BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014743
(419 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C5U3|PRS8A_ARATH 26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana
GN=RPT6A PE=2 SV=1
Length = 419
Score = 815 bits (2106), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/420 (94%), Positives = 412/420 (98%), Gaps = 2/420 (0%)
Query: 1 MAAVGIETKQPESAAPEEVCAAKGAS-KQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEA 59
MAAVG+++++PE+A EE C KGA+ KQGEGL+QYYLQHIHELQ Q+RQKT+NLNRLEA
Sbjct: 1 MAAVGVDSRRPETAM-EETCNVKGAAAKQGEGLKQYYLQHIHELQRQLRQKTNNLNRLEA 59
Query: 60 QRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITK 119
QRNELNSRVRML+EELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITK
Sbjct: 60 QRNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITK 119
Query: 120 ITPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIEL 179
ITPSTRVALRNDSYVLHL+LPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIEL
Sbjct: 120 ITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIEL 179
Query: 180 PIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEG 239
PIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEG
Sbjct: 180 PIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEG 239
Query: 240 SRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS 299
SRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS
Sbjct: 240 SRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS 299
Query: 300 NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKK 359
NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR DILKIHSR+MNLMRGIDLKK
Sbjct: 300 NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKK 359
Query: 360 IAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
IAEKMNGASGAELKAVCTEAGMFALRERR+HVTQEDFEMAVAKVMKK+TEKNMSLRKLWK
Sbjct: 360 IAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKDTEKNMSLRKLWK 419
>sp|Q94BQ2|PRS8B_ARATH 26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana
GN=RPT6B PE=2 SV=1
Length = 419
Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/420 (92%), Positives = 405/420 (96%), Gaps = 2/420 (0%)
Query: 1 MAAVGIETKQPESAAPEEVCAAKGAS-KQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEA 59
MAAVG+E + P +A EE C KGA+ KQGEGL +YYLQH+ ELQ R+K++NLNRLEA
Sbjct: 1 MAAVGVEARPPVTAM-EETCNVKGAAAKQGEGLNKYYLQHLDELQRLQREKSYNLNRLEA 59
Query: 60 QRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITK 119
QRNELNSRVRML+EELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITK
Sbjct: 60 QRNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITK 119
Query: 120 ITPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIEL 179
+TPSTRVALRNDSYVLHL+LPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIEL
Sbjct: 120 LTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIEL 179
Query: 180 PIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEG 239
PIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEG
Sbjct: 180 PIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEG 239
Query: 240 SRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS 299
SRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS
Sbjct: 240 SRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEAS 299
Query: 300 NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKK 359
NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESR DILKIHSR+MNLMRGIDLKK
Sbjct: 300 NKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKK 359
Query: 360 IAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
IAEKMNGASGAELKAVCTEAGMFALRERR+HVTQEDFEMAVAKVMKK+TEKNMSLRKLWK
Sbjct: 360 IAEKMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKDTEKNMSLRKLWK 419
>sp|O18413|PRS8_DROME 26S protease regulatory subunit 8 OS=Drosophila melanogaster
GN=Pros45 PE=1 SV=2
Length = 405
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/397 (82%), Positives = 366/397 (92%), Gaps = 1/397 (0%)
Query: 23 KGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPG 82
+ A +GEG R YY+Q I ELQL V +K NL RL+AQRNELN++VRML+EELQLLQE G
Sbjct: 10 ESAYHKGEGFRSYYIQKIEELQLVVAEKHQNLRRLQAQRNELNAKVRMLREELQLLQEQG 69
Query: 83 SYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSK 142
SYVGEVVK M K KVLVKVHPEGK+VVD+DK+IDI +TP+ RVALRN+SY LH ILP+K
Sbjct: 70 SYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNK 129
Query: 143 VDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYG 202
VDPLV+LM VEKVPDSTY+M+GGLD+QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYG
Sbjct: 130 VDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYG 189
Query: 203 PPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDE 262
PPGTGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAREHAPSIIFMDE
Sbjct: 190 PPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDE 249
Query: 263 IDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPG 322
IDSIGS+R+ESGSG GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRIDILD ALLRPG
Sbjct: 250 IDSIGSSRIESGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPG 308
Query: 323 RIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMF 382
RIDRKIEFP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+
Sbjct: 309 RIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMY 368
Query: 383 ALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
ALRERR+HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct: 369 ALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 405
>sp|P54814|PRS8_MANSE 26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1
Length = 402
Score = 671 bits (1731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/394 (81%), Positives = 364/394 (92%), Gaps = 1/394 (0%)
Query: 26 SKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYV 85
S +GEG R YY+ I ELQL V +K+ NL RL+AQRNELN++VRML+EELQLLQE GSYV
Sbjct: 10 STKGEGFRPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYV 69
Query: 86 GEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVDP 145
GEVVK M K KVLVKVHPEGK+VVD+DK++DI +T + RVALRN+SY LH ILP+KVDP
Sbjct: 70 GEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDP 129
Query: 146 LVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPG 205
LV+LM VEKVPDSTY+M+GGLD+QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPG
Sbjct: 130 LVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPG 189
Query: 206 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDS 265
TGKTLLARAVAHHT+CTFIRVSGSELVQK+IGEGSRMVRELFVMAREHAPSIIFMDEIDS
Sbjct: 190 TGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDS 249
Query: 266 IGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRID 325
IGS+R+ESGSG GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRIDILD ALLRPGRID
Sbjct: 250 IGSSRIESGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRID 308
Query: 326 RKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALR 385
RKIEFP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+ALR
Sbjct: 309 RKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 368
Query: 386 ERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
ERR+HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct: 369 ERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 402
>sp|P62198|PRS8_RAT 26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5
PE=1 SV=1
Length = 406
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/405 (81%), Positives = 369/405 (91%), Gaps = 3/405 (0%)
Query: 15 APEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEE 74
PE++ +G K G GLRQYYL I ELQL V K+ NL RL+AQRNELN++VR+L+EE
Sbjct: 5 GPEQMELEEG--KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREE 62
Query: 75 LQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYV 134
LQLLQE GSYVGEVV+ M K KVLVKVHPEGK+VVD+DK+IDI +TP+ RVALRNDSY
Sbjct: 63 LQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYT 122
Query: 135 LHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQ 194
LH ILP+KVDPLV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHPELFE+LGIAQ
Sbjct: 123 LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQ 182
Query: 195 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHA 254
PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK+IGEG+RMVRELFVMAREHA
Sbjct: 183 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHA 242
Query: 255 PSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDIL 314
PSIIFMDEIDSIGS+R+E GSG GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRIDIL
Sbjct: 243 PSIIFMDEIDSIGSSRLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 301
Query: 315 DQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKA 374
D ALLRPGRIDRKIEFP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K
Sbjct: 302 DSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKG 361
Query: 375 VCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
VCTEAGM+ALRERR+HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct: 362 VCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 406
>sp|P62197|PRS8_PIG 26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1
Length = 406
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/405 (81%), Positives = 369/405 (91%), Gaps = 3/405 (0%)
Query: 15 APEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEE 74
PE++ +G K G GLRQYYL I ELQL V K+ NL RL+AQRNELN++VR+L+EE
Sbjct: 5 GPEQMELEEG--KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREE 62
Query: 75 LQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYV 134
LQLLQE GSYVGEVV+ M K KVLVKVHPEGK+VVD+DK+IDI +TP+ RVALRNDSY
Sbjct: 63 LQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYT 122
Query: 135 LHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQ 194
LH ILP+KVDPLV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHPELFE+LGIAQ
Sbjct: 123 LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQ 182
Query: 195 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHA 254
PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK+IGEG+RMVRELFVMAREHA
Sbjct: 183 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHA 242
Query: 255 PSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDIL 314
PSIIFMDEIDSIGS+R+E GSG GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRIDIL
Sbjct: 243 PSIIFMDEIDSIGSSRLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 301
Query: 315 DQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKA 374
D ALLRPGRIDRKIEFP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K
Sbjct: 302 DSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKG 361
Query: 375 VCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
VCTEAGM+ALRERR+HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct: 362 VCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 406
>sp|P62196|PRS8_MOUSE 26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1
SV=1
Length = 406
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/405 (81%), Positives = 369/405 (91%), Gaps = 3/405 (0%)
Query: 15 APEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEE 74
PE++ +G K G GLRQYYL I ELQL V K+ NL RL+AQRNELN++VR+L+EE
Sbjct: 5 GPEQMELEEG--KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREE 62
Query: 75 LQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYV 134
LQLLQE GSYVGEVV+ M K KVLVKVHPEGK+VVD+DK+IDI +TP+ RVALRNDSY
Sbjct: 63 LQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYT 122
Query: 135 LHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQ 194
LH ILP+KVDPLV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHPELFE+LGIAQ
Sbjct: 123 LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQ 182
Query: 195 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHA 254
PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK+IGEG+RMVRELFVMAREHA
Sbjct: 183 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHA 242
Query: 255 PSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDIL 314
PSIIFMDEIDSIGS+R+E GSG GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRIDIL
Sbjct: 243 PSIIFMDEIDSIGSSRLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 301
Query: 315 DQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKA 374
D ALLRPGRIDRKIEFP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K
Sbjct: 302 DSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKG 361
Query: 375 VCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
VCTEAGM+ALRERR+HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct: 362 VCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 406
>sp|P62195|PRS8_HUMAN 26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1
SV=1
Length = 406
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/405 (81%), Positives = 369/405 (91%), Gaps = 3/405 (0%)
Query: 15 APEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEE 74
PE++ +G K G GLRQYYL I ELQL V K+ NL RL+AQRNELN++VR+L+EE
Sbjct: 5 GPEQMELEEG--KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREE 62
Query: 75 LQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYV 134
LQLLQE GSYVGEVV+ M K KVLVKVHPEGK+VVD+DK+IDI +TP+ RVALRNDSY
Sbjct: 63 LQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYT 122
Query: 135 LHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQ 194
LH ILP+KVDPLV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHPELFE+LGIAQ
Sbjct: 123 LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQ 182
Query: 195 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHA 254
PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK+IGEG+RMVRELFVMAREHA
Sbjct: 183 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHA 242
Query: 255 PSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDIL 314
PSIIFMDEIDSIGS+R+E GSG GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRIDIL
Sbjct: 243 PSIIFMDEIDSIGSSRLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 301
Query: 315 DQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKA 374
D ALLRPGRIDRKIEFP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K
Sbjct: 302 DSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKG 361
Query: 375 VCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
VCTEAGM+ALRERR+HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct: 362 VCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 406
>sp|P62194|PRS8_BOVIN 26S protease regulatory subunit 8 OS=Bos taurus GN=PSMC5 PE=2 SV=1
Length = 406
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/405 (81%), Positives = 369/405 (91%), Gaps = 3/405 (0%)
Query: 15 APEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEE 74
PE++ +G K G GLRQYYL I ELQL V K+ NL RL+AQRNELN++VR+L+EE
Sbjct: 5 GPEQMELEEG--KAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREE 62
Query: 75 LQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYV 134
LQLLQE GSYVGEVV+ M K KVLVKVHPEGK+VVD+DK+IDI +TP+ RVALRNDSY
Sbjct: 63 LQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYT 122
Query: 135 LHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQ 194
LH ILP+KVDPLV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHPELFE+LGIAQ
Sbjct: 123 LHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQ 182
Query: 195 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHA 254
PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK+IGEG+RMVRELFVMAREHA
Sbjct: 183 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHA 242
Query: 255 PSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDIL 314
PSIIFMDEIDSIGS+R+E GSG GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRIDIL
Sbjct: 243 PSIIFMDEIDSIGSSRLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDIL 301
Query: 315 DQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKA 374
D ALLRPGRIDRKIEFP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K
Sbjct: 302 DSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKG 361
Query: 375 VCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
VCTEAGM+ALRERR+HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct: 362 VCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 406
>sp|P34124|PRS8_DICDI 26S protease regulatory subunit 8 OS=Dictyostelium discoideum
GN=psmC5 PE=1 SV=2
Length = 403
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/392 (81%), Positives = 363/392 (92%)
Query: 28 QGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGE 87
+ +G++ YY I EL+++V +K +L RLEAQRNELN+RVRMLKEELQLL PGS+V E
Sbjct: 12 ETKGIKSYYCSKIEELEIKVNEKAQDLRRLEAQRNELNNRVRMLKEELQLLTNPGSHVAE 71
Query: 88 VVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVDPLV 147
VVK+MGKNKVLVKV+PEGK+VVDID ++DI K+TPSTR AL+++SY LH ILP+K+DPLV
Sbjct: 72 VVKLMGKNKVLVKVNPEGKFVVDIDPTVDIAKLTPSTRAALKHESYTLHRILPNKIDPLV 131
Query: 148 NLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTG 207
+LMKVEK+PDSTYDM+GGLD+QIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTG
Sbjct: 132 SLMKVEKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTG 191
Query: 208 KTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIG 267
KTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELF+MAREHAPSIIFMDEIDSIG
Sbjct: 192 KTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIG 251
Query: 268 SARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRK 327
S+R ESGSG GDSEVQRTMLELLNQLDGFE++ IKVLM TNRIDILD ALLRPGRIDRK
Sbjct: 252 SSRGESGSGGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRK 311
Query: 328 IEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRER 387
IEFPNP + RLDILKIHSR+MNL RGI+LKKI++KMNGASGAELKAVCTEAGM+ALRER
Sbjct: 312 IEFPNPGDAGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRER 371
Query: 388 RIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
R+HV+QEDFEMAV+KVMKK++E+NMS+ KLWK
Sbjct: 372 RVHVSQEDFEMAVSKVMKKDSEQNMSINKLWK 403
>sp|P46470|PRS8_XENLA 26S protease regulatory subunit 8 OS=Xenopus laevis GN=psmc5 PE=2
SV=2
Length = 461
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/394 (82%), Positives = 362/394 (91%), Gaps = 2/394 (0%)
Query: 26 SKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYV 85
S+ G GLRQYYL I +LQL V K+ NL RL+AQRNELN++VR+L+EELQLLQE GSYV
Sbjct: 9 SRGGTGLRQYYLSKIEDLQLVVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYV 68
Query: 86 GEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVDP 145
GEVV+ M K KVLVKVHPEGK+VVD+DK+IDI +TP+ RVALRNDSY LH ILP+KVDP
Sbjct: 69 GEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDP 128
Query: 146 LVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPG 205
LV+LM VEKVPDSTY+MIGGLD+QIKEIKEVIELP+KHPE FE+LGIAQPKGVLLYGPPG
Sbjct: 129 LVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPG 188
Query: 206 TGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDS 265
TGKTLLARAVAHHTDCTFIRVSGSELVQK+IGEG+RMVRELFVMAREHAPSIIFMDEIDS
Sbjct: 189 TGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDS 248
Query: 266 IGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRID 325
IGS R+E GSG GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRIDILD ALLRPGRID
Sbjct: 249 IGS-RLEGGSG-GDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRID 306
Query: 326 RKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALR 385
RKIEFP PNEE+RLDILKIHSR+MNL RGI+L+KIAE M GASGAE+K VCTEAGM+ALR
Sbjct: 307 RKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALR 366
Query: 386 ERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
ERR+HVTQEDFEMAVAKVM+K++EKNMS++KLWK
Sbjct: 367 ERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 400
>sp|Q25544|PRS8_NAEFO 26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2
SV=1
Length = 414
Score = 634 bits (1635), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/389 (80%), Positives = 348/389 (89%)
Query: 31 GLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVK 90
GL+ YY+ I E ++ +R K NL RL+AQRNELN RVR LKEELQ LQEPGS+VGEVVK
Sbjct: 26 GLKNYYIAKIQEKEIVLRDKIENLRRLQAQRNELNGRVRSLKEELQQLQEPGSHVGEVVK 85
Query: 91 VMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVDPLVNLM 150
VMGK KVL+K+ EGKY+VDIDKSI++ +TP RVALRNDSY LH ILP+K+DPLV+LM
Sbjct: 86 VMGKKKVLIKISQEGKYIVDIDKSIELKDLTPGVRVALRNDSYALHKILPNKIDPLVSLM 145
Query: 151 KVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTL 210
KVEKVPD+TY+M+GGLD+QIKEIKEVIELPIKHPELFESLGIAQPKGV++YGPPGTGKTL
Sbjct: 146 KVEKVPDATYEMVGGLDEQIKEIKEVIELPIKHPELFESLGIAQPKGVIMYGPPGTGKTL 205
Query: 211 LARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSAR 270
LARAVAHHTDCTFIRVSGSELVQKYIGEGS+MVRELFVMAREHAPSIIFMDEIDSIGS R
Sbjct: 206 LARAVAHHTDCTFIRVSGSELVQKYIGEGSKMVRELFVMAREHAPSIIFMDEIDSIGSTR 265
Query: 271 MESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEF 330
E G G GDSEVQRTMLELLNQLDGFE++ IK++MATNRIDILD ALLRPGRIDRKIEF
Sbjct: 266 TEGGKGGGDSEVQRTMLELLNQLDGFESTQNIKIIMATNRIDILDPALLRPGRIDRKIEF 325
Query: 331 PNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIH 390
PNPNE +RLDILKIHSRRMNL RGI+L+KIA + GASGAE+KA CTEAGMFALRERR+H
Sbjct: 326 PNPNELARLDILKIHSRRMNLTRGINLRKIASMLGGASGAEIKATCTEAGMFALRERRVH 385
Query: 391 VTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
VTQED EMAVAKVMK+ E NMS +KL+K
Sbjct: 386 VTQEDLEMAVAKVMKRGDESNMSFKKLFK 414
>sp|P41836|PRS8_SCHPO 26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=let1 PE=3 SV=1
Length = 403
Score = 617 bits (1590), Expect = e-176, Method: Compositional matrix adjust.
Identities = 313/393 (79%), Positives = 348/393 (88%)
Query: 27 KQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVG 86
+ E + QYY Q I + +L + QKT NL RLEAQRN LN+RVR+L+EE+QLLQEPGSYVG
Sbjct: 11 QSNENIVQYYTQKIQDAELAILQKTQNLRRLEAQRNGLNARVRLLREEIQLLQEPGSYVG 70
Query: 87 EVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVDPL 146
EV+K MGKNKVLVKVHPEGKYVVDI IDI +I P+ RVALRNDSY L ILP+KVDPL
Sbjct: 71 EVIKTMGKNKVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVDPL 130
Query: 147 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 206
V+LM VEK+PDSTY+M+GGL++QIKEIKEVIELP+KHPELFESLGI QPKG+LLYGPPGT
Sbjct: 131 VSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGT 190
Query: 207 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI 266
GKTLLARAVAHHTDC FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI
Sbjct: 191 GKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI 250
Query: 267 GSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDR 326
GS+R +S G+GDSEVQRTMLELLNQLDGFEA+ IKV+MATNRIDILD ALLRPGRIDR
Sbjct: 251 GSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDR 310
Query: 327 KIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
KIEFP P+ E+R +IL+IHSR MNL RGIDLK IAEKMNGASGAELK VCTEAGMFALRE
Sbjct: 311 KIEFPPPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRE 370
Query: 387 RRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
RR+HVTQEDFE+AVAKV+ K MSL+KL+K
Sbjct: 371 RRVHVTQEDFELAVAKVLNKGDSGEMSLQKLFK 403
>sp|Q01939|PRS8_YEAST 26S protease regulatory subunit 8 homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RPT6 PE=1
SV=4
Length = 405
Score = 613 bits (1581), Expect = e-175, Method: Compositional matrix adjust.
Identities = 291/389 (74%), Positives = 339/389 (87%), Gaps = 1/389 (0%)
Query: 31 GLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVK 90
G++ Y+ Q I E +L++R KT N+ RLEAQRN LN +VR +K+EL+LLQEPGSYVGEV+K
Sbjct: 18 GIKPYFEQKIQETELKIRSKTENVRRLEAQRNALNDKVRFIKDELRLLQEPGSYVGEVIK 77
Query: 91 VMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVDPLVNLM 150
++ KVLVKV PEGKY+VD+ K I++ + S RV LR+DSY+LH +L +K DPLV+LM
Sbjct: 78 IVSDKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLM 137
Query: 151 KVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTL 210
VEKVPDSTYDM+GGL +QIKEIKEVIELP+KHPELFESLGIAQPKGV+LYGPPGTGKTL
Sbjct: 138 MVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTL 197
Query: 211 LARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSAR 270
LARAVAHHTDC FIRVSG+ELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS R
Sbjct: 198 LARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTR 257
Query: 271 MESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEF 330
+E GSG GDSEVQRTMLELLNQLDGFE S IK++MATNR+DILD ALLRPGRIDRKIEF
Sbjct: 258 VE-GSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEF 316
Query: 331 PNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIH 390
P P+ +R +IL+IHSR+MNL RGI+L+K+AEKMNG SGA++K VCTEAGM+ALRERRIH
Sbjct: 317 PPPSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERRIH 376
Query: 391 VTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
VTQEDFE+AV KVM K E +S+ KL+K
Sbjct: 377 VTQEDFELAVGKVMNKNQETAISVAKLFK 405
>sp|Q8SQK0|PRS8_ENCCU 26S protease regulatory subunit 8 homolog OS=Encephalitozoon
cuniculi (strain GB-M1) GN=RPT6 PE=1 SV=1
Length = 453
Score = 572 bits (1475), Expect = e-162, Method: Compositional matrix adjust.
Identities = 283/395 (71%), Positives = 330/395 (83%), Gaps = 2/395 (0%)
Query: 26 SKQGEGL-RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSY 84
+ EG + +Y + L++Q+ +KT L LE +R ELN RVR L+EE+ ++QEP S
Sbjct: 60 CRMAEGFCKNFYSNKLDHLEVQIAKKTKILRVLEQKRAELNRRVRFLREEISIVQEPSSN 119
Query: 85 VGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVD 144
VG VV+ MGK +VLVK +P+GKY+V ++ ++ ++ RVALR+DSY +H ILP+KVD
Sbjct: 120 VGVVVEKMGKMQVLVKTNPDGKYLVKVEPGVNYDELKAGVRVALRSDSYDVHRILPTKVD 179
Query: 145 PLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPP 204
PLV+LM VEKVPDSTY MIGGLD+QIKEI+EVIELPIKHPELFE+LGIAQPKGVLLYGPP
Sbjct: 180 PLVSLMMVEKVPDSTYQMIGGLDEQIKEIREVIELPIKHPELFENLGIAQPKGVLLYGPP 239
Query: 205 GTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 264
GTGKTLLARAVAHHT C FIRVSGSELVQKYIGEGSR+VRELF+MAREHAPSIIFMDEID
Sbjct: 240 GTGKTLLARAVAHHTQCKFIRVSGSELVQKYIGEGSRLVRELFIMAREHAPSIIFMDEID 299
Query: 265 SIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRI 324
SIGS R +S G+ DSEVQRTMLELLNQLDGFE+ N IKV+MATNRIDILD ALLR GRI
Sbjct: 300 SIGSTRGDSNKGS-DSEVQRTMLELLNQLDGFESHNNIKVIMATNRIDILDPALLRTGRI 358
Query: 325 DRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFAL 384
DRKIEFP PNE +RL+ILKIHSR+MNL +GIDL+ IA KM G SGAE+KAVCTEAGM+AL
Sbjct: 359 DRKIEFPPPNESARLEILKIHSRKMNLTKGIDLETIASKMVGCSGAEVKAVCTEAGMYAL 418
Query: 385 RERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLWK 419
RERR+HVTQEDFEMAV KV+KK + N LRKL K
Sbjct: 419 RERRVHVTQEDFEMAVHKVLKKTGDLNSDLRKLLK 453
>sp|O57940|PAN_PYRHO Proteasome-activating nucleotidase OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=pan PE=3 SV=1
Length = 399
Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/372 (52%), Positives = 270/372 (72%), Gaps = 2/372 (0%)
Query: 36 YLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKN 95
Y +I L+ ++RQ + LEA + L + L+ E+ L++P ++ G V++V+ ++
Sbjct: 15 YDDYITYLKRRIRQLELQVRMLEADKERLERELSRLRSEMSRLRQPPAFAGTVIEVLDED 74
Query: 96 KVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKV 155
+ +V+ + ++VV I ID K+ P TRVAL + + ILP+ DP V +V +
Sbjct: 75 RAIVQNYNGPRFVVRIAPWIDRKKLRPGTRVALDQRTMAVVEILPTSKDPTVLGFEVIER 134
Query: 156 PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAV 215
P+ TY+ IGGL +Q++E++E IELP+KHPELFE +GI PKGVLLYGPPG GKTL+A+A+
Sbjct: 135 PNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAL 194
Query: 216 AHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGS 275
AH + TFIRV GSELV+KYIGEG+R+V ELF +A+E AP+IIF+DEID+IG+ RM+ +
Sbjct: 195 AHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETT 254
Query: 276 GNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNE 335
G G+ EV RT+++LL ++DGF+ +KV+ ATNR DILD ALLRPGR DR IE P P+
Sbjct: 255 G-GEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDF 313
Query: 336 ESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQED 395
E RL+ILK+H+RRM L +G+DL+ IAE GASGA+LKA+ TEAGMFA+RERR +VTQED
Sbjct: 314 EGRLEILKVHTRRMKL-KGVDLRAIAEMTEGASGADLKAIATEAGMFAIRERRTYVTQED 372
Query: 396 FEMAVAKVMKKE 407
F AV KV+ E
Sbjct: 373 FLKAVDKVLGNE 384
>sp|Q8U4H3|PAN_PYRFU Proteasome-activating nucleotidase OS=Pyrococcus furiosus (strain
ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=pan PE=3 SV=1
Length = 396
Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/373 (52%), Positives = 270/373 (72%), Gaps = 9/373 (2%)
Query: 35 YYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGK 94
Y + I +L+LQVR LEA + L + L+ E+ L++P ++ G V++V+
Sbjct: 18 YLKRRIRQLELQVRM-------LEADKERLERELSRLRSEMSRLRQPPAFAGSVIEVLDD 70
Query: 95 NKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEK 154
++ +V+ + ++VV I ID +K+ P TRVAL + + ILP+ DP V +V +
Sbjct: 71 DRAIVQNYNGPRFVVRIAPWIDKSKLRPGTRVALDQRTMAIIEILPASKDPAVLGFEVVE 130
Query: 155 VPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 214
P+ TY+ IGGL +Q++E++E IELP+KHPELFE +GI PKGVLLYGPPG GKTL+A+A
Sbjct: 131 RPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKA 190
Query: 215 VAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESG 274
+AH + TFIRV GSELV+KYIGEG+R+V ELF +A+E AP+IIF+DEID+IG+ R++
Sbjct: 191 IAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRLDET 250
Query: 275 SGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPN 334
+G G+ EV RT+++LL ++DGF+ +KV+ ATNR DILD ALLRPGR DR IE P P+
Sbjct: 251 TG-GEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPD 309
Query: 335 EESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQE 394
E RL+ILK+H+RRM L RG+DL+ IAE GASGA+LKA+ TEAGMFA+RERR +VTQE
Sbjct: 310 FEGRLEILKVHTRRMKL-RGVDLRLIAELTEGASGADLKAIATEAGMFAIRERRTYVTQE 368
Query: 395 DFEMAVAKVMKKE 407
DF A+ KV+ E
Sbjct: 369 DFLKAIDKVLGNE 381
>sp|Q8TX03|PAN_METKA Proteasome-activating nucleotidase OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=pan PE=3
SV=1
Length = 436
Score = 381 bits (979), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/402 (49%), Positives = 279/402 (69%), Gaps = 11/402 (2%)
Query: 27 KQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNE---LNSRVRM-------LKEELQ 76
K+ E L + H +L+++ R++ LE +R+E L +R L+ +LQ
Sbjct: 35 KRLEELERKLRAHEEKLRIEARRRKTLEKELEMERDEKAELREELRRKEVMIEKLRSDLQ 94
Query: 77 LLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLH 136
+++P VG V +++ +V+VK K+V ++ ++D ++ P VAL S +
Sbjct: 95 RMKKPPLIVGTVEEILDDGRVIVKSSTGPKFVSNVSPTVDRNELEPGANVALNQQSMAVV 154
Query: 137 LILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPK 196
+LPS+ D V M+V++ PD +YD IGGLD+QI+EI+EV+E P+K PELFE +G+ PK
Sbjct: 155 DVLPSEKDSRVLAMEVDESPDVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEPPK 214
Query: 197 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPS 256
GVLLYGPPGTGKTLLA+AVA+H D TFIR++ ELVQK+IGEG+R+VRELF +ARE APS
Sbjct: 215 GVLLYGPPGTGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPS 274
Query: 257 IIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQ 316
IIF+DEID+IG+ RM + +GD EVQRT+ +LL ++DGF+ + IKV+ ATNR DILD
Sbjct: 275 IIFIDEIDAIGARRMRDAT-SGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDP 333
Query: 317 ALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVC 376
ALLRPGR DR I+ P P+EE R +I KIH+R MNL +DL+K+A+ GASGA++KA+C
Sbjct: 334 ALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAIC 393
Query: 377 TEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKLW 418
TEAGM A+RE R VT +DF AV +VM K+ E++ ++ +
Sbjct: 394 TEAGMMAIREDRDIVTMDDFLKAVDRVMGKKEEESGEFKRAY 435
>sp|Q9V287|PAN_PYRAB Proteasome-activating nucleotidase OS=Pyrococcus abyssi (strain GE5
/ Orsay) GN=pan PE=3 SV=2
Length = 396
Score = 377 bits (969), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/372 (51%), Positives = 267/372 (71%), Gaps = 2/372 (0%)
Query: 36 YLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKN 95
Y +I L+ ++RQ + LEA + L + L+ E+ L++P ++ G V++V+ +
Sbjct: 12 YDDYITYLKRRIRQLELQVRMLEADKERLERELSRLRSEMSRLRQPPAFAGTVIEVLDDD 71
Query: 96 KVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKV 155
+ +V+ + ++VV I I+ K+ P RVAL + + +LPS DP V +V +
Sbjct: 72 RAIVQNYNGPRFVVRIAPWIERDKLRPGARVALDQRTMAIIELLPSSKDPTVLGFEVIER 131
Query: 156 PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAV 215
P+ TY+ IGGL +Q++E++E IELP+KHPELFE +GI PKGVLLYGPPG GKTL+A+A+
Sbjct: 132 PNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAL 191
Query: 216 AHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGS 275
AH + TFIRV GSELV+KYIGEG+R+V ELF +A+E AP+IIF+DEID+IG+ RM+ +
Sbjct: 192 AHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETT 251
Query: 276 GNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNE 335
G G+ EV RT+++LL ++DGF+ +KV+ ATNR DILD ALLRPGR DR IE P P+
Sbjct: 252 G-GEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDF 310
Query: 336 ESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQED 395
E RL+ILK+H+RRM L + +DL+ IAE GASGA+LKA+ TEAGMFA+RERR +VTQED
Sbjct: 311 EGRLEILKVHTRRMKL-KNVDLRVIAEITEGASGADLKAIATEAGMFAIRERRTYVTQED 369
Query: 396 FEMAVAKVMKKE 407
F AV KV+ E
Sbjct: 370 FLKAVDKVLGNE 381
>sp|Q5JHS5|PAN_PYRKO Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis
(strain ATCC BAA-918 / JCM 12380 / KOD1) GN=pan PE=3
SV=1
Length = 397
Score = 376 bits (965), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/372 (50%), Positives = 270/372 (72%), Gaps = 2/372 (0%)
Query: 36 YLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKN 95
Y ++ L+ ++RQ + LEA + L + L+ E+ L++P ++ G V++V+
Sbjct: 13 YDDYVTFLKRRIRQLELQVRTLEADKERLERELSRLRMEMSRLRQPPAFAGNVIEVLDDE 72
Query: 96 KVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKV 155
+ +V+ + ++VV I I+ K+ P RVAL + + +LPS+ DP V +V +
Sbjct: 73 RAIVQNYNGPRFVVRIAPWIERDKLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIER 132
Query: 156 PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAV 215
P TY+ IGGL++Q++E++E IELP+KHPELFE +GI PKGVLLYGPPG GKTL+A+AV
Sbjct: 133 PKVTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVLLYGPPGCGKTLMAKAV 192
Query: 216 AHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGS 275
A+H + TFIRV GSELV+K+IGEG+R+V ELF +A+E AP+IIF+DEID+IG+ RM+ +
Sbjct: 193 ANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETT 252
Query: 276 GNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNE 335
G G+ EV RT+++LL ++DGF+ +KV+ ATNR DILD ALLRPGR DR IE P P+
Sbjct: 253 G-GEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDY 311
Query: 336 ESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQED 395
+ RL+ILK+H+R+MNL +G+DL+ IAE GASGA+LKA+ TEAGMFA+R+RR +VTQ+D
Sbjct: 312 QGRLEILKVHTRKMNL-KGVDLRVIAEITEGASGADLKAIATEAGMFAIRDRRTYVTQDD 370
Query: 396 FEMAVAKVMKKE 407
F AV KV+ E
Sbjct: 371 FLKAVDKVIGSE 382
>sp|B6YXR2|PAN_THEON Proteasome-activating nucleotidase OS=Thermococcus onnurineus
(strain NA1) GN=pan PE=3 SV=1
Length = 398
Score = 375 bits (963), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/373 (50%), Positives = 271/373 (72%), Gaps = 9/373 (2%)
Query: 35 YYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGK 94
Y + I +L+LQVR LEA + L + L+ E+ L++P ++ G +++++ +
Sbjct: 20 YLKKRIRQLELQVRT-------LEADKERLERELSRLRMEMSRLRQPPAFAGTLIELLDE 72
Query: 95 NKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEK 154
++ +V+ + ++VV I I+ + P RVAL + + +LPS+ DP V +V +
Sbjct: 73 DRAIVQNYNGPRFVVRIAPWIERENLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIE 132
Query: 155 VPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 214
P +Y+ IGGLD+Q++E++E IELP+KHPELFE +GI PKGVLLYGPPG GKTL+A+A
Sbjct: 133 RPTVSYNDIGGLDKQLQELREAIELPLKHPELFEKVGIEPPKGVLLYGPPGCGKTLMAKA 192
Query: 215 VAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESG 274
+AH + TFIRV GSELV+K+IGEG+R+V ELF +A+E AP+IIF+DEID+IG+ RM+
Sbjct: 193 LAHEVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPAIIFIDEIDAIGAKRMDET 252
Query: 275 SGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPN 334
+G G+ EV RT+++LL ++DGF+ S +K++ ATNR DILD ALLRPGR DR IE P PN
Sbjct: 253 TG-GEREVNRTLMQLLAEMDGFDPSGNVKIIAATNRPDILDPALLRPGRFDRLIEVPLPN 311
Query: 335 EESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQE 394
+SRL+ILKIH++RMNL +G+DL+ IAE GASGA+LKA+ EAGMFA+R+RR +VTQE
Sbjct: 312 FKSRLEILKIHTKRMNL-KGVDLRIIAEMTEGASGADLKAITMEAGMFAIRDRREYVTQE 370
Query: 395 DFEMAVAKVMKKE 407
DF A+ KV+ E
Sbjct: 371 DFLKAIEKVLGSE 383
>sp|C5A6P8|PAN_THEGJ Proteasome-activating nucleotidase OS=Thermococcus gammatolerans
(strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1
Length = 397
Score = 373 bits (958), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/372 (50%), Positives = 267/372 (71%), Gaps = 2/372 (0%)
Query: 36 YLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKN 95
Y +I L+ ++RQ + LEA + L + L+ E+ L++P ++ G V++V+ +
Sbjct: 13 YEDYITFLKRRIRQLELQVRTLEADKERLERELSRLRTEMSRLRQPPAFAGTVIEVLDDD 72
Query: 96 KVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKV 155
+ +V+ + ++VV I I+ K+ P +RVAL + + +LP++ DP V +V +
Sbjct: 73 RAIVQNYNGPRFVVRIAPWIERDKLKPGSRVALDQRTMAIVELLPTEKDPSVLGFEVIEK 132
Query: 156 PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAV 215
P TY IGGL++Q+ E++E +ELP+KHPELFE +GI PKGVLLYGPPG GKTL+A+AV
Sbjct: 133 PRVTYQDIGGLERQLAELREAVELPLKHPELFEKVGIEPPKGVLLYGPPGCGKTLMAKAV 192
Query: 216 AHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGS 275
A+H + TFIRV GSELV+K+IGEG+R+V ELF MA+E AP+IIF+DEID+IG+ RM+ +
Sbjct: 193 ANHVNATFIRVVGSELVRKFIGEGARLVHELFEMAKEKAPTIIFIDEIDAIGAKRMDETT 252
Query: 276 GNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNE 335
G G+ EV RT+++LL ++DGF+ +KV+ ATNR DILD ALLRPGR DR IE P P+
Sbjct: 253 G-GEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDF 311
Query: 336 ESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQED 395
RL+ILK+H+R+MNL R +DL IA+ GASGA+LKA+ TEAGMFA+R+RR +VTQED
Sbjct: 312 RGRLEILKVHTRKMNL-RNVDLSIIADITEGASGADLKAIATEAGMFAIRDRRTYVTQED 370
Query: 396 FEMAVAKVMKKE 407
F AV KV+ E
Sbjct: 371 FLKAVDKVLGAE 382
>sp|O28303|PAN_ARCFU Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=pan PE=1 SV=1
Length = 398
Score = 369 bits (946), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/352 (52%), Positives = 249/352 (70%), Gaps = 1/352 (0%)
Query: 57 LEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSID 116
+E++R VR L+ E++ L+ P VG V ++ +V+VK K+VV+ + I+
Sbjct: 37 IESERIRYEREVRRLRSEVERLRSPPLLVGVVSDILEDGRVVVKSSTGPKFVVNTSQYIN 96
Query: 117 ITKITPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEV 176
++ P RVAL + + +LP+ DP+V +VE+ P+ +Y+ IGGLD QI+EI+E
Sbjct: 97 EEELKPGARVALNQQTLAIVNVLPTSKDPMVYGFEVEEKPEVSYEDIGGLDVQIEEIREA 156
Query: 177 IELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYI 236
+ELP+ PELF +GI PKGVLLYGPPGTGKTLLA+AVA+ T TFIRV GSE VQKYI
Sbjct: 157 VELPLLKPELFAEVGIEPPKGVLLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYI 216
Query: 237 GEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGF 296
GEG+R+VRE+F +A+E APSIIF+DE+D+I + R S + +GD EVQRTM++LL +LDGF
Sbjct: 217 GEGARLVREVFQLAKEKAPSIIFIDELDAIAARRTNSDT-SGDREVQRTMMQLLAELDGF 275
Query: 297 EASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGID 356
+ +KV+ ATNRIDILD A+LRPGR DR IE P P E R+ I KIH+R+M L +D
Sbjct: 276 DPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVD 335
Query: 357 LKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKET 408
K++A GASGA++KA+CTEAGMFA+RE R VT DF A+ KV+KK T
Sbjct: 336 FKELARITEGASGADIKAICTEAGMFAIREERAKVTMLDFTKAIEKVLKKTT 387
>sp|O26824|PAN_METTH Proteasome-activating nucleotidase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=pan PE=3 SV=1
Length = 410
Score = 368 bits (945), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/368 (49%), Positives = 262/368 (71%), Gaps = 1/368 (0%)
Query: 43 LQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVH 102
L ++R+ + +E +R L+ V+ L+ E++ + P + V +V+ ++V VK
Sbjct: 33 LMWKIRKLEKDKLLIENERTRLDREVKSLRGEIERFRTPPLVIATVTEVLDDHRVAVKST 92
Query: 103 PEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDM 162
+V++ + ID ++ P RVAL ++ + +LPS+ DP+V M+VE+ PD +Y+
Sbjct: 93 TGPHFVINYSRFIDRKQLEPGARVALNQQTFSIVDVLPSEKDPVVTGMEVEEKPDVSYEQ 152
Query: 163 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 222
IGGL++Q++E+KE +ELP+K PELFE +GI PKGVLLYGPPGTGKTLLA+AVAH T+ T
Sbjct: 153 IGGLEEQVREVKETVELPLKKPELFEKIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNAT 212
Query: 223 FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEV 282
FI++ SE V+KYIGEG+R+VR +F +A+E +PSIIF+DEID++ + R++S S +GD EV
Sbjct: 213 FIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAKRLKS-STSGDREV 271
Query: 283 QRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDIL 342
QRT+++LL +LDGFE+ + ++ ATNR DILD ALLRPGR DR IE P PNE+ R +IL
Sbjct: 272 QRTLMQLLAELDGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNEDGRREIL 331
Query: 343 KIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAK 402
KIH+ M L +D++ +A +GASGA+LKA+CTEAGMFA+R+ R VT DF AV K
Sbjct: 332 KIHTSGMALAEEVDIELLARITDGASGADLKAICTEAGMFAIRDERDEVTMADFMDAVDK 391
Query: 403 VMKKETEK 410
+M E E+
Sbjct: 392 IMGVEKEE 399
>sp|B8GGN4|PAN_METPE Proteasome-activating nucleotidase OS=Methanosphaerula palustris
(strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3
SV=1
Length = 412
Score = 359 bits (922), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 180/383 (46%), Positives = 262/383 (68%), Gaps = 8/383 (2%)
Query: 27 KQGEGLRQYYLQHIH-------ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQ 79
++GE L +Y L+ + EL+ Q+RQ + LE Q+ VR K E++ ++
Sbjct: 12 QKGEDLYRYLLERVTNLEDRNTELREQLRQIEADKRYLETQKVRYEREVRKFKGEIEQMK 71
Query: 80 EPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLIL 139
P +G V ++ +N+V+V+ +++V I +S++I +I P R L S + IL
Sbjct: 72 SPPLVIGTVTDLIDENRVIVRSSAGPRFLVGISQSLNIEEIKPGARCTLNQQSLAIVEIL 131
Query: 140 PSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVL 199
P+ D + M+V + P Y+ IGGL++QI EI+E +ELP+K PE+F +GI PKGVL
Sbjct: 132 PTNYDAQIYGMEVIEAPSERYEEIGGLEKQINEIREAVELPLKKPEVFRKMGIEPPKGVL 191
Query: 200 LYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIF 259
L+GPPGTGKTLLARAVAH T+ F+RV GSELVQKYIGEG+R+VRELF +A++ +PSIIF
Sbjct: 192 LHGPPGTGKTLLARAVAHQTEAHFLRVVGSELVQKYIGEGARLVRELFELAKKKSPSIIF 251
Query: 260 MDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALL 319
+DEID+IG++R ES + +GD EV RT+++LL ++DGF ++++ ATNRIDILD+ALL
Sbjct: 252 IDEIDAIGASRTESNT-SGDREVHRTLMQLLAEMDGFSNRGDVRIIGATNRIDILDRALL 310
Query: 320 RPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEA 379
RPGR DR IE P P+ E R+ IL IH MN+ + +D++ IA + +G +GA+L+++C EA
Sbjct: 311 RPGRFDRIIEIPAPDIEGRVSILNIHCAGMNIDKKVDIRDIATRTDGKNGADLRSICMEA 370
Query: 380 GMFALRERRIHVTQEDFEMAVAK 402
GMFA+R VT EDFE ++ K
Sbjct: 371 GMFAIRSDHEMVTLEDFEQSIEK 393
>sp|O64982|PRS7_PRUPE 26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2
SV=1
Length = 425
Score = 357 bits (917), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 192/385 (49%), Positives = 253/385 (65%), Gaps = 22/385 (5%)
Query: 36 YLQHIHELQLQVRQKTHNLNRL-----------EAQRNELNSRVRMLKEELQLLQEPGSY 84
Y HI + + +V+ +N L + +L S +M++EE Q LQ
Sbjct: 33 YSTHIKKAEKEVKDLAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEE-QPLQ----- 86
Query: 85 VGEVVKVMGKN----KVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILP 140
V K++ N K ++ V K+VV + + T I RV + + Y + + LP
Sbjct: 87 VARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLP 146
Query: 141 SKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLL 200
K+DP V +M VE+ PD TY+ +GG +QI++++EV+ELP+ HPE F LGI PKGVL
Sbjct: 147 PKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLC 206
Query: 201 YGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM 260
YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR I+F
Sbjct: 207 YGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFF 266
Query: 261 DEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLR 320
DE+D+IG AR + G G GD+EVQRTMLE++NQLDGF+A IKVLMATNR D LD ALLR
Sbjct: 267 DEVDAIGGARFDDGVG-GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLR 325
Query: 321 PGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAG 380
PGR+DRK+EF P+ ESR I KIH+R MN R I + +A ++GA++++VCTEAG
Sbjct: 326 PGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAG 385
Query: 381 MFALRERRIHVTQEDFEMAVAKVMK 405
M+A+R RR VT++DF AV KV+K
Sbjct: 386 MYAIRARRKTVTEKDFLDAVNKVIK 410
>sp|A7I8B8|PAN_METB6 Proteasome-activating nucleotidase OS=Methanoregula boonei (strain
6A8) GN=pan PE=3 SV=1
Length = 436
Score = 357 bits (916), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 179/362 (49%), Positives = 248/362 (68%), Gaps = 1/362 (0%)
Query: 42 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKV 101
EL+ Q+RQ + +E Q+ VR LK E + L+ P +G VV V+ N+V+V+
Sbjct: 59 ELREQIRQAEADKRYIETQKIRYEREVRKLKSESEQLRSPPLIIGTVVDVVDANRVIVRS 118
Query: 102 HPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYD 161
+++V S++ I P R L S + +LPS D V M++ P Y
Sbjct: 119 SAGPRFLVRSSPSVNPDDIKPGARCTLNQQSLAIVELLPSSFDAQVYGMELVDSPQECYT 178
Query: 162 MIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDC 221
IGGL +QI E++E +ELP+K PELF +GI PKGVLLYGPPGTGKTLLA+AVAH T+
Sbjct: 179 DIGGLKEQINEVREAVELPLKRPELFTQIGIEPPKGVLLYGPPGTGKTLLAKAVAHETNA 238
Query: 222 TFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSE 281
F+RV GSELVQKYIGEG+R+VRELF +A++ AP+IIF+DEID++G++R E+ + +GD E
Sbjct: 239 HFMRVVGSELVQKYIGEGARLVRELFDLAKKKAPTIIFIDEIDAVGASRTEANT-SGDRE 297
Query: 282 VQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDI 341
VQRT+++LL +DGFE +K++ ATNRIDILD+ALLRPGR DR IE P P+EE RL I
Sbjct: 298 VQRTLMQLLAGMDGFETRGDVKIIGATNRIDILDKALLRPGRFDRIIEIPLPDEEGRLSI 357
Query: 342 LKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVA 401
LK+H+R + + ++L +IA G +GA+L+A+C EAGM+A+R R +T+EDF A+
Sbjct: 358 LKVHTRTLTMEETVNLPEIAGLTEGKNGADLRAICMEAGMYAIRNERPAITREDFLSAIE 417
Query: 402 KV 403
KV
Sbjct: 418 KV 419
>sp|Q5R8D7|PRS7_PONAB 26S protease regulatory subunit 7 OS=Pongo abelii GN=PSMC2 PE=2
SV=3
Length = 433
Score = 356 bits (914), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 176/310 (56%), Positives = 226/310 (72%), Gaps = 1/310 (0%)
Query: 96 KVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKV 155
K ++ V K+VVD+ + T I RV + + Y +H+ LP K+DP V +M+VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 156 PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAV 215
PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 216 AHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGS 275
A+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+IG AR + G+
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289
Query: 276 GNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNE 335
G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DRKIEF P+
Sbjct: 290 G-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDL 348
Query: 336 ESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQED 395
E R ILKIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R RR T++D
Sbjct: 349 EGRTHILKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKD 408
Query: 396 FEMAVAKVMK 405
F AV KV+K
Sbjct: 409 FLEAVNKVIK 418
>sp|Q9SSB5|PRS7A_ARATH 26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana
GN=RPT1A PE=2 SV=1
Length = 426
Score = 355 bits (912), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 186/347 (53%), Positives = 241/347 (69%), Gaps = 11/347 (3%)
Query: 63 ELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVDIDKSIDIT 118
+L S +M++EE Q LQ V K++ N K ++ V K+VV + + T
Sbjct: 72 DLVSDKQMMQEE-QPLQ-----VARCTKIISPNTEDAKYVINVKQIAKFVVGLGDKVSPT 125
Query: 119 KITPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIE 178
I RV + + Y + + LP K+DP V +M VE+ PD TY+ +GG +QI++++EV+E
Sbjct: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
Query: 179 LPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGE 238
LP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GE
Sbjct: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
Query: 239 GSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEA 298
G+RMVRELF MAR I+F DE+D+IG AR + G G GD+EVQRTMLE++NQLDGF+A
Sbjct: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG-GDNEVQRTMLEIVNQLDGFDA 304
Query: 299 SNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLK 358
IKVLMATNR D LD ALLRPGR+DRK+EF P+ ESR I KIH+R MN R I +
Sbjct: 305 RGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE 364
Query: 359 KIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 405
+A ++GA++++VCTEAGM+A+R RR VT++DF AV KV+K
Sbjct: 365 LLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIK 411
>sp|P46472|PRS7_XENLA 26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2
SV=1
Length = 433
Score = 355 bits (911), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 176/322 (54%), Positives = 230/322 (71%), Gaps = 1/322 (0%)
Query: 96 KVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKV 155
K ++ V K+VVD+ + T I RV + + Y +H+ LP K+DP V +M+VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 156 PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAV 215
PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 216 AHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGS 275
A+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+IG AR + G+
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289
Query: 276 GNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNE 335
G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DRKIEF P+
Sbjct: 290 G-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDL 348
Query: 336 ESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQED 395
E R I KIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R RR T++D
Sbjct: 349 EGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKD 408
Query: 396 FEMAVAKVMKKETEKNMSLRKL 417
F AV KV+K + + + R +
Sbjct: 409 FLEAVNKVIKSYAKFSATPRYM 430
>sp|P46471|PRS7_MOUSE 26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1
SV=5
Length = 433
Score = 355 bits (911), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 175/310 (56%), Positives = 225/310 (72%), Gaps = 1/310 (0%)
Query: 96 KVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKV 155
K ++ V K+VVD+ + T I RV + + Y +H+ LP K+DP V +M+VE+
Sbjct: 110 KYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEK 169
Query: 156 PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAV 215
PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGTGKTL ARAV
Sbjct: 170 PDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAV 229
Query: 216 AHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGS 275
A+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+IG AR + G+
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289
Query: 276 GNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNE 335
G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DRKIEF P+
Sbjct: 290 G-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDL 348
Query: 336 ESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQED 395
E R I KIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R RR T++D
Sbjct: 349 EGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKD 408
Query: 396 FEMAVAKVMK 405
F AV KV+K
Sbjct: 409 FLEAVNKVIK 418
>sp|Q4R4R0|PRS7_MACFA 26S protease regulatory subunit 7 OS=Macaca fascicularis GN=PSMC2
PE=2 SV=3
Length = 433
Score = 355 bits (911), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 188/379 (49%), Positives = 251/379 (66%), Gaps = 10/379 (2%)
Query: 36 YLQHIHELQLQVRQKTHNLNRL----EAQRNELNSRVRMLKEELQLLQ-EPGSYVGEVVK 90
Y + I +++ ++Q +N L E+ + L + Q LQ E V K
Sbjct: 41 YSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTK 100
Query: 91 VMGKN----KVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVDPL 146
++ + K ++ V K+VVD+ + T I RV + + Y +H+ LP K+DP
Sbjct: 101 IINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPT 160
Query: 147 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 206
V +M+VE+ PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGT
Sbjct: 161 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 220
Query: 207 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI 266
GKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+I
Sbjct: 221 GKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 280
Query: 267 GSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDR 326
G AR + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DR
Sbjct: 281 GGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 339
Query: 327 KIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
KIEF P+ E R I KIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R
Sbjct: 340 KIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRA 399
Query: 387 RRIHVTQEDFEMAVAKVMK 405
RR T++DF AV KV+K
Sbjct: 400 RRKIATEKDFLEAVNKVIK 418
>sp|P35998|PRS7_HUMAN 26S protease regulatory subunit 7 OS=Homo sapiens GN=PSMC2 PE=1
SV=3
Length = 433
Score = 355 bits (911), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 188/379 (49%), Positives = 251/379 (66%), Gaps = 10/379 (2%)
Query: 36 YLQHIHELQLQVRQKTHNLNRL----EAQRNELNSRVRMLKEELQLLQ-EPGSYVGEVVK 90
Y + I +++ ++Q +N L E+ + L + Q LQ E V K
Sbjct: 41 YSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTK 100
Query: 91 VMGKN----KVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVDPL 146
++ + K ++ V K+VVD+ + T I RV + + Y +H+ LP K+DP
Sbjct: 101 IINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPT 160
Query: 147 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 206
V +M+VE+ PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGT
Sbjct: 161 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 220
Query: 207 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI 266
GKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+I
Sbjct: 221 GKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 280
Query: 267 GSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDR 326
G AR + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DR
Sbjct: 281 GGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 339
Query: 327 KIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
KIEF P+ E R I KIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R
Sbjct: 340 KIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRA 399
Query: 387 RRIHVTQEDFEMAVAKVMK 405
RR T++DF AV KV+K
Sbjct: 400 RRKIATEKDFLEAVNKVIK 418
>sp|Q5E9F9|PRS7_BOVIN 26S protease regulatory subunit 7 OS=Bos taurus GN=PSMC2 PE=2 SV=3
Length = 433
Score = 355 bits (911), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 188/379 (49%), Positives = 251/379 (66%), Gaps = 10/379 (2%)
Query: 36 YLQHIHELQLQVRQKTHNLNRL----EAQRNELNSRVRMLKEELQLLQ-EPGSYVGEVVK 90
Y + I +++ ++Q +N L E+ + L + Q LQ E V K
Sbjct: 41 YSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTK 100
Query: 91 VMGKN----KVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVDPL 146
++ + K ++ V K+VVD+ + T I RV + + Y +H+ LP K+DP
Sbjct: 101 IINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPT 160
Query: 147 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 206
V +M+VE+ PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGT
Sbjct: 161 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 220
Query: 207 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI 266
GKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR +IF DEID+I
Sbjct: 221 GKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 280
Query: 267 GSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDR 326
G AR + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DR
Sbjct: 281 GGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 339
Query: 327 KIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
KIEF P+ E R I KIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R
Sbjct: 340 KIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRA 399
Query: 387 RRIHVTQEDFEMAVAKVMK 405
RR T++DF AV KV+K
Sbjct: 400 RRKIATEKDFLEAVNKVIK 418
>sp|A3CV35|PAN_METMJ Proteasome-activating nucleotidase OS=Methanoculleus marisnigri
(strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1
Length = 412
Score = 354 bits (909), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 181/382 (47%), Positives = 258/382 (67%), Gaps = 8/382 (2%)
Query: 29 GEGLRQYYLQHIH-------ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEP 81
GE + QY L+ I EL+ Q RQ +E Q+ +R LK E++ L+ P
Sbjct: 14 GEDIYQYLLERITNLENRNLELREQFRQMESEKRYVETQKIRYERELRKLKSEIEQLRSP 73
Query: 82 GSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPS 141
+G V V+ ++V+V+ +++V + ID + P R L S + +LP+
Sbjct: 74 PLVIGTVTDVIDNSRVIVRSSAGPRFLVRTSQLIDPDLLKPGVRCTLNQQSLAIVDVLPT 133
Query: 142 KVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLY 201
D + M++ + P+ TY+ IGGL+ QI+EI+E +ELP+ P+LFE +GI+ PKGVLLY
Sbjct: 134 SYDAQIYGMELVESPEETYENIGGLEPQIEEIREAVELPLTKPQLFEKVGISPPKGVLLY 193
Query: 202 GPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMD 261
GPPGTGKTLLARAVAH T+ F+RV GSELVQKYIGEG+R+VRELF +A++ APSIIF+D
Sbjct: 194 GPPGTGKTLLARAVAHQTNAHFLRVVGSELVQKYIGEGARLVRELFDLAKQRAPSIIFID 253
Query: 262 EIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRP 321
EID+IG+ R +S + +GD EVQRT+++LL ++DGF+ +K++ ATNRIDILD+ALLRP
Sbjct: 254 EIDAIGAHRNDS-TTSGDREVQRTLMQLLAEMDGFDNRGDVKIVAATNRIDILDRALLRP 312
Query: 322 GRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGM 381
GR DR IE P P+ + RL ILKIH++ MN+ ++L +++ G +GA+L+A+C EAGM
Sbjct: 313 GRFDRMIEIPLPDHQGRLAILKIHTQYMNIGEDVNLSEVSRLTEGKNGADLRAICMEAGM 372
Query: 382 FALRERRIHVTQEDFEMAVAKV 403
FA+R R V EDF A+ K+
Sbjct: 373 FAIRMERDAVNSEDFMKAIDKL 394
>sp|Q41365|PRS7_SPIOL 26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2
SV=1
Length = 426
Score = 354 bits (909), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 185/347 (53%), Positives = 240/347 (69%), Gaps = 11/347 (3%)
Query: 63 ELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVDIDKSIDIT 118
+L S +M++EE Q LQ V K++ N K ++ V K+VV + + T
Sbjct: 72 DLVSDKQMMQEE-QPLQ-----VARCTKIINPNTEDAKYVINVKQIAKFVVGLGDKVSPT 125
Query: 119 KITPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIE 178
I RV + + Y + + LP K+DP V +M VE+ PD TY+ +GG +QI++++EV+E
Sbjct: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
Query: 179 LPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGE 238
LP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GE
Sbjct: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
Query: 239 GSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEA 298
G+RMVRELF MAR I+F DE+D+IG AR + G G GD+EVQRTMLE++NQLDGF+A
Sbjct: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG-GDNEVQRTMLEIVNQLDGFDA 304
Query: 299 SNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLK 358
IKVLMATNR D LD ALLRPGR+DRK+EF P+ E R I KIH+R MN R I +
Sbjct: 305 RGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFE 364
Query: 359 KIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 405
+A ++GA++++VCTEAGM+A+R RR VT++DF AV KV+K
Sbjct: 365 LLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIK 411
>sp|Q9FXT9|PRS7_ORYSJ 26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica
GN=RPT1A PE=2 SV=1
Length = 426
Score = 354 bits (908), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 185/347 (53%), Positives = 240/347 (69%), Gaps = 11/347 (3%)
Query: 63 ELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKN----KVLVKVHPEGKYVVDIDKSIDIT 118
+L S +M++EE Q LQ V K++ N K ++ V K+VV + + T
Sbjct: 72 DLVSDKQMMQEE-QPLQ-----VARCTKIISPNTDDAKYVINVKQIAKFVVGLGDKVSPT 125
Query: 119 KITPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIE 178
I RV + + Y + + LP K+DP V +M VE+ PD TY+ +GG +QI++++EV+E
Sbjct: 126 DIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVE 185
Query: 179 LPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGE 238
LP+ HPE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GE
Sbjct: 186 LPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGE 245
Query: 239 GSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEA 298
G+RMVRELF MAR I+F DE+D+IG AR + G G GD+EVQRTMLE++NQLDGF+A
Sbjct: 246 GARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG-GDNEVQRTMLEIVNQLDGFDA 304
Query: 299 SNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLK 358
IKVLMATNR D LD ALLRPGR+DRK+EF P+ E R I KIH+R MN R I +
Sbjct: 305 RGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFE 364
Query: 359 KIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 405
+A ++GA++++VCTEAGM+A+R RR VT++DF AV KV+K
Sbjct: 365 LLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIK 411
>sp|Q0W257|PAN_UNCMA Proteasome-activating nucleotidase OS=Uncultured methanogenic
archaeon RC-I GN=pan PE=3 SV=1
Length = 417
Score = 353 bits (907), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 187/390 (47%), Positives = 260/390 (66%), Gaps = 11/390 (2%)
Query: 32 LRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSR-------VRMLKEELQLLQEPGSY 84
+Y L + +L+ + + ++E ++ + ++ +R L EL L+ P
Sbjct: 23 FSKYLLDRVKQLEERNVRLKEEYRKIELEKKSVENKKVQYEREIRKLTSELDRLKTPPLI 82
Query: 85 VGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVD 144
VG ++ VM K+++K K+VV+ + I+ ++ P +VAL S + +LP+ D
Sbjct: 83 VGTILDVMANGKMIIKSSTGPKFVVNSSQFINSKEVYPGAKVALNQQSLAVIEVLPTVKD 142
Query: 145 PLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPP 204
P V M+V P+ Y IGGL+ QI E+KE +ELP+ PELF+ +GI PKGVLLYGPP
Sbjct: 143 PSVLGMEVVDSPEIDYQSIGGLEAQINELKETVELPLLKPELFQKVGIEPPKGVLLYGPP 202
Query: 205 GTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 264
GTGKTLLA+AVA+ T TFIR+ GSELVQKYIGEG+RMVRELF +A+E +PSIIF+DEID
Sbjct: 203 GTGKTLLAKAVANRTKATFIRIIGSELVQKYIGEGARMVRELFELAKEKSPSIIFIDEID 262
Query: 265 SIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRI 324
SIG+ R++S + +GD EVQRT+++LL ++DGF+ +++L ATNR DILD ALLRPGR
Sbjct: 263 SIGAKRLDSIT-SGDREVQRTLVQLLAEMDGFDPRGNVRILAATNRPDILDPALLRPGRF 321
Query: 325 DRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFAL 384
DR I+ P P E+R ILKIH+R+MNL +DL+KIA + +SGA+L A+ EAGMFA+
Sbjct: 322 DRMIKVPMPTAEAREQILKIHARKMNLADDVDLRKIALITDESSGADLSAIVMEAGMFAI 381
Query: 385 RERRIHVTQEDFEMAVAKVMKKETEKNMSL 414
R R V DF AVAKVM E+N S+
Sbjct: 382 RNNRDVVDSSDFNAAVAKVM---GERNRSM 408
>sp|Q58576|PAN_METJA Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=pan PE=1 SV=1
Length = 430
Score = 353 bits (906), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 173/335 (51%), Positives = 246/335 (73%), Gaps = 1/335 (0%)
Query: 70 MLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALR 129
+L+ EL ++ P VG VV +G+ KV+VK ++V++ ++ + P RV L
Sbjct: 79 ILRRELDRMRVPPLIVGTVVDKVGERKVVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLN 138
Query: 130 NDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFES 189
+ + +LP D M+V++ P+ Y+ IGGL++Q++EI+EV+ELP+KHPELFE
Sbjct: 139 QQTLTVVDVLPENKDYRAKAMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEK 198
Query: 190 LGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVM 249
+GI PKG+LLYGPPGTGKTLLA+AVA T+ TFIRV GSELV+K+IGEG+ +V+++F +
Sbjct: 199 VGIEPPKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKL 258
Query: 250 AREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATN 309
A+E APSIIF+DEID+I + R ++ +G GD EVQRT+++LL ++DGF+A +K++ ATN
Sbjct: 259 AKEKAPSIIFIDEIDAIAAKRTDALTG-GDREVQRTLMQLLAEMDGFDARGDVKIIGATN 317
Query: 310 RIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASG 369
R DILD A+LRPGR DR IE P P+E+ RL+ILKIH+R+MNL ++L++IA+ G G
Sbjct: 318 RPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVG 377
Query: 370 AELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVM 404
AELKA+CTEAGM A+RE R +VT +DF AV K+M
Sbjct: 378 AELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIM 412
>sp|Q2FQ56|PAN_METHJ Proteasome-activating nucleotidase OS=Methanospirillum hungatei
(strain JF-1 / DSM 864) GN=pan PE=3 SV=1
Length = 412
Score = 352 bits (904), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 177/362 (48%), Positives = 244/362 (67%), Gaps = 1/362 (0%)
Query: 41 HELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVK 100
EL+ Q+RQ + +E Q+ VR LK E++ L+ P VG + ++ +V+V+
Sbjct: 33 QELKEQIRQLESDKRYIETQKIRYEREVRKLKSEIEHLKTPPLIVGTITDIIDSGRVVVR 92
Query: 101 VHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTY 160
+++V + ++++ T + R L S + +LPS D V M++ P TY
Sbjct: 93 SSAGPRFLVRVSQAVNPTTLKAGVRCTLNQQSLAIVEVLPSTYDSQVYGMELVDAPTETY 152
Query: 161 DMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 220
+ IGGL++QI EI+E +ELP+ P+LFE +GI PKGVLLYGPPGTGKTLLA+AVAH T
Sbjct: 153 EDIGGLEKQIMEIREAVELPMTRPDLFEKIGINPPKGVLLYGPPGTGKTLLAKAVAHETH 212
Query: 221 CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDS 280
F+ GSELVQKYIGEG+R+VRELF +A+E APSI+F+DEID+IG++R E+ + +GD
Sbjct: 213 AIFLHTVGSELVQKYIGEGARLVRELFDLAKEKAPSIVFIDEIDAIGASRTEAMT-SGDR 271
Query: 281 EVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLD 340
EVQRT+++LL +DGFE +K++ ATNRIDILD ALLRPGR DR IE P P+ E R
Sbjct: 272 EVQRTLMQLLAAMDGFEPRGDVKIIGATNRIDILDAALLRPGRFDRIIEIPLPDTEGRYS 331
Query: 341 ILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAV 400
ILK+H+R MNL +DL ++A G +GAEL A+C EAGMFA+R+ V QEDF A+
Sbjct: 332 ILKVHTRCMNLSEDVDLMEVARLTEGRNGAELNAICMEAGMFAIRKEHPQVDQEDFLTAL 391
Query: 401 AK 402
K
Sbjct: 392 NK 393
>sp|Q18787|PRS7_CAEEL 26S protease regulatory subunit 7 OS=Caenorhabditis elegans
GN=rpt-1 PE=1 SV=1
Length = 435
Score = 352 bits (904), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 180/343 (52%), Positives = 237/343 (69%), Gaps = 5/343 (1%)
Query: 79 QEPGSYVGEVVKVMGKNK----VLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYV 134
QE V K++ +K L+ V K+VVD+ S+ T I RV + + Y
Sbjct: 91 QEQPLQVARCTKIITSDKHDPRYLINVKQFAKFVVDLADSVAPTDIEEGMRVGVDRNKYQ 150
Query: 135 LHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQ 194
+HL LP+K+DP V +M+VE+ PD TY +GG QI++++EV+E P+ HPE + +LGI
Sbjct: 151 IHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEP 210
Query: 195 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHA 254
PKGVLLYGPPGTGKTL ARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR
Sbjct: 211 PKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKK 270
Query: 255 PSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDIL 314
+IF DEID++G AR + G G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D L
Sbjct: 271 ACLIFFDEIDAVGGARFDDGQG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTL 329
Query: 315 DQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKA 374
D AL+RPGR+DRK+EF P+ R ILKIH+++M++ R I +A ++GAE+++
Sbjct: 330 DPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRS 389
Query: 375 VCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSLRKL 417
VCTEAGMFA+R RR T++DF A+ KV+K + + + R L
Sbjct: 390 VCTEAGMFAIRARRKVATEKDFLEAINKVVKGYAKFSATPRYL 432
>sp|P48601|PRS4_DROME 26S protease regulatory subunit 4 OS=Drosophila melanogaster
GN=Pros26.4 PE=2 SV=2
Length = 439
Score = 352 bits (904), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 169/325 (52%), Positives = 235/325 (72%), Gaps = 1/325 (0%)
Query: 85 VGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVD 144
VG + +++ N +V ++ V I +D ++ P V L + + + +L D
Sbjct: 108 VGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTD 167
Query: 145 PLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPP 204
P+V +MK+EK P TY IGGLD QI+EIKE +ELP+ HPE +E +GI PKGV+LYGPP
Sbjct: 168 PMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 227
Query: 205 GTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 264
GTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A EHAPSI+F+DEID
Sbjct: 228 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 287
Query: 265 SIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRI 324
++G+ R +S SG G+ E+QRTMLELLNQLDGF++ +KV+MATNRI+ LD AL+RPGRI
Sbjct: 288 AVGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRI 346
Query: 325 DRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFAL 384
DRKIEFP P+E+++ I IH+ RM L ++L ++ + SGA++KA+CTEAG+ AL
Sbjct: 347 DRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMAL 406
Query: 385 RERRIHVTQEDFEMAVAKVMKKETE 409
RERR+ VT EDF+ + V+ ++ E
Sbjct: 407 RERRMKVTNEDFKKSKESVLYRKKE 431
>sp|P62193|PRS4_RAT 26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1
PE=2 SV=1
Length = 440
Score = 352 bits (904), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 173/325 (53%), Positives = 233/325 (71%), Gaps = 1/325 (0%)
Query: 85 VGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVD 144
VG + +++ N +V ++ V I +D + P V L + + + +L D
Sbjct: 109 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTD 168
Query: 145 PLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPP 204
PLV +MKVEK P TY IGGLD QI+EIKE +ELP+ HPE +E +GI PKGV+LYGPP
Sbjct: 169 PLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 228
Query: 205 GTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 264
GTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A EHAPSI+F+DEID
Sbjct: 229 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
Query: 265 SIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRI 324
+IG+ R +S SG G+ E+QRTMLELLNQLDGF++ +KV+MATNRI+ LD AL+RPGRI
Sbjct: 289 AIGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRI 347
Query: 325 DRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFAL 384
DRKIEFP P+E+++ I +IH+ RM L + L + + SGA++KA+CTEAG+ AL
Sbjct: 348 DRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMAL 407
Query: 385 RERRIHVTQEDFEMAVAKVMKKETE 409
RERR+ VT EDF+ + V+ K+ E
Sbjct: 408 RERRMKVTNEDFKKSKENVLYKKQE 432
>sp|P62192|PRS4_MOUSE 26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1
SV=1
Length = 440
Score = 352 bits (904), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 173/325 (53%), Positives = 233/325 (71%), Gaps = 1/325 (0%)
Query: 85 VGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVD 144
VG + +++ N +V ++ V I +D + P V L + + + +L D
Sbjct: 109 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTD 168
Query: 145 PLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPP 204
PLV +MKVEK P TY IGGLD QI+EIKE +ELP+ HPE +E +GI PKGV+LYGPP
Sbjct: 169 PLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 228
Query: 205 GTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 264
GTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A EHAPSI+F+DEID
Sbjct: 229 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
Query: 265 SIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRI 324
+IG+ R +S SG G+ E+QRTMLELLNQLDGF++ +KV+MATNRI+ LD AL+RPGRI
Sbjct: 289 AIGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRI 347
Query: 325 DRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFAL 384
DRKIEFP P+E+++ I +IH+ RM L + L + + SGA++KA+CTEAG+ AL
Sbjct: 348 DRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMAL 407
Query: 385 RERRIHVTQEDFEMAVAKVMKKETE 409
RERR+ VT EDF+ + V+ K+ E
Sbjct: 408 RERRMKVTNEDFKKSKENVLYKKQE 432
>sp|P62191|PRS4_HUMAN 26S protease regulatory subunit 4 OS=Homo sapiens GN=PSMC1 PE=1
SV=1
Length = 440
Score = 352 bits (904), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 173/325 (53%), Positives = 233/325 (71%), Gaps = 1/325 (0%)
Query: 85 VGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVD 144
VG + +++ N +V ++ V I +D + P V L + + + +L D
Sbjct: 109 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTD 168
Query: 145 PLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPP 204
PLV +MKVEK P TY IGGLD QI+EIKE +ELP+ HPE +E +GI PKGV+LYGPP
Sbjct: 169 PLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 228
Query: 205 GTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 264
GTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A EHAPSI+F+DEID
Sbjct: 229 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
Query: 265 SIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRI 324
+IG+ R +S SG G+ E+QRTMLELLNQLDGF++ +KV+MATNRI+ LD AL+RPGRI
Sbjct: 289 AIGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRI 347
Query: 325 DRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFAL 384
DRKIEFP P+E+++ I +IH+ RM L + L + + SGA++KA+CTEAG+ AL
Sbjct: 348 DRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMAL 407
Query: 385 RERRIHVTQEDFEMAVAKVMKKETE 409
RERR+ VT EDF+ + V+ K+ E
Sbjct: 408 RERRMKVTNEDFKKSKENVLYKKQE 432
>sp|Q63347|PRS7_RAT 26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2
PE=1 SV=3
Length = 433
Score = 352 bits (903), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 188/391 (48%), Positives = 255/391 (65%), Gaps = 10/391 (2%)
Query: 36 YLQHIHELQLQVRQKTHNLNRL----EAQRNELNSRVRMLKEELQLLQ-EPGSYVGEVVK 90
Y + I +++ ++Q +N L E+ + L + Q LQ E V K
Sbjct: 41 YSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTK 100
Query: 91 VMGKN----KVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVDPL 146
++ + K ++ V K+VVD+ + T I RV + + Y +H+ LP K+DP
Sbjct: 101 IINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPT 160
Query: 147 VNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGT 206
V +M+VE+ PD TY +GG +QI++++EV+E P+ HPE F +LGI PKGVLL+GPPGT
Sbjct: 161 VTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGT 220
Query: 207 GKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSI 266
GKTL ARAVA+ TD FI V GSELVQKY+GEG+RMVRELF MAR +IF DEID+I
Sbjct: 221 GKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAI 280
Query: 267 GSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDR 326
G AR + G+G GD+EVQRTMLEL+NQLDGF+ IKVLMATNR D LD AL+RPGR+DR
Sbjct: 281 GGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDR 339
Query: 327 KIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 386
KIEF P+ E R I KIH+R M++ R I + +A ++GAE+++VCTEAGMFA+R
Sbjct: 340 KIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRA 399
Query: 387 RRIHVTQEDFEMAVAKVMKKETEKNMSLRKL 417
RR T++DF AV KV+K + + + R +
Sbjct: 400 RRKIATEKDFLEAVNKVIKSYAKFSATPRYM 430
>sp|Q90732|PRS4_CHICK 26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2
SV=1
Length = 440
Score = 350 bits (899), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 171/325 (52%), Positives = 233/325 (71%), Gaps = 1/325 (0%)
Query: 85 VGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVD 144
VG + +++ N +V ++ V I +D + P V L + + + +L D
Sbjct: 109 VGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTD 168
Query: 145 PLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPP 204
PLV +MK+EK P TY IGGLD QI+EIKE +ELP+ HPE +E +GI PKGV+LYGPP
Sbjct: 169 PLVTVMKLEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPP 228
Query: 205 GTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 264
GTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A EH PSI+F+DEID
Sbjct: 229 GTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEID 288
Query: 265 SIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRI 324
+IG+ R +S SG G+ E+QRTMLELLNQLDGF++ +KV+MATNRI+ LD AL+RPGRI
Sbjct: 289 AIGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRI 347
Query: 325 DRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFAL 384
DRKIEFP P+E+++ I +IH+ RM L + L ++ + SGA++KA+CTEAG+ AL
Sbjct: 348 DRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMAL 407
Query: 385 RERRIHVTQEDFEMAVAKVMKKETE 409
RERR+ VT EDF+ + + K+TE
Sbjct: 408 RERRMKVTNEDFKKSKENFLYKKTE 432
>sp|P62335|PRS10_SPETR 26S protease regulatory subunit 10B OS=Spermophilus
tridecemlineatus GN=PSMC6 PE=2 SV=1
Length = 389
Score = 349 bits (896), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 183/371 (49%), Positives = 246/371 (66%), Gaps = 1/371 (0%)
Query: 33 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVM 92
R LQ + L+ ++ L L Q EL + + +L+ LQ G VGEV+K +
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQL 64
Query: 93 GKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVDPLVNLMKV 152
+ K +VK +YVV + +D +K+ P TRVAL + + LP +VDPLV M
Sbjct: 65 TEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSH 124
Query: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
E + +Y IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLA
Sbjct: 125 EDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 184
Query: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
RAVA DC F++V S +V KYIGE +R++RE+F AR+H P IIFMDEID+IG R
Sbjct: 185 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS 244
Query: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
G+ + D E+QRT++ELLNQ+DGF+ +++K++MATNR D LD ALLRPGR+DRKI
Sbjct: 245 EGT-SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 303
Query: 333 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVT 392
PNE++RLDILKIH+ + ID + I + +G +GA+L+ VCTEAGMFA+R V
Sbjct: 304 PNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVV 363
Query: 393 QEDFEMAVAKV 403
QEDF AV KV
Sbjct: 364 QEDFMKAVRKV 374
>sp|P62334|PRS10_MOUSE 26S protease regulatory subunit 10B OS=Mus musculus GN=Psmc6 PE=1
SV=1
Length = 389
Score = 349 bits (896), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 183/371 (49%), Positives = 246/371 (66%), Gaps = 1/371 (0%)
Query: 33 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVM 92
R LQ + L+ ++ L L Q EL + + +L+ LQ G VGEV+K +
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQL 64
Query: 93 GKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVDPLVNLMKV 152
+ K +VK +YVV + +D +K+ P TRVAL + + LP +VDPLV M
Sbjct: 65 TEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSH 124
Query: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
E + +Y IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLA
Sbjct: 125 EDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 184
Query: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
RAVA DC F++V S +V KYIGE +R++RE+F AR+H P IIFMDEID+IG R
Sbjct: 185 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS 244
Query: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
G+ + D E+QRT++ELLNQ+DGF+ +++K++MATNR D LD ALLRPGR+DRKI
Sbjct: 245 EGT-SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 303
Query: 333 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVT 392
PNE++RLDILKIH+ + ID + I + +G +GA+L+ VCTEAGMFA+R V
Sbjct: 304 PNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVV 363
Query: 393 QEDFEMAVAKV 403
QEDF AV KV
Sbjct: 364 QEDFMKAVRKV 374
>sp|P62333|PRS10_HUMAN 26S protease regulatory subunit 10B OS=Homo sapiens GN=PSMC6 PE=1
SV=1
Length = 389
Score = 349 bits (896), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 183/371 (49%), Positives = 246/371 (66%), Gaps = 1/371 (0%)
Query: 33 RQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVM 92
R LQ + L+ ++ L L Q EL + + +L+ LQ G VGEV+K +
Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQL 64
Query: 93 GKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLILPSKVDPLVNLMKV 152
+ K +VK +YVV + +D +K+ P TRVAL + + LP +VDPLV M
Sbjct: 65 TEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSH 124
Query: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
E + +Y IGGL +QI+E++EVIELP+ +PELF+ +GI PKG LLYGPPGTGKTLLA
Sbjct: 125 EDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLA 184
Query: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
RAVA DC F++V S +V KYIGE +R++RE+F AR+H P IIFMDEID+IG R
Sbjct: 185 RAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFS 244
Query: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
G+ + D E+QRT++ELLNQ+DGF+ +++K++MATNR D LD ALLRPGR+DRKI
Sbjct: 245 EGT-SADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDL 303
Query: 333 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVT 392
PNE++RLDILKIH+ + ID + I + +G +GA+L+ VCTEAGMFA+R V
Sbjct: 304 PNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVV 363
Query: 393 QEDFEMAVAKV 403
QEDF AV KV
Sbjct: 364 QEDFMKAVRKV 374
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 151,262,134
Number of Sequences: 539616
Number of extensions: 6465869
Number of successful extensions: 33718
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1869
Number of HSP's successfully gapped in prelim test: 1071
Number of HSP's that attempted gapping in prelim test: 29806
Number of HSP's gapped (non-prelim): 3808
length of query: 419
length of database: 191,569,459
effective HSP length: 120
effective length of query: 299
effective length of database: 126,815,539
effective search space: 37917846161
effective search space used: 37917846161
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)