Your job contains 1 sequence.
>014743
MAAVGIETKQPESAAPEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQ
RNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKI
TPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP
IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS
RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASN
KIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKI
AEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014743
(419 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2147670 - symbol:RPT6A "regulatory particle tr... 1945 5.8e-201 1
TAIR|locus:2147685 - symbol:AT5G20000 species:3702 "Arabi... 1905 1.0e-196 1
UNIPROTKB|Q4RG45 - symbol:GSTENG00035021001 "Chromosome 2... 1641 9.4e-169 1
ZFIN|ZDB-GENE-030131-6547 - symbol:psmc5 "proteasome (pro... 1637 2.5e-168 1
UNIPROTKB|P62194 - symbol:PSMC5 "26S protease regulatory ... 1635 4.1e-168 1
UNIPROTKB|P62195 - symbol:PSMC5 "26S protease regulatory ... 1635 4.1e-168 1
UNIPROTKB|P62197 - symbol:PSMC5 "26S protease regulatory ... 1635 4.1e-168 1
MGI|MGI:105047 - symbol:Psmc5 "protease (prosome, macropa... 1635 4.1e-168 1
RGD|708376 - symbol:Psmc5 "proteasome (prosome, macropain... 1635 4.1e-168 1
UNIPROTKB|F1NU79 - symbol:PSMC5 "Uncharacterized protein"... 1632 8.5e-168 1
UNIPROTKB|Q6AZU7 - symbol:Q6AZU7 "Putative uncharacterize... 1627 2.9e-167 1
UNIPROTKB|Q6P380 - symbol:psmc5 "Putative uncharacterized... 1625 4.7e-167 1
DICTYBASE|DDB_G0292382 - symbol:psmC5 "HIV TAT binding-pr... 1624 6.0e-167 1
FB|FBgn0020369 - symbol:Rpt6 "Regulatory particle triple-... 1624 6.0e-167 1
UNIPROTKB|P46470 - symbol:psmc5 "26S protease regulatory ... 1610 1.8e-165 1
FB|FBgn0039788 - symbol:Rpt6R "Regulatory particle triple... 1587 5.0e-163 1
POMBASE|SPBC23G7.12c - symbol:rpt6 "19S proteasome regula... 1564 1.4e-160 1
GENEDB_PFALCIPARUM|PFL2345c - symbol:PFL2345c "tat-bindin... 1544 1.8e-158 1
UNIPROTKB|Q8I4U5 - symbol:PFL2345c "Tat-binding protein h... 1544 1.8e-158 1
WB|WBGene00004506 - symbol:rpt-6 species:6239 "Caenorhabd... 1538 7.7e-158 1
CGD|CAL0006022 - symbol:RPT6 species:5476 "Candida albica... 1514 2.7e-155 1
SGD|S000003016 - symbol:RPT6 "ATPase of the 19S regulator... 1487 2.0e-152 1
WB|WBGene00018991 - symbol:F56F11.4 species:6239 "Caenorh... 1485 3.2e-152 1
ASPGD|ASPL0000064945 - symbol:AN6988 species:162425 "Emer... 1464 5.4e-150 1
UNIPROTKB|J3QSA9 - symbol:PSMC5 "26S protease regulatory ... 1020 6.0e-103 1
UNIPROTKB|E2RM61 - symbol:PSMC5 "Uncharacterized protein"... 996 2.1e-100 1
UNIPROTKB|J3KRP2 - symbol:PSMC5 "26S protease regulatory ... 958 2.2e-96 1
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 897 6.5e-90 1
FB|FBgn0015282 - symbol:Rpt2 "Regulatory particle triple-... 887 7.5e-89 1
UNIPROTKB|F1NSP7 - symbol:PSMC1 "26S protease regulatory ... 882 2.5e-88 1
UNIPROTKB|F1NTZ4 - symbol:PSMC1 "26S protease regulatory ... 882 2.5e-88 1
UNIPROTKB|A4FUZ3 - symbol:PSMC1 "Proteasome (Prosome, mac... 880 4.1e-88 1
UNIPROTKB|F1PQ40 - symbol:PSMC1 "Uncharacterized protein"... 880 4.1e-88 1
UNIPROTKB|P62191 - symbol:PSMC1 "26S protease regulatory ... 880 4.1e-88 1
UNIPROTKB|F2Z5J1 - symbol:PSMC1 "Uncharacterized protein"... 880 4.1e-88 1
MGI|MGI:106054 - symbol:Psmc1 "protease (prosome, macropa... 880 4.1e-88 1
RGD|621097 - symbol:Psmc1 "proteasome (prosome, macropain... 880 4.1e-88 1
ZFIN|ZDB-GENE-030131-304 - symbol:psmc6 "proteasome (pros... 879 5.3e-88 1
UNIPROTKB|Q90732 - symbol:PSMC1 "26S protease regulatory ... 876 1.1e-87 1
UNIPROTKB|B4DR63 - symbol:PSMC1 "cDNA FLJ58247, highly si... 876 1.1e-87 1
DICTYBASE|DDB_G0270784 - symbol:psmC1 "TAT binding protei... 874 1.8e-87 1
UNIPROTKB|F1NCS8 - symbol:PSMC6 "Uncharacterized protein"... 872 2.9e-87 1
UNIPROTKB|Q5ZKX2 - symbol:PSMC6 "Uncharacterized protein"... 872 2.9e-87 1
WB|WBGene00004502 - symbol:rpt-2 species:6239 "Caenorhabd... 872 2.9e-87 1
ZFIN|ZDB-GENE-040625-69 - symbol:psmc1b "proteasome (pros... 871 3.7e-87 1
ZFIN|ZDB-GENE-030131-8730 - symbol:psmc1a "proteasome (pr... 869 6.0e-87 1
UNIPROTKB|F1MLV1 - symbol:PSMC6 "26S protease regulatory ... 867 9.9e-87 1
UNIPROTKB|J9P1N0 - symbol:PSMC6 "Uncharacterized protein"... 867 9.9e-87 1
UNIPROTKB|P62333 - symbol:PSMC6 "26S protease regulatory ... 867 9.9e-87 1
UNIPROTKB|F1SFE6 - symbol:PSMC6 "Uncharacterized protein"... 867 9.9e-87 1
UNIPROTKB|P62335 - symbol:PSMC6 "26S protease regulatory ... 867 9.9e-87 1
MGI|MGI:1914339 - symbol:Psmc6 "proteasome (prosome, macr... 867 9.9e-87 1
RGD|2318218 - symbol:LOC100365869 "proteasome (prosome, m... 867 9.9e-87 1
RGD|1308825 - symbol:Psmc6 "proteasome (prosome, macropai... 866 1.3e-86 1
UNIPROTKB|Q5R8D7 - symbol:PSMC2 "26S protease regulatory ... 865 1.6e-86 1
TAIR|locus:2024822 - symbol:RPT1A "regulatory particle tr... 865 1.6e-86 1
FB|FBgn0028687 - symbol:Rpt1 "Regulatory particle triple-... 864 2.0e-86 1
UNIPROTKB|E1C4V5 - symbol:PSMC2 "Uncharacterized protein"... 863 2.6e-86 1
UNIPROTKB|F1NFL8 - symbol:PSMC2 "Uncharacterized protein"... 863 2.6e-86 1
UNIPROTKB|Q2KIW6 - symbol:PSMC6 "26S protease regulatory ... 863 2.6e-86 1
UNIPROTKB|Q5E9F9 - symbol:PSMC2 "26S protease regulatory ... 863 2.6e-86 1
UNIPROTKB|F1PPH7 - symbol:PSMC2 "Uncharacterized protein"... 863 2.6e-86 1
UNIPROTKB|P35998 - symbol:PSMC2 "26S protease regulatory ... 863 2.6e-86 1
UNIPROTKB|F1SB53 - symbol:PSMC2 "Uncharacterized protein"... 863 2.6e-86 1
UNIPROTKB|P46472 - symbol:psmc2 "26S protease regulatory ... 863 2.6e-86 1
UNIPROTKB|Q4R4R0 - symbol:PSMC2 "26S protease regulatory ... 863 2.6e-86 1
MGI|MGI:109555 - symbol:Psmc2 "proteasome (prosome, macro... 863 2.6e-86 1
ZFIN|ZDB-GENE-040426-1327 - symbol:psmc2 "proteasome (pro... 863 2.6e-86 1
GENEDB_PFALCIPARUM|PF10_0081 - symbol:PF10_0081 "26S prot... 859 6.9e-86 1
UNIPROTKB|Q8IJW0 - symbol:PF10_0081 "26S proteasome regul... 859 6.9e-86 1
UNIPROTKB|I3LJ30 - symbol:I3LJ30 "Uncharacterized protein... 857 1.1e-85 1
RGD|3428 - symbol:Psmc2 "proteasome (prosome, macropain) ... 856 1.4e-85 1
UNIPROTKB|Q63347 - symbol:Psmc2 "26S protease regulatory ... 856 1.4e-85 1
WB|WBGene00004501 - symbol:rpt-1 species:6239 "Caenorhabd... 855 1.8e-85 1
UNIPROTKB|Q18787 - symbol:rpt-1 "26S protease regulatory ... 855 1.8e-85 1
TAIR|locus:2061639 - symbol:RPT2b "regulatory particle AA... 854 2.4e-85 1
TAIR|locus:2119926 - symbol:RPT2a "regulatory particle AA... 853 3.0e-85 1
POMBASE|SPBC4.07c - symbol:rpt2 "19S proteasome regulator... 849 8.0e-85 1
WB|WBGene00004504 - symbol:rpt-4 species:6239 "Caenorhabd... 849 8.0e-85 1
UNIPROTKB|O17071 - symbol:rpt-4 "Probable 26S protease re... 849 8.0e-85 1
ASPGD|ASPL0000032311 - symbol:AN5747 species:162425 "Emer... 846 1.7e-84 1
TAIR|locus:2028200 - symbol:AT1G45000 species:3702 "Arabi... 846 1.7e-84 1
TAIR|locus:2159996 - symbol:RPT4A "regulatory particle tr... 846 1.7e-84 1
CGD|CAL0005257 - symbol:RPT2 species:5476 "Candida albica... 845 2.1e-84 1
UNIPROTKB|B7Z5E2 - symbol:PSMC2 "cDNA FLJ52353, highly si... 845 2.1e-84 1
SGD|S000002165 - symbol:RPT2 "ATPase of the 19S regulator... 845 2.1e-84 1
GENEDB_PFALCIPARUM|PF13_0033 - symbol:PF13_0033 "26S prot... 844 2.7e-84 1
UNIPROTKB|Q8IEQ1 - symbol:PF13_0033 "26S proteasome regul... 844 2.7e-84 1
FB|FBgn0028685 - symbol:Rpt4 "Regulatory particle triple-... 842 4.4e-84 1
DICTYBASE|DDB_G0276917 - symbol:psmC2 "26S proteasome ATP... 840 7.2e-84 1
FB|FBgn0036224 - symbol:Rpt4R "Regulatory particle triple... 836 1.9e-83 1
ASPGD|ASPL0000049719 - symbol:AN2213 species:162425 "Emer... 833 3.9e-83 1
UNIPROTKB|J3QLH6 - symbol:PSMC5 "26S protease regulatory ... 831 6.4e-83 1
POMBASE|SPBC16C6.07c - symbol:rpt1 "19S proteasome regula... 831 6.4e-83 1
CGD|CAL0005689 - symbol:RPT1 species:5476 "Candida albica... 829 1.0e-82 1
SGD|S000001628 - symbol:RPT1 "ATPase of the 19S regulator... 828 1.3e-82 1
DICTYBASE|DDB_G0284517 - symbol:psmC6 "26S protease regul... 826 2.2e-82 1
ASPGD|ASPL0000034636 - symbol:AN2917 species:162425 "Emer... 817 2.0e-81 1
UNIPROTKB|Q9FXT8 - symbol:OsRPT4 "Os02g0199900 protein" s... 812 6.6e-81 1
TAIR|locus:2079742 - symbol:RPT5A "regulatory particle tr... 785 1.1e-80 2
WARNING: Descriptions of 660 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 1945 (689.7 bits), Expect = 5.8e-201, P = 5.8e-201
Identities = 385/420 (91%), Positives = 400/420 (95%)
Query: 1 MAAVGIETKQPESAAPEEVCAAKGAS-KQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEA 59
MAAVG+++++PE+A EE C KGA+ KQGEGL+QYYLQHIHELQ Q+RQKT+NLNRLEA
Sbjct: 1 MAAVGVDSRRPETAM-EETCNVKGAAAKQGEGLKQYYLQHIHELQRQLRQKTNNLNRLEA 59
Query: 60 QRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXX 119
QRNELNSRVRML+EELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVV
Sbjct: 60 QRNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITK 119
Query: 120 XXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIEL 179
PSTRVALRNDSYVLHL+LPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIEL
Sbjct: 120 ITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIEL 179
Query: 180 PIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEG 239
PIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEG
Sbjct: 180 PIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEG 239
Query: 240 SRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS 299
SRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS
Sbjct: 240 SRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS 299
Query: 300 NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKK 359
NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR DILKIHSR+MNLMRGIDLKK
Sbjct: 300 NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKK 359
Query: 360 IAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
IAEKMNGASGAELKAVCTEAGMFALRERR+HVTQEDFEMAVAKVMKK+TEKNMSLRKLWK
Sbjct: 360 IAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKDTEKNMSLRKLWK 419
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 1905 (675.7 bits), Expect = 1.0e-196, P = 1.0e-196
Identities = 379/420 (90%), Positives = 393/420 (93%)
Query: 1 MAAVGIETKQPESAAPEEVCAAKGAS-KQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEA 59
MAAVG+E + P +A EE C KGA+ KQGEGL +YYLQH+ ELQ R+K++NLNRLEA
Sbjct: 1 MAAVGVEARPPVTAM-EETCNVKGAAAKQGEGLNKYYLQHLDELQRLQREKSYNLNRLEA 59
Query: 60 QRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXX 119
QRNELNSRVRML+EELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVV
Sbjct: 60 QRNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITK 119
Query: 120 XXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIEL 179
PSTRVALRNDSYVLHL+LPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIEL
Sbjct: 120 LTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIEL 179
Query: 180 PIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEG 239
PIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEG
Sbjct: 180 PIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEG 239
Query: 240 SRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS 299
SRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS
Sbjct: 240 SRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS 299
Query: 300 NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKK 359
NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR DILKIHSR+MNLMRGIDLKK
Sbjct: 300 NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKK 359
Query: 360 IAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
IAEKMNGASGAELKAVCTEAGMFALRERR+HVTQEDFEMAVAKVMKK+TEKNMSLRKLWK
Sbjct: 360 IAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKDTEKNMSLRKLWK 419
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 1641 (582.7 bits), Expect = 9.4e-169, P = 9.4e-169
Identities = 322/394 (81%), Positives = 356/394 (90%)
Query: 26 SKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYV 85
SK G GLRQYYL I ELQL V +K+ NL RL+AQRNELN++VR+L+EELQLLQE GSYV
Sbjct: 14 SKGGSGLRQYYLSKIEELQLTVNEKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYV 73
Query: 86 GEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDP 145
GEVV+VM K KVLVKVHPEGK+VV P+ RVALRNDSY LH ILP+KVDP
Sbjct: 74 GEVVRVMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDP 133
Query: 146 LVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPG 205
LV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHPELFE+LGIAQPKGVLLYGPPG
Sbjct: 134 LVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPG 193
Query: 206 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDS 265
TGKTLLARAVAHHTDCTFIRVSGSELVQK+IGEG+RMVRELFVMAREHAPSIIFMDEIDS
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDS 253
Query: 266 IGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRID 325
IGS+R+E GSG GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRIDILD ALLRPGRID
Sbjct: 254 IGSSRLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRID 312
Query: 326 RKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALR 385
RKIEFP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+ALR
Sbjct: 313 RKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 372
Query: 386 ERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
ERR+HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct: 373 ERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 406
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 1637 (581.3 bits), Expect = 2.5e-168, P = 2.5e-168
Identities = 321/394 (81%), Positives = 355/394 (90%)
Query: 26 SKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYV 85
SK G GLRQYYL I ELQL V +K+ NL RL+AQRNELN++VR+L+EELQLLQE GSYV
Sbjct: 14 SKGGSGLRQYYLSKIEELQLTVNEKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYV 73
Query: 86 GEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDP 145
GEVV+ M K KVLVKVHPEGK+VV P+ RVALRNDSY LH ILP+KVDP
Sbjct: 74 GEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDP 133
Query: 146 LVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPG 205
LV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHPELFE+LGIAQPKGVLLYGPPG
Sbjct: 134 LVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPG 193
Query: 206 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDS 265
TGKTLLARAVAHHTDCTFIRVSGSELVQK+IGEG+RMVRELFVMAREHAPSIIFMDEIDS
Sbjct: 194 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDS 253
Query: 266 IGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRID 325
IGS+R+E GSG GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRIDILD ALLRPGRID
Sbjct: 254 IGSSRLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRID 312
Query: 326 RKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALR 385
RKIEFP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+ALR
Sbjct: 313 RKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 372
Query: 386 ERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
ERR+HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct: 373 ERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 406
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 1635 (580.6 bits), Expect = 4.1e-168, P = 4.1e-168
Identities = 323/404 (79%), Positives = 359/404 (88%)
Query: 16 PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEEL 75
PE++ +G K G GLRQYYL I ELQL V K+ NL RL+AQRNELN++VR+L+EEL
Sbjct: 6 PEQMELEEG--KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREEL 63
Query: 76 QLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVL 135
QLLQE GSYVGEVV+ M K KVLVKVHPEGK+VV P+ RVALRNDSY L
Sbjct: 64 QLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTL 123
Query: 136 HLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQP 195
H ILP+KVDPLV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHPELFE+LGIAQP
Sbjct: 124 HKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQP 183
Query: 196 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAP 255
KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK+IGEG+RMVRELFVMAREHAP
Sbjct: 184 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 243
Query: 256 SIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILD 315
SIIFMDEIDSIGS+R+E GSG GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRIDILD
Sbjct: 244 SIIFMDEIDSIGSSRLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 302
Query: 316 QALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAV 375
ALLRPGRIDRKIEFP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K V
Sbjct: 303 SALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGV 362
Query: 376 CTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
CTEAGM+ALRERR+HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct: 363 CTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 406
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 1635 (580.6 bits), Expect = 4.1e-168, P = 4.1e-168
Identities = 323/404 (79%), Positives = 359/404 (88%)
Query: 16 PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEEL 75
PE++ +G K G GLRQYYL I ELQL V K+ NL RL+AQRNELN++VR+L+EEL
Sbjct: 6 PEQMELEEG--KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREEL 63
Query: 76 QLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVL 135
QLLQE GSYVGEVV+ M K KVLVKVHPEGK+VV P+ RVALRNDSY L
Sbjct: 64 QLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTL 123
Query: 136 HLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQP 195
H ILP+KVDPLV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHPELFE+LGIAQP
Sbjct: 124 HKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQP 183
Query: 196 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAP 255
KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK+IGEG+RMVRELFVMAREHAP
Sbjct: 184 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 243
Query: 256 SIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILD 315
SIIFMDEIDSIGS+R+E GSG GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRIDILD
Sbjct: 244 SIIFMDEIDSIGSSRLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 302
Query: 316 QALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAV 375
ALLRPGRIDRKIEFP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K V
Sbjct: 303 SALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGV 362
Query: 376 CTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
CTEAGM+ALRERR+HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct: 363 CTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 406
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 1635 (580.6 bits), Expect = 4.1e-168, P = 4.1e-168
Identities = 323/404 (79%), Positives = 359/404 (88%)
Query: 16 PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEEL 75
PE++ +G K G GLRQYYL I ELQL V K+ NL RL+AQRNELN++VR+L+EEL
Sbjct: 6 PEQMELEEG--KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREEL 63
Query: 76 QLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVL 135
QLLQE GSYVGEVV+ M K KVLVKVHPEGK+VV P+ RVALRNDSY L
Sbjct: 64 QLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTL 123
Query: 136 HLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQP 195
H ILP+KVDPLV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHPELFE+LGIAQP
Sbjct: 124 HKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQP 183
Query: 196 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAP 255
KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK+IGEG+RMVRELFVMAREHAP
Sbjct: 184 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 243
Query: 256 SIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILD 315
SIIFMDEIDSIGS+R+E GSG GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRIDILD
Sbjct: 244 SIIFMDEIDSIGSSRLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 302
Query: 316 QALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAV 375
ALLRPGRIDRKIEFP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K V
Sbjct: 303 SALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGV 362
Query: 376 CTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
CTEAGM+ALRERR+HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct: 363 CTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 406
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 1635 (580.6 bits), Expect = 4.1e-168, P = 4.1e-168
Identities = 323/404 (79%), Positives = 359/404 (88%)
Query: 16 PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEEL 75
PE++ +G K G GLRQYYL I ELQL V K+ NL RL+AQRNELN++VR+L+EEL
Sbjct: 6 PEQMELEEG--KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREEL 63
Query: 76 QLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVL 135
QLLQE GSYVGEVV+ M K KVLVKVHPEGK+VV P+ RVALRNDSY L
Sbjct: 64 QLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTL 123
Query: 136 HLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQP 195
H ILP+KVDPLV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHPELFE+LGIAQP
Sbjct: 124 HKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQP 183
Query: 196 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAP 255
KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK+IGEG+RMVRELFVMAREHAP
Sbjct: 184 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 243
Query: 256 SIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILD 315
SIIFMDEIDSIGS+R+E GSG GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRIDILD
Sbjct: 244 SIIFMDEIDSIGSSRLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 302
Query: 316 QALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAV 375
ALLRPGRIDRKIEFP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K V
Sbjct: 303 SALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGV 362
Query: 376 CTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
CTEAGM+ALRERR+HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct: 363 CTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 406
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 1635 (580.6 bits), Expect = 4.1e-168, P = 4.1e-168
Identities = 323/404 (79%), Positives = 359/404 (88%)
Query: 16 PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEEL 75
PE++ +G K G GLRQYYL I ELQL V K+ NL RL+AQRNELN++VR+L+EEL
Sbjct: 6 PEQMELEEG--KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREEL 63
Query: 76 QLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVL 135
QLLQE GSYVGEVV+ M K KVLVKVHPEGK+VV P+ RVALRNDSY L
Sbjct: 64 QLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTL 123
Query: 136 HLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQP 195
H ILP+KVDPLV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHPELFE+LGIAQP
Sbjct: 124 HKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQP 183
Query: 196 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAP 255
KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK+IGEG+RMVRELFVMAREHAP
Sbjct: 184 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 243
Query: 256 SIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILD 315
SIIFMDEIDSIGS+R+E GSG GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRIDILD
Sbjct: 244 SIIFMDEIDSIGSSRLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 302
Query: 316 QALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAV 375
ALLRPGRIDRKIEFP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K V
Sbjct: 303 SALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGV 362
Query: 376 CTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
CTEAGM+ALRERR+HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct: 363 CTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 406
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 1632 (579.6 bits), Expect = 8.5e-168, P = 8.5e-168
Identities = 323/404 (79%), Positives = 359/404 (88%)
Query: 16 PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEEL 75
PE++ G K G GLRQYYL I ELQL V +K+ NL RL+AQRNELN++VR+L+EEL
Sbjct: 12 PEQMEMDDG--KGGTGLRQYYLSKIEELQLIVNEKSQNLRRLQAQRNELNAKVRLLREEL 69
Query: 76 QLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVL 135
QLLQE GSYVGEVV+ M K KVLVKVHPEGK+VV P+ RVALRNDSY L
Sbjct: 70 QLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTL 129
Query: 136 HLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQP 195
H ILP+KVDPLV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHPELFE+LGIAQP
Sbjct: 130 HKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQP 189
Query: 196 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAP 255
KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK+IGEG+RMVRELFVMAREHAP
Sbjct: 190 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAP 249
Query: 256 SIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILD 315
SIIFMDEIDSIGS+R+E GSG GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRIDILD
Sbjct: 250 SIIFMDEIDSIGSSRLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILD 308
Query: 316 QALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAV 375
ALLRPGRIDRKIEFP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K V
Sbjct: 309 SALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGV 368
Query: 376 CTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
CTEAGM+ALRERR+HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct: 369 CTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 412
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 1627 (577.8 bits), Expect = 2.9e-167, P = 2.9e-167
Identities = 319/394 (80%), Positives = 354/394 (89%)
Query: 26 SKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYV 85
S+ G GLRQYYL I +LQL V K+ NL RL+AQRNELN++VR+L+EELQLLQE GSYV
Sbjct: 22 SRGGTGLRQYYLSKIEDLQLVVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYV 81
Query: 86 GEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDP 145
GEVV+ M K KVLVKVHPEGK+VV P+ RVALRNDSY LH ILP+KVDP
Sbjct: 82 GEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDP 141
Query: 146 LVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPG 205
LV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHPELFE+LGIAQPKGVLLYGPPG
Sbjct: 142 LVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPG 201
Query: 206 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDS 265
TGKTLLARAVAHHTDCTFIRVSGSELVQK+IGEG+RMVRELFVMAREHAPSIIFMDEIDS
Sbjct: 202 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDS 261
Query: 266 IGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRID 325
IGS+R+E GSG GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRIDILD ALLRPGRID
Sbjct: 262 IGSSRLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRID 320
Query: 326 RKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALR 385
RKIEFP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+ALR
Sbjct: 321 RKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 380
Query: 386 ERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
ERR+HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct: 381 ERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 414
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 1625 (577.1 bits), Expect = 4.7e-167, P = 4.7e-167
Identities = 319/394 (80%), Positives = 354/394 (89%)
Query: 26 SKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYV 85
S+ G GLRQYYL I +LQL V K+ NL RL+AQRNELN++VR+L+EELQLLQE GSYV
Sbjct: 22 SRGGIGLRQYYLSKIEDLQLVVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYV 81
Query: 86 GEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDP 145
GEVV+ M K KVLVKVHPEGK+VV P+ RVALRNDSY LH ILP+KVDP
Sbjct: 82 GEVVRAMDKKKVLVKVHPEGKFVVDIDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDP 141
Query: 146 LVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPG 205
LV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHPELFE+LGIAQPKGVLLYGPPG
Sbjct: 142 LVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPG 201
Query: 206 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDS 265
TGKTLLARAVAHHTDCTFIRVSGSELVQK+IGEG+RMVRELFVMAREHAPSIIFMDEIDS
Sbjct: 202 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDS 261
Query: 266 IGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRID 325
IGS+R+E GSG GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRIDILD ALLRPGRID
Sbjct: 262 IGSSRLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRID 320
Query: 326 RKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALR 385
RKIEFP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+ALR
Sbjct: 321 RKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 380
Query: 386 ERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
ERR+HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct: 381 ERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 414
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 1624 (576.7 bits), Expect = 6.0e-167, P = 6.0e-167
Identities = 313/390 (80%), Positives = 352/390 (90%)
Query: 30 EGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVV 89
+G++ YY I EL+++V +K +L RLEAQRNELN+RVRMLKEELQLL PGS+V EVV
Sbjct: 14 KGIKSYYCSKIEELEIKVNEKAQDLRRLEAQRNELNNRVRMLKEELQLLTNPGSHVAEVV 73
Query: 90 KVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNL 149
K+MGKNKVLVKV+PEGK+VV PSTR AL+++SY LH ILP+K+DPLV+L
Sbjct: 74 KLMGKNKVLVKVNPEGKFVVDIDPTVDIAKLTPSTRAALKHESYTLHRILPNKIDPLVSL 133
Query: 150 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 209
MKVEK+PDSTYDM+GGLD+QIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT
Sbjct: 134 MKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 193
Query: 210 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 269
LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELF+MAREHAPSIIFMDEIDSIGS+
Sbjct: 194 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSS 253
Query: 270 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 329
R ESGSG GDSEVQRTMLELLNQLDGFE++ IKVLM TNRIDILD ALLRPGRIDRKIE
Sbjct: 254 RGESGSGGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIE 313
Query: 330 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 389
FPNP + RLDILKIHSR+MNL RGI+LKKI++KMNGASGAELKAVCTEAGM+ALRERR+
Sbjct: 314 FPNPGDAGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRERRV 373
Query: 390 HVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
HV+QEDFEMAV+KVMKK++E+NMS+ KLWK
Sbjct: 374 HVSQEDFEMAVSKVMKKDSEQNMSINKLWK 403
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 1624 (576.7 bits), Expect = 6.0e-167, P = 6.0e-167
Identities = 319/397 (80%), Positives = 356/397 (89%)
Query: 23 KGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPG 82
+ A +GEG R YY+Q I ELQL V +K NL RL+AQRNELN++VRML+EELQLLQE G
Sbjct: 10 ESAYHKGEGFRSYYIQKIEELQLVVAEKHQNLRRLQAQRNELNAKVRMLREELQLLQEQG 69
Query: 83 SYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSK 142
SYVGEVVK M K KVLVKVHPEGK+VV P+ RVALRN+SY LH ILP+K
Sbjct: 70 SYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNK 129
Query: 143 VDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYG 202
VDPLV+LM VEKVPDSTY+M+GGLD+QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYG
Sbjct: 130 VDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYG 189
Query: 203 PPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDE 262
PPGTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAREHAPSIIFMDE
Sbjct: 190 PPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDE 249
Query: 263 IDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPG 322
IDSIGS+R+ESGSG GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRIDILD ALLRPG
Sbjct: 250 IDSIGSSRIESGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPG 308
Query: 323 RIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMF 382
RIDRKIEFP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+
Sbjct: 309 RIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMY 368
Query: 383 ALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
ALRERR+HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct: 369 ALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 405
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 1610 (571.8 bits), Expect = 1.8e-165, P = 1.8e-165
Identities = 318/394 (80%), Positives = 352/394 (89%)
Query: 26 SKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYV 85
S+ G GLRQYYL I +LQL V K+ NL RL+AQRNELN++VR+L+EELQLLQE GSYV
Sbjct: 9 SRGGTGLRQYYLSKIEDLQLVVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYV 68
Query: 86 GEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDP 145
GEVV+ M K KVLVKVHPEGK+VV P+ RVALRNDSY LH ILP+KVDP
Sbjct: 69 GEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDP 128
Query: 146 LVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPG 205
LV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHPE FE+LGIAQPKGVLLYGPPG
Sbjct: 129 LVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPG 188
Query: 206 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDS 265
TGKTLLARAVAHHTDCTFIRVSGSELVQK+IGEG+RMVRELFVMAREHAPSIIFMDEIDS
Sbjct: 189 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDS 248
Query: 266 IGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRID 325
IGS R+E GSG GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRIDILD ALLRPGRID
Sbjct: 249 IGS-RLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRID 306
Query: 326 RKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALR 385
RKIEFP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+ALR
Sbjct: 307 RKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 366
Query: 386 ERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
ERR+HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct: 367 ERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 400
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 1587 (563.7 bits), Expect = 5.0e-163, P = 5.0e-163
Identities = 310/396 (78%), Positives = 349/396 (88%)
Query: 24 GASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGS 83
G + EG YY Q I ELQ V ++ NL RL+AQRNELN +VR+L+EELQLLQE GS
Sbjct: 6 GIPEGSEGFHSYYTQKISELQFTVNERQKNLLRLQAQRNELNLKVRLLREELQLLQEQGS 65
Query: 84 YVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKV 143
Y+ EVVK M KNKVLVKVHPEGKYVV PS+RVALRN+SY LH ILP+KV
Sbjct: 66 YIAEVVKPMDKNKVLVKVHPEGKYVVDVDKTINIKDVTPSSRVALRNESYTLHKILPNKV 125
Query: 144 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGP 203
DPLV+LM VEKVPDSTY+M+GGLD+QI+EIKEVIELP+KHPELF++LGI QPKGVLLYGP
Sbjct: 126 DPLVSLMLVEKVPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGP 185
Query: 204 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEI 263
PGTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAREHAPSIIFMDEI
Sbjct: 186 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEI 245
Query: 264 DSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGR 323
DSIGSAR+E+G+G DSEVQRTMLELLNQLDGFEA+ IKV+MATNRID+LDQALLRPGR
Sbjct: 246 DSIGSARLETGTG--DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGR 303
Query: 324 IDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFA 383
IDRKIEFP PNEE+RLDILKIHSR+MNL RGI+L+KIAE+M GASGAE+K VCTEAGM+A
Sbjct: 304 IDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAEEMPGASGAEVKGVCTEAGMYA 363
Query: 384 LRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
LRERR+HVTQEDFEMAV+KVM K++EKNMS+RK WK
Sbjct: 364 LRERRVHVTQEDFEMAVSKVMMKDSEKNMSIRKFWK 399
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 1564 (555.6 bits), Expect = 1.4e-160, P = 1.4e-160
Identities = 307/393 (78%), Positives = 341/393 (86%)
Query: 27 KQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVG 86
+ E + QYY Q I + +L + QKT NL RLEAQRN LN+RVR+L+EE+QLLQEPGSYVG
Sbjct: 11 QSNENIVQYYTQKIQDAELAILQKTQNLRRLEAQRNGLNARVRLLREEIQLLQEPGSYVG 70
Query: 87 EVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPL 146
EV+K MGKNKVLVKVHPEGKYVV P+ RVALRNDSY L ILP+KVDPL
Sbjct: 71 EVIKTMGKNKVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVDPL 130
Query: 147 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 206
V+LM VEK+PDSTY+M+GGL++QIKEIKEVIELP+KHPELFESLGI QPKG+LLYGPPGT
Sbjct: 131 VSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGT 190
Query: 207 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI 266
GKTLLARAVAHHTDC FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI
Sbjct: 191 GKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI 250
Query: 267 GSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDR 326
GS+R +S G+GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRIDILD ALLRPGRIDR
Sbjct: 251 GSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDR 310
Query: 327 KIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
KIEFP P+ E+R +IL+IHSR MNL RGIDLK IAEKMNGASGAELK VCTEAGMFALRE
Sbjct: 311 KIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRE 370
Query: 387 RRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
RR+HVTQEDFE+AVAKV+ K MSL+KL+K
Sbjct: 371 RRVHVTQEDFELAVAKVLNKGDSGEMSLQKLFK 403
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 1544 (548.6 bits), Expect = 1.8e-158, P = 1.8e-158
Identities = 302/389 (77%), Positives = 340/389 (87%)
Query: 31 GLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVK 90
G+++YY I E + + +K N RLEAQRNELN+RVR L +E+Q L E SYVGE+VK
Sbjct: 49 GIKRYYELKIEEYESIINKKLQNKKRLEAQRNELNARVRELCDEIQYLLEAASYVGEIVK 108
Query: 91 VMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLM 150
MGKNKVLVK++PEGKYVV P+TRVAL NDSY LH ILPSKVDPLV+LM
Sbjct: 109 PMGKNKVLVKINPEGKYVVDIARHINISHCTPNTRVALYNDSYKLHKILPSKVDPLVSLM 168
Query: 151 KVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTL 210
KVEKVPDSTY+M+GGLDQQ+KE+KEVIELP+KHPE+FESLGI+QPKGVLLYGPPGTGKTL
Sbjct: 169 KVEKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTL 228
Query: 211 LARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSAR 270
LARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS R
Sbjct: 229 LARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQR 288
Query: 271 MESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEF 330
+E G +GDSEVQRTM+ELLNQLDGFE++ IKV+M TNRIDILD+ALLRPGRIDRKIEF
Sbjct: 289 IE-GE-HGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEF 346
Query: 331 PNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIH 390
PNPN E+R++ILKIHSR+MNLMRGID+ KIA MN SGAE+KAVCTEAGMFALRERR+H
Sbjct: 347 PNPNVEARMEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALRERRVH 406
Query: 391 VTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
VTQEDFEMAVAKVMK++ EKN +LRKLWK
Sbjct: 407 VTQEDFEMAVAKVMKQDAEKNFTLRKLWK 435
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 1544 (548.6 bits), Expect = 1.8e-158, P = 1.8e-158
Identities = 302/389 (77%), Positives = 340/389 (87%)
Query: 31 GLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVK 90
G+++YY I E + + +K N RLEAQRNELN+RVR L +E+Q L E SYVGE+VK
Sbjct: 49 GIKRYYELKIEEYESIINKKLQNKKRLEAQRNELNARVRELCDEIQYLLEAASYVGEIVK 108
Query: 91 VMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLM 150
MGKNKVLVK++PEGKYVV P+TRVAL NDSY LH ILPSKVDPLV+LM
Sbjct: 109 PMGKNKVLVKINPEGKYVVDIARHINISHCTPNTRVALYNDSYKLHKILPSKVDPLVSLM 168
Query: 151 KVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTL 210
KVEKVPDSTY+M+GGLDQQ+KE+KEVIELP+KHPE+FESLGI+QPKGVLLYGPPGTGKTL
Sbjct: 169 KVEKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTL 228
Query: 211 LARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSAR 270
LARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS R
Sbjct: 229 LARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQR 288
Query: 271 MESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEF 330
+E G +GDSEVQRTM+ELLNQLDGFE++ IKV+M TNRIDILD+ALLRPGRIDRKIEF
Sbjct: 289 IE-GE-HGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEF 346
Query: 331 PNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIH 390
PNPN E+R++ILKIHSR+MNLMRGID+ KIA MN SGAE+KAVCTEAGMFALRERR+H
Sbjct: 347 PNPNVEARMEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALRERRVH 406
Query: 391 VTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
VTQEDFEMAVAKVMK++ EKN +LRKLWK
Sbjct: 407 VTQEDFEMAVAKVMKQDAEKNFTLRKLWK 435
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 1538 (546.5 bits), Expect = 7.7e-158, P = 7.7e-158
Identities = 305/408 (74%), Positives = 349/408 (85%)
Query: 13 SAAPEEVCAAKGASKQGEG-LRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRML 71
SA P + A K + E LR+Y+ + + Q +V K+ N+ RL+AQRNELN++VRML
Sbjct: 10 SADPSKPTAQKLTEESDEKTLRKYFSTKVDDAQQKVADKSQNVRRLQAQRNELNTKVRML 69
Query: 72 KEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRND 131
KEELQ L E GSYVGEV K M K KVLVKVHPEGKYVV RVALR D
Sbjct: 70 KEELQQLHEQGSYVGEVSKAMDKKKVLVKVHPEGKYVVDVDKSIDINSLNTGARVALRAD 129
Query: 132 SYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLG 191
SY LH +LP+KVDPLV+LM VEKVPDSTY+M+GGLD+QIKEIKEVIELP+KHPELF++LG
Sbjct: 130 SYALHKLLPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALG 189
Query: 192 IAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 251
IAQPKGVLL+GPPGTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEG+RMVRELFVMAR
Sbjct: 190 IAQPKGVLLFGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAR 249
Query: 252 EHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRI 311
EHAPSIIFMDEIDSIGS+R+E SG GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRI
Sbjct: 250 EHAPSIIFMDEIDSIGSSRVEGSSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRI 308
Query: 312 DILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAE 371
DILD ALLRPGRIDRKIEFP P+E++R DILKIHSR+MNLMRGI++ KIAE++ GASGAE
Sbjct: 309 DILDPALLRPGRIDRKIEFPAPDEKARADILKIHSRKMNLMRGINMAKIAEQIPGASGAE 368
Query: 372 LKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
+K+VCTEAGMFALRERRIHVTQEDFEMAV KVM+K++EKNMS++KLWK
Sbjct: 369 VKSVCTEAGMFALRERRIHVTQEDFEMAVGKVMQKDSEKNMSIKKLWK 416
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 1514 (538.0 bits), Expect = 2.7e-155, P = 2.7e-155
Identities = 296/389 (76%), Positives = 339/389 (87%)
Query: 31 GLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVK 90
G+R Y+ Q I + +++++Q T NL RLEAQRN+LN++VR LK+EL+LLQEPGSYVGEVVK
Sbjct: 14 GIRPYFEQQIQDTEIRIQQTTQNLRRLEAQRNKLNNKVRQLKDELKLLQEPGSYVGEVVK 73
Query: 91 VMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLM 150
VMG KVLVK+HPEGK++V PS RV L+ DS+ L+ ILP+KVDPLV+LM
Sbjct: 74 VMGLKKVLVKIHPEGKFIVNVTKDIDVKKLTPSIRVCLKPDSHDLYKILPTKVDPLVSLM 133
Query: 151 KVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTL 210
VEKVPDSTYDM+GGLD+QIKEIKEVIELP+KHPELFESLGIAQPKGV+LYGPPGTGKTL
Sbjct: 134 MVEKVPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 193
Query: 211 LARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSAR 270
LARAVAHHT+C FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS+R
Sbjct: 194 LARAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSR 253
Query: 271 MESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEF 330
+E SG GDSEVQRTMLELLNQLDGFE+S IK++MATNR+DILD ALLRPGRIDRKIEF
Sbjct: 254 VEGSSG-GDSEVQRTMLELLNQLDGFESSKDIKIIMATNRLDILDPALLRPGRIDRKIEF 312
Query: 331 PNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIH 390
P P +R DILKIHSR MNL RGI+L+KIAEKMNG SGA++K VCTEAGM+ALRERRIH
Sbjct: 313 PAPTVAARTDILKIHSRSMNLTRGINLRKIAEKMNGCSGADVKGVCTEAGMYALRERRIH 372
Query: 391 VTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
VTQEDFE+AVAKVM K + +SL+KL+K
Sbjct: 373 VTQEDFELAVAKVMSKNDDGAVSLQKLFK 401
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 1487 (528.5 bits), Expect = 2.0e-152, P = 2.0e-152
Identities = 288/389 (74%), Positives = 332/389 (85%)
Query: 31 GLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVK 90
G++ Y+ Q I E +L++R KT N+ RLEAQRN LN +VR +K+EL+LLQEPGSYVGEV+K
Sbjct: 18 GIKPYFEQKIQETELKIRSKTENVRRLEAQRNALNDKVRFIKDELRLLQEPGSYVGEVIK 77
Query: 91 VMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLM 150
++ KVLVKV PEGKY+V S RV LR+DSY+LH +L +K DPLV+LM
Sbjct: 78 IVSDKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLM 137
Query: 151 KVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTL 210
VEKVPDSTYDM+GGL +QIKEIKEVIELP+KHPELFESLGIAQPKGV+LYGPPGTGKTL
Sbjct: 138 MVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 197
Query: 211 LARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSAR 270
LARAVAHHTDC FIRVSG+ELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS R
Sbjct: 198 LARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTR 257
Query: 271 MESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEF 330
+E GSG GDSEVQRTMLELLNQLDGFE S IK++MATNR+DILD ALLRPGRIDRKIEF
Sbjct: 258 VE-GSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEF 316
Query: 331 PNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIH 390
P P+ +R +IL+IHSR+MNL RGI+L+K+AEKMNG SGA++K VCTEAGM+ALRERRIH
Sbjct: 317 PPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIH 376
Query: 391 VTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
VTQEDFE+AV KVM K E +S+ KL+K
Sbjct: 377 VTQEDFELAVGKVMNKNQETAISVAKLFK 405
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 1485 (527.8 bits), Expect = 3.2e-152, P = 3.2e-152
Identities = 294/409 (71%), Positives = 340/409 (83%)
Query: 11 PESAAPEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRM 70
P S P A A+ + LR Y+ + + + V +K+ N+ RL AQ+ ELN +VR+
Sbjct: 29 PNSRKP----ATLDANSDEQTLRPYFKTKVEQAEQTVAEKSINVRRLMAQQKELNGKVRL 84
Query: 71 LKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRN 130
LKEE+ L E GS+VGEV K M K KVLVK HP+GKY+V TRVALR
Sbjct: 85 LKEEISHLHEQGSHVGEVCKAMDKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVALRA 144
Query: 131 DSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESL 190
D+Y +H +LPSKVDPLV+LM VEKVPDSTY+M+GGLD QIKEIKEVIELP+KHPELF++L
Sbjct: 145 DNYAIHEVLPSKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDAL 204
Query: 191 GIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMA 250
GIAQPKGVLLYGPPGTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEG+RMVRELFVMA
Sbjct: 205 GIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMA 264
Query: 251 REHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNR 310
REHAPSIIFMDEIDSIGS+R+E GS GDSEVQRTMLELLNQLDGFEA+ IKV+MATNR
Sbjct: 265 REHAPSIIFMDEIDSIGSSRVE-GSRGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNR 323
Query: 311 IDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGA 370
IDILD ALLRPGRIDRKIEFP P+E++R ILKIHSR+MNLMRGI + KIAE++ GASGA
Sbjct: 324 IDILDSALLRPGRIDRKIEFPAPDEKARAQILKIHSRKMNLMRGIRMDKIAEQIPGASGA 383
Query: 371 ELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
E+K+VCTEAGMFALRERRIHVTQEDFEMAV KVM+K++EKNMS++KLWK
Sbjct: 384 EVKSVCTEAGMFALRERRIHVTQEDFEMAVGKVMQKDSEKNMSIKKLWK 432
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 1464 (520.4 bits), Expect = 5.4e-150, P = 5.4e-150
Identities = 292/388 (75%), Positives = 328/388 (84%)
Query: 32 LRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKV 91
L YY I ++L++ Q L RLEAQRN+ NSRVR+L+EEL LLQ+PGSYVGEVVKV
Sbjct: 3 LDNYYRNKIESMKLEIIQGQAVLRRLEAQRNDYNSRVRLLREELGLLQQPGSYVGEVVKV 62
Query: 92 MGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMK 151
M KVLVKVHPEGKYVV RVAL +DSY L +LPS VDPLV+LM
Sbjct: 63 MSTKKVLVKVHPEGKYVVDIADGVDIGKLTVGKRVALLSDSYKLEKMLPSSVDPLVSLMM 122
Query: 152 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLL 211
VEKVPDSTYDMIGGLDQQIKEIKEVIEL +KHPELFESLGIAQPKGVLLYGPPGTGKTLL
Sbjct: 123 VEKVPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLL 182
Query: 212 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARM 271
ARAVAHHTDC FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS+R+
Sbjct: 183 ARAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRI 242
Query: 272 ESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFP 331
+S +G+GDSEVQRTMLELLNQLDGFE + IK++MATNR+DILD ALLRPGRIDRKIEFP
Sbjct: 243 DS-AGSGDSEVQRTMLELLNQLDGFEPTKNIKIIMATNRLDILDPALLRPGRIDRKIEFP 301
Query: 332 NPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHV 391
P+ E+R DIL+IHSR MNL RGI+L KIAEKMNG SGAELK VCTEAGM+ALRERR+HV
Sbjct: 302 PPSVEARADILRIHSRSMNLTRGINLTKIAEKMNGCSGAELKGVCTEAGMYALRERRVHV 361
Query: 392 TQEDFEMAVAKVMKKETEKNMSLRKLWK 419
TQEDF++A AK++ K +K +++ KL+K
Sbjct: 362 TQEDFDLATAKILNKHDDKEVAVSKLFK 389
>UNIPROTKB|J3QSA9 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031595 "nuclear proteasome complex"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
EMBL:AC015651 ChiTaRS:PSMC5 HGNC:HGNC:9552 Ensembl:ENST00000585123
Uniprot:J3QSA9
Length = 257
Score = 1020 (364.1 bits), Expect = 6.0e-103, P = 6.0e-103
Identities = 200/250 (80%), Positives = 219/250 (87%)
Query: 27 KQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVG 86
K G GLRQYYL I ELQL V K+ NL RL+AQRNELN++VR+L+EELQLLQE GSYVG
Sbjct: 7 KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVG 66
Query: 87 EVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPL 146
EVV+ M K KVLVKVHPEGK+VV P+ RVALRNDSY LH ILP+KVDPL
Sbjct: 67 EVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPL 126
Query: 147 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 206
V+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHPELFE+LGIAQPKGVLLYGPPGT
Sbjct: 127 VSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGT 186
Query: 207 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI 266
GKTLLARAVAHHTDCTFIRVSGSELVQK+IGEG+RMVRELFVMAREHAPSIIFMDEIDSI
Sbjct: 187 GKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSI 246
Query: 267 GSARMESGSG 276
GS+R+E GSG
Sbjct: 247 GSSRLEGGSG 256
>UNIPROTKB|E2RM61 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074947
EMBL:AAEX03006359 ProteinModelPortal:E2RM61 PRIDE:E2RM61
Ensembl:ENSCAFT00000020231 OMA:DSNCELQ NextBio:20855489
Uniprot:E2RM61
Length = 251
Score = 996 (355.7 bits), Expect = 2.1e-100, P = 2.1e-100
Identities = 197/238 (82%), Positives = 214/238 (89%)
Query: 68 VRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVA 127
VR+L+EELQLLQE GSYVGEVV+ M K KVLVKVHPEGK+VV P+ RVA
Sbjct: 7 VRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVA 66
Query: 128 LRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELF 187
LRNDSY LH ILP+KVDPLV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHPELF
Sbjct: 67 LRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELF 126
Query: 188 ESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELF 247
E+LGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK+IGEG+RMVRELF
Sbjct: 127 EALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELF 186
Query: 248 VMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVL 305
VMAREHAPSIIFMDEIDSIGS+R+E GSG GDSEVQRTMLELLNQLDGFEA+ IKV+
Sbjct: 187 VMAREHAPSIIFMDEIDSIGSSRLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIKVM 243
>UNIPROTKB|J3KRP2 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031595 "nuclear proteasome complex"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003959 Pfam:PF00004
GO:GO:0005524 EMBL:AC015651 ChiTaRS:PSMC5 HGNC:HGNC:9552
Ensembl:ENST00000584320 Uniprot:J3KRP2
Length = 241
Score = 958 (342.3 bits), Expect = 2.2e-96, P = 2.2e-96
Identities = 188/235 (80%), Positives = 205/235 (87%)
Query: 27 KQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVG 86
K G GLRQYYL I ELQL V K+ NL RL+AQRNELN++VR+L+EELQLLQE GSYVG
Sbjct: 7 KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVG 66
Query: 87 EVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPL 146
EVV+ M K KVLVKVHPEGK+VV P+ RVALRNDSY LH ILP+KVDPL
Sbjct: 67 EVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPL 126
Query: 147 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 206
V+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHPELFE+LGIAQPKGVLLYGPPGT
Sbjct: 127 VSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGT 186
Query: 207 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMD 261
GKTLLARAVAHHTDCTFIRVSGSELVQK+IGEG+RMVRELFVMAREHAPSIIFMD
Sbjct: 187 GKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMD 241
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 897 (320.8 bits), Expect = 6.5e-90, P = 6.5e-90
Identities = 188/414 (45%), Positives = 275/414 (66%)
Query: 4 VGIETKQPESAAPEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNE 63
+ E K+ + A EE K + L+ L+ + + ++ + + +LE ++ E
Sbjct: 7 ISTELKKEKKAFTEEFKEEKEIN-DNSNLKNDLLKEELQEKARIAELESRILKLELEKKE 65
Query: 64 LN-SRVRMLKE------ELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXX 116
L ++++KE EL ++ P VG VV +G+ KV+VK ++V
Sbjct: 66 LERENLQLMKENEILRRELDRMRVPPLIVGTVVDKVGERKVVVKSSTGPSFLVNVSHFVN 125
Query: 117 XXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEV 176
P RV L + + +LP D M+V++ P+ Y+ IGGL++Q++EI+EV
Sbjct: 126 PDDLAPGKRVCLNQQTLTVVDVLPENKDYRAKAMEVDERPNVRYEDIGGLEKQMQEIREV 185
Query: 177 IELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYI 236
+ELP+KHPELFE +GI PKG+LLYGPPGTGKTLLA+AVA T+ TFIRV GSELV+K+I
Sbjct: 186 VELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFI 245
Query: 237 GEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGF 296
GEG+ +V+++F +A+E APSIIF+DEID+I + R ++ +G GD EVQRT+++LL ++DGF
Sbjct: 246 GEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTG-GDREVQRTLMQLLAEMDGF 304
Query: 297 EASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGID 356
+A +K++ ATNR DILD A+LRPGR DR IE P P+E+ RL+ILKIH+R+MNL ++
Sbjct: 305 DARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVN 364
Query: 357 LKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEK 410
L++IA+ G GAELKA+CTEAGM A+RE R +VT +DF AV K+M+K+ K
Sbjct: 365 LEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIMEKKKVK 418
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 887 (317.3 bits), Expect = 7.5e-89, P = 7.5e-89
Identities = 180/378 (47%), Positives = 253/378 (66%)
Query: 32 LRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKV 91
L+ L+ I + + + N RL+ Q +E N R ++L+ P S VG + ++
Sbjct: 59 LKLLKLERIKDYLMMEDEFIRNQERLKPQ-DEKNEEERSKVDDLR--GTPMS-VGNLEEI 114
Query: 92 MGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMK 151
+ N +V ++ V P V L + + + +L DP+V +MK
Sbjct: 115 IDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMK 174
Query: 152 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLL 211
+EK P TY IGGLD QI+EIKE +ELP+ HPE +E +GI PKGV+LYGPPGTGKTLL
Sbjct: 175 LEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 234
Query: 212 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARM 271
A+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A EHAPSI+F+DEID++G+ R
Sbjct: 235 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRY 294
Query: 272 ESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFP 331
+S SG G+ E+QRTMLELLNQLDGF++ +KV+MATNRI+ LD AL+RPGRIDRKIEFP
Sbjct: 295 DSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFP 353
Query: 332 NPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHV 391
P+E+++ I IH+ RM L ++L ++ + SGA++KA+CTEAG+ ALRERR+ V
Sbjct: 354 LPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRERRMKV 413
Query: 392 TQEDFEMAVAKVMKKETE 409
T EDF+ + V+ ++ E
Sbjct: 414 TNEDFKKSKESVLYRKKE 431
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 882 (315.5 bits), Expect = 2.5e-88, P = 2.5e-88
Identities = 191/409 (46%), Positives = 265/409 (64%)
Query: 7 ETKQPESAA------PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQ 60
+TK P++A+ P C K E ++ Y L ++ Q + K LE +
Sbjct: 38 KTKGPDAASKLPLVTPHTQCRLKLLKL--ERIKDYLLMEEEFIRNQEQMKP-----LEEK 90
Query: 61 RNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXX 120
+ E S+V ++L+ P S VG + +++ N +V ++ V
Sbjct: 91 QEEERSKV----DDLR--GTPMS-VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLL 143
Query: 121 XPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 180
P V L + + + +L DPLV +MKVEK P TY IGGLD QI+EIKE +ELP
Sbjct: 144 EPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELP 203
Query: 181 IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS 240
+ HPE +E +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G
Sbjct: 204 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 263
Query: 241 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASN 300
++VRELF +A EHAPSI+F+DEID+IG+ R +S SG G+ E+QRTMLELLNQLDGF++
Sbjct: 264 KLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRG 322
Query: 301 KIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKI 360
+KV+MATNRI+ LD AL+RPGRIDRKIEFP P+E+++ I +IH+ RM L + L ++
Sbjct: 323 DVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDEL 382
Query: 361 AEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 409
+ SGA++KA+CTEAG+ ALRERR+ VT EDF+ + V+ K+ E
Sbjct: 383 IMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQE 431
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 882 (315.5 bits), Expect = 2.5e-88, P = 2.5e-88
Identities = 191/409 (46%), Positives = 265/409 (64%)
Query: 7 ETKQPESAA------PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQ 60
+TK P++A+ P C K E ++ Y L ++ Q + K LE +
Sbjct: 37 KTKGPDAASKLPLVTPHTQCRLKLLKL--ERIKDYLLMEEEFIRNQEQMKP-----LEEK 89
Query: 61 RNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXX 120
+ E S+V ++L+ P S VG + +++ N +V ++ V
Sbjct: 90 QEEERSKV----DDLR--GTPMS-VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLL 142
Query: 121 XPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 180
P V L + + + +L DPLV +MKVEK P TY IGGLD QI+EIKE +ELP
Sbjct: 143 EPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELP 202
Query: 181 IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS 240
+ HPE +E +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G
Sbjct: 203 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 262
Query: 241 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASN 300
++VRELF +A EHAPSI+F+DEID+IG+ R +S SG G+ E+QRTMLELLNQLDGF++
Sbjct: 263 KLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRG 321
Query: 301 KIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKI 360
+KV+MATNRI+ LD AL+RPGRIDRKIEFP P+E+++ I +IH+ RM L + L ++
Sbjct: 322 DVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDEL 381
Query: 361 AEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 409
+ SGA++KA+CTEAG+ ALRERR+ VT EDF+ + V+ K+ E
Sbjct: 382 IMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQE 430
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 880 (314.8 bits), Expect = 4.1e-88, P = 4.1e-88
Identities = 191/409 (46%), Positives = 264/409 (64%)
Query: 7 ETKQPESAA------PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQ 60
+TK P++A+ P C K E ++ Y L ++ Q + K LE +
Sbjct: 39 KTKGPDAASKLPLVTPHTQCRLKLLKL--ERIKDYLLMEEEFIRNQEQMKP-----LEEK 91
Query: 61 RNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXX 120
+ E S+V ++L+ P S VG + +++ N +V ++ V
Sbjct: 92 QEEERSKV----DDLR--GTPMS-VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLL 144
Query: 121 XPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 180
P V L + + + +L DPLV +MKVEK P TY IGGLD QI+EIKE +ELP
Sbjct: 145 EPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELP 204
Query: 181 IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS 240
+ HPE +E +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 264
Query: 241 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASN 300
++VRELF +A EHAPSI+F+DEID+IG+ R +S SG G+ E+QRTMLELLNQLDGF++
Sbjct: 265 KLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRG 323
Query: 301 KIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKI 360
+KV+MATNRI+ LD AL+RPGRIDRKIEFP P+E+++ I +IH+ RM L + L +
Sbjct: 324 DVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDL 383
Query: 361 AEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 409
+ SGA++KA+CTEAG+ ALRERR+ VT EDF+ + V+ K+ E
Sbjct: 384 IMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQE 432
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 880 (314.8 bits), Expect = 4.1e-88, P = 4.1e-88
Identities = 191/409 (46%), Positives = 264/409 (64%)
Query: 7 ETKQPESAA------PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQ 60
+TK P++A+ P C K E ++ Y L ++ Q + K LE +
Sbjct: 39 KTKGPDAASKLPLVTPHTQCRLKLLKL--ERIKDYLLMEEEFIRNQEQMKP-----LEEK 91
Query: 61 RNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXX 120
+ E S+V ++L+ P S VG + +++ N +V ++ V
Sbjct: 92 QEEERSKV----DDLR--GTPMS-VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLL 144
Query: 121 XPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 180
P V L + + + +L DPLV +MKVEK P TY IGGLD QI+EIKE +ELP
Sbjct: 145 EPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELP 204
Query: 181 IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS 240
+ HPE +E +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 264
Query: 241 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASN 300
++VRELF +A EHAPSI+F+DEID+IG+ R +S SG G+ E+QRTMLELLNQLDGF++
Sbjct: 265 KLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRG 323
Query: 301 KIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKI 360
+KV+MATNRI+ LD AL+RPGRIDRKIEFP P+E+++ I +IH+ RM L + L +
Sbjct: 324 DVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDL 383
Query: 361 AEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 409
+ SGA++KA+CTEAG+ ALRERR+ VT EDF+ + V+ K+ E
Sbjct: 384 IMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQE 432
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 880 (314.8 bits), Expect = 4.1e-88, P = 4.1e-88
Identities = 191/409 (46%), Positives = 264/409 (64%)
Query: 7 ETKQPESAA------PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQ 60
+TK P++A+ P C K E ++ Y L ++ Q + K LE +
Sbjct: 39 KTKGPDAASKLPLVTPHTQCRLKLLKL--ERIKDYLLMEEEFIRNQEQMKP-----LEEK 91
Query: 61 RNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXX 120
+ E S+V ++L+ P S VG + +++ N +V ++ V
Sbjct: 92 QEEERSKV----DDLR--GTPMS-VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLL 144
Query: 121 XPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 180
P V L + + + +L DPLV +MKVEK P TY IGGLD QI+EIKE +ELP
Sbjct: 145 EPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELP 204
Query: 181 IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS 240
+ HPE +E +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 264
Query: 241 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASN 300
++VRELF +A EHAPSI+F+DEID+IG+ R +S SG G+ E+QRTMLELLNQLDGF++
Sbjct: 265 KLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRG 323
Query: 301 KIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKI 360
+KV+MATNRI+ LD AL+RPGRIDRKIEFP P+E+++ I +IH+ RM L + L +
Sbjct: 324 DVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDL 383
Query: 361 AEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 409
+ SGA++KA+CTEAG+ ALRERR+ VT EDF+ + V+ K+ E
Sbjct: 384 IMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQE 432
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 880 (314.8 bits), Expect = 4.1e-88, P = 4.1e-88
Identities = 191/409 (46%), Positives = 264/409 (64%)
Query: 7 ETKQPESAA------PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQ 60
+TK P++A+ P C K E ++ Y L ++ Q + K LE +
Sbjct: 39 KTKGPDAASKLPLVTPHTQCRLKLLKL--ERIKDYLLMEEEFIRNQEQMKP-----LEEK 91
Query: 61 RNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXX 120
+ E S+V ++L+ P S VG + +++ N +V ++ V
Sbjct: 92 QEEERSKV----DDLR--GTPMS-VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLL 144
Query: 121 XPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 180
P V L + + + +L DPLV +MKVEK P TY IGGLD QI+EIKE +ELP
Sbjct: 145 EPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELP 204
Query: 181 IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS 240
+ HPE +E +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 264
Query: 241 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASN 300
++VRELF +A EHAPSI+F+DEID+IG+ R +S SG G+ E+QRTMLELLNQLDGF++
Sbjct: 265 KLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRG 323
Query: 301 KIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKI 360
+KV+MATNRI+ LD AL+RPGRIDRKIEFP P+E+++ I +IH+ RM L + L +
Sbjct: 324 DVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDL 383
Query: 361 AEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 409
+ SGA++KA+CTEAG+ ALRERR+ VT EDF+ + V+ K+ E
Sbjct: 384 IMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQE 432
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 880 (314.8 bits), Expect = 4.1e-88, P = 4.1e-88
Identities = 191/409 (46%), Positives = 264/409 (64%)
Query: 7 ETKQPESAA------PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQ 60
+TK P++A+ P C K E ++ Y L ++ Q + K LE +
Sbjct: 39 KTKGPDAASKLPLVTPHTQCRLKLLKL--ERIKDYLLMEEEFIRNQEQMKP-----LEEK 91
Query: 61 RNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXX 120
+ E S+V ++L+ P S VG + +++ N +V ++ V
Sbjct: 92 QEEERSKV----DDLR--GTPMS-VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLL 144
Query: 121 XPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 180
P V L + + + +L DPLV +MKVEK P TY IGGLD QI+EIKE +ELP
Sbjct: 145 EPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELP 204
Query: 181 IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS 240
+ HPE +E +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 264
Query: 241 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASN 300
++VRELF +A EHAPSI+F+DEID+IG+ R +S SG G+ E+QRTMLELLNQLDGF++
Sbjct: 265 KLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRG 323
Query: 301 KIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKI 360
+KV+MATNRI+ LD AL+RPGRIDRKIEFP P+E+++ I +IH+ RM L + L +
Sbjct: 324 DVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDL 383
Query: 361 AEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 409
+ SGA++KA+CTEAG+ ALRERR+ VT EDF+ + V+ K+ E
Sbjct: 384 IMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQE 432
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 880 (314.8 bits), Expect = 4.1e-88, P = 4.1e-88
Identities = 191/409 (46%), Positives = 264/409 (64%)
Query: 7 ETKQPESAA------PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQ 60
+TK P++A+ P C K E ++ Y L ++ Q + K LE +
Sbjct: 39 KTKGPDAASKLPLVTPHTQCRLKLLKL--ERIKDYLLMEEEFIRNQEQMKP-----LEEK 91
Query: 61 RNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXX 120
+ E S+V ++L+ P S VG + +++ N +V ++ V
Sbjct: 92 QEEERSKV----DDLR--GTPMS-VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLL 144
Query: 121 XPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 180
P V L + + + +L DPLV +MKVEK P TY IGGLD QI+EIKE +ELP
Sbjct: 145 EPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELP 204
Query: 181 IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS 240
+ HPE +E +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 264
Query: 241 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASN 300
++VRELF +A EHAPSI+F+DEID+IG+ R +S SG G+ E+QRTMLELLNQLDGF++
Sbjct: 265 KLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRG 323
Query: 301 KIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKI 360
+KV+MATNRI+ LD AL+RPGRIDRKIEFP P+E+++ I +IH+ RM L + L +
Sbjct: 324 DVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDL 383
Query: 361 AEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 409
+ SGA++KA+CTEAG+ ALRERR+ VT EDF+ + V+ K+ E
Sbjct: 384 IMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQE 432
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
Identities = 185/384 (48%), Positives = 247/384 (64%)
Query: 33 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVM 92
R+ LQ + L+ ++ L L Q EL + + +L+ LQ G VGEV+K +
Sbjct: 5 REKGLQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQL 64
Query: 93 GKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKV 152
+ K +VK +YVV P TRVAL + + LP +VDPLV M
Sbjct: 65 TEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSH 124
Query: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
E +Y IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLA
Sbjct: 125 EDPGSVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 184
Query: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
RAVA DC F++V S +V KYIGE +R++RE+F AR+H P IIFMDEID+IG R
Sbjct: 185 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS 244
Query: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
G+ + D E+QRT++ELLNQ+DGF+ +++K++MATNR D LD ALLRPGR+DRKI
Sbjct: 245 EGT-SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIEL 303
Query: 333 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVT 392
PNE++RLDILKIHS + ID + I + +G +GA+L+ VCTEAGMFA+R +VT
Sbjct: 304 PNEQARLDILKIHSGPITKHGDIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHEYVT 363
Query: 393 QEDFEMAVAKVM-KKETEKNMSLR 415
QEDF AV KV K+ E + +
Sbjct: 364 QEDFMKAVRKVADSKKLESKLDYK 387
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 876 (313.4 bits), Expect = 1.1e-87, P = 1.1e-87
Identities = 186/400 (46%), Positives = 258/400 (64%)
Query: 10 QPESAAPEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVR 69
+P P C K E ++ Y L ++ Q + K LE ++ E S+V
Sbjct: 48 KPPLVTPHTQCRLKLLKL--ERIKDYLLMEEEFIRNQEQMKP-----LEEKQEEERSKV- 99
Query: 70 MLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALR 129
++L+ P S VG + +++ N +V ++ V P V L
Sbjct: 100 ---DDLR--GTPMS-VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLN 153
Query: 130 NDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFES 189
+ + + +L DPLV +MK+EK P TY IGGLD QI+EIKE +ELP+ HPE +E
Sbjct: 154 HKVHAVIGVLMDDTDPLVTVMKLEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEE 213
Query: 190 LGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVM 249
+GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +
Sbjct: 214 MGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRV 273
Query: 250 AREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATN 309
A EH PSI+F+DEID+IG+ R +S SG G+ E+QRTMLELLNQLDGF++ +KV+MATN
Sbjct: 274 AEEHGPSIVFIDEIDAIGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATN 332
Query: 310 RIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASG 369
RI+ LD AL+RPGRIDRKIEFP P+E+++ I +IH+ RM L + L ++ + SG
Sbjct: 333 RIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSG 392
Query: 370 AELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 409
A++KA+CTEAG+ ALRERR+ VT EDF+ + + K+TE
Sbjct: 393 ADIKAICTEAGLMALRERRMKVTNEDFKKSKENFLYKKTE 432
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 876 (313.4 bits), Expect = 1.1e-87, P = 1.1e-87
Identities = 175/354 (49%), Positives = 239/354 (67%)
Query: 56 RLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXX 115
R + Q L + + ++ L+ VG + +++ N +V ++ V
Sbjct: 7 RNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFV 66
Query: 116 XXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKE 175
P V L + + + +L DPLV +MKVEK P TY IGGLD QI+EIKE
Sbjct: 67 DKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKE 126
Query: 176 VIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKY 235
+ELP+ HPE +E +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSEL+QKY
Sbjct: 127 SVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKY 186
Query: 236 IGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDG 295
+G+G ++VRELF +A EHAPSI+F+DEID+IG+ R +S SG G+ E+QRTMLELLNQLDG
Sbjct: 187 LGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG-GEREIQRTMLELLNQLDG 245
Query: 296 FEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGI 355
F++ +KV+MATNRI+ LD AL+RPGRIDRKIEFP P+E+++ I +IH+ RM L +
Sbjct: 246 FDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDV 305
Query: 356 DLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 409
L + + SGA++KA+CTEAG+ ALRERR+ VT EDF+ + V+ K+ E
Sbjct: 306 TLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQE 359
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
Identities = 182/381 (47%), Positives = 262/381 (68%)
Query: 32 LRQYYLQHIHELQLQVRQ--KTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVV 89
L+Q L+ I + L ++ + ++LN+ + N + EEL+ +P + VG +
Sbjct: 56 LKQLKLERIKDYLLMEQEFLQNYDLNQPKVDENSKEQADEKIIEELR--GDPLT-VGNLE 112
Query: 90 KVMGKNKVLVK--VHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLV 147
+++ N +V V PE YV +T V L N + + ++ +VDP+V
Sbjct: 113 EIIDDNHAIVSSTVGPE-HYVRIMSFVDKSKLYLGAT-VLLNNKTLSVVGVIDGEVDPMV 170
Query: 148 NLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTG 207
N+MKVEK P +Y IGGL+ Q++E+KE IELP+ HPEL+E +GI PKGV+LYG PGTG
Sbjct: 171 NVMKVEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTG 230
Query: 208 KTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIG 267
KTLLA+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A E APSI+F+DEID++G
Sbjct: 231 KTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVG 290
Query: 268 SARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRK 327
+ R +S SG G+ E+QRTMLELLNQLDGF+A +KV+MATNRI+ LD AL+RPGRIDRK
Sbjct: 291 TKRYDSQSG-GEREIQRTMLELLNQLDGFDARTDVKVIMATNRIETLDPALIRPGRIDRK 349
Query: 328 IEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRER 387
IEFP P+ +++ I +IH+ +MNL ++L++ + SGA++KA+CTE+G+ ALRER
Sbjct: 350 IEFPLPDIKTKRKIFEIHTAKMNLSEDVNLEEFVMSKDDLSGADIKAICTESGLLALRER 409
Query: 388 RIHVTQEDFEMAVAKVMKKET 408
R+ VT DF+ A KV+ ++T
Sbjct: 410 RMRVTHTDFKKAKEKVLYRKT 430
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 872 (312.0 bits), Expect = 2.9e-87, P = 2.9e-87
Identities = 184/384 (47%), Positives = 245/384 (63%)
Query: 33 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVM 92
R LQ + L+ ++ L L Q EL + + +L+ LQ G VGEV+K +
Sbjct: 19 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQL 78
Query: 93 GKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKV 152
+ K +VK +YVV P TRVAL + + LP +VDPLV M
Sbjct: 79 TEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSH 138
Query: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
E D +Y IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLA
Sbjct: 139 EDPGDVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 198
Query: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
RAVA DC F++V S +V KYIGE +R++RE+F AR+H P IIFMDEID+IG R
Sbjct: 199 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS 258
Query: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
G+ + D E+QRT++ELLNQ+DGF+ +++K++MATNR D LD ALLRPGR+DRKI
Sbjct: 259 EGT-SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 317
Query: 333 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVT 392
PNE++RLDILKIH+ + ID + I + +G +GA+L+ VCTEAGMFA+R V
Sbjct: 318 PNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVV 377
Query: 393 QEDFEMAVAKVM-KKETEKNMSLR 415
QEDF AV KV K+ E + +
Sbjct: 378 QEDFMKAVRKVADSKKLESKLDYK 401
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 872 (312.0 bits), Expect = 2.9e-87, P = 2.9e-87
Identities = 184/384 (47%), Positives = 245/384 (63%)
Query: 33 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVM 92
R LQ + L+ ++ L L Q EL + + +L+ LQ G VGEV+K +
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQL 64
Query: 93 GKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKV 152
+ K +VK +YVV P TRVAL + + LP +VDPLV M
Sbjct: 65 TEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSH 124
Query: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
E D +Y IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLA
Sbjct: 125 EDPGDVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 184
Query: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
RAVA DC F++V S +V KYIGE +R++RE+F AR+H P IIFMDEID+IG R
Sbjct: 185 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS 244
Query: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
G+ + D E+QRT++ELLNQ+DGF+ +++K++MATNR D LD ALLRPGR+DRKI
Sbjct: 245 EGT-SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 303
Query: 333 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVT 392
PNE++RLDILKIH+ + ID + I + +G +GA+L+ VCTEAGMFA+R V
Sbjct: 304 PNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVV 363
Query: 393 QEDFEMAVAKVM-KKETEKNMSLR 415
QEDF AV KV K+ E + +
Sbjct: 364 QEDFMKAVRKVADSKKLESKLDYK 387
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 872 (312.0 bits), Expect = 2.9e-87, P = 2.9e-87
Identities = 176/372 (47%), Positives = 253/372 (68%)
Query: 38 QHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKV 97
+ I + L ++ N RL+ Q E R +EL+ P + VG + +++
Sbjct: 69 ERIKDYLLMEQEFIQNQERLKPQE-ERQEEERAKVDELR--GTPMA-VGSLEEIIDDQHA 124
Query: 98 LVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPD 157
+V + ++ V P V L + ++ + +L DP+V++MK+EK P
Sbjct: 125 IVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQ 184
Query: 158 STYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH 217
TY +GGLDQQI+EIKE +ELP+ HPE +E +GI PKGV+LYG PGTGKTLLA+AVA+
Sbjct: 185 ETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVAN 244
Query: 218 HTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGN 277
T TF+R+ GSEL+QKY+G+G +MVRELF +A E+APSI+F+DEID++G+ R +S SG
Sbjct: 245 QTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSG- 303
Query: 278 GDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEES 337
G+ E+QRTMLELLNQLDGF++ +KVLMATNRI+ LD AL+RPGRIDRKIEFP P+E++
Sbjct: 304 GEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKT 363
Query: 338 RLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFE 397
+ I +IH+ RM L + ++L++ + SGA++KA+CTEAG+ ALRERR+ VT EDF+
Sbjct: 364 KRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDFQ 423
Query: 398 MAVAKVMKKETE 409
+ V+ ++ E
Sbjct: 424 KSKENVLYRKKE 435
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 871 (311.7 bits), Expect = 3.7e-87, P = 3.7e-87
Identities = 189/409 (46%), Positives = 265/409 (64%)
Query: 7 ETKQPESAA------PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQ 60
++K P++A+ P C K KQ + ++ Y L ++ Q + K LE +
Sbjct: 39 KSKGPDAASKLPLVTPHTQCRLK-LLKQ-DRIKDYLLMEEEFIRNQEQMKP-----LEEK 91
Query: 61 RNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXX 120
+ E S+V ++L+ P S VG + +++ N +V ++ V
Sbjct: 92 QEEERSKV----DDLR--GTPMS-VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLL 144
Query: 121 XPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 180
P V L + + + +L DPLV +MKVEK P TY IGGLD QI+EIKE +ELP
Sbjct: 145 EPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELP 204
Query: 181 IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS 240
+ HPE +E +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G
Sbjct: 205 LTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 264
Query: 241 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASN 300
++VRELF +A EHAPSI+F+DEID+IG+ R +S SG G+ E+QRTMLELLNQLDGF++
Sbjct: 265 KLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRG 323
Query: 301 KIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKI 360
+KV+MATNRI+ LD AL+RPGRIDRKIEFP P+E+++ I +IH+ RM + + L +
Sbjct: 324 DVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTVAEDVSLDDL 383
Query: 361 AEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 409
+ SGA++KA+CTEAG+ ALRERR+ VT EDF+ + V+ K+ E
Sbjct: 384 ILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQE 432
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 869 (311.0 bits), Expect = 6.0e-87, P = 6.0e-87
Identities = 187/394 (47%), Positives = 257/394 (65%)
Query: 16 PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEEL 75
P C K KQ E ++ Y L ++ Q + K LE ++ E S+V ++L
Sbjct: 54 PHTQCRLK-LLKQ-ERIKDYLLMEEEFIRDQEQMKP-----LEEKQEEERSKV----DDL 102
Query: 76 QLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVL 135
+ P S VG + +++ N +V ++ V P V L + + +
Sbjct: 103 R--GTPMS-VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAV 159
Query: 136 HLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQP 195
+L DPLV +MKVEK P TY IGGLD QI+EIKE +ELP+ HPE +E +GI P
Sbjct: 160 IGVLMDDTDPLVTVMKVEKAPQETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPP 219
Query: 196 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAP 255
KGV+LYG PGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A EHAP
Sbjct: 220 KGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAP 279
Query: 256 SIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILD 315
SI+F+DEID+IG+ R +S SG G+ E+QRTMLELLNQLDGF++ +KV+MATNRI+ LD
Sbjct: 280 SIVFIDEIDAIGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLD 338
Query: 316 QALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAV 375
AL+RPGRIDRKIEFP P+E+++ I +IH+ RM + + L + + SGA++KA+
Sbjct: 339 PALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAI 398
Query: 376 CTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 409
CTEAG+ ALRERR+ VT EDF+ + V+ K+ E
Sbjct: 399 CTEAGLMALRERRMKVTNEDFKKSKENVLYKKQE 432
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 867 (310.3 bits), Expect = 9.9e-87, P = 9.9e-87
Identities = 183/384 (47%), Positives = 245/384 (63%)
Query: 33 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVM 92
R LQ + L+ ++ L L Q EL + + +L+ LQ G VGEV+K +
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQL 64
Query: 93 GKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKV 152
+ K +VK +YVV P TRVAL + + LP +VDPLV M
Sbjct: 65 TEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSH 124
Query: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
E + +Y IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLA
Sbjct: 125 EDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 184
Query: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
RAVA DC F++V S +V KYIGE +R++RE+F AR+H P IIFMDEID+IG R
Sbjct: 185 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS 244
Query: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
G+ + D E+QRT++ELLNQ+DGF+ +++K++MATNR D LD ALLRPGR+DRKI
Sbjct: 245 EGT-SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 303
Query: 333 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVT 392
PNE++RLDILKIH+ + ID + I + +G +GA+L+ VCTEAGMFA+R V
Sbjct: 304 PNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVV 363
Query: 393 QEDFEMAVAKVM-KKETEKNMSLR 415
QEDF AV KV K+ E + +
Sbjct: 364 QEDFMKAVRKVADSKKLESKLDYK 387
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 867 (310.3 bits), Expect = 9.9e-87, P = 9.9e-87
Identities = 183/384 (47%), Positives = 245/384 (63%)
Query: 33 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVM 92
R LQ + L+ ++ L L Q EL + + +L+ LQ G VGEV+K +
Sbjct: 11 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQL 70
Query: 93 GKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKV 152
+ K +VK +YVV P TRVAL + + LP +VDPLV M
Sbjct: 71 TEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSH 130
Query: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
E + +Y IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLA
Sbjct: 131 EDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 190
Query: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
RAVA DC F++V S +V KYIGE +R++RE+F AR+H P IIFMDEID+IG R
Sbjct: 191 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS 250
Query: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
G+ + D E+QRT++ELLNQ+DGF+ +++K++MATNR D LD ALLRPGR+DRKI
Sbjct: 251 EGT-SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 309
Query: 333 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVT 392
PNE++RLDILKIH+ + ID + I + +G +GA+L+ VCTEAGMFA+R V
Sbjct: 310 PNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVV 369
Query: 393 QEDFEMAVAKVM-KKETEKNMSLR 415
QEDF AV KV K+ E + +
Sbjct: 370 QEDFMKAVRKVADSKKLESKLDYK 393
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 867 (310.3 bits), Expect = 9.9e-87, P = 9.9e-87
Identities = 183/384 (47%), Positives = 245/384 (63%)
Query: 33 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVM 92
R LQ + L+ ++ L L Q EL + + +L+ LQ G VGEV+K +
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQL 64
Query: 93 GKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKV 152
+ K +VK +YVV P TRVAL + + LP +VDPLV M
Sbjct: 65 TEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSH 124
Query: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
E + +Y IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLA
Sbjct: 125 EDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 184
Query: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
RAVA DC F++V S +V KYIGE +R++RE+F AR+H P IIFMDEID+IG R
Sbjct: 185 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS 244
Query: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
G+ + D E+QRT++ELLNQ+DGF+ +++K++MATNR D LD ALLRPGR+DRKI
Sbjct: 245 EGT-SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 303
Query: 333 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVT 392
PNE++RLDILKIH+ + ID + I + +G +GA+L+ VCTEAGMFA+R V
Sbjct: 304 PNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVV 363
Query: 393 QEDFEMAVAKVM-KKETEKNMSLR 415
QEDF AV KV K+ E + +
Sbjct: 364 QEDFMKAVRKVADSKKLESKLDYK 387
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 867 (310.3 bits), Expect = 9.9e-87, P = 9.9e-87
Identities = 183/384 (47%), Positives = 245/384 (63%)
Query: 33 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVM 92
R LQ + L+ ++ L L Q EL + + +L+ LQ G VGEV+K +
Sbjct: 19 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQL 78
Query: 93 GKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKV 152
+ K +VK +YVV P TRVAL + + LP +VDPLV M
Sbjct: 79 TEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSH 138
Query: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
E + +Y IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLA
Sbjct: 139 EDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 198
Query: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
RAVA DC F++V S +V KYIGE +R++RE+F AR+H P IIFMDEID+IG R
Sbjct: 199 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS 258
Query: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
G+ + D E+QRT++ELLNQ+DGF+ +++K++MATNR D LD ALLRPGR+DRKI
Sbjct: 259 EGT-SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 317
Query: 333 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVT 392
PNE++RLDILKIH+ + ID + I + +G +GA+L+ VCTEAGMFA+R V
Sbjct: 318 PNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVV 377
Query: 393 QEDFEMAVAKVM-KKETEKNMSLR 415
QEDF AV KV K+ E + +
Sbjct: 378 QEDFMKAVRKVADSKKLESKLDYK 401
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 867 (310.3 bits), Expect = 9.9e-87, P = 9.9e-87
Identities = 183/384 (47%), Positives = 245/384 (63%)
Query: 33 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVM 92
R LQ + L+ ++ L L Q EL + + +L+ LQ G VGEV+K +
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQL 64
Query: 93 GKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKV 152
+ K +VK +YVV P TRVAL + + LP +VDPLV M
Sbjct: 65 TEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSH 124
Query: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
E + +Y IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLA
Sbjct: 125 EDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 184
Query: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
RAVA DC F++V S +V KYIGE +R++RE+F AR+H P IIFMDEID+IG R
Sbjct: 185 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS 244
Query: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
G+ + D E+QRT++ELLNQ+DGF+ +++K++MATNR D LD ALLRPGR+DRKI
Sbjct: 245 EGT-SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 303
Query: 333 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVT 392
PNE++RLDILKIH+ + ID + I + +G +GA+L+ VCTEAGMFA+R V
Sbjct: 304 PNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVV 363
Query: 393 QEDFEMAVAKVM-KKETEKNMSLR 415
QEDF AV KV K+ E + +
Sbjct: 364 QEDFMKAVRKVADSKKLESKLDYK 387
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 867 (310.3 bits), Expect = 9.9e-87, P = 9.9e-87
Identities = 183/384 (47%), Positives = 245/384 (63%)
Query: 33 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVM 92
R LQ + L+ ++ L L Q EL + + +L+ LQ G VGEV+K +
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQL 64
Query: 93 GKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKV 152
+ K +VK +YVV P TRVAL + + LP +VDPLV M
Sbjct: 65 TEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSH 124
Query: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
E + +Y IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLA
Sbjct: 125 EDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 184
Query: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
RAVA DC F++V S +V KYIGE +R++RE+F AR+H P IIFMDEID+IG R
Sbjct: 185 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS 244
Query: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
G+ + D E+QRT++ELLNQ+DGF+ +++K++MATNR D LD ALLRPGR+DRKI
Sbjct: 245 EGT-SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 303
Query: 333 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVT 392
PNE++RLDILKIH+ + ID + I + +G +GA+L+ VCTEAGMFA+R V
Sbjct: 304 PNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVV 363
Query: 393 QEDFEMAVAKVM-KKETEKNMSLR 415
QEDF AV KV K+ E + +
Sbjct: 364 QEDFMKAVRKVADSKKLESKLDYK 387
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 867 (310.3 bits), Expect = 9.9e-87, P = 9.9e-87
Identities = 183/384 (47%), Positives = 245/384 (63%)
Query: 33 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVM 92
R LQ + L+ ++ L L Q EL + + +L+ LQ G VGEV+K +
Sbjct: 19 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQL 78
Query: 93 GKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKV 152
+ K +VK +YVV P TRVAL + + LP +VDPLV M
Sbjct: 79 TEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSH 138
Query: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
E + +Y IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLA
Sbjct: 139 EDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 198
Query: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
RAVA DC F++V S +V KYIGE +R++RE+F AR+H P IIFMDEID+IG R
Sbjct: 199 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS 258
Query: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
G+ + D E+QRT++ELLNQ+DGF+ +++K++MATNR D LD ALLRPGR+DRKI
Sbjct: 259 EGT-SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 317
Query: 333 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVT 392
PNE++RLDILKIH+ + ID + I + +G +GA+L+ VCTEAGMFA+R V
Sbjct: 318 PNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVV 377
Query: 393 QEDFEMAVAKVM-KKETEKNMSLR 415
QEDF AV KV K+ E + +
Sbjct: 378 QEDFMKAVRKVADSKKLESKLDYK 401
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 866 (309.9 bits), Expect = 1.3e-86, P = 1.3e-86
Identities = 182/380 (47%), Positives = 244/380 (64%)
Query: 37 LQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNK 96
LQ + L+ ++ L L Q EL + + +L+ LQ G VGEV+K + + K
Sbjct: 1 LQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEK 60
Query: 97 VLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVP 156
+VK +YVV P TRVAL + + LP +VDPLV M E
Sbjct: 61 FIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPG 120
Query: 157 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216
+ +Y IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLARAVA
Sbjct: 121 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 180
Query: 217 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSG 276
DC F++V S +V KYIGE +R++RE+F AR+H P IIFMDEID+IG R G+
Sbjct: 181 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT- 239
Query: 277 NGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEE 336
+ D E+QRT++ELLNQ+DGF+ +++K++MATNR D LD ALLRPGR+DRKI PNE+
Sbjct: 240 SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ 299
Query: 337 SRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDF 396
+RLDILKIH+ + ID + I + +G +GA+L+ VCTEAGMFA+R V QEDF
Sbjct: 300 ARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDF 359
Query: 397 EMAVAKVM-KKETEKNMSLR 415
AV KV K+ E + +
Sbjct: 360 MKAVRKVADSKKLESKLDYK 379
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 865 (309.6 bits), Expect = 1.6e-86, P = 1.6e-86
Identities = 186/379 (49%), Positives = 247/379 (65%)
Query: 36 YLQHIHELQLQVRQKTHNLNRL----EAQRNELNSRVRMLKEELQLLQ-EPGSYVGEVVK 90
Y + I +++ ++Q +N L E+ + L + Q LQ E V K
Sbjct: 41 YSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTK 100
Query: 91 VMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPL 146
++ + K ++ V K+VV RV + + Y +H+ LP K+DP
Sbjct: 101 IITADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPT 160
Query: 147 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 206
V +M+VE+ PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGT
Sbjct: 161 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 220
Query: 207 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI 266
GKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+I
Sbjct: 221 GKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 280
Query: 267 GSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDR 326
G AR + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DR
Sbjct: 281 GGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 339
Query: 327 KIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
KIEF P+ E R ILKIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R
Sbjct: 340 KIEFSLPDLEGRTHILKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRA 399
Query: 387 RRIHVTQEDFEMAVAKVMK 405
RR T++DF AV KV+K
Sbjct: 400 RRKIATEKDFLEAVNKVIK 418
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 865 (309.6 bits), Expect = 1.6e-86, P = 1.6e-86
Identities = 180/340 (52%), Positives = 232/340 (68%)
Query: 71 LKEELQLLQEPGSY-VGEVVKVMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTR 125
L + Q++QE V K++ N K ++ V K+VV R
Sbjct: 73 LVSDKQMMQEEQPLQVARCTKIISPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMR 132
Query: 126 VALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPE 185
V + + Y + + LP K+DP V +M VE+ PD TY+ +GG +QI++++EV+ELP+ HPE
Sbjct: 133 VGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPE 192
Query: 186 LFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRE 245
F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GEG+RMVRE
Sbjct: 193 KFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRE 252
Query: 246 LFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVL 305
LF MAR I+F DE+D+IG AR + G G GD+EVQRTMLE++NQLDGF+A IKVL
Sbjct: 253 LFQMARSKKACIVFFDEVDAIGGARFDDGVG-GDNEVQRTMLEIVNQLDGFDARGNIKVL 311
Query: 306 MATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMN 365
MATNR D LD ALLRPGR+DRK+EF P+ ESR I KIH+R MN R I + +A
Sbjct: 312 MATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCP 371
Query: 366 GASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 405
++GA++++VCTEAGM+A+R RR VT++DF AV KV+K
Sbjct: 372 NSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIK 411
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 864 (309.2 bits), Expect = 2.0e-86, P = 2.0e-86
Identities = 186/383 (48%), Positives = 247/383 (64%)
Query: 31 GLRQYY--LQHIHE-LQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQ-EPGSYVG 86
G QY+ ++ I E +Q V+Q E+ + L + Q+LQ E V
Sbjct: 37 GQSQYHKSIKSIEEDIQKAVKQVNELTGIKESDTGLAPPALWDLAADKQILQNEQPLQVA 96
Query: 87 EVVKVMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSK 142
K++ + K ++ V K+VV RV + + Y +H+ LP K
Sbjct: 97 RCTKIINADSDDPKYIINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPK 156
Query: 143 VDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYG 202
+DP V +M+VE PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+G
Sbjct: 157 IDPTVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFG 216
Query: 203 PPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDE 262
PPGTGKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DE
Sbjct: 217 PPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDE 276
Query: 263 IDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPG 322
ID+IG AR + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPG
Sbjct: 277 IDAIGGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPG 335
Query: 323 RIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMF 382
R+DRK+EF P+++ R I KIH+R M++ R I +A ++GAE+++VCTEAGMF
Sbjct: 336 RLDRKVEFGLPDQDGRSHIFKIHARSMSVERDIRFDLLARLCPNSTGAEIRSVCTEAGMF 395
Query: 383 ALRERRIHVTQEDFEMAVAKVMK 405
A+R RR T++DF AV KV+K
Sbjct: 396 AIRARRKVATEKDFLEAVKKVIK 418
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 185/379 (48%), Positives = 246/379 (64%)
Query: 36 YLQHIHELQLQVRQKTHNLNRL----EAQRNELNSRVRMLKEELQLLQ-EPGSYVGEVVK 90
Y + I +++ ++Q +N L E+ + L + Q LQ E V K
Sbjct: 32 YSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTK 91
Query: 91 VMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPL 146
++ + K ++ V K+VV RV + + Y +H+ LP K+DP
Sbjct: 92 IINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPT 151
Query: 147 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 206
V +M+VE+ PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGT
Sbjct: 152 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 211
Query: 207 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI 266
GKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+I
Sbjct: 212 GKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 271
Query: 267 GSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDR 326
G AR + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DR
Sbjct: 272 GGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 330
Query: 327 KIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
KIEF P+ E R I KIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R
Sbjct: 331 KIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRA 390
Query: 387 RRIHVTQEDFEMAVAKVMK 405
RR T++DF AV KV+K
Sbjct: 391 RRKIATEKDFLEAVNKVIK 409
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 185/379 (48%), Positives = 246/379 (64%)
Query: 36 YLQHIHELQLQVRQKTHNLNRL----EAQRNELNSRVRMLKEELQLLQ-EPGSYVGEVVK 90
Y + I +++ ++Q +N L E+ + L + Q LQ E V K
Sbjct: 40 YSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTK 99
Query: 91 VMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPL 146
++ + K ++ V K+VV RV + + Y +H+ LP K+DP
Sbjct: 100 IINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPT 159
Query: 147 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 206
V +M+VE+ PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGT
Sbjct: 160 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 219
Query: 207 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI 266
GKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+I
Sbjct: 220 GKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 279
Query: 267 GSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDR 326
G AR + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DR
Sbjct: 280 GGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 338
Query: 327 KIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
KIEF P+ E R I KIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R
Sbjct: 339 KIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRA 398
Query: 387 RRIHVTQEDFEMAVAKVMK 405
RR T++DF AV KV+K
Sbjct: 399 RRKIATEKDFLEAVNKVIK 417
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 183/384 (47%), Positives = 244/384 (63%)
Query: 33 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVM 92
R LQ + L+ ++ L L Q EL + + +L+ LQ G VGEV+K +
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQL 64
Query: 93 GKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKV 152
+ K +VK +YVV P TRVAL + + LP +VDPLV M
Sbjct: 65 TEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSH 124
Query: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
E + +Y IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLA
Sbjct: 125 EDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 184
Query: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
RAVA DC F++V S +V KYIGE +R++RE+F AR+H P IIFMDEID+IG R
Sbjct: 185 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS 244
Query: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
G+ + D E+QRT++ELLNQ+DGF+ +++K++MATNR D LD ALLRPGR+DRKI
Sbjct: 245 EGT-SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 303
Query: 333 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVT 392
PNE++RLDILKIH+ + ID + I + +G +GA+L VCTEAGMFA+R V
Sbjct: 304 PNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLGNVCTEAGMFAIRADHDFVV 363
Query: 393 QEDFEMAVAKVM-KKETEKNMSLR 415
QEDF AV KV K+ E + +
Sbjct: 364 QEDFMKAVRKVADSKKLESKLDYK 387
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 185/379 (48%), Positives = 246/379 (64%)
Query: 36 YLQHIHELQLQVRQKTHNLNRL----EAQRNELNSRVRMLKEELQLLQ-EPGSYVGEVVK 90
Y + I +++ ++Q +N L E+ + L + Q LQ E V K
Sbjct: 41 YSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTK 100
Query: 91 VMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPL 146
++ + K ++ V K+VV RV + + Y +H+ LP K+DP
Sbjct: 101 IINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPT 160
Query: 147 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 206
V +M+VE+ PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGT
Sbjct: 161 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 220
Query: 207 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI 266
GKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+I
Sbjct: 221 GKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 280
Query: 267 GSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDR 326
G AR + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DR
Sbjct: 281 GGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 339
Query: 327 KIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
KIEF P+ E R I KIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R
Sbjct: 340 KIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRA 399
Query: 387 RRIHVTQEDFEMAVAKVMK 405
RR T++DF AV KV+K
Sbjct: 400 RRKIATEKDFLEAVNKVIK 418
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 185/379 (48%), Positives = 246/379 (64%)
Query: 36 YLQHIHELQLQVRQKTHNLNRL----EAQRNELNSRVRMLKEELQLLQ-EPGSYVGEVVK 90
Y + I +++ ++Q +N L E+ + L + Q LQ E V K
Sbjct: 41 YSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTK 100
Query: 91 VMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPL 146
++ + K ++ V K+VV RV + + Y +H+ LP K+DP
Sbjct: 101 IINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPT 160
Query: 147 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 206
V +M+VE+ PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGT
Sbjct: 161 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 220
Query: 207 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI 266
GKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+I
Sbjct: 221 GKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 280
Query: 267 GSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDR 326
G AR + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DR
Sbjct: 281 GGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 339
Query: 327 KIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
KIEF P+ E R I KIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R
Sbjct: 340 KIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRA 399
Query: 387 RRIHVTQEDFEMAVAKVMK 405
RR T++DF AV KV+K
Sbjct: 400 RRKIATEKDFLEAVNKVIK 418
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 185/379 (48%), Positives = 246/379 (64%)
Query: 36 YLQHIHELQLQVRQKTHNLNRL----EAQRNELNSRVRMLKEELQLLQ-EPGSYVGEVVK 90
Y + I +++ ++Q +N L E+ + L + Q LQ E V K
Sbjct: 41 YSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTK 100
Query: 91 VMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPL 146
++ + K ++ V K+VV RV + + Y +H+ LP K+DP
Sbjct: 101 IINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPT 160
Query: 147 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 206
V +M+VE+ PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGT
Sbjct: 161 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 220
Query: 207 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI 266
GKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+I
Sbjct: 221 GKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 280
Query: 267 GSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDR 326
G AR + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DR
Sbjct: 281 GGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 339
Query: 327 KIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
KIEF P+ E R I KIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R
Sbjct: 340 KIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRA 399
Query: 387 RRIHVTQEDFEMAVAKVMK 405
RR T++DF AV KV+K
Sbjct: 400 RRKIATEKDFLEAVNKVIK 418
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 185/379 (48%), Positives = 246/379 (64%)
Query: 36 YLQHIHELQLQVRQKTHNLNRL----EAQRNELNSRVRMLKEELQLLQ-EPGSYVGEVVK 90
Y + I +++ ++Q +N L E+ + L + Q LQ E V K
Sbjct: 83 YSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTK 142
Query: 91 VMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPL 146
++ + K ++ V K+VV RV + + Y +H+ LP K+DP
Sbjct: 143 IINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPT 202
Query: 147 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 206
V +M+VE+ PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGT
Sbjct: 203 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 262
Query: 207 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI 266
GKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+I
Sbjct: 263 GKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 322
Query: 267 GSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDR 326
G AR + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DR
Sbjct: 323 GGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 381
Query: 327 KIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
KIEF P+ E R I KIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R
Sbjct: 382 KIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRA 441
Query: 387 RRIHVTQEDFEMAVAKVMK 405
RR T++DF AV KV+K
Sbjct: 442 RRKIATEKDFLEAVNKVIK 460
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 185/379 (48%), Positives = 246/379 (64%)
Query: 36 YLQHIHELQLQVRQKTHNLNRL----EAQRNELNSRVRMLKEELQLLQ-EPGSYVGEVVK 90
Y + I +++ ++Q +N L E+ + L + Q LQ E V K
Sbjct: 41 YSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTK 100
Query: 91 VMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPL 146
++ + K ++ V K+VV RV + + Y +H+ LP K+DP
Sbjct: 101 IINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPT 160
Query: 147 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 206
V +M+VE+ PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGT
Sbjct: 161 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 220
Query: 207 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI 266
GKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+I
Sbjct: 221 GKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 280
Query: 267 GSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDR 326
G AR + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DR
Sbjct: 281 GGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 339
Query: 327 KIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
KIEF P+ E R I KIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R
Sbjct: 340 KIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRA 399
Query: 387 RRIHVTQEDFEMAVAKVMK 405
RR T++DF AV KV+K
Sbjct: 400 RRKVATEKDFLEAVNKVIK 418
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 185/379 (48%), Positives = 246/379 (64%)
Query: 36 YLQHIHELQLQVRQKTHNLNRL----EAQRNELNSRVRMLKEELQLLQ-EPGSYVGEVVK 90
Y + I +++ ++Q +N L E+ + L + Q LQ E V K
Sbjct: 41 YSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTK 100
Query: 91 VMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPL 146
++ + K ++ V K+VV RV + + Y +H+ LP K+DP
Sbjct: 101 IINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPT 160
Query: 147 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 206
V +M+VE+ PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGT
Sbjct: 161 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 220
Query: 207 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI 266
GKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+I
Sbjct: 221 GKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 280
Query: 267 GSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDR 326
G AR + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DR
Sbjct: 281 GGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 339
Query: 327 KIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
KIEF P+ E R I KIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R
Sbjct: 340 KIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRA 399
Query: 387 RRIHVTQEDFEMAVAKVMK 405
RR T++DF AV KV+K
Sbjct: 400 RRKIATEKDFLEAVNKVIK 418
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 185/379 (48%), Positives = 246/379 (64%)
Query: 36 YLQHIHELQLQVRQKTHNLNRL----EAQRNELNSRVRMLKEELQLLQ-EPGSYVGEVVK 90
Y + I +++ ++Q +N L E+ + L + Q LQ E V K
Sbjct: 41 YSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTK 100
Query: 91 VMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPL 146
++ + K ++ V K+VV RV + + Y +H+ LP K+DP
Sbjct: 101 IINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPT 160
Query: 147 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 206
V +M+VE+ PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGT
Sbjct: 161 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 220
Query: 207 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI 266
GKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+I
Sbjct: 221 GKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 280
Query: 267 GSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDR 326
G AR + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DR
Sbjct: 281 GGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 339
Query: 327 KIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
KIEF P+ E R I KIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R
Sbjct: 340 KIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRA 399
Query: 387 RRIHVTQEDFEMAVAKVMK 405
RR T++DF AV KV+K
Sbjct: 400 RRKIATEKDFLEAVNKVIK 418
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 185/379 (48%), Positives = 246/379 (64%)
Query: 36 YLQHIHELQLQVRQKTHNLNRL----EAQRNELNSRVRMLKEELQLLQ-EPGSYVGEVVK 90
Y + I +++ ++Q +N L E+ + L + Q LQ E V K
Sbjct: 41 YSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTK 100
Query: 91 VMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPL 146
++ + K ++ V K+VV RV + + Y +H+ LP K+DP
Sbjct: 101 IINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPT 160
Query: 147 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 206
V +M+VE+ PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGT
Sbjct: 161 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 220
Query: 207 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI 266
GKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+I
Sbjct: 221 GKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 280
Query: 267 GSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDR 326
G AR + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DR
Sbjct: 281 GGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 339
Query: 327 KIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
KIEF P+ E R I KIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R
Sbjct: 340 KIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRA 399
Query: 387 RRIHVTQEDFEMAVAKVMK 405
RR T++DF AV KV+K
Sbjct: 400 RRKIATEKDFLEAVNKVIK 418
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 859 (307.4 bits), Expect = 6.9e-86, P = 6.9e-86
Identities = 171/350 (48%), Positives = 246/350 (70%)
Query: 55 NRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXX 114
N+ + + ++ + V++ ++L+ P S VG + +++ +N ++ +Y V
Sbjct: 90 NQEQIKSSDDKNYVKLKIDDLR--GSPVS-VGTLEELIDENHGIIATSVGPEYYVNILSF 146
Query: 115 XXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIK 174
P V L N + + IL +VDPLV++MKVEK P +Y IGGL+ QI+EIK
Sbjct: 147 VDKDLLEPGCSVLLNNKTNSVVGILLDEVDPLVSVMKVEKAPLESYADIGGLESQIQEIK 206
Query: 175 EVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK 234
E +ELP+ HPEL+E +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSEL+QK
Sbjct: 207 EAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQK 266
Query: 235 YIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLD 294
Y+G+G ++VRE+F +A EHAPSI+F+DEID++G+ R E+ SG G+ E+QRTMLELLNQLD
Sbjct: 267 YLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSG-GEREIQRTMLELLNQLD 325
Query: 295 GFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRG 354
GF++ +KV+MATNRID LD AL+RPGRIDRKI+ PNP+ +++ I +IH+ +M +
Sbjct: 326 GFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKRRIFQIHTSKMTMSPD 385
Query: 355 IDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVM 404
+DL++ + SGA++KA+CTEAG+ ALRERR+ +TQ D A K +
Sbjct: 386 VDLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQADLRKARDKAL 435
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 859 (307.4 bits), Expect = 6.9e-86, P = 6.9e-86
Identities = 171/350 (48%), Positives = 246/350 (70%)
Query: 55 NRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXX 114
N+ + + ++ + V++ ++L+ P S VG + +++ +N ++ +Y V
Sbjct: 90 NQEQIKSSDDKNYVKLKIDDLR--GSPVS-VGTLEELIDENHGIIATSVGPEYYVNILSF 146
Query: 115 XXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIK 174
P V L N + + IL +VDPLV++MKVEK P +Y IGGL+ QI+EIK
Sbjct: 147 VDKDLLEPGCSVLLNNKTNSVVGILLDEVDPLVSVMKVEKAPLESYADIGGLESQIQEIK 206
Query: 175 EVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK 234
E +ELP+ HPEL+E +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSEL+QK
Sbjct: 207 EAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQK 266
Query: 235 YIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLD 294
Y+G+G ++VRE+F +A EHAPSI+F+DEID++G+ R E+ SG G+ E+QRTMLELLNQLD
Sbjct: 267 YLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSG-GEREIQRTMLELLNQLD 325
Query: 295 GFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRG 354
GF++ +KV+MATNRID LD AL+RPGRIDRKI+ PNP+ +++ I +IH+ +M +
Sbjct: 326 GFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKRRIFQIHTSKMTMSPD 385
Query: 355 IDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVM 404
+DL++ + SGA++KA+CTEAG+ ALRERR+ +TQ D A K +
Sbjct: 386 VDLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQADLRKARDKAL 435
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 857 (306.7 bits), Expect = 1.1e-85, P = 1.1e-85
Identities = 172/310 (55%), Positives = 220/310 (70%)
Query: 96 KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKV 155
K ++ V K+VV RV + + Y +H+ LP K+DP V +M+VE+
Sbjct: 111 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 170
Query: 156 PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAV 215
PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 171 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 230
Query: 216 AHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGS 275
A+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+IG AR + G+
Sbjct: 231 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 290
Query: 276 GNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNE 335
G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DRKIEF P+
Sbjct: 291 G-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDL 349
Query: 336 ESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQED 395
E R I KIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R RR T++D
Sbjct: 350 EGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKD 409
Query: 396 FEMAVAKVMK 405
F AV KV+K
Sbjct: 410 FLEAVNKVIK 419
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 856 (306.4 bits), Expect = 1.4e-85, P = 1.4e-85
Identities = 184/379 (48%), Positives = 245/379 (64%)
Query: 36 YLQHIHELQLQVRQKTHNLNRL----EAQRNELNSRVRMLKEELQLLQ-EPGSYVGEVVK 90
Y + I +++ ++Q +N L E+ + L + Q LQ E V K
Sbjct: 41 YSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTK 100
Query: 91 VMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPL 146
++ + K ++ V K+VV RV + + Y +H+ LP K+DP
Sbjct: 101 IINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPT 160
Query: 147 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 206
V +M+VE+ PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGT
Sbjct: 161 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 220
Query: 207 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI 266
GKTL ARAVA+ TD FI V GSELVQKY+GEG+RMVRELF MAR +IF DEID+I
Sbjct: 221 GKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 280
Query: 267 GSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDR 326
G AR + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DR
Sbjct: 281 GGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 339
Query: 327 KIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
KIEF P+ E R I KIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R
Sbjct: 340 KIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRA 399
Query: 387 RRIHVTQEDFEMAVAKVMK 405
RR T++DF AV KV+K
Sbjct: 400 RRKIATEKDFLEAVNKVIK 418
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 856 (306.4 bits), Expect = 1.4e-85, P = 1.4e-85
Identities = 184/379 (48%), Positives = 245/379 (64%)
Query: 36 YLQHIHELQLQVRQKTHNLNRL----EAQRNELNSRVRMLKEELQLLQ-EPGSYVGEVVK 90
Y + I +++ ++Q +N L E+ + L + Q LQ E V K
Sbjct: 41 YSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTK 100
Query: 91 VMGKN----KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPL 146
++ + K ++ V K+VV RV + + Y +H+ LP K+DP
Sbjct: 101 IINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPT 160
Query: 147 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 206
V +M+VE+ PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGT
Sbjct: 161 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 220
Query: 207 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI 266
GKTL ARAVA+ TD FI V GSELVQKY+GEG+RMVRELF MAR +IF DEID+I
Sbjct: 221 GKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 280
Query: 267 GSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDR 326
G AR + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DR
Sbjct: 281 GGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 339
Query: 327 KIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
KIEF P+ E R I KIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R
Sbjct: 340 KIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRA 399
Query: 387 RRIHVTQEDFEMAVAKVMK 405
RR T++DF AV KV+K
Sbjct: 400 RRKIATEKDFLEAVNKVIK 418
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 855 (306.0 bits), Expect = 1.8e-85, P = 1.8e-85
Identities = 176/338 (52%), Positives = 230/338 (68%)
Query: 72 KEELQLLQEPGSYVGEVVKVMGKNK----VLVKVHPEGKYVVXXXXXXXXXXXXPSTRVA 127
K+ +Q QE V K++ +K L+ V K+VV RV
Sbjct: 86 KQAMQ--QEQPLQVARCTKIITSDKHDPRYLINVKQFAKFVVDLADSVAPTDIEEGMRVG 143
Query: 128 LRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELF 187
+ + Y +HL LP+K+DP V +M+VE+ PD TY +GG QI++++EV+E P+ HPE +
Sbjct: 144 VDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERY 203
Query: 188 ESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELF 247
+LGI PKGVLLYGPPGTGKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF
Sbjct: 204 VNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF 263
Query: 248 VMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMA 307
MAR +IF DEID++G AR + G G GD+EVQRTMLEL+NQLDGF+ IKVLMA
Sbjct: 264 EMARTKKACLIFFDEIDAVGGARFDDGQG-GDNEVQRTMLELINQLDGFDPRGNIKVLMA 322
Query: 308 TNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGA 367
TNR D LD AL+RPGR+DRK+EF P+ R ILKIH+++M++ R I +A +
Sbjct: 323 TNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNS 382
Query: 368 SGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 405
+GAE+++VCTEAGMFA+R RR T++DF A+ KV+K
Sbjct: 383 TGAEIRSVCTEAGMFAIRARRKVATEKDFLEAINKVVK 420
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 855 (306.0 bits), Expect = 1.8e-85, P = 1.8e-85
Identities = 176/338 (52%), Positives = 230/338 (68%)
Query: 72 KEELQLLQEPGSYVGEVVKVMGKNK----VLVKVHPEGKYVVXXXXXXXXXXXXPSTRVA 127
K+ +Q QE V K++ +K L+ V K+VV RV
Sbjct: 86 KQAMQ--QEQPLQVARCTKIITSDKHDPRYLINVKQFAKFVVDLADSVAPTDIEEGMRVG 143
Query: 128 LRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELF 187
+ + Y +HL LP+K+DP V +M+VE+ PD TY +GG QI++++EV+E P+ HPE +
Sbjct: 144 VDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERY 203
Query: 188 ESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELF 247
+LGI PKGVLLYGPPGTGKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF
Sbjct: 204 VNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF 263
Query: 248 VMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMA 307
MAR +IF DEID++G AR + G G GD+EVQRTMLEL+NQLDGF+ IKVLMA
Sbjct: 264 EMARTKKACLIFFDEIDAVGGARFDDGQG-GDNEVQRTMLELINQLDGFDPRGNIKVLMA 322
Query: 308 TNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGA 367
TNR D LD AL+RPGR+DRK+EF P+ R ILKIH+++M++ R I +A +
Sbjct: 323 TNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNS 382
Query: 368 SGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 405
+GAE+++VCTEAGMFA+R RR T++DF A+ KV+K
Sbjct: 383 TGAEIRSVCTEAGMFAIRARRKVATEKDFLEAINKVVK 420
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
Identities = 186/409 (45%), Positives = 263/409 (64%)
Query: 2 AAVGIETKQPESAAPEEVCAAKGASKQGE-GLRQYYLQHIHELQLQVRQKTHNLNRLEAQ 60
A VG KQ + PE + + LR L+ I + L + N RL+ Q
Sbjct: 34 ARVG--RKQRKQKGPEAAARLPTVTPSTKCKLRLLKLERIKDYLLMEEEFVANQERLKPQ 91
Query: 61 RNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXX 120
+ R ++L+ P S VG + +++ +N +V +Y V
Sbjct: 92 EEKAEED-RSKVDDLR--GTPMS-VGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQL 147
Query: 121 XPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 180
P + + N + IL +VDP+V++MKVEK P +Y IGGL+ QI+EIKE +ELP
Sbjct: 148 EPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELP 207
Query: 181 IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS 240
+ HPEL+E +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G
Sbjct: 208 LTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGP 267
Query: 241 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASN 300
++VRELF +A + +PSI+F+DEID++G+ R ++ SG G+ E+QRTMLELLNQLDGF++
Sbjct: 268 KLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSG-GEREIQRTMLELLNQLDGFDSRG 326
Query: 301 KIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKI 360
+KV++ATNRI+ LD ALLRPGRIDRKIEFP P+ ++R I +IH+ +M L ++L++
Sbjct: 327 DVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLAEDVNLEEF 386
Query: 361 AEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 409
+ SGA++KA+CTEAG+ ALRERR+ VT DF+ A KVM K+ E
Sbjct: 387 VMTKDEFSGADIKAICTEAGLLALRERRMKVTHVDFKKAKEKVMFKKKE 435
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
Identities = 186/409 (45%), Positives = 263/409 (64%)
Query: 2 AAVGIETKQPESAAPEEVCAAKGASKQGE-GLRQYYLQHIHELQLQVRQKTHNLNRLEAQ 60
A VG KQ + PE + + LR L+ I + L + N RL+ Q
Sbjct: 34 ARVG--RKQRKQKGPEAAARLPTVTPSTKCKLRLLKLERIKDYLLMEEEFVANQERLKPQ 91
Query: 61 RNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXX 120
+ R ++L+ P S VG + +++ +N +V +Y V
Sbjct: 92 EEKAEED-RSKVDDLR--GTPMS-VGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQL 147
Query: 121 XPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 180
P + + N + IL +VDP+V++MKVEK P +Y IGGL+ QI+EIKE +ELP
Sbjct: 148 EPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELP 207
Query: 181 IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS 240
+ HPEL+E +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G
Sbjct: 208 LTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGP 267
Query: 241 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASN 300
++VRELF +A + +PSI+F+DEID++G+ R ++ SG G+ E+QRTMLELLNQLDGF++
Sbjct: 268 KLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSG-GEREIQRTMLELLNQLDGFDSRG 326
Query: 301 KIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKI 360
+KV++ATNRI+ LD ALLRPGRIDRKIEFP P+ ++R I +IH+ +M L ++L++
Sbjct: 327 DVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLSEDVNLEEF 386
Query: 361 AEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 409
+ SGA++KA+CTEAG+ ALRERR+ VT DF+ A KVM K+ E
Sbjct: 387 VMTKDEFSGADIKAICTEAGLLALRERRMKVTHPDFKKAKEKVMFKKKE 435
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 849 (303.9 bits), Expect = 8.0e-85, P = 8.0e-85
Identities = 180/380 (47%), Positives = 252/380 (66%)
Query: 32 LRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKV 91
LR +Q IH+ L + N RL+ Q +E R +E++ P S VG + ++
Sbjct: 67 LRLLKMQRIHDHLLMEEEYVQNQERLKPQ-DERTQEERNRVDEIR--GTPMS-VGTLEEI 122
Query: 92 MGKNKVLVKVH-PEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLM 150
+ + +V PE Y V P V L + + + +L DP++N+M
Sbjct: 123 IDDDHAIVSTAGPE--YYVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDDTDPMINVM 180
Query: 151 KVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTL 210
K++K P +Y IGGL+ QI+EIKE +ELP+ HPEL+E +GI PKGV+LYG PGTGKTL
Sbjct: 181 KLDKAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTL 240
Query: 211 LARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSAR 270
LA+AVA+ T TF+RV GSEL+QKY+G+G R+VR+LF A EH+PSI+F+DEID+IG+ R
Sbjct: 241 LAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKR 300
Query: 271 MESGSGNGDSEVQRTMLELLNQLDGFEASNK-IKVLMATNRIDILDQALLRPGRIDRKIE 329
++ SG + E+QRTMLELLNQLDGF+ S + IKV+MATNRI LD AL+RPGRIDRKI
Sbjct: 301 YDAQSG-AEREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPALIRPGRIDRKIL 359
Query: 330 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 389
F NP+E ++ I IH+ +MNL ++L+++ + + SGAE+KA+ +EAG+ ALRERR+
Sbjct: 360 FENPDEATKRKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIKAIVSEAGLLALRERRM 419
Query: 390 HVTQEDFEMAVAKVMKKETE 409
V +DF A KV+K + E
Sbjct: 420 RVVMDDFRQAREKVLKTKDE 439
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 849 (303.9 bits), Expect = 8.0e-85, P = 8.0e-85
Identities = 177/368 (48%), Positives = 242/368 (65%)
Query: 36 YLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKN 95
Y + + E + + QK +L + E+ E+ + + +++ LQ G VGEV+K + +
Sbjct: 29 YRRKLAECR-DIEQKLKDLRKKES---EMTKQFDKSENDIKSLQSVGQIVGEVLKQLSEE 84
Query: 96 KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKV 155
K +VK +YVV TRV+L + + LP +VDPLV M E
Sbjct: 85 KFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDP 144
Query: 156 PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAV 215
+ +Y +GGL +QI+E++EV+ELP+ +PELF+ +GI PKG LL+GPPGTGKTLLARAV
Sbjct: 145 GNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAV 204
Query: 216 AHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGS 275
A DC F++V S +V KYIGE +RM+RE+F AR+H P I+FMDEID+IG R G+
Sbjct: 205 ASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGT 264
Query: 276 GNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNE 335
+ D E+QRT++ELLNQLDGF++ K+KV+MATNR D LD ALLRPGR+DRKIE PNE
Sbjct: 265 -SADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNE 323
Query: 336 ESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQED 395
+SRL+ILKIHS ++ ID + + + +G S A+L+ VCTEAGMFA+R R V ED
Sbjct: 324 QSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDED 383
Query: 396 FEMAVAKV 403
F AV KV
Sbjct: 384 FMKAVRKV 391
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 849 (303.9 bits), Expect = 8.0e-85, P = 8.0e-85
Identities = 177/368 (48%), Positives = 242/368 (65%)
Query: 36 YLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKN 95
Y + + E + + QK +L + E+ E+ + + +++ LQ G VGEV+K + +
Sbjct: 29 YRRKLAECR-DIEQKLKDLRKKES---EMTKQFDKSENDIKSLQSVGQIVGEVLKQLSEE 84
Query: 96 KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKV 155
K +VK +YVV TRV+L + + LP +VDPLV M E
Sbjct: 85 KFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDP 144
Query: 156 PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAV 215
+ +Y +GGL +QI+E++EV+ELP+ +PELF+ +GI PKG LL+GPPGTGKTLLARAV
Sbjct: 145 GNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAV 204
Query: 216 AHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGS 275
A DC F++V S +V KYIGE +RM+RE+F AR+H P I+FMDEID+IG R G+
Sbjct: 205 ASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGT 264
Query: 276 GNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNE 335
+ D E+QRT++ELLNQLDGF++ K+KV+MATNR D LD ALLRPGR+DRKIE PNE
Sbjct: 265 -SADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNE 323
Query: 336 ESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQED 395
+SRL+ILKIHS ++ ID + + + +G S A+L+ VCTEAGMFA+R R V ED
Sbjct: 324 QSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDED 383
Query: 396 FEMAVAKV 403
F AV KV
Sbjct: 384 FMKAVRKV 391
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
Identities = 177/386 (45%), Positives = 246/386 (63%)
Query: 33 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVM 92
R+ L+ L +R+ L L +L + +E ++ LQ G +GEV+K +
Sbjct: 9 REQALEEYKRSLLDLREWEAKLKALRMGIKDLQREFDISEENIKALQSVGQIIGEVLKQL 68
Query: 93 GKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKV 152
+ + +VK +YVV TRVAL + + +LP +VDPLV M +
Sbjct: 69 DEERFIVKASSGPRYVVGCRSKVDRSKLKQGTRVALDMTTLTIMRMLPREVDPLVYNMSL 128
Query: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
E + IGGL+ QI+E++EVIELP+K+PELF+ +GI PKGVLLYGPPGTGKTLLA
Sbjct: 129 EDPGQINFAGIGGLNDQIRELREVIELPLKNPELFQRVGIKPPKGVLLYGPPGTGKTLLA 188
Query: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
RAVA + F++V S +V KYIGE +R++RE+F A+EH P IIFMDEID+IG R
Sbjct: 189 RAVASSMETNFLKVVSSAIVDKYIGESARLIREMFGYAKEHEPCIIFMDEIDAIGGRRFS 248
Query: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
G+ + D E+QRT++ELLNQLDGF+ K K++MATNR D LD ALLR GR+DRKIE P
Sbjct: 249 EGT-SADREIQRTLMELLNQLDGFDYLGKTKIIMATNRPDTLDPALLRAGRLDRKIEIPL 307
Query: 333 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVT 392
PNE RL+ILKIHS + + ID + + + +G +GA+L+ V TEAG+FA+++ R +
Sbjct: 308 PNEVGRLEILKIHSSTVQMEGDIDFESVVKMSDGLNGADLRNVVTEAGLFAIKDYRDAIN 367
Query: 393 QEDFEMAVAKVMK-KETEKNMSLRKL 417
Q+DF AV KV + K+ E + +KL
Sbjct: 368 QDDFNRAVRKVAEAKKLEGKLEYQKL 393
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
Identities = 177/388 (45%), Positives = 250/388 (64%)
Query: 25 ASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSY 84
A ++ + Y + +H +L+ R +T N L A + E N +++L+ LQ G
Sbjct: 8 ARRRTAAVTDYRKKLLHHKELESRVRTAREN-LRAAKKEFNKT----EDDLKSLQSVGQI 62
Query: 85 VGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVD 144
+GEV++ + +++VK +YVV TRV L + + LP +VD
Sbjct: 63 IGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVD 122
Query: 145 PLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPP 204
P+V M E + +Y +GGL QI+E++E IELP+ +PELF +GI PKGVLLYGPP
Sbjct: 123 PVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPP 182
Query: 205 GTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 264
GTGKTLLARA+A + D F++V S ++ KYIGE +R++RE+F AREH P IIFMDEID
Sbjct: 183 GTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEID 242
Query: 265 SIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRI 324
+IG R G+ + D E+QRT++ELLNQLDGF+ K+K++MATNR D+LD ALLRPGR+
Sbjct: 243 AIGGRRFSEGT-SADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRL 301
Query: 325 DRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFAL 384
DRKIE P PNE+SR++ILKIH+ + ID + I + G +GA+L+ +CTEAGMFA+
Sbjct: 302 DRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAI 361
Query: 385 RERRIHVTQEDFEMAVAKVMK-KETEKN 411
R R +V EDF AV K+ + K+ E +
Sbjct: 362 RAERDYVIHEDFMKAVRKLSEAKKLESS 389
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
Identities = 179/380 (47%), Positives = 246/380 (64%)
Query: 33 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVM 92
R+ LQH EL+ +VR NL + E N +++L+ LQ G +GEV++ +
Sbjct: 19 RKKLLQH-KELESRVRTARENLR---GAKKEFNKT----EDDLKSLQSVGQIIGEVLRPL 70
Query: 93 GKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKV 152
+++VK +YVV TRV L + + LP +VDP+V M
Sbjct: 71 DNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLH 130
Query: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
E + +Y +GGL QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLA
Sbjct: 131 EDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLA 190
Query: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
RA+A + D F++V S ++ KYIGE +R++RE+F AREH P IIFMDEID+IG R
Sbjct: 191 RAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFS 250
Query: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
G+ + D E+QRT++ELLNQLDGF+ K+K++MATNR D+LD ALLRPGR+DRKIE P
Sbjct: 251 EGT-SADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPL 309
Query: 333 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVT 392
PNE+SR+DILKIH+ + ID + I + G +GA+L+ +CTEAGMFA+R R +V
Sbjct: 310 PNEQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAERDYVI 369
Query: 393 QEDFEMAVAKVMK-KETEKN 411
EDF AV K+ + K+ E +
Sbjct: 370 HEDFMKAVRKLSEAKKLESS 389
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 845 (302.5 bits), Expect = 2.1e-84, P = 2.1e-84
Identities = 166/343 (48%), Positives = 237/343 (69%)
Query: 73 EELQLLQEPGSY---VGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALR 129
EE + + E Y +G + +++ + +V +Y V P V L
Sbjct: 95 EEREKVDELRGYPMAIGTLEEIIDDDHAIVSSTASSEYYVSIMSFVDKGLLEPGCSVLLH 154
Query: 130 NDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFES 189
+ + + +L DP+V++MK++K P +Y IGGL+ QI+EIKE +ELP+ HPEL+E
Sbjct: 155 HKTVAVVGVLQDDADPMVSVMKLDKSPTESYADIGGLESQIQEIKESVELPLTHPELYEE 214
Query: 190 LGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVM 249
+GI PKGV+LYG PGTGKTLLA+AVA+ T TF+R+ GSEL+QKY+G+G R+ R++F +
Sbjct: 215 MGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFQI 274
Query: 250 AREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATN 309
A +HAPSI+F+DEID+IG+ R ES SG G+ E+QRTMLELLNQLDGF+ IKV+MATN
Sbjct: 275 AADHAPSIVFIDEIDAIGTKRYESTSG-GEREIQRTMLELLNQLDGFDDRGDIKVIMATN 333
Query: 310 RIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASG 369
+I+ LD AL+RPGRIDRKI F NP+ ++ IL IH+ +M+L ++L +I + SG
Sbjct: 334 KIESLDPALIRPGRIDRKILFENPDANTKKKILTIHTSKMSLADDVNLDEIVTGKDDLSG 393
Query: 370 AELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNM 412
A++KA+CTEAG+ ALRERR+ V EDF+ A +V+K + E+N+
Sbjct: 394 ADIKAICTEAGLLALRERRMQVKAEDFKSAKERVLKNKVEENL 436
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 845 (302.5 bits), Expect = 2.1e-84, P = 2.1e-84
Identities = 167/281 (59%), Positives = 212/281 (75%)
Query: 125 RVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHP 184
RV + + Y +H+ LP K+DP V +M+VE+ PD TY +GG +QI++++EV+E P+ HP
Sbjct: 2 RVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHP 61
Query: 185 ELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVR 244
E F +LGI PKGVLL+GPPGTGKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVR
Sbjct: 62 ERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVR 121
Query: 245 ELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKV 304
ELF MAR +IF DEID+IG AR + G+G GD+EVQRTMLEL+NQLDGF+ IKV
Sbjct: 122 ELFEMARTKKACLIFFDEIDAIGGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKV 180
Query: 305 LMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKM 364
LMATNR D LD AL+RPGR+DRKIEF P+ E R I KIH+R M++ R I + +A
Sbjct: 181 LMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLC 240
Query: 365 NGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 405
++GAE+++VCTEAGMFA+R RR T++DF AV KV+K
Sbjct: 241 PNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIK 281
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 845 (302.5 bits), Expect = 2.1e-84, P = 2.1e-84
Identities = 180/397 (45%), Positives = 257/397 (64%)
Query: 23 KGASKQGEGLRQYYLQHIHELQL--QVRQKTHNLNRLEAQRNE--LNSRVRMLKEELQLL 78
KG E L Y +L+L R K H L E N L + +EE + L
Sbjct: 37 KGGPATAEKLPNIYPSTRCKLKLLRMERIKDHLLLEEEFVSNSEILKPFEKKQEEEKKQL 96
Query: 79 QE-PGS--YVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVL 135
+E G+ +G + +++ + +V Y V P V L + + +
Sbjct: 97 EEIRGNPLSIGTLEEIIDDDHAIVTSPTMPDYYVSILSFVDKELLEPGCSVLLHHKTMSI 156
Query: 136 HLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQP 195
+L DP+V++MK++K P +Y IGGL+ QI+EIKE +ELP+ HPEL+E +GI P
Sbjct: 157 VGVLQDDADPMVSVMKMDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPP 216
Query: 196 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAP 255
KGV+LYG PGTGKTLLA+AVA+ T TF+R+ GSEL+QKY+G+G R+ R++F +A E+AP
Sbjct: 217 KGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAP 276
Query: 256 SIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILD 315
SI+F+DEID+IG+ R +S SG G+ E+QRTMLELLNQLDGF+ +KV+MATN+I+ LD
Sbjct: 277 SIVFIDEIDAIGTKRYDSNSG-GEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLD 335
Query: 316 QALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAV 375
AL+RPGRIDRKI F NP+ ++ IL IH+ +MNL ++L+ + + SGA+++A+
Sbjct: 336 PALIRPGRIDRKILFENPDLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAM 395
Query: 376 CTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNM 412
CTEAG+ ALRERR+ VT EDF+ A +VMK + E+N+
Sbjct: 396 CTEAGLLALRERRMQVTAEDFKQAKERVMKNKVEENL 432
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 844 (302.2 bits), Expect = 2.7e-84, P = 2.7e-84
Identities = 172/380 (45%), Positives = 250/380 (65%)
Query: 45 LQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPE 104
++ R+ + +L ELN + ++ L+ LQ G +G+V+K + K +VK
Sbjct: 15 IEHREIESKVKKLRLDIKELNKKYEKTEDNLKALQSVGQIIGQVLKQLEDEKFIVKASSG 74
Query: 105 GKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLV-NLMK-VEKVPDST--- 159
+YVV TRV+L + + LP +VDPLV N++ ++K +ST
Sbjct: 75 PRYVVGCKSKINKSKLVIGTRVSLDMTTLTVMKRLPCEVDPLVFNMISDIDKSENSTNKV 134
Query: 160 -YDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 218
Y+ IGGL +QI++++EV+ELPI +P L++ +GI PKGVLLYGPPGTGKTLLARA+A +
Sbjct: 135 NYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMASN 194
Query: 219 TDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNG 278
+C F+R+ S +V KYIGE +R++RE+F A+EH P IIFMDEID+IG R G+ +
Sbjct: 195 INCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRRFSQGT-SA 253
Query: 279 DSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR 338
D E+QRT++ELLN LDGFE +K++MATNR D+LD AL+RPGR+DRKIE P PNE +R
Sbjct: 254 DREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPLPNETAR 313
Query: 339 LDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEM 398
++ILKIH+ +M + ID + + +G +GA+L+ VCTEAGMFA+R R +V +EDF
Sbjct: 314 IEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMRDYVIEEDFYK 373
Query: 399 AVAKVMK-KETEKNMSLRKL 417
A K+ + K+ E + K+
Sbjct: 374 AARKISEGKKLEGKIEYEKI 393
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 844 (302.2 bits), Expect = 2.7e-84, P = 2.7e-84
Identities = 172/380 (45%), Positives = 250/380 (65%)
Query: 45 LQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPE 104
++ R+ + +L ELN + ++ L+ LQ G +G+V+K + K +VK
Sbjct: 15 IEHREIESKVKKLRLDIKELNKKYEKTEDNLKALQSVGQIIGQVLKQLEDEKFIVKASSG 74
Query: 105 GKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLV-NLMK-VEKVPDST--- 159
+YVV TRV+L + + LP +VDPLV N++ ++K +ST
Sbjct: 75 PRYVVGCKSKINKSKLVIGTRVSLDMTTLTVMKRLPCEVDPLVFNMISDIDKSENSTNKV 134
Query: 160 -YDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 218
Y+ IGGL +QI++++EV+ELPI +P L++ +GI PKGVLLYGPPGTGKTLLARA+A +
Sbjct: 135 NYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMASN 194
Query: 219 TDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNG 278
+C F+R+ S +V KYIGE +R++RE+F A+EH P IIFMDEID+IG R G+ +
Sbjct: 195 INCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRRFSQGT-SA 253
Query: 279 DSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR 338
D E+QRT++ELLN LDGFE +K++MATNR D+LD AL+RPGR+DRKIE P PNE +R
Sbjct: 254 DREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPLPNETAR 313
Query: 339 LDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEM 398
++ILKIH+ +M + ID + + +G +GA+L+ VCTEAGMFA+R R +V +EDF
Sbjct: 314 IEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMRDYVIEEDFYK 373
Query: 399 AVAKVMK-KETEKNMSLRKL 417
A K+ + K+ E + K+
Sbjct: 374 AARKISEGKKLEGKIEYEKI 393
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 842 (301.5 bits), Expect = 4.4e-84, P = 4.4e-84
Identities = 179/364 (49%), Positives = 240/364 (65%)
Query: 56 RLEAQRNELNSRVRML-KEE--LQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXX 112
RL+ +R E+ ++ K E L+ LQ G VGEV+K + ++K +VK +YVV
Sbjct: 33 RLKEKREEIKDLTKLYDKSENDLKALQSVGQIVGEVLKQLTEDKFIVKATNGPRYVVGCR 92
Query: 113 XXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKE 172
TRVAL + + LP +VDPLV M E D TY IGGL QI+E
Sbjct: 93 RQLDKAKLKSGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGDVTYSAIGGLTDQIRE 152
Query: 173 IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV 232
++EVIELP+ +PELF +GI PKG LLYGPPGTGKTLLARAVA D F++V S +V
Sbjct: 153 LREVIELPLLNPELFLRVGITPPKGCLLYGPPGTGKTLLARAVASQLDANFLKVVSSAIV 212
Query: 233 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQ 292
KYIGE +R++RE+F AR+H P IIFMDEID+IG R G+ + D E+QRT++ELLNQ
Sbjct: 213 DKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT-SADREIQRTLMELLNQ 271
Query: 293 LDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLM 352
+DGF++ ++K++MATNR D LD ALLRPGR+DRKIE P PNE++RL+ILKIH+ ++
Sbjct: 272 MDGFDSLGQVKMIMATNRPDSLDPALLRPGRLDRKIEIPLPNEQARLEILKIHALKIAKH 331
Query: 353 RGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVM-KKETEKN 411
ID + I + + +GA+L+ VCTEAG+FA+R R +V Q DF AV KV K+ E
Sbjct: 332 GEIDYEAIVKLSDNFNGADLRNVCTEAGLFAIRAEREYVIQGDFMKAVRKVSDNKKLESK 391
Query: 412 MSLR 415
+ +
Sbjct: 392 LDYK 395
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 840 (300.8 bits), Expect = 7.2e-84, P = 7.2e-84
Identities = 178/379 (46%), Positives = 249/379 (65%)
Query: 36 YLQHIHELQLQVRQKTHNLNRL-EAQRNELN----SRVRMLKEELQLLQEPGSYVGEVVK 90
Y + I L+ +++ T +N L + ++ S+ ++ ++ +EP V K
Sbjct: 36 YSKSIRILEEDIKKMTSKVNELCGIKESDTGIGPPSQWDLVVDKTSAHEEPPLQVARCTK 95
Query: 91 VM--GK-N-KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPL 146
++ GK N K ++ V K+VV RV + + Y + + LP K+D
Sbjct: 96 IIDVGKPNAKYIITVKQIAKFVVALGDKLSPTDVEEGIRVGVDRNKYQIQIPLPPKIDAS 155
Query: 147 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 206
V +M+VE+ PD TY +GG +QI++++EV+E+P+ HPE F +LGI PKGVL+YGPPGT
Sbjct: 156 VTMMQVEEKPDITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGT 215
Query: 207 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI 266
GKTL ARAVA+ TD F+RV GSELVQKY+GEG+RMVR+LF MAR IIF DE+D+I
Sbjct: 216 GKTLCARAVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDEVDAI 275
Query: 267 GSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDR 326
G AR + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD ALLRPGR+DR
Sbjct: 276 GGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDR 334
Query: 327 KIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
K+EF P+ E R I IH++ M+ R I + +A ++GA++++VCTEAGMFA+R
Sbjct: 335 KVEFGLPDLEGRAHIFTIHAKTMSCARDIRFELLARLCPNSTGADIRSVCTEAGMFAIRA 394
Query: 387 RRIHVTQEDFEMAVAKVMK 405
RR V+++DF A+ KV+K
Sbjct: 395 RRKVVSEKDFLEAIDKVIK 413
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 836 (299.3 bits), Expect = 1.9e-83, P = 1.9e-83
Identities = 173/374 (46%), Positives = 242/374 (64%)
Query: 45 LQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPE 104
L+ R+ L L + +N+ +++L+ LQ G VGE++K + + +VK
Sbjct: 26 LEHREIESKLKALRDKYKVVNAEYEKSEDDLKALQSVGQMVGEILKQLTPDNFIVKASNG 85
Query: 105 GKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIG 164
+YVV P TRVAL + + LP +VDPLV M E + Y IG
Sbjct: 86 PRYVVGCRRQINKEKLKPGTRVALDVTTLTIMRYLPREVDPLVYNMTHEDPGNVNYAEIG 145
Query: 165 GLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFI 224
GL QQI+E++EVIELP+ +P++F +GI+ PKG LLYGPPGTGKTLLARA+A D F+
Sbjct: 146 GLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIASQMDANFL 205
Query: 225 RVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQR 284
+V S +V KYIGE +R++RE+F AR+H P IIFMDEID+IG R G+ + D E+QR
Sbjct: 206 KVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRFSEGT-SADREIQR 264
Query: 285 TMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKI 344
T++ELLNQ+DGF+A ++K++MATNR D LD ALLRPGR+DRK+E P PNE +R+DILKI
Sbjct: 265 TLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPLPNEVARMDILKI 324
Query: 345 HSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVM 404
H+ +N ID + + + + +GA+L+ +CTEAG+FALR R V QEDF AV K+
Sbjct: 325 HAEPLNKRGEIDYEAVVKLSDLFNGADLRNICTEAGLFALRCDREFVIQEDFMKAVRKIA 384
Query: 405 -KKETEKNMSLRKL 417
K+ E + + +
Sbjct: 385 DNKKLESRLDYKPI 398
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 833 (298.3 bits), Expect = 3.9e-83, P = 3.9e-83
Identities = 169/389 (43%), Positives = 253/389 (65%)
Query: 32 LRQYYLQHIHELQLQVRQKTHNLNRLE---------AQRNELNSRVRMLKEELQLLQEPG 82
LR +Q +H+ L + N+ RL A R +++ R E ++ G
Sbjct: 64 LRYLRMQRVHDHLLLEEEYVENMERLRKAKASASDSANRGDVDITDRNADERSRVDDMRG 123
Query: 83 SY--VGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILP 140
S VG + +++ + +V +Y V P + L + + + +L
Sbjct: 124 SPMGVGNLEELIDDDHAIVSSATGPEYYVSIMSFVDKDLLEPGASILLHHKTVSVVGVLT 183
Query: 141 SKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLL 200
+ DPLV++MK++K P +Y IGGL+ QI+E++E +ELP+ HPEL+E +GI PKGV+L
Sbjct: 184 EESDPLVSVMKLDKAPTESYADIGGLESQIQEVRESVELPLLHPELYEEMGIKPPKGVIL 243
Query: 201 YGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM 260
YG PGTGKTLLA+AVA+ T TF+R+ GSEL+QKY+G+G R+VR++F +A EHAPSI+F+
Sbjct: 244 YGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLVRQIFQVAAEHAPSIVFI 303
Query: 261 DEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLR 320
DEID+IG+ R +S SG G+ E+QRTMLELLNQLDGF+ +KV+MATN+I+ LD AL+R
Sbjct: 304 DEIDAIGTKRYDSTSG-GEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIR 362
Query: 321 PGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAG 380
PGRIDRKI F NP++ ++ I +H+ +M+L +DL + + + SGA+++A+CTEAG
Sbjct: 363 PGRIDRKILFENPDQNTKKKIFTLHTSKMSLGDDVDLDEFINQKDDLSGADIRAICTEAG 422
Query: 381 MFALRERRIHVTQEDFEMAVAKVMKKETE 409
+ ALRERR+ V +DF A ++MK + +
Sbjct: 423 LMALRERRMRVQMDDFRAARERIMKTKQD 451
>UNIPROTKB|J3QLH6 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031595 "nuclear proteasome complex"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003959 Pfam:PF00004
GO:GO:0005524 EMBL:AC015651 ChiTaRS:PSMC5 HGNC:HGNC:9552
Ensembl:ENST00000581842 Uniprot:J3QLH6
Length = 215
Score = 831 (297.6 bits), Expect = 6.4e-83, P = 6.4e-83
Identities = 163/209 (77%), Positives = 179/209 (85%)
Query: 27 KQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVG 86
K G GLRQYYL I ELQL V K+ NL RL+AQRNELN++VR+L+EELQLLQE GSYVG
Sbjct: 7 KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVG 66
Query: 87 EVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPL 146
EVV+ M K KVLVKVHPEGK+VV P+ RVALRNDSY LH ILP+KVDPL
Sbjct: 67 EVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPL 126
Query: 147 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 206
V+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHPELFE+LGIAQPKGVLLYGPPGT
Sbjct: 127 VSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGT 186
Query: 207 GKTLLARAVAHHTDCTFIRVSGSELVQKY 235
GKTLLARAVAHHTDCTFIRVSGSELVQK+
Sbjct: 187 GKTLLARAVAHHTDCTFIRVSGSELVQKF 215
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 831 (297.6 bits), Expect = 6.4e-83, P = 6.4e-83
Identities = 170/312 (54%), Positives = 216/312 (69%)
Query: 94 KNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVE 153
KN ++ + K+VV RV + Y + L LP K+DP V +M+VE
Sbjct: 112 KNAYVINLKQIAKFVVSLGERVSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPSVTMMQVE 171
Query: 154 KVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLAR 213
+ PD TY +GG +QI+ ++EV+ELP+ PE F LGI PKG++LYGPPGTGKTL AR
Sbjct: 172 EKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCAR 231
Query: 214 AVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMES 273
AVA+ TD TFIRV GSELVQKY+GEG+RMVRELF MAR IIF DEID+IG AR +
Sbjct: 232 AVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDD 291
Query: 274 GSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNP 333
G+G GD+EVQRTMLEL+ QLDGF+ IKVL ATNR + LD+AL+RPGRIDRK+EF P
Sbjct: 292 GAG-GDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLP 350
Query: 334 NEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQ 393
+ E R IL+IH++ M + + I + IA +GAEL++VCTEAGMFA+R RR T+
Sbjct: 351 DLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIRARRRVATE 410
Query: 394 EDFEMAVAKVMK 405
+DF AV KV+K
Sbjct: 411 KDFLDAVQKVVK 422
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 829 (296.9 bits), Expect = 1.0e-82, P = 1.0e-82
Identities = 168/312 (53%), Positives = 217/312 (69%)
Query: 94 KNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVE 153
K+K ++ + K+VV RV + Y + L LP ++DP V +M VE
Sbjct: 119 KSKYVINIKQIAKFVVGLGERLSPTDIEEGMRVGVDRHKYEIQLPLPPRIDPSVTMMTVE 178
Query: 154 KVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLAR 213
+ PD TY +GG +QI++++EV+ELP+ PE F LGI PKG+LLYGPPGTGKTL AR
Sbjct: 179 EKPDVTYSDVGGCKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTLCAR 238
Query: 214 AVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMES 273
AVA+ TD TFIRV GSELVQKY+GEG+RMVRELF MAR IIF DE+D+IG AR +
Sbjct: 239 AVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEVDAIGGARFDD 298
Query: 274 GSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNP 333
G+G GD+EVQRTMLEL+ QLDGF+ IKV+ ATNR + LD ALLRPGRIDRK+EF P
Sbjct: 299 GAG-GDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLP 357
Query: 334 NEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQ 393
+ E R +I +IHS+ M++ + I + I+ A+GAEL++VCTEAGMFA+R RR +
Sbjct: 358 DLEGRANIFRIHSKTMSVEKDIRWELISRLCPNATGAELRSVCTEAGMFAIRARRKVANE 417
Query: 394 EDFEMAVAKVMK 405
+DF AV KV+K
Sbjct: 418 KDFLKAVDKVIK 429
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 828 (296.5 bits), Expect = 1.3e-82, P = 1.3e-82
Identities = 168/309 (54%), Positives = 216/309 (69%)
Query: 96 KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKV 155
K ++ + K+VV RV + Y + L LP ++DP V +M VE+
Sbjct: 144 KYVINLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEK 203
Query: 156 PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAV 215
PD TY +GG QI++++EV+ELP+ PE F +LGI PKG+LLYGPPGTGKTL ARAV
Sbjct: 204 PDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAV 263
Query: 216 AHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGS 275
A+ TD TFIRV GSELVQKY+GEG+RMVRELF MAR IIF DEID++G AR + G+
Sbjct: 264 ANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGA 323
Query: 276 GNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNE 335
G GD+EVQRTMLEL+ QLDGF+ IKV+ ATNR + LD ALLRPGRIDRK+EF P+
Sbjct: 324 G-GDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDL 382
Query: 336 ESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQED 395
E R +I +IHS+ M++ RGI + I+ ++GAEL++VCTEAGMFA+R RR T++D
Sbjct: 383 EGRANIFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKD 442
Query: 396 FEMAVAKVM 404
F AV KV+
Sbjct: 443 FLKAVDKVI 451
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 826 (295.8 bits), Expect = 2.2e-82, P = 2.2e-82
Identities = 168/390 (43%), Positives = 248/390 (63%)
Query: 30 EGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVV 89
E ++ LQ+ + ++ + LN+ +L + ++ ++ +Q G +GEV+
Sbjct: 5 ETKKEQALQNYRDRLIEHKNAELRLNKAHELIKKLKKDFQKTEDHIKTIQYIGEIIGEVL 64
Query: 90 KVMGKNKVLVKVHPEGKYVVX-XXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVN 148
+ + + + +VK +YVV P RV L + + ILP +VDP++
Sbjct: 65 RSLDEERFIVKACNGPRYVVRCANYQDKAHLLVPGARVTLDLTTLTILKILPREVDPIIF 124
Query: 149 LMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 208
M E +Y IGGL QI+E++EV+ELP+ PELF +GI PKGVLLYGPPGTGK
Sbjct: 125 NMTAESPGSVSYGEIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLLYGPPGTGK 184
Query: 209 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 268
TLLARA+A + + F++V S +V KYIGE +R++RE+F AR+H P +IFMDEID+IG
Sbjct: 185 TLLARAIASNLEANFLKVVSSAIVDKYIGESARVIREMFGYARDHQPCVIFMDEIDAIGG 244
Query: 269 ARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKI 328
R G+ + D E+QRT++ELLNQ+DGF+ +K+K++MATNR D+LD ALLRPGR+DRKI
Sbjct: 245 RRFSEGT-SADREIQRTLMELLNQMDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKI 303
Query: 329 EFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR 388
E P PNE R+D+LKIH+ + +D + IA+ +G + A+L+ VCTEAGMFA+R R
Sbjct: 304 EIPLPNEAGRVDVLKIHAANITKHGDVDYEAIAKLADGFNAADLRNVCTEAGMFAIRAER 363
Query: 389 IHVTQEDFEMAVAKVMK-KETEKNMSLRKL 417
+V +EDF AV K + K+ E + +K+
Sbjct: 364 DYVMEEDFMKAVRKCQEAKKLEGKLDYQKV 393
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
Identities = 179/350 (51%), Positives = 234/350 (66%)
Query: 67 RVRMLKEE-LQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXP--- 122
R RM +E+ LQ+ + E K K+K ++ V K+VV
Sbjct: 88 RQRMAEEQPLQVARCTKIIQDE--KDSDKSKYVINVKQIAKFVVNLGERVSPTDIEEDLS 145
Query: 123 -STRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI 181
+ R+++ + Y + L LP K+DP V +M VE PD TY +GG +QI++++EV+E+P+
Sbjct: 146 HTDRLSVDRNKYQIMLPLPPKIDPSVTMMTVEDKPDVTYGDVGGCKEQIEKLREVVEMPL 205
Query: 182 KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR 241
PE F +LGI PKG LLYGPPGTGKTL ARAVA+ TD TFIRV GSELVQKY+GEG+R
Sbjct: 206 LSPERFVNLGIDPPKGALLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGAR 265
Query: 242 MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK 301
MVRELF MAR IIF DEID++G AR + G+G GD+EVQRTMLEL+ QLDGF+A
Sbjct: 266 MVRELFEMARTKKACIIFFDEIDAVGGARFDDGAG-GDNEVQRTMLELITQLDGFDARGN 324
Query: 302 IKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIA 361
IKV+ ATNR LD AL+RPGRIDRKIEF P+ E R +IL+IH++ M++ R I + I+
Sbjct: 325 IKVMFATNRPSTLDPALMRPGRIDRKIEFSLPDVEGRANILRIHAKSMSVERDIRWELIS 384
Query: 362 EKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKN 411
A+GAEL++V TEAGMFA+R RR T++DF AV KV+K + N
Sbjct: 385 RLCPNATGAELRSVATEAGMFAIRARRKVATEKDFLAAVDKVIKGNLKFN 434
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 812 (290.9 bits), Expect = 6.6e-81, P = 6.6e-81
Identities = 169/365 (46%), Positives = 236/365 (64%)
Query: 46 QVRQKTHNLNRLEAQ----RNEL-NSRVRMLKEE--LQLLQEPGSYVGEVVKVMGKNKVL 98
+ R+K N LE++ R L N++ K E L+ LQ G +GEV++ + + +
Sbjct: 18 EYRKKLLNCRELESRVSTVRENLKNAKKDFTKTEDDLKSLQSVGQIIGEVLRPLDNERFI 77
Query: 99 VKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDS 158
VK +YVV TRV L + + LP +VDP+V M E +
Sbjct: 78 VKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRTLPREVDPVVYNMLHEDPGNV 137
Query: 159 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 218
+Y +GGL QI+E++E IELP+ +PELF +GI PKGVLLYGPPGTGKTLLARA+A +
Sbjct: 138 SYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASN 197
Query: 219 TDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNG 278
D F+++ S ++ KYIGE +R++RE+F AR+H P IIFMDEID+IG R G+ +
Sbjct: 198 IDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGT-SA 256
Query: 279 DSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR 338
D E+QRT++ELLNQLDGF+ K+K++MATNR D+LD ALLRPGR+DRKIE P PNE++R
Sbjct: 257 DREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQAR 316
Query: 339 LDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEM 398
+++LKIH+ + ID + + + G +GA+L+ VCTEAGM A+R R +V EDF
Sbjct: 317 MEVLKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIRAERDYVVHEDFMK 376
Query: 399 AVAKV 403
AV K+
Sbjct: 377 AVRKL 381
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 785 (281.4 bits), Expect = 1.1e-80, Sum P(2) = 1.1e-80
Identities = 155/291 (53%), Positives = 210/291 (72%)
Query: 122 PSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI 181
P V + DSY++ LPS+ D V M+V++ P Y+ IGGL++QI+E+ E I LP+
Sbjct: 132 PGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPM 191
Query: 182 KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR 241
H E FE LG+ PKGVLLYGPPGTGKTL+ARA A T+ TF++++G +LVQ +IG+G++
Sbjct: 192 THKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 251
Query: 242 MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK 301
+VR+ F +A+E AP IIF+DEID+IG+ R +S +GD EVQRTMLELLNQLDGF + +
Sbjct: 252 LVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDER 310
Query: 302 IKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIA 361
IKV+ ATNR DILD AL+R GR+DRKIEFP+P EE+R IL+IHSR+MN+ ++ +++A
Sbjct: 311 IKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHPDVNFEELA 370
Query: 362 EKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVM-KKETEKN 411
+ +GA+LKAVC EAGM ALR V EDF + +V KK+ N
Sbjct: 371 RSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLN 421
Score = 44 (20.5 bits), Expect = 1.1e-80, Sum P(2) = 1.1e-80
Identities = 15/47 (31%), Positives = 28/47 (59%)
Query: 64 LNSRVRMLKEELQLLQ-EPGSYVGEVVKVMGKNKVLVKVHPEGKYVV 109
L++ +R+LKE+ Q E SY E +K +N+ +K++ + Y+V
Sbjct: 32 LDNEIRILKEDAQRTNLECDSYK-EKIK---ENQEKIKLNKQLPYLV 74
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 810 (290.2 bits), Expect = 1.1e-80, P = 1.1e-80
Identities = 171/386 (44%), Positives = 241/386 (62%)
Query: 33 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVM 92
R L+ LQ R+ L L +L + +++++ LQ G +GEV+K +
Sbjct: 4 RDTALEKYKSYLLQHREWDSKLKDLRFGNRDLVKKYDKTEDDIKSLQSVGQIIGEVLKQL 63
Query: 93 GKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKV 152
+ +VK +YVV RV+L + + ILP +VDPLV M +
Sbjct: 64 DSERFIVKASSGPRYVVGCRNNVDQSHLVQGVRVSLDMTTLTIMRILPREVDPLVYNMSI 123
Query: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
E D ++ +GGL++QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLA
Sbjct: 124 EDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLA 183
Query: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
RAVA F++V S +V KYIGE +R++RE+F A+EH P +IFMDEID+IG R
Sbjct: 184 RAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFS 243
Query: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
G+ + D E+QRT++ELLNQ+DGF+ + K++MATNR D LD ALLRPGR+DRKIE P
Sbjct: 244 EGT-SADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPL 302
Query: 333 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVT 392
PNE R++ILKIH +++ ID + + + +G +GA+L+ V TEAG A++E R +V
Sbjct: 303 PNEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVI 362
Query: 393 QEDFEMAVAKVMK-KETEKNMSLRKL 417
Q D A KV K+ E + +KL
Sbjct: 363 QSDLMSAARKVADLKKLEGTIDYQKL 388
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 785 (281.4 bits), Expect = 1.4e-80, Sum P(2) = 1.4e-80
Identities = 155/291 (53%), Positives = 212/291 (72%)
Query: 122 PSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI 181
P V + DSY++ LPS+ D V M+V++ P Y+ IGGL++QI+E+ E I LP+
Sbjct: 131 PGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPM 190
Query: 182 KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR 241
H E FE LGI PKGVLLYGPPGTGKTL+ARA A T+ TF++++G +LVQ +IG+G++
Sbjct: 191 THKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 250
Query: 242 MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK 301
+VR+ F++A+E +P IIF+DEID+IG+ R +S +GD EVQRTMLELLNQLDGF + ++
Sbjct: 251 LVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDS-EVSGDREVQRTMLELLNQLDGFSSDDR 309
Query: 302 IKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIA 361
IKV+ ATNR DILD AL+R GR+DRKIEFP+P EE+R IL+IHSR+MN+ ++ +++A
Sbjct: 310 IKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADVNFEELA 369
Query: 362 EKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVM-KKETEKN 411
+ +GA+LKAVC EAGM ALR V EDF + +V KK+ N
Sbjct: 370 RSTDDFNGAQLKAVCVEAGMLALRRDATEVNHEDFNEGIIQVQAKKKASLN 420
Score = 43 (20.2 bits), Expect = 1.4e-80, Sum P(2) = 1.4e-80
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 64 LNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVV 109
L + +R+LKEE Q V E +K +N+ +K++ + Y+V
Sbjct: 31 LANEIRILKEESQRTNLDLESVKEKIK---ENQEKIKLNKQLPYLV 73
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 808 (289.5 bits), Expect = 1.8e-80, P = 1.8e-80
Identities = 164/339 (48%), Positives = 229/339 (67%)
Query: 71 LKEELQLL-QEPGSYVGEVVKVMG----KNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTR 125
L+ + Q+L +E V K++ + K ++ V K+VV R
Sbjct: 67 LQLDKQMLNEEQPLQVARCTKIINADTDQTKYIINVKQIAKFVVGLGDKVAPSDIEEGMR 126
Query: 126 VALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPE 185
V + Y + ++LP K+DP V +M VE+ PD TY+ IGG +Q+++++EV+E+P+ PE
Sbjct: 127 VGVDRTKYKIQILLPPKIDPSVTMMTVEEKPDITYNDIGGCKEQLEKLREVVEMPLLQPE 186
Query: 186 LFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRE 245
F +LGI PKGVLLYGPPGTGKTL ARA+A+ TD FI V GSELVQKY+GEG+RMVRE
Sbjct: 187 RFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRTDACFICVIGSELVQKYVGEGARMVRE 246
Query: 246 LFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVL 305
LF MA+ I+F+DE+D+IG +R + S +GD EVQRTMLE++NQLDGF+ IKVL
Sbjct: 247 LFQMAKSKKACILFIDEVDAIGGSRGDE-SAHGDHEVQRTMLEIVNQLDGFDNRGNIKVL 305
Query: 306 MATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMN 365
MATNR D LD AL+RPGRIDR+IEF P+ E R I KIH+ MN+ R + + +A
Sbjct: 306 MATNRPDTLDSALVRPGRIDRRIEFSLPDLEGRTHIFKIHANTMNMSRDVRFELLARLCP 365
Query: 366 GASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVM 404
++G+++++VCTEAGMFA+R RR +T++D +A+ KV+
Sbjct: 366 NSTGSDIRSVCTEAGMFAIRARRKTITEKDLLLAINKVI 404
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 808 (289.5 bits), Expect = 1.8e-80, P = 1.8e-80
Identities = 164/339 (48%), Positives = 229/339 (67%)
Query: 71 LKEELQLL-QEPGSYVGEVVKVMG----KNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTR 125
L+ + Q+L +E V K++ + K ++ V K+VV R
Sbjct: 67 LQLDKQMLNEEQPLQVARCTKIINADTDQTKYIINVKQIAKFVVGLGDKVAPSDIEEGMR 126
Query: 126 VALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPE 185
V + Y + ++LP K+DP V +M VE+ PD TY+ IGG +Q+++++EV+E+P+ PE
Sbjct: 127 VGVDRTKYKIQILLPPKIDPSVTMMTVEEKPDITYNDIGGCKEQLEKLREVVEMPLLQPE 186
Query: 186 LFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRE 245
F +LGI PKGVLLYGPPGTGKTL ARA+A+ TD FI V GSELVQKY+GEG+RMVRE
Sbjct: 187 RFVTLGIDPPKGVLLYGPPGTGKTLTARAIANRTDACFICVIGSELVQKYVGEGARMVRE 246
Query: 246 LFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVL 305
LF MA+ I+F+DE+D+IG +R + S +GD EVQRTMLE++NQLDGF+ IKVL
Sbjct: 247 LFQMAKSKKACILFIDEVDAIGGSRGDE-SAHGDHEVQRTMLEIVNQLDGFDNRGNIKVL 305
Query: 306 MATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMN 365
MATNR D LD AL+RPGRIDR+IEF P+ E R I KIH+ MN+ R + + +A
Sbjct: 306 MATNRPDTLDSALVRPGRIDRRIEFSLPDLEGRTHIFKIHANTMNMSRDVRFELLARLCP 365
Query: 366 GASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVM 404
++G+++++VCTEAGMFA+R RR +T++D +A+ KV+
Sbjct: 366 NSTGSDIRSVCTEAGMFAIRARRKTITEKDLLLAINKVI 404
>UNIPROTKB|J3QQM1 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:AC015651 ChiTaRS:PSMC5
HGNC:HGNC:9552 Ensembl:ENST00000582130 Uniprot:J3QQM1
Length = 263
Score = 806 (288.8 bits), Expect = 2.9e-80, P = 2.9e-80
Identities = 167/235 (71%), Positives = 189/235 (80%)
Query: 63 ELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPE--GKYVVXXXXXXXXXXX 120
EL V + L+ LQ + + V+++ + L++ G+ V
Sbjct: 30 ELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKV 89
Query: 121 XPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELP 180
P+ RVALRNDSY LH ILP+KVDPLV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP
Sbjct: 90 TPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELP 149
Query: 181 IKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGS 240
+KHPELFE+LGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK+IGEG+
Sbjct: 150 VKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGA 209
Query: 241 RMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDG 295
RMVRELFVMAREHAPSIIFMDEIDSIGS+R+E GSG GDSEVQRTMLELLNQLDG
Sbjct: 210 RMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSG-GDSEVQRTMLELLNQLDG 263
Score = 275 (101.9 bits), Expect = 5.4e-24, P = 5.4e-24
Identities = 58/88 (65%), Positives = 68/88 (77%)
Query: 16 PEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEEL 75
PE++ +G K G GLRQYYL I ELQL V K+ NL RL+AQRNELN++VR+L+EEL
Sbjct: 6 PEQMELEEG--KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREEL 63
Query: 76 QLLQEPGSYVGEVVKVMGKNKVLVKVHP 103
QLLQE GSYVGEVV+ M K KVLVKV P
Sbjct: 64 QLLQEQGSYVGEVVRAMDKKKVLVKVTP 91
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 804 (288.1 bits), Expect = 4.7e-80, P = 4.7e-80
Identities = 167/358 (46%), Positives = 235/358 (65%)
Query: 57 LEAQRNELNSRVRMLKEELQLL-------QEPGSYVGEVVKVMGKNKVLVKVHPEGKYVV 109
L+ E+ R R+L E++LL +E G+ + + GK V +K Y +
Sbjct: 34 LKMSTEEIIQRTRLLDSEIKLLDVDPNDQEEDGANIDLDSQRKGKCAV-IKTSTRQTYFL 92
Query: 110 XXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQ 169
P V + DSY++ LP++ D V M+V++ P Y IGGLD+Q
Sbjct: 93 PVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQ 152
Query: 170 IKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGS 229
I+E+ E I LP+ H E FE+LGI PKGVL+YGPPGTGKTLLARA A T TF++++G
Sbjct: 153 IQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGP 212
Query: 230 ELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLEL 289
+LVQ +IG+G+++VR+ F +A+E APSIIF+DE+D+IG+ R +S GD EVQRTMLEL
Sbjct: 213 QLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKA-GDREVQRTMLEL 271
Query: 290 LNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRM 349
LNQLDGF+ + ++KV+ ATNR+DILD ALLR GR+DRKIEFP PNEE+R I++IHSR+M
Sbjct: 272 LNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKM 331
Query: 350 NLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 407
N+ ++ +++A + +GA+ KAVC EAGM ALR +T ED+ + +V K+
Sbjct: 332 NVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKK 389
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 767 (275.1 bits), Expect = 9.5e-80, Sum P(2) = 9.5e-80
Identities = 151/292 (51%), Positives = 214/292 (73%)
Query: 122 PSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI 181
P+ V + DSY++ LPS+ D V M+V++ P TY +GGLD+QI+E+ E I LP+
Sbjct: 142 PNDLVGVNKDSYLILDTLPSEFDSRVKAMEVDEKPTETYSDVGGLDKQIEELVEAIVLPM 201
Query: 182 KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR 241
K + F+ +GI PKG L+YGPPGTGKTLLARA A T+ TF++++ +LVQ YIGEG++
Sbjct: 202 KRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAK 261
Query: 242 MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK 301
+VR+ F +A+E AP+IIF+DE+D+IG+ R +S +GD EVQRTMLELLNQLDGF + ++
Sbjct: 262 LVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEK-SGDREVQRTMLELLNQLDGFSSDDR 320
Query: 302 IKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIA 361
+KVL ATNR+D+LD ALLR GR+DRKIEFP P+E+SR IL+IHSR+M I+ +++A
Sbjct: 321 VKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQILQIHSRKMTTDDDINWQELA 380
Query: 362 EKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMS 413
+ +GA+LKAV EAGM ALR + V EDF +++V +++ K++S
Sbjct: 381 RSTDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFVEGISEVQARKS-KSVS 431
Score = 53 (23.7 bits), Expect = 9.5e-80, Sum P(2) = 9.5e-80
Identities = 18/66 (27%), Positives = 34/66 (51%)
Query: 46 QVRQKTHNLNRLEAQRNE--LNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHP 103
++ Q+ NL+ E Q L++ +R+ + ELQ L + + E +K NK +K +
Sbjct: 17 ELDQEILNLSTQELQTRAKLLDNEIRIFRSELQRLSHENNVMLEKIK---DNKEKIKNNR 73
Query: 104 EGKYVV 109
+ Y+V
Sbjct: 74 QLPYLV 79
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
Identities = 166/379 (43%), Positives = 243/379 (64%)
Query: 32 LRQYYLQHIHELQLQVRQKTHNLNRLEAQRNE---LNSRVRMLKEELQLLQEPGSYVGEV 88
++ L+ HELQ + N +++ + +++ + +L + +E G+ +
Sbjct: 55 MKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLD 114
Query: 89 VKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVN 148
+ GK V +K Y + P V + DSY++ LP++ D V
Sbjct: 115 SQRKGKCAV-IKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVK 173
Query: 149 LMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 208
M+V++ P Y IGGLD+QI+E+ E I LP+ H E FE+LGI PKGVL+YGPPGTGK
Sbjct: 174 AMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGK 233
Query: 209 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 268
TLLARA A T TF++++G +LVQ +IG+G+++VR+ F +A+E APSIIF+DE+D+IG+
Sbjct: 234 TLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGT 293
Query: 269 ARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKI 328
R +S GD EVQRTMLELLNQLDGF+ + ++KV+ ATNR+DILD ALLR GR+DRKI
Sbjct: 294 KRFDSEKA-GDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKI 352
Query: 329 EFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR 388
EFP PNEE+R I++IHSR+MN+ ++ +++A + +GA+ KAVC EAGM ALR
Sbjct: 353 EFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA 412
Query: 389 IHVTQEDFEMAVAKVMKKE 407
+T ED+ + +V K+
Sbjct: 413 TELTHEDYMEGILEVQAKK 431
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
Identities = 166/379 (43%), Positives = 243/379 (64%)
Query: 32 LRQYYLQHIHELQLQVRQKTHNLNRLEAQRNE---LNSRVRMLKEELQLLQEPGSYVGEV 88
++ L+ HELQ + N +++ + +++ + +L + +E G+ +
Sbjct: 55 MKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLD 114
Query: 89 VKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVN 148
+ GK V +K Y + P V + DSY++ LP++ D V
Sbjct: 115 SQRKGKCAV-IKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVK 173
Query: 149 LMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 208
M+V++ P Y IGGLD+QI+E+ E I LP+ H E FE+LGI PKGVL+YGPPGTGK
Sbjct: 174 AMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGK 233
Query: 209 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 268
TLLARA A T TF++++G +LVQ +IG+G+++VR+ F +A+E APSIIF+DE+D+IG+
Sbjct: 234 TLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGT 293
Query: 269 ARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKI 328
R +S GD EVQRTMLELLNQLDGF+ + ++KV+ ATNR+DILD ALLR GR+DRKI
Sbjct: 294 KRFDSEKA-GDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKI 352
Query: 329 EFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR 388
EFP PNEE+R I++IHSR+MN+ ++ +++A + +GA+ KAVC EAGM ALR
Sbjct: 353 EFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA 412
Query: 389 IHVTQEDFEMAVAKVMKKE 407
+T ED+ + +V K+
Sbjct: 413 TELTHEDYMEGILEVQAKK 431
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
Identities = 166/379 (43%), Positives = 243/379 (64%)
Query: 32 LRQYYLQHIHELQLQVRQKTHNLNRLEAQRNE---LNSRVRMLKEELQLLQEPGSYVGEV 88
++ L+ HELQ + N +++ + +++ + +L + +E G+ +
Sbjct: 62 MKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLD 121
Query: 89 VKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVN 148
+ GK V +K Y + P V + DSY++ LP++ D V
Sbjct: 122 SQRKGKCAV-IKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVK 180
Query: 149 LMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 208
M+V++ P Y IGGLD+QI+E+ E I LP+ H E FE+LGI PKGVL+YGPPGTGK
Sbjct: 181 AMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGK 240
Query: 209 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 268
TLLARA A T TF++++G +LVQ +IG+G+++VR+ F +A+E APSIIF+DE+D+IG+
Sbjct: 241 TLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGT 300
Query: 269 ARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKI 328
R +S GD EVQRTMLELLNQLDGF+ + ++KV+ ATNR+DILD ALLR GR+DRKI
Sbjct: 301 KRFDSEKA-GDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKI 359
Query: 329 EFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR 388
EFP PNEE+R I++IHSR+MN+ ++ +++A + +GA+ KAVC EAGM ALR
Sbjct: 360 EFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA 419
Query: 389 IHVTQEDFEMAVAKVMKKE 407
+T ED+ + +V K+
Sbjct: 420 TELTHEDYMEGILEVQAKK 438
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
Identities = 166/379 (43%), Positives = 243/379 (64%)
Query: 32 LRQYYLQHIHELQLQVRQKTHNLNRLEAQRNE---LNSRVRMLKEELQLLQEPGSYVGEV 88
++ L+ HELQ + N +++ + +++ + +L + +E G+ +
Sbjct: 58 MKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLD 117
Query: 89 VKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVN 148
+ GK V +K Y + P V + DSY++ LP++ D V
Sbjct: 118 SQRKGKCAV-IKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVK 176
Query: 149 LMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 208
M+V++ P Y IGGLD+QI+E+ E I LP+ H E FE+LGI PKGVL+YGPPGTGK
Sbjct: 177 AMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGK 236
Query: 209 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 268
TLLARA A T TF++++G +LVQ +IG+G+++VR+ F +A+E APSIIF+DE+D+IG+
Sbjct: 237 TLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGT 296
Query: 269 ARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKI 328
R +S GD EVQRTMLELLNQLDGF+ + ++KV+ ATNR+DILD ALLR GR+DRKI
Sbjct: 297 KRFDSEKA-GDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKI 355
Query: 329 EFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR 388
EFP PNEE+R I++IHSR+MN+ ++ +++A + +GA+ KAVC EAGM ALR
Sbjct: 356 EFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA 415
Query: 389 IHVTQEDFEMAVAKVMKKE 407
+T ED+ + +V K+
Sbjct: 416 TELTHEDYMEGILEVQAKK 434
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
Identities = 166/379 (43%), Positives = 243/379 (64%)
Query: 32 LRQYYLQHIHELQLQVRQKTHNLNRLEAQRNE---LNSRVRMLKEELQLLQEPGSYVGEV 88
++ L+ HELQ + N +++ + +++ + +L + +E G+ +
Sbjct: 55 MKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLD 114
Query: 89 VKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVN 148
+ GK V +K Y + P V + DSY++ LP++ D V
Sbjct: 115 SQRKGKCAV-IKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVK 173
Query: 149 LMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 208
M+V++ P Y IGGLD+QI+E+ E I LP+ H E FE+LGI PKGVL+YGPPGTGK
Sbjct: 174 AMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGK 233
Query: 209 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 268
TLLARA A T TF++++G +LVQ +IG+G+++VR+ F +A+E APSIIF+DE+D+IG+
Sbjct: 234 TLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGT 293
Query: 269 ARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKI 328
R +S GD EVQRTMLELLNQLDGF+ + ++KV+ ATNR+DILD ALLR GR+DRKI
Sbjct: 294 KRFDSEKA-GDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKI 352
Query: 329 EFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR 388
EFP PNEE+R I++IHSR+MN+ ++ +++A + +GA+ KAVC EAGM ALR
Sbjct: 353 EFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA 412
Query: 389 IHVTQEDFEMAVAKVMKKE 407
+T ED+ + +V K+
Sbjct: 413 TELTHEDYMEGILEVQAKK 431
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
Identities = 166/379 (43%), Positives = 243/379 (64%)
Query: 32 LRQYYLQHIHELQLQVRQKTHNLNRLEAQRNE---LNSRVRMLKEELQLLQEPGSYVGEV 88
++ L+ HELQ + N +++ + +++ + +L + +E G+ +
Sbjct: 58 MKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLD 117
Query: 89 VKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVN 148
+ GK V +K Y + P V + DSY++ LP++ D V
Sbjct: 118 SQRKGKCAV-IKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVK 176
Query: 149 LMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 208
M+V++ P Y IGGLD+QI+E+ E I LP+ H E FE+LGI PKGVL+YGPPGTGK
Sbjct: 177 AMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGK 236
Query: 209 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 268
TLLARA A T TF++++G +LVQ +IG+G+++VR+ F +A+E APSIIF+DE+D+IG+
Sbjct: 237 TLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGT 296
Query: 269 ARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKI 328
R +S GD EVQRTMLELLNQLDGF+ + ++KV+ ATNR+DILD ALLR GR+DRKI
Sbjct: 297 KRFDSEKA-GDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKI 355
Query: 329 EFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR 388
EFP PNEE+R I++IHSR+MN+ ++ +++A + +GA+ KAVC EAGM ALR
Sbjct: 356 EFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGA 415
Query: 389 IHVTQEDFEMAVAKVMKKE 407
+T ED+ + +V K+
Sbjct: 416 TELTHEDYMEGILEVQAKK 434
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 796 (285.3 bits), Expect = 3.3e-79, P = 3.3e-79
Identities = 169/378 (44%), Positives = 240/378 (63%)
Query: 32 LRQYYLQHIHELQLQVRQKTHNLNRLEAQRN--ELNSRVRMLKEELQLLQEPGSYVGEVV 89
++ L+ HELQ + N +++ + L S V + QE G +G +
Sbjct: 3 MKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIEERSVHHFCQE-GEGIGSPL 61
Query: 90 KVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNL 149
V+G V+ Y + P V + DSY++ LP++ D V
Sbjct: 62 -VIGDMARCQTVYDSETYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKA 120
Query: 150 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 209
M+V++ P Y IGGLD+QI+E+ E I LP+ H E FE+LGI PKGVL+YGPPGTGKT
Sbjct: 121 MEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKT 180
Query: 210 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 269
LLARA A T TF++++G +LVQ +IG+G+++VR+ F +A+E APSIIF+DE+D+IG+
Sbjct: 181 LLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTK 240
Query: 270 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 329
R +S GD EVQRTMLELLNQLDGF+ + ++KV+ ATNR+DILD ALLR GR+DRKIE
Sbjct: 241 RFDSEKA-GDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIE 299
Query: 330 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 389
FP PNEE+R I++IHSR+MN+ ++ +++A + +GA+ KAVC EAGM ALR
Sbjct: 300 FPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGAT 359
Query: 390 HVTQEDFEMAVAKVMKKE 407
+T ED+ + +V K+
Sbjct: 360 ELTHEDYMEGILEVQAKK 377
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 172/414 (41%), Positives = 252/414 (60%)
Query: 7 ETKQPESAAPEEVCAAKGA-SKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELN 65
ET++ P V + A +K ++ L+H Q++Q+ N+ LE +L
Sbjct: 34 ETEEHHEEEPSRVDPEQEAHNKALNQFKRKLLEH-RRYDDQLKQRRQNIRDLE----KLY 88
Query: 66 SRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTR 125
+ + +++ LQ G +GEV+K + + K +VK +Y+V R
Sbjct: 89 DKT---ENDIKALQSIGQLIGEVMKELSEEKYIVKASSGPRYIVGVRNSVDRSKLKKGVR 145
Query: 126 VALRNDSYVLHLILPSKVDPLV-NLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHP 184
V L + + ILP + DPLV N+ E+ + T+D IGGL +QI+E++EVIELP+K+P
Sbjct: 146 VTLDITTLTIMRILPRETDPLVYNMTSFEQ-GEITFDGIGGLTEQIRELREVIELPLKNP 204
Query: 185 ELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVR 244
E+F+ +GI PKGVLLYGPPGTGKTLLA+AVA FI S +V KYIGE +R++R
Sbjct: 205 EIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIR 264
Query: 245 ELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKV 304
E+F A+EH P IIFMDE+D+IG R G+ + D E+QRT++ELL Q+DGF+ + K+
Sbjct: 265 EMFAYAKEHEPCIIFMDEVDAIGGRRFSEGT-SADREIQRTLMELLTQMDGFDNLGQTKI 323
Query: 305 LMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKM 364
+MATNR D LD ALLRPGR+DRK+E P PNE RL+I KIH+ ++ D + +
Sbjct: 324 IMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMS 383
Query: 365 NGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK-KETEKNMSLRKL 417
+G +GA+++ TEAG FA+R+ R H+ +D AV KV + K+ E + +KL
Sbjct: 384 DGFNGADIRNCATEAGFFAIRDDRDHINPDDLMKAVRKVAEVKKLEGTIEYQKL 437
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 165/379 (43%), Positives = 242/379 (63%)
Query: 32 LRQYYLQHIHELQLQVRQKTHNLNRLEAQRNE---LNSRVRMLKEELQLLQEPGSYVGEV 88
++ L+ HELQ + N +++ + +++ + +L +E G+ +
Sbjct: 50 MKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVHPNDQEEDGANIDLD 109
Query: 89 VKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVN 148
+ GK V +K Y + P V + DSY++ LP++ D V
Sbjct: 110 SQRKGKCAV-IKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVK 168
Query: 149 LMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 208
M+V++ P Y IGGLD+QI+E+ E I LP+ H E FE+LGI PKGVL+YGPPGTGK
Sbjct: 169 AMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGK 228
Query: 209 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 268
TLLARA A T TF++++G +LVQ +IG+G+++VR+ F +A+E APSIIF+DE+D+ G+
Sbjct: 229 TLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDATGT 288
Query: 269 ARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKI 328
R +S GD EVQRTMLELLNQLDGF+ + ++KV+ ATNR+DILD ALLR GR+D+KI
Sbjct: 289 KRFDSEKA-GDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDQKI 347
Query: 329 EFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR 388
EFP PNEE+R I++IHSR+MN+ ++ +++A M+ +GA+ KAVC EAGM ALR
Sbjct: 348 EFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCMDDFNGAQCKAVCVEAGMIALRRGT 407
Query: 389 IHVTQEDFEMAVAKVMKKE 407
+T ED+ + +V K+
Sbjct: 408 TELTHEDYMEGILEVQAKK 426
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 792 (283.9 bits), Expect = 8.7e-79, P = 8.7e-79
Identities = 165/379 (43%), Positives = 242/379 (63%)
Query: 32 LRQYYLQHIHELQLQVRQKTHNLNRLEAQRNE---LNSRVRMLKEELQLLQEPGSYVGEV 88
++ L+ HELQ + N +++ + +++ + +L + +E G+ +
Sbjct: 43 MKSEVLRVTHELQAMKDKIKENTEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLD 102
Query: 89 VKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVN 148
+ GK V +K Y + P V + DSY++ LP++ D V
Sbjct: 103 SQRKGKCAV-IKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVK 161
Query: 149 LMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 208
M+V++ P Y IGGLD+QI+E+ E I LP+ H E FE+LGI PKGVL+YGPPGTGK
Sbjct: 162 AMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGK 221
Query: 209 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 268
TLLARA A T TF++++G +LVQ +IG+G+++VR+ F +A+E APSIIF+DE+D+IG+
Sbjct: 222 TLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGT 281
Query: 269 ARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKI 328
R +S GD EVQRTMLELLNQLDGF+ + ++KV+ ATNR+DILD ALLR GR+DRKI
Sbjct: 282 KRFDSEKA-GDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKI 340
Query: 329 EFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR 388
EFP PNEE+R I++IHSR+MN+ ++ +++A + +GA+ KAVC EAGM ALR
Sbjct: 341 EFPMPNEEARARIMQIHSRKMNVCPDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRGA 400
Query: 389 IHVTQEDFEMAVAKVMKKE 407
+ ED+ + +V K+
Sbjct: 401 TELNHEDYMEGILEVQAKK 419
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 160/379 (42%), Positives = 241/379 (63%)
Query: 40 IHELQLQVRQKTHNLNRLEAQRNELNSRVRMLK-------EELQLLQEPGSYVGEVVKVM 92
+ +L ++ ++ L +E Q + R LK EE++ +Q +G+ ++ +
Sbjct: 32 MEDLYVRYKKLQKTLEFIEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAV 91
Query: 93 GKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKV 152
+N +V Y V PS VAL S L +LP + D +++++
Sbjct: 92 DQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQP 151
Query: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
++ PD +Y IGG+D Q +EI+E +ELP+ H EL++ +GI P+GVL+YGPPG GKT+LA
Sbjct: 152 DEKPDVSYADIGGMDMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLA 211
Query: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
+AVAHHT +FIRV GSE VQKY+GEG RMVR++F +A+E+AP+IIF+DEID+I + R +
Sbjct: 212 KAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFD 271
Query: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
+ +G D EVQR +LELLNQ+DGF+ + +KV+MATNR D LD ALLRPGR+DRKIEFP
Sbjct: 272 AQTG-ADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPL 330
Query: 333 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVT 392
P+ + + + +MNL +DL++ + + SGA++ A+C EAGM A+RE R V
Sbjct: 331 PDRRQKRLVFSTITSKMNLSEDVDLEEFVARPDKISGADINAICQEAGMHAVRENRYIVL 390
Query: 393 QEDFEMAVAKVMKKETEKN 411
+DFE +KK+ +++
Sbjct: 391 AKDFEKGYKNNIKKDEQEH 409
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 165/379 (43%), Positives = 243/379 (64%)
Query: 32 LRQYYLQHIHELQLQVRQKTHNLNRLEAQRNE---LNSRVRMLKEELQLLQEPGSYVGEV 88
++ L+ HELQ + N +++ + +++ + +L + +E G+ +
Sbjct: 20 MKSEVLRVTHELQAMRDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLD 79
Query: 89 VKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVN 148
+ GK V +K Y + P V + DSY++ LP++ D V
Sbjct: 80 SQRKGKCAV-IKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVK 138
Query: 149 LMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 208
M+V++ P Y IGGLD+QI+E+ E I LP+ H E FE+LGI PKGVL+YGPPGTGK
Sbjct: 139 AMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGK 198
Query: 209 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 268
TLLARA A T TF++++G +LVQ +IG+G+++VR+ F +A+E APSIIF+DE+D+IG+
Sbjct: 199 TLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGN 258
Query: 269 ARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKI 328
R +S GD EVQRTMLELLNQLDGF+ + ++KV+ ATNR+DILD ALLR GR+DRKI
Sbjct: 259 KRFDSEKA-GDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKI 317
Query: 329 EFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR 388
EFP PNEE+R I++IHSR+MN+ ++ +++A + +GA+ KAVC EAG+ ALR
Sbjct: 318 EFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALRRGA 377
Query: 389 IHVTQEDFEMAVAKVMKKE 407
+T ED+ + +V K+
Sbjct: 378 TELTHEDYMEGILEVQAKK 396
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 788 (282.4 bits), Expect = 2.3e-78, P = 2.3e-78
Identities = 152/267 (56%), Positives = 198/267 (74%)
Query: 138 ILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKG 197
+L K+D KVEK P T+D IGG + QI+E+KE +ELP+ HPE +E +GI PKG
Sbjct: 160 VLDDKIDSNAMGHKVEKTPKETFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKG 219
Query: 198 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 257
V+LYG PGTGKTLLA+AVA+ T TFIR +GS+LVQK GEG+R+VR++F MA+E APSI
Sbjct: 220 VILYGEPGTGKTLLAKAVANSTSATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSI 279
Query: 258 IFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQA 317
+F+DEID++G+ R ++ S G+ EVQRT+LELLNQLDGFE+ +K++MATNRID LD A
Sbjct: 280 VFIDEIDAVGTKRFDTSS-RGEQEVQRTLLELLNQLDGFESRGDVKIIMATNRIDSLDPA 338
Query: 318 LLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCT 377
L+RPGRIDRKIE P P+E++R I IH+ M + + + + + K SGAE+KAVCT
Sbjct: 339 LIRPGRIDRKIELPKPDEKTRQKIFTIHTSGMTIQKAVTYENVLGKEKSISGAEIKAVCT 398
Query: 378 EAGMFALRERRIHVTQEDFEMAVAKVM 404
EAGM ALR +R V +DFE AV VM
Sbjct: 399 EAGMLALRAQRKCVGTDDFEKAVKSVM 425
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 786 (281.7 bits), Expect = 3.8e-78, P = 3.8e-78
Identities = 166/387 (42%), Positives = 245/387 (63%)
Query: 32 LRQYYLQHIHELQLQVRQKTHNLNRLEAQRNE---LNSRVRMLKEELQL-LQEPGSYVGE 87
++ Y + HE + N ++E R + + V +L +++ E G+ +
Sbjct: 79 MKSEYQRLTHEQNTMKEKVKDNQEKIENNRQLPYLVGNVVELLDLDVEAEAAEEGANIDL 138
Query: 88 VVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLV 147
+GK+ V +K + P + + DSY++ LP++ D V
Sbjct: 139 DATRVGKSAV-IKTSTRQTIYLPLIGLVDHEKLKPGDLIGVNKDSYLILDTLPAEYDNRV 197
Query: 148 NLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTG 207
M+V++ P Y IGGLD+QI+EI E I P+K E F+ LGI PKG L+YGPPGTG
Sbjct: 198 KAMEVDEKPTEKYTDIGGLDKQIEEIVEAIVWPMKEAERFKKLGIKAPKGALMYGPPGTG 257
Query: 208 KTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIG 267
KTLLARA A T+ TF++++G +LVQ +IG+G+++VR+ F +A+E APSIIF+DE+D++G
Sbjct: 258 KTLLARACAAETNATFLKLAGPQLVQMFIGDGAKLVRDCFALAKEKAPSIIFIDELDAVG 317
Query: 268 SARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRK 327
+ R +S +GD EVQRTMLELLNQLDGF + ++IKVL ATNR+D+LD ALLR GR+DRK
Sbjct: 318 TKRFDSEK-SGDREVQRTMLELLNQLDGFASDDRIKVLAATNRVDVLDPALLRSGRLDRK 376
Query: 328 IEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRER 387
IEFP PNEE+R +IL+IHSR+M + ++ ++A + GA+LKAVC EAGM ALR+
Sbjct: 377 IEFPLPNEEARANILQIHSRKMTVEDSVNWAELARSTDEFGGAQLKAVCVEAGMIALRKG 436
Query: 388 RIHVTQEDFEMAVAKVMKKETEKNMSL 414
+ E++ A+A+V K+ + NM +
Sbjct: 437 HSKIGHENYVDAIAEVQAKKKDTNMGI 463
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 152/286 (53%), Positives = 209/286 (73%)
Query: 122 PSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI 181
P V + DSY++ LP++ D V M+V++ P Y IGGLD+QI+E+ E I LP+
Sbjct: 97 PGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPM 156
Query: 182 KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR 241
H E FE+LGI PKGVL+YGPPGTGKTLLARA A T TF++++G +LVQ +IG+G++
Sbjct: 157 NHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAK 216
Query: 242 MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK 301
+VR+ F +A+E APSIIF+DE+D+IG+ R +S GD EVQRTMLELLNQLDGF+ + +
Sbjct: 217 LVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKA-GDREVQRTMLELLNQLDGFQPNTQ 275
Query: 302 IKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIA 361
+KV+ ATNR+DILD ALLR GR+DRKIEFP PNEE+R I++IHSR+MN+ ++ +++A
Sbjct: 276 VKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELA 335
Query: 362 EKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 407
+ +GA+ KAVC EAGM ALR +T ED+ + +V K+
Sbjct: 336 RCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKK 381
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 782 (280.3 bits), Expect = 1.0e-77, P = 1.0e-77
Identities = 166/375 (44%), Positives = 237/375 (63%)
Query: 42 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVM-----GKNK 96
E + +V + H LE + + R++ ++LQ+ + V VV+++ G+ +
Sbjct: 42 ENETKVLRSEHISKHLEM--DSIQKRIKENNDKLQVNTQLPHLVANVVEIIDMVLDGETQ 99
Query: 97 ----VLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKV 152
V+VK + P V + DSY++ LP + D V M++
Sbjct: 100 PSKCVVVKASTRQTIFLAYPGIVDVDKLRPGDLVGINKDSYIILDTLPPEYDSRVKAMEI 159
Query: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
++ P Y IGGLD+QI+E+ E + LP+ H E FES+GI PKGVL+YGPPGTGKTLLA
Sbjct: 160 DEKPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLA 219
Query: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
RA A T+ T+++++G +LVQ +IG+G+++VR+ F +A+E P+IIF+DE+D+IG+ R +
Sbjct: 220 RACAAQTNSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTKRFD 279
Query: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
S +GD EVQRTMLELLNQLDGF + IKV+ ATNRIDILD ALLR GR+DRKIEFP
Sbjct: 280 S-EVSGDREVQRTMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDRKIEFPL 338
Query: 333 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVT 392
PNEE+R IL+IHSR+MN+ ++ ++A +GA+LKAVC EAGM ALR +
Sbjct: 339 PNEEARAHILQIHSRKMNVSADVNFDELARSSEDFNGAQLKAVCVEAGMIALRRGGTELI 398
Query: 393 QEDFEMAVAKVMKKE 407
DF +VM K+
Sbjct: 399 HNDFVEGCVEVMAKK 413
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
Identities = 168/415 (40%), Positives = 250/415 (60%)
Query: 1 MAAVGI--ETKQPESAAPEEVCAAKGASKQGE--GLRQYYLQHIHELQLQVRQKTHNLNR 56
M +GI E Q E A G S GE L Y ++ +LQ ++
Sbjct: 1 MEEIGILVEKAQDEIPALSVSRPQTGLSFLGEPEDLEDLYSRY-KKLQQELEFLEVQEEY 59
Query: 57 LEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXX 116
++ ++ L +EE++ +Q +G+ ++ + +N +V Y V
Sbjct: 60 IKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTID 119
Query: 117 XXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEV 176
P+ VAL S L +LP + D + ++ ++ PD Y IGG+D Q +E++E
Sbjct: 120 RELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREA 179
Query: 177 IELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYI 236
+ELP+ H EL++ +GI P+GVL+YGPPG GKT+LA+AVAHHT FIRV GSE VQKY+
Sbjct: 180 VELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYL 239
Query: 237 GEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGF 296
GEG RMVR++F +A+E+AP+IIF+DEID+I + R ++ +G D EVQR +LELLNQ+DGF
Sbjct: 240 GEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTG-ADREVQRILLELLNQMDGF 298
Query: 297 EASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGID 356
+ + +KV+MATNR D LD ALLRPGR+DRKIEFP P+ + I + +MNL +D
Sbjct: 299 DQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVD 358
Query: 357 LKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKN 411
L+ + + SGA++ ++C E+GM A+RE R V +DFE A V+KK+ +++
Sbjct: 359 LEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEH 413
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 777 (278.6 bits), Expect = 3.4e-77, P = 3.4e-77
Identities = 157/353 (44%), Positives = 232/353 (65%)
Query: 58 EAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXX 117
+ Q+N L + +EE++ +Q +G+ ++++ +N +V Y V
Sbjct: 53 DEQKN-LKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINR 111
Query: 118 XXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVI 177
PS VAL S L +LP + D ++L+ + PD +Y+ IGG D Q +EI+E +
Sbjct: 112 ELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEIREAV 171
Query: 178 ELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIG 237
ELP+ H EL++ +GI P+GVLLYGPPGTGKT+LA+AVA+HT FIRV GSE VQKY+G
Sbjct: 172 ELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLG 231
Query: 238 EGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFE 297
EG RMVR++F +A+E+AP+IIF+DE+D+I +AR ++ +G D EVQR ++ELLNQ+DGF+
Sbjct: 232 EGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTG-ADREVQRILMELLNQMDGFD 290
Query: 298 ASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDL 357
+ +KV+MATNR D LD ALLRPGR+DRKIEFP P+ + + ++ + +MNL +DL
Sbjct: 291 QTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDL 350
Query: 358 KKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAV-AKVMKKETE 409
+ + + S AE+ A+C EAGM A+R+ R + +DFE A V K +T+
Sbjct: 351 EDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRANVKKPDTD 403
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 159/381 (41%), Positives = 238/381 (62%)
Query: 38 QHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLK-------EELQLLQEPGSYVGEVVK 90
+ + +L + ++ L LE Q + + LK EE++ +Q +G+ ++
Sbjct: 35 EDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLE 94
Query: 91 VMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLM 150
+ +N +V Y V P+ VAL S L +LP + D + ++
Sbjct: 95 AVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMML 154
Query: 151 KVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTL 210
++ PD Y IGG+D Q +E++E +ELP+ H EL++ +GI P+GVL+YGPPG GKT+
Sbjct: 155 TSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTM 214
Query: 211 LARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSAR 270
LA+AVAHHT FIRV GSE VQKY+GEG RMVR++F +A+E+AP+IIF+DEID+I + R
Sbjct: 215 LAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR 274
Query: 271 MESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEF 330
++ +G D EVQR +LELLNQ+DGF+ + +KV+MATNR D LD ALLRPGR+DRKIEF
Sbjct: 275 FDAQTG-ADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEF 333
Query: 331 PNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIH 390
P P+ + I + +MNL +DL+ + + SGA++ ++C E+GM A+RE R
Sbjct: 334 PLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYI 393
Query: 391 VTQEDFEMAVAKVMKKETEKN 411
V +DFE A V+KK+ +++
Sbjct: 394 VLAKDFEKAYKTVIKKDEQEH 414
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 159/381 (41%), Positives = 238/381 (62%)
Query: 38 QHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLK-------EELQLLQEPGSYVGEVVK 90
+ + +L + ++ L LE Q + + LK EE++ +Q +G+ ++
Sbjct: 35 EDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLE 94
Query: 91 VMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLM 150
+ +N +V Y V P+ VAL S L +LP + D + ++
Sbjct: 95 AVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMML 154
Query: 151 KVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTL 210
++ PD Y IGG+D Q +E++E +ELP+ H EL++ +GI P+GVL+YGPPG GKT+
Sbjct: 155 TSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTM 214
Query: 211 LARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSAR 270
LA+AVAHHT FIRV GSE VQKY+GEG RMVR++F +A+E+AP+IIF+DEID+I + R
Sbjct: 215 LAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR 274
Query: 271 MESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEF 330
++ +G D EVQR +LELLNQ+DGF+ + +KV+MATNR D LD ALLRPGR+DRKIEF
Sbjct: 275 FDAQTG-ADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEF 333
Query: 331 PNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIH 390
P P+ + I + +MNL +DL+ + + SGA++ ++C E+GM A+RE R
Sbjct: 334 PLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYI 393
Query: 391 VTQEDFEMAVAKVMKKETEKN 411
V +DFE A V+KK+ +++
Sbjct: 394 VLAKDFEKAYKTVIKKDEQEH 414
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 159/381 (41%), Positives = 238/381 (62%)
Query: 38 QHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLK-------EELQLLQEPGSYVGEVVK 90
+ + +L + ++ L LE Q + + LK EE++ +Q +G+ ++
Sbjct: 35 EDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLE 94
Query: 91 VMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLM 150
+ +N +V Y V P+ VAL S L +LP + D + ++
Sbjct: 95 AVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMML 154
Query: 151 KVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTL 210
++ PD Y IGG+D Q +E++E +ELP+ H EL++ +GI P+GVL+YGPPG GKT+
Sbjct: 155 TSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTM 214
Query: 211 LARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSAR 270
LA+AVAHHT FIRV GSE VQKY+GEG RMVR++F +A+E+AP+IIF+DEID+I + R
Sbjct: 215 LAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR 274
Query: 271 MESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEF 330
++ +G D EVQR +LELLNQ+DGF+ + +KV+MATNR D LD ALLRPGR+DRKIEF
Sbjct: 275 FDAQTG-ADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEF 333
Query: 331 PNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIH 390
P P+ + I + +MNL +DL+ + + SGA++ ++C E+GM A+RE R
Sbjct: 334 PLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYI 393
Query: 391 VTQEDFEMAVAKVMKKETEKN 411
V +DFE A V+KK+ +++
Sbjct: 394 VLAKDFEKAYKTVIKKDEQEH 414
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 159/381 (41%), Positives = 238/381 (62%)
Query: 38 QHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLK-------EELQLLQEPGSYVGEVVK 90
+ + +L + ++ L LE Q + + LK EE++ +Q +G+ ++
Sbjct: 35 EDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLE 94
Query: 91 VMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLM 150
+ +N +V Y V P+ VAL S L +LP + D + ++
Sbjct: 95 AVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMML 154
Query: 151 KVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTL 210
++ PD Y IGG+D Q +E++E +ELP+ H EL++ +GI P+GVL+YGPPG GKT+
Sbjct: 155 TSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTM 214
Query: 211 LARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSAR 270
LA+AVAHHT FIRV GSE VQKY+GEG RMVR++F +A+E+AP+IIF+DEID+I + R
Sbjct: 215 LAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR 274
Query: 271 MESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEF 330
++ +G D EVQR +LELLNQ+DGF+ + +KV+MATNR D LD ALLRPGR+DRKIEF
Sbjct: 275 FDAQTG-ADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEF 333
Query: 331 PNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIH 390
P P+ + I + +MNL +DL+ + + SGA++ ++C E+GM A+RE R
Sbjct: 334 PLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYI 393
Query: 391 VTQEDFEMAVAKVMKKETEKN 411
V +DFE A V+KK+ +++
Sbjct: 394 VLAKDFEKAYKTVIKKDEQEH 414
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 159/381 (41%), Positives = 238/381 (62%)
Query: 38 QHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLK-------EELQLLQEPGSYVGEVVK 90
+ + +L + ++ L LE Q + + LK EE++ +Q +G+ ++
Sbjct: 35 EDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLE 94
Query: 91 VMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLM 150
+ +N +V Y V P+ VAL S L +LP + D + ++
Sbjct: 95 AVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMML 154
Query: 151 KVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTL 210
++ PD Y IGG+D Q +E++E +ELP+ H EL++ +GI P+GVL+YGPPG GKT+
Sbjct: 155 TSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTM 214
Query: 211 LARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSAR 270
LA+AVAHHT FIRV GSE VQKY+GEG RMVR++F +A+E+AP+IIF+DEID+I + R
Sbjct: 215 LAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR 274
Query: 271 MESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEF 330
++ +G D EVQR +LELLNQ+DGF+ + +KV+MATNR D LD ALLRPGR+DRKIEF
Sbjct: 275 FDAQTG-ADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEF 333
Query: 331 PNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIH 390
P P+ + I + +MNL +DL+ + + SGA++ ++C E+GM A+RE R
Sbjct: 334 PLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYI 393
Query: 391 VTQEDFEMAVAKVMKKETEKN 411
V +DFE A V+KK+ +++
Sbjct: 394 VLAKDFEKAYKTVIKKDEQEH 414
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 159/381 (41%), Positives = 238/381 (62%)
Query: 38 QHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLK-------EELQLLQEPGSYVGEVVK 90
+ + +L + ++ L LE Q + + LK EE++ +Q +G+ ++
Sbjct: 35 EDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLE 94
Query: 91 VMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLM 150
+ +N +V Y V P+ VAL S L +LP + D + ++
Sbjct: 95 AVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMML 154
Query: 151 KVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTL 210
++ PD Y IGG+D Q +E++E +ELP+ H EL++ +GI P+GVL+YGPPG GKT+
Sbjct: 155 TSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTM 214
Query: 211 LARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSAR 270
LA+AVAHHT FIRV GSE VQKY+GEG RMVR++F +A+E+AP+IIF+DEID+I + R
Sbjct: 215 LAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR 274
Query: 271 MESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEF 330
++ +G D EVQR +LELLNQ+DGF+ + +KV+MATNR D LD ALLRPGR+DRKIEF
Sbjct: 275 FDAQTG-ADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEF 333
Query: 331 PNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIH 390
P P+ + I + +MNL +DL+ + + SGA++ ++C E+GM A+RE R
Sbjct: 334 PLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYI 393
Query: 391 VTQEDFEMAVAKVMKKETEKN 411
V +DFE A V+KK+ +++
Sbjct: 394 VLAKDFEKAYKTVIKKDEQEH 414
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 753 (270.1 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
Identities = 159/345 (46%), Positives = 223/345 (64%)
Query: 79 QEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLI 138
+E G+ + + GK V +K Y + P V + DSY++
Sbjct: 106 EEDGANIDLDSQRKGKCAV-IKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILET 164
Query: 139 LPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEV----------------IELPIK 182
LP++ D V M+V++ P Y IGGLD+QI+E++E I LP+
Sbjct: 165 LPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQEVREARHLTSLLCLSASLVEAIVLPMN 224
Query: 183 HPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRM 242
H E FE+LGI PKGVL+YGPPGTGKTLLARA A T TF++++G +LVQ +IG+G+++
Sbjct: 225 HKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKL 284
Query: 243 VRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKI 302
VR+ F +A+E APSIIF+DE+D+IG+ R +S GD EVQRTMLELLNQLDGF+ + ++
Sbjct: 285 VRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKA-GDREVQRTMLELLNQLDGFQPNTQV 343
Query: 303 KVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAE 362
KV+ ATNR+DILD ALLR GR+DRKIEFP PNEE+R I++IHSR+MN+ ++ +++A
Sbjct: 344 KVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELAR 403
Query: 363 KMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 407
+ +GA+ KAVC EAGM ALR +T ED+ + +V K+
Sbjct: 404 CTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKK 448
Score = 39 (18.8 bits), Expect = 8.5e-77, Sum P(2) = 8.5e-77
Identities = 10/41 (24%), Positives = 22/41 (53%)
Query: 57 LEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKV 97
L+ E+ R R+L E+++++ V ++ M K+K+
Sbjct: 35 LKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAM-KDKI 74
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 172/418 (41%), Positives = 257/418 (61%)
Query: 9 KQPESAAPEEVCAAKGASKQGEGL--RQYYLQH-IHELQLQVRQKTHNLNRLEAQRNELN 65
K PE+ E+ + E L R + L + I ++ +V++ H+ L+ + E
Sbjct: 11 KNPEAMEVEDAIDEEILKMSTEDLKSRTHLLDNEIRIMRSEVQRINHSATTLKERIKENT 70
Query: 66 SRVRMLKE---------ELQLLQEPGSYVGEVVKVMG-KNK-VLVKVHPEGKYVVXXXXX 114
R+++ K EL L++ G V + K K ++K Y +
Sbjct: 71 ERIKVNKTLPYLVSNVVELLDLEDNTEEEGANVDLDAQKTKCAVIKTSTRATYFLPVVGL 130
Query: 115 XXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIK 174
P V + DSY++ LP++ D V M+V++ P Y IGG D+QI+E+
Sbjct: 131 VDPDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELI 190
Query: 175 EVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK 234
E + LP+ H + F +LGI PKGVL+YGPPGTGKT++ARAVA T TF++++G +LVQ
Sbjct: 191 EAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQM 250
Query: 235 YIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLD 294
+IG+G+++VR+ F +A+E AP+IIF+DE+D+IG+ R +S GD EVQRTMLELLNQLD
Sbjct: 251 FIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKA-GDREVQRTMLELLNQLD 309
Query: 295 GFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRG 354
GF+ ++ IKV+ ATNRID+LD ALLR GR+DRKIE P+PNE++R I++IHSR+MN+ +
Sbjct: 310 GFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDARARIMQIHSRKMNVNKD 369
Query: 355 IDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVM-KKETEKN 411
++ +++A + +GA+ KAVC EAGM ALR + EDF A+ +V KK+ N
Sbjct: 370 VNFEELARCTDDFNGAQCKAVCVEAGMIALRRDATEILHEDFMDAILEVQAKKKASLN 427
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 172/418 (41%), Positives = 257/418 (61%)
Query: 9 KQPESAAPEEVCAAKGASKQGEGL--RQYYLQH-IHELQLQVRQKTHNLNRLEAQRNELN 65
K PE+ E+ + E L R + L + I ++ +V++ H+ L+ + E
Sbjct: 11 KNPEAMEVEDAIDEEILKMSTEDLKSRTHLLDNEIRIMRSEVQRINHSATTLKERIKENT 70
Query: 66 SRVRMLKE---------ELQLLQEPGSYVGEVVKVMG-KNK-VLVKVHPEGKYVVXXXXX 114
R+++ K EL L++ G V + K K ++K Y +
Sbjct: 71 ERIKVNKTLPYLVSNVVELLDLEDNTEEEGANVDLDAQKTKCAVIKTSTRATYFLPVVGL 130
Query: 115 XXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIK 174
P V + DSY++ LP++ D V M+V++ P Y IGG D+QI+E+
Sbjct: 131 VDPDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELI 190
Query: 175 EVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK 234
E + LP+ H + F +LGI PKGVL+YGPPGTGKT++ARAVA T TF++++G +LVQ
Sbjct: 191 EAVVLPMTHKDRFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQM 250
Query: 235 YIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLD 294
+IG+G+++VR+ F +A+E AP+IIF+DE+D+IG+ R +S GD EVQRTMLELLNQLD
Sbjct: 251 FIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKA-GDREVQRTMLELLNQLD 309
Query: 295 GFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRG 354
GF+ ++ IKV+ ATNRID+LD ALLR GR+DRKIE P+PNE++R I++IHSR+MN+ +
Sbjct: 310 GFQPNDDIKVIAATNRIDVLDPALLRSGRLDRKIELPHPNEDARARIMQIHSRKMNVNKD 369
Query: 355 IDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVM-KKETEKN 411
++ +++A + +GA+ KAVC EAGM ALR + EDF A+ +V KK+ N
Sbjct: 370 VNFEELARCTDDFNGAQCKAVCVEAGMIALRRDATEILHEDFMDAILEVQAKKKASLN 427
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
Identities = 164/386 (42%), Positives = 234/386 (60%)
Query: 33 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVM 92
R+ L + L+ R+ L L +L+ + +++ LQ G +GEV+K +
Sbjct: 44 RERALSKFKDKLLEHRKWDARLKDLRLSIRDLDKDYEKTENDIKALQSVGQIIGEVLKQL 103
Query: 93 GKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKV 152
+ +VK +Y+V RV+L + + ILP +VDPLV M
Sbjct: 104 DDERYIVKTSSGPRYIVGCRNTIKKENLKNGVRVSLDMTTLTIMRILPREVDPLVYNMTT 163
Query: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
+ + +++ IGGL +QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLA
Sbjct: 164 FEPGEISFNGIGGLTEQIRELREVIELPLKNPELFTRVGIKPPKGVLLYGPPGTGKTLLA 223
Query: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
+AVA FI S +V KYIGE +R++RE+F A+EH P IIFMDE+D+IG R
Sbjct: 224 KAVAATIGANFIFSPASAIVDKYIGESARLIREMFAYAKEHEPCIIFMDEVDAIGGRRFS 283
Query: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
G+ + D E+QRT++ELLNQ+DGF+ + K++MATNR D LD ALLR GR+DRKIE
Sbjct: 284 EGT-SADREIQRTLMELLNQMDGFDTLGQTKIIMATNRPDTLDPALLRAGRLDRKIEIGL 342
Query: 333 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVT 392
PNE RL+I KIH+ ++ D + + +G +GA+++ V TEAG FA+R+ R ++
Sbjct: 343 PNEAGRLEIFKIHTSKVAKQGEFDFEAAVKMSDGFNGADIRNVVTEAGFFAIRDDRDYIL 402
Query: 393 QEDFEMAVAKVMK-KETEKNMSLRKL 417
Q D AV KV K+ E + KL
Sbjct: 403 QNDLMKAVRKVADVKKLEGKLDYEKL 428
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
Identities = 162/367 (44%), Positives = 233/367 (63%)
Query: 42 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKV 101
E QL Q + +LE RN L + +EE++ +Q +G+ ++ + +N +V
Sbjct: 44 ERQLAHLQVMEDYIKLET-RN-LEKELLHAQEEVKRIQSVPLVIGQFLEAVDQNHAIVGS 101
Query: 102 HPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYD 161
Y V P VAL S L +LP + D + +++ ++ PD +Y
Sbjct: 102 TTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPDISYG 161
Query: 162 MIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDC 221
IGGLD Q +E++E +ELP+ H EL++ +GI P+GVL+YGPPG GKT+LA+AVA +T
Sbjct: 162 DIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTAA 221
Query: 222 TFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSE 281
+FIRV GSE VQKY+GEG RMVR++F +A+E++PSIIF+DEID+I + R ++ +G D E
Sbjct: 222 SFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTG-ADRE 280
Query: 282 VQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDI 341
VQR +LELLNQ+DGF+ S +KV+MATNR D LD ALLRPGR+DRKIEFP P+ + +
Sbjct: 281 VQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLV 340
Query: 342 LKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVA 401
RMNL +DL+ + + SGA++ ++C EAGM A+RE R V +D E A
Sbjct: 341 FSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEKAYK 400
Query: 402 KVMKKET 408
V+KK+T
Sbjct: 401 NVVKKDT 407
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
Identities = 159/382 (41%), Positives = 240/382 (62%)
Query: 37 LQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLK-------EELQLLQEPGSYVGEVV 89
L+ ++ + +++Q+ L LE Q + + LK EE++ +Q +G+ +
Sbjct: 37 LEDLYSIYKKLQQE---LEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFL 93
Query: 90 KVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNL 149
+ + +N +V Y V P+ VAL S L +LP + D + +
Sbjct: 94 EAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMM 153
Query: 150 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 209
+ ++ PD Y IGG+D Q +E++E +ELP+ H EL++ +GI P+GVL+YGPPG GKT
Sbjct: 154 LTSDQKPDVLYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKT 213
Query: 210 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 269
+LA+AVAHHT FIRV GSE VQKY+GEG RMVR++F +A+E+AP+IIF+DEID+I +
Sbjct: 214 MLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATK 273
Query: 270 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 329
R ++ +G D EVQR +LELLNQ+DGF+ + +KV+MATNR D LD ALL PGR+DRKIE
Sbjct: 274 RFDAQTG-ADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLCPGRLDRKIE 332
Query: 330 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 389
FP P+ + + + +MNL +DL+ + + SGA++ ++C EAGM A+RE R
Sbjct: 333 FPLPDRRQKRLVFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQEAGMLAVRENRY 392
Query: 390 HVTQEDFEMAVAKVMKKETEKN 411
V +DFE A V+KK+ +++
Sbjct: 393 IVLAKDFEKAYKTVIKKDEQEH 414
>FB|FBgn0028684 [details] [associations]
symbol:Rpt5 "Regulatory particle triple-A ATPase 5"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 HSSP:Q01853 TIGRFAMs:TIGR01242 GO:GO:0008540
ChiTaRS:PSMC3 FlyBase:FBgn0028684 EMBL:AF134402
ProteinModelPortal:Q9XZC3 STRING:Q9XZC3 PRIDE:Q9XZC3
InParanoid:Q9XZC3 ArrayExpress:Q9XZC3 Bgee:Q9XZC3 Uniprot:Q9XZC3
Length = 431
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 163/376 (43%), Positives = 241/376 (64%)
Query: 41 HELQLQVRQKTHNLNRLEAQRNE---LNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNK- 96
HE+Q Q + N +++ + +++ + +L + Q ++ GS V+ K K
Sbjct: 57 HEIQAQNEKIKDNTEKIKVNKTLPYLVSNVIELLDVDPQEEEDDGSVT--VLDNQRKGKC 114
Query: 97 VLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVP 156
++K Y + P + D Y++ LP++ D V M+V++ P
Sbjct: 115 AVIKTSTRQAYFLPVIGLVDAEKLKPGDLAGVNKDFYLILETLPAEYDARVKAMEVDERP 174
Query: 157 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216
+ IGGLD+QI+E+ E + LP+ H E F++LGI PKGV+LYGPPGTGKTLLARA A
Sbjct: 175 TEQFSDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVILYGPPGTGKTLLARACA 234
Query: 217 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSG 276
T TF++++G +LVQ +IG+G+++VR+ F +A+E AP+IIF+DE+D+IG+ R +S
Sbjct: 235 AQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDAIGTKRFDSEKA 294
Query: 277 NGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEE 336
GD EVQRTMLELLNQL+GF ++ IKV+ ATNR+DIL ALLR GR+DRKIEFP+PNEE
Sbjct: 295 -GDREVQRTMLELLNQLNGFSSTADIKVIAATNRVDILP-ALLRSGRLDRKIEFPHPNEE 352
Query: 337 SRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDF 396
+R I++IHSR+MN+ ++ ++++ + +GA+ KAVC EAGM ALR VT EDF
Sbjct: 353 ARARIMQIHSRKMNVSNDVNFEELSRSTDDFNGAQCKAVCVEAGMIALRRSANSVTHEDF 412
Query: 397 EMAVAKVM-KKETEKN 411
A+ +V KK+ N
Sbjct: 413 MDAIMEVQAKKKANLN 428
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 160/350 (45%), Positives = 224/350 (64%)
Query: 58 EAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXX 117
E + NE+ + L+L E + + + GK V +K +
Sbjct: 86 EEEENEIKDEYDLYDNNLKLSHEGFRDIDDEKR--GKCMV-IKTSTRQTIFLPVPGLIDA 142
Query: 118 XXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVI 177
P V + DSY++ LP + D V M+V + P Y IGGLD+QI+++ E I
Sbjct: 143 SELKPGDLVGVNKDSYLIIDKLPQEYDNRVKAMEVIEKPSEDYSDIGGLDKQIEDLVEAI 202
Query: 178 ELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIG 237
LP+ H E FE +GI PKGVL++GPPGTGKTLLARA A T+ TF++++G +LVQ +IG
Sbjct: 203 VLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLVQMFIG 262
Query: 238 EGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFE 297
+G++MVR+ F +A+E AP+IIF+DE+D+IG+ R +S +GD EVQRTMLELLNQLDGF
Sbjct: 263 DGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSEL-SGDREVQRTMLELLNQLDGFS 321
Query: 298 ASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDL 357
+ +KV+ ATNR D LD ALLR GR+DRKIE P+PNEESR IL+IHSR+MN+ + ++
Sbjct: 322 TDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESRARILQIHSRKMNVHKDVNF 381
Query: 358 KKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 407
+++A + +GA+LKAVC EAGM ALR + EDF + V+ K+
Sbjct: 382 EELARSTDDFNGAQLKAVCVEAGMIALRRGATEIDHEDFVEGITSVLSKK 431
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 160/350 (45%), Positives = 224/350 (64%)
Query: 58 EAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXX 117
E + NE+ + L+L E + + + GK V +K +
Sbjct: 86 EEEENEIKDEYDLYDNNLKLSHEGFRDIDDEKR--GKCMV-IKTSTRQTIFLPVPGLIDA 142
Query: 118 XXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVI 177
P V + DSY++ LP + D V M+V + P Y IGGLD+QI+++ E I
Sbjct: 143 SELKPGDLVGVNKDSYLIIDKLPQEYDNRVKAMEVIEKPSEDYSDIGGLDKQIEDLVEAI 202
Query: 178 ELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIG 237
LP+ H E FE +GI PKGVL++GPPGTGKTLLARA A T+ TF++++G +LVQ +IG
Sbjct: 203 VLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLVQMFIG 262
Query: 238 EGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFE 297
+G++MVR+ F +A+E AP+IIF+DE+D+IG+ R +S +GD EVQRTMLELLNQLDGF
Sbjct: 263 DGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSEL-SGDREVQRTMLELLNQLDGFS 321
Query: 298 ASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDL 357
+ +KV+ ATNR D LD ALLR GR+DRKIE P+PNEESR IL+IHSR+MN+ + ++
Sbjct: 322 TDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESRARILQIHSRKMNVHKDVNF 381
Query: 358 KKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 407
+++A + +GA+LKAVC EAGM ALR + EDF + V+ K+
Sbjct: 382 EELARSTDDFNGAQLKAVCVEAGMIALRRGATEIDHEDFVEGITSVLSKK 431
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
Identities = 157/373 (42%), Positives = 237/373 (63%)
Query: 35 YYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGK 94
Y L +++L++ Q + + E QRN L +EE++ ++ +G+ ++ + +
Sbjct: 28 YVLYKKLQMELELIQVQEDYIK-EEQRN-LKKEFIHAQEEVKRIKAVPLVIGQFLEAVDE 85
Query: 95 NKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEK 154
N +V Y V PS+ V L S L ++P + D ++++ ++
Sbjct: 86 NNGIVASTTGSNYYVRVLSTIDREQLKPSSSVGLHKQSNCLVDLVPPEADSTISMLSPDE 145
Query: 155 VPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 214
PD +Y IGGLD Q +EI+E +ELP+ H +L++ +GI P+GVLL+GPPG GKT+LA+A
Sbjct: 146 KPDISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKA 205
Query: 215 VAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESG 274
VAHHT +FIRV GSE VQKY+GEG RMVR+LF +A++++PSIIF+DEID+I + R ++
Sbjct: 206 VAHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIATKRFDAQ 265
Query: 275 SGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPN 334
+G D EVQR +LELLNQ+DGF+ + IKV+MATNR D LD ALLRPGR+DRKIE P P+
Sbjct: 266 TG-ADREVQRILLELLNQMDGFDETTNIKVIMATNRADTLDPALLRPGRLDRKIELPLPD 324
Query: 335 EESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQE 394
+ + + +MN+ +DL+ I + + S A++ A+C EAGM A+RE R V +
Sbjct: 325 RRQKRLVFTTITSKMNVGEDVDLEDIIARPDKISNADINAICQEAGMHAVRENRYVVNAK 384
Query: 395 DFEMAVAKVMKKE 407
DFE ++K+
Sbjct: 385 DFEKGYKTSVRKD 397
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
Identities = 150/339 (44%), Positives = 224/339 (66%)
Query: 72 KEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRND 131
+EE++ ++ +G++++++ N +V+ V PS VAL+
Sbjct: 61 QEEVKRIRSVPLLIGQLLEMVDSNTGIVQSTSGSTLCVRILSTIDRELLKPSASVALQRH 120
Query: 132 SYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLG 191
S L LP + D ++L+ ++ P +Y IGG D Q +E++E +ELP+ H L++ +G
Sbjct: 121 SNALVDTLPPESDSSIHLLGADEKPSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIG 180
Query: 192 IAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAR 251
I P+GVLLYGPPGTGKT+LA+AVAHHT FIRV GSE VQKY+GEG R+VR++F +AR
Sbjct: 181 IDPPRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLAR 240
Query: 252 EHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRI 311
E++P+IIF+DEID+I + R ++ +G D EVQR ++ELLNQ+DGF+ S +KV+MATNR
Sbjct: 241 ENSPAIIFIDEIDAIATKRFDAQTG-ADREVQRILMELLNQMDGFDVSVNVKVIMATNRQ 299
Query: 312 DILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAE 371
D LD ALLRPGR+DRKIEFP P+ + I ++ + +MNL +DL+ + + SGAE
Sbjct: 300 DTLDPALLRPGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAE 359
Query: 372 LKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEK 410
++++C EAGM A+R+ R + +DFE +KK T +
Sbjct: 360 IQSICQEAGMHAIRKNRYVILPKDFEKGYKASIKKNTHE 398
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 723 (259.6 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 148/340 (43%), Positives = 223/340 (65%)
Query: 70 MLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALR 129
M +E+ + QE + E +V GK+ V +K + P + +
Sbjct: 97 MQPDEVDV-QESANQNSEATRV-GKSAV-IKTSTRQTIFLPLIGLVEPEELHPGDLIGVN 153
Query: 130 NDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFES 189
DSY++ LPS+ D V M+V++ P Y IGGL +QI+E+ E I LP++ + F
Sbjct: 154 KDSYLIIDKLPSEYDSRVKAMEVDEKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRK 213
Query: 190 LGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVM 249
LG+ PKG L++GPPGTGKTLLARA A ++ TF++++ +LVQ +IG+G+++VR+ F +
Sbjct: 214 LGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFAL 273
Query: 250 AREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATN 309
A+E +P+IIF+DE+D+IG+ R +S GD EVQRTMLELLNQLDGF + +++KV+ ATN
Sbjct: 274 AKEKSPAIIFIDELDAIGTKRFDSEKA-GDREVQRTMLELLNQLDGFSSDDRVKVIAATN 332
Query: 310 RIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASG 369
R+D LD ALLR GR+DRK+EFP PNEE+R+ IL+IHSR+M + I+ +++A + +G
Sbjct: 333 RVDTLDPALLRSGRLDRKLEFPLPNEEARVGILRIHSRKMAIDDDINWEELARSTDEYNG 392
Query: 370 AELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 409
A LK+VC EAGM ALR+ + E F + +V ++++
Sbjct: 393 AMLKSVCVEAGMIALRQGDTKINHEHFMDGILEVQMRKSK 432
Score = 48 (22.0 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 9/23 (39%), Positives = 18/23 (78%)
Query: 57 LEAQRNELNSRVRMLKEELQLLQ 79
L A +ELNSR R+L+ ++++++
Sbjct: 32 LAAGIDELNSRTRLLENDIKVMK 54
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
Identities = 152/373 (40%), Positives = 232/373 (62%)
Query: 35 YYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGK 94
YY++ + L+ Q+ + ++ + L + K E++ +Q +G+ + ++
Sbjct: 13 YYIR-LKNLKKQIDILNIQEDYIKEEHKNLKRELIRSKNEIKRIQSVPLIIGQFLDIIDN 71
Query: 95 NKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEK 154
N +V Y V PS VAL S+ + ILPS+ D + L+++ +
Sbjct: 72 NYGIVSSTAGSNYYVRILSTLNKEDLKPSVSVALHRHSHSIVNILPSESDSSIQLLQITE 131
Query: 155 VPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 214
P+ Y +GGLD Q +E+KE +ELP+ PEL+E +GI P G+L+YGPPGTGKT+L +A
Sbjct: 132 RPNVKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKA 191
Query: 215 VAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESG 274
VA+ T TFI V GSE VQKY+GEG RMVR++F +ARE++PSIIF+DE+D+I + R ++
Sbjct: 192 VANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDAQ 251
Query: 275 SGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPN 334
+G D EVQR +LELLNQ+DGF+ S +KV+MATNR D LD ALLRPGR+DRKIEFP P+
Sbjct: 252 TG-ADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPD 310
Query: 335 EESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQE 394
+ + I + +MN+ ++++ + + S A++ A+ EAGM A+R+ R +T
Sbjct: 311 RKQKRLIFQTIISKMNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQAIRKNRYIITAN 370
Query: 395 DFEMAVAKVMKKE 407
DFE ++K+
Sbjct: 371 DFEQGYRTHVRKQ 383
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
Identities = 152/373 (40%), Positives = 232/373 (62%)
Query: 35 YYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGK 94
YY++ + L+ Q+ + ++ + L + K E++ +Q +G+ + ++
Sbjct: 13 YYIR-LKNLKKQIDILNIQEDYIKEEHKNLKRELIRSKNEIKRIQSVPLIIGQFLDIIDN 71
Query: 95 NKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEK 154
N +V Y V PS VAL S+ + ILPS+ D + L+++ +
Sbjct: 72 NYGIVSSTAGSNYYVRILSTLNKEDLKPSVSVALHRHSHSIVNILPSESDSSIQLLQITE 131
Query: 155 VPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 214
P+ Y +GGLD Q +E+KE +ELP+ PEL+E +GI P G+L+YGPPGTGKT+L +A
Sbjct: 132 RPNVKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKA 191
Query: 215 VAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESG 274
VA+ T TFI V GSE VQKY+GEG RMVR++F +ARE++PSIIF+DE+D+I + R ++
Sbjct: 192 VANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDAQ 251
Query: 275 SGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPN 334
+G D EVQR +LELLNQ+DGF+ S +KV+MATNR D LD ALLRPGR+DRKIEFP P+
Sbjct: 252 TG-ADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPD 310
Query: 335 EESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQE 394
+ + I + +MN+ ++++ + + S A++ A+ EAGM A+R+ R +T
Sbjct: 311 RKQKRLIFQTIISKMNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQAIRKNRYIITAN 370
Query: 395 DFEMAVAKVMKKE 407
DFE ++K+
Sbjct: 371 DFEQGYRTHVRKQ 383
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 745 (267.3 bits), Expect = 8.4e-74, P = 8.4e-74
Identities = 160/354 (45%), Positives = 230/354 (64%)
Query: 58 EAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXX 117
+ QR+ VR +EE++ +Q +G+ ++ + +N +V+ YVV
Sbjct: 64 DEQRSLKRELVRA-QEEIKRIQSVPLVIGQFMEAIDQNTGIVQSSTGSNYVVRILSTLDR 122
Query: 118 XXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVI 177
PS+ VAL S L ILP + D + ++ + PD TY +GGLD Q +EI+E +
Sbjct: 123 EKLKPSSSVALHRHSNALVDILPPEADSSIAMLGENEKPDVTYADVGGLDMQKQEIREAV 182
Query: 178 ELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIG 237
ELP+ H +L++ +GI P+GVLLYGPPGTGKT+L +AVA+ T +FIRV+GSE VQKY+G
Sbjct: 183 ELPLTHFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTTASFIRVNGSEFVQKYLG 242
Query: 238 EGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFE 297
EG RMVR++F MARE++P+IIF+DEID+I + R ++ +G D EVQR +LELLNQ+DGFE
Sbjct: 243 EGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQTG-ADREVQRILLELLNQMDGFE 301
Query: 298 ASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNE--ESRLDILKIHSRRMNLMRGI 355
++ +KV+MATNR D LD ALLRPGR+DRKIEFP+ + E RL I S+ M+L +
Sbjct: 302 QTSNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRERRLIFSTIASK-MSLSPEV 360
Query: 356 DLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 409
DL + + SGA + A+ EAG+ A+R+ R ++ Q D E A + +K E
Sbjct: 361 DLDSLIVRNEPLSGAVIAAIMQEAGLRAVRKNRYNIIQSDLEDAYSAQVKTGQE 414
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 735 (263.8 bits), Expect = 9.6e-73, P = 9.6e-73
Identities = 142/289 (49%), Positives = 211/289 (73%)
Query: 122 PSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPI 181
P+ + + DSY++ LPS+ D V M+V++ P Y IGGLD+QI+E+ E + LP+
Sbjct: 161 PNDLIGVNKDSYLVLDTLPSEYDSRVKAMEVDEKPTEDYSDIGGLDKQIEELIEAVVLPM 220
Query: 182 KHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSR 241
K + F++LGI PKG L+YGPPGTGKTLLARA A + TF++++ +LVQ +IG+G++
Sbjct: 221 KQADKFKNLGIKPPKGALMYGPPGTGKTLLARACAAQSGATFLKLAAPQLVQMFIGDGAK 280
Query: 242 MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK 301
+VR+ F +A+E AP+IIF+DE+D+IG+ R +S +GD EVQRTMLELLNQLDGF + ++
Sbjct: 281 LVRDAFALAKEKAPTIIFIDELDAIGTKRFDSDK-SGDREVQRTMLELLNQLDGFGSDDR 339
Query: 302 IKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNL-MRGIDLKKI 360
+KVL ATNR+D LD ALLR GR+DRKIEFP P+EE+R +LKIH+R+++ ++ +++
Sbjct: 340 VKVLAATNRVDTLDPALLRSGRLDRKIEFPLPSEEARESVLKIHARKLHCDNNSVNWREL 399
Query: 361 AEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 409
A + +GA+LKAV EAGM ALR + + EDF A+++V ++++
Sbjct: 400 ARSTDEFNGAQLKAVTVEAGMIALRNGKSIIKHEDFVEAISEVQARKSK 448
>UNIPROTKB|O42587 [details] [associations]
symbol:psmc3-a "26S protease regulatory subunit 6A-A"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 CTD:4913 TIGRFAMs:TIGR01242 EMBL:Y10461
RefSeq:NP_001080249.1 UniGene:Xl.12803 ProteinModelPortal:O42587
PRIDE:O42587 GeneID:379941 KEGG:xla:379941 Xenbase:XB-GENE-962533
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 Uniprot:O42587
Length = 405
Score = 731 (262.4 bits), Expect = 2.5e-72, P = 2.5e-72
Identities = 156/357 (43%), Positives = 226/357 (63%)
Query: 32 LRQYYLQHIHELQLQVRQKTHNLNRLEAQRNE---LNSRVRMLKEELQLLQEPGSYVGEV 88
++ L+ HELQ + N +++ + +++ + +L + +E G+ +
Sbjct: 39 MKSEVLRVTHELQAMRDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLD 98
Query: 89 VKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVN 148
+ GK V +K Y + P V + DSY++ LP++ D V
Sbjct: 99 SQRKGKCAV-IKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVK 157
Query: 149 LMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 208
M+V++ P Y IGGLD+QI+E+ E I LP+ H E FE+LGI PKGVL+YGPPGTGK
Sbjct: 158 AMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGK 217
Query: 209 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 268
TLLARA A T TF++++G +LVQ +IG+G+++VR+ F +A+E APSIIF+DE+D+IG+
Sbjct: 218 TLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGT 277
Query: 269 ARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKI 328
R +S GD EVQRTMLELLNQLDGF+ + ++KV+ ATNR+DILD ALLR GR+DRKI
Sbjct: 278 KRFDSEKA-GDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKI 336
Query: 329 EFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALR 385
EFP PNEE+R I++IHSR+MN+ ++ +++A + K EAGM ALR
Sbjct: 337 EFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCPTISMALSAKQFGVEAGMIALR 393
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
Identities = 158/370 (42%), Positives = 231/370 (62%)
Query: 40 IHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLV 99
+ +L+ + T + ++ ++ L ++ +EE++ +Q +G+ ++ + +N +V
Sbjct: 51 LKKLEKEYELLTLQEDYIKDEQRHLKRELKRAQEEVKRIQSVPLVIGQFLEPIDQNTGIV 110
Query: 100 KVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDST 159
YVV PS VAL S L ILP D +++M + PD T
Sbjct: 111 SSTTGMSYVVRILSTLDRELLKPSMSVALHRHSNALVDILPPDSDSSISVMGENEKPDVT 170
Query: 160 YDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 219
Y +GGLD Q +EI+E +ELP+ +L+E +GI P+GVLLYGPPGTGKT+L +AVA+ T
Sbjct: 171 YADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANST 230
Query: 220 DCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGD 279
FIRV+GSE V KY+GEG RMVR++F +ARE+APSIIF+DE+DSI + R ++ +G+ D
Sbjct: 231 KAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGS-D 289
Query: 280 SEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNE--ES 337
EVQR ++ELL Q+DGF+ S +KV+MATNR D LD ALLRPGR+DRKIEFP+ + E
Sbjct: 290 REVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRER 349
Query: 338 RLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFE 397
RL I S+ M+L DL + + + SGA + A+ EAG+ A+R+ R + Q D E
Sbjct: 350 RLIFGTIASK-MSLAPEADLDSLIIRNDSLSGAVIAAIMQEAGLRAVRKNRYVILQSDLE 408
Query: 398 MAVAKVMKKE 407
A A +K +
Sbjct: 409 EAYATQVKTD 418
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 163/377 (43%), Positives = 232/377 (61%)
Query: 42 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGK------- 94
++ L++++ L+ L Q + R LK EL QE + V V+G+
Sbjct: 29 DVYLKLKKLEKELDLLLLQEEYIKDEQRHLKRELVRAQEEVKRIKSVPLVIGQFLEPIDE 88
Query: 95 NKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEK 154
N +V YVV S+ VAL S L ILP + D ++++ ++
Sbjct: 89 NTGIVSSTTGSNYVVRILSTLDRELLKASSSVALHRHSNALVDILPPEADSSISIVGEDQ 148
Query: 155 VPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 214
PD TY +GGLD Q +EIKE +ELP+ +L+ +GI P+GVLLYGPPGTGKT+L +A
Sbjct: 149 KPDVTYADVGGLDMQKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKA 208
Query: 215 VAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESG 274
VA+ T +FIR++GSE VQKY+GEG RMVR++F +ARE++P+IIF+DEID+I + R ++
Sbjct: 209 VANSTTASFIRINGSEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATKRFDAQ 268
Query: 275 SGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPN 334
+G D EVQR +LELLNQ+DGF+ ++ +KV+MATNR D LD ALLRPGR+DRKIEFP+
Sbjct: 269 TG-ADREVQRILLELLNQMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDRKIEFPSLK 327
Query: 335 E--ESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVT 392
+ E RL I S+ M+L DL + + + SGA + A+ EAG+ A+R+ R +
Sbjct: 328 DRRERRLIFSTIASK-MSLAPEADLDSLIIRNDPLSGAVIAAIMQEAGLRAVRKNRYMIL 386
Query: 393 QEDFEMAVAKVMKKETE 409
Q D E A +K TE
Sbjct: 387 QSDLEEAYTSQVKTGTE 403
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 163/377 (43%), Positives = 232/377 (61%)
Query: 42 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGK------- 94
++ L++++ L+ L Q + R LK EL QE + V V+G+
Sbjct: 29 DVYLKLKKLEKELDLLLLQEEYIKDEQRHLKRELVRAQEEVKRIKSVPLVIGQFLEPIDE 88
Query: 95 NKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEK 154
N +V YVV S+ VAL S L ILP + D ++++ ++
Sbjct: 89 NTGIVSSTTGSNYVVRILSTLDRELLKASSSVALHRHSNALVDILPPEADSSISIVGEDQ 148
Query: 155 VPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 214
PD TY +GGLD Q +EIKE +ELP+ +L+ +GI P+GVLLYGPPGTGKT+L +A
Sbjct: 149 KPDVTYADVGGLDMQKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKA 208
Query: 215 VAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESG 274
VA+ T +FIR++GSE VQKY+GEG RMVR++F +ARE++P+IIF+DEID+I + R ++
Sbjct: 209 VANSTTASFIRINGSEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATKRFDAQ 268
Query: 275 SGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPN 334
+G D EVQR +LELLNQ+DGF+ ++ +KV+MATNR D LD ALLRPGR+DRKIEFP+
Sbjct: 269 TG-ADREVQRILLELLNQMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDRKIEFPSLK 327
Query: 335 E--ESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVT 392
+ E RL I S+ M+L DL + + + SGA + A+ EAG+ A+R+ R +
Sbjct: 328 DRRERRLIFSTIASK-MSLAPEADLDSLIIRNDPLSGAVIAAIMQEAGLRAVRKNRYMIL 386
Query: 393 QEDFEMAVAKVMKKETE 409
Q D E A +K TE
Sbjct: 387 QSDLEEAYTSQVKTGTE 403
>UNIPROTKB|J9NWB0 [details] [associations]
symbol:J9NWB0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074818 EMBL:AAEX03014432
Ensembl:ENSCAFT00000039483 OMA:AGSELIQ Uniprot:J9NWB0
Length = 436
Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
Identities = 157/357 (43%), Positives = 222/357 (62%)
Query: 56 RLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXX 115
R + Q L + + ++ L+ V + +++ N V+V ++ V
Sbjct: 80 RNQEQMKPLEEKQEEERSKVDDLRGTSMSVVTLEEIIDGNHVIVSTSVGSEHYVSILSFV 139
Query: 116 XXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKV---PDSTYDMIGGLDQQIKE 172
P L + + + ++ DPLV +MKVEKV P TY I GLD QI+E
Sbjct: 140 DKDLLEPGCSNLLNHKLHAVIVVFMDDTDPLVTVMKVEKVEKAPQETYADIRGLDNQIQE 199
Query: 173 IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV 232
IKE +ELP+ HPE +E +GI PKGV+LYGPPGT K AVA+ T TF+RV+GSEL+
Sbjct: 200 IKESLELPLTHPENYEEMGIKPPKGVILYGPPGTVK-----AVANRTSATFLRVAGSELI 254
Query: 233 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQ 292
QKY+G+G ++VRE F +A EHAPSI+F+DEID+IG+ R +S SG G+ E+QRTMLELLNQ
Sbjct: 255 QKYLGDGPKVVRESFRVAEEHAPSIVFIDEIDAIGTRRYDSNSG-GEREIQRTMLELLNQ 313
Query: 293 LDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLM 352
LDGF++ +KV+MATNRI LD AL + ++ P P+E+++ I +IH+ RM L
Sbjct: 314 LDGFDSRGDVKVIMATNRIKTLDPALSHQAALTGRLS-PLPDEKTKKHIFQIHTSRMTLA 372
Query: 353 RGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 409
+ L I K + SGA++KA+CTEAG+ ALRE R+ VT EDF+ + V+ K+ E
Sbjct: 373 DDVTLDLIMAK-DDLSGADIKAICTEAGLMALREHRMKVTNEDFKKSKENVLYKKQE 428
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 716 (257.1 bits), Expect = 9.9e-71, P = 9.9e-71
Identities = 155/374 (41%), Positives = 230/374 (61%)
Query: 42 ELQLQVRQKT--HNLNRLEAQRNELNSRVRMLK-------EELQLLQEPGSYVGEVVKVM 92
E+ L R K L L+ Q + + LK EE++ +Q +G+ ++ +
Sbjct: 6 EIDLYNRWKALERQLEMLDLQEGFIKEDCKSLKRELIRAQEEVKRIQSVPLVIGQFLEAI 65
Query: 93 GKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKV 152
+N +V YVV PS VAL+ S L ILP + D +++++
Sbjct: 66 DQNTAIVGSTTGSNYVVRILSTLDRELLKPSASVALQRHSNALVDILPPEADSSISMLRP 125
Query: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
++ PD +Y +GGLD Q +E++E +ELP+ +L+ +GI P+GVLLYGPPGTGKT+L
Sbjct: 126 DERPDVSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLV 185
Query: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
+AVA+ T FIRV GSE VQKY+GEG RMVR++F MARE+AP+IIF+DEID+I + R +
Sbjct: 186 KAVANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFD 245
Query: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
+ +G D EVQR ++ELL Q+DGF+ +KV+MATNR D LD ALLRPGR+DRKIEFP+
Sbjct: 246 AQTG-ADREVQRILIELLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPS 304
Query: 333 PNEE-SRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHV 391
+ R + + + +M L +DL + + +SGA++ A+ +AG+ A+R+ R +
Sbjct: 305 YRDRRQRRLVFQTITAKMLLSPEVDLDTFIMRPDASSGAQIAAIMQDAGLLAVRKSRGVI 364
Query: 392 TQEDFEMAVAKVMK 405
Q D E A A+ +K
Sbjct: 365 LQSDIEEAYARAVK 378
>UNIPROTKB|F1LZ09 [details] [associations]
symbol:F1LZ09 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR005937 Pfam:PF00004 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00780208
Ensembl:ENSRNOT00000039743 Uniprot:F1LZ09
Length = 369
Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
Identities = 135/350 (38%), Positives = 210/350 (60%)
Query: 58 EAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXX 117
+ Q+N L +E+++ +Q +G+ ++ + +N V+V
Sbjct: 12 DEQKN-LKKEFLHAQEKVKQIQSIPLVIGQFLEAVDQNTVIVGSITGSNCYFCILSTIDQ 70
Query: 118 XXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVI 177
P+ VAL S L +LP + + + ++ ++ P+ Y IG +D Q +E+ E +
Sbjct: 71 ELLKPNASVALHKHSNTLVNVLPPEAESSIMMLTSDQKPNVIYADIGSMDIQKQEVWEAM 130
Query: 178 ELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIG 237
ELP+ H EL++ +GI P+GVL+YGPPG GKT+LA+ VAHH FI V GSE V KY+G
Sbjct: 131 ELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKTVAHHMIAAFIHVVGSEFVHKYLG 190
Query: 238 EGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFE 297
EG R++ ++F + +E+AP+IIF+DEID+I + R ++ +G D EVQR +LELLNQ+DGF+
Sbjct: 191 EGPRIIWDVFHLDKENAPAIIFIDEIDAIATKRFDAQTG-ADREVQRILLELLNQMDGFD 249
Query: 298 ASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDL 357
+ +K +MATNR D LD LLRPG +D KIEFP P+ RL I S+ MNL +++
Sbjct: 250 QNISVKAIMATNRKDTLDPTLLRPGHLDHKIEFPLPDHRKRLIFSTITSK-MNLSEEVNV 308
Query: 358 KKIAEKMNGASGAELKAVCTEAGMFALRERRIHV-TQEDFEMAVAKVMKK 406
+ + SGA++ ++C E+GM + E H+ +DF+ A V+KK
Sbjct: 309 EDYVACPDKISGADINSICQESGMLTVCEN-CHIFLAKDFKKAYKTVIKK 357
>UNIPROTKB|J3QRW1 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AC015651
ChiTaRS:PSMC5 HGNC:HGNC:9552 Ensembl:ENST00000579708 Uniprot:J3QRW1
Length = 143
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 108/133 (81%), Positives = 117/133 (87%)
Query: 100 KVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDST 159
+VHPEGK+VV P+ RVALRNDSY LH ILP+KVDPLV+LM VEKVPDST
Sbjct: 11 RVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDST 70
Query: 160 YDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 219
Y+MIGGLD+QIKEIKEVIELP+KHPELFE+LGIAQPKGVLLYGPPGTGKTLLARAVAHHT
Sbjct: 71 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 130
Query: 220 DCTFIRVSGSELV 232
DCTFIRVSGSELV
Sbjct: 131 DCTFIRVSGSELV 143
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 535 (193.4 bits), Expect = 4.8e-54, Sum P(2) = 4.8e-54
Identities = 106/243 (43%), Positives = 167/243 (68%)
Query: 160 YDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 219
YD IGG +Q+ +I+E++ELP++HP+LF+S+GI PKG+L+YGPPGTGKT++ARAVA+ T
Sbjct: 214 YDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANET 273
Query: 220 DCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGD 279
F ++G E++ K GE +R+ F A +++PSIIF+DEIDSI R ++ NG+
Sbjct: 274 GAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDKT---NGE 330
Query: 280 SEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRL 339
E +R + +LL +DG +A + + V+ ATNR + +D AL R GR DR+++ P+ E RL
Sbjct: 331 VE-RRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGRL 389
Query: 340 DILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR--IHVTQEDFE 397
+IL+IH++ M L +DL+ IA + +G GA++ ++C+EA M +RE+ I + +E +
Sbjct: 390 EILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLIDLEEETID 449
Query: 398 MAV 400
V
Sbjct: 450 TEV 452
Score = 505 (182.8 bits), Expect = 1.4e-50, Sum P(2) = 1.4e-50
Identities = 106/236 (44%), Positives = 150/236 (63%)
Query: 152 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLL 211
VE V + T+D IGGLD E+KE +E P+ HP+ ++ G+A KGVL +GPPGTGKTLL
Sbjct: 480 VENV-NVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLL 538
Query: 212 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARM 271
A+AVA FI V G EL+ + GE +R++F AR AP+++F+DE+DSI AR
Sbjct: 539 AKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARG 598
Query: 272 ES-GSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEF 330
S G G S+ R + +LL ++DG A + V+ ATNR D +D ALLRPGR+D+ I
Sbjct: 599 GSHGDAGGASD--RVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYV 656
Query: 331 PNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
P P+E +RL IL+ R L G+DL +IA+ +G SGA+L + + FA+++
Sbjct: 657 PLPDEPARLSILQAQLRNTPLEPGLDLNEIAKITHGFSGADLSYIVQRSAKFAIKD 712
Score = 50 (22.7 bits), Expect = 4.8e-54, Sum P(2) = 4.8e-54
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 48 RQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNK 96
R+K N ++ N+ NS + M ++LLQ + G+ V V GK +
Sbjct: 30 RKKKDNALVVDDATNDDNSVITMSSNTMELLQ---LFRGDTVLVKGKKR 75
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 535 (193.4 bits), Expect = 4.8e-54, Sum P(2) = 4.8e-54
Identities = 106/243 (43%), Positives = 167/243 (68%)
Query: 160 YDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 219
YD IGG +Q+ +I+E++ELP++HP+LF+S+GI PKG+L+YGPPGTGKT++ARAVA+ T
Sbjct: 214 YDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARAVANET 273
Query: 220 DCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGD 279
F ++G E++ K GE +R+ F A +++PSIIF+DEIDSI R ++ NG+
Sbjct: 274 GAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDKT---NGE 330
Query: 280 SEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRL 339
E +R + +LL +DG +A + + V+ ATNR + +D AL R GR DR+++ P+ E RL
Sbjct: 331 VE-RRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGRL 389
Query: 340 DILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR--IHVTQEDFE 397
+IL+IH++ M L +DL+ IA + +G GA++ ++C+EA M +RE+ I + +E +
Sbjct: 390 EILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLIDLEEETID 449
Query: 398 MAV 400
V
Sbjct: 450 TEV 452
Score = 505 (182.8 bits), Expect = 1.4e-50, Sum P(2) = 1.4e-50
Identities = 106/236 (44%), Positives = 150/236 (63%)
Query: 152 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLL 211
VE V + T+D IGGLD E+KE +E P+ HP+ ++ G+A KGVL +GPPGTGKTLL
Sbjct: 480 VENV-NVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLL 538
Query: 212 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARM 271
A+AVA FI V G EL+ + GE +R++F AR AP+++F+DE+DSI AR
Sbjct: 539 AKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARG 598
Query: 272 ES-GSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEF 330
S G G S+ R + +LL ++DG A + V+ ATNR D +D ALLRPGR+D+ I
Sbjct: 599 GSHGDAGGASD--RVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYV 656
Query: 331 PNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
P P+E +RL IL+ R L G+DL +IA+ +G SGA+L + + FA+++
Sbjct: 657 PLPDEPARLSILQAQLRNTPLEPGLDLNEIAKITHGFSGADLSYIVQRSAKFAIKD 712
Score = 50 (22.7 bits), Expect = 4.8e-54, Sum P(2) = 4.8e-54
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 48 RQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNK 96
R+K N ++ N+ NS + M ++LLQ + G+ V V GK +
Sbjct: 30 RKKKDNALVVDDATNDDNSVITMSSNTMELLQ---LFRGDTVLVKGKKR 75
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 117/265 (44%), Positives = 171/265 (64%)
Query: 150 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 209
M EK T+D + G+D+ +E++E++E +++P+ F LG PKG LL GPPGTGKT
Sbjct: 145 MLTEKHGRVTFDDVAGIDEAKEELEEIVEF-LRNPQKFSRLGGKIPKGALLVGPPGTGKT 203
Query: 210 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 269
LLARA+A F +SGS+ V+ ++G G+ VR++F A+++AP I+F+DEID++G
Sbjct: 204 LLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRH 263
Query: 270 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 329
R +G G G+ E ++T+ +LL ++DGFEA+ + +L ATNR D+LD ALLRPGR DR +
Sbjct: 264 R-GAGYGGGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRNVT 322
Query: 330 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 389
NP+ + R IL +H+R+ L +DL+ IA G SGA+L + EA + A R R
Sbjct: 323 VGNPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAARVGRR 382
Query: 390 HVTQEDFEMAVAKVMKKETEKNMSL 414
VT EDFE A KVM ++M L
Sbjct: 383 FVTMEDFENAKDKVMMGAERRSMVL 407
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 117/265 (44%), Positives = 171/265 (64%)
Query: 150 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 209
M EK T+D + G+D+ +E++E++E +++P+ F LG PKG LL GPPGTGKT
Sbjct: 145 MLTEKHGRVTFDDVAGIDEAKEELEEIVEF-LRNPQKFSRLGGKIPKGALLVGPPGTGKT 203
Query: 210 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 269
LLARA+A F +SGS+ V+ ++G G+ VR++F A+++AP I+F+DEID++G
Sbjct: 204 LLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRH 263
Query: 270 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 329
R +G G G+ E ++T+ +LL ++DGFEA+ + +L ATNR D+LD ALLRPGR DR +
Sbjct: 264 R-GAGYGGGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRNVT 322
Query: 330 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 389
NP+ + R IL +H+R+ L +DL+ IA G SGA+L + EA + A R R
Sbjct: 323 VGNPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAARVGRR 382
Query: 390 HVTQEDFEMAVAKVMKKETEKNMSL 414
VT EDFE A KVM ++M L
Sbjct: 383 FVTMEDFENAKDKVMMGAERRSMVL 407
>UNIPROTKB|E9PKD5 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC090559 HGNC:HGNC:9549 ChiTaRS:PSMC3
IPI:IPI00978735 ProteinModelPortal:E9PKD5 SMR:E9PKD5 PRIDE:E9PKD5
Ensembl:ENST00000524447 ArrayExpress:E9PKD5 Bgee:E9PKD5
Uniprot:E9PKD5
Length = 294
Score = 508 (183.9 bits), Expect = 3.3e-53, Sum P(2) = 3.3e-53
Identities = 98/162 (60%), Positives = 129/162 (79%)
Query: 167 DQQIK--EIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFI 224
D ++K E+ E I LP+ H E FE+LGI PKGVL+YGPPGTGKTLLARA A T TF+
Sbjct: 134 DSRVKAMELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFL 193
Query: 225 RVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQR 284
+++G +LVQ +IG+G+++VR+ F +A+E APSIIF+DE+D+IG+ R +S GD EVQR
Sbjct: 194 KLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKA-GDREVQR 252
Query: 285 TMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDR 326
TMLELLNQLDGF+ + ++KV+ ATNR+DILD ALLR GR+DR
Sbjct: 253 TMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDR 294
Score = 60 (26.2 bits), Expect = 3.3e-53, Sum P(2) = 3.3e-53
Identities = 26/128 (20%), Positives = 53/128 (41%)
Query: 32 LRQYYLQHIHELQLQVRQKTHNLNRLEAQRNE---LNSRVRMLKEELQLLQEPGSYVGEV 88
++ L+ HELQ + N +++ + +++ + +L + +E G+ +
Sbjct: 20 MKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLD 79
Query: 89 VKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVN 148
+ GK V +K Y + P V + DSY++ LP++ D V
Sbjct: 80 SQRKGKCAV-IKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVK 138
Query: 149 LMK-VEKV 155
M+ VE +
Sbjct: 139 AMELVEAI 146
>WB|WBGene00010562 [details] [associations]
symbol:cdc-48.3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0007091
"metaphase/anaphase transition of mitotic cell cycle" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007067 "mitosis" evidence=IMP] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006469 "negative regulation of protein kinase activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0007052
GO:GO:0002119 GO:GO:0006469 GO:GO:0000003 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000223225 GeneTree:ENSGT00700000104502
GO:GO:0007091 EMBL:Z75712 KO:K13525 PIR:T23322 RefSeq:NP_492211.1
ProteinModelPortal:Q21222 SMR:Q21222 PaxDb:Q21222
EnsemblMetazoa:K04G2.3 GeneID:172586 KEGG:cel:CELE_K04G2.3
UCSC:K04G2.3 CTD:172586 WormBase:K04G2.3 InParanoid:Q21222
OMA:QVAPTIV NextBio:876139 Uniprot:Q21222
Length = 724
Score = 528 (190.9 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 120/262 (45%), Positives = 168/262 (64%)
Query: 154 KVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLAR 213
+VP+ +++ IGG ++ EI++ + P KHPE FE GI P G+LLYGPPG KTL+AR
Sbjct: 452 EVPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLYGPPGCSKTLIAR 511
Query: 214 AVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSAR-ME 272
A+A F+ V G EL K++G+ + +R+LF AR+ AP+I+F DEID++GS+R E
Sbjct: 512 ALASEAKMNFLAVKGPELFSKWVGDSEKAIRDLFSRARQVAPTIVFFDEIDAVGSSRGSE 571
Query: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
SG D R + +LL +LDG E S+++ +L ATNR D LD ALLRPGR+DR I
Sbjct: 572 KSSGVSD----RVLAQLLTELDGLEKSSRVILLAATNRPDQLDSALLRPGRLDRAIYVGL 627
Query: 333 PNEESRLDILKIHSRRMNL---MRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRER-R 388
P E +R IL++ +++M +R ID K+ EK +G SGAEL AVC A MFA+RE
Sbjct: 628 PCEVTRRAILEMRTKKMKFDDTVRTID--KLVEKTSGYSGAELVAVCRTAAMFAMRESID 685
Query: 389 IHVTQ-EDFEMAVAKVMKKETE 409
+ Q FE A+A V+ + TE
Sbjct: 686 ATIVQWTHFEQALAAVVSR-TE 706
Score = 37 (18.1 bits), Expect = 6.9e-53, Sum P(2) = 6.9e-53
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 65 NSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKV 97
+ + +LKE +L +Y+G ++M N V
Sbjct: 283 SGKTLLLKEVALVLSGSTTYIGSCEELMELNGV 315
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 525 (189.9 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
Identities = 105/263 (39%), Positives = 169/263 (64%)
Query: 151 KVEKVPDS--TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 208
K ++VP++ T+ + G DQ E++EV++ +K+P+ + +LG PKG LL GPPGTGK
Sbjct: 238 KFQEVPETGVTFGDVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGK 296
Query: 209 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 268
TLLARAVA F + SE V+ ++G G+ VR+LF A+ AP I+F+DEID++G
Sbjct: 297 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGR 356
Query: 269 ARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKI 328
R +G G G+ E ++T+ +LL ++DGF ++ + VL ATNR D+LD ALLRPGR DR++
Sbjct: 357 QR-GAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQV 415
Query: 329 EFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR 388
P+ R+ ILK+HSR + + +D +K+A + G +GA+L+ + EA + A R
Sbjct: 416 TVDRPDVAGRVQILKVHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEAAILAARREL 475
Query: 389 IHVTQEDFEMAVAKVMKKETEKN 411
+++++ A+ +++ +KN
Sbjct: 476 KEISKDEISDALERIIAGPEKKN 498
Score = 37 (18.1 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 392 TQEDFEMAVAKVMKKETEK 410
+Q+D+ MA A V+ E +
Sbjct: 634 SQKDYSMATADVVDAEVRE 652
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 107/246 (43%), Positives = 165/246 (67%)
Query: 159 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 218
T+D + G++ E+KE+++ ++ P+ F+ +G PKGVLL GPPGTGKTLLARAVA
Sbjct: 173 TFDDVAGMENPKMELKEIVDY-LRDPKKFQRIGGKVPKGVLLVGPPGTGKTLLARAVAGE 231
Query: 219 TDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNG 278
D TF+ +S S+ ++ ++G G+ VR+LF A++ APSIIF+DE+D++G +R +G G G
Sbjct: 232 ADVTFLSISASQFIEMFVGVGAGRVRDLFATAKKSAPSIIFIDELDAVGRSR-GAGLGGG 290
Query: 279 DSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR 338
E ++T+ +LL+++DGF++ +++ V+ ATNR D+LD ALLRPGR DR + P+ R
Sbjct: 291 HDEREQTLNQLLSEMDGFDSHDEVIVMAATNRPDVLDPALLRPGRFDRHVVIDRPDWRDR 350
Query: 339 LDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEM 398
IL +H+R++ L + +DL IA G +GA+L+ + EA + A RE VT E E
Sbjct: 351 EKILHVHTRKIPLDKDVDLAVIARGTPGMAGADLENLVNEAAILAARENAATVTMEHMER 410
Query: 399 AVAKVM 404
A KV+
Sbjct: 411 AKDKVL 416
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 544 (196.6 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 107/243 (44%), Positives = 169/243 (69%)
Query: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
E++ D YD +GG+ +Q+ +I+E++ELP++HP+LF+S+G+ PKG+LLYGPPG+GKTL+A
Sbjct: 199 ERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIA 258
Query: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
RAVA+ T F ++G E++ K GE +R+ F A ++APSIIF+DEIDSI R +
Sbjct: 259 RAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK 318
Query: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
+ NG+ E +R + +LL +DG ++ + V+ ATNR + +D AL R GR DR+I+
Sbjct: 319 T---NGEVE-RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGV 374
Query: 333 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVT 392
P+E RL++L+IH++ M L +DL++I++ +G GA+L A+CTEA + +RE+ +
Sbjct: 375 PDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVID 434
Query: 393 QED 395
ED
Sbjct: 435 LED 437
Score = 532 (192.3 bits), Expect = 8.1e-51, P = 8.1e-51
Identities = 105/261 (40%), Positives = 163/261 (62%)
Query: 126 VALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPE 185
+A+ N+ + H L + +P V +VP+ +++ IGGL+ +E++E ++ P++HPE
Sbjct: 448 MAVTNEHF--HTALGNS-NPSALRETVVEVPNVSWNDIGGLENVKRELQETVQYPVEHPE 504
Query: 186 LFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRE 245
FE G++ KGVL YGPPG GKTLLA+A+A+ FI V G EL+ + GE VRE
Sbjct: 505 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRE 564
Query: 246 LFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVL 305
+F AR+ AP ++F DE+DSI + R G+G R + +LL ++DG A + ++
Sbjct: 565 IFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVFII 624
Query: 306 MATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMN 365
ATNR DI+D ALLRPGR+D+ I P P+E+SRL+I K R+ + + +D+ +A+
Sbjct: 625 GATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQ 684
Query: 366 GASGAELKAVCTEAGMFALRE 386
G SGA++ +C A +A+RE
Sbjct: 685 GFSGADITEICQRACKYAIRE 705
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 111/254 (43%), Positives = 167/254 (65%)
Query: 159 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 218
T++ + G+D+ +E++E+I+ +K P+ F LG PKGVLL GPPGTGKTLLARAVA
Sbjct: 151 TFEDVAGVDEAKEELEEIIQF-LKDPKKFTKLGGRIPKGVLLVGPPGTGKTLLARAVAGE 209
Query: 219 TDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNG 278
F +SGS+ V+ ++G G+ VR+LFV +++AP IIF+DEID++G R +G G G
Sbjct: 210 AGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFIDEIDAVGRHR-GAGLGGG 268
Query: 279 DSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR 338
E ++T+ +LL ++DGFE++ + ++ ATNR D+LD ALLRPGR DR++ P P+ + R
Sbjct: 269 HDEREQTLNQLLVEMDGFESNEGVILIAATNRPDVLDPALLRPGRFDRQVVVPQPDVKGR 328
Query: 339 LDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEM 398
ILK+H+++ L +DL IA G SGA+L V EA + A R+ + V +DF+
Sbjct: 329 EMILKVHTKKTPLASDVDLGVIARGTPGFSGADLSNVVNEAALLAARKDKSFVEMKDFDD 388
Query: 399 AVAKVMKKETEKNM 412
A KV+ ++M
Sbjct: 389 AKDKVLMGVERRSM 402
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 540 (195.1 bits), Expect = 1.0e-51, P = 1.0e-51
Identities = 106/243 (43%), Positives = 169/243 (69%)
Query: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
E++ + YD +GG+ +Q+ +I+E++ELP++HP+LF+S+G+ PKG+LLYGPPG+GKTL+A
Sbjct: 199 ERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIA 258
Query: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
RAVA+ T F ++G E++ K GE +R+ F A ++APSIIF+DEIDSI R +
Sbjct: 259 RAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK 318
Query: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
+ NG+ E +R + +LL +DG ++ + V+ ATNR + +D AL R GR DR+I+
Sbjct: 319 T---NGEVE-RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGV 374
Query: 333 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVT 392
P+E RL++L+IH++ M L +DL++I++ +G GA+L A+CTEA + +RE+ +
Sbjct: 375 PDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVID 434
Query: 393 QED 395
ED
Sbjct: 435 LED 437
Score = 523 (189.2 bits), Expect = 8.5e-50, P = 8.5e-50
Identities = 105/261 (40%), Positives = 164/261 (62%)
Query: 126 VALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPE 185
+A+ N+ + H L + +P V +VP+ +++ IGGL+ +E++E ++ P++HPE
Sbjct: 448 MAVSNEHF--HTALGNS-NPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPE 504
Query: 186 LFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRE 245
FE G++ KGVL YGPPG GKTLLA+A+A+ FI V G EL+ + GE VRE
Sbjct: 505 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRE 564
Query: 246 LFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVL 305
+F AR+ AP ++F DE+DSI + R S +G+ R + +LL ++DG A + ++
Sbjct: 565 IFDKARQSAPCVLFFDELDSIATQRGNS-AGDAGGAADRVLNQLLTEMDGMNAKKTVFII 623
Query: 306 MATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMN 365
ATNR DI+D ALLRPGR+D+ I P P+E+SRL+I K R+ + + +D+ +A+
Sbjct: 624 GATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQ 683
Query: 366 GASGAELKAVCTEAGMFALRE 386
G SGA++ +C A +A+RE
Sbjct: 684 GFSGADITEICQRACKYAIRE 704
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 520 (188.1 bits), Expect = 1.4e-51, Sum P(2) = 1.4e-51
Identities = 115/271 (42%), Positives = 169/271 (62%)
Query: 123 STRVALRNDSYVLHLILPSKVDPLVNLMKV---EKVPDS----TYDMIGGLDQQIKEIKE 175
ST +N++ + I + +NL K+ K DS TYDMIGGL+ Q+K I+E
Sbjct: 311 STSAGAKNNTDTFYFISSTT---RINLRKICTNSKEQDSQFKVTYDMIGGLNSQLKAIRE 367
Query: 176 VIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKY 235
+IELP+K PELF+S GI P+G+LLYGPPGTGKT++ARAVA+ ++G E++ K+
Sbjct: 368 IIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKF 427
Query: 236 IGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDG 295
GE +R++F A PSIIF+DE+D++ R E + V ++L L++ +
Sbjct: 428 YGETEARLRQIFAEATLRHPSIIFIDELDALCPKR-EGAQSEVEKRVVASLLTLMDGIGS 486
Query: 296 FEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRM-NLMRG 354
+ ++ VL ATNR LD AL RPGR D++IE PN + RLDIL+ RR+ +L+
Sbjct: 487 EGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLRRVPHLLTK 546
Query: 355 IDLKKIAEKMNGASGAELKAVCTEAGMFALR 385
+L ++A +G GA+LKA+C EAG++ALR
Sbjct: 547 AELLRLANNAHGYVGADLKALCNEAGLYALR 577
Score = 377 (137.8 bits), Expect = 8.5e-36, Sum P(2) = 8.5e-36
Identities = 74/165 (44%), Positives = 109/165 (66%)
Query: 155 VPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 214
VP+ ++ IGGL+ ++K+ +E P+KHP+ F +GI PKGVLLYGPPG KT++A+A
Sbjct: 621 VPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFSRMGIQPPKGVLLYGPPGCSKTMIAKA 680
Query: 215 VAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESG 274
+A+ + F+ + G EL+ KY+GE R VRE+F AR APSIIF DE+D++ +E G
Sbjct: 681 LANESGLNFLAIKGPELMNKYVGESERAVREVFRKARAVAPSIIFFDELDALA---VERG 737
Query: 275 SGNGDSEV-QRTMLELLNQLDGFEASNKIKVLMATNRIDILDQAL 318
S +G V R + +LL ++DG E + VL ATNR D +D+ +
Sbjct: 738 SSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRIDKII 782
Score = 44 (20.5 bits), Expect = 1.4e-51, Sum P(2) = 1.4e-51
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 374 AVCTEAGMFALRE--RRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
AVC EA + AL E + + + F A++ V + E SLR+ ++
Sbjct: 783 AVCKEAALLALEENIKADCIMKRHFTQALSIVTPRIPE---SLRRFYE 827
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 110/254 (43%), Positives = 162/254 (63%)
Query: 159 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 218
T+D + G+D+ +E+KE++E ++ P F+ LG P GVLL GPPGTGKTLLA+AVA
Sbjct: 154 TFDDVAGVDEAKEEVKELVEF-LRDPGKFQRLGGKMPCGVLLVGPPGTGKTLLAKAVAGE 212
Query: 219 TDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNG 278
F +SGS+ V+ ++G G+ VR++F A++ AP IIF+DEID++G R +G G G
Sbjct: 213 AKVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKQAPCIIFIDEIDAVGRHR-GAGLGGG 271
Query: 279 DSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR 338
E ++T+ +LL ++DGFE I V+ ATNR D+LD ALLRPGR DR++ P P+ + R
Sbjct: 272 HDEREQTLNQLLVEMDGFEGKEGIIVMAATNRPDVLDPALLRPGRFDRQVVVPLPDIKGR 331
Query: 339 LDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEM 398
ILK+H ++ L + + IA G SGA+L + EA +FA RE + V+ +FE
Sbjct: 332 EYILKVHMNKLPLAKDVKASVIARGTPGFSGADLANIVNEAALFAARENKKDVSMSEFER 391
Query: 399 AVAKVMKKETEKNM 412
A K+M ++M
Sbjct: 392 AKDKIMMGAERRSM 405
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 107/256 (41%), Positives = 167/256 (65%)
Query: 151 KVEKVPDS--TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 208
K + P++ T+D + G+D+ ++ EV+E +K PE F ++G PKGVLL GPPGTGK
Sbjct: 208 KFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGK 266
Query: 209 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 268
TLLA+A+A F +SGSE V+ ++G G+ VR+LF A+E+AP I+F+DEID++G
Sbjct: 267 TLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGR 326
Query: 269 ARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKI 328
R +G G G+ E ++T+ +LL ++DGFE + + V+ ATNR DILD ALLRPGR DR++
Sbjct: 327 QR-GTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQV 385
Query: 329 EFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR 388
P+ + R DILK+HS G+ L+ IA + G SGA+L + EA + A R +
Sbjct: 386 SVDVPDVKGRTDILKVHSGNKKFESGVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGK 445
Query: 389 IHVTQEDFEMAVAKVM 404
++ ++ + ++ +++
Sbjct: 446 TAISSKEIDDSIDRIV 461
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 535 (193.4 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 106/259 (40%), Positives = 176/259 (67%)
Query: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
E++ + YD +GG+ +Q+ +I+E++ELP++HP+LF+S+G+ PKG+LLYGPPG+GKTL+A
Sbjct: 200 ERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIA 259
Query: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
RAVA+ T F ++G E++ K GE +R+ F A ++APSIIF+DEIDSI R +
Sbjct: 260 RAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK 319
Query: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
+ +G+ E +R + +LL +DG ++ + V+ ATNR + +D AL R GR DR+I+
Sbjct: 320 T---HGEVE-RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGV 375
Query: 333 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVT 392
P+E RL++L+IH++ M L +DL+++++ +G GA+L A+CTEA + +RE+ +
Sbjct: 376 PDEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVID 435
Query: 393 QEDFEMAVAKVMKKETEKN 411
+D E+ A+++ N
Sbjct: 436 LDDEEID-AEILNSMAVSN 453
Score = 518 (187.4 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 107/288 (37%), Positives = 172/288 (59%)
Query: 126 VALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPE 185
+A+ ND + L +P V +VP+ +++ IGGL+ +E++E ++ P++HPE
Sbjct: 449 MAVSNDHFQTAL---GNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPE 505
Query: 186 LFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRE 245
FE G++ KGVL YGPPG GKTLLA+A+A+ FI + G EL+ + GE VRE
Sbjct: 506 KFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRE 565
Query: 246 LFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVL 305
+F AR+ AP ++F DE+DSI + R S G+ R + +LL ++DG A + ++
Sbjct: 566 IFDKARQSAPCVLFFDELDSIATQRGNS-VGDAGGAADRVLNQLLTEMDGMNAKKTVFII 624
Query: 306 MATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMN 365
ATNR DI+D ALLRPGR+D+ I P P+EESR I K R+ + + +DL+ +A+
Sbjct: 625 GATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQ 684
Query: 366 GASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMS 413
G SGA++ +C + +A+RE +++ + A + +E E+ ++
Sbjct: 685 GFSGADITEICQRSCKYAIRENIEKDIEKERKRAESPEAMEEDEEEIA 732
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 106/256 (41%), Positives = 166/256 (64%)
Query: 151 KVEKVPDS--TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 208
K + P++ T+D + G+D+ ++ EV+E +K PE F ++G PKGVLL GPPGTGK
Sbjct: 215 KFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGAKIPKGVLLIGPPGTGK 273
Query: 209 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 268
TLLA+A+A F +SGSE V+ ++G G+ VR+LF A+E+AP I+F+DEID++G
Sbjct: 274 TLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGR 333
Query: 269 ARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKI 328
R +G G G+ E ++T+ +LL ++DGFE + + V+ ATNR DILD ALLRPGR DR++
Sbjct: 334 QR-GTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQV 392
Query: 329 EFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR 388
P+ + R DILK+H+ + L+ IA + G SGA+L + EA + A R R
Sbjct: 393 SVDVPDVKGRTDILKVHAGNKKFDNDVSLEIIAMRTPGFSGADLANLLNEAAILAGRRAR 452
Query: 389 IHVTQEDFEMAVAKVM 404
++ ++ + ++ +++
Sbjct: 453 TSISSKEIDDSIDRIV 468
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 531 (192.0 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 112/255 (43%), Positives = 157/255 (61%)
Query: 156 PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAV 215
P+ + IGG ++ +++KE +E P+ H E F LG+ PKGVLLYGPPG KT+ A+A+
Sbjct: 543 PNVHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAI 602
Query: 216 AHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGS 275
A T FI V G EL K++GE R VR++F AR+ +PS+IF DEID++ + R E S
Sbjct: 603 ATETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQASPSVIFFDEIDALTANRGEDNS 662
Query: 276 GNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNE 335
+ R + LLN+LDG EA + VL ATNR D++D AL+RPGR+DR + PN
Sbjct: 663 SD------RVVAALLNELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNF 716
Query: 336 ESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE--RRIHVTQ 393
E+R I+KI + +M +DL IAEK G SGAE+ A+C EAG+ A+ E + Q
Sbjct: 717 EARKQIVKIQAEKMKFAEDVDLDLIAEKTEGCSGAEVVALCQEAGLIAMHEDLEAKEICQ 776
Query: 394 EDFEMAVAKVMKKET 408
F+ A+ + K T
Sbjct: 777 AHFKTALLALRKAIT 791
Score = 461 (167.3 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 101/238 (42%), Positives = 152/238 (63%)
Query: 159 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 218
T+ IGGL QI +I++++ELP ++PELF+ I P+GVLLYGPPGTGKT++ RAVA
Sbjct: 277 TFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAE 336
Query: 219 TDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNG 278
+ + G +V KY+GE +R++F AR H PSIIF+DEID++ R E S
Sbjct: 337 ANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKRTEDVS--- 393
Query: 279 DSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR 338
++E R + LL LDG + K+ V+ ATNR + +D+AL RPGR++++IE P++ +R
Sbjct: 394 EAE-SRAVATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSAR 452
Query: 339 LDILKIH-SRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQED 395
LDI+K+ S N + L+ +A + + GA+L AV EA + A++ R I + Q+D
Sbjct: 453 LDIIKLLLSGVPNEINDAQLEDLASRTHAYVGADLAAVVREAALRAIK-RTISL-QKD 508
>TIGR_CMR|CJE_1259 [details] [associations]
symbol:CJE_1259 "cell division protein FtsH"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
OMA:RARASMP RefSeq:YP_179247.1 ProteinModelPortal:Q5HTY8 SMR:Q5HTY8
STRING:Q5HTY8 GeneID:3231766 KEGG:cjr:CJE1259 PATRIC:20044314
ProtClustDB:CLSK872348 BioCyc:CJEJ195099:GJC0-1285-MONOMER
Uniprot:Q5HTY8
Length = 645
Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
Identities = 111/274 (40%), Positives = 173/274 (63%)
Query: 149 LMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 208
L+ EK P + + G+++ +E+KE+++ +K+PE + LG PKG+LL GPPGTGK
Sbjct: 167 LVNSEK-PKVKFSDVAGVEEAKEEVKEIVDF-LKYPERYIKLGAKIPKGLLLVGPPGTGK 224
Query: 209 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 268
TLLA+AVA D F VSGS ++ ++G G+ VR+LF A++ AP+I+F+DEID+IG
Sbjct: 225 TLLAKAVAGEADVPFFSVSGSSFIEMFVGVGASRVRDLFENAKKEAPAIVFIDEIDAIGK 284
Query: 269 ARMESGSGNGDSEVQRTMLELLNQLDGFEA-SNKIKVLMATNRIDILDQALLRPGRIDRK 327
+R SG G+ E ++T+ +LL ++DGF S+ + VL ATNR ++LD ALLRPGR DR+
Sbjct: 285 SRAASGMMGGNDEREQTLNQLLAEMDGFGTESSPVIVLAATNRPEVLDAALLRPGRFDRQ 344
Query: 328 IEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRER 387
+ P+ + R DILK+H + + + + ++ IA G +GA+L + EA + A R+
Sbjct: 345 VLVDKPDFKGRCDILKVHMKDVKISPKVKVEDIARLTAGLAGADLANIINEAALLAGRDS 404
Query: 388 RIHVTQEDF----EMAVAKVMKKETEKNMSLRKL 417
+ +V Q D E A+A + KK N +K+
Sbjct: 405 KKYVEQNDLVEAVERAIAGLEKKSRRINEKEKKI 438
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 110/263 (41%), Positives = 168/263 (63%)
Query: 149 LMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 208
L ++K P T+ + G+D+ +E+ EV+E +K E F++LG PKG+LL GPPGTGK
Sbjct: 148 LFNMDK-PTITFANVAGVDEAKQEVGEVVEF-LKSREKFQALGARIPKGILLIGPPGTGK 205
Query: 209 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 268
TLLA+A+A F +SGSE V+ ++G G+ VR+LF A+++AP IIF+DEID++G
Sbjct: 206 TLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKKNAPCIIFIDEIDAVGR 265
Query: 269 ARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKI 328
R +G G G E ++T+ ++L ++DGF+ + V+ ATNR DILD ALLRPGR DR++
Sbjct: 266 QR-GAGLGGGHDEREQTLNQILVEMDGFDTDTSVIVIAATNRPDILDPALLRPGRFDRRV 324
Query: 329 EFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR 388
P+ R ILKIH++ L ++L+ +A++ G SGA+L + EA + A R+ R
Sbjct: 325 VLDKPDITGREAILKIHAKGKPLADTVNLENLAKQTVGFSGADLANLLNEAAILAARKNR 384
Query: 389 IHVTQEDFEMAVAKVMKKETEKN 411
V ED E ++ +V+ K+
Sbjct: 385 KVVETEDLEESIDRVIAGPERKS 407
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 103/245 (42%), Positives = 160/245 (65%)
Query: 160 YDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 219
+D + G+D+ +E++EV+ +K PE F ++G PKGVLL GPPGTGKTLLA+A+A
Sbjct: 171 FDDVAGIDEAKEELQEVVTF-LKQPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEA 229
Query: 220 DCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGD 279
F +SGSE V+ ++G G+ VR+LF A+E+AP +IF+DEID++G R +G G G+
Sbjct: 230 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQR-GAGIGGGN 288
Query: 280 SEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRL 339
E ++T+ +LL ++DGFE + I ++ ATNR D+LD AL+RPGR DR++ P+ R
Sbjct: 289 DEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRK 348
Query: 340 DILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMA 399
+IL++H+R L + + IA + G SGA+L + EA + R R+ +T + + A
Sbjct: 349 EILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSAITLLEIDDA 408
Query: 400 VAKVM 404
V +V+
Sbjct: 409 VDRVV 413
>DICTYBASE|DDB_G0282241 [details] [associations]
symbol:DDB_G0282241 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
Length = 825
Score = 511 (184.9 bits), Expect = 4.0e-50, Sum P(2) = 4.0e-50
Identities = 105/263 (39%), Positives = 167/263 (63%)
Query: 152 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLL 211
VE + + ++D IGGLD +E+++ IE P + E FE G++ PKG++LYGPPG KT L
Sbjct: 561 VENISNVSWDDIGGLDDIKEELRQAIEWPNLYKESFEKFGLSPPKGIILYGPPGCSKTTL 620
Query: 212 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARM 271
+AVA + +F+ +SG+ + Y+G+ + +R++F AR+ PSI+F DEID+I S R
Sbjct: 621 VKAVASSSKLSFLSLSGATIFSPYLGDSEQTIRDIFKKARQTTPSILFFDEIDAIVSKRN 680
Query: 272 ESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFP 331
S + +GD+ R + LN++DG E N + V+ ATNR+D++D ALLRPGR D+ +E
Sbjct: 681 LSDNSSGDNAQSRVLSTFLNEMDGVEQLNGVIVIGATNRLDMIDNALLRPGRFDKILEIK 740
Query: 332 NPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIH- 390
P++ SRL ILKI ++ + L ++L +I+ NG SGA+L+ +C EA +LR ++
Sbjct: 741 LPDQLSRLKILKIKTKSIPLSDNVNLIEISNLTNGFSGADLENLCREASFQSLRRDLLNG 800
Query: 391 -VTQEDFEMAVAKVMKKETEKNM 412
V DF ++K+ + KN+
Sbjct: 801 FVEMYDFLNCLSKINNQS--KNL 821
Score = 382 (139.5 bits), Expect = 2.3e-34, P = 2.3e-34
Identities = 92/243 (37%), Positives = 144/243 (59%)
Query: 149 LMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 208
L K K+ ++ IGGL++QIK ++E++ PI P++F++L I PKG+LL GPPGTGK
Sbjct: 275 LFKKFKLNNNNNFKIGGLNEQIKLLEEMMIYPILFPQVFKTLNIDPPKGILLKGPPGTGK 334
Query: 209 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFV------MAREHAPSIIFMDE 262
T L R V D I + +++ YIGE +R +F +A+ ++P ++F+DE
Sbjct: 335 THLVRTVCDAYDIEMISIDCAKISGSYIGETEENLRNIFQEASDKSIAKSNSPIVVFIDE 394
Query: 263 IDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPG 322
ID+I R S S +S V L LL+ + G N I ++ ATNR + +D AL RPG
Sbjct: 395 IDTICPPR--SKSTQNESRVVGQFLTLLDGI-GARKGNLI-IIAATNRPNQIDNALRRPG 450
Query: 323 RIDRKIEFPNPNEESRLDILKIHSRRMNLMRGID--LKKIAEKMNGASGAELKAVCTEAG 380
R+DR+IE P PN++ RLDILK++ ++ + L +IA++ G GA ++ +C ++
Sbjct: 451 RLDREIEIPVPNKQQRLDILKLYCSKLPISPTPSNLLDQIADETVGYVGANIQFLCRDSA 510
Query: 381 MFA 383
A
Sbjct: 511 FIA 513
Score = 39 (18.8 bits), Expect = 4.0e-50, Sum P(2) = 4.0e-50
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 30 EGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQE 80
E L Y + L L + K + + N N ++ L E+++LL+E
Sbjct: 253 ESLSCLYSSNSSNL-LNLNYKNKLFKKFKLNNNN-NFKIGGLNEQIKLLEE 301
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 524 (189.5 bits), Expect = 4.4e-50, P = 4.4e-50
Identities = 113/258 (43%), Positives = 167/258 (64%)
Query: 159 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 218
TYDMIGGL+ Q+KEI+E+IELP+K PELF+S GI+ P+GVLLYGPPGTGKT++ARAVA+
Sbjct: 345 TYDMIGGLNSQLKEIREIIELPLKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVANE 404
Query: 219 TDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNG 278
++G E++ K+ GE +R++F A PSIIF+DE+D++ R E
Sbjct: 405 VGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR-EGAQNEV 463
Query: 279 DSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR 338
+ V ++L L++ + + ++ VL ATNR LD AL RPGR D++IE PN + R
Sbjct: 464 EKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDR 523
Query: 339 LDILKIHSRRM-NLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE-RRIHVTQEDF 396
LDIL+ RR+ +L+ +L ++A +G GA+LKA+C EAG++ALR R D
Sbjct: 524 LDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLYALRRVLRKQPNLPDS 583
Query: 397 EMA-VAKVMKKETEKNMS 413
++A + K+ K+ + M+
Sbjct: 584 KVAGLVKITLKDFLQGMN 601
Score = 391 (142.7 bits), Expect = 2.0e-35, P = 2.0e-35
Identities = 77/167 (46%), Positives = 111/167 (66%)
Query: 155 VPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 214
VP+ ++ IGGL+ ++K+ +E P+KHPE F +GI PKGVLLYGPPG KT++A+A
Sbjct: 615 VPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAKA 674
Query: 215 VAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESG 274
+A+ + F+ + G EL+ KY+GE R VRE+F AR APSIIF DE+D++ +E G
Sbjct: 675 LANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELDALA---VERG 731
Query: 275 SGNGDSEV-QRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLR 320
S +G V R + +LL ++DG E + +L ATNR D +D+ LLR
Sbjct: 732 SSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKELLR 778
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 108/259 (41%), Positives = 168/259 (64%)
Query: 159 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 218
T+D + G+++ +E+ E+++ +KH + F LG PKG LL G PGTGKTLLARA+A
Sbjct: 156 TFDDVAGIEEAKEELIEIVDF-LKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 214
Query: 219 TDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNG 278
+ F +SGS+ V+ ++G G+ VR++F ++HAP IIF+DEID++G R G G G
Sbjct: 215 ANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHR-GIGLGGG 273
Query: 279 DSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR 338
+ E ++T+ +LL ++DGFE++ + ++ ATNR D+LD ALLRPGR DR++ P+ R
Sbjct: 274 NDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTISIPDINGR 333
Query: 339 LDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALR-ERRIHVTQEDFE 397
I+ +H++++ L +DL+ IA G SGA+L + EA + A R +++I VT DFE
Sbjct: 334 EKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAARLDKKI-VTMCDFE 392
Query: 398 MAVAKVMKKETEKNMSLRK 416
A KVM K+M +R+
Sbjct: 393 YARDKVMMGAERKSMVMRE 411
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 108/259 (41%), Positives = 168/259 (64%)
Query: 159 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 218
T+D + G+++ +E+ E+++ +KH + F LG PKG LL G PGTGKTLLARA+A
Sbjct: 156 TFDDVAGIEEAKEELIEIVDF-LKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 214
Query: 219 TDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNG 278
+ F +SGS+ V+ ++G G+ VR++F ++HAP IIF+DEID++G R G G G
Sbjct: 215 ANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEIDAVGRHR-GIGLGGG 273
Query: 279 DSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR 338
+ E ++T+ +LL ++DGFE++ + ++ ATNR D+LD ALLRPGR DR++ P+ R
Sbjct: 274 NDEREQTLNQLLVEMDGFESNEGVVIIAATNRPDVLDPALLRPGRFDRQVTISIPDINGR 333
Query: 339 LDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALR-ERRIHVTQEDFE 397
I+ +H++++ L +DL+ IA G SGA+L + EA + A R +++I VT DFE
Sbjct: 334 EKIIAVHAKKVPLAPDVDLRVIARGTPGFSGADLANLVNEAALIAARLDKKI-VTMCDFE 392
Query: 398 MAVAKVMKKETEKNMSLRK 416
A KVM K+M +R+
Sbjct: 393 YARDKVMMGAERKSMVMRE 411
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 525 (189.9 bits), Expect = 5.7e-50, P = 5.7e-50
Identities = 104/250 (41%), Positives = 169/250 (67%)
Query: 138 ILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKG 197
I+ S+ +P+ + + + YD IGG +Q+ +I+E++ELP++HP+LF+S+GI P+G
Sbjct: 202 IIHSEGEPIQREDEENNLNEVGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRG 261
Query: 198 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 257
+L+YGPPGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F A +++P+I
Sbjct: 262 ILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAI 321
Query: 258 IFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQA 317
IF+DEIDSI R ++ NG+ E +R + +LL +DG +A + + V+ ATNR + +D A
Sbjct: 322 IFIDEIDSIAPKREKT---NGEVE-RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPA 377
Query: 318 LLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCT 377
L R GR DR+++ P+ RL+IL IH++ M L +DL+ IA + +G G++L ++C+
Sbjct: 378 LRRFGRFDREVDIGIPDPTGRLEILSIHTKNMKLGEDVDLETIAAETHGYVGSDLASLCS 437
Query: 378 EAGMFALRER 387
EA M +RE+
Sbjct: 438 EAAMQQIREK 447
Score = 481 (174.4 bits), Expect = 4.0e-45, P = 4.0e-45
Identities = 108/290 (37%), Positives = 169/290 (58%)
Query: 123 STRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIK 182
S V + N Y L + PS + + V +VP+ ++ IGGL++ +E+ E ++ P+
Sbjct: 465 SLGVTMENFRYALGVSNPSALREVA----VVEVPNVRWEDIGGLEEVKRELIESVQYPVD 520
Query: 183 HPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRM 242
HPE F+ G++ +GVL YGPPGTGKT+LA+AVA+ FI V G EL+ + GE
Sbjct: 521 HPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESN 580
Query: 243 VRELFVMAREHAPSIIFMDEIDSIGSARMES-GSGNGDSEVQRTMLELLNQLDGFEASNK 301
+R++F AR AP ++F+DE+DSI +R S G G S+ R + +LL ++DG +
Sbjct: 581 IRDIFDKARAAAPCVVFLDELDSIAKSRGGSVGDAGGASD--RVVNQLLTEMDGMTSKKN 638
Query: 302 IKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIA 361
+ V+ ATNR + LD AL+RPGR+D + P P++ SR ILK R+ + +D++ IA
Sbjct: 639 VFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQASREGILKAQLRKTPVASDVDIEFIA 698
Query: 362 EKMNGASGAELKAVCTEAGMFALRER-RIHVTQEDFEMAVAKVMKKETEK 410
K +G SGA+L V A A++E + ++ A + +K E E+
Sbjct: 699 SKTHGFSGADLGFVTQRAVKLAIKESISAEIERQKQREAAGEDVKMEDEE 748
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 522 (188.8 bits), Expect = 6.7e-50, P = 6.7e-50
Identities = 114/258 (44%), Positives = 165/258 (63%)
Query: 159 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 218
TYDMIGGL+ Q+KEI+E+IELP+K PELF+S GI P+GVLLYGPPGTGKT++ARAVA+
Sbjct: 342 TYDMIGGLNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVANE 401
Query: 219 TDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNG 278
++G E++ K+ GE +R++F A PSIIF+DE+D++ R E
Sbjct: 402 VGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR-EGAQNEV 460
Query: 279 DSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR 338
+ V ++L L++ + + ++ VL ATNR LD AL RPGR D++IE PN + R
Sbjct: 461 EKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDR 520
Query: 339 LDILKIHSRRM-NLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE-RRIHVTQEDF 396
LDIL+ RR+ +L+ +L ++A +G GA+LKA+C EAG+ ALR R D
Sbjct: 521 LDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLHALRRVLRRQPNLPDS 580
Query: 397 EMA-VAKVMKKETEKNMS 413
+MA + K+ K+ + M+
Sbjct: 581 KMAGLVKITLKDFLQGMN 598
Score = 381 (139.2 bits), Expect = 2.4e-34, P = 2.4e-34
Identities = 74/163 (45%), Positives = 108/163 (66%)
Query: 155 VPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 214
VP+ ++ IGGL+ ++K+ +E P+KHPE F +GI PKGVLLYGPPG KT++A+A
Sbjct: 612 VPNVSWSDIGGLENVKLKLKQAVEWPLKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAKA 671
Query: 215 VAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESG 274
+A+ + F+ + G EL+ KY+GE R VRE+F AR APSIIF DE+D++ +E G
Sbjct: 672 LANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELDALA---VERG 728
Query: 275 SGNGDSEV-QRTMLELLNQLDGFEASNKIKVLMATNRIDILDQ 316
S +G V R + +LL ++DG E + +L ATNR D +D+
Sbjct: 729 SSSGAGNVADRVLAQLLTEMDGIEQLKNVTILAATNRPDRIDK 771
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 524 (189.5 bits), Expect = 6.8e-50, P = 6.8e-50
Identities = 102/239 (42%), Positives = 166/239 (69%)
Query: 160 YDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 219
YD IGG +Q+ +I+E++ELP++HP+LF+S+GI P+G+L+YGPPGTGKTL+ARAVA+ T
Sbjct: 223 YDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANET 282
Query: 220 DCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGD 279
F ++G E++ K GE +R+ F A +++P+IIF+DEIDSI R ++ NG+
Sbjct: 283 GAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKT---NGE 339
Query: 280 SEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRL 339
E +R + +LL +DG +A + + V+ ATNR + +D AL R GR DR+++ P+ RL
Sbjct: 340 VE-RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGRL 398
Query: 340 DILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEM 398
+IL+IH++ M L +DL++IA + +G G++L ++C+EA M +RE+ + ++ E+
Sbjct: 399 EILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDEDEI 457
Score = 479 (173.7 bits), Expect = 6.4e-45, P = 6.4e-45
Identities = 114/334 (34%), Positives = 184/334 (55%)
Query: 56 RLEAQRNELNSRVRMLKEELQLLQ---EPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXX 112
RLE R ++++ L +++ L Q E YVG + + + ++ E ++
Sbjct: 397 RLEILR--IHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIR-EKMDMIDLD 453
Query: 113 XXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKE 172
S V + N + L PS + V VE VP+ ++ IGGL++ +E
Sbjct: 454 EDEIDAEVLDSLGVTMDNFRFALGSSNPSALRETV----VE-VPNVRWEDIGGLEEVKRE 508
Query: 173 IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV 232
++E +++P+ + E F G+ KGVL +GPPGTGKTLLA+A+A+ FI V G EL+
Sbjct: 509 LRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELL 568
Query: 233 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQ 292
+ GE VR++F AR AP ++F+DE+DSI AR S +G + R + +LL +
Sbjct: 569 SMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKARGASAGDSGGGD--RVVNQLLTE 626
Query: 293 LDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLM 352
+DG + + V+ ATNR D +D AL+RPGR+D+ I P P+EE+R IL+ R +
Sbjct: 627 MDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVA 686
Query: 353 RGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
+DL+ +A+ +G SGA+L+ V A A+++
Sbjct: 687 EDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKD 720
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 524 (189.5 bits), Expect = 7.2e-50, P = 7.2e-50
Identities = 103/228 (45%), Positives = 161/228 (70%)
Query: 160 YDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 219
YD IGG +Q+ +I+E++ELP++HP+LF+S+GI P+GVLLYGPPGTGKTL+ARAVA+ T
Sbjct: 221 YDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVANET 280
Query: 220 DCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGD 279
F ++G E++ K GE +R+ F A +++P+IIF+DEIDSI R ++ NG+
Sbjct: 281 GAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKT---NGE 337
Query: 280 SEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRL 339
E +R + +LL +DG +A + + V+ ATNR + +D AL R GR DR+++ P+ RL
Sbjct: 338 VE-RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRL 396
Query: 340 DILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRER 387
+IL+IH++ M L +DL++IA + +G G+++ A+C+EA M +RE+
Sbjct: 397 EILQIHTKNMKLGDDVDLEQIAAETHGYVGSDVAALCSEAAMQQIREK 444
Score = 491 (177.9 bits), Expect = 3.2e-46, P = 3.2e-46
Identities = 114/312 (36%), Positives = 172/312 (55%)
Query: 76 QLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVL 135
Q+ E YVG V + + ++ E ++ S V + N + L
Sbjct: 416 QIAAETHGYVGSDVAALCSEAAMQQIR-EKMDLIDLDEDTIDAEVLDSLGVTMENFRFAL 474
Query: 136 HLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQP 195
+ PS + + V +VP+ ++ IGGLD+ ++++E ++ P+ HPE F G++
Sbjct: 475 GVSNPSALREVA----VVEVPNVRWEDIGGLDEVKQDLREQVQYPVDHPEKFLKFGLSPS 530
Query: 196 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAP 255
+GVL YGPPGTGKT+LA+AVA+ FI V G EL+ + GE +R++F AR AP
Sbjct: 531 RGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAP 590
Query: 256 SIIFMDEIDSIGSARMES-GSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDIL 314
I+F+DE+DSI AR S G G S+ R + +LL ++DG + + V+ ATNR + L
Sbjct: 591 CIVFLDELDSIAKARGGSVGDAGGASD--RVVNQLLTEMDGMTSKKNVFVIGATNRPEQL 648
Query: 315 DQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKA 374
D AL RPGR+D I P P+E RL ILK R+ + +DL+ IA K +G SGA+L
Sbjct: 649 DPALCRPGRLDSLIYVPLPDELGRLSILKAQLRKTPVSDDVDLQYIANKTHGFSGADLGF 708
Query: 375 VCTEAGMFALRE 386
+ A A++E
Sbjct: 709 ITQRAVKIAIKE 720
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 523 (189.2 bits), Expect = 8.1e-50, P = 8.1e-50
Identities = 105/258 (40%), Positives = 172/258 (66%)
Query: 138 ILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKG 197
I+ + +P+ + E + D YD IGG +Q+ +IKE++ELP++HP LF+++G+ P+G
Sbjct: 183 IIHCEGEPIKREDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG 242
Query: 198 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 257
+LLYGPPGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F A ++AP+I
Sbjct: 243 ILLYGPPGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI 302
Query: 258 IFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQA 317
IF+DE+D+I R ++ +G+ E +R + +LL +DG + + V+ ATNR + +D A
Sbjct: 303 IFIDELDAIAPKREKT---HGEVE-RRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAA 358
Query: 318 LLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCT 377
L R GR DR+I+ P+ RL+IL+IH++ M L +DL++I+ + +G GA+L A+C+
Sbjct: 359 LRRFGRFDREIDIGIPDSTGRLEILQIHTKNMKLSEDVDLEQISAETHGHVGADLAALCS 418
Query: 378 EAGMFALRERRIHVTQED 395
EA + A+R++ + ED
Sbjct: 419 EAALQAIRKKMTLIDLED 436
Score = 478 (173.3 bits), Expect = 7.7e-45, P = 7.7e-45
Identities = 94/246 (38%), Positives = 151/246 (61%)
Query: 141 SKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLL 200
S+ +P V +VP ++ IGGLD+ +E++E+++ P+++P+ F G+ +GVL
Sbjct: 459 SQSNPSALRETVVEVPHVNWEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLF 518
Query: 201 YGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM 260
YGPPG GKTLLA+A+A+ F+ + G EL+ + GE VR++F AR+ AP I+F
Sbjct: 519 YGPPGCGKTLLAKAIANECQANFVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFF 578
Query: 261 DEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLR 320
DE+DSI AR G+G+ R + ++L ++DG + ++ ATNR DI+D A+LR
Sbjct: 579 DELDSIAKAR-GGGAGDAGGAADRVINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILR 637
Query: 321 PGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAG 380
PGR+D+ I P P+ SR IL+ + R+ + + +DL +++ G SGA+L +C A
Sbjct: 638 PGRLDQLIYIPLPDMPSRTAILRANLRKSPVAKDVDLMYLSKITEGFSGADLTEICQRAC 697
Query: 381 MFALRE 386
A+RE
Sbjct: 698 KLAIRE 703
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 523 (189.2 bits), Expect = 8.1e-50, P = 8.1e-50
Identities = 102/246 (41%), Positives = 156/246 (63%)
Query: 141 SKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLL 200
S+ +P V +VP+ T++ IGGLD +E++E+++ P++HP+ F G+ KGVL
Sbjct: 457 SQSNPSALRETVVEVPNITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLF 516
Query: 201 YGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM 260
YGPPG GKTLLA+A+A+ FI + G EL+ + GE VRE+F AR+ AP ++F
Sbjct: 517 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFF 576
Query: 261 DEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLR 320
DE+DSI AR G+G R + ++L ++DG + + ++ ATNR DI+D A+LR
Sbjct: 577 DELDSIAKAR-GGNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILR 635
Query: 321 PGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAG 380
PGR+D+ I P P+E+SR+ ILK + R+ + + +DL +A+ NG SGA+L +C A
Sbjct: 636 PGRLDQLIYIPLPDEKSRIAILKANLRKSPISKDVDLDFLAKMTNGFSGADLTEICQRAC 695
Query: 381 MFALRE 386
A+RE
Sbjct: 696 KLAIRE 701
Score = 523 (189.2 bits), Expect = 8.1e-50, P = 8.1e-50
Identities = 106/261 (40%), Positives = 175/261 (67%)
Query: 144 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGP 203
+P+ + E + + YD IGG+ +Q+ +IKE++ELP++HP LF+++G+ P+G+LLYGP
Sbjct: 187 EPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGP 246
Query: 204 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEI 263
PGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F A ++AP+IIF+DE+
Sbjct: 247 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEL 306
Query: 264 DSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGR 323
D+I R ++ +G+ E +R + +LL +DG + + V+ ATNR + +D AL R GR
Sbjct: 307 DAIAPKREKT---HGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGR 362
Query: 324 IDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFA 383
DR+++ P+ RL+IL+IH++ M L +DL+++A + +G GA+L A+C+EA + A
Sbjct: 363 FDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Query: 384 LRERRIHVTQEDFEMAVAKVM 404
+R++ + ED E A+VM
Sbjct: 423 IRKKMDLIDLED-ETIDAEVM 442
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 529 (191.3 bits), Expect = 9.9e-50, P = 9.9e-50
Identities = 111/263 (42%), Positives = 177/263 (67%)
Query: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
E D TY+ +GG+ +Q+ +I+E+IELP+K+PE+F S+GI+ PKGVL++G PGTGKT +A
Sbjct: 519 ENNDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIA 578
Query: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
+A+A+ ++ ++G E++ K+IGE + +R++F A E P IIF+DEIDSI + R +
Sbjct: 579 KAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSK 638
Query: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
S N + E +R + +LL +DG + +N + VL ATNR + +D AL R GR DR+IE P
Sbjct: 639 S---NNELE-KRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPV 694
Query: 333 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIH-- 390
P+E+ R +IL +++M L ++L+KIA++ +G GA+L +C EA + ++E IH
Sbjct: 695 PDEQGRYEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEH-IHFL 753
Query: 391 -VTQEDFEMAVAKVMKKETEKNM 412
+ +EDF + K+ E +KNM
Sbjct: 754 DLDEEDF-IEFMKISVDEDKKNM 775
Score = 431 (156.8 bits), Expect = 3.0e-39, P = 3.0e-39
Identities = 93/238 (39%), Positives = 142/238 (59%)
Query: 154 KVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLAR 213
++P T++ IGG+++ +++KE I P+++ L+ KG+LLYGPPG GKTLLA+
Sbjct: 927 QIPTVTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAK 986
Query: 214 AVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMES 273
A+A+ FI V G EL+ + GE VR+LF AR +P IIF DEIDS+ R S
Sbjct: 987 AIANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKER-NS 1045
Query: 274 GSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNP 333
+ N S+ R + ++L ++DG I ++ ATNR DILD+AL RPGR+D+ I P
Sbjct: 1046 NTNNDASD--RVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLP 1103
Query: 334 NEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHV 391
+ +SR I K + L +D+ +A++ G SGA++ +C A A++E IH+
Sbjct: 1104 DLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKET-IHL 1160
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 529 (191.3 bits), Expect = 9.9e-50, P = 9.9e-50
Identities = 111/263 (42%), Positives = 177/263 (67%)
Query: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
E D TY+ +GG+ +Q+ +I+E+IELP+K+PE+F S+GI+ PKGVL++G PGTGKT +A
Sbjct: 519 ENNDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIA 578
Query: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
+A+A+ ++ ++G E++ K+IGE + +R++F A E P IIF+DEIDSI + R +
Sbjct: 579 KAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSK 638
Query: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
S N + E +R + +LL +DG + +N + VL ATNR + +D AL R GR DR+IE P
Sbjct: 639 S---NNELE-KRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPV 694
Query: 333 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIH-- 390
P+E+ R +IL +++M L ++L+KIA++ +G GA+L +C EA + ++E IH
Sbjct: 695 PDEQGRYEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEH-IHFL 753
Query: 391 -VTQEDFEMAVAKVMKKETEKNM 412
+ +EDF + K+ E +KNM
Sbjct: 754 DLDEEDF-IEFMKISVDEDKKNM 775
Score = 431 (156.8 bits), Expect = 3.0e-39, P = 3.0e-39
Identities = 93/238 (39%), Positives = 142/238 (59%)
Query: 154 KVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLAR 213
++P T++ IGG+++ +++KE I P+++ L+ KG+LLYGPPG GKTLLA+
Sbjct: 927 QIPTVTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAK 986
Query: 214 AVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMES 273
A+A+ FI V G EL+ + GE VR+LF AR +P IIF DEIDS+ R S
Sbjct: 987 AIANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKER-NS 1045
Query: 274 GSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNP 333
+ N S+ R + ++L ++DG I ++ ATNR DILD+AL RPGR+D+ I P
Sbjct: 1046 NTNNDASD--RVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLP 1103
Query: 334 NEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHV 391
+ +SR I K + L +D+ +A++ G SGA++ +C A A++E IH+
Sbjct: 1104 DLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKET-IHL 1160
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 522 (188.8 bits), Expect = 1.0e-49, P = 1.0e-49
Identities = 106/261 (40%), Positives = 174/261 (66%)
Query: 144 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGP 203
+P+ + E + + YD IGG +Q+ +IKE++ELP++HP LF+++G+ P+G+LLYGP
Sbjct: 187 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGP 246
Query: 204 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEI 263
PGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F A ++AP+IIF+DE+
Sbjct: 247 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEL 306
Query: 264 DSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGR 323
D+I R ++ +G+ E +R + +LL +DG + + V+ ATNR + +D AL R GR
Sbjct: 307 DAIAPKREKT---HGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGR 362
Query: 324 IDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFA 383
DR+++ P+ RL+IL+IH++ M L +DL+++A + +G GA+L A+C+EA + A
Sbjct: 363 FDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQA 422
Query: 384 LRERRIHVTQEDFEMAVAKVM 404
+R++ + ED E A+VM
Sbjct: 423 IRKKMDLIDLED-ETIDAEVM 442
Score = 516 (186.7 bits), Expect = 4.9e-49, P = 4.9e-49
Identities = 101/246 (41%), Positives = 154/246 (62%)
Query: 141 SKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLL 200
S+ +P V +VP T++ IGGL+ +E++E+++ P++HP+ F G+ KGVL
Sbjct: 457 SQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLF 516
Query: 201 YGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM 260
YGPPG GKTLLA+A+A+ FI + G EL+ + GE VRE+F AR+ AP ++F
Sbjct: 517 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFF 576
Query: 261 DEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLR 320
DE+DSI AR G+G R + ++L ++DG + ++ ATNR DI+D A+LR
Sbjct: 577 DELDSIAKAR-GGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILR 635
Query: 321 PGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAG 380
PGR+D+ I P P+E+SR+ ILK + R+ + + +DL +A+ NG SGA+L +C A
Sbjct: 636 PGRLDQLIYIPLPDEKSRIAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRAC 695
Query: 381 MFALRE 386
A+RE
Sbjct: 696 KLAIRE 701
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 522 (188.8 bits), Expect = 1.0e-49, P = 1.0e-49
Identities = 106/261 (40%), Positives = 174/261 (66%)
Query: 144 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGP 203
+P+ + E + + YD IGG +Q+ +IKE++ELP++HP LF+++G+ P+G+LLYGP
Sbjct: 187 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGP 246
Query: 204 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEI 263
PGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F A ++AP+IIF+DE+
Sbjct: 247 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEL 306
Query: 264 DSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGR 323
D+I R ++ +G+ E +R + +LL +DG + + V+ ATNR + +D AL R GR
Sbjct: 307 DAIAPKREKT---HGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGR 362
Query: 324 IDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFA 383
DR+++ P+ RL+IL+IH++ M L +DL+++A + +G GA+L A+C+EA + A
Sbjct: 363 FDREVDIGIPDSTGRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQA 422
Query: 384 LRERRIHVTQEDFEMAVAKVM 404
+R++ + ED E A+VM
Sbjct: 423 IRKKMDLIDLED-ETIDAEVM 442
Score = 512 (185.3 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 100/246 (40%), Positives = 154/246 (62%)
Query: 141 SKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLL 200
S+ +P V +VP T++ IGGL+ +E++E+++ P++HP+ F G+ KGVL
Sbjct: 457 SQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLF 516
Query: 201 YGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM 260
YGPPG GKTLLA+A+A+ FI + G EL+ + GE VRE+F AR+ AP ++F
Sbjct: 517 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFF 576
Query: 261 DEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLR 320
DE+DSI AR G+G R + ++L ++DG + ++ ATNR DI+D A+LR
Sbjct: 577 DELDSIAKAR-GGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILR 635
Query: 321 PGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAG 380
PGR+D+ I P P+E+SR+ ILK + R+ + + +D+ +A+ NG SGA+L +C A
Sbjct: 636 PGRLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRAC 695
Query: 381 MFALRE 386
A+RE
Sbjct: 696 KLAIRE 701
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 521 (188.5 bits), Expect = 1.4e-49, P = 1.4e-49
Identities = 106/261 (40%), Positives = 174/261 (66%)
Query: 144 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGP 203
+P+ + E + + YD IGG +Q+ +IKE++ELP++HP LF+++G+ P+G+LLYGP
Sbjct: 187 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGP 246
Query: 204 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEI 263
PGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F A ++AP+IIF+DE+
Sbjct: 247 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEL 306
Query: 264 DSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGR 323
D+I R ++ +G+ E +R + +LL +DG + + V+ ATNR + +D AL R GR
Sbjct: 307 DAIAPKREKT---HGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGR 362
Query: 324 IDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFA 383
DR+++ P+ RL+IL+IH++ M L +DL+++A + +G GA+L A+C+EA + A
Sbjct: 363 FDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Query: 384 LRERRIHVTQEDFEMAVAKVM 404
+R++ + ED E A+VM
Sbjct: 423 IRKKMDLIDLED-ETIDAEVM 442
Score = 517 (187.1 bits), Expect = 3.8e-49, P = 3.8e-49
Identities = 101/246 (41%), Positives = 155/246 (63%)
Query: 141 SKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLL 200
S+ +P V +VP T++ IGGL+ +E++E+++ P++HP+ F G+ KGVL
Sbjct: 457 SQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLF 516
Query: 201 YGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM 260
YGPPG GKTLLA+A+A+ FI + G EL+ + GE VRE+F AR+ AP ++F
Sbjct: 517 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFF 576
Query: 261 DEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLR 320
DE+DSI AR G+G R + ++L ++DG + ++ ATNR DI+D A+LR
Sbjct: 577 DELDSIAKAR-GGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILR 635
Query: 321 PGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAG 380
PGR+D+ I P P+E+SR+ ILK + R+ + + +DL+ +A+ NG SGA+L +C A
Sbjct: 636 PGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRAC 695
Query: 381 MFALRE 386
A+RE
Sbjct: 696 KLAIRE 701
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 521 (188.5 bits), Expect = 1.4e-49, P = 1.4e-49
Identities = 106/261 (40%), Positives = 174/261 (66%)
Query: 144 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGP 203
+P+ + E + + YD IGG +Q+ +IKE++ELP++HP LF+++G+ P+G+LLYGP
Sbjct: 187 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGP 246
Query: 204 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEI 263
PGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F A ++AP+IIF+DE+
Sbjct: 247 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEL 306
Query: 264 DSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGR 323
D+I R ++ +G+ E +R + +LL +DG + + V+ ATNR + +D AL R GR
Sbjct: 307 DAIAPKREKT---HGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGR 362
Query: 324 IDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFA 383
DR+++ P+ RL+IL+IH++ M L +DL+++A + +G GA+L A+C+EA + A
Sbjct: 363 FDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Query: 384 LRERRIHVTQEDFEMAVAKVM 404
+R++ + ED E A+VM
Sbjct: 423 IRKKMDLIDLED-ETIDAEVM 442
Score = 517 (187.1 bits), Expect = 3.8e-49, P = 3.8e-49
Identities = 101/246 (41%), Positives = 155/246 (63%)
Query: 141 SKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLL 200
S+ +P V +VP T++ IGGL+ +E++E+++ P++HP+ F G+ KGVL
Sbjct: 457 SQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLF 516
Query: 201 YGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM 260
YGPPG GKTLLA+A+A+ FI + G EL+ + GE VRE+F AR+ AP ++F
Sbjct: 517 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFF 576
Query: 261 DEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLR 320
DE+DSI AR G+G R + ++L ++DG + ++ ATNR DI+D A+LR
Sbjct: 577 DELDSIAKAR-GGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILR 635
Query: 321 PGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAG 380
PGR+D+ I P P+E+SR+ ILK + R+ + + +DL+ +A+ NG SGA+L +C A
Sbjct: 636 PGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRAC 695
Query: 381 MFALRE 386
A+RE
Sbjct: 696 KLAIRE 701
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 521 (188.5 bits), Expect = 1.4e-49, P = 1.4e-49
Identities = 106/261 (40%), Positives = 174/261 (66%)
Query: 144 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGP 203
+P+ + E + + YD IGG +Q+ +IKE++ELP++HP LF+++G+ P+G+LLYGP
Sbjct: 187 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGP 246
Query: 204 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEI 263
PGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F A ++AP+IIF+DE+
Sbjct: 247 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEL 306
Query: 264 DSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGR 323
D+I R ++ +G+ E +R + +LL +DG + + V+ ATNR + +D AL R GR
Sbjct: 307 DAIAPKREKT---HGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGR 362
Query: 324 IDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFA 383
DR+++ P+ RL+IL+IH++ M L +DL+++A + +G GA+L A+C+EA + A
Sbjct: 363 FDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Query: 384 LRERRIHVTQEDFEMAVAKVM 404
+R++ + ED E A+VM
Sbjct: 423 IRKKMDLIDLED-ETIDAEVM 442
Score = 517 (187.1 bits), Expect = 3.8e-49, P = 3.8e-49
Identities = 101/246 (41%), Positives = 155/246 (63%)
Query: 141 SKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLL 200
S+ +P V +VP T++ IGGL+ +E++E+++ P++HP+ F G+ KGVL
Sbjct: 457 SQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLF 516
Query: 201 YGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM 260
YGPPG GKTLLA+A+A+ FI + G EL+ + GE VRE+F AR+ AP ++F
Sbjct: 517 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFF 576
Query: 261 DEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLR 320
DE+DSI AR G+G R + ++L ++DG + ++ ATNR DI+D A+LR
Sbjct: 577 DELDSIAKAR-GGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILR 635
Query: 321 PGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAG 380
PGR+D+ I P P+E+SR+ ILK + R+ + + +DL+ +A+ NG SGA+L +C A
Sbjct: 636 PGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRAC 695
Query: 381 MFALRE 386
A+RE
Sbjct: 696 KLAIRE 701
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 521 (188.5 bits), Expect = 1.4e-49, P = 1.4e-49
Identities = 106/261 (40%), Positives = 174/261 (66%)
Query: 144 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGP 203
+P+ + E + + YD IGG +Q+ +IKE++ELP++HP LF+++G+ P+G+LLYGP
Sbjct: 187 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGP 246
Query: 204 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEI 263
PGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F A ++AP+IIF+DE+
Sbjct: 247 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEL 306
Query: 264 DSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGR 323
D+I R ++ +G+ E +R + +LL +DG + + V+ ATNR + +D AL R GR
Sbjct: 307 DAIAPKREKT---HGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGR 362
Query: 324 IDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFA 383
DR+++ P+ RL+IL+IH++ M L +DL+++A + +G GA+L A+C+EA + A
Sbjct: 363 FDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Query: 384 LRERRIHVTQEDFEMAVAKVM 404
+R++ + ED E A+VM
Sbjct: 423 IRKKMDLIDLED-ETIDAEVM 442
Score = 517 (187.1 bits), Expect = 3.8e-49, P = 3.8e-49
Identities = 101/246 (41%), Positives = 155/246 (63%)
Query: 141 SKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLL 200
S+ +P V +VP T++ IGGL+ +E++E+++ P++HP+ F G+ KGVL
Sbjct: 457 SQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLF 516
Query: 201 YGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM 260
YGPPG GKTLLA+A+A+ FI + G EL+ + GE VRE+F AR+ AP ++F
Sbjct: 517 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFF 576
Query: 261 DEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLR 320
DE+DSI AR G+G R + ++L ++DG + ++ ATNR DI+D A+LR
Sbjct: 577 DELDSIAKAR-GGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILR 635
Query: 321 PGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAG 380
PGR+D+ I P P+E+SR+ ILK + R+ + + +DL+ +A+ NG SGA+L +C A
Sbjct: 636 PGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRAC 695
Query: 381 MFALRE 386
A+RE
Sbjct: 696 KLAIRE 701
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 521 (188.5 bits), Expect = 1.4e-49, P = 1.4e-49
Identities = 106/261 (40%), Positives = 174/261 (66%)
Query: 144 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGP 203
+P+ + E + + YD IGG +Q+ +IKE++ELP++HP LF+++G+ P+G+LLYGP
Sbjct: 187 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGP 246
Query: 204 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEI 263
PGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F A ++AP+IIF+DE+
Sbjct: 247 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEL 306
Query: 264 DSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGR 323
D+I R ++ +G+ E +R + +LL +DG + + V+ ATNR + +D AL R GR
Sbjct: 307 DAIAPKREKT---HGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGR 362
Query: 324 IDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFA 383
DR+++ P+ RL+IL+IH++ M L +DL+++A + +G GA+L A+C+EA + A
Sbjct: 363 FDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Query: 384 LRERRIHVTQEDFEMAVAKVM 404
+R++ + ED E A+VM
Sbjct: 423 IRKKMDLIDLED-ETIDAEVM 442
Score = 517 (187.1 bits), Expect = 3.8e-49, P = 3.8e-49
Identities = 101/246 (41%), Positives = 155/246 (63%)
Query: 141 SKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLL 200
S+ +P V +VP T++ IGGL+ +E++E+++ P++HP+ F G+ KGVL
Sbjct: 457 SQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLF 516
Query: 201 YGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM 260
YGPPG GKTLLA+A+A+ FI + G EL+ + GE VRE+F AR+ AP ++F
Sbjct: 517 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFF 576
Query: 261 DEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLR 320
DE+DSI AR G+G R + ++L ++DG + ++ ATNR DI+D A+LR
Sbjct: 577 DELDSIAKAR-GGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILR 635
Query: 321 PGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAG 380
PGR+D+ I P P+E+SR+ ILK + R+ + + +DL+ +A+ NG SGA+L +C A
Sbjct: 636 PGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRAC 695
Query: 381 MFALRE 386
A+RE
Sbjct: 696 KLAIRE 701
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 521 (188.5 bits), Expect = 1.4e-49, P = 1.4e-49
Identities = 106/261 (40%), Positives = 174/261 (66%)
Query: 144 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGP 203
+P+ + E + + YD IGG +Q+ +IKE++ELP++HP LF+++G+ P+G+LLYGP
Sbjct: 187 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGP 246
Query: 204 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEI 263
PGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F A ++AP+IIF+DE+
Sbjct: 247 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEL 306
Query: 264 DSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGR 323
D+I R ++ +G+ E +R + +LL +DG + + V+ ATNR + +D AL R GR
Sbjct: 307 DAIAPKREKT---HGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGR 362
Query: 324 IDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFA 383
DR+++ P+ RL+IL+IH++ M L +DL+++A + +G GA+L A+C+EA + A
Sbjct: 363 FDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Query: 384 LRERRIHVTQEDFEMAVAKVM 404
+R++ + ED E A+VM
Sbjct: 423 IRKKMDLIDLED-ETIDAEVM 442
Score = 514 (186.0 bits), Expect = 8.2e-49, P = 8.2e-49
Identities = 100/246 (40%), Positives = 155/246 (63%)
Query: 141 SKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLL 200
S+ +P V +VP T++ IGGL+ +E++++++ P++HP+ F G+ KGVL
Sbjct: 457 SQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLF 516
Query: 201 YGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM 260
YGPPG GKTLLA+A+A+ FI + G EL+ + GE VRE+F AR+ AP ++F
Sbjct: 517 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFF 576
Query: 261 DEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLR 320
DE+DSI AR G+G R + ++L ++DG + ++ ATNR DI+D A+LR
Sbjct: 577 DELDSIAKAR-GGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILR 635
Query: 321 PGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAG 380
PGR+D+ I P P+E+SR+ ILK + R+ + + +DL+ +A+ NG SGA+L +C A
Sbjct: 636 PGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRAC 695
Query: 381 MFALRE 386
A+RE
Sbjct: 696 KLAIRE 701
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 521 (188.5 bits), Expect = 1.4e-49, P = 1.4e-49
Identities = 106/261 (40%), Positives = 174/261 (66%)
Query: 144 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGP 203
+P+ + E + + YD IGG +Q+ +IKE++ELP++HP LF+++G+ P+G+LLYGP
Sbjct: 187 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGP 246
Query: 204 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEI 263
PGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F A ++AP+IIF+DE+
Sbjct: 247 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEL 306
Query: 264 DSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGR 323
D+I R ++ +G+ E +R + +LL +DG + + V+ ATNR + +D AL R GR
Sbjct: 307 DAIAPKREKT---HGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGR 362
Query: 324 IDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFA 383
DR+++ P+ RL+IL+IH++ M L +DL+++A + +G GA+L A+C+EA + A
Sbjct: 363 FDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQA 422
Query: 384 LRERRIHVTQEDFEMAVAKVM 404
+R++ + ED E A+VM
Sbjct: 423 IRKKMDLIDLED-ETIDAEVM 442
Score = 507 (183.5 bits), Expect = 5.0e-48, P = 5.0e-48
Identities = 101/248 (40%), Positives = 155/248 (62%)
Query: 141 SKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLL 200
S+ +P V +VP T++ IGGL+ +E++E+++ P++HP+ F G+ KGVL
Sbjct: 457 SQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLF 516
Query: 201 YGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM 260
YGPPG GKTLLA+A+A+ FI + G EL+ + GE VRE+F AR+ AP ++F
Sbjct: 517 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFF 576
Query: 261 DEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLR 320
DE+DSI AR G+G R + ++L ++DG + ++ ATNR DI+D A+LR
Sbjct: 577 DELDSIAKAR-GGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILR 635
Query: 321 PGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRG--IDLKKIAEKMNGASGAELKAVCTE 378
PGR+D+ I P P+E+SR+ ILK + R+ + + +DL+ +A+ NG SGA+L +C
Sbjct: 636 PGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKAGDVDLEFLAKMTNGFSGADLTEICQR 695
Query: 379 AGMFALRE 386
A A+RE
Sbjct: 696 ACKLAIRE 703
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 111/270 (41%), Positives = 165/270 (61%)
Query: 150 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 209
M E +T+ + G D+ +E+ E++E ++ P F+ LG PKGVL+ GPPGTGKT
Sbjct: 141 MLTEDQIKTTFADVAGCDEAKEEVAELVEY-LREPSRFQKLGGKIPKGVLMVGPPGTGKT 199
Query: 210 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 269
LLA+A+A F +SGS+ V+ ++G G+ VR++F A++ AP IIF+DEID++G
Sbjct: 200 LLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQ 259
Query: 270 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 329
R +G G G E ++T+ ++L ++DGFE + I V+ ATNR D+LD ALLRPGR DR++
Sbjct: 260 R-GAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVV 318
Query: 330 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRI 389
P+ R ILK+H RR+ L ID IA G SGA+L + EA +FA R +
Sbjct: 319 VGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKR 378
Query: 390 HVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
V+ +FE A K+M ++M + + K
Sbjct: 379 VVSMVEFEKAKDKIMMGAERRSMVMTEAQK 408
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 108/249 (43%), Positives = 159/249 (63%)
Query: 163 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 222
+ G D++ +E+ EV+E +K P F +G PKGVLL GPPGTGKTLLARAVA
Sbjct: 164 VAGADEEKQELVEVVEF-LKDPRKFAEVGARIPKGVLLVGPPGTGKTLLARAVAGEAGVP 222
Query: 223 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEV 282
F +SGS+ V+ ++G G+ VR+LF A+++AP IIF+DEID++G R +G G G E
Sbjct: 223 FFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQR-GAGLGGGHDER 281
Query: 283 QRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDIL 342
++T+ +LL ++DGF A+ I ++ ATNR DILD ALLRPGR DR+I P+ R +L
Sbjct: 282 EQTLNQLLVEMDGFGANEGIIIIAATNRPDILDPALLRPGRFDRQITVDRPDVNGREAVL 341
Query: 343 KIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAK 402
K+H+R L I+L+ IA + G SGA+L+ + EA + A R+ + + D + A +
Sbjct: 342 KVHARNKPLDENINLRAIATRTPGFSGADLENLLNEAALVAARQDKKKIDMSDIDEATDR 401
Query: 403 VMKKETEKN 411
V+ +K+
Sbjct: 402 VIAGPAKKS 410
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 104/263 (39%), Positives = 168/263 (63%)
Query: 151 KVEKVPDS--TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 208
K ++VP++ ++ + G DQ E++EV++ +K+P+ + +LG PKG LL GPPGTGK
Sbjct: 250 KFQEVPETGVSFADVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGK 308
Query: 209 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 268
TLLARAVA F + SE V+ ++G G+ VR+LF A+ AP I+F+DEID++G
Sbjct: 309 TLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGR 368
Query: 269 ARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKI 328
R +G G G+ E ++T+ +LL ++DGF ++ + VL ATNR D+LD ALLRPGR DR++
Sbjct: 369 QR-GAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQV 427
Query: 329 EFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR 388
P+ R+ IL++HSR L + +D K+A + G +GA+L+ + EA + A R
Sbjct: 428 TVDRPDVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAAILAARREL 487
Query: 389 IHVTQEDFEMAVAKVMKKETEKN 411
+++++ A+ +++ +KN
Sbjct: 488 KEISKDEISDALERIIAGPEKKN 510
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 521 (188.5 bits), Expect = 1.6e-49, P = 1.6e-49
Identities = 106/261 (40%), Positives = 174/261 (66%)
Query: 144 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGP 203
+P+ + E + + YD IGG +Q+ +IKE++ELP++HP LF+++G+ P+G+LLYGP
Sbjct: 203 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGP 262
Query: 204 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEI 263
PGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F A ++AP+IIF+DE+
Sbjct: 263 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDEL 322
Query: 264 DSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGR 323
D+I R ++ +G+ E +R + +LL +DG + + V+ ATNR + +D AL R GR
Sbjct: 323 DAIAPKREKT---HGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGR 378
Query: 324 IDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFA 383
DR+++ P+ RL+IL+IH++ M L +DL+++A + +G GA+L A+C+EA + A
Sbjct: 379 FDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQA 438
Query: 384 LRERRIHVTQEDFEMAVAKVM 404
+R++ + ED E A+VM
Sbjct: 439 IRKKMDLIDLED-ETIDAEVM 458
Score = 517 (187.1 bits), Expect = 4.4e-49, P = 4.4e-49
Identities = 101/246 (41%), Positives = 155/246 (63%)
Query: 141 SKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLL 200
S+ +P V +VP T++ IGGL+ +E++E+++ P++HP+ F G+ KGVL
Sbjct: 473 SQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLF 532
Query: 201 YGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM 260
YGPPG GKTLLA+A+A+ FI + G EL+ + GE VRE+F AR+ AP ++F
Sbjct: 533 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFF 592
Query: 261 DEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLR 320
DE+DSI AR G+G R + ++L ++DG + ++ ATNR DI+D A+LR
Sbjct: 593 DELDSIAKAR-GGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILR 651
Query: 321 PGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAG 380
PGR+D+ I P P+E+SR+ ILK + R+ + + +DL+ +A+ NG SGA+L +C A
Sbjct: 652 PGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRAC 711
Query: 381 MFALRE 386
A+RE
Sbjct: 712 KLAIRE 717
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 101/246 (41%), Positives = 154/246 (62%)
Query: 141 SKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLL 200
S+ +P V +VP T++ IGGL+ +E++E+++ P++HP+ F G+ KGVL
Sbjct: 189 SQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLF 248
Query: 201 YGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM 260
YGPPG GKTLLA+A+A+ FI + G EL+ + GE VRE+F AR+ AP ++F
Sbjct: 249 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFF 308
Query: 261 DEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLR 320
DE+DSI AR G+G R + ++L ++DG + ++ ATNR DI+D A+LR
Sbjct: 309 DELDSIAKAR-GGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILR 367
Query: 321 PGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAG 380
PGR+D+ I P P+E+SR+ ILK + R+ + + +DL +A+ NG SGA+L +C A
Sbjct: 368 PGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRAC 427
Query: 381 MFALRE 386
A+RE
Sbjct: 428 KLAIRE 433
Score = 294 (108.6 bits), Expect = 1.7e-24, P = 1.7e-24
Identities = 66/178 (37%), Positives = 112/178 (62%)
Query: 227 SGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTM 286
SG E++ K GE +R+ F A ++AP+IIF+DE+D+I R ++ +G+ E +R +
Sbjct: 2 SGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT---HGEVE-RRIV 57
Query: 287 LELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHS 346
+LL +DG + + V+ ATNR + +D AL R GR DR+++ P+ RL+IL+IH+
Sbjct: 58 SQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHT 117
Query: 347 RRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVM 404
+ M L +DL+++ + +G GA+L A+C+EA + A+R++ + ED E A+VM
Sbjct: 118 KNMKLADDVDLEQVGNETHGHVGADLAALCSEAALQAIRKKMDLIDLED-ETIDAEVM 174
>TIGR_CMR|SO_1197 [details] [associations]
symbol:SO_1197 "ATP-dependent metalloprotease FtsH"
species:211586 "Shewanella oneidensis MR-1" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051301 "cell division" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006200
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
OMA:RSIIDQC RefSeq:NP_716822.2 ProteinModelPortal:Q8EHM2 SMR:Q8EHM2
GeneID:1169025 KEGG:son:SO_1197 PATRIC:23522048
ProtClustDB:CLSK906146 Uniprot:Q8EHM2
Length = 652
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 109/271 (40%), Positives = 168/271 (61%)
Query: 149 LMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 208
LM +++ +T+ + G D+ +E+KE+++ ++ P F+ LG P GVL+ GPPGTGK
Sbjct: 146 LMSEDQIK-TTFADVAGCDEAKEEVKELVDY-LRDPTKFQKLGGRIPTGVLMVGPPGTGK 203
Query: 209 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 268
TLLA+A+A + F +SGS+ V+ ++G G+ VR++F A++ AP IIF+DEID++G
Sbjct: 204 TLLAKAIAGESKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKSAPCIIFIDEIDAVGR 263
Query: 269 ARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKI 328
R +G G G E ++T+ ++L ++DGFE + I V+ ATNR D+LD ALLRPGR DR++
Sbjct: 264 QR-GAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDSALLRPGRFDRQV 322
Query: 329 EFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR 388
P+ R ILK+H R++ L + IA G SGA+L + EA +FA R R
Sbjct: 323 VVGLPDVRGREQILKVHMRKVPLSEDVKASVIARGTPGFSGADLANLVNEAALFAARGNR 382
Query: 389 IHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
V E+FE A K+M ++M + + K
Sbjct: 383 RVVGMEEFERAKDKIMMGAERRSMVMSEAEK 413
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 519 (187.8 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 103/253 (40%), Positives = 171/253 (67%)
Query: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
+++ + YD IGG+ +Q+ +I+E++ELP++HP+LF+++G+ PKG+LLYGPPG GKT++A
Sbjct: 194 DRLDEVGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIA 253
Query: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
RAVA+ T F ++G E++ K GE +R+ F A ++APSIIF+DEIDSI R +
Sbjct: 254 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREK 313
Query: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
+ G+ E +R + +LL +DG ++ + V+ ATNR + +D AL R GR DR+I+
Sbjct: 314 T---QGEVE-RRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDITI 369
Query: 333 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVT 392
P+ RL+I++IH++ M L +DL+ +A + +G GA+L A+CTE+ + +RE+ +
Sbjct: 370 PDATGRLEIMRIHTKNMKLDETVDLEAVANETHGYVGADLAALCTESALQCIREKMDVID 429
Query: 393 QEDFEMAVAKVMK 405
ED E A++++
Sbjct: 430 LED-ETISAEILE 441
Score = 500 (181.1 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 102/258 (39%), Positives = 156/258 (60%)
Query: 152 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLL 211
V +VP +T++ IGGL+ +E++E ++ P++HPE F G+ KGVL YGPPG GKTLL
Sbjct: 466 VVEVPTTTWEDIGGLEGVKRELRETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLL 525
Query: 212 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARM 271
A+A+A+ FI + G EL+ + GE VRELF AR+ AP ++F DE+DSI +R
Sbjct: 526 AKAIANECQANFISIKGPELLTMWFGESEANVRELFDKARQAAPCVLFFDELDSIARSR- 584
Query: 272 ESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFP 331
S G+ R + ++L ++DG A + ++ ATNR DI+D A+LRPGR+D+ I P
Sbjct: 585 GSSQGDAGGAGDRVINQILTEMDGMNAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIP 644
Query: 332 NPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHV 391
P+ SR+ ILK + + + +DL+ + +K G SGA+L +C A A+RE
Sbjct: 645 LPDLPSRVAILKACLNKSPVAKDVDLEFLGQKTQGFSGADLTEICQRACKLAIRES---- 700
Query: 392 TQEDFEMAVAKVMKKETE 409
++D E A+ +T+
Sbjct: 701 IEKDIESTKARQESGDTK 718
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 520 (188.1 bits), Expect = 2.3e-49, P = 2.3e-49
Identities = 102/243 (41%), Positives = 167/243 (68%)
Query: 160 YDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 219
YD IGG +Q+ +I+E++ELP++HP+LF+++GI P+GVL+YGPPGTGKTL+ARAVA+ T
Sbjct: 213 YDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANET 272
Query: 220 DCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGD 279
F ++G E++ K GE +R+ F A ++AP+IIF+DEIDSI R ++ NG+
Sbjct: 273 GAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDKT---NGE 329
Query: 280 SEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRL 339
E +R + +LL +DG +A + + V+ ATNR + +D AL R GR DR+++ P+ RL
Sbjct: 330 VE-RRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRL 388
Query: 340 DILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR--IHVTQEDFE 397
++L+IH++ M L +DL+ +A + +G GA++ ++C+EA M +RE+ I + +++ +
Sbjct: 389 EVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDEDEID 448
Query: 398 MAV 400
V
Sbjct: 449 AEV 451
Score = 503 (182.1 bits), Expect = 1.7e-47, P = 1.7e-47
Identities = 127/358 (35%), Positives = 193/358 (53%)
Query: 56 RLEAQRNELNSRVRMLKEELQL---LQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXX 112
RLE R ++++ L +++ L E YVG + + + ++ E ++
Sbjct: 387 RLEVLR--IHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIR-EKMDLIDLD 443
Query: 113 XXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKE 172
S V + N + L PS + V VE V + T+D +GGLD+ +E
Sbjct: 444 EDEIDAEVLDSLGVTMDNFRFALGNSNPSALRETV----VESV-NVTWDDVGGLDEIKEE 498
Query: 173 IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV 232
+KE +E P+ HP+ + G++ KGVL YGPPGTGKTLLA+AVA FI V G EL+
Sbjct: 499 LKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELL 558
Query: 233 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMES-GSGNGDSEVQRTMLELLN 291
+ GE +R++F AR AP+++F+DE+DSI AR S G G S+ R + +LL
Sbjct: 559 SMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSLGDAGGASD--RVVNQLLT 616
Query: 292 QLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNL 351
++DG A + V+ ATNR D +D A+LRPGR+D+ I P P+E +RL IL R+ L
Sbjct: 617 EMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPL 676
Query: 352 MRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 409
G++L IA+ G SGA+L + A +A+++ Q + E V KV ++ E
Sbjct: 677 EPGLELTAIAKATQGFSGADLLYIVQRAAKYAIKDSIEAHRQHEAEKEV-KVEGEDVE 733
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 519 (187.8 bits), Expect = 2.3e-49, P = 2.3e-49
Identities = 103/252 (40%), Positives = 169/252 (67%)
Query: 144 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGP 203
DP+ + E + D YD +GG+ +Q+ +IKE++ELP++HP+LF+++GI P+G+LL+GP
Sbjct: 193 DPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGP 252
Query: 204 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEI 263
PGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F ++ P+I+F+DEI
Sbjct: 253 PGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEI 312
Query: 264 DSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGR 323
D+I R ++ NG+ E +R + +LL +DG + + + V+ ATNR + +D AL R GR
Sbjct: 313 DAIAPKREKT---NGEVE-RRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGR 368
Query: 324 IDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFA 383
DR+I+ P+ RL+IL+IH++ M L +DL++IA + +G GA+L ++C+EA +
Sbjct: 369 FDREIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQ 428
Query: 384 LRERRIHVTQED 395
+RE+ + ED
Sbjct: 429 IREKMELIDLED 440
Score = 496 (179.7 bits), Expect = 8.3e-47, P = 8.3e-47
Identities = 99/246 (40%), Positives = 150/246 (60%)
Query: 152 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLL 211
V + P++T+ IGGL +E++E+++ P++HPE + G+ +GVL YGPPG GKTLL
Sbjct: 474 VVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLL 533
Query: 212 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARM 271
A+A+A+ FI + G EL+ + GE VR++F AR AP ++F DE+DSI AR
Sbjct: 534 AKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARG 593
Query: 272 ESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFP 331
G+G R + ++L ++DG A + ++ ATNR DI+D A+LRPGR+D+ I P
Sbjct: 594 GGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIP 653
Query: 332 NPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE---RR 388
P+E SR ILK R+ L + +DL +A+ G SGA+L +C A A+RE +
Sbjct: 654 LPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKE 713
Query: 389 IHVTQE 394
I + +E
Sbjct: 714 IRIEKE 719
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 519 (187.8 bits), Expect = 2.3e-49, P = 2.3e-49
Identities = 103/252 (40%), Positives = 169/252 (67%)
Query: 144 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGP 203
DP+ + E + D YD +GG+ +Q+ +IKE++ELP++HP+LF+++GI P+G+LL+GP
Sbjct: 193 DPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGP 252
Query: 204 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEI 263
PGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F ++ P+I+F+DEI
Sbjct: 253 PGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEI 312
Query: 264 DSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGR 323
D+I R ++ NG+ E +R + +LL +DG + + + V+ ATNR + +D AL R GR
Sbjct: 313 DAIAPKREKT---NGEVE-RRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGR 368
Query: 324 IDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFA 383
DR+I+ P+ RL+IL+IH++ M L +DL++IA + +G GA+L ++C+EA +
Sbjct: 369 FDREIDIGIPDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQ 428
Query: 384 LRERRIHVTQED 395
+RE+ + ED
Sbjct: 429 IREKMELIDLED 440
Score = 496 (179.7 bits), Expect = 8.3e-47, P = 8.3e-47
Identities = 99/246 (40%), Positives = 150/246 (60%)
Query: 152 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLL 211
V + P++T+ IGGL +E++E+++ P++HPE + G+ +GVL YGPPG GKTLL
Sbjct: 474 VVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLL 533
Query: 212 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARM 271
A+A+A+ FI + G EL+ + GE VR++F AR AP ++F DE+DSI AR
Sbjct: 534 AKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARG 593
Query: 272 ESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFP 331
G+G R + ++L ++DG A + ++ ATNR DI+D A+LRPGR+D+ I P
Sbjct: 594 GGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIP 653
Query: 332 NPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE---RR 388
P+E SR ILK R+ L + +DL +A+ G SGA+L +C A A+RE +
Sbjct: 654 LPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKE 713
Query: 389 IHVTQE 394
I + +E
Sbjct: 714 IRIEKE 719
>SGD|S000004695 [details] [associations]
symbol:YTA12 "Component of the mitochondrial inner membrane
m-AAA protease" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS;IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0006508 "proteolysis" evidence=IEA;IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IDA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA;IMP] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006461 "protein complex assembly" evidence=IMP]
[GO:0006465 "signal peptide processing" evidence=IMP] [GO:0005745
"m-AAA complex" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 SGD:S000004695 EMBL:U09358 GO:GO:0005524
GO:GO:0006461 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0008237 GO:GO:0004222 GO:GO:0016887 EMBL:BK006946
GO:GO:0030163 EMBL:Z49259 eggNOG:COG0465
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0097002 GO:GO:0045041
GO:GO:0006465 EMBL:X81068 EMBL:AY693099 PIR:S54465
RefSeq:NP_013807.1 ProteinModelPortal:P40341 SMR:P40341
DIP:DIP-889N IntAct:P40341 MINT:MINT-596896 STRING:P40341
MEROPS:M41.003 PaxDb:P40341 PeptideAtlas:P40341
EnsemblFungi:YMR089C GeneID:855114 KEGG:sce:YMR089C CYGD:YMR089c
OMA:NFSGAND NextBio:978455 Genevestigator:P40341 GermOnline:YMR089C
Uniprot:P40341
Length = 825
Score = 491 (177.9 bits), Expect = 2.5e-49, Sum P(2) = 2.5e-49
Identities = 105/244 (43%), Positives = 146/244 (59%)
Query: 163 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 222
+ G D+ +EI E + +K P +E +G P+G +L GPPGTGKTLLA+A A
Sbjct: 350 VAGCDEAKEEIMEFVSF-LKEPSRYEKMGAKIPRGAILSGPPGTGKTLLAKATAGEAGVP 408
Query: 223 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEV 282
F VSGSE V+ ++G G+ VR+LF ARE+APSI+F+DEID+IG AR + + E
Sbjct: 409 FYFVSGSEFVEMFVGVGAARVRDLFKTARENAPSIVFIDEIDAIGKARQKGNFSGANDER 468
Query: 283 QRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDIL 342
+ T+ ++L ++DGF ++ + VL TNR DILD+ALLRPGR DR I P E R I
Sbjct: 469 ENTLNQMLVEMDGFTPADHVVVLAGTNRPDILDKALLRPGRFDRHINIDKPELEGRKAIF 528
Query: 343 KIHSRRMNLMRGI-DLK-KIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAV 400
+H + L I DLK ++A G SGA++ VC EA + A R V FE A+
Sbjct: 529 AVHLHHLKLAGEIFDLKNRLAALTPGFSGADIANVCNEAALIAARSDEDAVKLNHFEQAI 588
Query: 401 AKVM 404
+V+
Sbjct: 589 ERVI 592
Score = 53 (23.7 bits), Expect = 2.5e-49, Sum P(2) = 2.5e-49
Identities = 18/65 (27%), Positives = 27/65 (41%)
Query: 33 RQYY-LQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKV 91
R YY L HI L Q R +NE N+ L +E+ +E + +V K
Sbjct: 21 RSYYGLTHIKSLHTQYRLLNRLQENKSGNKNEDNNEDAKLNKEIPTDEEVEAIRKQVEKY 80
Query: 92 MGKNK 96
+ + K
Sbjct: 81 IEQTK 85
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 107/254 (42%), Positives = 160/254 (62%)
Query: 163 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 222
+ G D++ +E+ EV+E +K P F LG PKGVLL GPPGTGKTLLA+A A
Sbjct: 163 VAGADEEKQELVEVVEF-LKDPRKFAELGARIPKGVLLVGPPGTGKTLLAKACAGEAGVP 221
Query: 223 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEV 282
F +SGS+ V+ ++G G+ VR+LF A+++AP +IF+DEID++G R +G G G E
Sbjct: 222 FFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVGRQR-GAGLGGGHDER 280
Query: 283 QRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDIL 342
++T+ +LL ++DGF A+ I ++ ATNR DILD ALLRPGR DR+I P+ R +L
Sbjct: 281 EQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQITVDRPDVIGREAVL 340
Query: 343 KIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAK 402
K+H+R L ++LK IA + G SGA+L+ + EA + A R+ + + D + A +
Sbjct: 341 KVHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAALVAARQNKKKIDARDIDEATDR 400
Query: 403 VMKKETEKNMSLRK 416
V+ +K+ + K
Sbjct: 401 VIAGPAKKSRVISK 414
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 518 (187.4 bits), Expect = 3.6e-49, P = 3.6e-49
Identities = 103/243 (42%), Positives = 162/243 (66%)
Query: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
EK+ + YD IGG +Q+ +I+E+IELP++HP LF++LG+ P+GVLLYGPPG+GKT +A
Sbjct: 199 EKLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIA 258
Query: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
RAVA+ T F ++G E++ K GE +R F A +++P+IIF+DEIDSI R +
Sbjct: 259 RAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREK 318
Query: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
+ NG+ E +R + +LL +DG ++ ++ V+ ATNR + +D AL R GR DR+I+
Sbjct: 319 T---NGEVE-RRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGV 374
Query: 333 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVT 392
P++ R +IL+IH++ M L + L+++A +G GA+L +CTEA + +RE+ +
Sbjct: 375 PDDNGRFEILRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVID 434
Query: 393 QED 395
ED
Sbjct: 435 LED 437
Score = 483 (175.1 bits), Expect = 2.5e-45, P = 2.5e-45
Identities = 105/261 (40%), Positives = 156/261 (59%)
Query: 152 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLL 211
V +VP+ +D IGGLD+ ++E+I PI HP+ FE G++ +GVL YGPPG GKTLL
Sbjct: 471 VVEVPNVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLL 530
Query: 212 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARM 271
A+AVA F+ + G EL+ + GE VRE+F AR AP ++F DE+DSIG+ R
Sbjct: 531 AKAVASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRG 590
Query: 272 ES-GSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEF 330
S G G+G + R M +LL ++DG + + ATNR ++LD+ALLRPGR+D+ I
Sbjct: 591 SSLGDGSGAGD--RVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYI 648
Query: 331 PNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIH 390
P P+ +R+ IL R+ + + + +A+K G SGA+L +C A A+R+ I
Sbjct: 649 PLPDLGARISILTAILRKCPVAENVPIDFLAQKTAGFSGADLAELCQRAARAAIRDA-ID 707
Query: 391 VTQEDFEMAVAKVMKKETEKN 411
+ + + + KKE E+N
Sbjct: 708 AEEMNKKSKLELSNKKENEQN 728
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 518 (187.4 bits), Expect = 3.6e-49, P = 3.6e-49
Identities = 103/243 (42%), Positives = 162/243 (66%)
Query: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
EK+ + YD IGG +Q+ +I+E+IELP++HP LF++LG+ P+GVLLYGPPG+GKT +A
Sbjct: 199 EKLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIA 258
Query: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
RAVA+ T F ++G E++ K GE +R F A +++P+IIF+DEIDSI R +
Sbjct: 259 RAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREK 318
Query: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
+ NG+ E +R + +LL +DG ++ ++ V+ ATNR + +D AL R GR DR+I+
Sbjct: 319 T---NGEVE-RRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGV 374
Query: 333 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVT 392
P++ R +IL+IH++ M L + L+++A +G GA+L +CTEA + +RE+ +
Sbjct: 375 PDDNGRFEILRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVID 434
Query: 393 QED 395
ED
Sbjct: 435 LED 437
Score = 483 (175.1 bits), Expect = 2.5e-45, P = 2.5e-45
Identities = 105/261 (40%), Positives = 156/261 (59%)
Query: 152 VEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLL 211
V +VP+ +D IGGLD+ ++E+I PI HP+ FE G++ +GVL YGPPG GKTLL
Sbjct: 471 VVEVPNVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLL 530
Query: 212 ARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARM 271
A+AVA F+ + G EL+ + GE VRE+F AR AP ++F DE+DSIG+ R
Sbjct: 531 AKAVASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRG 590
Query: 272 ES-GSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEF 330
S G G+G + R M +LL ++DG + + ATNR ++LD+ALLRPGR+D+ I
Sbjct: 591 SSLGDGSGAGD--RVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYI 648
Query: 331 PNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIH 390
P P+ +R+ IL R+ + + + +A+K G SGA+L +C A A+R+ I
Sbjct: 649 PLPDLGARISILTAILRKCPVAENVPIDFLAQKTAGFSGADLAELCQRAARAAIRDA-ID 707
Query: 391 VTQEDFEMAVAKVMKKETEKN 411
+ + + + KKE E+N
Sbjct: 708 AEEMNKKSKLELSNKKENEQN 728
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 517 (187.1 bits), Expect = 3.6e-49, P = 3.6e-49
Identities = 103/252 (40%), Positives = 169/252 (67%)
Query: 144 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGP 203
DP+ + E + YD IGG +Q+ +IKE++ELP++HP LF+++G+ P+G+L+YGP
Sbjct: 184 DPIKREEEEESLNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGP 243
Query: 204 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEI 263
PGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F A +++P+IIF+DEI
Sbjct: 244 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEI 303
Query: 264 DSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGR 323
D+I R ++ +G+ E +R + +LL +DG + S+ + V+ ATNR + +D AL R GR
Sbjct: 304 DAIAPKRDKT---HGEVE-RRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGR 359
Query: 324 IDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFA 383
DR+I+ P+ RL++L+IH++ M L +DL++IA + +G GA+L ++C+EA +
Sbjct: 360 FDREIDIGIPDATGRLEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQ 419
Query: 384 LRERRIHVTQED 395
+RE+ + ED
Sbjct: 420 IREKMDLIDLED 431
Score = 500 (181.1 bits), Expect = 2.8e-47, P = 2.8e-47
Identities = 118/334 (35%), Positives = 184/334 (55%)
Query: 56 RLEAQRNELNSRVRMLKEELQLLQ---EPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXX 112
RLE R ++++ L +++ L Q E +VG + + L ++ E ++
Sbjct: 374 RLEVLR--IHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIR-EKMDLIDLE 430
Query: 113 XXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKE 172
S V + N Y + PS + V VE VP++T+ IGGL+ KE
Sbjct: 431 DDKIDAEVLASLAVTMENFRYAMTKSSPSALRETV----VE-VPNTTWTDIGGLESVKKE 485
Query: 173 IKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV 232
++E+++ P++HP+ F G+ +GVL YGPPG GKTLLA+A+A+ FI V G EL+
Sbjct: 486 LQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELL 545
Query: 233 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQ 292
+ GE VR++F AR AP ++F DE+DSI AR G+ R + ++L +
Sbjct: 546 TMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKAR-GGNVGDAGGAADRVINQILTE 604
Query: 293 LDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLM 352
+DG A + ++ ATNR DI+D A+LRPGR+D+ I P P+++SR ILK + R+ L
Sbjct: 605 MDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREAILKANLRKSPLA 664
Query: 353 RGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
+ +DL IA+ G SGA+L +C A A+R+
Sbjct: 665 KEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQ 698
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 517 (187.1 bits), Expect = 4.0e-49, P = 4.0e-49
Identities = 106/262 (40%), Positives = 172/262 (65%)
Query: 144 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGP 203
+P+ + E + + YD IGG +Q+ +IKE++ELP++HP LF+++G+ P+G+LLYGP
Sbjct: 187 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGP 246
Query: 204 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEI 263
PGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F ++AP+IIF+DE+
Sbjct: 247 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDEL 306
Query: 264 DSIGSAR-MESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPG 322
D+I S S +G+ E +R + +LL +DG + + V+ ATNR + +D AL R G
Sbjct: 307 DAIASDDCFPSPQTHGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 365
Query: 323 RIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMF 382
R DR+++ P+ RL+IL+IH++ M L +DL+++A + +G GA+L A+C+EA +
Sbjct: 366 RFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQ 425
Query: 383 ALRERRIHVTQEDFEMAVAKVM 404
A+R++ + ED E A+VM
Sbjct: 426 AIRKKMDLIDLED-ETIDAEVM 446
Score = 515 (186.3 bits), Expect = 6.6e-49, P = 6.6e-49
Identities = 101/246 (41%), Positives = 154/246 (62%)
Query: 141 SKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLL 200
S+ +P V +VP T++ IGGL+ +E++E+++ P++HP+ F G+ KGVL
Sbjct: 461 SQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLF 520
Query: 201 YGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM 260
YGPPG GKTLLA+A+A+ FI + G EL+ + GE VRE+F AR+ AP ++F
Sbjct: 521 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFF 580
Query: 261 DEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLR 320
DE+DSI AR G+G R + ++L ++DG + ++ ATNR DI+D A+LR
Sbjct: 581 DELDSIAKAR-GGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILR 639
Query: 321 PGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAG 380
PGR+D+ I P P+E+SR+ ILK + R+ + + +DL +A+ NG SGA+L +C A
Sbjct: 640 PGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRAC 699
Query: 381 MFALRE 386
A+RE
Sbjct: 700 KLAIRE 705
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 519 (187.8 bits), Expect = 4.2e-49, P = 4.2e-49
Identities = 132/384 (34%), Positives = 214/384 (55%)
Query: 42 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGS---YVGEVVKVMGKNKVL 98
E+++ V L+ L+ +L RV L E++LLQ S YVG +K + L
Sbjct: 518 EIEIGVPNAADRLDILQ----KLLQRVPHLLTEVELLQLANSAHGYVGADLKALCNEAGL 573
Query: 99 VKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDS 158
+ + V+ ++ L + ++ I PS + + ++ VP+
Sbjct: 574 YAL----RRVLNKQPNLSDSKMAGLVKITLNDFLQGMNDIRPSAMREVA----ID-VPNV 624
Query: 159 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 218
++ IGGL+ ++K+ +E P+KHPE F +GI PKGVLLYGPPG KT++A+A+A+
Sbjct: 625 SWSDIGGLENIKLKLKQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANE 684
Query: 219 TDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNG 278
+ F+ + G EL+ KY+GE R VRE+F AR +PSIIF DE+D++ +E GS +G
Sbjct: 685 SGLNFLAIKGPELMNKYVGESERAVREIFRKARAVSPSIIFFDELDALA---IERGSSSG 741
Query: 279 DSEV-QRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEES 337
V R + +LL ++DG E + +L ATNR D +D+AL+RPGRIDR I P P+ +
Sbjct: 742 AGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAAT 801
Query: 338 RLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE--RRIHVTQED 395
R +IL + M + ++L ++ + + SGAE+ AVC EA + AL E + +T+
Sbjct: 802 RREILNLQFHSMPISNDVNLDELIFQTDTYSGAEIIAVCREAALLALEEDIQANSITRRH 861
Query: 396 FEMAVAKVMKKETEKNMSLRKLWK 419
F A++ V + ++ SLR+ ++
Sbjct: 862 FTRALSTVTPRISK---SLRRFYE 882
Score = 514 (186.0 bits), Expect = 1.5e-48, P = 1.5e-48
Identities = 106/228 (46%), Positives = 150/228 (65%)
Query: 159 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 218
TYDMIGGL Q+K I+E+IELP+K PELF+S GI P+GVLLYGPPGTGKT++ARAVA+
Sbjct: 351 TYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVANE 410
Query: 219 TDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNG 278
++G E++ K+ GE +R++F A PSIIF+DE+D++ R E
Sbjct: 411 VGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR-EGAQNEV 469
Query: 279 DSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR 338
+ V ++L L++ + + ++ VL ATNR LD AL RPGR D++IE PN R
Sbjct: 470 EKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAADR 529
Query: 339 LDIL-KIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALR 385
LDIL K+ R +L+ ++L ++A +G GA+LKA+C EAG++ALR
Sbjct: 530 LDILQKLLQRVPHLLTEVELLQLANSAHGYVGADLKALCNEAGLYALR 577
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 519 (187.8 bits), Expect = 4.2e-49, P = 4.2e-49
Identities = 111/268 (41%), Positives = 167/268 (62%)
Query: 155 VPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 214
VP+ ++ IGGL+ ++K+ +E P+KHP+ F +GI PKGVLLYGPPG KT++A+A
Sbjct: 621 VPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKA 680
Query: 215 VAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESG 274
+A+ + F+ + G EL+ KY+GE R VRE+F AR APSIIF DE+D++ +E G
Sbjct: 681 LANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELDALA---VERG 737
Query: 275 SGNGDSEV-QRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNP 333
S +G V R + +LL ++DG E + VL ATNR D +D+AL+RPGRIDR I P P
Sbjct: 738 SSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRIDKALMRPGRIDRIIYVPLP 797
Query: 334 NEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE--RRIHV 391
+ +R +IL + M + +DL ++ + + SGAE+ AVC EA + AL E + +
Sbjct: 798 DAATRREILNLQFHSMPISNEVDLDELVLQTDTYSGAEIIAVCKEAALLALEENIKADCI 857
Query: 392 TQEDFEMAVAKVMKKETEKNMSLRKLWK 419
+ F A++ V + E SLR+ ++
Sbjct: 858 MKRHFTQALSIVTPRIPE---SLRRFYE 882
Score = 514 (186.0 bits), Expect = 1.5e-48, P = 1.5e-48
Identities = 111/247 (44%), Positives = 159/247 (64%)
Query: 147 VNLMKV---EKVPDS----TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVL 199
+NL K+ K DS TYDMIGGL+ Q+K I+E+IELP+K PELF+S GI P+G+L
Sbjct: 332 INLRKICTNSKEQDSQFKVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLL 391
Query: 200 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIF 259
LYGPPGTGKT++ARAVA+ ++G E++ K+ GE +R++F A PSIIF
Sbjct: 392 LYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIF 451
Query: 260 MDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALL 319
+DE+D++ R E + V ++L L++ + + ++ VL ATNR LD AL
Sbjct: 452 IDELDALCPKR-EGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALR 510
Query: 320 RPGRIDRKIEFPNPNEESRLDILKIHSRRM-NLMRGIDLKKIAEKMNGASGAELKAVCTE 378
RPGR D++IE PN + RLDIL+ RR+ +L+ +L ++A +G GA+LKA+C E
Sbjct: 511 RPGRFDKEIEIGIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNE 570
Query: 379 AGMFALR 385
AG+ ALR
Sbjct: 571 AGLHALR 577
>CGD|CAL0004443 [details] [associations]
symbol:orf19.2057 species:5476 "Candida albicans" [GO:0005745
"m-AAA complex" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 CGD:CAL0004443 GO:GO:0016021
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 EMBL:AACQ01000031 EMBL:AACQ01000030
MEROPS:M41.003 RefSeq:XP_719505.1 RefSeq:XP_719629.1
ProteinModelPortal:Q5AD10 SMR:Q5AD10 GeneID:3638753 GeneID:3638884
KEGG:cal:CaO19.2057 KEGG:cal:CaO19.9604 Uniprot:Q5AD10
Length = 846
Score = 504 (182.5 bits), Expect = 5.3e-49, Sum P(2) = 5.3e-49
Identities = 105/255 (41%), Positives = 159/255 (62%)
Query: 163 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 222
+ G+ + +E+ E ++ +++PE +E LG P+G +L GPPGTGKTLLA+A A
Sbjct: 375 VAGMAEAKQEVMEFVKF-LQNPEKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEAGVP 433
Query: 223 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEV 282
F VSGSE V+ ++G G+ VR+LF ARE+APSI+F+DEID+IG R + + + E
Sbjct: 434 FYSVSGSEFVEMFVGVGASRVRDLFKTARENAPSIVFVDEIDAIGKQRSKGNATGANDER 493
Query: 283 QRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDIL 342
+ T+ +LL ++DGF+ S+ + VL TNR DILD+AL+RPGR DR + NP R +I
Sbjct: 494 ETTLNQLLVEMDGFDTSDHVVVLAGTNRPDILDRALMRPGRFDRHVHIDNPELLGRKEIF 553
Query: 343 KIHSRRMNLMRGID--LK-KIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMA 399
+H +++ L + ID L ++A G SGA++ VC EA + A R VT FE+A
Sbjct: 554 DVHLQKITLQKDIDPDLSGRLAALTPGFSGADIANVCNEAALIAARYNAEFVTLRHFELA 613
Query: 400 VAKVMKKETEKNMSL 414
+ +V+ +K+ L
Sbjct: 614 IERVIGGVEKKSKLL 628
Score = 37 (18.1 bits), Expect = 5.3e-49, Sum P(2) = 5.3e-49
Identities = 7/27 (25%), Positives = 16/27 (59%)
Query: 162 MIGGLDQQIKEIKEVIELPIKHPELFE 188
M+ D++ KE +E+ + +P+L +
Sbjct: 1 MLKEFDEKCKEFEEIKGVNTLYPDLVD 27
>FB|FBgn0032450 [details] [associations]
symbol:CG5776 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014134 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 KO:K14575 GeneTree:ENSGT00700000104502 OMA:MLLRCVA
EMBL:AY051725 RefSeq:NP_609585.1 UniGene:Dm.8715 SMR:Q9VK63
EnsemblMetazoa:FBtr0080407 EnsemblMetazoa:FBtr0329925 GeneID:34680
KEGG:dme:Dmel_CG5776 UCSC:CG5776-RA FlyBase:FBgn0032450
InParanoid:Q9VK63 OrthoDB:EOG4547DV GenomeRNAi:34680 NextBio:789659
Uniprot:Q9VK63
Length = 799
Score = 515 (186.3 bits), Expect = 5.9e-49, P = 5.9e-49
Identities = 107/262 (40%), Positives = 163/262 (62%)
Query: 156 PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAV 215
P+ + IGG + +++ IE P+ H + F+ LGI P+G+L++GPPG KT++A+A+
Sbjct: 530 PNVQWSDIGGQSELRLAMQQAIEWPLLHADKFQRLGIKPPRGILMFGPPGCSKTMIAKAL 589
Query: 216 AHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMES-G 274
A + F+ + G EL ++GE R VRE+F AR+ AP+I+F DEID+IG R E G
Sbjct: 590 ATESKLNFLSIKGPELFSMWVGESERAVREVFRKARQVAPAIVFFDEIDAIGGERSEGDG 649
Query: 275 SGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPN 334
S +G S +R + +LL +LDG EA + ++ ATNR D++D+ALLRPGRIDR + P
Sbjct: 650 SSSGSSVKERVLTQLLTELDGVEALQNVTIVAATNRPDMIDKALLRPGRIDRILYVGLPQ 709
Query: 335 EESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE--RRIHVT 392
E+R +ILKI R M + +D++K+ + G SGAE++AVC EA + AL + V
Sbjct: 710 CEARREILKIKLRAMPISNDVDMEKLVQLTEGYSGAEIQAVCHEAALRALEQSFEAEDVK 769
Query: 393 QEDFEMAVAKVMKKETEKNMSL 414
DFE A+ V + + + + L
Sbjct: 770 WTDFEHALKAVPPRTSPELLKL 791
Score = 207 (77.9 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 60/224 (26%), Positives = 121/224 (54%)
Query: 163 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA---VAHHT 219
IGGLD+Q++ ++E +E + L G+ +G+LLYG G GK+++ A VA
Sbjct: 274 IGGLDRQLQLVEESMEYALGFRTL--PAGLRVSRGLLLYGATGCGKSMVLEAMCAVAEER 331
Query: 220 D---CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAP--SIIFMDEIDSIGSARMESG 274
IR++ E+ K++GE + + +F A H P +++ ++++ ++ + E
Sbjct: 332 SQGHVQLIRINSGEVYSKFLGETEQKLGAIFERAYNHYPHPTLLLIEDVHNL-CPKQE-- 388
Query: 275 SGNGDSEVQRTMLELLNQLDGFEASNKIK-----VLMATNRIDILDQALLRPGRIDRKIE 329
N D V+R L L+ LD + +++K VL +++ID L ++ R GR+D ++E
Sbjct: 389 --NSDL-VKRVSLAFLSLLDQLSSPSQLKGSKTFVLATSSQIDTLHPSIRRAGRLDNEVE 445
Query: 330 FPNPNEESRLDILKIHSRRM-NLMRGIDLKKIAEKMNGASGAEL 372
P+ ++RL+I++ + + + + +++ +A +G GA+L
Sbjct: 446 LGAPSSQARLEIVRCLIKSVEHQLSDEEVEHVASITHGYVGADL 489
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 515 (186.3 bits), Expect = 6.2e-49, P = 6.2e-49
Identities = 101/246 (41%), Positives = 154/246 (62%)
Query: 141 SKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLL 200
S+ +P V +VP T++ IGGL+ +E++E+++ P++HP+ F G+ KGVL
Sbjct: 455 SQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLF 514
Query: 201 YGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM 260
YGPPG GKTLLA+A+A+ FI + G EL+ + GE VRE+F AR+ AP ++F
Sbjct: 515 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFF 574
Query: 261 DEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLR 320
DE+DSI AR G+G R + ++L ++DG + ++ ATNR DI+D A+LR
Sbjct: 575 DELDSIAKAR-GGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILR 633
Query: 321 PGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAG 380
PGR+D+ I P P+E+SR+ ILK + R+ + + +DL +A+ NG SGA+L +C A
Sbjct: 634 PGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRAC 693
Query: 381 MFALRE 386
A+RE
Sbjct: 694 KLAIRE 699
Score = 451 (163.8 bits), Expect = 6.9e-42, P = 6.9e-42
Identities = 100/262 (38%), Positives = 162/262 (61%)
Query: 144 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGP 203
+P+ + E + + YD IGG +Q+ +IKE++ELP++HP LF+++G+ P+G+LLYGP
Sbjct: 187 EPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGP 246
Query: 204 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI-IFMDE 262
PGTGKTL+ARAVA+ T F ++G E++ K GEG R+ A + IF +
Sbjct: 247 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGEGESACRKKISPAPPPLKTAGIFKSD 306
Query: 263 IDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPG 322
D S + +G+ E +R + +LL +DG + + V+ ATNR + +D AL R G
Sbjct: 307 -DCFPSPQT-----HGEVE-RRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG 359
Query: 323 RIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMF 382
R DR+++ P+ RL+IL+IH++ M L +DL+++A + +G GA+L A+C+EA +
Sbjct: 360 RFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQ 419
Query: 383 ALRERRIHVTQEDFEMAVAKVM 404
A+R++ + ED E A+VM
Sbjct: 420 AIRKKMDLIDLED-ETIDAEVM 440
>MGI|MGI:1916847 [details] [associations]
symbol:Afg3l2 "AFG3(ATPase family gene 3)-like 2 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IGI] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008053 "mitochondrial fusion"
evidence=IGI] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016265 "death" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0021675 "nerve development" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IGI] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0042407 "cristae formation" evidence=IGI] [GO:0042552
"myelination" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IMP]
[GO:0060013 "righting reflex" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1916847
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
MEROPS:M41.007 EMBL:BC036999 EMBL:BC043056 IPI:IPI00170357
RefSeq:NP_081406.1 UniGene:Mm.426052 ProteinModelPortal:Q8JZQ2
SMR:Q8JZQ2 IntAct:Q8JZQ2 STRING:Q8JZQ2 PhosphoSite:Q8JZQ2
PaxDb:Q8JZQ2 PRIDE:Q8JZQ2 Ensembl:ENSMUST00000025408 GeneID:69597
KEGG:mmu:69597 UCSC:uc008fmf.1 InParanoid:Q8JZQ2 NextBio:329880
Bgee:Q8JZQ2 CleanEx:MM_AFG3L2 Genevestigator:Q8JZQ2
GermOnline:ENSMUSG00000024527 Uniprot:Q8JZQ2
Length = 802
Score = 497 (180.0 bits), Expect = 6.9e-49, Sum P(2) = 6.9e-49
Identities = 107/262 (40%), Positives = 161/262 (61%)
Query: 157 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216
D + + G ++ EI E + +K+P+ ++ LG PKG +L GPPGTGKTLLA+A A
Sbjct: 303 DVKFKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATA 361
Query: 217 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSG 276
+ FI VSGSE ++ ++G G VR+LF +AR++AP I+F+DEID++G R G G
Sbjct: 362 GEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKR---GRG 418
Query: 277 N--GDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPN 334
N G SE + T+ +LL ++DGF + + +L TNR DILD ALLRPGR DR+I P+
Sbjct: 419 NFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPD 478
Query: 335 EESRLDILKIHSRRMNLMRGIDLKKIAEKMN----GASGAELKAVCTEAGMFALRERRIH 390
+ R I K+H R + L ++ K+A K+ G SGA++ VC EA + A R
Sbjct: 479 IKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDA 538
Query: 391 VTQEDFEMAVAKV---MKKETE 409
+ ++ FE A+ +V ++K+T+
Sbjct: 539 INEKHFEQAIERVIGGLEKKTQ 560
Score = 41 (19.5 bits), Expect = 6.9e-49, Sum P(2) = 6.9e-49
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 3 AVGIETKQPESAAPEEVCAAKGASKQGEGLRQ 34
AVG E K+P+ + P+ A G + G ++
Sbjct: 92 AVG-EKKEPQPSGPQPSGGAGGGGGKRRGKKE 122
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
Identities = 102/258 (39%), Positives = 164/258 (63%)
Query: 159 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 218
T+ + G+D+ +E+ E++E ++ P+ F+ LG PKG LL GPPGTGKTLLA+A+A
Sbjct: 155 TFHDVAGIDEAKEELAEIVEF-LREPKKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGE 213
Query: 219 TDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNG 278
F +SGS+ V+ ++G G+ VR++F +++AP +IF+DEID++G R G G G
Sbjct: 214 AKVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAVGRHR-GVGFGGG 272
Query: 279 DSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR 338
+ E ++T+ +LL ++DGFEA+ + ++ ATNR D+LD ALLRPGR DR+I P+ R
Sbjct: 273 NDEREQTLNQLLVEMDGFEANEGVIIIAATNRPDVLDPALLRPGRFDRQITISIPDIAGR 332
Query: 339 LDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEM 398
IL++H +++ +++ IA G SGA+L + E+ + A R + VT EDFE
Sbjct: 333 QKILEVHLKKIPTAPNVEVSIIARGTPGFSGADLANLVNESALIAARRNKKVVTNEDFEY 392
Query: 399 AVAKVMKKETEKNMSLRK 416
A K++ K++ +R+
Sbjct: 393 ARDKILMGMERKSLVMRE 410
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 103/253 (40%), Positives = 160/253 (63%)
Query: 159 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 218
T+ + G+D+ +E+ E++E +K+P + LG PKGVLL+G PGTGKTLLARA+A
Sbjct: 156 TFADVAGIDEVKEELAEIVEF-LKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAGE 214
Query: 219 TDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNG 278
F +SGS+ V+ ++G G+ VR+LF A+++AP I+F+DEID++G R +G G G
Sbjct: 215 AGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQR-GAGLGGG 273
Query: 279 DSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR 338
E ++T+ +LL ++DGF ++ I ++ ATNR DILD ALLRPGR DR I P+ R
Sbjct: 274 HDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDTPDINGR 333
Query: 339 LDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEM 398
+ILK+H + L +DL +A + G +GA+L + EA + A R + + E+ E
Sbjct: 334 KEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARRNKKVINMEEMEE 393
Query: 399 AVAKVMKKETEKN 411
A+ +V+ +K+
Sbjct: 394 AIERVIAGPEKKS 406
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 103/253 (40%), Positives = 160/253 (63%)
Query: 159 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 218
T+ + G+D+ +E+ E++E +K+P + LG PKGVLL+G PGTGKTLLARA+A
Sbjct: 156 TFADVAGIDEVKEELAEIVEF-LKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAGE 214
Query: 219 TDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNG 278
F +SGS+ V+ ++G G+ VR+LF A+++AP I+F+DEID++G R +G G G
Sbjct: 215 AGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQR-GAGLGGG 273
Query: 279 DSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR 338
E ++T+ +LL ++DGF ++ I ++ ATNR DILD ALLRPGR DR I P+ R
Sbjct: 274 HDEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDTPDINGR 333
Query: 339 LDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEM 398
+ILK+H + L +DL +A + G +GA+L + EA + A R + + E+ E
Sbjct: 334 KEILKVHVKGKPLGDDVDLDVLARRTPGFTGADLANMVNEAALLAARRNKKVINMEEMEE 393
Query: 399 AVAKVMKKETEKN 411
A+ +V+ +K+
Sbjct: 394 AIERVIAGPEKKS 406
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 515 (186.3 bits), Expect = 1.1e-48, P = 1.1e-48
Identities = 131/371 (35%), Positives = 206/371 (55%)
Query: 55 NRLEAQRNELNSRVRMLKEELQLLQEPGS---YVGEVVKVMGKNKVLVKVHPEGKYVVXX 111
+RL+ + L RV L E +LLQ S YVG +KV+ L + + ++
Sbjct: 528 DRLDILQKLLR-RVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCAL----RRILKK 582
Query: 112 XXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIK 171
++ L++ ++ I PS + + ++ VP+ ++ IGGL+
Sbjct: 583 QPNLPDVKVAGLVKITLKDFLQAMNDIRPSAMREIA----ID-VPNVSWSDIGGLESIKL 637
Query: 172 EIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL 231
++++ +E P+KHPE F +GI PKGVLLYGPPG KT++A+A+A+ + F+ + G EL
Sbjct: 638 KLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPEL 697
Query: 232 VQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMES-GSGNGDSEVQRTMLELL 290
+ KY+GE R VRE F AR APSIIF DE+D++ R S G+GN R + +LL
Sbjct: 698 MNKYVGESERAVRETFRKARAVAPSIIFFDELDALAVERGSSLGAGN---VADRVLAQLL 754
Query: 291 NQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMN 350
++DG E + +L ATNR D +D+AL+RPGRIDR I P P+ +R +I K+ M
Sbjct: 755 TEMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMP 814
Query: 351 LMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE--RRIHVTQEDFEMAVAKVMKKET 408
+ +DL ++ + + SGAE+ AVC EA + AL E + + + F A++ V +
Sbjct: 815 VSNEVDLDELILQTDAYSGAEIVAVCREAALLALEEDIQANLIMKRHFTQALSTVTPRIP 874
Query: 409 EKNMSLRKLWK 419
E SLR+ ++
Sbjct: 875 E---SLRRFYE 882
Score = 507 (183.5 bits), Expect = 8.5e-48, P = 8.5e-48
Identities = 111/249 (44%), Positives = 160/249 (64%)
Query: 159 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 218
TYDMIGGL Q+K I+E+IELP+K PELF+S GI P+GVLLYGPPGTGKT++ARAVA+
Sbjct: 351 TYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANE 410
Query: 219 TDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNG 278
++G E++ K+ GE +R++F A PSIIF+DE+D++ R E
Sbjct: 411 VGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKR-EGAQNEV 469
Query: 279 DSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR 338
+ V ++L L++ + + ++ VL ATNR LD AL RPGR D++IE PN + R
Sbjct: 470 EKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDR 529
Query: 339 LDILKIHSRRM-NLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDF- 396
LDIL+ RR+ +L+ +L ++A +G GA+LK +C EAG+ ALR RI Q +
Sbjct: 530 LDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCALR--RILKKQPNLP 587
Query: 397 EMAVAKVMK 405
++ VA ++K
Sbjct: 588 DVKVAGLVK 596
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 103/264 (39%), Positives = 167/264 (63%)
Query: 149 LMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 208
+M +++ +T+ + G D+ +++KE+++ ++ P F+ LG P GVL+ GPPGTGK
Sbjct: 145 MMSEDQIK-TTFSDVAGCDEAKEDVKELVDY-LRDPSRFQKLGGKIPTGVLMVGPPGTGK 202
Query: 209 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 268
TLLA+A+A F +SGS+ V+ ++G G+ VR++F A++ +P IIF+DEID++G
Sbjct: 203 TLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGR 262
Query: 269 ARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKI 328
R +G G G E ++T+ ++L ++DGFE + I V+ ATNR D+LD ALLRPGR DR++
Sbjct: 263 QR-GAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQV 321
Query: 329 EFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR 388
P+ R ILK+H R++ L ++ IA G SGA+L + EA +FA R +
Sbjct: 322 VVGLPDVRGREQILKVHMRKVPLANDVEPSLIARGTPGFSGADLANLVNEAALFAARGNK 381
Query: 389 IHVTQEDFEMAVAKVMKKETEKNM 412
+V+ +FE+A K+M ++M
Sbjct: 382 RNVSMVEFELAKDKIMMGAERRSM 405
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 103/264 (39%), Positives = 167/264 (63%)
Query: 149 LMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGK 208
+M +++ +T+ + G D+ +++KE+++ ++ P F+ LG P GVL+ GPPGTGK
Sbjct: 145 MMSEDQIK-TTFSDVAGCDEAKEDVKELVDY-LRDPSRFQKLGGKIPTGVLMVGPPGTGK 202
Query: 209 TLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 268
TLLA+A+A F +SGS+ V+ ++G G+ VR++F A++ +P IIF+DEID++G
Sbjct: 203 TLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGR 262
Query: 269 ARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKI 328
R +G G G E ++T+ ++L ++DGFE + I V+ ATNR D+LD ALLRPGR DR++
Sbjct: 263 QR-GAGVGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQV 321
Query: 329 EFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR 388
P+ R ILK+H R++ L ++ IA G SGA+L + EA +FA R +
Sbjct: 322 VVGLPDVRGREQILKVHMRKVPLANDVEPSLIARGTPGFSGADLANLVNEAALFAARGNK 381
Query: 389 IHVTQEDFEMAVAKVMKKETEKNM 412
+V+ +FE+A K+M ++M
Sbjct: 382 RNVSMVEFELAKDKIMMGAERRSM 405
>UNIPROTKB|H0YJC0 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0017111
EMBL:AL133453 HGNC:HGNC:9553 Ensembl:ENST00000556813 Uniprot:H0YJC0
Length = 262
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 111/257 (43%), Positives = 152/257 (59%)
Query: 33 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVM 92
R LQ + L+ ++ L L Q EL + + +L+ LQ G VGEV+K +
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQL 64
Query: 93 GKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKV 152
+ K +VK +YVV P TRVAL + + LP +VDPLV M
Sbjct: 65 TEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSH 124
Query: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
E + +Y IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLA
Sbjct: 125 EDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 184
Query: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIG-SARM 271
RAVA DC F++V S +V KYIGE +R++RE+F AR+H P IIFMDEID+I A +
Sbjct: 185 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIDYEAIV 244
Query: 272 ESGSGNGDSEVQRTMLE 288
+ G ++++ E
Sbjct: 245 KLSDGFNGADLRNVCTE 261
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 112/288 (38%), Positives = 166/288 (57%)
Query: 138 ILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKG 197
I S V P +N ++P T+D +GGL K++++ +E PIKH F +GI+ +G
Sbjct: 263 IAKSVVGPSINRGITVEIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRG 322
Query: 198 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 257
+LL+GPPG KT LA+A A+ +F +S +EL Y+GEG ++R F AR +PSI
Sbjct: 323 ILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSI 382
Query: 258 IFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQA 317
IF DE D + R + S N + +R + LL ++DG E + I VL ATNR +D A
Sbjct: 383 IFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAA 442
Query: 318 LLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCT 377
L+RPGR D + P P+ E+R +IL++H+R M L +DL+KIAE+ + +GAEL+ +C
Sbjct: 443 LMRPGRFDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDLRKIAEETDLFTGAELEGLCR 502
Query: 378 EAGMFALRER--RIHVTQEDFEMAVAKVMK----KETEKNMSLRKLWK 419
E+G +LRE V F+ A + + +E E S RK K
Sbjct: 503 ESGTVSLRENIAATAVFNRHFQTAKSSLKPALTIEEVETYSSFRKAAK 550
Score = 410 (149.4 bits), Expect = 3.7e-38, P = 3.7e-38
Identities = 90/247 (36%), Positives = 146/247 (59%)
Query: 163 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 222
IGG ++ ++ ++E+I P ++P +LG+ P+G+LLYGPPGTGKT L RAV D
Sbjct: 24 IGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDAH 83
Query: 223 FIRVSGSELVQKYIGEGSRMVRELFVMAREHA----PSIIFMDEIDSIGSARMESGSGNG 278
I +S + + + GE +++RE F A HA PS+IF+DEID + R
Sbjct: 84 LIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRR--DARREQ 141
Query: 279 DSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR 338
D + + L++ ++ ++ V+ +TNR+D +D AL R GR D +E PNEE R
Sbjct: 142 DVRIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDR 201
Query: 339 LDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR--IHVTQEDF 396
L IL+++++++NL +DL+ IA NG GA+L+A+C EA + A + + +T +DF
Sbjct: 202 LKILQLYTKKVNLDPSVDLQAIAISCNGYVGADLEALCREATISASKRSSDSLILTSQDF 261
Query: 397 EMAVAKV 403
++A + V
Sbjct: 262 KIAKSVV 268
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 508 (183.9 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 104/250 (41%), Positives = 161/250 (64%)
Query: 155 VPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 214
+P +T+ + G+D+ ++E+ E+ + +++P +++LG PKGVLLYGPPGTGKTLLARA
Sbjct: 157 MPKTTFADVAGVDEAVEELYEIKDF-LQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARA 215
Query: 215 VAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESG 274
VA F +SGS+ V+ ++G G+ VR+LF A++++P IIF+DEID++G R +G
Sbjct: 216 VAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQR-GAG 274
Query: 275 SGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPN 334
G G E ++T+ +LL ++DGF + ++ ATNR DILD ALLRPGR DR+I NP+
Sbjct: 275 LGGGHDEREQTLNQLLVEMDGFGDRAGVILIAATNRPDILDPALLRPGRFDRQIPVSNPD 334
Query: 335 EESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQE 394
R +L++HS+ + DL +A++ G +GA+L V EA + RE +T
Sbjct: 335 LAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAALLTARENGTVITGP 394
Query: 395 DFEMAVAKVM 404
E AV +V+
Sbjct: 395 ALEEAVDRVI 404
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 510 (184.6 bits), Expect = 2.4e-48, P = 2.4e-48
Identities = 99/252 (39%), Positives = 169/252 (67%)
Query: 144 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGP 203
DP+ + E + + YD +GG+ +Q+ +IKE++ELP++HP+LF+++G+ P+G+LL+GP
Sbjct: 192 DPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGP 251
Query: 204 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEI 263
PGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F +++P+I+F+DEI
Sbjct: 252 PGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEI 311
Query: 264 DSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGR 323
D+I R ++ +G+ E +R + +LL +DG + + V+ ATNR + +D AL R GR
Sbjct: 312 DAIAPKREKA---HGEVE-KRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGR 367
Query: 324 IDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFA 383
DR+I+ P+ RL+IL+IH++ M L +DL+++A + +G GA+L ++C+EA +
Sbjct: 368 FDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQ 427
Query: 384 LRERRIHVTQED 395
+RE+ + ED
Sbjct: 428 IREKMELIDLED 439
Score = 489 (177.2 bits), Expect = 4.9e-46, P = 4.9e-46
Identities = 117/337 (34%), Positives = 182/337 (54%)
Query: 54 LNRLEAQRNELNSRVRMLKEELQLLQ---EPGSYVGEVVKVMGKNKVLVKVHPEGKYVVX 110
+ RLE R ++++ L E++ L Q E +VG + + + ++ E ++
Sbjct: 380 VGRLEILR--IHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIR-EKMELID 436
Query: 111 XXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQI 170
S V + N + + PS + V VE P++T+ IGGL
Sbjct: 437 LEDDTIDAEVLNSLAVTMENFRFAMGKSSPSALREAV----VE-TPNTTWSDIGGLQNVK 491
Query: 171 KEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSE 230
+E++E+++ P++HPE + G+ +GVL YGPPG GKTLLA+A+A+ FI + G E
Sbjct: 492 RELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE 551
Query: 231 LVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGS-GNGDSEVQRTMLEL 289
L+ + GE VR++F AR AP ++F DE+DSI AR GS G+ R + ++
Sbjct: 552 LLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKAR--GGSVGDAGGAADRVINQV 609
Query: 290 LNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRM 349
L ++DG A + ++ ATNR DI+D A+LRPGR+D+ I P P+E SRL I K R+
Sbjct: 610 LTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKT 669
Query: 350 NLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
L +DL +A+ G SGA+L +C A A+RE
Sbjct: 670 PLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRE 706
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 510 (184.6 bits), Expect = 2.4e-48, P = 2.4e-48
Identities = 99/252 (39%), Positives = 169/252 (67%)
Query: 144 DPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGP 203
DP+ + E + + YD +GG+ +Q+ +IKE++ELP++HP+LF+++G+ P+G+LL+GP
Sbjct: 192 DPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGP 251
Query: 204 PGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEI 263
PGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F +++P+I+F+DEI
Sbjct: 252 PGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEI 311
Query: 264 DSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGR 323
D+I R ++ +G+ E +R + +LL +DG + + V+ ATNR + +D AL R GR
Sbjct: 312 DAIAPKREKA---HGEVE-KRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGR 367
Query: 324 IDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFA 383
DR+I+ P+ RL+IL+IH++ M L +DL+++A + +G GA+L ++C+EA +
Sbjct: 368 FDREIDIGIPDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQ 427
Query: 384 LRERRIHVTQED 395
+RE+ + ED
Sbjct: 428 IREKMELIDLED 439
Score = 489 (177.2 bits), Expect = 4.9e-46, P = 4.9e-46
Identities = 117/337 (34%), Positives = 182/337 (54%)
Query: 54 LNRLEAQRNELNSRVRMLKEELQLLQ---EPGSYVGEVVKVMGKNKVLVKVHPEGKYVVX 110
+ RLE R ++++ L E++ L Q E +VG + + + ++ E ++
Sbjct: 380 VGRLEILR--IHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIR-EKMELID 436
Query: 111 XXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQI 170
S V + N + + PS + V VE P++T+ IGGL
Sbjct: 437 LEDDTIDAEVLNSLAVTMENFRFAMGKSSPSALREAV----VE-TPNTTWSDIGGLQNVK 491
Query: 171 KEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSE 230
+E++E+++ P++HPE + G+ +GVL YGPPG GKTLLA+A+A+ FI + G E
Sbjct: 492 RELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE 551
Query: 231 LVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGS-GNGDSEVQRTMLEL 289
L+ + GE VR++F AR AP ++F DE+DSI AR GS G+ R + ++
Sbjct: 552 LLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKAR--GGSVGDAGGAADRVINQV 609
Query: 290 LNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRM 349
L ++DG A + ++ ATNR DI+D A+LRPGR+D+ I P P+E SRL I K R+
Sbjct: 610 LTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKT 669
Query: 350 NLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
L +DL +A+ G SGA+L +C A A+RE
Sbjct: 670 PLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRE 706
>ASPGD|ASPL0000029469 [details] [associations]
symbol:AN5588 species:162425 "Emericella nidulans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0031942 "i-AAA
complex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:SEFDEVY EnsemblFungi:CADANIAT00003489
Uniprot:C8VG17
Length = 784
Score = 506 (183.2 bits), Expect = 5.2e-48, P = 5.2e-48
Identities = 107/242 (44%), Positives = 158/242 (65%)
Query: 163 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 222
+ G D+ E++E++E + +PE F SLG PKGVLL GPPGTGKTLLARAVA
Sbjct: 317 VHGCDEAKDELQELVEF-LLNPERFSSLGGKLPKGVLLVGPPGTGKTLLARAVAGEAGVP 375
Query: 223 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEV 282
F +SGSE + Y+G G++ VRELF AR +P+IIF+DE+D+IG+ R E + + V
Sbjct: 376 FFYMSGSEFDEVYVGVGAKRVRELFNQARSKSPAIIFIDELDAIGAKRNERDA----AYV 431
Query: 283 QRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDIL 342
++T+ +LL +LDGF S + +L ATN ++LD+AL RPGR DRK+ P+ R+DIL
Sbjct: 432 KQTLNQLLTELDGFSQSTGVIILAATNYPELLDKALTRPGRFDRKVVVDLPDVRGRMDIL 491
Query: 343 KIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAK 402
K H + + + +D+ IA +G SGA+L+ + +A +FA R ++ VT +DF+ A K
Sbjct: 492 KHHMKNVQISTDVDVAVIARGTSGFSGADLENLVNQAAIFASRNKQSKVTPKDFDYAKDK 551
Query: 403 VM 404
++
Sbjct: 552 II 553
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 490 (177.5 bits), Expect = 5.2e-48, Sum P(2) = 5.2e-48
Identities = 102/235 (43%), Positives = 144/235 (61%)
Query: 155 VPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 214
VPD+T+D IG L++ +E+K + P+K+PE+ E LG+ P GVLL GPPG GKTLLA+A
Sbjct: 656 VPDTTWDDIGALEKIREELKLAVLAPVKYPEMLERLGLTAPSGVLLCGPPGCGKTLLAKA 715
Query: 215 VAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESG 274
+A+ FI V G EL+ Y+GE R VR F AR AP +IF DE DS+ R + G
Sbjct: 716 IANEAGINFISVKGPELMNMYVGESERAVRACFQRARNSAPCVIFFDEFDSLCPKRSDGG 775
Query: 275 SGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPN 334
GN R + +LL ++DG E + +L ATNR DI+D A+LRPGR+D + P
Sbjct: 776 DGNNSGT--RIVNQLLTEMDGVEERKGVYILAATNRPDIIDPAILRPGRLDTILYVGFPE 833
Query: 335 EESRLDILKI---HSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
+ R +ILK + +R L +DL +IA + G +GA+L + +A MF+LR+
Sbjct: 834 QSERTEILKATTKNGKRPVLADDVDLDEIAAQTEGYTGADLAGLVKQASMFSLRQ 888
Score = 363 (132.8 bits), Expect = 2.9e-34, Sum P(2) = 2.9e-34
Identities = 83/242 (34%), Positives = 138/242 (57%)
Query: 156 PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAV 215
P ++ IGG+D +KE+ E++ + IK PE + LG+ +G+LL+GPPG GKT LARA+
Sbjct: 246 PTESFRDIGGMDSTLKELCEML-IHIKSPEFYFQLGLLPSRGLLLHGPPGCGKTFLARAI 304
Query: 216 AHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGS 275
+ + + +EL+ GE +RE+F A ++P ++F+DEID+IG R +
Sbjct: 305 SGQLKMPLMEIPATELIGGISGESEERIREVFDQAIGYSPCVLFIDEIDAIGGNRQWASK 364
Query: 276 GNGDSEVQRTMLELLNQLDGFEASN---KIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
D E +R + +L++ LD +A+ + V+ AT R D+LD L R GR D +I
Sbjct: 365 ---DME-RRIVSQLISSLDNLKANEFGQSVVVIAATTRPDVLDPGLRRIGRFDHEIAIHI 420
Query: 333 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVT 392
P+ + R +IL+I +++ ++ KIAE G GA+L A+ + A A++ R +
Sbjct: 421 PSRKERREILRIQCEGLSVDPKLNYDKIAELTPGYVGADLMALVSRAASVAVKRRSMKKF 480
Query: 393 QE 394
+E
Sbjct: 481 RE 482
Score = 46 (21.3 bits), Expect = 5.2e-48, Sum P(2) = 5.2e-48
Identities = 12/51 (23%), Positives = 25/51 (49%)
Query: 32 LRQYYLQHIHELQLQVRQKTHNLNRL--EAQRNELNSRVRMLKEELQLLQE 80
+++Y +HI E L V+Q T L + E R + +++ + ++ E
Sbjct: 17 VKKYLEEHIGETYLDVKQMTRELMQKYPEYSRRKFGPFRQLVHQAFSIISE 67
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 504 (182.5 bits), Expect = 7.1e-48, P = 7.1e-48
Identities = 128/356 (35%), Positives = 200/356 (56%)
Query: 57 LEAQRNELNS-RVRMLKEEL-QLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXX 114
L Q ++NS + ++ KEE+ + + YVG + + + V+ ++ G V
Sbjct: 408 LTKQFAKMNSEKCQITKEEIASIASKTHGYVGADLTALCRESVMKAIN-RGLTV------ 460
Query: 115 XXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIK 174
P T + + D V H LP ++ P ++P + IGG ++ +++
Sbjct: 461 -----GIPQTAIKVTVDD-VYHA-LP-EIRPSAMREIFLEMPKVHWSDIGGQEELKRKLI 512
Query: 175 EVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK 234
EV++LP++ + F++LG++ PKGVLLYGPPG KTL A+A+A + F+ V G E+ K
Sbjct: 513 EVVQLPLEASDSFKNLGVSSPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIFNK 572
Query: 235 YIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLD 294
Y+GE R +RE+F AR +PSIIF DEID+I R S S V + LLN++D
Sbjct: 573 YVGESERAIREIFRKARAASPSIIFFDEIDAIAGDRDGDSSTTAASNV---LTSLLNEID 629
Query: 295 GFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRG 354
G E + ++ ATN+ +D ALLRPGR+DR I P+ ++RL IL+ SR+ NL G
Sbjct: 630 GVEELKGVVIVGATNKPTEIDPALLRPGRLDRHIYVAPPDYDARLQILQKCSRKFNLQSG 689
Query: 355 ---IDLKKIAEKMNGASGAELKAVCTEAGMFALRERR--IHVTQEDFEMAVAKVMK 405
+DL+K+AE +G SGAE+ +C EAG+ A+ E + VT + FE A+ + +
Sbjct: 690 DESVDLQKLAELTDGCSGAEVTLLCQEAGLAAIMENKEATTVTNKHFEHALKGISR 745
Score = 476 (172.6 bits), Expect = 9.6e-45, P = 9.6e-45
Identities = 105/261 (40%), Positives = 161/261 (61%)
Query: 151 KVEKVPDS-TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 209
K +P TYD +GGL +QI+ +K IELP+ +P LF GI+ P+G+LL+GPPGTGKT
Sbjct: 218 KYPNLPQQITYDQVGGLSKQIELLKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTGKT 277
Query: 210 LLARAVAHH-TDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 268
+L R VA+ T+ + ++G +V KY+GE +R++F A++ PSIIFMDEIDSI
Sbjct: 278 MLLRCVANSITEAHVLTINGPSIVSKYLGETENAIRDIFNEAKKFQPSIIFMDEIDSIAP 337
Query: 269 ARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKI 328
+R SG +S R + +LL +DG + +I V+ ATNR + +D AL RPGR D+++
Sbjct: 338 SRTSDDSGETES---RVVAQLLTVMDGMGDNGRIVVIGATNRPNSIDSALRRPGRFDQEV 394
Query: 329 EFPNPNEESRLDIL-----KIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFA 383
E P+ E+R +IL K++S + + + ++ IA K +G GA+L A+C E+ M A
Sbjct: 395 EIGIPDVEAREEILTKQFAKMNSEKCQITKE-EIASIASKTHGYVGADLTALCRESVMKA 453
Query: 384 L-RERRIHVTQEDFEMAVAKV 403
+ R + + Q ++ V V
Sbjct: 454 INRGLTVGIPQTAIKVTVDDV 474
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 101/256 (39%), Positives = 162/256 (63%)
Query: 159 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 218
T++ + G+D+ +E+ E+++ +KH + F+ LG PKG LL G PGTGKTLLARA+A
Sbjct: 154 TFNDVAGIDEAKEELIEIVDF-LKHRQRFQKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 212
Query: 219 TDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNG 278
+ F +SGS+ V+ ++G G+ VR++F +++AP IIF+DEID++G R G G G
Sbjct: 213 ANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEIDAVGRHR-GIGLGGG 271
Query: 279 DSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR 338
+ E ++T+ +LL ++DGFE++ + ++ ATNR D+LD ALLRPGR DR++ P+ R
Sbjct: 272 NDEREQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRPGRFDRQVTISIPDINGR 331
Query: 339 LDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEM 398
I+ +H +++ ++++ IA G SGA+L + EA + A R + VT DFE
Sbjct: 332 EKIINVHIKKVPTAPDVNIRTIARGTPGFSGADLANLVNEAALIAARLNKKIVTMSDFEY 391
Query: 399 AVAKVMKKETEKNMSL 414
A KVM K++ +
Sbjct: 392 ARDKVMMGAERKSLMM 407
>TIGR_CMR|ECH_1098 [details] [associations]
symbol:ECH_1098 "ATP-dependent metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 GO:GO:0000910
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_507882.1 ProteinModelPortal:Q2GFA1
SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708 KEGG:ech:ECH_1098
PATRIC:20577534 BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 101/256 (39%), Positives = 162/256 (63%)
Query: 159 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 218
T++ + G+D+ +E+ E+++ +KH + F+ LG PKG LL G PGTGKTLLARA+A
Sbjct: 154 TFNDVAGIDEAKEELIEIVDF-LKHRQRFQKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 212
Query: 219 TDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNG 278
+ F +SGS+ V+ ++G G+ VR++F +++AP IIF+DEID++G R G G G
Sbjct: 213 ANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEIDAVGRHR-GIGLGGG 271
Query: 279 DSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR 338
+ E ++T+ +LL ++DGFE++ + ++ ATNR D+LD ALLRPGR DR++ P+ R
Sbjct: 272 NDEREQTLNQLLVEMDGFESNEGVIIIAATNRPDVLDSALLRPGRFDRQVTISIPDINGR 331
Query: 339 LDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEM 398
I+ +H +++ ++++ IA G SGA+L + EA + A R + VT DFE
Sbjct: 332 EKIINVHIKKVPTAPDVNIRTIARGTPGFSGADLANLVNEAALIAARLNKKIVTMSDFEY 391
Query: 399 AVAKVMKKETEKNMSL 414
A KVM K++ +
Sbjct: 392 ARDKVMMGAERKSLMM 407
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 507 (183.5 bits), Expect = 8.2e-48, P = 8.2e-48
Identities = 107/282 (37%), Positives = 173/282 (61%)
Query: 137 LILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPK 196
L+ ++V P V ++P + IGG + +++KE IE P+K+P+ F +GI PK
Sbjct: 598 LLALNQVKPSSMREVVVEIPKVFWGDIGGQEHIKQKLKEAIEWPLKYPQSFIRMGIKPPK 657
Query: 197 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS 256
G+LLYGPPG KTLLA+A+A + FI V G EL+ K++GE R VR++F AR+++PS
Sbjct: 658 GILLYGPPGCSKTLLAKALATESGLNFIAVKGPELLSKWVGESERAVRDIFKKARQNSPS 717
Query: 257 IIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQ 316
I+F DEID + +R SG G+G V+R + +LL ++DG + + ++ ATNR DI+D+
Sbjct: 718 ILFFDEIDGLAISR--SGEGSG--AVERVVSQLLTEMDGIQPLTNVTIIGATNRPDIIDK 773
Query: 317 ALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVC 376
A+LR GRIDR + P+ ++R +I IH +++ ID+ +++ +G SGAE+ ++C
Sbjct: 774 AILRAGRIDRILYISPPDLDARKEIFNIHLKKVPHSSDIDINQLSILTDGYSGAEVTSIC 833
Query: 377 TEAGMFALRE--RRIHVTQEDFEMAVAKVMKKETEKNMSLRK 416
EA + A++E + F A+ V K T++ + K
Sbjct: 834 REASIAAMKEDINAKEINMSHFISAIGNVKKGITQEMLDFYK 875
Score = 358 (131.1 bits), Expect = 1.0e-31, P = 1.0e-31
Identities = 90/246 (36%), Positives = 139/246 (56%)
Query: 123 STRVALRNDSYVLHLILPSKVDPLVNLM-----KVE--KVPDSTYDMIGGLDQQIKEIKE 175
ST++ L N + LI S ++ N K++ K + + IGGLD Q+K+I+E
Sbjct: 267 STKIKLINSNLQSTLICESTINSNNNNNNNSNNKIDNNKNINLNFQSIGGLDLQVKQIRE 326
Query: 176 VIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKY 235
+I+L +L +S G+ PKG+LLYGPPGTGKTLLAR VA T+ T ++G++++ K+
Sbjct: 327 LIDLSFYKLDLLKSFGVKPPKGILLYGPPGTGKTLLARIVATQTNATLFTINGADILDKF 386
Query: 236 IGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLN---- 291
G + ++++F A + +PSIIF+DE+D++ R E S + + ++L L++
Sbjct: 387 YGMTEKTLQKIFKDAAQKSPSIIFIDELDALCPKR-EDNSSEVEKRIVGSLLTLMDGVVS 445
Query: 292 ---QLDGFEASN----------KIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR 338
Q DG N K+ V+ TNR D +D AL RPGR D +IE PN++ R
Sbjct: 446 TSDQNDGGGGDNGNGNGNCGGDKVIVIGCTNRPDSIDSALRRPGRFDNEIEISIPNQQGR 505
Query: 339 LDILKI 344
IL I
Sbjct: 506 EQILNI 511
Score = 156 (60.0 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 41/121 (33%), Positives = 69/121 (57%)
Query: 300 NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIH-SRRMNLMRGIDLK 358
+K+ V+ TNR D +D AL RPGR D +IE PN++ R IL I S+ N + ++
Sbjct: 467 DKVIVIGCTNRPDSIDSALRRPGRFDNEIEISIPNQQGREQILNIFLSKIPNQLTSQEIA 526
Query: 359 KIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFE-MAVAKVMK-KETEKNMSLRK 416
IA K +G GA+++++C EA + + + Q+ F+ + + K K KE ++ +L+
Sbjct: 527 MIASKTHGFVGADIESLCKEASLKCFNRIK-NENQKLFQSINIEKEEKGKEEKQEENLQN 585
Query: 417 L 417
L
Sbjct: 586 L 586
>FB|FBgn0036702 [details] [associations]
symbol:CG6512 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046331
"lateral inhibition" evidence=IMP] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AE014296
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0030163 GO:GO:0046331
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OMA:YSEDTAM HSSP:Q9LCZ4 UniGene:Dm.986 GeneID:39922
KEGG:dme:Dmel_CG6512 FlyBase:FBgn0036702 GenomeRNAi:39922
NextBio:816090 EMBL:AY084199 RefSeq:NP_730248.2 SMR:Q8T4G5
IntAct:Q8T4G5 MINT:MINT-1004758 STRING:Q8T4G5
EnsemblMetazoa:FBtr0075251 UCSC:CG6512-RA InParanoid:Q8T4G5
Uniprot:Q8T4G5
Length = 826
Score = 505 (182.8 bits), Expect = 9.6e-48, P = 9.6e-48
Identities = 107/253 (42%), Positives = 159/253 (62%)
Query: 163 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 222
+ G ++ EI E + +K+P+ + LG PKG +L GPPGTGKTLLA+A A +
Sbjct: 330 VAGCEEAKIEIMEFVNF-LKNPQQYIDLGAKIPKGAMLTGPPGTGKTLLAKATAGEANVP 388
Query: 223 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEV 282
FI VSGSE ++ ++G G VR++F MAR+HAP I+F+DEID++G R G G SE
Sbjct: 389 FITVSGSEFLEMFVGVGPSRVRDMFAMARKHAPCILFIDEIDAVGRKRGGKTFG-GHSEQ 447
Query: 283 QRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDIL 342
+ T+ +LL ++DGF + + VL ATNR+DILD+AL+RPGR DR+I P P+ + R I
Sbjct: 448 ENTLNQLLVEMDGFNTTTNVVVLAATNRVDILDKALMRPGRFDRQIYVPAPDIKGRASIF 507
Query: 343 KIHSRRMNLMRGIDLKKIAEKMN----GASGAELKAVCTEAGMFALRERRIHVTQEDFEM 398
K+H NL +D +++ KM G +GA++ VC EA + A R+ + + + FE
Sbjct: 508 KVHLG--NLKTSLDKNELSRKMAALTPGFTGADIANVCNEAALIAARDSKDSIVLKHFEQ 565
Query: 399 AVAKV---MKKET 408
A+ +V M+K+T
Sbjct: 566 AIERVIAGMEKKT 578
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 105/248 (42%), Positives = 157/248 (63%)
Query: 156 PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAV 215
P TYDMIGGL Q+K I+E +ELP+K ELF+S GI+ P+GVLLYGPPGTGKTL+A+A+
Sbjct: 313 PQVTYDMIGGLSSQLKTIRETVELPLKRAELFKSYGISPPRGVLLYGPPGTGKTLIAKAI 372
Query: 216 AHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGS 275
A+ ++G E++ K+ GE +R++F A PSIIF+DE+D++ R E
Sbjct: 373 ANEVGAHVTVINGPEIISKFYGESESRLRQIFAEASLRRPSIIFIDELDALCPKR-EGAQ 431
Query: 276 GNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNE 335
+ V ++L L++ + + ++ VL ATNR LD AL RPGR D++IE PN
Sbjct: 432 NEVEKRVVASLLTLMDGIGSEGSEGQLVVLGATNRPHALDAALRRPGRFDKEIEIGIPNA 491
Query: 336 ESRLDIL-KIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE---RRIHV 391
+ RLDIL K+ + + + ++ ++A+ +G GA+L A+C EAG++ALR +R H
Sbjct: 492 QDRLDILQKLLKKVPHSLTAAEMMQLADSAHGYVGADLAALCKEAGLYALRRALGKRAHP 551
Query: 392 TQEDFEMA 399
+ D E+A
Sbjct: 552 S--DTEVA 557
Score = 307 (113.1 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 58/119 (48%), Positives = 81/119 (68%)
Query: 155 VPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 214
VP ++ IGGL+ ++K+ +E P+KHP+ F +GI PKGVLLYGPPG KT++A+A
Sbjct: 586 VPKVSWSDIGGLEDVKLKLKQAVEWPLKHPDSFIRMGIQPPKGVLLYGPPGCSKTMIAKA 645
Query: 215 VAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMES 273
+AH + F+ V G EL+ KY+GE R VRE+F AR +PSI+F DEID++ R S
Sbjct: 646 LAHESGLNFLAVKGPELMNKYVGESERAVREIFRKARMVSPSILFFDEIDALAVERGNS 704
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 504 (182.5 bits), Expect = 1.0e-47, P = 1.0e-47
Identities = 109/262 (41%), Positives = 162/262 (61%)
Query: 157 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216
D + + G ++ EI E + +K+P+ ++ LG PKG +L GPPGTGKTLLA+A A
Sbjct: 299 DVKFKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATA 357
Query: 217 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSG 276
+ FI V+GSE ++ ++G G VR+LFV+AR++AP I+F+DEID++G R G G
Sbjct: 358 GEANVPFITVNGSEFLEMFVGVGPARVRDLFVLARKNAPCILFIDEIDAVGRKR---GRG 414
Query: 277 N--GDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPN 334
N G SE + T+ +LL ++DGF + + VL TNR DILD AL+RPGR DR+I P+
Sbjct: 415 NFGGQSEQENTLNQLLVEMDGFNTATNVVVLAGTNRPDILDPALMRPGRFDRQIYIGPPD 474
Query: 335 EESRLDILKIHSRRMNLMRGIDLKKIAEKMN----GASGAELKAVCTEAGMFALRERRIH 390
+ R I K+H R + L +D + +A KM G SGA++ VC EA + A R
Sbjct: 475 IKGRASIFKVHLRPLKLEAELDKEALARKMAALTPGFSGADIANVCNEAALIAARHLSDA 534
Query: 391 VTQEDFEMAVAKV---MKKETE 409
+ Q+ FE A+ +V ++K+T+
Sbjct: 535 INQKHFEQAIERVIGGLEKKTQ 556
>WB|WBGene00004978 [details] [associations]
symbol:spg-7 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0008270 GO:GO:0006508
GO:GO:0000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0030968
EMBL:FO081580 HSSP:Q9LCZ4 RefSeq:NP_491165.2
ProteinModelPortal:Q9N3T5 SMR:Q9N3T5 STRING:Q9N3T5 MEROPS:M41.A10
PaxDb:Q9N3T5 EnsemblMetazoa:Y47G6A.10 GeneID:171915
KEGG:cel:CELE_Y47G6A.10 UCSC:Y47G6A.10 CTD:171915
WormBase:Y47G6A.10 InParanoid:Q9N3T5 NextBio:873225 Uniprot:Q9N3T5
Length = 782
Score = 503 (182.1 bits), Expect = 1.1e-47, P = 1.1e-47
Identities = 104/257 (40%), Positives = 160/257 (62%)
Query: 163 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 222
+ G ++ EI E + +K+P+ ++ LG PKG +L GPPGTGKTLLA+A A +
Sbjct: 295 VAGCEEAKIEIMEFVNF-LKNPQQYKDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVP 353
Query: 223 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEV 282
FI VSGSE ++ ++G G VR++F MAR+++P I+F+DEID++G R G G SE
Sbjct: 354 FITVSGSEFLEMFVGVGPARVRDMFSMARKNSPCILFIDEIDAVGRKRGGKGGMGGHSEQ 413
Query: 283 QRTMLELLNQLDGFEAS-NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDI 341
+ T+ +LL ++DGF + + V+ ATNR+DILD ALLRPGR DR+I P P+ + R I
Sbjct: 414 ENTLNQLLVEMDGFTTDESSVIVIAATNRVDILDSALLRPGRFDRQIYVPVPDIKGRASI 473
Query: 342 LKIH--SRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMA 399
++H R +L + + +K+A G SGA++ VC EA + A R+ ++ + FE A
Sbjct: 474 FRVHLGPLRTSLDKTVLSRKLAAHTPGFSGADISNVCNEAALIAARDANHEISNKHFEQA 533
Query: 400 VAKVMKKETEKNMSLRK 416
+ +V+ +K L+K
Sbjct: 534 IERVVAGMEKKTQVLQK 550
>DICTYBASE|DDB_G0284249 [details] [associations]
symbol:DDB_G0284249 "peptidase M41, FtsH
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0044351 "macropinocytosis" evidence=RCA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284249 GO:GO:0016021 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0006461 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:AAFI02000064 RefSeq:XP_638674.1 ProteinModelPortal:Q54PX1
SMR:Q54PX1 MEROPS:M41.A17 EnsemblProtists:DDB0229917 GeneID:8624503
KEGG:ddi:DDB_G0284249 InParanoid:Q54PX1 OMA:VSIYGMN
ProtClustDB:CLSZ2846729 Uniprot:Q54PX1
Length = 764
Score = 502 (181.8 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 107/266 (40%), Positives = 162/266 (60%)
Query: 151 KVEKVPDST-YDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKT 209
K EK + + + GL + EI+E + +K+P+ F +G P+G +L GPPGTGKT
Sbjct: 291 KFEKSTSTVKFSDVAGLGEAKVEIEEFVNF-LKNPKKFHDIGAKIPRGAILVGPPGTGKT 349
Query: 210 LLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 269
L+A+A A + F SGS+ V+ ++G G VR+LF AR++AP I+F+DEID++G A
Sbjct: 350 LIAKATAGEANVPFYSTSGSDFVEMFVGVGPSRVRDLFEQARKNAPCIVFIDEIDAVGRA 409
Query: 270 RMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIE 329
R + G + E + T+ +LL ++DGF+ + VL ATNR DILD+ALLRPGR DR+I
Sbjct: 410 RGKGGFSGSNDERENTLNQLLVEMDGFKPLKNVVVLAATNRPDILDKALLRPGRFDRQIT 469
Query: 330 FPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMN-GASGAELKAVCTEAGMFALRERR 388
NP+ +SR +I ++H + L + I+ + K+ G SGA++ VC EA + A R
Sbjct: 470 IDNPDLKSREEIFRVHLAALLLDKSINYAERLSKLTPGFSGADIANVCNEAALIAARRHA 529
Query: 389 IHVTQEDFEMAVAKVMKKETEKNMSL 414
+T E F+ AV +V+ +KN L
Sbjct: 530 EIITLEHFDAAVDRVIGGLEKKNKVL 555
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 107/262 (40%), Positives = 160/262 (61%)
Query: 157 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216
D + + G ++ EI E + +K+P+ +E LG PKG +L GPPGTGKTLLA+A A
Sbjct: 148 DVKFKDVAGCEEAKLEIMEFVNF-LKNPKQYEDLGAKIPKGAILTGPPGTGKTLLAKATA 206
Query: 217 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSG 276
+ FI V+GSE ++ ++G G VR+LF +AR++AP I+F+DEID++G R G G
Sbjct: 207 GEANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKR---GRG 263
Query: 277 N--GDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPN 334
N G SE + T+ +LL ++DGF + + +L TNR DILD AL+RPGR DR+I P+
Sbjct: 264 NFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIYIGPPD 323
Query: 335 EESRLDILKIHSRRMNLMRGIDLKKIAEKMN----GASGAELKAVCTEAGMFALRERRIH 390
+ R I K+H R + L +D +A K+ G SGA++ VC EA + A R
Sbjct: 324 IKGRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSGADIANVCNEAALIAARHLSDA 383
Query: 391 VTQEDFEMAVAKV---MKKETE 409
+ Q+ FE A+ +V ++K+T+
Sbjct: 384 INQKHFEQAIERVIGGLEKKTQ 405
>UNIPROTKB|E2QYF3 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0042407 "cristae
formation" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
EMBL:AAEX03005521 RefSeq:XP_547682.2 ProteinModelPortal:E2QYF3
Ensembl:ENSCAFT00000029872 GeneID:490560 KEGG:cfa:490560
Uniprot:E2QYF3
Length = 806
Score = 501 (181.4 bits), Expect = 2.3e-47, P = 2.3e-47
Identities = 107/262 (40%), Positives = 162/262 (61%)
Query: 157 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216
D + + G ++ EI E + +K+P+ ++ LG PKG +L GPPGTGKTLLA+A A
Sbjct: 305 DVKFKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATA 363
Query: 217 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSG 276
+ FI VSGSE ++ ++G G VR+LF +AR++AP I+F+DEID++G R G G
Sbjct: 364 GEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKR---GRG 420
Query: 277 N--GDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPN 334
N G SE + T+ +LL ++DGF + + +L TNR DILD AL+RPGR DR+I P+
Sbjct: 421 NFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFIGPPD 480
Query: 335 EESRLDILKIHSRRMNLMRGIDLKKIAEKMN----GASGAELKAVCTEAGMFALRERRIH 390
+ R I K+H R + L ++ +K+A K+ G SGA++ VC EA + A R
Sbjct: 481 IKGRASIFKVHLRPLKLDSALEKEKLARKLASLTPGFSGADVANVCNEAALIAARHLSDS 540
Query: 391 VTQEDFEMAVAKV---MKKETE 409
+ Q+ FE A+ +V ++K+T+
Sbjct: 541 INQKHFEQAIERVIGGLEKKTQ 562
>POMBASE|SPBC543.09 [details] [associations]
symbol:yta12 "mitochondrial m-AAA protease Yta12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005745 "m-AAA complex" evidence=ISO] [GO:0006091 "generation
of precursor metabolites and energy" evidence=NAS] [GO:0006465
"signal peptide processing" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0033108 "mitochondrial respiratory chain complex
assembly" evidence=ISO] [GO:0045041 "protein import into
mitochondrial intermembrane space" evidence=ISO] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC543.09
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0004222 GO:GO:0006091
GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
KO:K08956 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 OMA:LYRFVTT
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0045041 GO:GO:0006465
GO:GO:0033108 RefSeq:NP_596797.1 ProteinModelPortal:Q9HGM3
SMR:Q9HGM3 STRING:Q9HGM3 MEROPS:M41.A14 EnsemblFungi:SPBC543.09.1
GeneID:2541079 KEGG:spo:SPBC543.09 NextBio:20802192 Uniprot:Q9HGM3
Length = 773
Score = 499 (180.7 bits), Expect = 2.8e-47, P = 2.8e-47
Identities = 103/243 (42%), Positives = 149/243 (61%)
Query: 163 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 222
+ G+D+ +EI E ++ +K+P+ +E LG P+G +L GPPGTGKTLLA+A A +
Sbjct: 298 VAGVDEAKEEIMEFVKF-LKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEANVP 356
Query: 223 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEV 282
F+ VSGSE ++ ++G G VR+LF AR++AP IIF+DEID+IG AR G + E
Sbjct: 357 FLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEIDAIGKARGRGGQFGSNDER 416
Query: 283 QRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDIL 342
+ T+ +LL ++DGF +S I V TNR D+LD ALLRPGR DR+I P+ R I
Sbjct: 417 ESTLNQLLVEMDGFTSSEHIVVFAGTNRPDVLDPALLRPGRFDRQITIDRPDIGGREQIF 476
Query: 343 KIHSRRMNLMRGIDL--KKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAV 400
K+H + + IDL K++A +G +GA++ VC E + A R V FE A+
Sbjct: 477 KVHLKHIKAADNIDLIAKRLAVLTSGFTGADIMNVCNEGALIAARSNSNEVQMVHFEQAI 536
Query: 401 AKV 403
+V
Sbjct: 537 ERV 539
>UNIPROTKB|Q9Y4W6 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9606 "Homo
sapiens" [GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051082 "unfolded protein binding" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0008219 DrugBank:DB00171 GO:GO:0007528 GO:GO:0051082
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 eggNOG:COG0465
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 GO:GO:0021675 GO:GO:0060013 EMBL:Y18314 EMBL:BC065016
IPI:IPI00001091 RefSeq:NP_006787.2 UniGene:Hs.726355 PDB:2LNA
PDBsum:2LNA ProteinModelPortal:Q9Y4W6 SMR:Q9Y4W6 IntAct:Q9Y4W6
MINT:MINT-1161944 STRING:Q9Y4W6 MEROPS:M41.007 PhosphoSite:Q9Y4W6
DMDM:126302516 PaxDb:Q9Y4W6 PeptideAtlas:Q9Y4W6 PRIDE:Q9Y4W6
Ensembl:ENST00000269143 GeneID:10939 KEGG:hsa:10939 UCSC:uc002kqz.2
GeneCards:GC18M012328 H-InvDB:HIX0027367 HGNC:HGNC:315
HPA:HPA004479 HPA:HPA004480 MIM:604581 MIM:610246 MIM:614487
neXtProt:NX_Q9Y4W6 Orphanet:101109 PharmGKB:PA24612
InParanoid:Q9Y4W6 PhylomeDB:Q9Y4W6 GenomeRNAi:10939 NextBio:41551
ArrayExpress:Q9Y4W6 Bgee:Q9Y4W6 CleanEx:HS_AFG3L2
Genevestigator:Q9Y4W6 GermOnline:ENSG00000141385 Uniprot:Q9Y4W6
Length = 797
Score = 499 (180.7 bits), Expect = 3.5e-47, P = 3.5e-47
Identities = 108/262 (41%), Positives = 161/262 (61%)
Query: 157 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216
D + + G ++ EI E + +K+P+ ++ LG PKG +L GPPGTGKTLLA+A A
Sbjct: 304 DVKFKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATA 362
Query: 217 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSG 276
+ FI VSGSE ++ ++G G VR+LF +AR++AP I+F+DEID++G R G G
Sbjct: 363 GEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKR---GRG 419
Query: 277 N--GDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPN 334
N G SE + T+ +LL ++DGF + + +L TNR DILD ALLRPGR DR+I P+
Sbjct: 420 NFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPD 479
Query: 335 EESRLDILKIHSRRMNLMRGIDLKKIAEKMN----GASGAELKAVCTEAGMFALRERRIH 390
+ R I K+H R + L ++ K+A K+ G SGA++ VC EA + A R
Sbjct: 480 IKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDS 539
Query: 391 VTQEDFEMAVAKV---MKKETE 409
+ Q+ FE A+ +V ++K+T+
Sbjct: 540 INQKHFEQAIERVIGGLEKKTQ 561
>UNIPROTKB|Q2KJI7 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9913 "Bos
taurus" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0046872 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 MEROPS:M41.016
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:BC105322 IPI:IPI00686580 RefSeq:NP_001039676.1 UniGene:Bt.1657
HSSP:Q9WZ49 ProteinModelPortal:Q2KJI7 SMR:Q2KJI7 STRING:Q2KJI7
PRIDE:Q2KJI7 Ensembl:ENSBTAT00000031029 GeneID:515757
KEGG:bta:515757 CTD:10939 InParanoid:Q2KJI7 OMA:LYRFVTT
NextBio:20871990 GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
Uniprot:Q2KJI7
Length = 805
Score = 499 (180.7 bits), Expect = 3.8e-47, P = 3.8e-47
Identities = 107/262 (40%), Positives = 162/262 (61%)
Query: 157 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216
D + + G ++ EI E + +K+P+ ++ LG PKG +L GPPGTGKTLLA+A A
Sbjct: 305 DVKFKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATA 363
Query: 217 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSG 276
+ FI VSGSE ++ ++G G VR+LF +AR++AP I+F+DEID++G R G G
Sbjct: 364 GEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKR---GRG 420
Query: 277 N--GDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPN 334
N G SE + T+ +LL ++DGF + + +L TNR DILD AL+RPGR DR+I P+
Sbjct: 421 NFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFIGPPD 480
Query: 335 EESRLDILKIHSRRMNLMRGIDLKKIAEKMN----GASGAELKAVCTEAGMFALRERRIH 390
+ R I K+H R + L ++ +K+A K+ G SGA++ VC EA + A R
Sbjct: 481 IKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAALIAARHLSDS 540
Query: 391 VTQEDFEMAVAKV---MKKETE 409
+ Q+ FE A+ +V ++K+T+
Sbjct: 541 INQKHFEQAIERVIGGLEKKTQ 562
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 492 (178.3 bits), Expect = 5.4e-47, P = 5.4e-47
Identities = 108/263 (41%), Positives = 162/263 (61%)
Query: 157 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPK-GVLLYGPPGTGKTLLARAV 215
D + + G ++ EI E + +K+P+ ++ LG PK G +L GPPGTGKTLLA+A
Sbjct: 95 DVKFKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKKGAILTGPPGTGKTLLAKAT 153
Query: 216 AHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGS 275
A + FI VSGSE ++ ++G G VR+LF +AR++AP I+F+DEID++G R G
Sbjct: 154 AGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKR---GR 210
Query: 276 GN--GDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNP 333
GN G SE + T+ +LL ++DGF + + +L TNR DILD ALLRPGR DR+I P
Sbjct: 211 GNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPP 270
Query: 334 NEESRLDILKIHSRRMNLMRGIDLKKIAEKMN----GASGAELKAVCTEAGMFALRERRI 389
+ + R I K+H R + L ++ +K+A K+ G SGA++ VC EA + A R
Sbjct: 271 DIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAALIAARHLSD 330
Query: 390 HVTQEDFEMAVAKV---MKKETE 409
+ Q+ FE A+ +V ++K+T+
Sbjct: 331 SINQKHFEQAIERVIGGLEKKTQ 353
>UNIPROTKB|F1LN92 [details] [associations]
symbol:Afg3l2 "Protein Afg3l2" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0021675 "nerve development" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1305259
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
IPI:IPI00192903 RefSeq:NP_001128336.1 UniGene:Rn.8386
ProteinModelPortal:F1LN92 PRIDE:F1LN92 Ensembl:ENSRNOT00000024632
GeneID:307350 KEGG:rno:307350 NextBio:657254 ArrayExpress:F1LN92
Uniprot:F1LN92
Length = 802
Score = 497 (180.0 bits), Expect = 6.1e-47, P = 6.1e-47
Identities = 107/262 (40%), Positives = 161/262 (61%)
Query: 157 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216
D + + G ++ EI E + +K+P+ ++ LG PKG +L GPPGTGKTLLA+A A
Sbjct: 303 DVKFKDVAGCEEAKLEIMEFVNF-LKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATA 361
Query: 217 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSG 276
+ FI VSGSE ++ ++G G VR+LF +AR++AP I+F+DEID++G R G G
Sbjct: 362 GEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKR---GRG 418
Query: 277 N--GDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPN 334
N G SE + T+ +LL ++DGF + + +L TNR DILD ALLRPGR DR+I P+
Sbjct: 419 NFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPD 478
Query: 335 EESRLDILKIHSRRMNLMRGIDLKKIAEKMN----GASGAELKAVCTEAGMFALRERRIH 390
+ R I K+H R + L ++ K+A K+ G SGA++ VC EA + A R
Sbjct: 479 IKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDA 538
Query: 391 VTQEDFEMAVAKV---MKKETE 409
+ ++ FE A+ +V ++K+T+
Sbjct: 539 INEKHFEQAIERVIGGLEKKTQ 560
>UNIPROTKB|E1BZ74 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0042407 "cristae formation" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0008270 GO:GO:0006508
GO:GO:0040014 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 GO:GO:0016265
GO:GO:0060013 EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00603273 Ensembl:ENSGALT00000022474 ArrayExpress:E1BZ74
Uniprot:E1BZ74
Length = 805
Score = 496 (179.7 bits), Expect = 8.0e-47, P = 8.0e-47
Identities = 107/262 (40%), Positives = 160/262 (61%)
Query: 157 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216
D + + G ++ EI E + +K+P+ +E LG PKG +L GPPGTGKTLLA+A A
Sbjct: 304 DVKFKDVAGCEEAKLEIMEFVNF-LKNPKQYEDLGAKIPKGAILTGPPGTGKTLLAKATA 362
Query: 217 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSG 276
+ FI V+GSE ++ ++G G VR+LF +AR++AP I+F+DEID++G R G G
Sbjct: 363 GEANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKR---GRG 419
Query: 277 N--GDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPN 334
N G SE + T+ +LL ++DGF + + +L TNR DILD AL+RPGR DR+I P+
Sbjct: 420 NFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIYIGPPD 479
Query: 335 EESRLDILKIHSRRMNLMRGIDLKKIAEKMN----GASGAELKAVCTEAGMFALRERRIH 390
+ R I K+H R + L +D +A K+ G SGA++ VC EA + A R
Sbjct: 480 IKGRASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSGADIANVCNEAALIAARHLSDA 539
Query: 391 VTQEDFEMAVAKV---MKKETE 409
+ Q+ FE A+ +V ++K+T+
Sbjct: 540 INQKHFEQAIERVIGGLEKKTQ 561
>SGD|S000000819 [details] [associations]
symbol:AFG3 "Component, with Yta12p, of the mitochondrial
inner membrane m-AAA pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS;IMP;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA;IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA;IMP]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IDA] [GO:0001302 "replicative cell
aging" evidence=IMP] [GO:0002181 "cytoplasmic translation"
evidence=IMP] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=IMP] [GO:0006465 "signal peptide processing" evidence=IMP]
[GO:0005745 "m-AAA complex" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 SGD:S000000819
GO:GO:0005524 GO:GO:0006461 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0001302 GO:GO:0004222
GO:GO:0016887 EMBL:BK006939 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
TIGRFAMs:TIGR01241 OMA:LYRFVTT EMBL:X81066 EMBL:X76643 EMBL:U18778
PIR:S46611 RefSeq:NP_010933.1 ProteinModelPortal:P39925 SMR:P39925
DIP:DIP-802N IntAct:P39925 MINT:MINT-563722 STRING:P39925
MEROPS:M41.002 PaxDb:P39925 PeptideAtlas:P39925
EnsemblFungi:YER017C GeneID:856737 KEGG:sce:YER017C CYGD:YER017c
OrthoDB:EOG4J14HG NextBio:982861 Genevestigator:P39925
GermOnline:YER017C GO:GO:0005745 GO:GO:0097002 GO:GO:0002181
GO:GO:0045041 GO:GO:0006465 Uniprot:P39925
Length = 761
Score = 494 (179.0 bits), Expect = 9.0e-47, P = 9.0e-47
Identities = 105/265 (39%), Positives = 160/265 (60%)
Query: 159 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 218
++ + G D+ +EI E + +K+P + LG P+G +L GPPGTGKTLLA+A A
Sbjct: 286 SFKNVAGCDEAKQEIMEFVHF-LKNPGKYTKLGAKIPRGAILSGPPGTGKTLLAKATAGE 344
Query: 219 TDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGS-GN 277
+ F+ VSGSE V+ ++G G+ VR+LF AR APSIIF+DEID+IG R + G+ G
Sbjct: 345 ANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEIDAIGKERGKGGALGG 404
Query: 278 GDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEES 337
+ E + T+ +LL ++DGF S+++ VL TNR D+LD AL+RPGR DR I+ +P+
Sbjct: 405 ANDEREATLNQLLVEMDGFTTSDQVVVLAGTNRPDVLDNALMRPGRFDRHIQIDSPDVNG 464
Query: 338 RLDILKIHSRRMNL--MRGIDLKKIAEKMN----GASGAELKAVCTEAGMFALRERRIHV 391
R I +H +R+NL + D+ ++ K+ G +GA++ C EA + A R ++
Sbjct: 465 RQQIYLVHLKRLNLDPLLTDDMNNLSGKLATLTPGFTGADIANACNEAALIAARHNDPYI 524
Query: 392 TQEDFEMAVAKVMKKETEKNMSLRK 416
T FE A+ +V+ +K L K
Sbjct: 525 TIHHFEQAIERVIAGLEKKTRVLSK 549
>TAIR|locus:2138146 [details] [associations]
symbol:FtsHi1 "FTSH inactive protease 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008237 "metallopeptidase
activity" evidence=ISS] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0007020 "microtubule nucleation"
evidence=RCA] [GO:0010020 "chloroplast fission" evidence=IMP]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0051301 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
eggNOG:COG0465 GO:GO:0017111 GO:GO:0010020 EMBL:AC002343
EMBL:AL078468 EMBL:AL161560 HSSP:Q9LCZ4 IPI:IPI00537043 PIR:T08913
RefSeq:NP_567691.1 UniGene:At.3392 ProteinModelPortal:O22993
SMR:O22993 PaxDb:O22993 PRIDE:O22993 EnsemblPlants:AT4G23940.1
GeneID:828494 KEGG:ath:AT4G23940 TAIR:At4g23940
HOGENOM:HOG000029491 InParanoid:O22993 OMA:QMAGSEF PhylomeDB:O22993
ProtClustDB:CLSN2689578 ArrayExpress:O22993 Genevestigator:O22993
Uniprot:O22993
Length = 946
Score = 496 (179.7 bits), Expect = 1.7e-46, P = 1.7e-46
Identities = 104/259 (40%), Positives = 159/259 (61%)
Query: 163 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 222
+ G+D+ + E++E+++ +K+P+LF+ +GI P GVLL GPPG GKTL+A+A+A
Sbjct: 432 VAGIDEAVDELQELVKY-LKNPDLFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVP 490
Query: 223 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDS-- 280
F +++GSE V+ +G GS +R+LF A+ + PS+IF+DEID++ + R N D
Sbjct: 491 FYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEIDALATRRQGIFKENSDQLY 550
Query: 281 -----EVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNE 335
E + T+ +LL +LDGF+ + L ATNR D+LD ALLRPGR DRKI PN
Sbjct: 551 NAATQERETTLNQLLIELDGFDTGKGVIFLGATNRRDLLDPALLRPGRFDRKIRVRPPNA 610
Query: 336 ESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQED 395
+ RLDILKIH+ ++ + +DL A + G SGA+L + EA + A+R+ + Q D
Sbjct: 611 KGRLDILKIHASKVKMSDSVDLSSYASNLPGWSGAKLAQLVQEAALVAVRKTHNSILQSD 670
Query: 396 FEMAVAKVMKKETEKNMSL 414
+ AV ++ T + L
Sbjct: 671 MDDAVDRLTVGPTRIGLEL 689
WARNING: HSPs involving 510 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.134 0.371 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 419 407 0.00078 118 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 760
No. of states in DFA: 593 (63 KB)
Total size of DFA: 213 KB (2119 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.08u 0.12s 38.20t Elapsed: 00:00:02
Total cpu time: 38.14u 0.13s 38.27t Elapsed: 00:00:02
Start: Sat May 11 16:09:11 2013 End: Sat May 11 16:09:13 2013
WARNINGS ISSUED: 2