activating enzyme; Provisional
Probab=72.04 E-value=44 Score=34.35 Aligned_cols=86 Identities=8% Similarity=-0.020 Sum_probs=67.6
Q ss_pred EeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEE
Q 014742 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (419)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l 316 (419)
.+|...+...+..+...+.. .++.++|++...+|-.-. ....+++++..|+.++..+. +.+.+...++..+++.+
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~--~Gl~~gd~Vai~~~n~~e-~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~i 115 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLIS--LNITKNDVVSVLAPNTPA-MYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKIL 115 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCcHH-HHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEE
Confidence 68999999999888886643 367889999888885432 23347788999998887765 89999999999999999
Q ss_pred EecchHHHHHH
Q 014742 317 SGVPRVYDRIY 327 (419)
Q Consensus 317 ~~~P~~~~~l~ 327 (419)
++.+.....+.
T Consensus 116 i~~~~~~~~~~ 126 (579)
T PLN03102 116 FVDRSFEPLAR 126 (579)
T ss_pred EEChhhHHHHH
Confidence 98877665443
No 142
>PLN03052 acetate--CoA ligase; Provisional
Probab=71.63 E-value=53 Score=35.00 Aligned_cols=101 Identities=15% Similarity=0.103 Sum_probs=75.8
Q ss_pred CCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEe
Q 014742 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (419)
Q Consensus 218 ~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~ 297 (419)
.++.++++.-..+..|.+ ...+|...+...+..+...+.. .++.++|++...+|-.-- .+..+++++..|+..+.+
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~--~Gv~~GdrVai~~pn~~e-~via~LA~~~~Gav~vpi 263 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDA--LGFEKGDAIAIDMPMNVH-AVIIYLAIILAGCVVVSI 263 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEeCCCHH-HHHHHHHHHHcCCEEEee
Confidence 357777765443322222 3568999999999998887743 378899999999887433 344578889999998877
Q ss_pred CC--CHHHHHHHhhhhcCeEEEecchH
Q 014742 298 RG--DVRYLMEDIQELKPTMFSGVPRV 322 (419)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~l~~~P~~ 322 (419)
.. .++.+...++..++..+++....
T Consensus 264 ~p~~~~~~l~~rl~~~~~k~lit~d~~ 290 (728)
T PLN03052 264 ADSFAPSEIATRLKISKAKAIFTQDVI 290 (728)
T ss_pred CCCCCHHHHHHHHHhcCceEEEEcCcc
Confidence 54 88999999999999999987754
No 143
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=71.37 E-value=48 Score=30.87 Aligned_cols=61 Identities=8% Similarity=0.105 Sum_probs=44.1
Q ss_pred hCC-CCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeC
Q 014742 96 SRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 157 (419)
Q Consensus 96 ~~g-~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~ 157 (419)
+.| ++||+.|.= .-.+---+...+.|...|.-++..=|..-..+-..+|+..++.+++++.
T Consensus 55 ~~G~l~pG~tIVE-~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 55 KRGLLKPGGTIVE-ATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HcCCCCCCCEEEE-cCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 345 889995443 3334444556667777888777666666667778999999999999998
No 144
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=71.05 E-value=57 Score=34.18 Aligned_cols=96 Identities=15% Similarity=0.184 Sum_probs=72.9
Q ss_pred CCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeC
Q 014742 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (419)
Q Consensus 219 ~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~ 298 (419)
++.++++.-..+. + ....+|.+.+...+..+...+.. .++.++|++...+|..-- ....+++++..|+..+...
T Consensus 75 ~~~~A~~~~~~~~-~--~~~~~Ty~eL~~~v~~lA~~L~~--~Gv~~GDrV~i~~~n~~e-~~~~~lA~~~~Gav~vpl~ 148 (647)
T PTZ00237 75 RDQDALIYECPYL-K--KTIKLTYYQLYEKVCEFSRVLLN--LNISKNDNVLIYMANTLE-PLIAMLSCARIGATHCVLF 148 (647)
T ss_pred CCceEEEEEcCCC-C--ceEEEEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCHH-HHHHHHHHHHhCcEEEeeC
Confidence 4666765532211 1 23579999999999998887743 378899999999888643 3344788899999987775
Q ss_pred C--CHHHHHHHhhhhcCeEEEecc
Q 014742 299 G--DVRYLMEDIQELKPTMFSGVP 320 (419)
Q Consensus 299 ~--~~~~~~~~i~~~~~t~l~~~P 320 (419)
. .++.+...|+..++..+++..
T Consensus 149 ~~~~~~~l~~~l~~~~~~~li~~~ 172 (647)
T PTZ00237 149 DGYSVKSLIDRIETITPKLIITTN 172 (647)
T ss_pred CCCCHHHHHHHHHhcCCCEEEEcc
Confidence 4 899999999999999999875
No 145
>PRK09274 peptide synthase; Provisional
Probab=70.20 E-value=42 Score=34.13 Aligned_cols=99 Identities=10% Similarity=0.045 Sum_probs=70.6
Q ss_pred CCceEEEEeCCCC-CCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEe
Q 014742 219 KTNISTIMYTSGT-TGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (419)
Q Consensus 219 ~~~~~~i~~TSGt-TG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~ 297 (419)
++.++++....++ ....+-..+|+.++...+..+...+.. .++.++|++...++-... ....+++++..|+..+..
T Consensus 20 p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~--~g~~~gd~V~~~~~n~~~-~~~~~la~~~~G~~~v~l 96 (552)
T PRK09274 20 PDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNA--AGIGRGMRAVLMVTPSLE-FFALTFALFKAGAVPVLV 96 (552)
T ss_pred CCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEeCCcHH-HHHHHHHHHHcCeEEEEc
Confidence 4556655433222 122333478999999999888887643 367889999988775432 233478889999998887
Q ss_pred CC--CHHHHHHHhhhhcCeEEEecc
Q 014742 298 RG--DVRYLMEDIQELKPTMFSGVP 320 (419)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~l~~~P 320 (419)
+. ..+.+...+++.++..+...+
T Consensus 97 ~~~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 97 DPGMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CCCccHHHHHHHHHhcCCCEEEecc
Confidence 64 788888899999999988865
No 146
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=69.52 E-value=30 Score=34.27 Aligned_cols=123 Identities=15% Similarity=0.088 Sum_probs=81.1
Q ss_pred CCCCCcee-eeeccCCCCCce--eEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcC--CchhHHHHHHHHHHcCCeEE
Q 014742 56 IPNNQMLG-GRKVSDGKVGPY--VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGS--NCPEWIIAMEACNSQAITYV 130 (419)
Q Consensus 56 ~pd~~ai~-~~~~~~~~~~~~--~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~--n~~~~~~~~lA~~~~G~~~v 130 (419)
.||..+-+ |- .|.++.. -++|-.++.+.++.++..+ |+...+++++-.| .+.-.+...+|++..|+..|
T Consensus 232 ~pdd~~niQFT---SGTTG~PKgatLsH~~~~Nna~~vg~r~---g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~V 305 (596)
T KOG1177|consen 232 SPDDAVNIQFT---SGTTGAPKGATLSHYNFLNNARAVGARA---GYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIV 305 (596)
T ss_pred CCCCceEEEec---cCCCCCCcceeeehhhhhhhHHHHHHHh---CcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEE
Confidence 35655544 33 3433333 3789999999988877665 7666445544433 33445677899999999999
Q ss_pred eeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCc---cCCCCccEEEEecCCC
Q 014742 131 PLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLP---RCCLYLKTIVSFANVS 184 (419)
Q Consensus 131 pl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 184 (419)
.-.|.+.+..+-+.++..+|..++....-+-.++..-. -....++.++..+..-
T Consensus 306 fp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~~s~lr~~vigGa~~ 362 (596)
T KOG1177|consen 306 FPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVDLSSLRKGVIGGAPV 362 (596)
T ss_pred eeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCchhhhhhheeCCCCC
Confidence 99999999999999999999999988654333332211 1223455555555443
No 147
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=68.89 E-value=61 Score=33.89 Aligned_cols=97 Identities=11% Similarity=0.109 Sum_probs=73.0
Q ss_pred CCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeC
Q 014742 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (419)
Q Consensus 219 ~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~ 298 (419)
++.++++.... .| ....+|+..+...+..+...+.. .++.++|++...+|-.- -....+++++..|+..+...
T Consensus 98 ~~~~Al~~~~~--~~--~~~~~Ty~eL~~~v~~lA~~L~~--~Gv~~gd~V~i~~~n~~-e~v~~~lA~~~~Gav~v~l~ 170 (655)
T PRK03584 98 DDRPAIIFRGE--DG--PRRELSWAELRRQVAALAAALRA--LGVGPGDRVAAYLPNIP-ETVVAMLATASLGAIWSSCS 170 (655)
T ss_pred CCCeEEEEECC--CC--ceEEEeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCcEEEeeC
Confidence 56677665432 12 13579999999999988887743 37888999999988643 23445788999999988876
Q ss_pred C--CHHHHHHHhhhhcCeEEEecchH
Q 014742 299 G--DVRYLMEDIQELKPTMFSGVPRV 322 (419)
Q Consensus 299 ~--~~~~~~~~i~~~~~t~l~~~P~~ 322 (419)
. ..+.+...++..++.++++....
T Consensus 171 ~~~~~~~l~~~l~~~~~~~li~~~~~ 196 (655)
T PRK03584 171 PDFGVQGVLDRFGQIEPKVLIAVDGY 196 (655)
T ss_pred CCCCHHHHHHHHHHcCCcEEEEcccc
Confidence 5 78889999999999999887653
No 148
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=68.67 E-value=74 Score=32.53 Aligned_cols=122 Identities=10% Similarity=-0.071 Sum_probs=78.5
Q ss_pred CCCCceeeeeccCCCCCcee--EeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchh--HHHHHHHHHHcCCeEEee
Q 014742 57 PNNQMLGGRKVSDGKVGPYV--WLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE--WIIAMEACNSQAITYVPL 132 (419)
Q Consensus 57 pd~~ai~~~~~~~~~~~~~~--~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~vpl 132 (419)
++.++++... .|.++..+ .+|+..+...+... ....+++++|++....+.... ....+++.+..|+..+..
T Consensus 204 ~~~~a~i~~T--SGTTG~PKgV~~s~~~l~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~ 278 (570)
T PRK04319 204 REDGAILHYT--SGSTGKPKGVLHVHNAMLQHYQTG---KYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVID 278 (570)
T ss_pred CCCCEEEEeC--CCCCCCCCEEEEecHHHHHHHHHH---HHhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEE
Confidence 4566665431 44444433 46777776544332 334578889987766654432 244577888899988887
Q ss_pred ccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCc-----cCCCCccEEEEecCC
Q 014742 133 YDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLP-----RCCLYLKTIVSFANV 183 (419)
Q Consensus 133 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 183 (419)
....+++.+...+++.++.+++.....+..+.+... .....++.++..++.
T Consensus 279 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~ 334 (570)
T PRK04319 279 GGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSVGEP 334 (570)
T ss_pred CCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEcccC
Confidence 778889999999999999999988876665544321 122355666555543
No 149
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=68.62 E-value=72 Score=31.63 Aligned_cols=121 Identities=12% Similarity=0.015 Sum_probs=76.8
Q ss_pred CCCCceeeeeccCCCCCcee--EeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchh-HHHHHHHHHHcCCeEEeec
Q 014742 57 PNNQMLGGRKVSDGKVGPYV--WLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE-WIIAMEACNSQAITYVPLY 133 (419)
Q Consensus 57 pd~~ai~~~~~~~~~~~~~~--~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~vpl~ 133 (419)
+++++++... .|.++..+ .+|+..+...+.... ...+++++|++...+|-.-. .+..+++.+..|+..+..+
T Consensus 140 ~~~~a~i~~T--SGtTG~PK~v~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~ 214 (483)
T PRK03640 140 LDEVATIMYT--SGTTGKPKGVIQTYGNHWWSAVGSA---LNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE 214 (483)
T ss_pred CCCeEEEEeC--CCcCCCCcEEEEecHHHHHHHHHHH---HhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC
Confidence 4555554331 44444433 578887765443322 33588999999998874322 2334567777888877665
Q ss_pred cCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCc--cCCCCccEEEEecCC
Q 014742 134 DTLGANAVEFIINHAEVSIAFVQENKIPSILSCLP--RCCLYLKTIVSFANV 183 (419)
Q Consensus 134 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 183 (419)
..+..++...+++.++..+.........+..... .....++.++..+..
T Consensus 215 -~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~lr~~~~~g~~ 265 (483)
T PRK03640 215 -KFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEGTYPSSFRCMLLGGGP 265 (483)
T ss_pred -CCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCccccCCcceEEEEcCCC
Confidence 5788999999999999999998876665554332 122355555554443
No 150
>PLN02736 long-chain acyl-CoA synthetase
Probab=68.61 E-value=84 Score=32.87 Aligned_cols=88 Identities=7% Similarity=-0.059 Sum_probs=68.8
Q ss_pred EEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeE
Q 014742 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (419)
Q Consensus 238 V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~ 315 (419)
..+|++.+...+..+...+.. .++.++|++...++-.-- .....++++..|+.++.... .++.+...++..++..
T Consensus 77 ~~lTy~el~~~v~~lA~~L~~--~Gv~~gd~Vai~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~ 153 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGLVQ--HGIPKGACVGLYFINRPE-WLIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAA 153 (651)
T ss_pred EEEEHHHHHHHHHHHHHHHHH--hCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCE
Confidence 458999999999888886643 378889999887766433 22346788999999887654 8899999999999999
Q ss_pred EEecchHHHHHHH
Q 014742 316 FSGVPRVYDRIYT 328 (419)
Q Consensus 316 l~~~P~~~~~l~~ 328 (419)
+++.+..+..+.+
T Consensus 154 l~~~~~~~~~~~~ 166 (651)
T PLN02736 154 IFCVPQTLNTLLS 166 (651)
T ss_pred EEECHHHHHHHHH
Confidence 9999887766544
No 151
>PRK08316 acyl-CoA synthetase; Validated
Probab=68.25 E-value=71 Score=31.98 Aligned_cols=88 Identities=11% Similarity=-0.062 Sum_probs=69.6
Q ss_pred EEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeE
Q 014742 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (419)
Q Consensus 238 V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~ 315 (419)
..+|+..+...+..+...+... ++.++|++....+-... .+..+++++..|...+..+. ..+.+...+++.++..
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~~~--gi~~~~~V~l~~~~~~~-~~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ 111 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALLDL--GLKKGDRVAALGHNSDA-YALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARA 111 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHHHc--CCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCE
Confidence 5689999999988888876443 67788988887766443 34457889999988887765 8888999999999999
Q ss_pred EEecchHHHHHHH
Q 014742 316 FSGVPRVYDRIYT 328 (419)
Q Consensus 316 l~~~P~~~~~l~~ 328 (419)
++........+.+
T Consensus 112 ii~~~~~~~~~~~ 124 (523)
T PRK08316 112 FLVDPALAPTAEA 124 (523)
T ss_pred EEEccchHHHHHH
Confidence 9999888776644
No 152
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=68.23 E-value=58 Score=33.82 Aligned_cols=99 Identities=13% Similarity=0.157 Sum_probs=74.6
Q ss_pred CCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEe
Q 014742 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (419)
Q Consensus 218 ~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~ 297 (419)
.++.++++.... .+| ....+|+..+...+..+...+.. .++.++|++...+|-.-- ....+++++..|+..+..
T Consensus 70 ~p~~~Al~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L~~--~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~Gav~v~i 143 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPG--EVRKITYRELHREVCRFANVLKS--LGVKKGDRVAIYMPMIPE-AAIAMLACARIGAIHSVV 143 (625)
T ss_pred CCCCeEEEEEcC-CCC--ceEEEEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCHH-HHHHHHHHHHhCCEEecc
Confidence 467777765332 122 24579999999999888887643 478899999999876533 344578889999998877
Q ss_pred CC--CHHHHHHHhhhhcCeEEEecchH
Q 014742 298 RG--DVRYLMEDIQELKPTMFSGVPRV 322 (419)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~l~~~P~~ 322 (419)
.. .++.+...++..++.++++....
T Consensus 144 ~~~~~~~~l~~~l~~~~~~~li~~~~~ 170 (625)
T TIGR02188 144 FGGFSAEALADRINDAGAKLVITADEG 170 (625)
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEcCcc
Confidence 54 88999999999999999987654
No 153
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=67.80 E-value=68 Score=33.38 Aligned_cols=99 Identities=11% Similarity=0.120 Sum_probs=74.0
Q ss_pred CCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEe
Q 014742 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (419)
Q Consensus 218 ~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~ 297 (419)
.++.++++..... ......+|++.+...+..+...+.. .++.++|++...++-.-- .+..+++++..|+..+..
T Consensus 80 ~p~~~Al~~~~~~---~~~~~~lTy~eL~~~v~~lA~~L~~--~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~Gav~v~l 153 (637)
T PRK00174 80 RGDKVAIIWEGDD---PGDSRKITYRELHREVCRFANALKS--LGVKKGDRVAIYMPMIPE-AAVAMLACARIGAVHSVV 153 (637)
T ss_pred CCCCeEEEEECCC---CCceEEEEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEEec
Confidence 4677777653211 1134679999999999998887643 367889999988776533 334478899999998887
Q ss_pred CC--CHHHHHHHhhhhcCeEEEecchH
Q 014742 298 RG--DVRYLMEDIQELKPTMFSGVPRV 322 (419)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~l~~~P~~ 322 (419)
.. .++.+...++..++..+++....
T Consensus 154 ~~~~~~~~l~~~l~~~~~~~li~~~~~ 180 (637)
T PRK00174 154 FGGFSAEALADRIIDAGAKLVITADEG 180 (637)
T ss_pred CCCCCHHHHHHHHHhcCCcEEEEcCcc
Confidence 65 88999999999999999987654
No 154
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=67.67 E-value=74 Score=32.47 Aligned_cols=92 Identities=13% Similarity=0.122 Sum_probs=75.1
Q ss_pred eEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCe
Q 014742 237 GVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPT 314 (419)
Q Consensus 237 ~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t 314 (419)
|..+|+..+...+..++..+.....+...+|++....|-.--+. ...++++..|+.+.-... +...+...++.-++.
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~-~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~k 121 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFV-ELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPK 121 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCccccccCcccCHHHHHHHHHhcCCe
Confidence 78999999999999999988554445788999999988764432 236678888888876644 999999999999999
Q ss_pred EEEecchHHHHHHHH
Q 014742 315 MFSGVPRVYDRIYTG 329 (419)
Q Consensus 315 ~l~~~P~~~~~l~~~ 329 (419)
++++....+..+.+.
T Consensus 122 iif~d~~~~~~i~~~ 136 (537)
T KOG1176|consen 122 LIFVDEDFYDKISEA 136 (537)
T ss_pred EEEEcCchHHHHHHH
Confidence 999999999988654
No 155
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=67.61 E-value=55 Score=31.48 Aligned_cols=123 Identities=15% Similarity=0.132 Sum_probs=83.6
Q ss_pred CCCCCceeeeeccCCCCCce--eEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchh-HHHHHHHHHHcCCeEEee
Q 014742 56 IPNNQMLGGRKVSDGKVGPY--VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE-WIIAMEACNSQAITYVPL 132 (419)
Q Consensus 56 ~pd~~ai~~~~~~~~~~~~~--~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~vpl 132 (419)
.++.++++... .|.++.. ..+|+..+...+..+.. ..+++++|++....+-... .+..+++.+..|+..+..
T Consensus 118 ~~~~~~~i~~T--SGTtG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~ 192 (408)
T TIGR01733 118 GPDDLAYVIYT--SGSTGRPKGVVVTHRSLVNLLAWLAR---RYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVP 192 (408)
T ss_pred CCCCcEEEEEc--CCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEc
Confidence 35666665431 3333332 34688888777766655 4467789999888875544 345577888888888776
Q ss_pred ccCCC--hhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEecCC
Q 014742 133 YDTLG--ANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANV 183 (419)
Q Consensus 133 ~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (419)
+.... .+.+..+++..++..++.....+..+.+........++.++.....
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~v~~~g~~ 245 (408)
T TIGR01733 193 PEDEERDAALLAALIAEHPVTVLNLTPSLLALLAAALPPALASLRLVILGGEA 245 (408)
T ss_pred ChhhccCHHHHHHHHHHcCceEEEeCHHHHHHHHHhhhhcccCceEEEEeCcc
Confidence 66554 6788999999999999999887776665543344566776665554
No 156
>PLN02654 acetate-CoA ligase
Probab=67.13 E-value=65 Score=33.88 Aligned_cols=100 Identities=16% Similarity=0.156 Sum_probs=74.0
Q ss_pred CCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEe
Q 014742 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (419)
Q Consensus 218 ~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~ 297 (419)
.++.++++..... .| ....+|+..|...+..+...+.. .++.++|++...+|-.-- .+..+++++..|+..+..
T Consensus 102 ~~~~~Al~~~~~~-~~--~~~~~Ty~eL~~~v~~lA~~L~~--~Gv~~GdrV~i~~pn~~e-~v~a~lA~~~~Gav~vpv 175 (666)
T PLN02654 102 NGDKIAIYWEGNE-PG--FDASLTYSELLDRVCQLANYLKD--VGVKKGDAVVIYLPMLME-LPIAMLACARIGAVHSVV 175 (666)
T ss_pred CCCCEEEEEEcCC-CC--ceEEEeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEEec
Confidence 3566676542221 11 23579999999999998887643 378899999999887533 334478899999998877
Q ss_pred CC--CHHHHHHHhhhhcCeEEEecchHH
Q 014742 298 RG--DVRYLMEDIQELKPTMFSGVPRVY 323 (419)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~l~~~P~~~ 323 (419)
.. .++.+...++..++.++++...+.
T Consensus 176 ~~~~~~~~l~~~l~~~~~~~li~~~~~~ 203 (666)
T PLN02654 176 FAGFSAESLAQRIVDCKPKVVITCNAVK 203 (666)
T ss_pred CCCCCHHHHHHHHHhcCceEEEEcCccc
Confidence 54 889999999999999999876643
No 157
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=67.01 E-value=47 Score=30.62 Aligned_cols=90 Identities=12% Similarity=0.144 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCC----ChhHHHHHHhhcCceEEEEeCCCh
Q 014742 85 DAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTL----GANAVEFIINHAEVSIAFVQENKI 160 (419)
Q Consensus 85 ~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~----~~~~l~~~l~~~~~~~vi~~~~~~ 160 (419)
.|+..+|+.|++. |-.|.+++.+....+.. .+...|..+..++... ..+++...++..++++||+|....
T Consensus 18 ~Rcl~LA~~l~~~----g~~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~vV~D~y~~ 91 (279)
T TIGR03590 18 MRCLTLARALHAQ----GAEVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEEKFDILIVDHYGL 91 (279)
T ss_pred HHHHHHHHHHHHC----CCEEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCCEEEEcCCCC
Confidence 4677889999765 45777777776665433 3467888777775432 345788899999999999998644
Q ss_pred hh-HhhcCccCCCCccEEEEecCC
Q 014742 161 PS-ILSCLPRCCLYLKTIVSFANV 183 (419)
Q Consensus 161 ~~-~~~~~~~~~~~~~~~~~~~~~ 183 (419)
+. ..+... ...+.+++++|.
T Consensus 92 ~~~~~~~~k---~~~~~l~~iDD~ 112 (279)
T TIGR03590 92 DADWEKLIK---EFGRKILVIDDL 112 (279)
T ss_pred CHHHHHHHH---HhCCeEEEEecC
Confidence 32 222221 234467777765
No 158
>PRK07788 acyl-CoA synthetase; Validated
Probab=66.20 E-value=41 Score=34.20 Aligned_cols=85 Identities=9% Similarity=-0.112 Sum_probs=67.7
Q ss_pred EeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEE
Q 014742 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (419)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l 316 (419)
.+|+..+...+..+...+.. .++.++|++...++-. ......+++++..|+.++..+. ..+.+...+++.++..+
T Consensus 74 ~~Ty~el~~~~~~la~~L~~--~gi~~gd~V~i~~~n~-~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 150 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLA--LGVRAGDGVAVLARNH-RGFVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKAL 150 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCC-HHHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEE
Confidence 58999999998888887643 3677889998876554 2233347889999999998876 88899999999999999
Q ss_pred EecchHHHHH
Q 014742 317 SGVPRVYDRI 326 (419)
Q Consensus 317 ~~~P~~~~~l 326 (419)
+..+.+...+
T Consensus 151 i~~~~~~~~~ 160 (549)
T PRK07788 151 VYDDEFTDLL 160 (549)
T ss_pred EECchhHHHH
Confidence 9988776655
No 159
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=64.32 E-value=83 Score=31.44 Aligned_cols=86 Identities=9% Similarity=-0.030 Sum_probs=67.2
Q ss_pred EeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEE
Q 014742 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (419)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l 316 (419)
.+|++++...+..+...+.. .+...++++...++-... ....+++++..|+..+..+. ..+.+...+++.++..+
T Consensus 25 ~~ty~~l~~~v~~~a~~l~~--~g~~~~~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~ 101 (515)
T TIGR03098 25 TLTYAALSERVLALASGLRG--LGLARGERVAIYLDKRLE-TVTAMFGAALAGGVFVPINPLLKAEQVAHILADCNVRLL 101 (515)
T ss_pred eeeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCHH-HHHHHHHHHhcCEEEEeCCCCCCHHHHHHHHHcCCCeEE
Confidence 68999999988888877643 367788888887766433 34457788999998887765 88999999999999999
Q ss_pred EecchHHHHHH
Q 014742 317 SGVPRVYDRIY 327 (419)
Q Consensus 317 ~~~P~~~~~l~ 327 (419)
++.+..+..+.
T Consensus 102 i~~~~~~~~~~ 112 (515)
T TIGR03098 102 VTSSERLDLLH 112 (515)
T ss_pred EEccchhhhhH
Confidence 99887665543
No 160
>PRK05857 acyl-CoA synthetase; Validated
Probab=63.97 E-value=62 Score=32.86 Aligned_cols=96 Identities=15% Similarity=0.075 Sum_probs=71.5
Q ss_pred CCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEe
Q 014742 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (419)
Q Consensus 218 ~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~ 297 (419)
.++.++++.. .| ...+|+..+...+..+...+.. .++.+++++...++-... .+..+++++..|+..+..
T Consensus 27 ~p~~~a~~~~-~~------~~~~Ty~el~~~~~~~a~~L~~--~g~~~g~~V~i~~~~~~e-~~~~~lA~~~~G~v~v~l 96 (540)
T PRK05857 27 QPEAIALRRC-DG------TSALRYRELVAEVGGLAADLRA--QSVSRGSRVLVISDNGPE-TYLSVLACAKLGAIAVMA 96 (540)
T ss_pred CCCcEEEeec-CC------CceeeHHHHHHHHHHHHHHHHH--hCcCCCCEEEEEcCCCHH-HHHHHHHHHHcCeEEEec
Confidence 4566666432 22 1468999999999888886643 367788999888766543 344578899999999987
Q ss_pred CC--CHHHHHHHhhhhcCeEEEecchHH
Q 014742 298 RG--DVRYLMEDIQELKPTMFSGVPRVY 323 (419)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~l~~~P~~~ 323 (419)
+. ..+.+.+.++..++..++..+...
T Consensus 97 ~~~~~~~~l~~~~~~~~~~~ii~~~~~~ 124 (540)
T PRK05857 97 DGNLPIAAIERFCQITDPAAALVAPGSK 124 (540)
T ss_pred CccCCHHHHHHHHHhcCCceEEEeccch
Confidence 65 888888999999999988887653
No 161
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=63.81 E-value=73 Score=32.34 Aligned_cols=99 Identities=12% Similarity=0.020 Sum_probs=72.3
Q ss_pred CCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEe
Q 014742 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (419)
Q Consensus 218 ~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~ 297 (419)
.++.++++..- ++.++...+|+..+...+..+...+.. .++.++|++...++-..-+ ...+++++..|+..+..
T Consensus 37 ~p~~~A~~~~~---~~~~~~~~~Ty~el~~~~~~~a~~L~~--~g~~~g~~Val~~~n~~e~-~~~~la~~~~G~~~vpl 110 (547)
T PRK13295 37 CPDKTAVTAVR---LGTGAPRRFTYRELAALVDRVAVGLAR--LGVGRGDVVSCQLPNWWEF-TVLYLACSRIGAVLNPL 110 (547)
T ss_pred CCCceEEEecC---CCccccceeeHHHHHHHHHHHHHHHHH--hCCCCCCEEEEECCCChHH-HHHHHHHHhcCcEEecc
Confidence 35666665432 223344579999999988888886643 3778899998887765432 34577889999998876
Q ss_pred CC--CHHHHHHHhhhhcCeEEEecchH
Q 014742 298 RG--DVRYLMEDIQELKPTMFSGVPRV 322 (419)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~l~~~P~~ 322 (419)
+. ..+.+...++..++..+.+...+
T Consensus 111 ~~~~~~~~l~~~l~~~~~~~li~~~~~ 137 (547)
T PRK13295 111 MPIFRERELSFMLKHAESKVLVVPKTF 137 (547)
T ss_pred ccccCHHHHHHHHHhcCceEEEEeccc
Confidence 54 78889999999999999887653
No 162
>PRK13388 acyl-CoA synthetase; Provisional
Probab=63.80 E-value=78 Score=32.16 Aligned_cols=85 Identities=9% Similarity=-0.069 Sum_probs=65.4
Q ss_pred EeechhHHHHhhhhhhhhhhcCccC-CCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeE
Q 014742 239 VLTNQAIVAEVLSVDQMFVVTGKVC-SEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (419)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~-~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~ 315 (419)
.+|+..+...+..+...+... +. .++|++...++-..- ....+++++..|+..+..+. ..+.+...+.+.++..
T Consensus 26 ~lTy~el~~~~~~la~~L~~~--g~~~~~~~V~i~~~n~~~-~v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~ 102 (540)
T PRK13388 26 TWTWREVLAEAAARAAALIAL--ADPDRPLHVGVLLGNTPE-MLFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQL 102 (540)
T ss_pred eeeHHHHHHHHHHHHHHHHHh--cCCCCCCEEEEECCCCcH-HHHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCE
Confidence 789999999998888766432 55 577888877775433 23347788999999987765 7888999999999999
Q ss_pred EEecchHHHHH
Q 014742 316 FSGVPRVYDRI 326 (419)
Q Consensus 316 l~~~P~~~~~l 326 (419)
+++.......+
T Consensus 103 ~i~~~~~~~~~ 113 (540)
T PRK13388 103 LVTDAEHRPLL 113 (540)
T ss_pred EEEChhhhHHH
Confidence 99877665544
No 163
>PRK07529 AMP-binding domain protein; Validated
Probab=63.32 E-value=59 Score=33.89 Aligned_cols=99 Identities=8% Similarity=-0.025 Sum_probs=70.0
Q ss_pred CCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEe
Q 014742 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (419)
Q Consensus 218 ~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~ 297 (419)
.++.++++....+.. ..+...+|++.+...+..+...+.. .++.++|++...+|-..- .+..+++++..|. ++..
T Consensus 38 ~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~--~Gi~~gd~V~i~~~n~~e-~~~~~lA~~~~Gi-~~pi 112 (632)
T PRK07529 38 HPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHS--LGVGPGDVVAFLLPNLPE-THFALWGGEAAGI-ANPI 112 (632)
T ss_pred CCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCHH-HHHHHHHHHHhCE-EEeC
Confidence 456777766533221 1235679999999999988887743 377889999998886543 2334677787784 3333
Q ss_pred C-C-CHHHHHHHhhhhcCeEEEecch
Q 014742 298 R-G-DVRYLMEDIQELKPTMFSGVPR 321 (419)
Q Consensus 298 ~-~-~~~~~~~~i~~~~~t~l~~~P~ 321 (419)
. . .++.+...+++.++..+++...
T Consensus 113 ~~~~~~~~i~~~l~~~~~~~li~~~~ 138 (632)
T PRK07529 113 NPLLEPEQIAELLRAAGAKVLVTLGP 138 (632)
T ss_pred CCcCCHHHHHHHHHhcCCcEEEEeCC
Confidence 3 3 8899999999999999998643
No 164
>PLN03051 acyl-activating enzyme; Provisional
Probab=63.24 E-value=69 Score=32.15 Aligned_cols=122 Identities=10% Similarity=-0.129 Sum_probs=74.8
Q ss_pred CCCCceeeeeccCCCCCcee--EeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchh-HHHHHHHHHHcCCeEEeec
Q 014742 57 PNNQMLGGRKVSDGKVGPYV--WLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE-WIIAMEACNSQAITYVPLY 133 (419)
Q Consensus 57 pd~~ai~~~~~~~~~~~~~~--~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~vpl~ 133 (419)
++.++++..- .|.++..+ .+|...+...+... ....++.++|++....|-... .+..+++++..|+..+...
T Consensus 118 ~~d~a~i~yT--SGTTG~PKgV~~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~ 192 (499)
T PLN03051 118 VESVTNILFS--SGTTGEPKAIPWTHLSPLRCASDG---WAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYG 192 (499)
T ss_pred ccceEEEEeC--CCCCCCCceEEEccchHHHHHHHH---HHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecC
Confidence 3556655431 34444333 46777665543322 234578889998776663321 1235678888999888776
Q ss_pred cCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCc-----cCCCCccEEEEecCC
Q 014742 134 DTLGANAVEFIINHAEVSIAFVQENKIPSILSCLP-----RCCLYLKTIVSFANV 183 (419)
Q Consensus 134 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 183 (419)
.....+.+...+++.++.++......+..+.+... .....++.++...+.
T Consensus 193 ~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~~~~~~~~Lr~i~~gG~~ 247 (499)
T PLN03051 193 GAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAMEGLDWSKLRVFASTGEA 247 (499)
T ss_pred CCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCccccccCCchhheEEEecCCC
Confidence 55667889999999999999988776665543211 122345555554443
No 165
>PRK07798 acyl-CoA synthetase; Validated
Probab=62.30 E-value=1e+02 Score=30.91 Aligned_cols=88 Identities=6% Similarity=-0.166 Sum_probs=66.5
Q ss_pred EEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeE
Q 014742 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (419)
Q Consensus 238 V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~ 315 (419)
-.+|+..+...+..+...+.. .++.++|++...++-.-. .+...++++..|+..+..+. ..+.+...+++.++..
T Consensus 27 ~~~ty~el~~~~~~la~~L~~--~g~~~~~~v~v~~~n~~~-~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 103 (533)
T PRK07798 27 RRLTYAELEERANRLAHYLIA--QGLGPGDHVGIYARNRIE-YVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVA 103 (533)
T ss_pred ceeeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCHH-HHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCE
Confidence 469999999988888887643 367778888877654322 23347788999999887765 7888999999999999
Q ss_pred EEecchHHHHHHH
Q 014742 316 FSGVPRVYDRIYT 328 (419)
Q Consensus 316 l~~~P~~~~~l~~ 328 (419)
++........+.+
T Consensus 104 ~~~~~~~~~~~~~ 116 (533)
T PRK07798 104 LVYEREFAPRVAE 116 (533)
T ss_pred EEEchhhHHHHHH
Confidence 9988776655543
No 166
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=61.51 E-value=1.1e+02 Score=31.83 Aligned_cols=98 Identities=14% Similarity=0.202 Sum_probs=72.9
Q ss_pred CCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEe
Q 014742 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (419)
Q Consensus 218 ~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~ 297 (419)
.++.++++... ..+|. .-.+|+..+...+..+...+.. .++.++|++...+|-.-- .+..+++++..|+..+..
T Consensus 65 ~p~~~Al~~~~-~~~~~--~~~~Ty~eL~~~v~~lA~~L~~--~Gv~~Gd~V~i~~~n~~e-~v~~~lA~~~~Gav~vpl 138 (628)
T TIGR02316 65 RGEQLALVTVS-SETGQ--ERTLTYRQLHREVNVFASALRA--LGVGRGDRVLIYMPMIAE-AVFAMLACARIGAIHSVV 138 (628)
T ss_pred CCCCeEEEEEc-CCCCc--eEEEeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCHH-HHHHHHHHHHhCCEEEec
Confidence 35667765432 22222 2468999999999998887743 378899999999887533 344578899999998777
Q ss_pred CC--CHHHHHHHhhhhcCeEEEecch
Q 014742 298 RG--DVRYLMEDIQELKPTMFSGVPR 321 (419)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~l~~~P~ 321 (419)
.. ....+...|+..++.++++...
T Consensus 139 ~~~~~~~~l~~~l~~~~~~~li~~~~ 164 (628)
T TIGR02316 139 FGGFASHSLALRIDDATPKLIVSADA 164 (628)
T ss_pred CCCCCHHHHHHHHHhcCceEEEECCc
Confidence 54 8889999999999999988654
No 167
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=61.40 E-value=98 Score=32.43 Aligned_cols=96 Identities=15% Similarity=0.117 Sum_probs=72.3
Q ss_pred CceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC
Q 014742 220 TNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG 299 (419)
Q Consensus 220 ~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~ 299 (419)
++++++.... +|. ...+|++.+...+..+...+.. .++.++|++...+|-.-- ....+++++..|+..+....
T Consensus 99 ~~~a~~~~~~--~~~--~~~~Ty~eL~~~v~~lA~~L~~--~Gv~~GdrV~i~~~n~~e-~~~~~lA~~~~Gav~vp~~~ 171 (652)
T TIGR01217 99 TEPALLYVDE--THE--PAPVTWAELRRQVASLAAALRA--LGVRPGDRVSGYLPNIPQ-AVVAMLATASVGAIWSSCSP 171 (652)
T ss_pred CCeEEEEECC--CCC--eeEEeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCHH-HHHHHHHHHHhCeEEEecCC
Confidence 5666655432 222 3569999999999998887743 378899999999887533 34457788999988887754
Q ss_pred --CHHHHHHHhhhhcCeEEEecchH
Q 014742 300 --DVRYLMEDIQELKPTMFSGVPRV 322 (419)
Q Consensus 300 --~~~~~~~~i~~~~~t~l~~~P~~ 322 (419)
.++.+...+++.++..+++....
T Consensus 172 ~~~~~~l~~~l~~~~~k~li~~~~~ 196 (652)
T TIGR01217 172 DFGARGVLDRFQQIEPKLLFTVDGY 196 (652)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcccc
Confidence 88999999999999999886643
No 168
>PLN02565 cysteine synthase
Probab=61.36 E-value=84 Score=29.71 Aligned_cols=72 Identities=8% Similarity=0.043 Sum_probs=53.0
Q ss_pred HHHHHHHHHhCCC-CCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCC
Q 014742 87 AIRFGSAMRSRGV-NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (419)
Q Consensus 87 ~~~la~~L~~~g~-~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (419)
+..+-..+.+.|. .+|....+....+---+...++|..+|+.++..-|..........++..++++++++..
T Consensus 50 A~~~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 122 (322)
T PLN02565 50 GYSMITDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDPA 122 (322)
T ss_pred HHHHHHHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCCC
Confidence 3334444555564 78866555555555566667788889998888778778888899999999999999864
No 169
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=61.04 E-value=1.1e+02 Score=30.58 Aligned_cols=103 Identities=10% Similarity=-0.043 Sum_probs=73.8
Q ss_pred CCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEe
Q 014742 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (419)
Q Consensus 218 ~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~ 297 (419)
.++.++++.... .|. .-.+|+..+...+..+...+.. .++..+|++....+-...+ ...+++++..|+..+..
T Consensus 20 ~p~~~a~~~~~~--~~~--~~~~ty~~l~~~v~~la~~L~~--~g~~~~~~v~i~~~n~~~~-~~~~la~~~~G~~~v~l 92 (517)
T PRK08008 20 YGHKTALIFESS--GGV--VRRYSYLELNEEINRTANLFYS--LGIRKGDKVALHLDNCPEF-IFCWFGLAKIGAIMVPI 92 (517)
T ss_pred CCCceEEEcccC--CCc--cceeeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCeEEEEc
Confidence 456667654321 111 1357999998888888776643 3677889998887665432 33477889999988877
Q ss_pred CC--CHHHHHHHhhhhcCeEEEecchHHHHHH
Q 014742 298 RG--DVRYLMEDIQELKPTMFSGVPRVYDRIY 327 (419)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~l~~~P~~~~~l~ 327 (419)
+. .++.+...+++.++..++..+.....+.
T Consensus 93 ~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~ 124 (517)
T PRK08008 93 NARLLREESAWILQNSQASLLVTSAQFYPMYR 124 (517)
T ss_pred CcccCHHHHHHHHHhcCceEEEEecchhHHHH
Confidence 54 8899999999999999999887665443
No 170
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=60.69 E-value=85 Score=31.90 Aligned_cols=123 Identities=13% Similarity=-0.028 Sum_probs=79.4
Q ss_pred CCCCCceeeeeccCCCCCcee--EeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCc--hhHHHHHHHHHHcCCeEEe
Q 014742 56 IPNNQMLGGRKVSDGKVGPYV--WLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNC--PEWIIAMEACNSQAITYVP 131 (419)
Q Consensus 56 ~pd~~ai~~~~~~~~~~~~~~--~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~--~~~~~~~lA~~~~G~~~vp 131 (419)
.|+.++++..- .|.++..+ .+|+..+...+.... ...++.++|++..++|-. ..+....+..+..|+..+.
T Consensus 181 ~~~d~a~i~~T--SGTTG~PKgV~~th~~l~~~~~~~~---~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~ 255 (539)
T PRK06334 181 DPEDVAVILFT--SGTEKLPKGVPLTHANLLANQRACL---KFFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVF 255 (539)
T ss_pred CcCCEEEEEEC--CCCCCCCCEEEEcHHHHHHHHHHHH---HhcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEE
Confidence 45677766441 34444433 578888876554433 335778899988887743 2233345677788888776
Q ss_pred eccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCc---cCCCCccEEEEecCC
Q 014742 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLP---RCCLYLKTIVSFANV 183 (419)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 183 (419)
....+..+.+...+++.++..++.....+..+.+... .....++.++..++.
T Consensus 256 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~ 310 (539)
T PRK06334 256 AYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIGGDA 310 (539)
T ss_pred ecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEECCcc
Confidence 6556788899999999999999988877665544321 123456666655543
No 171
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=59.87 E-value=93 Score=32.07 Aligned_cols=98 Identities=4% Similarity=-0.059 Sum_probs=73.2
Q ss_pred CCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEe
Q 014742 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (419)
Q Consensus 218 ~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~ 297 (419)
.++.++++.- .-.+|+.++...+..+...+.. .++.++|++...++-..- .+..+++++..|+..+..
T Consensus 50 ~p~~~Ai~~~---------~~~~Ty~eL~~~~~~la~~L~~--~g~~~gd~V~i~~~n~~~-~v~~~lA~~~~G~~~v~l 117 (600)
T PRK08279 50 HPDRPALLFE---------DQSISYAELNARANRYAHWAAA--RGVGKGDVVALLMENRPE-YLAAWLGLAKLGAVVALL 117 (600)
T ss_pred CCCCcEEEeC---------CCcccHHHHHHHHHHHHHHHHh--cCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEeec
Confidence 3566666541 1358999999988888776633 367788999888766533 234578889999998877
Q ss_pred CC--CHHHHHHHhhhhcCeEEEecchHHHHHH
Q 014742 298 RG--DVRYLMEDIQELKPTMFSGVPRVYDRIY 327 (419)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~l~~~P~~~~~l~ 327 (419)
+. ..+.+...+++.++..+++.......+.
T Consensus 118 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~ 149 (600)
T PRK08279 118 NTQQRGAVLAHSLNLVDAKHLIVGEELVEAFE 149 (600)
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEChHHHHHHH
Confidence 65 7788899999999999999887766553
No 172
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=59.82 E-value=70 Score=32.53 Aligned_cols=86 Identities=6% Similarity=-0.086 Sum_probs=68.8
Q ss_pred EeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEE
Q 014742 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (419)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l 316 (419)
.+|...+...+..+...+.. .++.+++++....+-...+ +..+++++..|+..+..+. ..+.+...+++.+++.+
T Consensus 46 ~~Ty~el~~~v~~la~~L~~--~gi~~g~~V~v~~~n~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l 122 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAA--AGVKRGDRVALMCGNRIEF-LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLL 122 (542)
T ss_pred cccHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCChHH-HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEE
Confidence 68999999999888887643 3677888888877665443 4457889999999988765 88999999999999999
Q ss_pred EecchHHHHHH
Q 014742 317 SGVPRVYDRIY 327 (419)
Q Consensus 317 ~~~P~~~~~l~ 327 (419)
++.+.....+.
T Consensus 123 ~~~~~~~~~~~ 133 (542)
T PRK06155 123 VVEAALLAALE 133 (542)
T ss_pred EEChhhHHHHH
Confidence 99887776653
No 173
>PRK07470 acyl-CoA synthetase; Validated
Probab=59.77 E-value=97 Score=31.19 Aligned_cols=86 Identities=7% Similarity=-0.161 Sum_probs=66.2
Q ss_pred EEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeE
Q 014742 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (419)
Q Consensus 238 V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~ 315 (419)
..+|+..+...+..+...+.. .++.+++++....+-... .+..+++++..|+..+..+. ....+...+++.+++.
T Consensus 31 ~~~Ty~el~~~~~~~a~~L~~--~g~~~g~~v~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~ 107 (528)
T PRK07470 31 RSWTWREIDARVDALAAALAA--RGVRKGDRILVHSRNCNQ-MFESMFAAFRLGAVWVPTNFRQTPDEVAYLAEASGARA 107 (528)
T ss_pred ccccHHHHHHHHHHHHHHHHH--hCCCCCCEEEEEcCCCHH-HHHHHHHHHhCCeEEEecCccCCHHHHHHHHHhcCceE
Confidence 368999999988888887644 367788888877665432 22347788999998888765 7889999999999999
Q ss_pred EEecchHHHHH
Q 014742 316 FSGVPRVYDRI 326 (419)
Q Consensus 316 l~~~P~~~~~l 326 (419)
++..+.+...+
T Consensus 108 ~i~~~~~~~~~ 118 (528)
T PRK07470 108 MICHADFPEHA 118 (528)
T ss_pred EEEcchhHHHH
Confidence 99988765543
No 174
>PRK08315 AMP-binding domain protein; Validated
Probab=59.06 E-value=58 Score=33.07 Aligned_cols=102 Identities=16% Similarity=0.128 Sum_probs=69.7
Q ss_pred CCCCceeeeeccCCCCCcee--EeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCC--chhHHHHHHHHHHcCCeEEee
Q 014742 57 PNNQMLGGRKVSDGKVGPYV--WLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSN--CPEWIIAMEACNSQAITYVPL 132 (419)
Q Consensus 57 pd~~ai~~~~~~~~~~~~~~--~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n--~~~~~~~~lA~~~~G~~~vpl 132 (419)
++.++.+... .|.++..+ .+|+..+...+..+... .+++++|++....+- ...++..+++++..|+..+..
T Consensus 198 ~~~~a~i~~T--SGtTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~ 272 (559)
T PRK08315 198 PDDPINIQYT--SGTTGFPKGATLTHRNILNNGYFIGEA---MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYP 272 (559)
T ss_pred CCCcEEEEEc--CCCCCCcceEEeeHHHHHHHHHHHHHh---cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEe
Confidence 4455544331 44444443 56888776655544433 488999999888775 344455678888899888866
Q ss_pred ccCCChhHHHHHHhhcCceEEEEeCCChhhH
Q 014742 133 YDTLGANAVEFIINHAEVSIAFVQENKIPSI 163 (419)
Q Consensus 133 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 163 (419)
....++..+...+++.++..++.....+...
T Consensus 273 ~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~ 303 (559)
T PRK08315 273 GEGFDPLATLAAVEEERCTALYGVPTMFIAE 303 (559)
T ss_pred cCCCCHHHHHHHHHHcCCeEEecchHHHHHH
Confidence 6677888899999999999998876654333
No 175
>PRK12583 acyl-CoA synthetase; Provisional
Probab=58.81 E-value=64 Score=32.77 Aligned_cols=122 Identities=11% Similarity=0.051 Sum_probs=76.7
Q ss_pred CCCCceeeeeccCCCCCce--eEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCC--chhHHHHHHHHHHcCCeEEee
Q 014742 57 PNNQMLGGRKVSDGKVGPY--VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSN--CPEWIIAMEACNSQAITYVPL 132 (419)
Q Consensus 57 pd~~ai~~~~~~~~~~~~~--~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n--~~~~~~~~lA~~~~G~~~vpl 132 (419)
++.++.+... .|.++.. ..+|+..+...+..+... .+++++|++....+- ....+..+++++..|+.++..
T Consensus 200 ~~~~a~i~~T--SGsTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~ 274 (558)
T PRK12583 200 RDDPINIQYT--SGTTGFPKGATLSHHNILNNGYFVAES---LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYP 274 (558)
T ss_pred CCCcEEEEEC--CCCCCCCceEEeeHHHHHHHHHHHHHH---hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEee
Confidence 4555544321 4444443 357888887666655444 378899999877763 344566678888889888755
Q ss_pred ccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCc---cCCCCccEEEEecCC
Q 014742 133 YDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLP---RCCLYLKTIVSFANV 183 (419)
Q Consensus 133 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 183 (419)
........+...+++.++..++.....+........ .....++.++.....
T Consensus 275 ~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~lr~i~~~G~~ 328 (558)
T PRK12583 275 NEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFDLSSLRTGIMAGAP 328 (558)
T ss_pred cCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCCchhheEEEecCCC
Confidence 556778888899999999999887765443332211 112345555554443
No 176
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=58.61 E-value=7.4 Score=24.76 Aligned_cols=26 Identities=23% Similarity=0.284 Sum_probs=22.4
Q ss_pred eEEEEccCCCCHHHHHHHHHhhCCce
Q 014742 386 QAMLSGAAPLPIHVEEFLRVTSGAPL 411 (419)
Q Consensus 386 r~v~~~G~~l~~~~~~~~~~~~~~~v 411 (419)
+++.++|.|++++..+.++.+||-++
T Consensus 22 ~wvSf~GrPltdevK~a~k~i~~~~l 47 (49)
T PF06543_consen 22 KWVSFDGRPLTDEVKEAMKLIFGKRL 47 (49)
T ss_pred HheeeCCeeCCHHHHHHHHHHHhhhc
Confidence 56889999999999999999887553
No 177
>PRK13391 acyl-CoA synthetase; Provisional
Probab=58.09 E-value=1.2e+02 Score=30.29 Aligned_cols=99 Identities=10% Similarity=-0.021 Sum_probs=74.2
Q ss_pred CCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEe
Q 014742 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (419)
Q Consensus 218 ~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~ 297 (419)
.++.++++...+| -.+|...+...+..+...+.. .++.+++++....+-... .+..+++++..|+..+..
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~--~g~~~~~~V~v~~~~~~~-~~~~~~a~~~~G~~~~~l 79 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRS--LGLKRGDHVAIFMENNLR-YLEVCWAAERSGLYYTCV 79 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCHH-HHHHHHHHHHhccEEecc
Confidence 4566676655432 259999999998888887644 267778888877666533 234477889999999887
Q ss_pred CC--CHHHHHHHhhhhcCeEEEecchHHHHH
Q 014742 298 RG--DVRYLMEDIQELKPTMFSGVPRVYDRI 326 (419)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~l~~~P~~~~~l 326 (419)
+. +...+...+++.++..+.+.+.....+
T Consensus 80 ~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 110 (511)
T PRK13391 80 NSHLTPAEAAYIVDDSGARALITSAAKLDVA 110 (511)
T ss_pred ccccCHHHHHHHHhccCCcEEEEchhhHHHH
Confidence 65 889999999999999999988776554
No 178
>PLN02574 4-coumarate--CoA ligase-like
Probab=57.50 E-value=95 Score=31.66 Aligned_cols=100 Identities=12% Similarity=0.130 Sum_probs=72.2
Q ss_pred CCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEe
Q 014742 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (419)
Q Consensus 218 ~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~ 297 (419)
.++.++++- +.+| ..+|+..+...+..+...+... .++.++|++....+-.. -....+++++..|+..+..
T Consensus 52 ~~~~~a~~~---~~~~----~~~Ty~el~~~~~~lA~~L~~~-~G~~~gd~V~i~~~n~~-~~~~~~la~~~~G~v~v~l 122 (560)
T PLN02574 52 HNGDTALID---SSTG----FSISYSELQPLVKSMAAGLYHV-MGVRQGDVVLLLLPNSV-YFPVIFLAVLSLGGIVTTM 122 (560)
T ss_pred cCCCCEEEE---CCCC----CcccHHHHHHHHHHHHHHHHHH-hCCCCCCEEEEECCCcc-hHHHHHHHHHHhCeEEeCc
Confidence 355666653 2222 2479999998888888766320 36788999988877543 2334477889999998877
Q ss_pred CC--CHHHHHHHhhhhcCeEEEecchHHHHH
Q 014742 298 RG--DVRYLMEDIQELKPTMFSGVPRVYDRI 326 (419)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~l~~~P~~~~~l 326 (419)
+. ..+.+...+++.++..++..+.....+
T Consensus 123 ~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 153 (560)
T PLN02574 123 NPSSSLGEIKKRVVDCSVGLAFTSPENVEKL 153 (560)
T ss_pred CcccCHHHHHHHHHhcCCEEEEECHHHHHHH
Confidence 64 788899999999999999888766554
No 179
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=57.49 E-value=97 Score=30.92 Aligned_cols=87 Identities=9% Similarity=-0.121 Sum_probs=68.1
Q ss_pred EEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeE
Q 014742 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (419)
Q Consensus 238 V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~ 315 (419)
-.+|...+...+..+...+.. .++.++|++....+-... ....+++++..|+..+..+. ....+...+++.+++.
T Consensus 10 ~~~ty~el~~~v~~~a~~L~~--~g~~~~~~V~i~~~~~~~-~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ 86 (502)
T PRK08276 10 EVVTYGELEARSNRLAHGLRA--LGLREGDVVAILLENNPE-FFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKV 86 (502)
T ss_pred cEEEHHHHHHHHHHHHHHHHH--hCCCCCCEEEEEeCCCHH-HHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCE
Confidence 358999999888888887644 367788999888766533 34457889999999988765 7888889999999999
Q ss_pred EEecchHHHHHH
Q 014742 316 FSGVPRVYDRIY 327 (419)
Q Consensus 316 l~~~P~~~~~l~ 327 (419)
++..+.....+.
T Consensus 87 ii~~~~~~~~~~ 98 (502)
T PRK08276 87 LIVSAALADTAA 98 (502)
T ss_pred EEEccchhhHHH
Confidence 999888776553
No 180
>PRK06839 acyl-CoA synthetase; Validated
Probab=57.34 E-value=1.3e+02 Score=29.82 Aligned_cols=99 Identities=8% Similarity=-0.037 Sum_probs=73.0
Q ss_pred CCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEe
Q 014742 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (419)
Q Consensus 218 ~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~ 297 (419)
.++.++++. + +..+|+..+...+..+...+... .++.+++++...++-... ....+++++..|+..+..
T Consensus 15 ~p~~~a~~~---~------~~~~ty~~l~~~~~~la~~L~~~-~g~~~~~~V~i~~~~~~~-~~~~~la~~~~G~~~~~~ 83 (496)
T PRK06839 15 HPDRIAIIT---E------EEEMTYKQLHEYVSKVAAYLIYE-LNVKKGERIAILSQNSLE-YIVLLFAIAKVECIAVPL 83 (496)
T ss_pred CCCCeEEEE---C------CceEEHHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEec
Confidence 356666653 1 35799999999888887765221 267788998887766533 333477889999988877
Q ss_pred CC--CHHHHHHHhhhhcCeEEEecchHHHHHH
Q 014742 298 RG--DVRYLMEDIQELKPTMFSGVPRVYDRIY 327 (419)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~l~~~P~~~~~l~ 327 (419)
+. +++.+...+++.+++.++..+.....+.
T Consensus 84 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~ 115 (496)
T PRK06839 84 NIRLTENELIFQLKDSGTTVLFVEKTFQNMAL 115 (496)
T ss_pred CcccCHHHHHHHHHhcCceEEEEcHHHHHHHH
Confidence 64 8888889999999999999888765543
No 181
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=57.13 E-value=62 Score=31.30 Aligned_cols=66 Identities=12% Similarity=0.091 Sum_probs=47.9
Q ss_pred HHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccC-----CChhHHHHHHhhcCceEEEEe
Q 014742 87 AIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT-----LGANAVEFIINHAEVSIAFVQ 156 (419)
Q Consensus 87 ~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~-----~~~~~l~~~l~~~~~~~vi~~ 156 (419)
+..+.-.|+.+++++||-|.+ .+.-|+...=++...|+.+|.+|-+ .+++.+...+... ++.|+.-
T Consensus 59 T~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipV 129 (374)
T COG0399 59 TAALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPV 129 (374)
T ss_pred HHHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEe
Confidence 344555577778999995544 4667888899999999999987544 5677888888775 5555544
No 182
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=57.09 E-value=89 Score=31.73 Aligned_cols=86 Identities=9% Similarity=0.059 Sum_probs=66.5
Q ss_pred EEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeE
Q 014742 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (419)
Q Consensus 238 V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~ 315 (419)
..+|+.++...+..+...+... ++.++|++...++-...+ ...+++++..|+..+..+. ..+.+...++..++..
T Consensus 54 ~~~Ty~~l~~~~~~la~~L~~~--g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ 130 (546)
T PLN02330 54 KAVTYGEVVRDTRRFAKALRSL--GLRKGQVVVVVLPNVAEY-GIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKL 130 (546)
T ss_pred CcccHHHHHHHHHHHHHHHHHh--CCCCCCEEEEECCCchHH-HHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeE
Confidence 4689999999998888876443 677889988887665432 2347788999998876654 7788899999999999
Q ss_pred EEecchHHHHH
Q 014742 316 FSGVPRVYDRI 326 (419)
Q Consensus 316 l~~~P~~~~~l 326 (419)
+...+..+..+
T Consensus 131 ~i~~~~~~~~~ 141 (546)
T PLN02330 131 IVTNDTNYGKV 141 (546)
T ss_pred EEEccchhhhH
Confidence 98887766554
No 183
>PLN02246 4-coumarate--CoA ligase
Probab=56.71 E-value=73 Score=32.23 Aligned_cols=87 Identities=9% Similarity=-0.046 Sum_probs=66.7
Q ss_pred EEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeE
Q 014742 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (419)
Q Consensus 238 V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~ 315 (419)
-.+|+..+...+..+...+.. .++.++|++...++-.- .....+++++..|+..+..+. ....+...++..++..
T Consensus 49 ~~~ty~el~~~~~~la~~L~~--~g~~~gd~V~i~~~~~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 125 (537)
T PLN02246 49 RVYTYADVELLSRRVAAGLHK--LGIRQGDVVMLLLPNCP-EFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKL 125 (537)
T ss_pred ceeeHHHHHHHHHHHHHHHHH--hCCCCCCEEEEECCCCh-HHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcE
Confidence 369999999998888876643 37788899888866542 223347788889999887765 8888899999999999
Q ss_pred EEecchHHHHHH
Q 014742 316 FSGVPRVYDRIY 327 (419)
Q Consensus 316 l~~~P~~~~~l~ 327 (419)
+.........+.
T Consensus 126 li~~~~~~~~~~ 137 (537)
T PLN02246 126 IITQSCYVDKLK 137 (537)
T ss_pred EEEccchHHHHH
Confidence 988777665553
No 184
>PRK13383 acyl-CoA synthetase; Provisional
Probab=56.40 E-value=76 Score=31.93 Aligned_cols=86 Identities=7% Similarity=-0.100 Sum_probs=67.3
Q ss_pred EeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEE
Q 014742 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (419)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l 316 (419)
.+|...+...+..+...+.. .++.++|++...++-.-. .+..+++++..|+..+..+. ..+.+...+++.++..+
T Consensus 60 ~lTy~el~~~~~~la~~L~~--~gi~~g~~V~i~~~~~~~-~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~i 136 (516)
T PRK13383 60 ALSYRELQRATESLARRLTR--DGVAPGRAVGVMCRNGRG-FVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTV 136 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHh--cCCCCCCEEEEECCCCHH-HHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEE
Confidence 58999999988888887643 367788998888765422 33347788999999988765 88999999999999999
Q ss_pred EecchHHHHHH
Q 014742 317 SGVPRVYDRIY 327 (419)
Q Consensus 317 ~~~P~~~~~l~ 327 (419)
...+.+...+.
T Consensus 137 i~~~~~~~~~~ 147 (516)
T PRK13383 137 VADNEFAERIA 147 (516)
T ss_pred EEchhHHHHHH
Confidence 99887766543
No 185
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=56.17 E-value=44 Score=32.06 Aligned_cols=65 Identities=18% Similarity=0.138 Sum_probs=43.5
Q ss_pred HHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccC-----CChhHHHHHHhhcCceEEEEe
Q 014742 88 IRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT-----LGANAVEFIINHAEVSIAFVQ 156 (419)
Q Consensus 88 ~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~-----~~~~~l~~~l~~~~~~~vi~~ 156 (419)
..+.-.|...|+++||.|++-.- -+....-++..+|+.++.++.+ .+.+.+...+..-. +.|+..
T Consensus 51 ~Al~~al~~l~~~~gdeVi~p~~---t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~~ 120 (363)
T PF01041_consen 51 SALHLALRALGLGPGDEVIVPAY---TFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILVV 120 (363)
T ss_dssp HHHHHHHHHTTGGTTSEEEEESS---S-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEEE
T ss_pred HHHHHHHHhcCCCcCceEecCCC---cchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEEe
Confidence 34455677789999999988744 4556668899999999987555 46677777776544 555543
No 186
>PRK09088 acyl-CoA synthetase; Validated
Probab=55.97 E-value=1.4e+02 Score=29.68 Aligned_cols=95 Identities=13% Similarity=0.097 Sum_probs=69.1
Q ss_pred CCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEe
Q 014742 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (419)
Q Consensus 218 ~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~ 297 (419)
.++.++++....| ..+|+..+...+..+...+.. .++.++|++...++-... .+...++++..|+..+..
T Consensus 8 ~p~~~a~~~~~~~-------~~~ty~~l~~~v~~~a~~l~~--~g~~~~~~v~i~~~~~~~-~~~~~la~~~~G~~~v~~ 77 (488)
T PRK09088 8 QPQRLAAVDLALG-------RRWTYAELDALVGRLAAVLRR--RGCVDGERLAVLARNSVW-LVALHFACARVGAIYVPL 77 (488)
T ss_pred CCCceEEEecCCC-------cEEEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEEee
Confidence 3555555433222 368999999998888776643 367788998887766544 233478889999988877
Q ss_pred CC--CHHHHHHHhhhhcCeEEEecchH
Q 014742 298 RG--DVRYLMEDIQELKPTMFSGVPRV 322 (419)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~l~~~P~~ 322 (419)
+. ..+.+...+++.+++.+++....
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~ii~~~~~ 104 (488)
T PRK09088 78 NWRLSASELDALLQDAEPRLLLGDDAV 104 (488)
T ss_pred CccCCHHHHHHHHHhCCCCEEEEcchh
Confidence 65 88889999999999999876644
No 187
>PRK07514 malonyl-CoA synthase; Validated
Probab=55.69 E-value=97 Score=30.87 Aligned_cols=88 Identities=11% Similarity=0.045 Sum_probs=68.3
Q ss_pred eEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCe
Q 014742 237 GVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPT 314 (419)
Q Consensus 237 ~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t 314 (419)
+..+|+..+...+..+...+.. .++.++|++....+-.. -....+++++..|+..+..+. ....+...++..++.
T Consensus 26 ~~~~Ty~eL~~~~~~la~~L~~--~g~~~gd~v~i~~~~~~-e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~ 102 (504)
T PRK07514 26 GLRYTYGDLDAASARLANLLVA--LGVKPGDRVAVQVEKSP-EALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPA 102 (504)
T ss_pred CCEEcHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCc
Confidence 3479999999888888876643 36778899888877652 233347788999998887765 788899999999999
Q ss_pred EEEecchHHHHHH
Q 014742 315 MFSGVPRVYDRIY 327 (419)
Q Consensus 315 ~l~~~P~~~~~l~ 327 (419)
.+...+.....+.
T Consensus 103 ~ii~~~~~~~~~~ 115 (504)
T PRK07514 103 LVVCDPANFAWLS 115 (504)
T ss_pred EEEEccchhHHHH
Confidence 9999888776553
No 188
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=55.44 E-value=61 Score=31.34 Aligned_cols=59 Identities=14% Similarity=0.110 Sum_probs=37.4
Q ss_pred HHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccC-----CChhHHHHHHhhcCceEEEEe
Q 014742 94 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT-----LGANAVEFIINHAEVSIAFVQ 156 (419)
Q Consensus 94 L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~-----~~~~~l~~~l~~~~~~~vi~~ 156 (419)
++..++++||.|.+-.+ .|.....++...|+.+++++.+ .+.+.+...+.. ++++|+..
T Consensus 63 l~al~~~pGd~Viv~~~---t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~ 126 (376)
T TIGR02379 63 ALLLDIQPGDEVIMPSY---TFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPV 126 (376)
T ss_pred HHHcCCCCcCEEEECCC---CcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEe
Confidence 44457889998887443 4555566677889888777543 345556665543 56666544
No 189
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=54.69 E-value=55 Score=33.19 Aligned_cols=74 Identities=15% Similarity=0.059 Sum_probs=58.2
Q ss_pred eeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcC--CchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEE
Q 014742 78 LTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGS--NCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV 155 (419)
Q Consensus 78 ~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~--n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 155 (419)
+|+......+.- .....|+++.|+|-+.+| ++...++-+-+|+..|+++| |..++|+.....-..+.++.++-.
T Consensus 262 ith~r~~~~a~g---~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~V-lrkKFSAS~FW~DC~k~~~Tv~QY 337 (649)
T KOG1179|consen 262 ITHLRYLQGAAG---FYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVV-LRKKFSASNFWDDCRKYNVTVIQY 337 (649)
T ss_pred HHHHHHHHHHHH---HHHHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEE-EecccchhhhHHHHHHhCCeeeeh
Confidence 455444444332 233459999999999999 88888999999999999877 789999999988888888877654
No 190
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=54.34 E-value=1.2e+02 Score=30.71 Aligned_cols=85 Identities=6% Similarity=-0.027 Sum_probs=65.7
Q ss_pred EEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeE
Q 014742 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (419)
Q Consensus 238 V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~ 315 (419)
..+|+.++...+..+...+... ++.++|++...++-... ....+++++..|+..+..+. ..+.+...+++.+++.
T Consensus 47 ~~lTy~~l~~~~~~~a~~L~~~--gi~~gd~V~i~~~n~~~-~~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~ 123 (557)
T PRK07059 47 KAITYGELDELSRALAAWLQSR--GLAKGARVAIMMPNVLQ-YPVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEA 123 (557)
T ss_pred ceeeHHHHHHHHHHHHHHHHHh--CCCCCCEEEEECCCCHH-HHHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceE
Confidence 4789999999998888876443 67788998877665433 33446888999999987754 7888999999999999
Q ss_pred EEecchHHHH
Q 014742 316 FSGVPRVYDR 325 (419)
Q Consensus 316 l~~~P~~~~~ 325 (419)
++....+...
T Consensus 124 vi~~~~~~~~ 133 (557)
T PRK07059 124 IVVLENFATT 133 (557)
T ss_pred EEEchhhHHH
Confidence 9887765443
No 191
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=53.96 E-value=1.9e+02 Score=30.06 Aligned_cols=98 Identities=17% Similarity=0.213 Sum_probs=72.3
Q ss_pred CCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEe
Q 014742 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (419)
Q Consensus 218 ~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~ 297 (419)
.++.++++.. +..+|. .-.+|.+.+...+..+...+.. .++.++|++...+|-.-- ....+++++..|+..+..
T Consensus 66 ~p~~~A~~~~-~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~--~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~Gav~v~~ 139 (629)
T PRK10524 66 RPEQLALIAV-STETDE--ERTYTFRQLHDEVNRMAAMLRS--LGVQRGDRVLIYMPMIAE-AAFAMLACARIGAIHSVV 139 (629)
T ss_pred CCCCeEEEEE-cCCCCc--eEEEeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCHH-HHHHHHHHHHhCcEEEee
Confidence 4567776543 222222 3468999999998888887643 378899999999877533 334578889999988777
Q ss_pred CC--CHHHHHHHhhhhcCeEEEecch
Q 014742 298 RG--DVRYLMEDIQELKPTMFSGVPR 321 (419)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~l~~~P~ 321 (419)
.. ..+.+...|...++..+++...
T Consensus 140 ~~~~~~~~l~~~l~~~~~~~li~~~~ 165 (629)
T PRK10524 140 FGGFASHSLAARIDDAKPVLIVSADA 165 (629)
T ss_pred CCCCCHHHHHHHHHhcCCcEEEEccC
Confidence 54 8888999999999999988654
No 192
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=53.95 E-value=1.9e+02 Score=29.40 Aligned_cols=94 Identities=12% Similarity=0.016 Sum_probs=71.6
Q ss_pred CCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEe
Q 014742 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (419)
Q Consensus 218 ~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~ 297 (419)
.++.++++...-+. .+|++.+...+..+...+... ++.++|++...++-..- .+..+++++..|+..+..
T Consensus 24 ~~~~~a~~~~~~~~-------~~Ty~el~~~~~~~A~~L~~~--~v~~gdrVail~~N~~e-~~~~~~a~~~~Gav~vpl 93 (534)
T COG0318 24 NPDRPALIFLGRGG-------RLTYRELDRRANRLAAALQAL--GVKPGDRVAILLPNSPE-FLIAFLAALRAGAVAVPL 93 (534)
T ss_pred CCCceEEEEcCCCc-------eeeHHHHHHHHHHHHHHHHHc--CCCCCCEEEEECCCCHH-HHHHHHHHHhcCEEEeec
Confidence 35566665554433 899999999999988877443 37789998888776533 233477889999999988
Q ss_pred CC--CHHHHHHHhhhhcCeEEEecch
Q 014742 298 RG--DVRYLMEDIQELKPTMFSGVPR 321 (419)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~l~~~P~ 321 (419)
.. .+..+...++..++..++....
T Consensus 94 n~~~~~~~l~~~l~~~~~~~~~~~~~ 119 (534)
T COG0318 94 NPRLTPRELAYILNDAGAKVLITSAE 119 (534)
T ss_pred CcccCHHHHHHHHHhcCCeEEEEccc
Confidence 65 7888888898889999999877
No 193
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=53.57 E-value=1.2e+02 Score=30.57 Aligned_cols=98 Identities=11% Similarity=0.005 Sum_probs=69.9
Q ss_pred CCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeC
Q 014742 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (419)
Q Consensus 219 ~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~ 298 (419)
++.++++..-... .....+|+.++...+..+...+.. .++.+++++...++-.. -.....++++..|+.++..+
T Consensus 36 p~~~a~~~~~~~~---~~~~~~Ty~eL~~~~~~~a~~L~~--~g~~~g~~V~i~~~~~~-~~~~~~la~~~~G~~~v~l~ 109 (538)
T TIGR03208 36 PDKPALTAYRDGH---GAVRRFSYRELDCRVDRIAVGLAR--LGVGRGDVVSFQLPNRW-EFTALYLACARIGAVLNPLM 109 (538)
T ss_pred CCceEEEeecccC---CCcceecHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCH-HHHHHHHHHHhcCEEEeccC
Confidence 4566665532211 113468999999998888887643 36778898888776533 23444778899999887765
Q ss_pred C--CHHHHHHHhhhhcCeEEEecchH
Q 014742 299 G--DVRYLMEDIQELKPTMFSGVPRV 322 (419)
Q Consensus 299 ~--~~~~~~~~i~~~~~t~l~~~P~~ 322 (419)
. ..+.+...++..++..+++.+.+
T Consensus 110 ~~~~~~~l~~~l~~~~~~~li~~~~~ 135 (538)
T TIGR03208 110 PIFRERELSFMLNHADSKVFVVPSVF 135 (538)
T ss_pred cccCHHHHHHHHHhcCCeEEEEcccc
Confidence 4 78889999999999999887654
No 194
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=53.53 E-value=1.1e+02 Score=28.80 Aligned_cols=72 Identities=13% Similarity=0.134 Sum_probs=54.7
Q ss_pred HHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcC
Q 014742 93 AMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCL 167 (419)
Q Consensus 93 ~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~ 167 (419)
-|++.|+.||+.|+|..-.+.-++...+|.++ |.-+..|+.... .-...++..++...+...+..+......
T Consensus 173 pLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAM-G~rV~vis~~~~--kkeea~~~LGAd~fv~~~~d~d~~~~~~ 244 (360)
T KOG0023|consen 173 PLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAM-GMRVTVISTSSK--KKEEAIKSLGADVFVDSTEDPDIMKAIM 244 (360)
T ss_pred hhHHcCCCCCcEEEEecCcccchHHHHHHHHh-CcEEEEEeCCch--hHHHHHHhcCcceeEEecCCHHHHHHHH
Confidence 47888999999999999999999999998876 556666766542 2346788889998888776665554443
No 195
>PLN02479 acetate-CoA ligase
Probab=53.22 E-value=1.7e+02 Score=29.80 Aligned_cols=85 Identities=6% Similarity=-0.088 Sum_probs=67.2
Q ss_pred EeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEE
Q 014742 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (419)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l 316 (419)
.+|...+...+..+...+.. .++.++|++...++-.-. .+...++++..|+..+..+. ..+.+...+++.++..+
T Consensus 45 ~~ty~eL~~~~~~lA~~L~~--~g~~~gd~V~i~~~n~~~-~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~i 121 (567)
T PLN02479 45 RYTWAQTYQRCRRLASALAK--RSIGPGSTVAVIAPNIPA-MYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVV 121 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCcHH-HHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEE
Confidence 58999999999998887643 378889999888775432 23347788999988888765 88999999999999999
Q ss_pred EecchHHHHH
Q 014742 317 SGVPRVYDRI 326 (419)
Q Consensus 317 ~~~P~~~~~l 326 (419)
+..+..+...
T Consensus 122 i~~~~~~~~~ 131 (567)
T PLN02479 122 MVDQEFFTLA 131 (567)
T ss_pred EEchhhhhHH
Confidence 9988776544
No 196
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=52.91 E-value=28 Score=30.06 Aligned_cols=33 Identities=15% Similarity=0.386 Sum_probs=28.7
Q ss_pred eEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Q 014742 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIY 108 (419)
Q Consensus 76 ~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~ 108 (419)
..+||.++.+.+..+|..+++.|.+|.-.|++.
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~s~~~PDvIiaia 37 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRASGFKPDVIVAIA 37 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHHcCCCCCEEEEEc
Confidence 579999999999999999999999877666654
No 197
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=52.89 E-value=1.2e+02 Score=30.83 Aligned_cols=80 Identities=16% Similarity=0.035 Sum_probs=62.5
Q ss_pred EEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeE
Q 014742 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (419)
Q Consensus 238 V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~ 315 (419)
..+|+..+...+..+...+.. .++.++|++...+|-.-. .+..+++++..|+.++..+. ..+.+...++..++..
T Consensus 48 ~~~Ty~~l~~~v~~la~~l~~--~G~~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 124 (547)
T PRK06087 48 ASYTYSALDHAASRLANWLLA--KGIEPGDRVAFQLPGWCE-FTIIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAKM 124 (547)
T ss_pred CEEEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCHH-HHHHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCeE
Confidence 368999999999888887644 378889999887765432 33447889999998887755 7888889999999998
Q ss_pred EEecc
Q 014742 316 FSGVP 320 (419)
Q Consensus 316 l~~~P 320 (419)
+++..
T Consensus 125 l~~~~ 129 (547)
T PRK06087 125 FFAPT 129 (547)
T ss_pred EEEec
Confidence 87754
No 198
>PRK11761 cysM cysteine synthase B; Provisional
Probab=52.41 E-value=1.3e+02 Score=28.01 Aligned_cols=77 Identities=10% Similarity=0.071 Sum_probs=52.5
Q ss_pred eeHHHHHHHHHHHHHHHHhCC-CCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEe
Q 014742 78 LTYQEVYDAAIRFGSAMRSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQ 156 (419)
Q Consensus 78 ~Ty~el~~~~~~la~~L~~~g-~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~ 156 (419)
=|+++ +.+..+...+.+.| +.+|+.|.. ...+---..+.++|...|..+..+-|.....+....++..++++++++
T Consensus 40 GS~K~--R~a~~~~~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~ 116 (296)
T PRK11761 40 GSVKD--RPALSMIVQAEKRGEIKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVP 116 (296)
T ss_pred CCchh--HHHHHHHHHHHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeC
Confidence 34444 33444444455556 467777654 344444556677888899977777676666788889999999999999
Q ss_pred C
Q 014742 157 E 157 (419)
Q Consensus 157 ~ 157 (419)
.
T Consensus 117 ~ 117 (296)
T PRK11761 117 K 117 (296)
T ss_pred C
Confidence 6
No 199
>PLN02614 long-chain acyl-CoA synthetase
Probab=51.94 E-value=2.6e+02 Score=29.35 Aligned_cols=87 Identities=10% Similarity=-0.049 Sum_probs=67.2
Q ss_pred EEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeE
Q 014742 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (419)
Q Consensus 238 V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~ 315 (419)
..+|+..+...+..+...+.. .++.++|++...++-..- .+...++++..|+..+-... .++.+...++..++.+
T Consensus 78 ~~~Ty~el~~~v~~lA~~L~~--~Gv~~Gd~Vai~~~n~~e-~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~ 154 (666)
T PLN02614 78 VWQTYQEVYDIVIKLGNSLRS--VGVKDEAKCGIYGANSPE-WIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSI 154 (666)
T ss_pred EEeEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCE
Confidence 457999999999888886643 378889999888776533 23347788999998887755 8899999999999999
Q ss_pred EEecchHHHHHH
Q 014742 316 FSGVPRVYDRIY 327 (419)
Q Consensus 316 l~~~P~~~~~l~ 327 (419)
+++....+..+.
T Consensus 155 vi~~~~~~~~~~ 166 (666)
T PLN02614 155 VFVEEKKISELF 166 (666)
T ss_pred EEECHHHHHHHH
Confidence 998876655543
No 200
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=51.90 E-value=72 Score=30.78 Aligned_cols=58 Identities=12% Similarity=0.084 Sum_probs=38.1
Q ss_pred HhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccC-----CChhHHHHHHhhcCceEEEEe
Q 014742 95 RSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT-----LGANAVEFIINHAEVSIAFVQ 156 (419)
Q Consensus 95 ~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~-----~~~~~l~~~l~~~~~~~vi~~ 156 (419)
...++++||.|.+-.+. +.....++...|+.++.++.+ .+.+++...+.. ++++|+..
T Consensus 64 ~~~~~~~Gd~Viv~~~t---~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~ 126 (375)
T PRK11706 64 LLLDIQPGDEVIMPSYT---FVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPV 126 (375)
T ss_pred HHhCCCCCCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEe
Confidence 34467899998876554 444456677889888877543 456677776654 56666644
No 201
>PRK07638 acyl-CoA synthetase; Validated
Probab=51.68 E-value=1.5e+02 Score=29.51 Aligned_cols=94 Identities=12% Similarity=0.017 Sum_probs=65.4
Q ss_pred CCCCCcee--EeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchh-HHHHHHHHHHcCCeEEeeccCCChhHHHHHH
Q 014742 69 DGKVGPYV--WLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE-WIIAMEACNSQAITYVPLYDTLGANAVEFII 145 (419)
Q Consensus 69 ~~~~~~~~--~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l 145 (419)
.|.++..+ .+|...+...+.... ...++.++|++....+-... ++...+..+..|+..+.. +..++.++...+
T Consensus 152 SGtTG~PKgv~~s~~~~~~~~~~~~---~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i 227 (487)
T PRK07638 152 SGSTGKPKAFLRAQQSWLHSFDCNV---HDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKL 227 (487)
T ss_pred CCCCCCCcEEEEecHHHHHHHHHHH---HhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHH
Confidence 44444433 467777765554333 34478899999877664433 344566677788887755 567889999999
Q ss_pred hhcCceEEEEeCCChhhHhhc
Q 014742 146 NHAEVSIAFVQENKIPSILSC 166 (419)
Q Consensus 146 ~~~~~~~vi~~~~~~~~~~~~ 166 (419)
++.++.++......+..+.+.
T Consensus 228 ~~~~~t~~~~~P~~~~~l~~~ 248 (487)
T PRK07638 228 ETENISVMYTVPTMLESLYKE 248 (487)
T ss_pred HHcCCeEEEeCcHHHHHHHhC
Confidence 999999999988877766654
No 202
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=51.58 E-value=8.4 Score=39.71 Aligned_cols=30 Identities=27% Similarity=0.312 Sum_probs=25.1
Q ss_pred CCCCceEEEEeCCCCC-CCCCeEEeechhHH
Q 014742 217 KKKTNISTIMYTSGTT-GEPKGVVLTNQAIV 246 (419)
Q Consensus 217 ~~~~~~~~i~~TSGtT-G~PK~V~~sh~~l~ 246 (419)
..++.+.+...||||| |.+|.+.+|...+-
T Consensus 97 L~~~pi~~f~~SSGTT~g~~K~IP~T~~~l~ 127 (597)
T PLN02249 97 LSSHPITEFLTSSGTSAGERKLMPTIEEDID 127 (597)
T ss_pred eCCCchhhhcccCCCCCCceeEEeccHHHHH
Confidence 3467778889999999 89999999996664
No 203
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=51.32 E-value=1.7e+02 Score=26.46 Aligned_cols=72 Identities=13% Similarity=0.108 Sum_probs=47.7
Q ss_pred HHHHHHHHHHhCC-CCCCCeEEEEcCCchhHHHHHHHHHHc------C--CeEEeeccCC---ChhHHHHHHhhcCceEE
Q 014742 86 AAIRFGSAMRSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQ------A--ITYVPLYDTL---GANAVEFIINHAEVSIA 153 (419)
Q Consensus 86 ~~~~la~~L~~~g-~~~gd~V~l~~~n~~~~~~~~lA~~~~------G--~~~vpl~~~~---~~~~l~~~l~~~~~~~v 153 (419)
..+++.+.+.+.+ +.+|++|++.+..+.+.++++..+... | ..++-++... ..+.+..+.+..+..+.
T Consensus 12 ~~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~~~lgI~~~ 91 (258)
T PRK10696 12 LRRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYLESLGVPYH 91 (258)
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHHHHhCCCEE
Confidence 3455556677654 578999999999999998887666442 2 3444555533 33445666777777776
Q ss_pred EEeC
Q 014742 154 FVQE 157 (419)
Q Consensus 154 i~~~ 157 (419)
+.+.
T Consensus 92 v~~~ 95 (258)
T PRK10696 92 IEEQ 95 (258)
T ss_pred EEEe
Confidence 6654
No 204
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=51.26 E-value=1.7e+02 Score=29.75 Aligned_cols=87 Identities=8% Similarity=-0.048 Sum_probs=66.2
Q ss_pred EEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeE
Q 014742 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (419)
Q Consensus 238 V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~ 315 (419)
..+|+..+...+..+...+... .++.++|++...++-.-- ....+++++..|+..+..+. ..+.+...+++.++..
T Consensus 48 ~~~Ty~el~~~~~~la~~L~~~-~gi~~gd~Vai~~~n~~~-~~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ 125 (562)
T PRK05677 48 KTLTYGELYKLSGAFAAWLQQH-TDLKPGDRIAVQLPNVLQ-YPVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKA 125 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceE
Confidence 3689999999998888766220 267788999888776533 33447788999999887764 8889999999999999
Q ss_pred EEecchHHHHH
Q 014742 316 FSGVPRVYDRI 326 (419)
Q Consensus 316 l~~~P~~~~~l 326 (419)
++........+
T Consensus 126 ii~~~~~~~~~ 136 (562)
T PRK05677 126 LVCLANMAHLA 136 (562)
T ss_pred EEEecchhhhH
Confidence 98876655443
No 205
>PRK05850 acyl-CoA synthetase; Validated
Probab=50.87 E-value=1.8e+02 Score=29.65 Aligned_cols=105 Identities=11% Similarity=0.075 Sum_probs=74.2
Q ss_pred CCCceEEEEeCCCCCCCCC--eEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEE
Q 014742 218 KKTNISTIMYTSGTTGEPK--GVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIG 295 (419)
Q Consensus 218 ~~~~~~~i~~TSGtTG~PK--~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~iv 295 (419)
.++.++++..... +.++ ...+|+..+...+..+...+... + .++|++...++-. .-....+++++..|+.++
T Consensus 14 ~p~~~a~~~~~~~--~~~~~~~~~lty~eL~~~v~~~A~~L~~~--g-~~gd~V~l~~~n~-~~~~~~~lA~~~~G~v~v 87 (578)
T PRK05850 14 QPDDAAFTFIDYE--QDPAGVAETLTWSQLYRRTLNVAEELRRH--G-STGDRAVILAPQG-LEYIVAFLGALQAGLIAV 87 (578)
T ss_pred CCCceEEEEEccC--CCCCCceeeecHHHHHHHHHHHHHHHHHh--C-CCCCEEEEEcCCc-ccHHHHHHHHHHcCceEE
Confidence 4566666543211 1122 35799999999998888877442 3 4678988887754 323345788999999988
Q ss_pred EeCC-----CHHHHHHHhhhhcCeEEEecchHHHHHHH
Q 014742 296 FWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYT 328 (419)
Q Consensus 296 l~~~-----~~~~~~~~i~~~~~t~l~~~P~~~~~l~~ 328 (419)
..+. ..+.+...|+..++..+++.+.....+.+
T Consensus 88 pl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~ 125 (578)
T PRK05850 88 PLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTE 125 (578)
T ss_pred ecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHH
Confidence 8752 56788899999999999999887776543
No 206
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=50.49 E-value=1.7e+02 Score=25.68 Aligned_cols=83 Identities=12% Similarity=0.071 Sum_probs=0.0
Q ss_pred HHHHHHH-HHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhh
Q 014742 277 HIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKL 353 (419)
Q Consensus 277 h~~g~~~-~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (419)
|..|..+ ...--..|..++.... .++.+.+.+.+++|+++...-.+-..+.
T Consensus 101 HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~-------------------------- 154 (213)
T cd02069 101 HDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGLLVPSLD-------------------------- 154 (213)
T ss_pred hHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccchhccHH--------------------------
Q ss_pred hhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEccCCCCHHHHHH
Q 014742 354 GNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEF 402 (419)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~G~~l~~~~~~~ 402 (419)
.-...+..+++. |.+++ +++||.+++++..+.
T Consensus 155 ---------------~~~~~i~~L~~~-~~~~~-i~vGG~~~~~~~~~~ 186 (213)
T cd02069 155 ---------------EMVEVAEEMNRR-GIKIP-LLIGGAATSRKHTAV 186 (213)
T ss_pred ---------------HHHHHHHHHHhc-CCCCe-EEEEChhcCHHHHhh
No 207
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=50.17 E-value=2.8e+02 Score=28.34 Aligned_cols=103 Identities=10% Similarity=-0.036 Sum_probs=74.8
Q ss_pred CCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEe
Q 014742 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (419)
Q Consensus 218 ~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~ 297 (419)
.++.++++.... ..-.+|...+...+..+...+... .+..++|++...++-..- .+..+++++..|+..+..
T Consensus 23 ~~~~~a~~~~~~------~~~~~Ty~el~~~~~~la~~L~~~-~g~~~gd~V~~~~~n~~e-~~~~~lA~~~~G~~~v~l 94 (576)
T PRK05620 23 HGDTTVTTWGGA------EQEQTTFAAIGARAAALAHALHDE-LGITGDQRVGSMMYNCAE-HLEVLFAVACMGAVFNPL 94 (576)
T ss_pred CCCceEEEEcCC------ceEEEeHHHHHHHHHHHHHHHHHh-cCCCCCCEEEEEeCCCHH-HHHHHHHHHhcCCEEeec
Confidence 456666554211 235789999999998888876321 267788888888766433 234578889999988877
Q ss_pred CC--CHHHHHHHhhhhcCeEEEecchHHHHHHH
Q 014742 298 RG--DVRYLMEDIQELKPTMFSGVPRVYDRIYT 328 (419)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~l~~~P~~~~~l~~ 328 (419)
+. ..+.+...++..++..+++.+.....+.+
T Consensus 95 ~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~ 127 (576)
T PRK05620 95 NKQLMNDQIVHIINHAEDEVIVADPRLAEQLGE 127 (576)
T ss_pred ccccCHHHHHHHHhccCCcEEEEChhhHHHHHH
Confidence 65 78999999999999999998877666544
No 208
>PRK08162 acyl-CoA synthetase; Validated
Probab=49.82 E-value=1.2e+02 Score=30.79 Aligned_cols=86 Identities=9% Similarity=-0.056 Sum_probs=67.9
Q ss_pred EeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEE
Q 014742 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (419)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l 316 (419)
.+|...+...+..+...+.. .++..+|++...++-... .+..+++++..|+..+..+. ..+.+...++..+++.+
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~--~g~~~g~~v~i~~~~~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i 119 (545)
T PRK08162 43 RRTWAETYARCRRLASALAR--RGIGRGDTVAVLLPNIPA-MVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVL 119 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHH--hCCCCCCEEEEECCCchH-HHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEE
Confidence 59999999999988887743 367788999888776543 23347788999988887765 88999999999999999
Q ss_pred EecchHHHHHH
Q 014742 317 SGVPRVYDRIY 327 (419)
Q Consensus 317 ~~~P~~~~~l~ 327 (419)
+..+.....+.
T Consensus 120 ~~~~~~~~~~~ 130 (545)
T PRK08162 120 IVDTEFAEVAR 130 (545)
T ss_pred EEccchhhHHH
Confidence 99988766543
No 209
>PRK05852 acyl-CoA synthetase; Validated
Probab=49.68 E-value=2.9e+02 Score=27.86 Aligned_cols=111 Identities=13% Similarity=-0.049 Sum_probs=71.2
Q ss_pred CCCCCcee--EeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCch--hHHHHHHHHHHcCCeEEe-eccCCChhHHHH
Q 014742 69 DGKVGPYV--WLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCP--EWIIAMEACNSQAITYVP-LYDTLGANAVEF 143 (419)
Q Consensus 69 ~~~~~~~~--~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~--~~~~~~lA~~~~G~~~vp-l~~~~~~~~l~~ 143 (419)
.|.++..+ .+|+..+...+..+...+ +++++|++..+.|-.. .++..+++++..|+..+. -...++...+..
T Consensus 185 SGTTG~PKgv~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~ 261 (534)
T PRK05852 185 GGTTGLPKMVPWTHANIASSVRAIITGY---RLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWD 261 (534)
T ss_pred CCCCCCCcEEEecHHHHHHHHHHHHHHh---CCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHH
Confidence 34444433 468888877666555444 6788998888777443 344557777777765443 344567888899
Q ss_pred HHhhcCceEEEEeCCChhhHhhcCcc-----CCCCccEEEEecC
Q 014742 144 IINHAEVSIAFVQENKIPSILSCLPR-----CCLYLKTIVSFAN 182 (419)
Q Consensus 144 ~l~~~~~~~vi~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 182 (419)
.+++.++..++........+.+.... ....++.++....
T Consensus 262 ~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G~ 305 (534)
T PRK05852 262 DIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFIRSCSA 305 (534)
T ss_pred HHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEEEECCC
Confidence 99999999999888766665543221 1234555555544
No 210
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=49.57 E-value=1.1e+02 Score=31.36 Aligned_cols=85 Identities=9% Similarity=-0.033 Sum_probs=66.9
Q ss_pred EeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEE
Q 014742 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (419)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l 316 (419)
.+|+.++...+..+...+.. .++..+|++....+-... .+..+++++..|+..+..+. ..+.+...+++.++..+
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~--~gi~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 133 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRA--LGVRPGDRVAIVLPNCPQ-HIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVA 133 (573)
T ss_pred cccHHHHHHHHHHHHHHHHH--hCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEE
Confidence 48999999988888876643 367788999888776543 23347788999999887754 89999999999999999
Q ss_pred EecchHHHHH
Q 014742 317 SGVPRVYDRI 326 (419)
Q Consensus 317 ~~~P~~~~~l 326 (419)
++.......+
T Consensus 134 i~~~~~~~~~ 143 (573)
T PRK05605 134 IVWDKVAPTV 143 (573)
T ss_pred EechhhHHHH
Confidence 9888766554
No 211
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=49.42 E-value=1.2e+02 Score=34.99 Aligned_cols=100 Identities=8% Similarity=-0.034 Sum_probs=70.7
Q ss_pred CCCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEe
Q 014742 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (419)
Q Consensus 218 ~~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~ 297 (419)
.++.++++...+...+......+|++.+...+..+...+.. .+..+++++...++-... .+..+++++..|+..+..
T Consensus 249 ~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~--~gv~~g~~V~i~~~~~~~-~i~~~lA~l~~G~~~vpl 325 (1389)
T TIGR03443 249 HPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLK--TGIKRGDVVMIYAYRGVD-LVVAVMGVLKAGATFSVI 325 (1389)
T ss_pred CCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHH--hCCCCCCEEEEEecCCHH-HHHHHHHHHhhCcEEecc
Confidence 46777776533211111123579999999999998887744 367788999888776533 234578899999998887
Q ss_pred CC--CHHHHHHHhhhhcCeEEEecc
Q 014742 298 RG--DVRYLMEDIQELKPTMFSGVP 320 (419)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~l~~~P 320 (419)
+. .++.+...++..++..+.+..
T Consensus 326 dp~~p~~~~~~~l~~~~~~~li~~~ 350 (1389)
T TIGR03443 326 DPAYPPARQTIYLSVAKPRALIVIE 350 (1389)
T ss_pred CCCCcHHHHHHHHHhcCCCEEEEec
Confidence 65 677788888888988877654
No 212
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=49.23 E-value=53 Score=26.61 Aligned_cols=41 Identities=7% Similarity=-0.013 Sum_probs=32.6
Q ss_pred HHHHHHHHhCCCCCCCeEEEEcCC---chhHHHHHHHHHHcCCe
Q 014742 88 IRFGSAMRSRGVNPGDRCGIYGSN---CPEWIIAMEACNSQAIT 128 (419)
Q Consensus 88 ~~la~~L~~~g~~~gd~V~l~~~n---~~~~~~~~lA~~~~G~~ 128 (419)
+.+.+.|.+.|+.+++.|.+++.. +.....+++.+..+|..
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~ 124 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHP 124 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCC
Confidence 467778888999999999999975 55666677788888865
No 213
>PLN03013 cysteine synthase
Probab=49.07 E-value=1.5e+02 Score=29.21 Aligned_cols=72 Identities=7% Similarity=0.057 Sum_probs=52.4
Q ss_pred HHHHHHHHHhCC-CCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCC
Q 014742 87 AIRFGSAMRSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (419)
Q Consensus 87 ~~~la~~L~~~g-~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (419)
+..+.....+.| +.+|....+....+---+.+.++|...|..++..-|.....+....++..++++++++..
T Consensus 158 A~~~l~~a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 158 GYSMVTDAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred HHHHHHHHHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 333333444555 578866556666666667777888889997777767777788899999999999999864
No 214
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=48.89 E-value=1.4e+02 Score=28.75 Aligned_cols=62 Identities=6% Similarity=0.028 Sum_probs=47.3
Q ss_pred hCC-CCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeC
Q 014742 96 SRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 157 (419)
Q Consensus 96 ~~g-~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~ 157 (419)
+.| +.||....+....+---+.+.++|...|.-+..+-|.....+....++..++++++++.
T Consensus 103 ~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 103 KKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 444 67785545555556666677788899999887777777777788999999999999974
No 215
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=48.34 E-value=1.6e+02 Score=30.87 Aligned_cols=88 Identities=10% Similarity=-0.021 Sum_probs=67.8
Q ss_pred EEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeE
Q 014742 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (419)
Q Consensus 238 V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~ 315 (419)
..+|+..+...+..+...+.. .++.++|++...++-..- .+...++++..|+..+-... ..+.+...++..++.+
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~--~Gv~~gd~Vai~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~ 152 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRS--RGVNPGDRCGIYGSNCPE-WIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSI 152 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCE
Confidence 468999999999988887633 368889999888775433 23347788999998887755 8899999999999999
Q ss_pred EEecchHHHHHHH
Q 014742 316 FSGVPRVYDRIYT 328 (419)
Q Consensus 316 l~~~P~~~~~l~~ 328 (419)
+++.......+.+
T Consensus 153 v~~~~~~~~~~~~ 165 (660)
T PLN02861 153 AFVQESKISSILS 165 (660)
T ss_pred EEECHHHHHHHHH
Confidence 9987766555433
No 216
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=48.19 E-value=1e+02 Score=31.11 Aligned_cols=88 Identities=5% Similarity=-0.047 Sum_probs=68.0
Q ss_pred EeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEE
Q 014742 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (419)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l 316 (419)
.+|+..+...+..+...+... .++..++++...++-. .-.+..+++++..|+..+..+. ....+...++..+++.+
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~~~-~g~~~g~~V~i~~~~~-~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 112 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQQE-CGVRKGDRVLLYMQNS-PQFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVA 112 (546)
T ss_pred eecHHHHHHHHHHHHHHHHHh-hCCCCCCEEEEECCCC-hHHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEE
Confidence 589999998888887766321 1677889888887754 3334458889999999887765 88899999999999999
Q ss_pred EecchHHHHHHH
Q 014742 317 SGVPRVYDRIYT 328 (419)
Q Consensus 317 ~~~P~~~~~l~~ 328 (419)
++.+.....+.+
T Consensus 113 i~~~~~~~~~~~ 124 (546)
T PRK08314 113 IVGSELAPKVAP 124 (546)
T ss_pred EEccchhhhHHH
Confidence 998887766544
No 217
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=48.00 E-value=1.8e+02 Score=26.97 Aligned_cols=67 Identities=7% Similarity=0.075 Sum_probs=46.2
Q ss_pred HHHHhCC-CCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCC
Q 014742 92 SAMRSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK 159 (419)
Q Consensus 92 ~~L~~~g-~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~ 159 (419)
....+.| +.+|++| +....+-.-..+.++|...|..+...-|..........++..++.+++++...
T Consensus 46 ~~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~~ 113 (298)
T TIGR01139 46 WDAEKRGLLKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGAE 113 (298)
T ss_pred HHHHHcCCCCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECCCC
Confidence 3444556 3677776 44444444555566778899877766666555666888999999999998753
No 218
>TIGR01101 V_ATP_synt_F vacuolar ATP synthase F subunit. This model describes the vacuolar ATP synthase F subunit (14 kDa subunit) in eukaryotes. In some archaeal species this protein subunit is referred as G subunit
Probab=47.86 E-value=1.1e+02 Score=23.99 Aligned_cols=78 Identities=8% Similarity=0.175 Sum_probs=52.7
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCe---------EEeeccCCChhHHHHH----HhhcCceEEEEeCCChhhHhhc
Q 014742 100 NPGDRCGIYGSNCPEWIIAMEACNSQAIT---------YVPLYDTLGANAVEFI----INHAEVSIAFVQENKIPSILSC 166 (419)
Q Consensus 100 ~~gd~V~l~~~n~~~~~~~~lA~~~~G~~---------~vpl~~~~~~~~l~~~----l~~~~~~~vi~~~~~~~~~~~~ 166 (419)
..+..|+++.. .+.+ +|...+|.- +...+.+.+.+++... +..-+..+|+..+...+.+...
T Consensus 3 ~~~~~IaVIGD--~Dtv---~GF~LaGi~~~~~~~~~nf~~v~~~t~~eei~~~~~~~l~~~digIIlIte~~a~~i~~~ 77 (115)
T TIGR01101 3 EKGKLIAVIGD--EDTV---VGFLLGGIGEINKNRHPNFLVVDKNTTVSEIEDCFNRFLKRDDIAIILINQHIAEMIRHA 77 (115)
T ss_pred CCCcEEEEEec--HHHH---HHHHHhCCCccccccccceeeecCCCCHHHHHHHHHHHhhcCCeEEEEEcHHHHHHhHHH
Confidence 35677999988 5555 445555553 3346666666665555 5557788888888877777766
Q ss_pred CccCCCCccEEEEecC
Q 014742 167 LPRCCLYLKTIVSFAN 182 (419)
Q Consensus 167 ~~~~~~~~~~~~~~~~ 182 (419)
+.+....++.++.+.+
T Consensus 78 I~~~~~~~PaIieIP~ 93 (115)
T TIGR01101 78 VDAHTRSIPAVLEIPS 93 (115)
T ss_pred HHhcCCcCCEEEEECC
Confidence 6666567788888776
No 219
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=47.79 E-value=1.6e+02 Score=29.76 Aligned_cols=123 Identities=12% Similarity=-0.019 Sum_probs=73.5
Q ss_pred CCCCCceeeeeccCCCCCcee--EeeHHHHHHHHHHHHHHHH-hCCCCCCCeEEEEcCCchhH-HHHHHHHHHcCCeEEe
Q 014742 56 IPNNQMLGGRKVSDGKVGPYV--WLTYQEVYDAAIRFGSAMR-SRGVNPGDRCGIYGSNCPEW-IIAMEACNSQAITYVP 131 (419)
Q Consensus 56 ~pd~~ai~~~~~~~~~~~~~~--~~Ty~el~~~~~~la~~L~-~~g~~~gd~V~l~~~n~~~~-~~~~lA~~~~G~~~vp 131 (419)
.++.++.+.. ..|.++..+ .+|...+.... .+..+. ..++.++|++..+.|-.-.+ ....++++..|+..+.
T Consensus 174 ~~~~~~~i~~--TSGTTG~PK~v~~s~~~~~~~~--~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~ 249 (539)
T PRK07008 174 DENQASSLCY--TSGTTGNPKGALYSHRSTVLHA--YGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVL 249 (539)
T ss_pred CcccceEEEE--CCCCCCCCcEEEEecHHHHHHH--HHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEE
Confidence 3454544432 144444433 45666554322 222332 45788899988777643222 2334677889988887
Q ss_pred eccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCcc---CCCCccEEEEecC
Q 014742 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPR---CCLYLKTIVSFAN 182 (419)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 182 (419)
..+....+.+...++..++..+......+..+.+.... ....++.++..+.
T Consensus 250 ~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~ 303 (539)
T PRK07008 250 PGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLRFSTLRRTVIGGS 303 (539)
T ss_pred ecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCCcccceEEEEcCC
Confidence 77778899999999999999988877665555443221 2234555544443
No 220
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=47.14 E-value=2.5e+02 Score=28.43 Aligned_cols=87 Identities=10% Similarity=-0.162 Sum_probs=66.5
Q ss_pred EEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeE
Q 014742 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (419)
Q Consensus 238 V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~ 315 (419)
..+|+..+...+..+...+.. .++..+|++...++-..- ....+++++..|+..+..+. ..+.+...++..++..
T Consensus 38 ~~~Ty~el~~~v~~la~~L~~--~g~~~gd~v~i~~~~~~~-~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 114 (542)
T PRK06018 38 VRTTYAQIHDRALKVSQALDR--DGIKLGDRVATIAWNTWR-HLEAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRV 114 (542)
T ss_pred eEEEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCchH-HHHHHHHHHhcCeEeeccccccCHHHHHHHHhccCCCE
Confidence 468999999999888886643 367788988877665433 23346788889999887765 7899999999999999
Q ss_pred EEecchHHHHHH
Q 014742 316 FSGVPRVYDRIY 327 (419)
Q Consensus 316 l~~~P~~~~~l~ 327 (419)
+++...+...+.
T Consensus 115 i~~~~~~~~~~~ 126 (542)
T PRK06018 115 VITDLTFVPILE 126 (542)
T ss_pred EEEccccHHHHH
Confidence 998876655543
No 221
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=46.76 E-value=80 Score=30.01 Aligned_cols=61 Identities=10% Similarity=0.111 Sum_probs=47.9
Q ss_pred HHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeC
Q 014742 93 AMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 157 (419)
Q Consensus 93 ~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~ 157 (419)
.|+..+++||++|++..-.+.-+....+|-+.- +-++.++.+ ++.....++.+++.++...
T Consensus 158 alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~g-a~Via~~~~---~~K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 158 ALKKANVKPGKWVAVVGAGGLGHMAVQYAKAMG-AEVIAITRS---EEKLELAKKLGADHVINSS 218 (339)
T ss_pred ehhhcCCCCCCEEEEECCcHHHHHHHHHHHHcC-CeEEEEeCC---hHHHHHHHHhCCcEEEEcC
Confidence 356678999999999999999999888887655 888888774 4444566777888888865
No 222
>PRK06188 acyl-CoA synthetase; Validated
Probab=46.53 E-value=1.4e+02 Score=29.95 Aligned_cols=102 Identities=14% Similarity=-0.051 Sum_probs=69.7
Q ss_pred EeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEe
Q 014742 77 WLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQ 156 (419)
Q Consensus 77 ~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~ 156 (419)
.+|+..+...+.... ...++.+++++....+-.-.+...+++.+..|+..+..+ ...++.+...++..++.+++..
T Consensus 187 ~~s~~~l~~~~~~~~---~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~ 262 (524)
T PRK06188 187 MGTHRSIATMAQIQL---AEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLA-KFDPAEVLRAIEEQRITATFLV 262 (524)
T ss_pred eeehHHHHHHHHHHH---hhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcC-CCCHHHHHHHHHHhCCEEEEeh
Confidence 467777776555433 345788899999888866555556777788888887765 4668889999999999999988
Q ss_pred CCChhhHhhcCc---cCCCCccEEEEecC
Q 014742 157 ENKIPSILSCLP---RCCLYLKTIVSFAN 182 (419)
Q Consensus 157 ~~~~~~~~~~~~---~~~~~~~~~~~~~~ 182 (419)
...+..+.+... .....++.++....
T Consensus 263 P~~l~~l~~~~~~~~~~l~~lr~~~~gg~ 291 (524)
T PRK06188 263 PTMIYALLDHPDLRTRDLSSLETVYYGAS 291 (524)
T ss_pred HHHHHHHHhCcCccCCCCcceeEEEEcCC
Confidence 766655544321 12234555555443
No 223
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=46.17 E-value=1.1e+02 Score=31.25 Aligned_cols=81 Identities=11% Similarity=-0.044 Sum_probs=64.4
Q ss_pred EeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEE
Q 014742 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (419)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l 316 (419)
.+|..++...+..+...+.. .++.++|++...++-.-. ....+++++..|+.++..+. ..+.+...+++.++..+
T Consensus 32 ~~Ty~el~~~~~~la~~L~~--~Gv~~gd~V~v~~~n~~~-~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i 108 (563)
T PLN02860 32 RRTGHEFVDGVLSLAAGLLR--LGLRNGDVVAIAALNSDL-YLEWLLAVACAGGIVAPLNYRWSFEEAKSAMLLVRPVML 108 (563)
T ss_pred eeeHHHHHHHHHHHHHHHHH--hCCCCCCEEEEEcCCCHH-HHHHHHHHhhccEEEEeCCcccCHHHHHHHHHhcCceEE
Confidence 58999999999888887744 378889999988776533 23347788889998887765 88999999999999999
Q ss_pred EecchH
Q 014742 317 SGVPRV 322 (419)
Q Consensus 317 ~~~P~~ 322 (419)
++.+..
T Consensus 109 ~~~~~~ 114 (563)
T PLN02860 109 VTDETC 114 (563)
T ss_pred EEeccc
Confidence 987654
No 224
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=46.15 E-value=23 Score=36.52 Aligned_cols=30 Identities=27% Similarity=0.433 Sum_probs=24.9
Q ss_pred CCceEEEEeCCCCCC-CCCeEEeechhHHHH
Q 014742 219 KTNISTIMYTSGTTG-EPKGVVLTNQAIVAE 248 (419)
Q Consensus 219 ~~~~~~i~~TSGtTG-~PK~V~~sh~~l~~~ 248 (419)
++.+.+...|||||| .+|-+.+|+..+-..
T Consensus 88 ~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~~ 118 (606)
T PLN02247 88 AQPITELLTSSGTSGGQPKLMPSTAEELDRK 118 (606)
T ss_pred CCCcceeeccCCCCCCceeEeeccHHHHHHH
Confidence 567788899999995 899999999876543
No 225
>PRK13390 acyl-CoA synthetase; Provisional
Probab=45.14 E-value=2.9e+02 Score=27.44 Aligned_cols=82 Identities=4% Similarity=-0.065 Sum_probs=63.4
Q ss_pred EEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeE
Q 014742 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (419)
Q Consensus 238 V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~ 315 (419)
..+|+..+...+..+...+.. .++.++|++...++-... .+..+++++..|+..+..+. .++.+...+...++..
T Consensus 23 ~~lTy~el~~~~~~la~~L~~--~gv~~gd~V~i~~~n~~~-~~~~~la~~~~Ga~~~~l~~~~~~~~~~~~~~~~~~~~ 99 (501)
T PRK13390 23 EQVSYRQLDDDSAALARVLYD--AGLRTGDVVALLSDNSPE-ALVVLWAALRSGLYITAINHHLTAPEADYIVGDSGARV 99 (501)
T ss_pred eEeeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEeCCCHH-HHHHHHHHHHhCCEEeccccCCCHHHHHHHHHhcCCcE
Confidence 369999999999998887643 367788998887666533 23347888999998887765 7888888999999998
Q ss_pred EEecchH
Q 014742 316 FSGVPRV 322 (419)
Q Consensus 316 l~~~P~~ 322 (419)
+......
T Consensus 100 ~i~~~~~ 106 (501)
T PRK13390 100 LVASAAL 106 (501)
T ss_pred EEEcchh
Confidence 8876544
No 226
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=44.41 E-value=1.6e+02 Score=29.36 Aligned_cols=87 Identities=2% Similarity=-0.132 Sum_probs=67.3
Q ss_pred EeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEE
Q 014742 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (419)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l 316 (419)
.+|...+...+..+...+.. .++.+++++....|-... .+..+++++..|+..+..+. ....+...+++.+++.+
T Consensus 11 ~~Ty~el~~~~~~la~~l~~--~g~~~g~~V~v~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 87 (509)
T PRK12406 11 RRSFDELAQRAARAAGGLAA--LGVRPGDCVALLMRNDFA-FFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVL 87 (509)
T ss_pred eecHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEE
Confidence 57888898888887776633 367788999888766533 23447788999999888765 78889999999999999
Q ss_pred EecchHHHHHHH
Q 014742 317 SGVPRVYDRIYT 328 (419)
Q Consensus 317 ~~~P~~~~~l~~ 328 (419)
++.......+.+
T Consensus 88 ~~~~~~~~~~~~ 99 (509)
T PRK12406 88 IAHADLLHGLAS 99 (509)
T ss_pred EEccchhhhhhh
Confidence 998877766544
No 227
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=44.35 E-value=2.1e+02 Score=24.74 Aligned_cols=90 Identities=14% Similarity=0.153 Sum_probs=0.0
Q ss_pred CCCcEEEEecCh--HHHHHHHH-HHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEEEecc------hHHHHHHHHHHH
Q 014742 264 SEEDTYFSFLPL--AHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVP------RVYDRIYTGISN 332 (419)
Q Consensus 264 ~~~d~~l~~~pl--~h~~g~~~-~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l~~~P------~~~~~l~~~~~~ 332 (419)
....+++...+- .|..|..+ ...-=..|..++.... .++.+.+.+++.+|+++...= .-+..+++.+++
T Consensus 82 ~~~~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~ 161 (197)
T TIGR02370 82 EVLGKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKE 161 (197)
T ss_pred CCCCeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHH
Q ss_pred HhhccCchHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEe---EEEEccCCCCHHHHHHH
Q 014742 333 KISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQ---AMLSGAAPLPIHVEEFL 403 (419)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr---~v~~~G~~l~~~~~~~~ 403 (419)
. .++ .+++||.+++++..+.+
T Consensus 162 ~--------------------------------------------------~~~~~v~i~vGG~~~~~~~~~~~ 185 (197)
T TIGR02370 162 E--------------------------------------------------GYRDSVKFMVGGAPVTQDWADKI 185 (197)
T ss_pred c--------------------------------------------------CCCCCCEEEEEChhcCHHHHHHh
No 228
>PRK07867 acyl-CoA synthetase; Validated
Probab=44.34 E-value=1.5e+02 Score=29.95 Aligned_cols=85 Identities=6% Similarity=-0.161 Sum_probs=64.4
Q ss_pred EeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEE
Q 014742 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (419)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l 316 (419)
.+|+..+...+..+...+... .+..+++++...++-. ......+++++..|+.++..+. .++.+...+++.++..+
T Consensus 28 ~~Ty~el~~~v~~lA~~L~~~-~~~~~~~~V~i~~~n~-~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l 105 (529)
T PRK07867 28 FTSWREHIRGSAARAAALRAR-LDPTRPPHVGVLLDNT-PEFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLV 105 (529)
T ss_pred EEeHHHHHHHHHHHHHHHHHh-hCCCCCCEEEEECCCC-HHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEE
Confidence 589999999999888877432 1355667777666643 2233347889999999987765 88899999999999999
Q ss_pred EecchHHHH
Q 014742 317 SGVPRVYDR 325 (419)
Q Consensus 317 ~~~P~~~~~ 325 (419)
++.......
T Consensus 106 i~~~~~~~~ 114 (529)
T PRK07867 106 LTESAHAEL 114 (529)
T ss_pred EECHhHHHH
Confidence 998876654
No 229
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=43.69 E-value=2.2e+02 Score=29.06 Aligned_cols=101 Identities=11% Similarity=0.062 Sum_probs=73.7
Q ss_pred CCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeC
Q 014742 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (419)
Q Consensus 219 ~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~ 298 (419)
.+..++ ++-+-.++. -.+|.+.|...+..+...+... .+. ++|++...+|..-- ....+++++..|+-.....
T Consensus 24 ~~~~ai-i~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~-~gv-kGDrV~iymp~~pe-~~~a~LA~~riGAI~~~vf 96 (528)
T COG0365 24 PDDTAI-IFDGEDGLF---RELTYGDLRREVARLANALKDL-GGV-KGDRVAIYMPNSPE-AVIALLATARIGAIPAVVS 96 (528)
T ss_pred CCceEE-EEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHh-CCC-CCCEEEEEcCCCHH-HHHHHHHHHHcCCEEeecc
Confidence 344444 444333333 6899999999998888877332 245 89999999998644 3345778888887766553
Q ss_pred C--CHHHHHHHhhhhcCeEEEecchHHHHH
Q 014742 299 G--DVRYLMEDIQELKPTMFSGVPRVYDRI 326 (419)
Q Consensus 299 ~--~~~~~~~~i~~~~~t~l~~~P~~~~~l 326 (419)
. .++.+..-|..-++.++++....++..
T Consensus 97 ~~f~~~al~~Ri~d~~~k~vit~d~~~~~g 126 (528)
T COG0365 97 PGLSAEAVADRIADLGPKVLIADDGTFRNG 126 (528)
T ss_pred cCCCHHHHHHHHHccCCCEEEEeccccccc
Confidence 3 999999999999999999888887754
No 230
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=43.39 E-value=1.6e+02 Score=29.93 Aligned_cols=87 Identities=8% Similarity=-0.024 Sum_probs=64.9
Q ss_pred EEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeE
Q 014742 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (419)
Q Consensus 238 V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~ 315 (419)
..+|...+...+..+...+... .++.++|++...++-.-. ....+++++..|+..+.... ..+.+...+++.++..
T Consensus 48 ~~~Ty~~l~~~~~~~a~~L~~~-~gi~~gd~V~i~~~n~~e-~~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~ 125 (562)
T PRK12492 48 VTLSYAELERHSAAFAAYLQQH-TDLVPGDRIAVQMPNVLQ-YPIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARA 125 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceE
Confidence 4689999998888887766221 157788998887665433 33447788999988887654 8899999999999999
Q ss_pred EEecchHHHHH
Q 014742 316 FSGVPRVYDRI 326 (419)
Q Consensus 316 l~~~P~~~~~l 326 (419)
+.+.+.+...+
T Consensus 126 ~i~~~~~~~~~ 136 (562)
T PRK12492 126 LVYLNMFGKLV 136 (562)
T ss_pred EEeccccchHH
Confidence 98877654443
No 231
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=43.11 E-value=2.3e+02 Score=26.27 Aligned_cols=67 Identities=9% Similarity=0.060 Sum_probs=46.9
Q ss_pred HHHHHhCCC-CCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCC
Q 014742 91 GSAMRSRGV-NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (419)
Q Consensus 91 a~~L~~~g~-~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (419)
...+.+.|. .+|+.|. ....+-.-..+.++|...|..+..+-|...+......++..++++++++..
T Consensus 46 ~~~a~~~g~~~~g~~vv-~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 46 IEDAEKRGLLKPGDTII-EATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPAE 113 (299)
T ss_pred HHHHHHcCCCCCCCEEE-EeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 334445553 6777664 445555555666788889987777766666667778899999999999865
No 232
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=42.17 E-value=2e+02 Score=30.38 Aligned_cols=88 Identities=11% Similarity=0.050 Sum_probs=67.9
Q ss_pred EEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeE
Q 014742 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (419)
Q Consensus 238 V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~ 315 (419)
..+|+..+...+..+...+.. .++.++|++...++-..- .+...++++..|+..+-... .++.+...|+..++..
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~~--lG~~~gd~Vai~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~ 181 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLVA--LGHNKEERVAIFADTRAE-WLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTT 181 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHHH--hCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCE
Confidence 468999999988888775532 377889998887764432 23347788999999887654 8899999999999999
Q ss_pred EEecchHHHHHHH
Q 014742 316 FSGVPRVYDRIYT 328 (419)
Q Consensus 316 l~~~P~~~~~l~~ 328 (419)
+++....+..+.+
T Consensus 182 li~~~~~~~~l~~ 194 (696)
T PLN02387 182 VICDSKQLKKLID 194 (696)
T ss_pred EEECHHHHHHHHH
Confidence 9998877766654
No 233
>PRK13382 acyl-CoA synthetase; Provisional
Probab=42.08 E-value=1.8e+02 Score=29.39 Aligned_cols=85 Identities=8% Similarity=-0.155 Sum_probs=66.0
Q ss_pred EeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEE
Q 014742 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (419)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l 316 (419)
.+|+..+...+..+...+.. .++.+++++...++-.-. .+..+++++..|+.++..+. ....+...+++.++..+
T Consensus 68 ~~Ty~el~~~~~~~A~~L~~--~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~v 144 (537)
T PRK13382 68 TLTWRELDERSDALAAALQA--LPIGEPRVVGIMCRNHRG-FVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTV 144 (537)
T ss_pred eecHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEecCcHH-HHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEE
Confidence 68999999888888876633 367788999888765433 23347888999999998865 77888999999999999
Q ss_pred EecchHHHHH
Q 014742 317 SGVPRVYDRI 326 (419)
Q Consensus 317 ~~~P~~~~~l 326 (419)
++...+...+
T Consensus 145 i~~~~~~~~~ 154 (537)
T PRK13382 145 IYDEEFSATV 154 (537)
T ss_pred EEchhhHHHH
Confidence 8877665544
No 234
>PRK06178 acyl-CoA synthetase; Validated
Probab=41.92 E-value=1.8e+02 Score=29.57 Aligned_cols=87 Identities=10% Similarity=0.023 Sum_probs=67.3
Q ss_pred EeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEE
Q 014742 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (419)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l 316 (419)
.+|+..+...+..+...+.. .++.+++++...++-... ....+++++..|+..+..+. ....+...+++.++..+
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~--~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~i 134 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQ--RGVGAGDRVAVFLPNCPQ-FHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVL 134 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCcH-HHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEE
Confidence 58999999988888776643 367788888877766544 33447788889998876654 78889999999999999
Q ss_pred EecchHHHHHHH
Q 014742 317 SGVPRVYDRIYT 328 (419)
Q Consensus 317 ~~~P~~~~~l~~ 328 (419)
++.+.....+.+
T Consensus 135 i~~~~~~~~l~~ 146 (567)
T PRK06178 135 LALDQLAPVVEQ 146 (567)
T ss_pred EEccchHHHHHH
Confidence 999887766543
No 235
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=41.88 E-value=2.7e+02 Score=27.02 Aligned_cols=33 Identities=9% Similarity=0.056 Sum_probs=20.9
Q ss_pred cCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeC
Q 014742 262 VCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (419)
Q Consensus 262 ~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~ 298 (419)
+++++|-++.. |+++.. ..-..++.|+..|+.+
T Consensus 70 ~ig~GDeVI~p-s~TfvA---Tan~i~~~Ga~PVFvD 102 (374)
T COG0399 70 AIGPGDEVIVP-SFTFVA---TANAVLLVGAKPVFVD 102 (374)
T ss_pred CCCCCCEEEec-CCchHH---HHHHHHHcCCeEEEEe
Confidence 46677766543 333332 2445688999999985
No 236
>PLN00011 cysteine synthase
Probab=41.34 E-value=2.6e+02 Score=26.34 Aligned_cols=70 Identities=7% Similarity=0.054 Sum_probs=48.3
Q ss_pred HHHHHHHHhCC-CCCC-CeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCC
Q 014742 88 IRFGSAMRSRG-VNPG-DRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (419)
Q Consensus 88 ~~la~~L~~~g-~~~g-d~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (419)
..+.....+.| +.+| +.|. ....+---..+.++|..+|..+..+-|..........++..++.+++++..
T Consensus 53 ~~~l~~a~~~g~~~~g~~~vv-~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 53 YSMIKDAEDKGLITPGKSTLI-EATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQS 124 (323)
T ss_pred HHHHHHHHHcCCCCCCCcEEE-EeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 33333444444 6777 5554 355555556667788889987776666555678888999999999999864
No 237
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=40.99 E-value=2.3e+02 Score=28.29 Aligned_cols=85 Identities=9% Similarity=-0.038 Sum_probs=64.7
Q ss_pred EeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHH-HHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeE
Q 014742 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQI-IETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (419)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~-~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~ 315 (419)
.+|+.++...+..+...+.. .+..+++++...++-. ..+. .+++++..|+..+..+. +...+...+++.+++.
T Consensus 30 ~~ty~~l~~~~~~~a~~L~~--~g~~~g~~v~l~~~~~--~~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~ 105 (508)
T TIGR02262 30 SLSYGELEAQVRRLGAALRR--LGVKREERVLLLMLDG--VDFPIAFLGAIRAGIVPVALNTLLTADDYAYMLEDSRARV 105 (508)
T ss_pred eeeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCC--HHHHHHHHHHHHcCcEEeeccCCCCHHHHHHHHHhcCCeE
Confidence 58999998888887776642 3677888887765544 3333 47788999999888765 8899999999999999
Q ss_pred EEecchHHHHHH
Q 014742 316 FSGVPRVYDRIY 327 (419)
Q Consensus 316 l~~~P~~~~~l~ 327 (419)
++........+.
T Consensus 106 ~i~~~~~~~~~~ 117 (508)
T TIGR02262 106 VFVSGELLPVIK 117 (508)
T ss_pred EEEchhhHHHHH
Confidence 998877665543
No 238
>PRK12582 acyl-CoA synthetase; Provisional
Probab=40.37 E-value=1.4e+02 Score=31.09 Aligned_cols=80 Identities=10% Similarity=-0.003 Sum_probs=60.9
Q ss_pred EEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--C-----HHHHHHHhhh
Q 014742 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--D-----VRYLMEDIQE 310 (419)
Q Consensus 238 V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~-----~~~~~~~i~~ 310 (419)
-.+|+..+...+..+...+.. .++.++|++...++-. .-....+++++..|+..+..+. . .+.+...++.
T Consensus 79 ~~~Ty~el~~~v~~lA~~L~~--~Gv~~gd~V~i~~~n~-~e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~ 155 (624)
T PRK12582 79 RKVTYGEAKRAVDALAQALLD--LGLDPGRPVMILSGNS-IEHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDL 155 (624)
T ss_pred EEeEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEecCCC-HHHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHh
Confidence 478999999999988886633 3778899999888743 3333457788999998887653 2 3788889999
Q ss_pred hcCeEEEecc
Q 014742 311 LKPTMFSGVP 320 (419)
Q Consensus 311 ~~~t~l~~~P 320 (419)
.++..+++..
T Consensus 156 ~~~~~vi~~~ 165 (624)
T PRK12582 156 VKPRVVFAQS 165 (624)
T ss_pred cCCcEEEecC
Confidence 9998888754
No 239
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=39.88 E-value=2.6e+02 Score=31.47 Aligned_cols=122 Identities=12% Similarity=0.003 Sum_probs=79.0
Q ss_pred CCCCCceeeeeccCCCCCcee--EeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCc--hhHHHHHHHHHHcCCeEEe
Q 014742 56 IPNNQMLGGRKVSDGKVGPYV--WLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNC--PEWIIAMEACNSQAITYVP 131 (419)
Q Consensus 56 ~pd~~ai~~~~~~~~~~~~~~--~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~--~~~~~~~lA~~~~G~~~vp 131 (419)
.+|.++.+... .|.++..+ .+|...+...+..... ..++.++|++...+|-. ..+....++.+..|+..+.
T Consensus 780 ~~~~~a~i~~T--SGTTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~ 854 (1146)
T PRK08633 780 KPDDTATIIFS--SGSEGEPKGVMLSHHNILSNIEQISD---VFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVY 854 (1146)
T ss_pred CCCCEEEEEEC--CCCCCCCceEEechHHHHHHHHHHHH---hcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEE
Confidence 45666665431 34444433 5688887766655443 34678899988777632 3334446777888988887
Q ss_pred eccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcC---ccCCCCccEEEEecC
Q 014742 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCL---PRCCLYLKTIVSFAN 182 (419)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 182 (419)
.....+.+.+...+++.++..+.........+.+.. ....+.++.++...+
T Consensus 855 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~ 908 (1146)
T PRK08633 855 HPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFASLRLVVAGAE 908 (1146)
T ss_pred eCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCCCeeeEEEcCC
Confidence 766678889999999999999999887666554421 122245555555444
No 240
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=39.44 E-value=1.4e+02 Score=29.71 Aligned_cols=80 Identities=9% Similarity=-0.014 Sum_probs=60.3
Q ss_pred EeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEE
Q 014742 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (419)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l 316 (419)
.+|+.++...+..+...+... +..+++++....+-... .+..+++++..|+..+..+. ..+.+...++..++..+
T Consensus 27 ~~t~~~l~~~~~~~a~~l~~~--g~~~~~~v~~~~~~~~~-~~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (503)
T PRK04813 27 KLTYGQLKEDSDALAAFIDSL--KLPDKSPIIVFGHMSPE-MLATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLI 103 (503)
T ss_pred EEeHHHHHHHHHHHHHHHHHh--CCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEE
Confidence 589999999988888766432 56678888877764432 33447788999998887765 77788888999999998
Q ss_pred Eecch
Q 014742 317 SGVPR 321 (419)
Q Consensus 317 ~~~P~ 321 (419)
++...
T Consensus 104 ~~~~~ 108 (503)
T PRK04813 104 IATEE 108 (503)
T ss_pred Eeccc
Confidence 87654
No 241
>PRK08308 acyl-CoA synthetase; Validated
Probab=39.11 E-value=3.6e+02 Score=25.99 Aligned_cols=119 Identities=10% Similarity=0.066 Sum_probs=76.0
Q ss_pred CCCCCceeeeeccCCCCCcee--EeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCch--hHHHHHHHHHHcCCeEEe
Q 014742 56 IPNNQMLGGRKVSDGKVGPYV--WLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCP--EWIIAMEACNSQAITYVP 131 (419)
Q Consensus 56 ~pd~~ai~~~~~~~~~~~~~~--~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~--~~~~~~lA~~~~G~~~vp 131 (419)
.++.++++... .|.++..+ .+|+..+...+..+... .++..+|++...+|-.- .++..++.++..|+..+.
T Consensus 99 ~~~~~~~i~~T--SGtTG~PKgv~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~ 173 (414)
T PRK08308 99 LAEEPSLLQYS--SGTTGEPKLIRRSWTEIDREIEAYNEA---LNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVI 173 (414)
T ss_pred CCCCceEEEEC--CCCCCCCcEEEEehHhHHHHHHHHHHh---hCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEe
Confidence 34556655431 34444433 57988887766655543 35678898887777543 335567888889988776
Q ss_pred eccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccCCCCccEEEEec
Q 014742 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFA 181 (419)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (419)
.. ..++..+...+++.++.+++.....+..+.+..... ..++.++...
T Consensus 174 ~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~-~~l~~~~~~G 221 (414)
T PRK08308 174 IT-NKNPKFALNILRNTPQHILYAVPLMLHILGRLLPGT-FQFHAVMTSG 221 (414)
T ss_pred cC-CCCHHHHHHHHHHhCCeEEEcCHHHHHHHHhcCCcc-ccccEEEEcc
Confidence 64 456778888999999999988877666554433221 2344444433
No 242
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=38.73 E-value=1.6e+02 Score=29.22 Aligned_cols=81 Identities=9% Similarity=0.032 Sum_probs=61.9
Q ss_pred EeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEE
Q 014742 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (419)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l 316 (419)
.+|+..+...+..+...+.. .++..++++....+-.-.+ ...+++++..|+..+..+. ..+.+...+++.++..+
T Consensus 25 ~~ty~el~~~~~~~a~~L~~--~g~~~~~~V~i~~~~~~~~-~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~i 101 (502)
T TIGR01734 25 ELTYQQLKEQSDRLAAFIQK--RILPKKSPIIVYGHMEPHM-LVAFLGSIKSGHAYIPVDTSIPSERIEMIIEAAGPELV 101 (502)
T ss_pred EEeHHHHHHHHHHHHHHHHH--hCCCCCCeEEEEeCCCHHH-HHHHHHHHHhCCEEeCCCCcChHHHHHHHHHhcCCCEE
Confidence 69999999999988887643 2566778887776665332 3347788999998777665 77788899999999999
Q ss_pred EecchH
Q 014742 317 SGVPRV 322 (419)
Q Consensus 317 ~~~P~~ 322 (419)
+.....
T Consensus 102 i~~~~~ 107 (502)
T TIGR01734 102 IHTAEL 107 (502)
T ss_pred Eecccc
Confidence 987654
No 243
>PRK06164 acyl-CoA synthetase; Validated
Probab=38.68 E-value=1.6e+02 Score=29.77 Aligned_cols=105 Identities=14% Similarity=0.068 Sum_probs=72.0
Q ss_pred CCCCCceeeeeccCCCCCcee--EeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCc-hhHHHHHHHHHHcCCeEEee
Q 014742 56 IPNNQMLGGRKVSDGKVGPYV--WLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNC-PEWIIAMEACNSQAITYVPL 132 (419)
Q Consensus 56 ~pd~~ai~~~~~~~~~~~~~~--~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~-~~~~~~~lA~~~~G~~~vpl 132 (419)
.++.++++... .|.++..+ .+|...+...+..+...+ ++.+++++...+|-. .-.+..+++++..|+..+..
T Consensus 179 ~~~~~~~i~~T--SGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~ 253 (540)
T PRK06164 179 DPDAGALLFTT--SGTTSGPKLVLHRQATLLRHARAIARAY---GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE 253 (540)
T ss_pred CCCceEEEEEC--CCCCCCCcEEEEehHHHHHHHHHHHHhc---CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec
Confidence 35667776531 34444333 568888876666555444 678999999888843 22344567888888887765
Q ss_pred ccCCChhHHHHHHhhcCceEEEEeCCChhhHhhc
Q 014742 133 YDTLGANAVEFIINHAEVSIAFVQENKIPSILSC 166 (419)
Q Consensus 133 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 166 (419)
+......+...+++.++..++.....+..+.+.
T Consensus 254 -~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~ 286 (540)
T PRK06164 254 -PVFDAARTARALRRHRVTHTFGNDEMLRRILDT 286 (540)
T ss_pred -CCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHh
Confidence 567788899999999999999887766655543
No 244
>PRK10595 SOS cell division inhibitor; Provisional
Probab=38.52 E-value=1.5e+02 Score=24.93 Aligned_cols=66 Identities=11% Similarity=-0.062 Sum_probs=45.2
Q ss_pred HHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeec--c-CCChhHHH---HHHhhcCceEEEEe
Q 014742 91 GSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLY--D-TLGANAVE---FIINHAEVSIAFVQ 156 (419)
Q Consensus 91 a~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~--~-~~~~~~l~---~~l~~~~~~~vi~~ 156 (419)
+.+|.+.|+..+..+.+...+..+.+.++-=|++.|..-+.+- + ..+.++++ ..-+..++-.++.-
T Consensus 70 ~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~aVL~Wlp~~l~~~~~RRLQlAAe~g~~l~fl~R 141 (164)
T PRK10595 70 REWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVLGWLPDELTEEEHARLVDAAQEGNAMGFIMR 141 (164)
T ss_pred HHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcEEEECCcccCCHHHHHHHHHHHHhCCCEEEEEe
Confidence 6789999998888888878888899999999999986433332 4 66655543 33444444444443
No 245
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=38.49 E-value=2.6e+02 Score=26.31 Aligned_cols=64 Identities=8% Similarity=-0.040 Sum_probs=46.2
Q ss_pred HHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCC
Q 014742 94 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (419)
Q Consensus 94 L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (419)
+.+.|..+++.|.... .+-.-..+.++|...|..++.+-|..........++..++++++++..
T Consensus 43 a~~~g~~~~~~vv~aS-sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~ 106 (316)
T cd06448 43 SAKQGLNECVHVVCSS-GGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGKV 106 (316)
T ss_pred HHHhhcccCCeEEEeC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCc
Confidence 3344444566665544 344445667788899998887777777788899999999999999865
No 246
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=38.43 E-value=2e+02 Score=29.15 Aligned_cols=85 Identities=5% Similarity=-0.188 Sum_probs=64.5
Q ss_pred EeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEE
Q 014742 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (419)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l 316 (419)
.+|+..+...+..+...+.. .++..++++...++-.-. .+..+++++..|+..+.... ....+...+++.++..+
T Consensus 42 ~~ty~~l~~~~~~~a~~L~~--~g~~~g~~V~i~~~~~~~-~~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i 118 (542)
T PRK07786 42 TTTWRELDDRVAALAGALSR--RGVGFGDRVLILMLNRTE-FVESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVV 118 (542)
T ss_pred cccHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEE
Confidence 68999999888888776643 367778888777664332 23347788999999887764 78889999999999999
Q ss_pred EecchHHHHH
Q 014742 317 SGVPRVYDRI 326 (419)
Q Consensus 317 ~~~P~~~~~l 326 (419)
+..+.....+
T Consensus 119 i~~~~~~~~~ 128 (542)
T PRK07786 119 VTEAALAPVA 128 (542)
T ss_pred EEccchHHHH
Confidence 8887765443
No 247
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=38.03 E-value=1.9e+02 Score=27.78 Aligned_cols=66 Identities=14% Similarity=0.037 Sum_probs=41.7
Q ss_pred HHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeecc-----CCChhHHHHHHhh---cCceEEEEe
Q 014742 88 IRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD-----TLGANAVEFIINH---AEVSIAFVQ 156 (419)
Q Consensus 88 ~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~-----~~~~~~l~~~l~~---~~~~~vi~~ 156 (419)
..+...+...++++||.|.+-.+. +....-++...|+.++.++. ..+.+.+...++. -++++|+..
T Consensus 55 ~al~~~l~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~ 128 (380)
T TIGR03588 55 SALHIACLALGVGPGDRVWTTPIT---FVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPV 128 (380)
T ss_pred HHHHHHHHHcCCCCCCEEEeCCcc---hHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEe
Confidence 334444555678899997776654 44445667788987776644 2466777777763 355666643
No 248
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=37.94 E-value=1.6e+02 Score=28.42 Aligned_cols=61 Identities=16% Similarity=0.209 Sum_probs=37.4
Q ss_pred HHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccC-----CChhHHHHHHhhcCceEEE
Q 014742 90 FGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT-----LGANAVEFIINHAEVSIAF 154 (419)
Q Consensus 90 la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~-----~~~~~l~~~l~~~~~~~vi 154 (419)
+...|...++++||.|.+-.+ .|.....++...|+.++.++.+ .+.+.+...+.. +.++|+
T Consensus 61 l~lal~al~~~~Gd~Viv~~~---~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 61 MHITLMALGIGPGDEVITPSL---TWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHHHcCCCCCCEEEECCC---cHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 334455567788998776544 3444455667788888766532 355666666643 456665
No 249
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=37.92 E-value=3.1e+02 Score=26.90 Aligned_cols=66 Identities=9% Similarity=-0.060 Sum_probs=51.2
Q ss_pred CCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEee--ccCCChhHHHHHHhhcCceEEEEeCCChhhH
Q 014742 98 GVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPL--YDTLGANAVEFIINHAEVSIAFVQENKIPSI 163 (419)
Q Consensus 98 g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl--~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 163 (419)
.--.|-+|+.+.+=.++-...+..+..+|+-+... ||..+.++....|...+..+.-......+..
T Consensus 28 ~pl~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a~~~~~~~ey 95 (406)
T TIGR00936 28 KPLKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFAWRGETNEEY 95 (406)
T ss_pred CCCCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEEecCCCHHHH
Confidence 33468999999999999999999999999977766 7777888899999888877555444444433
No 250
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=37.35 E-value=3.4e+02 Score=25.11 Aligned_cols=66 Identities=12% Similarity=0.078 Sum_probs=46.4
Q ss_pred HHHHhCC-CCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCC
Q 014742 92 SAMRSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (419)
Q Consensus 92 ~~L~~~g-~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (419)
....+.| +.+|+.|.- ...+---..+.++|...|..+..+-|..........++..++++++++..
T Consensus 48 ~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~ 114 (290)
T TIGR01138 48 VEAEKRGEIKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELILVTKE 114 (290)
T ss_pred HHHHHcCCCCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 3344445 467776654 44444556667788889997777766666677778899999999999863
No 251
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=37.09 E-value=4.9e+02 Score=26.86 Aligned_cols=103 Identities=13% Similarity=0.037 Sum_probs=73.5
Q ss_pred CCceEEEEeC--CCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEE
Q 014742 219 KTNISTIMYT--SGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGF 296 (419)
Q Consensus 219 ~~~~~~i~~T--SGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl 296 (419)
++.++++... .++.|. ...+|+..+...+..+...+.. .+.++|++...++-... .+..+++++..|+..+.
T Consensus 48 ~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~---~~~~gd~V~l~~~n~~e-~~~~~lA~~~aG~v~vp 121 (612)
T PRK12476 48 GDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQ---VAGPGDRVAILAPQGID-YVAGFFAAIKAGTIAVP 121 (612)
T ss_pred CCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHH---hcCCCCEEEEECCCChh-HHHHHHHHHHcCceeEe
Confidence 5666765432 112232 3468999999999998887743 26788999888877633 23347788999998876
Q ss_pred e-CC----CHHHHHHHhhhhcCeEEEecchHHHHHH
Q 014742 297 W-RG----DVRYLMEDIQELKPTMFSGVPRVYDRIY 327 (419)
Q Consensus 297 ~-~~----~~~~~~~~i~~~~~t~l~~~P~~~~~l~ 327 (419)
. +. ..+.+...++..++..+++.+.....+.
T Consensus 122 l~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~ 157 (612)
T PRK12476 122 LFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVE 157 (612)
T ss_pred cCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHH
Confidence 5 22 2678889999999999999887766553
No 252
>PRK06060 acyl-CoA synthetase; Validated
Probab=36.79 E-value=2.1e+02 Score=30.24 Aligned_cols=83 Identities=13% Similarity=0.089 Sum_probs=62.9
Q ss_pred EeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEE
Q 014742 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (419)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l 316 (419)
.+|+..+...+..+...+.. .++.+++++...++-... .+..+++++..|+..+..+. ....+...++..++.++
T Consensus 30 ~~Ty~eL~~~~~~lA~~L~~--~g~~~g~~V~i~~~~~~~-~~~~~la~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~v 106 (705)
T PRK06060 30 VVTHGQIHDGAARLGEVLRN--RGLSSGDRVLLCLPDSPD-LVQLLLACLARGVMAFLANPELHRDDHALAARNTEPALV 106 (705)
T ss_pred ceeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCHH-HHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEE
Confidence 48999999999888887744 367788999888776543 23347788999998777654 67788888889999988
Q ss_pred EecchHHH
Q 014742 317 SGVPRVYD 324 (419)
Q Consensus 317 ~~~P~~~~ 324 (419)
........
T Consensus 107 i~~~~~~~ 114 (705)
T PRK06060 107 VTSDALRD 114 (705)
T ss_pred EEchHHhh
Confidence 87665443
No 253
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=36.71 E-value=5.2e+02 Score=27.10 Aligned_cols=85 Identities=6% Similarity=-0.104 Sum_probs=64.3
Q ss_pred EEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeE
Q 014742 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (419)
Q Consensus 238 V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~ 315 (419)
..+|+..+...+..+...+.. .++.++|++...++-..- .+...++++..|+..+-... .++.+...+...+++.
T Consensus 75 ~~~Ty~el~~~v~~lA~~L~~--~Gv~~gd~V~i~~~n~~e-w~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~ 151 (660)
T PLN02430 75 MWKTYKEVYEEVLQIGSALRA--SGAEPGSRVGIYGSNCPQ-WIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDF 151 (660)
T ss_pred EEEEHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCE
Confidence 357999999999888876643 378889998887766433 22346788999988876654 8899999999999999
Q ss_pred EEecchHHHH
Q 014742 316 FSGVPRVYDR 325 (419)
Q Consensus 316 l~~~P~~~~~ 325 (419)
+++....+..
T Consensus 152 v~~~~~~~~~ 161 (660)
T PLN02430 152 VFVQDKKIKE 161 (660)
T ss_pred EEECHHHHHH
Confidence 9987654433
No 254
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=36.23 E-value=1.9e+02 Score=29.46 Aligned_cols=84 Identities=13% Similarity=0.014 Sum_probs=64.1
Q ss_pred EeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEE
Q 014742 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (419)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l 316 (419)
.+|...+...+..+...+.. .++..+|++...++-..- .+...++++..|+..+..+. ..+.+...++..+++.+
T Consensus 49 ~~ty~eL~~~~~~la~~L~~--~gv~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~i 125 (563)
T PRK06710 49 DITFSVFHDKVKRFANYLQK--LGVEKGDRVAIMLPNCPQ-AVIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVI 125 (563)
T ss_pred eecHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCChH-HHHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEE
Confidence 58999999998888887633 367778998888776544 23457888999988776654 78888899999999999
Q ss_pred EecchHHHH
Q 014742 317 SGVPRVYDR 325 (419)
Q Consensus 317 ~~~P~~~~~ 325 (419)
...+.....
T Consensus 126 i~~~~~~~~ 134 (563)
T PRK06710 126 LCLDLVFPR 134 (563)
T ss_pred EEeccchhh
Confidence 888765443
No 255
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=35.90 E-value=1.6e+02 Score=29.16 Aligned_cols=55 Identities=11% Similarity=0.179 Sum_probs=34.8
Q ss_pred CCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccC-----CChhHHHHHHhhcCceEEEEe
Q 014742 98 GVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT-----LGANAVEFIINHAEVSIAFVQ 156 (419)
Q Consensus 98 g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~-----~~~~~l~~~l~~~~~~~vi~~ 156 (419)
++++||.|.+-.+. |.....++...|+.+++++.+ .+.+.+...+.. +.++|++.
T Consensus 107 ~~~pGd~VIv~~~t---~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 107 ALKPGDEVITVAAG---FPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred CCCCCCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 78889988766544 344455666788887766543 345666666643 55666654
No 256
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=35.52 E-value=44 Score=23.47 Aligned_cols=19 Identities=32% Similarity=0.459 Sum_probs=15.4
Q ss_pred HHHHHHhCCCCCCCeEEEE
Q 014742 90 FGSAMRSRGVNPGDRCGIY 108 (419)
Q Consensus 90 la~~L~~~g~~~gd~V~l~ 108 (419)
+-..|+++|+++||.|-|.
T Consensus 45 v~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 45 VEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred HHHHHHHcCCCCCCEEEEc
Confidence 4456788999999999875
No 257
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=35.37 E-value=2.6e+02 Score=28.34 Aligned_cols=86 Identities=9% Similarity=0.021 Sum_probs=65.1
Q ss_pred EeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEE
Q 014742 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (419)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l 316 (419)
.+|+..+...+..+...+.. ..++.++|++...++-.-. ....+++++..|+..+..+. ....+...+++.+++.+
T Consensus 50 ~~Ty~el~~~~~~la~~L~~-~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~v 127 (560)
T PRK08751 50 TITYREADQLVEQFAAYLLG-ELQLKKGDRVALMMPNCLQ-YPIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVL 127 (560)
T ss_pred eeeHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEECCCCHH-HHHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEE
Confidence 58999999888887776521 1377888998888766533 23347888999999987654 78888999999999999
Q ss_pred EecchHHHHH
Q 014742 317 SGVPRVYDRI 326 (419)
Q Consensus 317 ~~~P~~~~~l 326 (419)
+........+
T Consensus 128 i~~~~~~~~~ 137 (560)
T PRK08751 128 VVIDNFGTTV 137 (560)
T ss_pred EEcchhHHHH
Confidence 9887765544
No 258
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=35.25 E-value=97 Score=23.81 Aligned_cols=41 Identities=10% Similarity=0.108 Sum_probs=32.5
Q ss_pred HHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCe
Q 014742 88 IRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAIT 128 (419)
Q Consensus 88 ~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 128 (419)
..+...+...|+.+++.|.++|.++.....+.+.+..+|..
T Consensus 64 ~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~~ 104 (118)
T cd01449 64 EELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGYK 104 (118)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 34556677788889999999999988777777778888863
No 259
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=35.22 E-value=38 Score=23.77 Aligned_cols=20 Identities=30% Similarity=0.524 Sum_probs=12.8
Q ss_pred HHHHHHHHhCCCCCCCeEEE
Q 014742 88 IRFGSAMRSRGVNPGDRCGI 107 (419)
Q Consensus 88 ~~la~~L~~~g~~~gd~V~l 107 (419)
.-+-..|+++|+++||.|-|
T Consensus 43 ~Gv~~~L~~~G~~~GD~V~I 62 (69)
T PF09269_consen 43 MGVEKALRKAGAKEGDTVRI 62 (69)
T ss_dssp TTHHHHHHTTT--TT-EEEE
T ss_pred CCHHHHHHHcCCCCCCEEEE
Confidence 33456688899999999976
No 260
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=34.86 E-value=2.2e+02 Score=23.00 Aligned_cols=58 Identities=7% Similarity=-0.140 Sum_probs=0.0
Q ss_pred CCCCCeEEEEcC---CchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEe
Q 014742 99 VNPGDRCGIYGS---NCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQ 156 (419)
Q Consensus 99 ~~~gd~V~l~~~---n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~ 156 (419)
.+++..|..+.+ +..........+...|.-++-+..+.+.+++.....+.+|++|..+
T Consensus 1 ~~~~~vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS 61 (137)
T PRK02261 1 MKKKTVVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVS 61 (137)
T ss_pred CCCCEEEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEc
No 261
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=34.78 E-value=3.1e+02 Score=27.70 Aligned_cols=103 Identities=14% Similarity=0.021 Sum_probs=69.6
Q ss_pred CCCCceeeeeccCCCCCce--eEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHH---HHHHHHHHcCCeEEe
Q 014742 57 PNNQMLGGRKVSDGKVGPY--VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWI---IAMEACNSQAITYVP 131 (419)
Q Consensus 57 pd~~ai~~~~~~~~~~~~~--~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~---~~~lA~~~~G~~~vp 131 (419)
++.++++... .|.++.. ..+|...+...+..... ..++.++|++...+|-.-.+- ...++++..|+..+.
T Consensus 181 ~~~~a~i~~T--SGTTG~PKgV~~s~~~l~~~~~~~~~---~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~ 255 (536)
T PRK10946 181 ADEVAFFQLS--GGSTGTPKLIPRTHNDYYYSVRRSVE---ICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVL 255 (536)
T ss_pred CCCeEEEEeC--CCCCCCCcEEEEehHHHHHHHHHHHH---hcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEE
Confidence 4556555331 4444443 35688888887665443 347889999988877543332 246788888988775
Q ss_pred eccCCChhHHHHHHhhcCceEEEEeCCChhhHhh
Q 014742 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILS 165 (419)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 165 (419)
. +..........++..++.++......+..+.+
T Consensus 256 ~-~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~ 288 (536)
T PRK10946 256 A-PDPSATLCFPLIEKHQVNVTALVPPAVSLWLQ 288 (536)
T ss_pred C-CCCCHHHHHHHHHHhCCcEEEeChHHHHHHHh
Confidence 5 44567778889999999999988776655544
No 262
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=34.29 E-value=3.3e+02 Score=28.89 Aligned_cols=122 Identities=11% Similarity=-0.012 Sum_probs=74.2
Q ss_pred CCCCCceeeeeccCCCCCcee--EeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCC--chhHHHHHHHHHHcCCeEEe
Q 014742 56 IPNNQMLGGRKVSDGKVGPYV--WLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSN--CPEWIIAMEACNSQAITYVP 131 (419)
Q Consensus 56 ~pd~~ai~~~~~~~~~~~~~~--~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n--~~~~~~~~lA~~~~G~~~vp 131 (419)
.+|.++++... .|.++..+ .+|+..+...+..+.. ..++.++|++...+|- ...+...+++.+..|+..+.
T Consensus 363 ~~~d~a~i~~T--SGTTG~PKgv~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~ 437 (718)
T PRK08043 363 QPEDAALILFT--SGSEGHPKGVVHSHKSLLANVEQIKT---IADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFL 437 (718)
T ss_pred CCCCeEEEEEC--CCCCCCCCEEEEcHHHHHHHHHHHHH---hhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEE
Confidence 34666665431 44444433 5788888776655443 3478899999888874 33444557788889998886
Q ss_pred eccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCc-cCCCCccEEEEecC
Q 014742 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLP-RCCLYLKTIVSFAN 182 (419)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 182 (419)
.+.......+...+++.++..++..........+... .....++.++....
T Consensus 438 ~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~lr~i~~gg~ 489 (718)
T PRK08043 438 YPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFANPYDFARLRYVVAGAE 489 (718)
T ss_pred eCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhcCcccccceEEEEEeCc
Confidence 6544455667778888888888766544433322211 12244555555444
No 263
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=34.19 E-value=2.4e+02 Score=27.70 Aligned_cols=82 Identities=13% Similarity=-0.061 Sum_probs=62.4
Q ss_pred EEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeE
Q 014742 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (419)
Q Consensus 238 V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~ 315 (419)
..+|+..+...+..+...+... ++.++|++....+-... .+..+++++..|+..+..+. ..+.+...+++.++..
T Consensus 27 ~~~ty~el~~~~~~~a~~L~~~--g~~~~~~v~l~~~~~~~-~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ 103 (458)
T PRK09029 27 EVLTWQQLCARIDQLAAGFAQQ--GVVEGSGVALRGKNSPE-TLLAYLALLQCGARVLPLNPQLPQPLLEELLPSLTLDF 103 (458)
T ss_pred cceeHHHHHHHHHHHHHHHHHc--CCCCCCEEEEecCCCHH-HHHHHHHHHHcCCEEeecCCCCCHHHHHHHHHhcCCCE
Confidence 3589999999998888876442 67788888877666433 33447888999999998865 7788888899999988
Q ss_pred EEecchH
Q 014742 316 FSGVPRV 322 (419)
Q Consensus 316 l~~~P~~ 322 (419)
+......
T Consensus 104 ~i~~~~~ 110 (458)
T PRK09029 104 ALVLEGE 110 (458)
T ss_pred EEEcCcc
Confidence 8776543
No 264
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=33.83 E-value=3.3e+02 Score=26.95 Aligned_cols=67 Identities=10% Similarity=-0.020 Sum_probs=46.7
Q ss_pred HHHHHhCCC-CCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCC
Q 014742 91 GSAMRSRGV-NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (419)
Q Consensus 91 a~~L~~~g~-~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (419)
.....+.|. .+|+.|.-. ..+---..+.++|...|..+..+-|.....+....++..++++++++..
T Consensus 50 l~~a~~~g~~~~g~~vv~~-ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~ 117 (454)
T TIGR01137 50 IEDAEASGRLKPGDTIIEP-TSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPTA 117 (454)
T ss_pred HHHHHHcCCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHHHHHHCCCEEEEcCCc
Confidence 333444454 677765444 4455556667788889997776666656677788899999999999753
No 265
>PRK09192 acyl-CoA synthetase; Validated
Probab=33.81 E-value=3.2e+02 Score=27.97 Aligned_cols=88 Identities=9% Similarity=-0.099 Sum_probs=66.6
Q ss_pred eEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC---------CHHHHHHH
Q 014742 237 GVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG---------DVRYLMED 307 (419)
Q Consensus 237 ~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~---------~~~~~~~~ 307 (419)
.-.+|...+...+..+...+.. .++.++|++...++-.- ..+...++++..|+..+..+. ..+.+...
T Consensus 47 ~~~~Ty~eL~~~~~~~a~~L~~--~gi~~gd~V~l~~~n~~-~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~ 123 (579)
T PRK09192 47 EEALPYQTLRARAEAGARRLLA--LGLKPGDRVALIAETDG-DFVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGM 123 (579)
T ss_pred EEEecHHHHHHHHHHHHHHHHH--hCCCCCCEEEEEcCCch-hHHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHH
Confidence 3579999999888888887643 37788999998887743 234457788999999888742 15788899
Q ss_pred hhhhcCeEEEecchHHHHHH
Q 014742 308 IQELKPTMFSGVPRVYDRIY 327 (419)
Q Consensus 308 i~~~~~t~l~~~P~~~~~l~ 327 (419)
+++.++..+.........+.
T Consensus 124 i~~~~~~~il~~~~~~~~~~ 143 (579)
T PRK09192 124 LASAQPAAIITPDELLPWVN 143 (579)
T ss_pred HHhcCCCEEEeChHHHHHHH
Confidence 99999999988876655443
No 266
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=33.31 E-value=3.1e+02 Score=29.41 Aligned_cols=106 Identities=15% Similarity=0.179 Sum_probs=74.5
Q ss_pred CCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhc-CccCCCC-----------cEEEEecChHHHHHHHHHHH
Q 014742 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVT-GKVCSEE-----------DTYFSFLPLAHIYDQIIETH 286 (419)
Q Consensus 219 ~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~-~~~~~~~-----------d~~l~~~pl~h~~g~~~~l~ 286 (419)
++.++++.... |.+ -..+|++.+...+..+...+... ..++.++ |++...++-. .-.+...++
T Consensus 75 p~~~Al~~~~~---g~~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~-~ew~~~~lA 149 (746)
T PTZ00342 75 NNKIAIVEHSC---GEP-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNS-INWLVADLA 149 (746)
T ss_pred CCceeEeccCC---CCC-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCC-HHHHHHHHH
Confidence 56667653322 211 24689999999999888877321 1256665 7787776543 223334778
Q ss_pred HHhcCceEEEeCC--CHHHHHHHhhhhcCeEEEecchHHHHHHHH
Q 014742 287 CIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTG 329 (419)
Q Consensus 287 ~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~ 329 (419)
++..|+..+-... .++.+...++.-++.++++.+..+..+.+.
T Consensus 150 ~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~ 194 (746)
T PTZ00342 150 CMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLER 194 (746)
T ss_pred HHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHh
Confidence 8999999887754 899999999999999999988777776543
No 267
>PRK10717 cysteine synthase A; Provisional
Probab=33.21 E-value=3.8e+02 Score=25.29 Aligned_cols=64 Identities=13% Similarity=0.130 Sum_probs=45.0
Q ss_pred HHhCC-CCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCC
Q 014742 94 MRSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (419)
Q Consensus 94 L~~~g-~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (419)
..+.| +++|+.|.- ...+---..+.++|...|..+..+-|....+.....++..++++++++..
T Consensus 55 a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~~~~~~GA~V~~~~~~ 119 (330)
T PRK10717 55 AEKRGLLKPGGTIVE-GTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDLLRALGAELVLVPAA 119 (330)
T ss_pred HHHcCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCc
Confidence 33445 466776544 44444555666788889987766666666677889999999999999864
No 268
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=33.11 E-value=2.3e+02 Score=28.55 Aligned_cols=79 Identities=10% Similarity=-0.030 Sum_probs=61.3
Q ss_pred EeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHH-HHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeE
Q 014742 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQI-IETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (419)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~-~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~ 315 (419)
.+|+..+...+..+...+.. .++.+++++...++-. ..+. .+++++..|+..+.... ..+.+...+++.++..
T Consensus 48 ~~Ty~el~~~~~~~a~~L~~--~g~~~g~~V~i~~~~~--~~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ 123 (527)
T TIGR02275 48 QWSYRELDQRADNLAAGLTK--LGIGQGDTAVVQLPNI--AEFYIVFFALLKLGIAPVLALFSHRKSELTAYAQQIEPAL 123 (527)
T ss_pred eecHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCc--HHHHHHHHHHHHcCeEEeccccccCHHHHHHHHHhcCCcE
Confidence 68999999999888886643 3677889988876554 3333 47788999998776543 7888999999999999
Q ss_pred EEecch
Q 014742 316 FSGVPR 321 (419)
Q Consensus 316 l~~~P~ 321 (419)
+...+.
T Consensus 124 li~~~~ 129 (527)
T TIGR02275 124 YIIDRA 129 (527)
T ss_pred EEEcCc
Confidence 988765
No 269
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=33.00 E-value=1.9e+02 Score=26.85 Aligned_cols=66 Identities=12% Similarity=0.089 Sum_probs=54.4
Q ss_pred CCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEE-eeccCCChhHHHHHHhhcCceEEEEeCCChhhH
Q 014742 98 GVNPGDRCGIYGSNCPEWIIAMEACNSQAITYV-PLYDTLGANAVEFIINHAEVSIAFVQENKIPSI 163 (419)
Q Consensus 98 g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v-pl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 163 (419)
.+++||.|+=-..||.--...+--|-..|+-.+ .+..+-..+++...|+..+++-||++++..+.-
T Consensus 157 ~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~ 223 (354)
T KOG0025|consen 157 QLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRK 223 (354)
T ss_pred hcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchh
Confidence 467899999999999888788888888887555 556666789999999999999999998876543
No 270
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=32.72 E-value=2.4e+02 Score=28.50 Aligned_cols=79 Identities=9% Similarity=0.034 Sum_probs=61.4
Q ss_pred EeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEE
Q 014742 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (419)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l 316 (419)
.+|+..+...+..+...+.. .++.++|++...++-... .....++++..|+.++..+. ....+...++..++..+
T Consensus 46 ~~ty~el~~~~~~~a~~L~~--~gi~~g~~V~i~~~~~~~-~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~v 122 (541)
T TIGR03205 46 PITYTELEAMAETAAAALLR--AGYGKDASVALYLGNTPD-HPINFFGALKAGARVVHLSPLDGERALSHKLSDSGARLL 122 (541)
T ss_pred EeeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCChH-HHHHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEE
Confidence 68999999888888776633 367889999888775432 33447788888998887654 88899999999999999
Q ss_pred Eecc
Q 014742 317 SGVP 320 (419)
Q Consensus 317 ~~~P 320 (419)
++..
T Consensus 123 i~~~ 126 (541)
T TIGR03205 123 ITSD 126 (541)
T ss_pred EEeC
Confidence 8765
No 271
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=32.63 E-value=4e+02 Score=24.51 Aligned_cols=66 Identities=9% Similarity=0.113 Sum_probs=46.8
Q ss_pred HHHhCCC-CCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCC
Q 014742 93 AMRSRGV-NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK 159 (419)
Q Consensus 93 ~L~~~g~-~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~ 159 (419)
.+.+.|. ++|+.|.. ...+-.-..+.++|...|..+..+-|..........++..++++++++...
T Consensus 43 ~a~~~g~~~~~~~vv~-~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 43 DAEKRGLLKPGTTIIE-PTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEAE 109 (291)
T ss_pred HHHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCCC
Confidence 3444453 35666544 455555566677888999977777666666777789999999999998764
No 272
>PRK00865 glutamate racemase; Provisional
Probab=31.88 E-value=2.4e+02 Score=25.70 Aligned_cols=57 Identities=14% Similarity=0.147 Sum_probs=46.9
Q ss_pred HHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcC
Q 014742 48 FFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGS 110 (419)
Q Consensus 48 ~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~ 110 (419)
++....+..|+...+++- |....++-..|-.++.+++.++...|.+.|. |.|.+-|.
T Consensus 20 vl~~i~~~lp~~~~iY~~---D~~~~PYG~ks~~~i~~~~~~~~~~L~~~g~---d~iVIaCN 76 (261)
T PRK00865 20 VLREIRRLLPDEHIIYVG---DTARFPYGEKSEEEIRERTLEIVEFLLEYGV---KMLVIACN 76 (261)
T ss_pred HHHHHHHHCCCCCEEEEe---cCCCCCCCCCCHHHHHHHHHHHHHHHHhCCC---CEEEEeCc
Confidence 467777789999999988 8888888889999999999999999998764 45555544
No 273
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=31.72 E-value=3.9e+02 Score=28.27 Aligned_cols=89 Identities=3% Similarity=-0.066 Sum_probs=68.3
Q ss_pred CeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHH-HHHHHHhcCceEEEeCC--CHHHHHHHhhhhc
Q 014742 236 KGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQI-IETHCIHKGCSIGFWRG--DVRYLMEDIQELK 312 (419)
Q Consensus 236 K~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~-~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~ 312 (419)
....+|++.+...+..+...+.. .++.++|++...++-. ..+. ..++++..|+..+-... .++.+...++..+
T Consensus 118 ~~~~lTy~el~~~~~~lA~~L~~--~Gv~~gd~V~i~~~n~--~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~ 193 (700)
T PTZ00216 118 ETRYITYAELWERIVNFGRGLAE--LGLTKGSNVAIYEETR--WEWLASIYGIWSQSMVAATVYANLGEDALAYALRETE 193 (700)
T ss_pred CceEeEHHHHHHHHHHHHHHHHH--hCCCCCCEEEEEcCCC--HHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccC
Confidence 35689999999999998887643 3778899998887754 3343 47788888988776543 8888899999999
Q ss_pred CeEEEecchHHHHHHH
Q 014742 313 PTMFSGVPRVYDRIYT 328 (419)
Q Consensus 313 ~t~l~~~P~~~~~l~~ 328 (419)
+..+++....+..+.+
T Consensus 194 ~~~lv~~~~~~~~l~~ 209 (700)
T PTZ00216 194 CKAIVCNGKNVPNLLR 209 (700)
T ss_pred ccEEEECHHHHHHHHH
Confidence 9999988776665544
No 274
>TIGR00067 glut_race glutamate racemase. The most closely related proteins differing in function are aspartate racemases.
Probab=31.71 E-value=1.7e+02 Score=26.52 Aligned_cols=60 Identities=12% Similarity=0.128 Sum_probs=48.0
Q ss_pred HHHHHHHhCCCCCceeeeeccCCCCCceeEeeHHHHHHHHHHHHHHHH-hCCCCCCCeEEEEcCCchh
Q 014742 48 FFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMR-SRGVNPGDRCGIYGSNCPE 114 (419)
Q Consensus 48 ~l~~~a~~~pd~~ai~~~~~~~~~~~~~~~~Ty~el~~~~~~la~~L~-~~g~~~gd~V~l~~~n~~~ 114 (419)
++....+..|+...+++- |...-++-..|-+++.+.+.+.+..|. +.|+ |.|++-| |+..
T Consensus 13 v~~~l~~~~p~~~~iy~~---D~~~~PYG~ks~~~i~~~~~~~~~~L~~~~g~---d~ivIaC-NTA~ 73 (251)
T TIGR00067 13 VLKEIRKQLPKEHYIYVG---DTKRFPYGEKSPEFILEYVLELLTFLKERHNI---KLLVVAC-NTAS 73 (251)
T ss_pred HHHHHHHHCCCCCEEEEe---cCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCC---CEEEEeC-chHH
Confidence 467777788999999988 888888888999999999999999999 8776 4444444 4544
No 275
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=31.62 E-value=1.3e+02 Score=22.40 Aligned_cols=53 Identities=13% Similarity=0.014 Sum_probs=37.6
Q ss_pred eEeeHHHHHHH----HHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCe
Q 014742 76 VWLTYQEVYDA----AIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAIT 128 (419)
Q Consensus 76 ~~~Ty~el~~~----~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 128 (419)
..+.+.++... ...+...+...++.+++.|.+++.++.....+...+...|.-
T Consensus 36 ~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 36 INIPLSSLPDALALSEEEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred EEechHHhhhhhCCCHHHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 34566665433 234566666778888999999999988777777777888863
No 276
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=31.58 E-value=3.6e+02 Score=30.92 Aligned_cols=123 Identities=8% Similarity=0.015 Sum_probs=78.2
Q ss_pred CCCCCceeeeeccCCCCCcee--EeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhH-HHHHHHHHHcCCeEEee
Q 014742 56 IPNNQMLGGRKVSDGKVGPYV--WLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW-IIAMEACNSQAITYVPL 132 (419)
Q Consensus 56 ~pd~~ai~~~~~~~~~~~~~~--~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~-~~~~lA~~~~G~~~vpl 132 (419)
.|+.+|.+..- .|.++..+ .+|...+........ ...++.++|++....+-+-+. +..+++.+..|+..+..
T Consensus 596 ~~~~~a~i~~T--SGSTG~PKgV~~~h~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~ 670 (1296)
T PRK10252 596 QPHHTAYIIFT--SGSTGRPKGVMVGQTAIVNRLLWMQ---NHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMA 670 (1296)
T ss_pred CCCCeEEEEEC--CCCCCCCCEEEeccHHHHHHHHHHH---HhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEEC
Confidence 35566655331 44444433 567777765544333 345889999999888865544 33467778889888876
Q ss_pred cc--CCChhHHHHHHhhcCceEEEEeCCChhhHhhcCcc-----CCCCccEEEEecCC
Q 014742 133 YD--TLGANAVEFIINHAEVSIAFVQENKIPSILSCLPR-----CCLYLKTIVSFANV 183 (419)
Q Consensus 133 ~~--~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 183 (419)
++ ...++.+...+++.++.++......+..+.+.... .+..++.+++.++.
T Consensus 671 ~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~ 728 (1296)
T PRK10252 671 EPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGEA 728 (1296)
T ss_pred ChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecCC
Confidence 54 45678899999999999998887666555443211 12456666665544
No 277
>COG5012 Predicted cobalamin binding protein [General function prediction only]
Probab=31.10 E-value=3.8e+02 Score=23.81 Aligned_cols=52 Identities=19% Similarity=0.189 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHh-cCceEEEeC-C-CHHHHHHHhhhhcCeEEEecchHHHHHHH
Q 014742 277 HIYDQIIETHCIH-KGCSIGFWR-G-DVRYLMEDIQELKPTMFSGVPRVYDRIYT 328 (419)
Q Consensus 277 h~~g~~~~l~~l~-~G~~ivl~~-~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~ 328 (419)
|..|-..+-..|- .|-.++=.. . .++.+.+..+++|++++..+-.+=..+..
T Consensus 117 HdIGk~iV~~ml~~aGfevidLG~dvP~e~fve~a~e~k~d~v~~SalMTttm~~ 171 (227)
T COG5012 117 HDIGKNIVATMLEAAGFEVIDLGRDVPVEEFVEKAKELKPDLVSMSALMTTTMIG 171 (227)
T ss_pred HHHHHHHHHHHHHhCCcEEEecCCCCCHHHHHHHHHHcCCcEEechHHHHHHHHH
Confidence 5566655433332 355554433 3 88999999999999998877666555543
No 278
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=30.93 E-value=7.7e+02 Score=27.80 Aligned_cols=122 Identities=10% Similarity=-0.007 Sum_probs=75.8
Q ss_pred CCCCCceeeeeccCCCCCcee--EeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCch--hHHHHHHHHHHcCCeEEe
Q 014742 56 IPNNQMLGGRKVSDGKVGPYV--WLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCP--EWIIAMEACNSQAITYVP 131 (419)
Q Consensus 56 ~pd~~ai~~~~~~~~~~~~~~--~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~--~~~~~~lA~~~~G~~~vp 131 (419)
.|+.++.+... .|.++..+ .+|..++...+...... .++.++|++...+|-.- .+...++..+..|...+.
T Consensus 791 ~~~d~a~i~~T--SGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~ 865 (1140)
T PRK06814 791 DPDDPAVILFT--SGSEGTPKGVVLSHRNLLANRAQVAAR---IDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFL 865 (1140)
T ss_pred CCCCcEEEEEC--CCccCCCcEEEecHHHHHHHHHHHHHh---hCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEE
Confidence 45666665431 34444433 46888887666655543 46788999988887432 333456677778888876
Q ss_pred eccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCc-cCCCCccEEEEecC
Q 014742 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLP-RCCLYLKTIVSFAN 182 (419)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 182 (419)
.+.....+.+...+++.++..+.........+.+... .....++.++...+
T Consensus 866 ~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~lr~v~~gg~ 917 (1140)
T PRK06814 866 YPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYAHPYDFRSLRYVFAGAE 917 (1140)
T ss_pred ecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhcccccccceeEEEEcCC
Confidence 6655556677788899999999887665554433221 12234555555443
No 279
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=30.90 E-value=3.5e+02 Score=23.36 Aligned_cols=58 Identities=10% Similarity=0.036 Sum_probs=37.8
Q ss_pred EEEEecCh-HHHHHHHHHHHH-HhcCceEEEeCC--CHHHHHHHhhhhcCeEEEecchHHHH
Q 014742 268 TYFSFLPL-AHIYDQIIETHC-IHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDR 325 (419)
Q Consensus 268 ~~l~~~pl-~h~~g~~~~l~~-l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l~~~P~~~~~ 325 (419)
+++...+- .|..|..++-.. -..|..++.... .++.+.+.+.+.+++++..+-.+-..
T Consensus 85 vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~~ 146 (201)
T cd02070 85 VVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTTT 146 (201)
T ss_pred EEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccccc
Confidence 33444332 577777653333 456888775543 88999999999999988765544333
No 280
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=30.87 E-value=6.2e+02 Score=26.19 Aligned_cols=103 Identities=13% Similarity=0.010 Sum_probs=70.4
Q ss_pred CCceEEEEeC--CCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEE
Q 014742 219 KTNISTIMYT--SGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGF 296 (419)
Q Consensus 219 ~~~~~~i~~T--SGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl 296 (419)
++.++++... .+..|. ...+|++.+...+..+...+.. .+.++|++...++-..- .+..+++++..|+.++-
T Consensus 35 ~~~~a~~~~~~~~~~~~~--~~~~Ty~el~~~v~~lA~~L~~---~~~~gd~V~i~~~n~~e-~~~~~lA~~~~G~v~vp 108 (631)
T PRK07769 35 GDKLAYRFLDFSTERDGV--ARDLTWSQFGARNRAVGARLQQ---VTKPGDRVAILAPQNLD-YLIAFFGALYAGRIAVP 108 (631)
T ss_pred CCCeEEEEeccCCCCCCc--eeEeeHHHHHHHHHHHHHHHHH---hcCCCCEEEEEcCCChH-HHHHHHHHHHcCCEEEe
Confidence 4566665432 112222 3468999999999998887743 25788999888766532 23347788999988775
Q ss_pred e-CC-C---HHHHHHHhhhhcCeEEEecchHHHHHH
Q 014742 297 W-RG-D---VRYLMEDIQELKPTMFSGVPRVYDRIY 327 (419)
Q Consensus 297 ~-~~-~---~~~~~~~i~~~~~t~l~~~P~~~~~l~ 327 (419)
. +. . .+.+...++..++..+++.+.....+.
T Consensus 109 l~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 144 (631)
T PRK07769 109 LFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVR 144 (631)
T ss_pred eCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHH
Confidence 5 22 2 467888899999999998887665543
No 281
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=30.81 E-value=39 Score=34.87 Aligned_cols=30 Identities=27% Similarity=0.294 Sum_probs=25.1
Q ss_pred CCCceEEEEeCCCCCC-CCCeEEeechhHHH
Q 014742 218 KKTNISTIMYTSGTTG-EPKGVVLTNQAIVA 247 (419)
Q Consensus 218 ~~~~~~~i~~TSGtTG-~PK~V~~sh~~l~~ 247 (419)
.++.+.+...|||||| .+|.+.+|+..+..
T Consensus 99 ~~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~ 129 (612)
T PLN02620 99 CSKPISEFLTSSGTSGGERKLMPTIEEELGR 129 (612)
T ss_pred CCCChhhhhhcCCCCCCceeeeecCHHHHHH
Confidence 4567778889999997 59999999997765
No 282
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=30.71 E-value=94 Score=31.03 Aligned_cols=82 Identities=20% Similarity=0.120 Sum_probs=52.6
Q ss_pred cCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeC----C-CHHHHHHHhhhhcCeEEEecchHHHHHHHHHHHHhhc
Q 014742 262 VCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR----G-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISS 336 (419)
Q Consensus 262 ~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~----~-~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~ 336 (419)
-..++|.++.--|-|+..-..+ -..|..++-.+ + +++.+.+.+++++|..++++|++-+=.-..+
T Consensus 175 l~~pGd~v~vE~PtY~~~~~~~----~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tm------ 244 (459)
T COG1167 175 LLDPGDTVLVEDPTYPGALQAL----EALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTM------ 244 (459)
T ss_pred hCCCCCEEEEcCCCcHHHHHHH----HHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCcc------
Confidence 3557899999988886643222 23466665443 2 9999999999999999999998743110000
Q ss_pred cCchHHHHHHHHHHhhh
Q 014742 337 GGALSKKLFEFAYNYKL 353 (419)
Q Consensus 337 ~~~~~~~~~~~~~~~~~ 353 (419)
...-++.+.++|.++..
T Consensus 245 s~~rR~~Ll~lA~~~~~ 261 (459)
T COG1167 245 SLERRKALLALAEKYDV 261 (459)
T ss_pred CHHHHHHHHHHHHHcCC
Confidence 00123567777766643
No 283
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=30.48 E-value=2.7e+02 Score=27.56 Aligned_cols=52 Identities=10% Similarity=0.077 Sum_probs=24.8
Q ss_pred EEEcCCchhHHHH-HHHHHHcCCeEEeeccCCC--hhHHHHHHhhcCceEEEEeC
Q 014742 106 GIYGSNCPEWIIA-MEACNSQAITYVPLYDTLG--ANAVEFIINHAEVSIAFVQE 157 (419)
Q Consensus 106 ~l~~~n~~~~~~~-~lA~~~~G~~~vpl~~~~~--~~~l~~~l~~~~~~~vi~~~ 157 (419)
++...++...+.+ +++++..|--++.-.+.+. ..-+...+...++++.+++.
T Consensus 79 av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~ 133 (432)
T PRK06702 79 AVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP 133 (432)
T ss_pred EEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC
Confidence 3445555555443 3345555554443333332 12233335666666666664
No 284
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=30.24 E-value=2.7e+02 Score=28.22 Aligned_cols=86 Identities=12% Similarity=0.025 Sum_probs=64.6
Q ss_pred EeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEE
Q 014742 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (419)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l 316 (419)
.+|...+...+..+...+.. ..++..++++....+-.-. .+..+++++..|+..+..+. ..+.+.+.+++.++..+
T Consensus 48 ~lTy~~l~~~~~~la~~L~~-~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 125 (560)
T PRK08974 48 VMTFRKLEERSRAFAAYLQN-GLGLKKGDRVALMMPNLLQ-YPIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAI 125 (560)
T ss_pred cccHHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEE
Confidence 68999999988888887632 1267788888877655422 23347888999999998765 78888999999999999
Q ss_pred EecchHHHHH
Q 014742 317 SGVPRVYDRI 326 (419)
Q Consensus 317 ~~~P~~~~~l 326 (419)
.+.+.....+
T Consensus 126 i~~~~~~~~~ 135 (560)
T PRK08974 126 VIVSNFAHTL 135 (560)
T ss_pred EEeccccHHH
Confidence 8877654433
No 285
>PLN02356 phosphateglycerate kinase
Probab=30.20 E-value=4.1e+02 Score=26.29 Aligned_cols=69 Identities=13% Similarity=0.037 Sum_probs=47.2
Q ss_pred HHHHHHHHhCCC-CCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeC
Q 014742 88 IRFGSAMRSRGV-NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 157 (419)
Q Consensus 88 ~~la~~L~~~g~-~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~ 157 (419)
..+...+.+.|. ++|..|. ....+---+.+.++|...|.-++.+-|.....+....++..++.++.++.
T Consensus 89 ~~~i~~a~~~g~~~~~g~Vv-eaSSGN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~~ir~~GAeVi~v~~ 158 (423)
T PLN02356 89 VKIIEEALESGQLFPGGVVT-EGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVRP 158 (423)
T ss_pred HHHHHHHHhCCccCCCCEEE-EeCCHHHHHHHHHHHHHcCCcEEEEECCCCcHHHHHHHHHcCCEEEEECC
Confidence 333334444443 4676655 33444446777788889999777776666667778899999999999953
No 286
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=30.05 E-value=39 Score=30.59 Aligned_cols=73 Identities=12% Similarity=0.133 Sum_probs=56.5
Q ss_pred HHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCC--hhHHHHHHhh-cCceEEEEeCCCh
Q 014742 88 IRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLG--ANAVEFIINH-AEVSIAFVQENKI 160 (419)
Q Consensus 88 ~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~--~~~l~~~l~~-~~~~~vi~~~~~~ 160 (419)
..+...+.++-.-||+-=.+.+|++..+.....++.-++.+-+|++|+++ .+.+..+++. +.++++|..+...
T Consensus 96 DE~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~iK~~F~tSPgN 171 (375)
T KOG0633|consen 96 DELIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKIKCIFLTSPGN 171 (375)
T ss_pred HHHHHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccccceEEEEcCCCC
Confidence 34455566666789977777888898888888999999999999999886 4567777765 4888888876544
No 287
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=29.24 E-value=4.1e+02 Score=23.58 Aligned_cols=67 Identities=7% Similarity=-0.069 Sum_probs=46.0
Q ss_pred HHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCC
Q 014742 91 GSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (419)
Q Consensus 91 a~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (419)
...+.+.|..+++.|... ..+-.-..+.++|...|..++.+-|..........++..+++++.++..
T Consensus 39 l~~a~~~g~~~~~~vv~~-ssGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 105 (244)
T cd00640 39 ILLAEEEGKLPKGVIIES-TGGNTGIALAAAAARLGLKCTIVMPEGASPEKVAQMRALGAEVVLVPGD 105 (244)
T ss_pred HHHHHHcCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 334444443345555443 3345556667788889998877777667778888899999999999876
No 288
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=28.97 E-value=2.5e+02 Score=25.86 Aligned_cols=91 Identities=9% Similarity=0.028 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhH---HHHHHhhcCceEEEEe
Q 014742 80 YQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANA---VEFIINHAEVSIAFVQ 156 (419)
Q Consensus 80 y~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~---l~~~l~~~~~~~vi~~ 156 (419)
+.++.+..+.+-.++++.--....+..+...+...|+.-.+++-..+..-+--....++++ +...++..+.++||++
T Consensus 156 ~~~~~~~L~~l~~~~~~~~~~~~~~~~v~~H~af~Yl~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e 235 (286)
T cd01019 156 LEAFNARLAELDATIKERLAPVKTKPFFVFHDAYGYFEKRYGLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFAE 235 (286)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCeEEEecccHHHHHHHcCCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCcEEEec
Confidence 4556666666655555431122355666677777777766655443322111123344554 5566678899999999
Q ss_pred CCChhhHhhcCccC
Q 014742 157 ENKIPSILSCLPRC 170 (419)
Q Consensus 157 ~~~~~~~~~~~~~~ 170 (419)
........+.+.+.
T Consensus 236 ~~~~~~~~~~ia~~ 249 (286)
T cd01019 236 PQFHPKIAETLAEG 249 (286)
T ss_pred CCCChHHHHHHHHh
Confidence 98777666666544
No 289
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=28.97 E-value=3.1e+02 Score=28.32 Aligned_cols=95 Identities=12% Similarity=0.036 Sum_probs=68.0
Q ss_pred CCceEEEEeCCCCCCCCCeEEeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeC
Q 014742 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (419)
Q Consensus 219 ~~~~~~i~~TSGtTG~PK~V~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~ 298 (419)
++.++++... ..| ....+|+..+...+..+...+.. .++.++|++...++-..- .+...++++..|+.++..+
T Consensus 53 p~~~a~~~~~--~~~--~~~~~Ty~el~~~v~~~A~~L~~--~Gv~~gd~Vai~~~n~~e-~~~~~lA~~~~Gav~vpl~ 125 (614)
T PRK08180 53 PDRVFLAERG--ADG--GWRRLTYAEALERVRAIAQALLD--RGLSAERPLMILSGNSIE-HALLALAAMYAGVPYAPVS 125 (614)
T ss_pred CCCceeeecc--CCC--ceeEeeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEecCCCHH-HHHHHHHHHHcCCeEeeec
Confidence 4556655421 112 13578999999999988887643 367888999888766533 2334778899999998875
Q ss_pred C--C-----HHHHHHHhhhhcCeEEEecc
Q 014742 299 G--D-----VRYLMEDIQELKPTMFSGVP 320 (419)
Q Consensus 299 ~--~-----~~~~~~~i~~~~~t~l~~~P 320 (419)
. . .+.+...++..++..+++..
T Consensus 126 ~~~~~~~~~~~~l~~~l~~~~~~~li~~~ 154 (614)
T PRK08180 126 PAYSLVSQDFGKLRHVLELLTPGLVFADD 154 (614)
T ss_pred cccccccCCHHHHHHHHhcCCCcEEEEcC
Confidence 4 3 67888899999999988764
No 290
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=28.18 E-value=1.9e+02 Score=22.32 Aligned_cols=39 Identities=5% Similarity=-0.043 Sum_probs=33.1
Q ss_pred HHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCC
Q 014742 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (419)
Q Consensus 120 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (419)
..+...|.-++-+..+.+.+++...+.+.+|++|..+..
T Consensus 21 ~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~~ 59 (119)
T cd02067 21 RALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSGL 59 (119)
T ss_pred HHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecc
Confidence 344457888889999999999999999999999998753
No 291
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=28.10 E-value=5.2e+02 Score=24.41 Aligned_cols=55 Identities=11% Similarity=0.115 Sum_probs=26.8
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccC----CChhHHHHHHhhcCceEEEEe
Q 014742 99 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT----LGANAVEFIINHAEVSIAFVQ 156 (419)
Q Consensus 99 ~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~----~~~~~l~~~l~~~~~~~vi~~ 156 (419)
+++||.|++-.|. |.....++...|+.+++++.+ ...+.+...+...++++|++.
T Consensus 97 ~~~gd~Vlv~~p~---y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~~~~~~~k~v~l~ 155 (351)
T PRK14807 97 INKGDVVIYPHPS---FAMYSVYSKIAGAVEIPVKLKEDYTYDVGSFIKVIEKYQPKLVFLC 155 (351)
T ss_pred cCCCCEEEEeCCC---hHHHHHHHHHcCCeEEEeecCCCCCCCHHHHHHHhhccCCCEEEEe
Confidence 3567776664332 223333445566655544322 334555555544455555544
No 292
>PRK07868 acyl-CoA synthetase; Validated
Probab=27.69 E-value=4.3e+02 Score=29.43 Aligned_cols=69 Identities=7% Similarity=0.052 Sum_probs=48.5
Q ss_pred hCCCCCCCeEEEEcCCchhH--HHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhh
Q 014742 96 SRGVNPGDRCGIYGSNCPEW--IIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILS 165 (419)
Q Consensus 96 ~~g~~~gd~V~l~~~n~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 165 (419)
..++.++|++...+|=.-.+ ...++++ ..|+..+.+.+.++++.+...+++.++.+++.....+..+.+
T Consensus 640 ~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~-l~gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~ 710 (994)
T PRK07868 640 AAALDRRDTVYCLTPLHHESGLLVSLGGA-VVGGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVD 710 (994)
T ss_pred hcCCCCCCeEEEecChHHHhHHHHHHHHH-hccceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHh
Confidence 34788899998888744332 2233444 445544555667899999999999999999988776665554
No 293
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=27.27 E-value=3.1e+02 Score=28.55 Aligned_cols=106 Identities=11% Similarity=0.055 Sum_probs=72.4
Q ss_pred HhCCCCCceeeeeccCCCCCce--eEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHH-HHHHHcCCeEE
Q 014742 54 KRIPNNQMLGGRKVSDGKVGPY--VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM-EACNSQAITYV 130 (419)
Q Consensus 54 ~~~pd~~ai~~~~~~~~~~~~~--~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~-lA~~~~G~~~v 130 (419)
...||..|.+..- .|.+|.. ..+||+.+...+..+...+. -++++|++.-++|=.--+--++ .++...|.+.+
T Consensus 187 ~~~~dDlatiiYT--SGTTG~PKGVmLth~N~~~~v~~~~~~~~--~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~ 262 (613)
T COG1022 187 PPKPDDLATIIYT--SGTTGTPKGVMLTHRNLLAQVAGIDEVLP--PIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTV 262 (613)
T ss_pred CCCccceEEEEEc--CCCCCCCceEEEehHHHHHHHHHHHhhCC--CCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEE
Confidence 3567777776441 3333332 36899999999988877774 3789999999999553333332 45555555444
Q ss_pred eeccCCChhHHHHHHhhcCceEEEEeCCChhhHhh
Q 014742 131 PLYDTLGANAVEFIINHAEVSIAFVQENKIPSILS 165 (419)
Q Consensus 131 pl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 165 (419)
.- ..+.+.+..-+...+|.+++.-....+.+.+
T Consensus 263 ~~--~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~ 295 (613)
T COG1022 263 LF--KEDPRTLLEDLKEVRPTVMIGVPRVWEKVYK 295 (613)
T ss_pred Ee--cCCHHHHHHHHHHhCCeEEeechHHHHHHHH
Confidence 33 3468889999999999999998766555444
No 294
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=27.23 E-value=3.4e+02 Score=21.96 Aligned_cols=46 Identities=13% Similarity=0.032 Sum_probs=32.4
Q ss_pred HHHHHHHHHHH-HhcCceEEEeCC--CHHHHHHHhhhhcCeEEEecchH
Q 014742 277 HIYDQIIETHC-IHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRV 322 (419)
Q Consensus 277 h~~g~~~~l~~-l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l~~~P~~ 322 (419)
|..|...+... =..|..++...- .++.+++...+++++++..+--+
T Consensus 14 HdiGk~iv~~~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~ 62 (134)
T TIGR01501 14 HAVGNKILDHAFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLY 62 (134)
T ss_pred hhHhHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc
Confidence 66666553333 345777766644 89999999999999987765444
No 295
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=27.05 E-value=1.3e+02 Score=28.39 Aligned_cols=52 Identities=10% Similarity=0.052 Sum_probs=41.6
Q ss_pred EeeHHHHHHH------HHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCe
Q 014742 77 WLTYQEVYDA------AIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAIT 128 (419)
Q Consensus 77 ~~Ty~el~~~------~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 128 (419)
.+.|.++... ...+...+.+.|+.+++.|.++|.++......++++..+|..
T Consensus 238 nip~~~~~~~~~~~~~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~ 295 (320)
T PLN02723 238 CVPFPQMLDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKT 295 (320)
T ss_pred ccCHHHhcCCCCCCCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 4667666432 456677778889999999999999999988889999999974
No 296
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=26.68 E-value=1.3e+02 Score=27.71 Aligned_cols=52 Identities=10% Similarity=0.029 Sum_probs=41.9
Q ss_pred EeeHHHHHH-----HHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCe
Q 014742 77 WLTYQEVYD-----AAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAIT 128 (419)
Q Consensus 77 ~~Ty~el~~-----~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 128 (419)
.+.|.++.. ....+...|.+.|+.+++.|.++|.++...-.+++++..+|..
T Consensus 201 ~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 201 NVPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred CCCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 466777653 2455666677889999999999999999999999999889975
No 297
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=26.68 E-value=1.3e+02 Score=21.84 Aligned_cols=39 Identities=15% Similarity=0.118 Sum_probs=33.1
Q ss_pred HHHHh-CCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEE
Q 014742 92 SAMRS-RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYV 130 (419)
Q Consensus 92 ~~L~~-~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v 130 (419)
.+|.+ .|+++|+.++.+.....|.+..+=++++++-+-+
T Consensus 4 sYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~ 43 (87)
T cd07050 4 SYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVEL 43 (87)
T ss_pred hhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceee
Confidence 45664 5999999999999999999999989998886655
No 298
>PRK07476 eutB threonine dehydratase; Provisional
Probab=26.54 E-value=4.1e+02 Score=24.94 Aligned_cols=49 Identities=12% Similarity=-0.067 Sum_probs=37.4
Q ss_pred CCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCC
Q 014742 110 SNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (419)
Q Consensus 110 ~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (419)
..+=.-..+.++|...|..++.+-|...+......++..++.+++++..
T Consensus 74 SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~ 122 (322)
T PRK07476 74 STGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRS 122 (322)
T ss_pred CCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 4444455667788899987776666666677788899999999999864
No 299
>TIGR01279 DPOR_bchN light-independent protochlorophyllide reductase, N subunit. This enzyme describes the N subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme involved in bacteriochlorophyll biosynthesis. This subunit shows homology to the nitrogenase molybdenum-iron protein NifN.
Probab=26.26 E-value=5.3e+02 Score=25.22 Aligned_cols=67 Identities=13% Similarity=0.021 Sum_probs=41.5
Q ss_pred CCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChh-HHHHHHhhcCceEEEEeCCChhhHhhcC
Q 014742 100 NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGAN-AVEFIINHAEVSIAFVQENKIPSILSCL 167 (419)
Q Consensus 100 ~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~-~l~~~l~~~~~~~vi~~~~~~~~~~~~~ 167 (419)
-.|.+|+++......+-++-+-. .+|..++.+......+ .....++.......+.+........+.+
T Consensus 272 l~Gkrv~i~gd~~~~~~l~~~L~-elGm~~v~~~t~~~~~~~~~~~~~~l~~~~~v~~~~d~~~l~~~i 339 (407)
T TIGR01279 272 LRGKKIFFFGDNLLELPLARFLK-RCGMEVVECGTPYIHRRFHAAELALLEGGVRIVEQPDFHRQLQRI 339 (407)
T ss_pred cCCCEEEEECCchHHHHHHHHHH-HCCCEEEEecCCCCChHHHHHHHhhcCCCCeEEeCCCHHHHHHHH
Confidence 36999999988765554444434 4899888776655533 3355666665555566665555444433
No 300
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=26.10 E-value=3e+02 Score=25.30 Aligned_cols=55 Identities=13% Similarity=0.094 Sum_probs=36.4
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeecc----------CCChhHHHHHHhh-cCceEEEEe
Q 014742 99 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD----------TLGANAVEFIINH-AEVSIAFVQ 156 (419)
Q Consensus 99 ~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~----------~~~~~~l~~~l~~-~~~~~vi~~ 156 (419)
+++||.|.+.-+. +...+-++...|+.++.+.+ ..+.+.+...++. .++++|+..
T Consensus 96 ~~~gd~Vlv~~~~---h~s~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~ 161 (294)
T cd00615 96 CGPGDKILIDRNC---HKSVINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVIT 161 (294)
T ss_pred CCCCCEEEEeCCc---hHHHHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEE
Confidence 4789998877553 33344566778987776654 3467778888764 456766655
No 301
>CHL00073 chlN photochlorophyllide reductase subunit N
Probab=25.69 E-value=6.7e+02 Score=25.09 Aligned_cols=67 Identities=10% Similarity=-0.015 Sum_probs=38.8
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhH----HHHHHh----hcCc-eEEEEeCCChhhHhhcCc
Q 014742 101 PGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANA----VEFIIN----HAEV-SIAFVQENKIPSILSCLP 168 (419)
Q Consensus 101 ~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~----l~~~l~----~~~~-~~vi~~~~~~~~~~~~~~ 168 (419)
.|++|++...+...+-++-+-. .+|..++.+......++ ....+. ..+. ..++++........+.+.
T Consensus 313 ~GKrvai~Gdp~~~i~LarfL~-elGmevV~vgt~~~~~~~~~~d~~~l~~~~~~~~~~~~vive~~D~~el~~~i~ 388 (457)
T CHL00073 313 RGKSVFFMGDNLLEISLARFLI-RCGMIVYEIGIPYMDKRYQAAELALLEDTCRKMNVPMPRIVEKPDNYNQIQRIR 388 (457)
T ss_pred CCCEEEEECCCcHHHHHHHHHH-HCCCEEEEEEeCCCChhhhHHHHHHHHHHhhhcCCCCcEEEeCCCHHHHHHHHh
Confidence 6999997666565555554444 59999998866554333 222332 3333 345566655555545443
No 302
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=25.50 E-value=2e+02 Score=24.54 Aligned_cols=50 Identities=8% Similarity=-0.066 Sum_probs=34.5
Q ss_pred eEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCC
Q 014742 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAI 127 (419)
Q Consensus 76 ~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~ 127 (419)
..+||.|+...+.++|..+.+. +...+.+.+...++-..++..++- .+|.
T Consensus 15 ~~~s~~~i~~~i~~la~~i~~~-~~~~~~viV~i~~gg~~~A~~La~-~l~~ 64 (181)
T PRK09162 15 CLVSAAEVEAAIDRMADEITAD-LADENPLVLCVMGGGLVFTGQLLP-RLDF 64 (181)
T ss_pred EeecHHHHHHHHHHHHHHHHHH-cCCCCeEEEEECCCcHHHHHHHHH-HcCC
Confidence 5799999999999999999874 222233556666666666666653 3453
No 303
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=25.28 E-value=4.5e+02 Score=22.71 Aligned_cols=81 Identities=7% Similarity=-0.054 Sum_probs=55.8
Q ss_pred EeeHHHHHHHHHHHHHHHHhC-------CCCCCCeEEEEcCCchhH----HHHHHHHHHcCCeEEeeccCCChhHHHHHH
Q 014742 77 WLTYQEVYDAAIRFGSAMRSR-------GVNPGDRCGIYGSNCPEW----IIAMEACNSQAITYVPLYDTLGANAVEFII 145 (419)
Q Consensus 77 ~~Ty~el~~~~~~la~~L~~~-------g~~~gd~V~l~~~n~~~~----~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l 145 (419)
.++..|..-.++.+-..|... +...+.+|.+.+..+-.+ ......+-..|.-++-+..+.|.+++...+
T Consensus 50 ~i~va~e~~as~~~~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~ 129 (201)
T cd02070 50 EIFVPELLMAADAMKAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAV 129 (201)
T ss_pred CeeHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHH
Confidence 588888877776655544321 221234555555543222 333445567899999999999999999999
Q ss_pred hhcCceEEEEeC
Q 014742 146 NHAEVSIAFVQE 157 (419)
Q Consensus 146 ~~~~~~~vi~~~ 157 (419)
.+.+|++|..+.
T Consensus 130 ~~~~~d~v~lS~ 141 (201)
T cd02070 130 KEHKPDILGLSA 141 (201)
T ss_pred HHcCCCEEEEec
Confidence 999999999875
No 304
>PRK05939 hypothetical protein; Provisional
Probab=24.54 E-value=3.6e+02 Score=26.33 Aligned_cols=19 Identities=11% Similarity=0.366 Sum_probs=8.8
Q ss_pred HhhcCceEEEEeCCChhhH
Q 014742 145 INHAEVSIAFVQENKIPSI 163 (419)
Q Consensus 145 l~~~~~~~vi~~~~~~~~~ 163 (419)
+...+.++.+++....+.+
T Consensus 106 l~~~G~~v~~v~~~d~e~l 124 (397)
T PRK05939 106 LRGLGVEVTMVDATDVQNV 124 (397)
T ss_pred HHhcCCEEEEECCCCHHHH
Confidence 3444555555544433333
No 305
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=24.35 E-value=4.3e+02 Score=25.57 Aligned_cols=16 Identities=19% Similarity=0.397 Sum_probs=7.6
Q ss_pred CeEEee-chhHHHHhhh
Q 014742 236 KGVVLT-NQAIVAEVLS 251 (419)
Q Consensus 236 K~V~~s-h~~l~~~~~~ 251 (419)
.|++.. ...+...+..
T Consensus 207 ~G~i~~~~~~~~~~l~~ 223 (382)
T TIGR02080 207 AGAVIAKDPQVAEELAW 223 (382)
T ss_pred eEEEEeCCHHHHHHHHH
Confidence 565544 4445444433
No 306
>PRK02842 light-independent protochlorophyllide reductase subunit N; Provisional
Probab=24.24 E-value=6.2e+02 Score=24.92 Aligned_cols=66 Identities=11% Similarity=0.014 Sum_probs=41.9
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHH-cCCeEEeeccCCChhHH-HHHHhhcCceEEEEeCCChhhHhhcC
Q 014742 101 PGDRCGIYGSNCPEWIIAMEACNS-QAITYVPLYDTLGANAV-EFIINHAEVSIAFVQENKIPSILSCL 167 (419)
Q Consensus 101 ~gd~V~l~~~n~~~~~~~~lA~~~-~G~~~vpl~~~~~~~~l-~~~l~~~~~~~vi~~~~~~~~~~~~~ 167 (419)
.|.+|++....+..+-++-+ +.. +|..++.+......++. ...++.......+.+........+.+
T Consensus 289 ~Gkrvai~g~~~~~~~la~~-L~eelGm~~v~v~t~~~~~~~~~~~~~~l~~~~~v~~~~D~~~l~~~i 356 (427)
T PRK02842 289 RGKRVFFLPDSQLEIPLARF-LSRECGMELVEVGTPYLNRRFLAAELALLPDGVRIVEGQDVERQLDRI 356 (427)
T ss_pred CCcEEEEECCchhHHHHHHH-HHHhCCCEEEEeCCCCCCHHHHHHHHHhccCCCEEEECCCHHHHHHHH
Confidence 58899999876555544444 444 99999988776654433 55556555566666666555444443
No 307
>cd01979 Pchlide_reductase_N Pchlide_reductase_N: N protein of the NB protein complex of Protochlorophyllide (Pchlide)_reductase. Pchlide reductase catalyzes the reductive formation of chlorophyllide (chlide) from protochlorophyllide (pchlide) during biosynthesis of chlorophylls and bacteriochlorophylls. This group contains both the light-independent Pchlide reductase (DPOR) and light-dependent Pchlide reductase (LPOR). Angiosperms contain only LPOR, cyanobacteria, algae and gymnosperms contain both DPOR and LPOR, primitive anoxygenic photosynthetic bacteria contain only DPOR. NB is structurally similar to the FeMo protein of nitrogenase, forming an N2B2 heterotetramer. N and B are homologous to the FeMo alpha and beta subunits respectively. Also in common with nitrogenase in vitro DPOR activity requires ATP hydrolysis and dithoionite or ferredoxin as electron donor. The NB protein complex may serve as a catalytic site for Pchlide reduction similar to MoFe for nitrogen reduction.
Probab=24.08 E-value=5.9e+02 Score=24.77 Aligned_cols=66 Identities=12% Similarity=-0.004 Sum_probs=41.5
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCC-ChhHHHHHHhhcCceEEEEeCCChhhHhhcC
Q 014742 101 PGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTL-GANAVEFIINHAEVSIAFVQENKIPSILSCL 167 (419)
Q Consensus 101 ~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~-~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~ 167 (419)
.|.+|++.......+-++-+.. .+|..++.+.... ..+.....++.......+.+........+.+
T Consensus 275 ~Gkrv~i~g~~~~~~~la~~L~-elGm~vv~~~t~~~~~~~~~~~~~~l~~~~~v~~~~d~~~l~~~i 341 (396)
T cd01979 275 RGKSIFFMGDNLLEIPLARFLT-RCGMIVVEVGTPYLDKRFQAAELELLPPMVRIVEKPDNYRQLDRI 341 (396)
T ss_pred cCCEEEEECCchHHHHHHHHHH-HCCCEEEeeCCCcCChHHHHHHHHhcCCCCeEEECCCHHHHHHHH
Confidence 5889999988765554444444 4999998886654 3333445555555566677766665544443
No 308
>PRK06381 threonine synthase; Validated
Probab=23.79 E-value=3.1e+02 Score=25.63 Aligned_cols=65 Identities=9% Similarity=-0.089 Sum_probs=44.2
Q ss_pred HHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCC
Q 014742 91 GSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK 159 (419)
Q Consensus 91 a~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~ 159 (419)
...+.+.|. +.| +....+-.-+.+.++|...|..+..+-|..........++..++++++++...
T Consensus 55 l~~a~~~g~---~~l-v~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~~~ 119 (319)
T PRK06381 55 VRRAMRLGY---SGI-TVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKEMEKYGAEIIYVDGKY 119 (319)
T ss_pred HHHHHHcCC---CEE-EEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEcCCCH
Confidence 333445552 344 34455555566677888999877766555555666778999999999998753
No 309
>PRK06145 acyl-CoA synthetase; Validated
Probab=23.70 E-value=4.8e+02 Score=25.82 Aligned_cols=82 Identities=5% Similarity=-0.093 Sum_probs=61.1
Q ss_pred EeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHHHHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeEE
Q 014742 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (419)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~l 316 (419)
.+|...+...+..+...+.. .++.+++++...++-.-. .+..+++++..|+..+..+. ..+.+...+++.++..+
T Consensus 27 ~~ty~el~~~v~~~a~~L~~--~g~~~~~~v~i~~~~~~~-~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~ 103 (497)
T PRK06145 27 EISYAEFHQRILQAAGMLHA--RGIGQGDVVALLMKNSAA-FLELAFAASYLGAVFLPINYRLAADEVAYILGDAGAKLL 103 (497)
T ss_pred ceeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEecccccCHHHHHHHHHhcCCcEE
Confidence 58999999888888876643 256778888877655422 33347788999988887765 77888889999999988
Q ss_pred EecchHH
Q 014742 317 SGVPRVY 323 (419)
Q Consensus 317 ~~~P~~~ 323 (419)
...+...
T Consensus 104 i~~~~~~ 110 (497)
T PRK06145 104 LVDEEFD 110 (497)
T ss_pred EEccchh
Confidence 8766554
No 310
>TIGR00623 sula cell division inhibitor SulA. All proteins in this family for which the functions are known are cell division inhibitors. In E. coli, SulA is one of the SOS regulated genes.
Probab=23.64 E-value=2.8e+02 Score=23.38 Aligned_cols=52 Identities=12% Similarity=-0.073 Sum_probs=36.2
Q ss_pred HHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeec--c-CCChhHHH
Q 014742 91 GSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLY--D-TLGANAVE 142 (419)
Q Consensus 91 a~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~--~-~~~~~~l~ 142 (419)
+.+|.+.|+.....+.|...+..+-+.++-=|++.|..-+.|- + ..+.++++
T Consensus 74 ~~~L~~~Gl~l~rvlli~~~~~~d~lwa~EQaLrSG~c~aVL~WLp~~l~~~~lR 128 (168)
T TIGR00623 74 KEWVQSSGLPLTKVMQISQLSPCNTVESMIRALRTGNYSVVIGWLTDELTEEEHA 128 (168)
T ss_pred HHHHHHcCCChhHEEEEecCCchhHHHHHHHHHHhCCCcEEEecCCccCCHHHHH
Confidence 6788899998777777776777788888888888886444332 3 56655433
No 311
>PRK07787 acyl-CoA synthetase; Validated
Probab=23.50 E-value=4.3e+02 Score=25.99 Aligned_cols=73 Identities=8% Similarity=0.038 Sum_probs=56.6
Q ss_pred EeechhHHHHhhhhhhhhhhcCccCCCCcEEEEecChHHHHHHH-HHHHHHhcCceEEEeCC--CHHHHHHHhhhhcCeE
Q 014742 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQI-IETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (419)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~-~~l~~l~~G~~ivl~~~--~~~~~~~~i~~~~~t~ 315 (419)
.+|...+...+..+...+ . +.|++....+-. ..+. .+++++..|+..+..+. ..+.+...+++.+++.
T Consensus 25 ~~Ty~el~~~~~~~a~~L-----~--~~~~V~l~~~~~--~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 95 (471)
T PRK07787 25 VLSRSDLAGAATAVAERV-----A--GARRVAVLATPT--LATVLAVVGALIAGVPVVPVPPDSGVAERRHILADSGAQA 95 (471)
T ss_pred EEEHHHHHHHHHHHHHHh-----c--cCCEEEEECCCC--HHHHHHHHHHHhcCcEEeecCCCCChHHHHHHHHhcCCCE
Confidence 589999999988887766 2 457777665554 3333 47888999999887765 7888999999999999
Q ss_pred EEecc
Q 014742 316 FSGVP 320 (419)
Q Consensus 316 l~~~P 320 (419)
+...+
T Consensus 96 il~~~ 100 (471)
T PRK07787 96 WLGPA 100 (471)
T ss_pred EEecC
Confidence 88865
No 312
>PF02729 OTCace_N: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; InterPro: IPR006132 This entry contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and may also play a role in trimerization of the molecules []. The carboxyl-terminal, aspartate/ornithine-binding domain is is described by IPR006131 from INTERPRO. ; GO: 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 2P2G_D 2I6U_A 2YFK_B 3D6N_B 3SDS_A 3GD5_A 3R7L_B 3R7F_A 3R7D_A ....
Probab=23.48 E-value=4.1e+02 Score=21.62 Aligned_cols=97 Identities=9% Similarity=0.013 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHhC---CCCCCCeEEEEcC-CchhHHHH-HHHHHHcCCeEEeeccCC-------ChhHHHHHHhhcC
Q 014742 82 EVYDAAIRFGSAMRSR---GVNPGDRCGIYGS-NCPEWIIA-MEACNSQAITYVPLYDTL-------GANAVEFIINHAE 149 (419)
Q Consensus 82 el~~~~~~la~~L~~~---g~~~gd~V~l~~~-n~~~~~~~-~lA~~~~G~~~vpl~~~~-------~~~~l~~~l~~~~ 149 (419)
.|.+.+..+-...... ..-.|..|++++. +|..--.. -.|+.++|+.++-+++.. +.++...+|...
T Consensus 16 ~ll~~A~~lk~~~~~~~~~~~l~gk~v~~lF~e~StRTR~SFe~A~~~LGg~~i~~~~~~s~~~k~Esl~Dtar~ls~~- 94 (142)
T PF02729_consen 16 ALLDLAKELKAAPKKGKPSQLLKGKTVALLFFEPSTRTRLSFEAAANRLGGHVIYLDPSTSSLGKGESLEDTARVLSRY- 94 (142)
T ss_dssp HHHHHHHHHHHHHHTTCCTTTTTTCEEEEEESS--HHHHHHHHHHHHHTTCEEEEEETTTSSTTTSSEHHHHHHHHHHH-
T ss_pred HHHHHHHHHHhhhhcCCCcccCCCCEEEEEecCCCchhhhhHHHhhhcceeEEEEECcccccCcCCCCHHHHHHHHHHh-
Confidence 3444444444444432 3456777776655 66555444 568999999999887543 445667777777
Q ss_pred ceEEEEeCCChhhHhhcCccCCCCccEEEEec
Q 014742 150 VSIAFVQENKIPSILSCLPRCCLYLKTIVSFA 181 (419)
Q Consensus 150 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (419)
+++|++-......+.+.... ..++.+-..+
T Consensus 95 ~D~iv~R~~~~~~~~~~a~~--~~vPVINa~~ 124 (142)
T PF02729_consen 95 VDAIVIRHPSHGALEELAEH--SSVPVINAGD 124 (142)
T ss_dssp CSEEEEEESSHHHHHHHHHH--CSSEEEEEEE
T ss_pred hheEEEEeccchHHHHHHHh--ccCCeEcCcC
Confidence 77777776555544443322 2444444444
No 313
>TIGR01862 N2-ase-Ialpha nitrogenase component I, alpha chain. This model represents the alpha chain of all three varieties (Mo-Fe, V-Fe, and Fe-Fe) of component I of nitrogenase.
Probab=23.23 E-value=7.4e+02 Score=24.55 Aligned_cols=63 Identities=11% Similarity=0.127 Sum_probs=42.1
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCC-ChhHHHHHHhhcCceEEEEeCCChhhH
Q 014742 101 PGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTL-GANAVEFIINHAEVSIAFVQENKIPSI 163 (419)
Q Consensus 101 ~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~-~~~~l~~~l~~~~~~~vi~~~~~~~~~ 163 (419)
.|.+|++.......+.++-+.+..+|..++.+...+ ..+.+...++.....-+++++.....+
T Consensus 316 ~gkrvai~~~~~~~~~~~~~ll~elGm~v~~~~~~~~~~~~~~~~l~~l~~~~~~v~~~~~~e~ 379 (443)
T TIGR01862 316 QGKRVCLYIGGSRLWHWIGSAEEDLGMEVVAVGYEFAHEDDYEKTMKRMGEGTLLIDDPNELEF 379 (443)
T ss_pred cCCeEEEECCchhHHHHHHHHHHHCCCEEEEeccccccHHHHHHHHHhCCCceEEecCCCHHHH
Confidence 488999987766555555557778999998886655 455666677766554555665444333
No 314
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=22.39 E-value=3.1e+02 Score=19.84 Aligned_cols=65 Identities=18% Similarity=0.170 Sum_probs=50.0
Q ss_pred EeeHHHHHHHHHHHHH---HHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceE
Q 014742 77 WLTYQEVYDAAIRFGS---AMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSI 152 (419)
Q Consensus 77 ~~Ty~el~~~~~~la~---~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ 152 (419)
..||.+|.+.-+.+++ +|....++.+|.|+|+--++... .-++.|+...+.+++...++..++++
T Consensus 9 i~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~S-----------y~V~Fl~~~~s~eev~~ele~mga~i 76 (88)
T COG4009 9 IATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTSS-----------YYVVFLEEVESEEEVERELEDMGAEI 76 (88)
T ss_pred heeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCcee-----------EEEEEEeccCCHHHHHHHHHHhCchh
Confidence 5789998887766554 35555778899999998877543 35678899999999999999888754
No 315
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=22.33 E-value=4.6e+02 Score=25.22 Aligned_cols=56 Identities=13% Similarity=0.124 Sum_probs=34.1
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeecc--C----CChhHHHHHHhhc------CceEEEEeC
Q 014742 99 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD--T----LGANAVEFIINHA------EVSIAFVQE 157 (419)
Q Consensus 99 ~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~--~----~~~~~l~~~l~~~------~~~~vi~~~ 157 (419)
+++||.|.+... .+...+.++...|+.++.++. + .+.+.+...++.. ++++|+++.
T Consensus 99 ~~~gd~Vlv~~~---~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~ 166 (387)
T PRK09331 99 CKKGDYVVLDGL---AHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTH 166 (387)
T ss_pred cCCCCEEEECCC---chHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEEC
Confidence 367888766432 333344566777887776654 1 4566777777643 567777653
No 316
>PLN02550 threonine dehydratase
Probab=22.07 E-value=9.1e+02 Score=25.13 Aligned_cols=58 Identities=7% Similarity=-0.056 Sum_probs=41.1
Q ss_pred CCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCC
Q 014742 98 GVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (419)
Q Consensus 98 g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (419)
...+| .|. ...+=.-....++|..+|+.+..+-|...+......++..++.++++...
T Consensus 155 ~~~~G-VV~--aSaGNhAqgvA~aA~~lGika~IvmP~~tp~~Kv~~~r~~GAeVvl~g~~ 212 (591)
T PLN02550 155 QLDKG-VIC--SSAGNHAQGVALSAQRLGCDAVIAMPVTTPEIKWQSVERLGATVVLVGDS 212 (591)
T ss_pred cCCCC-EEE--ECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 34455 444 34444445566789999987776667666677788889999999999864
No 317
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=21.96 E-value=2.7e+02 Score=27.18 Aligned_cols=27 Identities=19% Similarity=0.190 Sum_probs=14.5
Q ss_pred CHHHHHHHhhhhcCeEEEecchHHHHH
Q 014742 300 DVRYLMEDIQELKPTMFSGVPRVYDRI 326 (419)
Q Consensus 300 ~~~~~~~~i~~~~~t~l~~~P~~~~~l 326 (419)
+.+.+.+.+.+.+-....+.|...+..
T Consensus 251 ~~~~l~~~~~~~~~~~~~~~~~~~Q~a 277 (393)
T COG0436 251 PPEELIAALRKLKSYLTSCAPTPAQYA 277 (393)
T ss_pred ChHHHHHHHHHHHHhcccCCCHHHHHH
Confidence 335555555555555555555555544
No 318
>PF00156 Pribosyltran: Phosphoribosyl transferase domain; InterPro: IPR000836 The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate. Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage []. This includes a range of diverse phosphoribosyl transferase enzymes including adenine phosphoribosyltransferase (2.4.2.7 from EC); hypoxanthine-guanine-xanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase (2.4.2.8 from EC); ribose-phosphate pyrophosphokinase (2.7.6.1 from EC); amidophosphoribosyltransferase (2.4.2.14 from EC); orotate phosphoribosyltransferase (2.4.2.10 from EC);uracil phosphoribosyltransferase (2.4.2.9 from EC); and xanthine-guanine phosphoribosyltransferase (2.4.2.22 from EC). Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes. Members of PRT are defined by the protein fold and by a short 13-residue sequence motif, The motif consists of four hydrophobic amino acids, two acidic amino acids and seven amino acids of variable character, usually including glycine and threonine. The motif has been predicted to be a PRPP-binding site in advance of structural information [, ]. Apart of this motif, different PRT proteins have a low level of sequence identity, less than 15%. The PRT sequence motif is only found in PRTases from the nucleotide synthesis and salvage pathways. Other PRTases, from the tryptophan, histidine and nicotinamide synthetic and salvage pathways, lack the PRT sequence motif and appear to be unrelated to each other and unrelated to the PRT family.; GO: 0009116 nucleoside metabolic process; PDB: 2JBH_A 1Y0B_D 2FXV_B 1GPH_1 1AO0_D 1ORO_B 1VCH_C 2WNS_A 2PRZ_B 2PS1_A ....
Probab=21.73 E-value=2.6e+02 Score=21.51 Aligned_cols=52 Identities=13% Similarity=0.096 Sum_probs=32.7
Q ss_pred eEeeHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEE
Q 014742 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYV 130 (419)
Q Consensus 76 ~~~Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v 130 (419)
..++|.++...++.++..|.+.+..... |.-+...+ +..+...+..++....
T Consensus 3 i~~~~~~~~~~~~~la~~i~~~~~~~~~-ivgi~~~G--~~~a~~la~~l~~~~~ 54 (125)
T PF00156_consen 3 IILSPEQIEALAERLAEQIKESGFDFDV-IVGIPRGG--IPLAAALARALGIPLV 54 (125)
T ss_dssp EEEBHHHHHHHHHHHHHHHHHHTTTSSE-EEEETTTT--HHHHHHHHHHHTHEEE
T ss_pred EEEcHHHHHHHHHHHHHHHHHhCCCCCE-EEeehhcc--HHHHHHHHHHhCCCcc
Confidence 3589999999999999999988654333 22222333 3444444445554433
No 319
>PF11285 DUF3086: Protein of unknown function (DUF3086); InterPro: IPR021437 This family of proteins with unknown function appears to be restricted to Cyanobacteria.
Probab=21.70 E-value=2.4e+02 Score=25.46 Aligned_cols=73 Identities=19% Similarity=0.372 Sum_probs=50.8
Q ss_pred cCeEEEecchHHHHHHHHHHHHhhccCchHHHHHHHHHHhhhhhhccCCCCCCchhhHHHHHHHHHHHHhCCcEeEEEEc
Q 014742 312 KPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSG 391 (419)
Q Consensus 312 ~~t~l~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~lr~v~~~ 391 (419)
+|+ +++.|+-+++-++- .-.+.+-+|.|+.-.++....|+....+-....-..+=++++-|.+++.++.+
T Consensus 126 ~PD-yYg~PWqLRRtfe~---------~hae~v~~WFF~qGGRGA~~S~GSRlqNiLvasa~isIL~~LYGdr~~tLVLA 195 (283)
T PF11285_consen 126 QPD-YYGPPWQLRRTFEP---------IHAERVEDWFFNQGGRGAQRSMGSRLQNILVASAAISILGELYGDRFQTLVLA 195 (283)
T ss_pred CCC-ccCChHHHHhcccH---------HHHHHHHHHHhccCCCcccccccchHHHHHHHHHHHHHHHHHhccceeeeeec
Confidence 444 47889988886552 22345667777766666655555555555666777788889999999999998
Q ss_pred cCC
Q 014742 392 AAP 394 (419)
Q Consensus 392 G~~ 394 (419)
+.|
T Consensus 196 ~~P 198 (283)
T PF11285_consen 196 NSP 198 (283)
T ss_pred CCh
Confidence 854
No 320
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=21.67 E-value=6.7e+02 Score=23.43 Aligned_cols=57 Identities=9% Similarity=-0.154 Sum_probs=38.9
Q ss_pred CCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCC
Q 014742 102 GDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK 159 (419)
Q Consensus 102 gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~ 159 (419)
++.|.... .+-.-..+.++|...|..+..+-|..........++..++++++++...
T Consensus 70 ~~~vv~~S-sGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~GA~Vi~~~~~~ 126 (324)
T cd01563 70 VKAVACAS-TGNTSASLAAYAARAGIKCVVFLPAGKALGKLAQALAYGATVLAVEGNF 126 (324)
T ss_pred CCEEEEeC-CCHHHHHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHcCCEEEEECCcH
Confidence 45554442 3333344457888899877766665556677888999999999998743
No 321
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=21.58 E-value=5.3e+02 Score=25.52 Aligned_cols=86 Identities=14% Similarity=0.041 Sum_probs=53.8
Q ss_pred CCCCCCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCCChhhHhhcCccC--CCCc
Q 014742 97 RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRC--CLYL 174 (419)
Q Consensus 97 ~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~--~~~~ 174 (419)
.|+..|++++++...+....-. +.....-...-+-..+.++....|+..+|.+++.....+..+.+...+. ...+
T Consensus 138 ~g~~~g~r~a~~~~~~~~ly~~---~~~~~~~~~~~~l~~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~~~~ 214 (430)
T TIGR02304 138 DGLFAKHRIAFFLRADNNLYQS---VNNRWISLDFFDLLAPFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELTIKP 214 (430)
T ss_pred cccccCCcEEEEEccChhHHHH---HHhccceeeecCCCcCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCCCCc
Confidence 3888999999995433322221 2222321333344466888899999999999999988766555543221 1356
Q ss_pred cEEEEecCCCh
Q 014742 175 KTIVSFANVSS 185 (419)
Q Consensus 175 ~~~~~~~~~~~ 185 (419)
+.+++.++.-.
T Consensus 215 k~ii~~~E~l~ 225 (430)
T TIGR02304 215 KKVISVAEVLE 225 (430)
T ss_pred eEEEEccCCCC
Confidence 67777766443
No 322
>PF07722 Peptidase_C26: Peptidase C26; InterPro: IPR011697 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyse the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to IPR000991 from INTERPRO, but contain extensions in four loops and at the C terminus []. They belong to MEROPS peptidase family C26 (gamma-glutamyl hydrolase family), clan PC. The majority of the sequences are classified as unassigned peptidases. ; GO: 0016787 hydrolase activity, 0006541 glutamine metabolic process; PDB: 1L9X_A 3FIJ_D.
Probab=21.04 E-value=1.5e+02 Score=26.20 Aligned_cols=39 Identities=8% Similarity=0.153 Sum_probs=25.9
Q ss_pred HHHHHHcCCeEEeeccCCChhHHHHHHhhcCceEEEEeCC
Q 014742 119 MEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (419)
Q Consensus 119 ~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~ 158 (419)
.=++..+|+.+++|.+..+.+++..+++.++ -+|++-..
T Consensus 30 v~~i~~aG~~pv~ip~~~~~~~~~~~l~~id-Glll~GG~ 68 (217)
T PF07722_consen 30 VKAIEAAGGRPVPIPYDADDEELDELLDRID-GLLLPGGG 68 (217)
T ss_dssp HHHHHHTT-EEEEE-SS--HHHHHHHHHCSS-EEEE---S
T ss_pred HHHHHHcCCEEEEEccCCCHHHHHHHHhhcC-EEEEcCCc
Confidence 3467888999999999999999999999876 45555444
No 323
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=20.65 E-value=2.9e+02 Score=21.27 Aligned_cols=40 Identities=15% Similarity=0.047 Sum_probs=30.0
Q ss_pred HHHHHHHhCCCCCCCeEEEEcCC-chhHHHHHHHHHHcCCe
Q 014742 89 RFGSAMRSRGVNPGDRCGIYGSN-CPEWIIAMEACNSQAIT 128 (419)
Q Consensus 89 ~la~~L~~~g~~~gd~V~l~~~n-~~~~~~~~lA~~~~G~~ 128 (419)
.+.+.+...|+.+++.|.+++.. +.....+.+.+...|..
T Consensus 66 ~~~~~~~~~~~~~~~~vv~~c~~g~~~a~~~~~~l~~~G~~ 106 (122)
T cd01448 66 EFAELLGSLGISNDDTVVVYDDGGGFFAARAWWTLRYFGHE 106 (122)
T ss_pred HHHHHHHHcCCCCCCEEEEECCCCCccHHHHHHHHHHcCCC
Confidence 44555667788899999999988 46666666777778864
No 324
>PF07994 NAD_binding_5: Myo-inositol-1-phosphate synthase; InterPro: IPR002587 1L-myo-Inositol-1-phosphate synthase (5.5.1.4 from EC) catalyzes the conversion of D-glucose 6-phosphate to 1L-myo-inositol-1-phosphate, the first committed step in the production of all inositol-containing compounds, including phospholipids, either directly or by salvage. The enzyme exists in a cytoplasmic form in a wide range of plants, animals, and fungi. It has also been detected in several bacteria and a chloroplast form is observed in alga and higher plants. Inositol phosphates play an important role in signal transduction. In Saccharomyces cerevisiae (Baker's yeast), the transcriptional regulation of the INO1 gene has been studied in detail [] and its expression is sensitive to the availability of phospholipid precursors as well as growth phase. The regulation of the structural gene encoding 1L-myo-inositol-1-phosphate synthase has also been analyzed at the transcriptional level in the aquatic angiosperm, Spirodela polyrrhiza (Giant duckweed) and the halophyte, Mesembryanthemum crystallinum (Common ice plant) [].; GO: 0004512 inositol-3-phosphate synthase activity, 0006021 inositol biosynthetic process, 0008654 phospholipid biosynthetic process; PDB: 1GR0_A 1P1K_B 1LA2_B 1RM0_B 1P1I_B 1JKF_A 1P1F_A 1P1J_B 1JKI_B 1P1H_A ....
Probab=20.50 E-value=7e+02 Score=23.25 Aligned_cols=71 Identities=10% Similarity=0.012 Sum_probs=47.8
Q ss_pred eHHHHHHHHHHHHHHHHhCCCCCCCeEEEEcCCchh----------------------------HHHHHHHHHHcCCeEE
Q 014742 79 TYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE----------------------------WIIAMEACNSQAITYV 130 (419)
Q Consensus 79 Ty~el~~~~~~la~~L~~~g~~~gd~V~l~~~n~~~----------------------------~~~~~lA~~~~G~~~v 130 (419)
.+.++.+....+...+++.|+ ...|.+.+-+.-. ..+..+|+++.|+.++
T Consensus 127 ~~~~~e~~~~DI~~f~~~~~~--d~vVvvn~asTE~~~~~~~~~~~t~~~l~~al~~~~~~~~aS~~YA~AAl~~g~~fv 204 (295)
T PF07994_consen 127 KREQVEQIREDIRDFKKENGL--DRVVVVNVASTERYIPVIPGVHDTLEALEKALDENDPEISASMLYAYAALEAGVPFV 204 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHTT---SCEEEEE-SSCC-S---CCCCCSSHHHHHHHHHTT-TTHHHHHHHHHHHHHTTEEEE
T ss_pred hHHHHHHHHHHHHHHHHHhCC--CcEEEEECCCCCCCCCCCccccCCHHHHHHHhhcCCCcCChHHHHHHHHHHCCCCeE
Confidence 455566667778888888876 4667776665544 3455679999999999
Q ss_pred eeccCCCh--hHHHHHHhhcCce
Q 014742 131 PLYDTLGA--NAVEFIINHAEVS 151 (419)
Q Consensus 131 pl~~~~~~--~~l~~~l~~~~~~ 151 (419)
---|.... ..+..+.++.+..
T Consensus 205 N~tP~~~a~~P~l~ela~~~gvp 227 (295)
T PF07994_consen 205 NGTPSNIADDPALVELAEEKGVP 227 (295)
T ss_dssp E-SSSTTTTSHHHHHHHHHHTEE
T ss_pred eccCccccCCHHHHHHHHHcCCC
Confidence 88777766 5677777776654
No 325
>PRK14057 epimerase; Provisional
Probab=20.15 E-value=6.6e+02 Score=22.84 Aligned_cols=64 Identities=11% Similarity=0.051 Sum_probs=45.2
Q ss_pred HHHHHhCCCCCCCeEEEEcCCchhHHHHHHHHHHcCC----------eEEeeccCCChhHHHHHHhhcCceEEEEeC
Q 014742 91 GSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAI----------TYVPLYDTLGANAVEFIINHAEVSIAFVQE 157 (419)
Q Consensus 91 a~~L~~~g~~~gd~V~l~~~n~~~~~~~~lA~~~~G~----------~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~ 157 (419)
...+.+.| .|.|.+....+....-.+-.+-..|+ .-+.|+|..+.+.+..++...+--+|.+-.
T Consensus 91 i~~~~~aG---ad~It~H~Ea~~~~~~~l~~Ir~~G~k~~~~~~~~kaGlAlnP~Tp~e~i~~~l~~vD~VLvMtV~ 164 (254)
T PRK14057 91 AQACVKAG---AHCITLQAEGDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAVN 164 (254)
T ss_pred HHHHHHhC---CCEEEEeeccccCHHHHHHHHHHcCCCcccccccceeEEEECCCCCHHHHHHHHHhCCEEEEEEEC
Confidence 33444444 57888888876555555556666775 678889999999999999888766666553
No 326
>TIGR01284 alt_nitrog_alph nitrogenase alpha chain. This model represents the alpha chains of various forms of the nitrogen-fixing enzyme nitrogenase: vanadium-iron, iron-iron, and molybdenum-iron. Most examples of NifD, the molybdenum-iron type nitrogenase alpha chain, are excluded from this model and described instead by equivalog model TIGR01282. It appears by phylogenetic and UPGMA trees that this model represents a distinct clade of NifD homologs, in which arose several molybdenum-independent forms.
Probab=20.06 E-value=8.1e+02 Score=24.44 Aligned_cols=63 Identities=10% Similarity=0.168 Sum_probs=40.3
Q ss_pred CCCeEEEEcCCchhHHHHHHHHHHcCCeEEeeccCC-ChhHHHHHHhhcCceEEEEeCCChhhH
Q 014742 101 PGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTL-GANAVEFIINHAEVSIAFVQENKIPSI 163 (419)
Q Consensus 101 ~gd~V~l~~~n~~~~~~~~lA~~~~G~~~vpl~~~~-~~~~l~~~l~~~~~~~vi~~~~~~~~~ 163 (419)
.|.+|++....+..+..+-+....+|..++.+.... ..+.+..++.......+++++.....+
T Consensus 324 ~GkrvaI~~~~~~~~~l~~~l~~ElGmevv~~~~~~~~~~~~~~~~~~~~~~~~~i~d~~~~e~ 387 (457)
T TIGR01284 324 RGKKVWVWSGGPKLWHWPRPLEDELGMEVVAVSTKFGHEDDYEKIIARVREGTVIIDDPNELEL 387 (457)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEEEEeCCHHHHHHHHHhcCCCeEEEeCCCHHHH
Confidence 489999988775444444333346999888775544 466677777776655566665544333
Done!