Query 014743
Match_columns 419
No_of_seqs 423 out of 4126
Neff 7.5
Searched_HMMs 13730
Date Mon Mar 25 17:02:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014743.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/014743hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1lv7a_ c.37.1.20 (A:) AAA dom 100.0 3.8E-52 2.8E-56 396.2 26.4 251 153-405 4-254 (256)
2 d1ixza_ c.37.1.20 (A:) AAA dom 100.0 1.7E-51 1.2E-55 389.9 25.9 245 154-400 2-246 (247)
3 d1e32a2 c.37.1.20 (A:201-458) 100.0 9.5E-50 6.9E-54 380.4 22.7 240 158-401 1-257 (258)
4 d1r7ra3 c.37.1.20 (A:471-735) 100.0 1.2E-47 8.5E-52 367.2 16.6 232 155-387 1-232 (265)
5 d1w44a_ c.37.1.11 (A:) NTPase 100.0 2.1E-34 1.5E-38 279.9 -16.1 206 179-405 106-317 (321)
6 d1d2na_ c.37.1.20 (A:) Hexamer 99.9 6.4E-28 4.6E-32 227.1 12.3 196 161-368 9-206 (246)
7 d1ofha_ c.37.1.20 (A:) HslU {H 99.9 1.9E-27 1.4E-31 231.0 12.7 180 161-345 14-213 (309)
8 d1in4a2 c.37.1.20 (A:17-254) H 99.9 7.8E-24 5.7E-28 196.5 25.5 218 155-403 3-234 (238)
9 d1ixsb2 c.37.1.20 (B:4-242) Ho 99.9 1E-22 7.3E-27 189.3 23.6 219 155-403 3-235 (239)
10 d1r6bx3 c.37.1.20 (X:437-751) 99.8 4.2E-21 3E-25 186.4 15.4 194 161-378 22-274 (315)
11 d1iqpa2 c.37.1.20 (A:2-232) Re 99.8 1.6E-20 1.1E-24 173.3 18.1 208 150-398 13-228 (231)
12 d1sxjc2 c.37.1.20 (C:12-238) R 99.8 5.6E-21 4.1E-25 175.8 14.5 217 150-400 3-225 (227)
13 d1sxja2 c.37.1.20 (A:295-547) 99.8 4E-20 2.9E-24 172.3 14.4 227 150-401 3-247 (253)
14 d1fnna2 c.37.1.20 (A:1-276) CD 99.8 8.5E-19 6.2E-23 163.3 22.7 222 161-404 16-274 (276)
15 d1qvra3 c.37.1.20 (A:536-850) 99.8 3.1E-20 2.3E-24 180.1 13.0 197 161-381 23-282 (315)
16 d1njfa_ c.37.1.20 (A:) delta p 99.8 3.7E-19 2.7E-23 165.6 19.0 205 153-400 4-237 (239)
17 d1w5sa2 c.37.1.20 (A:7-293) CD 99.8 1E-18 7.5E-23 163.7 22.2 227 161-402 16-286 (287)
18 d1sxjd2 c.37.1.20 (D:26-262) R 99.8 1.5E-18 1.1E-22 159.8 19.5 216 151-400 2-235 (237)
19 d1sxjb2 c.37.1.20 (B:7-230) Re 99.8 1.6E-18 1.2E-22 159.1 17.4 207 149-400 3-222 (224)
20 d1sxje2 c.37.1.20 (E:4-255) Re 99.8 3.1E-18 2.3E-22 159.0 19.3 184 151-366 1-225 (252)
21 d1svma_ c.37.1.20 (A:) Papillo 99.8 3.7E-21 2.7E-25 189.9 -2.3 198 191-405 150-356 (362)
22 d1um8a_ c.37.1.20 (A:) ClpX {H 99.8 1.8E-18 1.3E-22 170.6 15.3 180 161-343 17-279 (364)
23 d1r6bx2 c.37.1.20 (X:169-436) 99.7 3.7E-17 2.7E-21 154.2 16.9 219 159-403 16-265 (268)
24 d1jbka_ c.37.1.20 (A:) ClpB, A 99.6 3E-16 2.2E-20 140.7 11.6 157 159-342 20-194 (195)
25 d1g8pa_ c.37.1.20 (A:) ATPase 99.6 5.5E-15 4E-19 143.3 19.5 222 156-406 2-308 (333)
26 d1l8qa2 c.37.1.20 (A:77-289) C 99.6 1.3E-13 9.1E-18 125.7 20.5 192 156-378 5-209 (213)
27 d1qvra2 c.37.1.20 (A:149-535) 99.6 3.8E-14 2.8E-18 140.2 18.1 198 159-383 20-244 (387)
28 d1a5ta2 c.37.1.20 (A:1-207) de 99.5 5.1E-14 3.7E-18 127.7 13.9 167 165-371 6-200 (207)
29 d1g41a_ c.37.1.20 (A:) HslU {H 99.5 9.3E-14 6.7E-18 139.8 17.0 77 161-237 14-92 (443)
30 d1gvnb_ c.37.1.21 (B:) Plasmid 99.4 8.6E-14 6.3E-18 129.4 4.6 69 158-235 4-72 (273)
31 d1ny5a2 c.37.1.20 (A:138-384) 99.3 1.5E-11 1.1E-15 114.1 16.2 205 163-398 2-245 (247)
32 d2gnoa2 c.37.1.20 (A:11-208) g 99.2 2.3E-11 1.7E-15 109.2 11.4 129 169-335 2-140 (198)
33 d2fnaa2 c.37.1.20 (A:1-283) Ar 99.2 7.2E-10 5.2E-14 101.8 21.6 188 159-379 10-252 (283)
34 d3d31a2 c.37.1.12 (A:1-229) Su 99.0 3.4E-10 2.5E-14 103.4 10.5 114 189-316 20-193 (229)
35 d1v43a3 c.37.1.12 (A:7-245) Hy 99.0 2.2E-10 1.6E-14 105.2 8.2 113 189-315 26-201 (239)
36 d2awna2 c.37.1.12 (A:4-235) Ma 99.0 2.9E-10 2.1E-14 104.1 8.9 114 189-316 20-196 (232)
37 d1l2ta_ c.37.1.12 (A:) MJ0796 99.0 9.4E-10 6.8E-14 100.5 12.3 111 189-313 25-208 (230)
38 d1g2912 c.37.1.12 (1:1-240) Ma 99.0 4.5E-10 3.2E-14 103.3 10.0 113 189-315 23-204 (240)
39 d1ji0a_ c.37.1.12 (A:) Branche 99.0 5.4E-10 3.9E-14 103.0 9.4 113 189-316 26-204 (240)
40 d1oxxk2 c.37.1.12 (K:1-242) Gl 99.0 4.9E-10 3.6E-14 103.0 8.1 112 189-314 25-204 (242)
41 d1vpla_ c.37.1.12 (A:) Putativ 98.9 2E-09 1.4E-13 99.0 11.2 112 189-315 22-197 (238)
42 d3dhwc1 c.37.1.12 (C:1-240) Me 98.9 7.5E-10 5.4E-14 101.8 8.1 113 189-315 25-205 (240)
43 d3b60a1 c.37.1.12 (A:329-581) 98.9 4E-09 2.9E-13 97.7 11.6 111 189-315 35-215 (253)
44 d1l7vc_ c.37.1.12 (C:) ABC tra 98.9 2.9E-09 2.1E-13 97.5 10.3 113 189-316 19-197 (231)
45 d1jj7a_ c.37.1.12 (A:) Peptide 98.9 3.6E-09 2.6E-13 97.9 11.0 112 189-314 34-215 (251)
46 d1ye8a1 c.37.1.11 (A:1-178) Hy 98.9 1.2E-08 8.6E-13 88.0 13.6 130 197-343 2-174 (178)
47 d2pmka1 c.37.1.12 (A:467-707) 98.9 6.8E-09 5E-13 95.4 11.9 111 189-315 23-202 (241)
48 d2onka1 c.37.1.12 (A:1-240) Mo 98.9 2.9E-09 2.1E-13 97.6 9.2 107 196-316 25-192 (240)
49 d2hyda1 c.37.1.12 (A:324-578) 98.8 1.1E-08 7.7E-13 94.9 11.3 111 189-315 38-217 (255)
50 d1g6ha_ c.37.1.12 (A:) MJ1267 98.8 1E-08 7.4E-13 95.1 11.0 53 248-315 162-214 (254)
51 d1b0ua_ c.37.1.12 (A:) ATP-bin 98.8 8.9E-09 6.5E-13 95.6 10.0 56 245-315 158-213 (258)
52 d1mv5a_ c.37.1.12 (A:) Multidr 98.7 8.4E-09 6.1E-13 94.9 8.1 110 190-315 23-202 (242)
53 d1sgwa_ c.37.1.12 (A:) Putativ 98.7 9.8E-09 7.1E-13 91.8 8.0 108 189-310 21-185 (200)
54 d1r0wa_ c.37.1.12 (A:) Cystic 98.7 3E-08 2.2E-12 93.1 9.8 110 190-314 57-221 (281)
55 d1zp6a1 c.37.1.25 (A:6-181) Hy 98.3 1.1E-06 7.8E-11 74.7 9.2 37 195-231 4-40 (176)
56 d2a5yb3 c.37.1.20 (B:109-385) 98.2 7.8E-06 5.7E-10 75.9 14.8 172 161-372 20-225 (277)
57 d1lw7a2 c.37.1.1 (A:220-411) T 98.2 2E-07 1.5E-11 79.6 3.2 41 194-234 6-46 (192)
58 d1tf7a2 c.37.1.11 (A:256-497) 98.2 2.2E-06 1.6E-10 77.1 10.3 108 191-309 22-160 (242)
59 d1kaga_ c.37.1.2 (A:) Shikimat 98.2 5.9E-07 4.3E-11 74.9 5.6 31 196-226 3-33 (169)
60 d1tf7a1 c.37.1.11 (A:14-255) C 98.0 1.2E-05 8.5E-10 71.2 10.4 112 191-312 22-173 (242)
61 d1qhxa_ c.37.1.3 (A:) Chloramp 98.0 2.2E-06 1.6E-10 72.5 4.8 36 195-230 3-38 (178)
62 d1rkba_ c.37.1.1 (A:) Adenylat 98.0 1.1E-06 8.1E-11 74.3 2.8 29 197-225 6-34 (173)
63 g1f2t.1 c.37.1.12 (A:,B:) Rad5 98.0 1.7E-05 1.2E-09 72.4 11.0 62 247-330 218-279 (292)
64 d1u94a1 c.37.1.11 (A:6-268) Re 98.0 9.9E-06 7.2E-10 74.7 9.3 121 191-312 50-192 (263)
65 d1p9ra_ c.37.1.11 (A:) Extrace 98.0 5.5E-05 4E-09 73.8 15.3 123 154-312 131-263 (401)
66 d1viaa_ c.37.1.2 (A:) Shikimat 98.0 4.2E-06 3E-10 71.2 6.1 32 196-227 1-32 (161)
67 d1ly1a_ c.37.1.1 (A:) Polynucl 98.0 3.3E-05 2.4E-09 63.8 11.7 36 196-232 3-38 (152)
68 d1zaka1 c.37.1.1 (A:3-127,A:15 97.9 3.1E-06 2.3E-10 73.6 4.8 41 194-236 2-42 (189)
69 d2iyva1 c.37.1.2 (A:2-166) Shi 97.9 7.1E-06 5.1E-10 69.7 7.0 30 198-227 4-33 (165)
70 d1xp8a1 c.37.1.11 (A:15-282) R 97.9 2.2E-05 1.6E-09 72.5 10.8 124 191-314 53-197 (268)
71 d1y63a_ c.37.1.1 (A:) Probable 97.9 3.5E-06 2.5E-10 71.4 4.4 29 193-221 3-31 (174)
72 d1yj5a2 c.37.1.1 (A:351-522) 5 97.9 3.4E-05 2.5E-09 66.2 11.0 37 193-231 12-48 (172)
73 d1knqa_ c.37.1.17 (A:) Glucona 97.9 2.5E-06 1.8E-10 72.2 3.4 34 194-227 5-38 (171)
74 d1e6ca_ c.37.1.2 (A:) Shikimat 97.8 3E-06 2.2E-10 72.5 3.0 31 196-226 3-33 (170)
75 d1cr2a_ c.37.1.11 (A:) Gene 4 97.8 2.2E-05 1.6E-09 72.0 9.0 39 190-228 30-72 (277)
76 d1teva_ c.37.1.1 (A:) UMP/CMP 97.8 5.4E-05 3.9E-09 65.4 10.6 37 195-233 1-37 (194)
77 d2bdta1 c.37.1.25 (A:1-176) Hy 97.8 5.1E-06 3.7E-10 69.8 3.6 29 196-224 3-31 (176)
78 d1wb9a2 c.37.1.12 (A:567-800) 97.8 0.00013 9.8E-09 65.7 13.5 107 195-317 41-170 (234)
79 d1ak2a1 c.37.1.1 (A:14-146,A:1 97.8 1.5E-05 1.1E-09 69.1 6.2 39 194-234 2-40 (190)
80 d2qy9a2 c.37.1.10 (A:285-495) 97.8 8.7E-05 6.3E-09 65.9 11.4 116 193-318 7-148 (211)
81 d3adka_ c.37.1.1 (A:) Adenylat 97.8 8.6E-06 6.3E-10 71.0 4.7 42 193-236 6-47 (194)
82 d1okkd2 c.37.1.10 (D:97-303) G 97.7 0.00012 8.7E-09 64.8 12.1 115 194-318 5-145 (207)
83 d1mo6a1 c.37.1.11 (A:1-269) Re 97.7 3.8E-05 2.7E-09 70.9 8.9 122 191-312 56-198 (269)
84 d1bifa1 c.37.1.7 (A:37-249) 6- 97.7 0.00012 8.4E-09 63.6 11.7 36 195-230 2-40 (213)
85 d1ls1a2 c.37.1.10 (A:89-295) G 97.7 0.00011 8.3E-09 64.9 11.5 110 194-317 9-142 (207)
86 d1qf9a_ c.37.1.1 (A:) UMP/CMP 97.7 9E-06 6.6E-10 70.7 3.9 39 193-233 4-42 (194)
87 d2i3ba1 c.37.1.11 (A:1-189) Ca 97.7 6.6E-06 4.8E-10 69.7 2.8 24 196-219 2-25 (189)
88 d1j8yf2 c.37.1.10 (F:87-297) G 97.7 7E-05 5.1E-09 66.6 9.8 70 193-262 10-102 (211)
89 d1m8pa3 c.37.1.15 (A:391-573) 97.7 4.1E-06 3E-10 70.9 1.4 27 194-220 5-31 (183)
90 d1szpa2 c.37.1.11 (A:145-395) 97.7 4.8E-05 3.5E-09 67.4 8.5 79 191-269 30-144 (251)
91 d2cdna1 c.37.1.1 (A:1-181) Ade 97.7 2E-05 1.4E-09 67.7 5.3 38 197-236 2-39 (181)
92 d1ukza_ c.37.1.1 (A:) Uridylat 97.6 1.6E-05 1.1E-09 69.3 4.5 37 195-233 8-44 (196)
93 d1a1va1 c.37.1.14 (A:190-325) 97.6 0.0002 1.5E-08 58.2 11.2 34 196-229 9-42 (136)
94 d1zina1 c.37.1.1 (A:1-125,A:16 97.6 1.5E-05 1.1E-09 68.2 4.1 36 197-234 2-37 (182)
95 d1ewqa2 c.37.1.12 (A:542-765) 97.6 7.7E-05 5.6E-09 66.9 8.9 101 196-313 36-159 (224)
96 d1x6va3 c.37.1.4 (A:34-228) Ad 97.6 5.6E-06 4.1E-10 71.4 0.4 28 194-221 18-45 (195)
97 d1vmaa2 c.37.1.10 (A:82-294) G 97.6 0.00017 1.3E-08 64.0 10.4 27 193-219 9-35 (213)
98 d1g6oa_ c.37.1.11 (A:) Hexamer 97.5 3.7E-05 2.7E-09 72.9 5.5 69 195-263 166-244 (323)
99 d1s3ga1 c.37.1.1 (A:1-125,A:16 97.5 2.8E-05 2E-09 66.9 4.1 35 197-233 2-36 (182)
100 d2ak3a1 c.37.1.1 (A:0-124,A:16 97.5 2.5E-05 1.8E-09 68.1 3.9 38 195-234 6-43 (189)
101 d1akya1 c.37.1.1 (A:3-130,A:16 97.5 3.2E-05 2.3E-09 66.4 4.3 38 196-235 3-40 (180)
102 d1e4va1 c.37.1.1 (A:1-121,A:15 97.5 3.4E-05 2.5E-09 66.0 4.0 29 197-225 2-30 (179)
103 d1ckea_ c.37.1.1 (A:) CMP kina 97.4 4.7E-05 3.4E-09 66.8 4.1 34 197-232 5-38 (225)
104 d1nlfa_ c.37.1.11 (A:) Hexamer 97.4 0.00021 1.5E-08 64.9 8.7 28 191-218 25-52 (274)
105 d1q3ta_ c.37.1.1 (A:) CMP kina 97.3 6.3E-05 4.6E-09 66.3 3.6 32 198-231 6-37 (223)
106 d1pzna2 c.37.1.11 (A:96-349) D 97.2 0.00039 2.9E-08 61.8 8.5 28 191-218 32-59 (254)
107 d1khta_ c.37.1.1 (A:) Adenylat 97.2 0.00011 8.2E-09 61.9 4.2 25 196-220 2-26 (190)
108 d1yksa1 c.37.1.14 (A:185-324) 97.2 0.0002 1.5E-08 57.4 5.6 20 193-212 5-24 (140)
109 d1m7ga_ c.37.1.4 (A:) Adenosin 97.2 0.00011 8.2E-09 64.9 4.0 41 193-233 22-66 (208)
110 d1np6a_ c.37.1.10 (A:) Molybdo 97.1 9.4E-05 6.8E-09 61.8 2.8 23 197-219 4-26 (170)
111 d1rz3a_ c.37.1.6 (A:) Hypothet 97.1 0.00016 1.1E-08 61.8 4.1 44 167-220 4-47 (198)
112 d1n0wa_ c.37.1.11 (A:) DNA rep 97.0 0.00016 1.2E-08 62.0 3.2 28 191-218 19-46 (242)
113 d1w36d1 c.37.1.19 (D:2-360) Ex 96.9 0.0018 1.3E-07 61.7 10.8 20 196-215 164-183 (359)
114 d1nksa_ c.37.1.1 (A:) Adenylat 96.8 0.00016 1.2E-08 61.2 1.9 25 197-221 3-27 (194)
115 d2gj8a1 c.37.1.8 (A:216-376) P 96.8 0.0015 1.1E-07 53.8 7.8 21 197-217 3-23 (161)
116 d1gkya_ c.37.1.1 (A:) Guanylat 96.8 0.00039 2.8E-08 59.9 3.9 27 197-223 3-29 (186)
117 d1v5wa_ c.37.1.11 (A:) Meiotic 96.7 0.00038 2.8E-08 61.7 3.6 27 191-217 33-59 (258)
118 d1wf3a1 c.37.1.8 (A:3-180) GTP 96.7 0.01 7.4E-07 49.7 12.5 22 197-218 7-28 (178)
119 d1lvga_ c.37.1.1 (A:) Guanylat 96.7 0.00046 3.3E-08 59.7 3.7 27 198-224 3-29 (190)
120 d1znwa1 c.37.1.1 (A:20-201) Gu 96.6 0.00058 4.3E-08 58.3 3.7 26 195-220 2-27 (182)
121 d1mkya1 c.37.1.8 (A:2-172) Pro 96.5 0.0071 5.2E-07 50.3 10.0 21 197-217 2-22 (171)
122 d1ctqa_ c.37.1.8 (A:) cH-p21 R 96.4 0.0015 1.1E-07 54.5 5.3 21 197-217 5-25 (166)
123 d1r8sa_ c.37.1.8 (A:) ADP-ribo 96.4 0.0029 2.1E-07 51.5 7.0 21 197-217 2-22 (160)
124 d2f7sa1 c.37.1.8 (A:5-190) Rab 96.4 0.0095 6.9E-07 50.2 10.6 21 197-217 7-27 (186)
125 d2p67a1 c.37.1.10 (A:1-327) LA 96.4 0.0051 3.7E-07 57.7 9.4 69 195-263 54-155 (327)
126 d1uj2a_ c.37.1.6 (A:) Uridine- 96.3 0.001 7.4E-08 58.0 3.4 27 195-221 2-28 (213)
127 d2fz4a1 c.37.1.19 (A:24-229) D 96.3 0.0076 5.5E-07 52.3 9.3 51 162-228 68-118 (206)
128 d1zj6a1 c.37.1.8 (A:2-178) ADP 96.3 0.0041 3E-07 51.8 7.2 25 194-218 14-38 (177)
129 d2gjsa1 c.37.1.8 (A:91-258) Ra 96.3 0.0038 2.7E-07 52.1 7.0 21 198-218 4-24 (168)
130 d2i1qa2 c.37.1.11 (A:65-322) D 96.2 0.00088 6.4E-08 58.8 2.7 28 191-218 30-57 (258)
131 d1zd9a1 c.37.1.8 (A:18-181) AD 96.2 0.011 7.8E-07 48.9 9.5 21 197-217 4-24 (164)
132 d1u0ja_ c.37.1.20 (A:) Rep 40 96.2 0.0037 2.7E-07 57.0 7.0 58 193-265 102-159 (267)
133 d2fh5b1 c.37.1.8 (B:63-269) Si 96.2 0.0042 3.1E-07 53.5 7.1 22 196-217 1-22 (207)
134 d1gkub1 c.37.1.16 (B:1-250) He 96.2 0.0041 3E-07 55.0 7.1 35 194-228 57-94 (237)
135 d1fzqa_ c.37.1.8 (A:) ADP-ribo 96.2 0.0065 4.7E-07 50.6 8.0 22 196-217 17-38 (176)
136 d1tuea_ c.37.1.20 (A:) Replica 96.1 0.001 7.4E-08 58.1 2.5 34 191-224 49-82 (205)
137 d1kaoa_ c.37.1.8 (A:) Rap2a {H 96.1 0.0054 3.9E-07 50.9 7.1 21 197-217 5-25 (167)
138 d1xjca_ c.37.1.10 (A:) Molybdo 96.1 0.0014 9.9E-08 54.8 3.2 23 197-219 3-25 (165)
139 d1nn5a_ c.37.1.1 (A:) Thymidyl 96.1 0.0078 5.7E-07 52.5 8.3 33 195-227 3-38 (209)
140 d2fn4a1 c.37.1.8 (A:24-196) r- 96.0 0.01 7.4E-07 49.6 8.6 21 197-217 8-28 (173)
141 d1s96a_ c.37.1.1 (A:) Guanylat 96.0 0.0024 1.7E-07 55.9 4.6 26 195-220 2-27 (205)
142 d1uf9a_ c.37.1.1 (A:) Dephosph 96.0 0.0022 1.6E-07 54.8 4.2 30 194-224 2-31 (191)
143 d1kgda_ c.37.1.1 (A:) Guanylat 96.0 0.0019 1.4E-07 55.2 3.8 25 196-220 4-28 (178)
144 d1odfa_ c.37.1.6 (A:) Hypothet 96.0 0.0037 2.7E-07 57.6 5.9 40 193-232 25-70 (286)
145 d2qm8a1 c.37.1.10 (A:5-327) Me 96.0 0.0057 4.2E-07 57.2 7.4 69 195-263 51-152 (323)
146 d2p6ra3 c.37.1.19 (A:1-202) He 96.0 0.0043 3.1E-07 53.5 5.9 19 195-213 40-58 (202)
147 d1htwa_ c.37.1.18 (A:) Hypothe 96.0 0.0029 2.1E-07 53.1 4.6 30 193-222 31-60 (158)
148 d1nrjb_ c.37.1.8 (B:) Signal r 95.8 0.018 1.3E-06 48.9 9.4 22 197-218 5-26 (209)
149 d2vp4a1 c.37.1.1 (A:12-208) De 95.8 0.0021 1.5E-07 55.0 3.0 32 193-224 7-38 (197)
150 d1kkma_ c.91.1.2 (A:) HPr kina 95.8 0.0033 2.4E-07 53.7 4.2 25 194-218 13-37 (176)
151 d1z2aa1 c.37.1.8 (A:8-171) Rab 95.7 0.0075 5.5E-07 49.9 6.4 21 197-217 4-24 (164)
152 d1h65a_ c.37.1.8 (A:) Chloropl 95.7 0.01 7.3E-07 53.5 7.6 25 194-218 31-55 (257)
153 d1u8za_ c.37.1.8 (A:) Ras-rela 95.7 0.0079 5.8E-07 50.1 6.3 21 197-217 6-26 (168)
154 d1s2ma1 c.37.1.19 (A:46-251) P 95.6 0.028 2.1E-06 48.4 10.0 53 159-215 2-57 (206)
155 d1sq5a_ c.37.1.6 (A:) Pantothe 95.6 0.0057 4.1E-07 56.9 5.4 40 193-232 78-122 (308)
156 d1knxa2 c.91.1.2 (A:133-309) H 95.6 0.004 2.9E-07 53.2 3.9 25 194-218 14-38 (177)
157 d1wp9a1 c.37.1.19 (A:1-200) pu 95.5 0.056 4E-06 45.6 11.5 32 197-228 25-60 (200)
158 d1z06a1 c.37.1.8 (A:32-196) Ra 95.5 0.0069 5E-07 50.0 5.2 21 197-217 4-24 (165)
159 d2a5ja1 c.37.1.8 (A:9-181) Rab 95.5 0.0069 5E-07 50.6 5.2 21 197-217 5-25 (173)
160 d1x1ra1 c.37.1.8 (A:10-178) Ra 95.5 0.015 1.1E-06 48.4 7.2 21 197-217 6-26 (169)
161 d2erya1 c.37.1.8 (A:10-180) r- 95.4 0.015 1.1E-06 48.3 7.2 21 197-217 7-27 (171)
162 d2qtvb1 c.37.1.8 (B:24-189) SA 95.4 0.0041 3E-07 50.4 3.4 22 197-218 2-23 (166)
163 d2ncda_ c.37.1.9 (A:) Kinesin 95.4 0.017 1.3E-06 54.7 8.4 18 195-212 125-142 (368)
164 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 95.3 0.0047 3.4E-07 51.3 3.5 24 194-217 12-35 (186)
165 d1ko7a2 c.91.1.2 (A:130-298) H 95.3 0.0058 4.2E-07 51.8 4.1 25 194-218 14-38 (169)
166 d1yrba1 c.37.1.10 (A:1-244) AT 95.3 0.0036 2.6E-07 54.9 2.8 22 198-219 3-24 (244)
167 d1c1ya_ c.37.1.8 (A:) Rap1A {H 95.3 0.02 1.5E-06 47.2 7.5 21 197-217 5-25 (167)
168 d1ksha_ c.37.1.8 (A:) ADP-ribo 95.2 0.0044 3.2E-07 51.3 2.9 22 197-218 4-25 (165)
169 d1upta_ c.37.1.8 (A:) ADP-ribo 95.2 0.006 4.4E-07 49.8 3.8 23 196-218 6-28 (169)
170 d1z0fa1 c.37.1.8 (A:8-173) Rab 95.1 0.02 1.5E-06 47.2 6.9 21 197-217 6-26 (166)
171 d1e0sa_ c.37.1.8 (A:) ADP-ribo 95.1 0.013 9.5E-07 48.8 5.7 24 194-217 11-34 (173)
172 d1jjva_ c.37.1.1 (A:) Dephosph 95.1 0.0054 4E-07 53.1 3.3 34 198-234 5-38 (205)
173 d2eyqa3 c.37.1.19 (A:546-778) 95.1 0.047 3.4E-06 48.3 9.6 55 164-231 58-115 (233)
174 d2ocpa1 c.37.1.1 (A:37-277) De 95.0 0.0074 5.4E-07 53.1 3.9 29 195-223 2-30 (241)
175 d4tmka_ c.37.1.1 (A:) Thymidyl 94.9 0.0069 5E-07 52.4 3.3 25 195-219 2-26 (210)
176 d2bmea1 c.37.1.8 (A:6-179) Rab 94.8 0.026 1.9E-06 46.8 6.8 21 197-217 7-27 (174)
177 d1puia_ c.37.1.8 (A:) Probable 94.7 0.054 3.9E-06 44.6 8.8 24 194-217 15-38 (188)
178 d1vhta_ c.37.1.1 (A:) Dephosph 94.7 0.013 9.7E-07 50.7 4.8 35 198-235 6-40 (208)
179 d1gm5a3 c.37.1.19 (A:286-549) 94.7 0.05 3.7E-06 49.0 8.9 54 165-231 87-143 (264)
180 d2cxxa1 c.37.1.8 (A:2-185) GTP 94.7 0.0069 5E-07 50.7 2.7 21 197-217 2-22 (184)
181 d1uaaa1 c.37.1.19 (A:2-307) DE 94.6 0.0061 4.4E-07 55.3 2.5 18 195-212 14-31 (306)
182 d1tmka_ c.37.1.1 (A:) Thymidyl 94.6 0.016 1.1E-06 50.6 5.0 33 195-227 3-35 (214)
183 d1hv8a1 c.37.1.19 (A:3-210) Pu 94.5 0.1 7.5E-06 44.8 10.3 57 159-216 5-63 (208)
184 d3raba_ c.37.1.8 (A:) Rab3a {R 94.5 0.0093 6.8E-07 49.6 3.1 21 197-217 7-27 (169)
185 d1xpua3 c.37.1.11 (A:129-417) 94.4 0.066 4.8E-06 48.9 9.0 28 192-219 40-67 (289)
186 d2ew1a1 c.37.1.8 (A:4-174) Rab 94.3 0.0098 7.1E-07 49.5 2.9 21 197-217 7-27 (171)
187 d1a7ja_ c.37.1.6 (A:) Phosphor 94.3 0.01 7.4E-07 54.5 3.3 36 197-232 6-44 (288)
188 d1gsia_ c.37.1.1 (A:) Thymidyl 94.3 0.016 1.2E-06 49.5 4.4 31 198-228 3-36 (208)
189 d1svia_ c.37.1.8 (A:) Probable 94.3 0.01 7.5E-07 50.4 3.0 21 197-217 25-45 (195)
190 d1pjra1 c.37.1.19 (A:1-318) DE 94.3 0.0086 6.3E-07 54.8 2.6 18 195-212 24-41 (318)
191 d2f9la1 c.37.1.8 (A:8-182) Rab 94.2 0.011 8.2E-07 49.3 3.1 21 197-217 6-26 (175)
192 d1veca_ c.37.1.19 (A:) DEAD bo 94.2 0.09 6.6E-06 45.2 9.2 50 158-210 3-55 (206)
193 g1ii8.1 c.37.1.12 (A:,B:) Rad5 94.2 0.011 8.3E-07 53.4 3.3 21 196-216 24-44 (369)
194 d2atva1 c.37.1.8 (A:5-172) Ras 94.1 0.013 9.1E-07 48.7 3.1 21 197-217 4-24 (168)
195 d1ky3a_ c.37.1.8 (A:) Rab-rela 94.1 0.013 9.1E-07 48.8 3.1 21 197-217 4-24 (175)
196 d2erxa1 c.37.1.8 (A:6-176) di- 94.0 0.013 9.3E-07 48.6 3.0 21 197-217 4-24 (171)
197 d2bmfa2 c.37.1.14 (A:178-482) 94.0 0.046 3.4E-06 49.1 7.2 18 193-210 7-24 (305)
198 d1u0la2 c.37.1.8 (A:69-293) Pr 94.0 0.015 1.1E-06 51.4 3.5 26 195-220 95-120 (225)
199 d1moza_ c.37.1.8 (A:) ADP-ribo 94.0 0.014 1E-06 49.0 3.2 27 191-217 13-39 (182)
200 d1p5zb_ c.37.1.1 (B:) Deoxycyt 94.0 0.0093 6.8E-07 52.1 2.1 26 196-221 3-28 (241)
201 d1r2qa_ c.37.1.8 (A:) Rab5a {H 93.9 0.014 1E-06 48.4 3.1 21 197-217 8-28 (170)
202 d1g16a_ c.37.1.8 (A:) Rab-rela 93.9 0.013 9.8E-07 48.3 2.9 20 198-217 5-24 (166)
203 d1z08a1 c.37.1.8 (A:17-183) Ra 93.9 0.015 1.1E-06 48.1 3.1 21 197-217 5-25 (167)
204 d1xtqa1 c.37.1.8 (A:3-169) GTP 93.9 0.014 1E-06 48.2 2.9 22 196-217 5-26 (167)
205 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 93.7 0.016 1.2E-06 48.7 3.1 21 197-217 4-24 (184)
206 d1azta2 c.37.1.8 (A:35-65,A:20 93.7 0.022 1.6E-06 49.7 4.1 22 196-217 7-28 (221)
207 d1deka_ c.37.1.1 (A:) Deoxynuc 93.7 0.013 9.7E-07 51.4 2.6 32 197-230 3-34 (241)
208 d1x3sa1 c.37.1.8 (A:2-178) Rab 93.6 0.017 1.2E-06 48.2 3.1 21 197-217 9-29 (177)
209 d2g6ba1 c.37.1.8 (A:58-227) Ra 93.6 0.017 1.3E-06 47.8 3.1 21 197-217 8-28 (170)
210 d1yzqa1 c.37.1.8 (A:14-177) Ra 93.6 0.017 1.2E-06 47.4 2.9 21 197-217 2-22 (164)
211 d1egaa1 c.37.1.8 (A:4-182) GTP 93.5 0.017 1.3E-06 47.8 2.9 21 197-217 7-27 (179)
212 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 93.5 0.018 1.3E-06 48.1 2.9 22 197-218 4-25 (177)
213 d1wmsa_ c.37.1.8 (A:) Rab9a {H 93.5 0.019 1.4E-06 47.7 3.1 21 197-217 8-28 (174)
214 d1qhla_ c.37.1.12 (A:) Cell di 93.5 0.0052 3.8E-07 51.4 -0.6 23 197-219 26-48 (222)
215 g1xew.1 c.37.1.12 (X:,Y:) Smc 93.4 0.017 1.2E-06 52.9 3.0 24 196-219 27-50 (329)
216 d1mkya2 c.37.1.8 (A:173-358) P 93.3 0.023 1.7E-06 47.5 3.5 24 194-217 7-30 (186)
217 d1e9ra_ c.37.1.11 (A:) Bacteri 93.3 0.02 1.5E-06 54.7 3.4 34 195-228 50-86 (433)
218 d1z0ja1 c.37.1.8 (A:2-168) Rab 93.3 0.021 1.5E-06 47.1 3.1 21 197-217 6-26 (167)
219 d2bcgy1 c.37.1.8 (Y:3-196) GTP 93.2 0.02 1.5E-06 48.6 2.9 20 198-217 9-28 (194)
220 d1wb1a4 c.37.1.8 (A:1-179) Elo 93.2 0.1 7.6E-06 43.4 7.6 21 197-217 7-27 (179)
221 d1lnza2 c.37.1.8 (A:158-342) O 93.1 0.013 9.5E-07 49.2 1.5 21 197-217 3-23 (185)
222 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 93.0 0.024 1.8E-06 46.8 3.1 21 197-217 5-25 (170)
223 d1mh1a_ c.37.1.8 (A:) Rac {Hum 93.0 0.021 1.6E-06 47.9 2.8 21 197-217 7-27 (183)
224 d2g3ya1 c.37.1.8 (A:73-244) GT 93.0 0.024 1.7E-06 47.2 3.0 20 198-217 6-25 (172)
225 d2fu5c1 c.37.1.8 (C:3-175) Rab 92.9 0.016 1.2E-06 48.3 1.6 21 197-217 8-28 (173)
226 d1i2ma_ c.37.1.8 (A:) Ran {Hum 92.8 0.015 1.1E-06 48.5 1.3 21 197-217 5-25 (170)
227 d1m7ba_ c.37.1.8 (A:) RhoE (RN 92.8 0.026 1.9E-06 47.4 2.9 21 197-217 4-24 (179)
228 d2jdid3 c.37.1.11 (D:82-357) C 92.7 0.32 2.3E-05 43.8 10.5 26 193-218 66-91 (276)
229 d2atxa1 c.37.1.8 (A:9-193) Rho 92.6 0.028 2.1E-06 47.3 3.0 21 197-217 11-31 (185)
230 d1xzpa2 c.37.1.8 (A:212-371) T 92.6 0.0098 7.2E-07 48.6 -0.1 21 197-217 2-22 (160)
231 d1t9ha2 c.37.1.8 (A:68-298) Pr 92.6 0.016 1.1E-06 51.5 1.2 26 194-219 96-121 (231)
232 d1udxa2 c.37.1.8 (A:157-336) O 92.6 0.017 1.3E-06 48.2 1.5 20 198-217 4-23 (180)
233 d2ngra_ c.37.1.8 (A:) CDC42 {H 92.5 0.03 2.2E-06 47.3 2.9 21 197-217 5-25 (191)
234 d1w1wa_ c.37.1.12 (A:) Smc hea 92.2 0.036 2.6E-06 52.2 3.5 25 193-217 23-47 (427)
235 g1ii8.1 c.37.1.12 (A:,B:) Rad5 92.0 0.16 1.1E-05 45.4 7.6 58 252-331 300-357 (369)
236 d1zcba2 c.37.1.8 (A:47-75,A:20 91.9 0.037 2.7E-06 46.6 2.8 20 197-216 4-23 (200)
237 d1ihua1 c.37.1.10 (A:1-296) Ar 91.9 0.076 5.5E-06 47.4 5.1 36 193-228 6-44 (296)
238 d1e69a_ c.37.1.12 (A:) Smc hea 91.8 0.035 2.5E-06 50.2 2.6 23 196-218 25-47 (308)
239 d2bv3a2 c.37.1.8 (A:7-282) Elo 91.4 0.18 1.3E-05 45.5 7.2 24 194-217 5-28 (276)
240 d2bmja1 c.37.1.8 (A:66-240) Ce 91.0 0.061 4.5E-06 44.9 3.2 22 196-217 6-27 (175)
241 d1e69a_ c.37.1.12 (A:) Smc hea 90.6 0.29 2.1E-05 43.7 7.8 48 252-315 239-286 (308)
242 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 90.5 0.065 4.7E-06 44.7 2.9 21 197-217 4-24 (200)
243 d1p6xa_ c.37.1.1 (A:) Thymidin 89.6 0.1 7.4E-06 48.6 3.7 25 196-220 7-31 (333)
244 d2b8ta1 c.37.1.24 (A:11-149) T 89.1 0.18 1.3E-05 40.7 4.5 31 198-228 5-38 (139)
245 d1byia_ c.37.1.10 (A:) Dethiob 88.8 0.16 1.2E-05 42.8 4.2 32 196-227 2-37 (224)
246 d1nija1 c.37.1.10 (A:2-223) Hy 88.6 0.14 1E-05 44.5 3.8 23 197-219 5-27 (222)
247 d1j3ba1 c.91.1.1 (A:212-529) P 88.4 0.1 7.4E-06 48.1 2.7 19 195-213 14-32 (318)
248 d1svsa1 c.37.1.8 (A:32-60,A:18 88.3 0.11 8.2E-06 42.9 2.8 21 197-217 4-24 (195)
249 d1tq4a_ c.37.1.8 (A:) Interfer 87.9 0.15 1.1E-05 48.4 3.8 24 194-217 55-78 (400)
250 d1w1wa_ c.37.1.12 (A:) Smc hea 87.3 0.32 2.3E-05 45.2 5.7 50 252-316 352-401 (427)
251 d1t5la1 c.37.1.19 (A:2-414) Nu 87.0 0.57 4.1E-05 44.5 7.3 57 160-230 10-66 (413)
252 d2olra1 c.91.1.1 (A:228-540) P 86.9 0.15 1.1E-05 46.7 3.0 19 194-212 13-31 (313)
253 d1ii2a1 c.91.1.1 (A:201-523) P 86.3 0.18 1.3E-05 46.5 3.1 19 194-212 13-31 (323)
254 d1osna_ c.37.1.1 (A:) Thymidin 85.7 0.16 1.2E-05 47.1 2.5 25 197-221 7-31 (331)
255 d1e2ka_ c.37.1.1 (A:) Thymidin 85.5 0.16 1.2E-05 47.0 2.4 25 197-221 6-30 (329)
256 d1ihua2 c.37.1.10 (A:308-586) 85.1 0.62 4.5E-05 40.9 6.2 35 195-229 20-57 (279)
257 d1qdea_ c.37.1.19 (A:) Initiat 84.9 0.29 2.1E-05 42.0 3.7 52 157-211 9-63 (212)
258 d1q0ua_ c.37.1.19 (A:) Probabl 84.2 0.2 1.4E-05 42.6 2.2 49 159-210 2-53 (209)
259 d1t6na_ c.37.1.19 (A:) Spliceo 84.0 0.27 1.9E-05 42.0 3.0 50 159-211 2-54 (207)
260 d2g9na1 c.37.1.19 (A:21-238) I 84.0 0.3 2.2E-05 42.1 3.4 52 158-212 12-66 (218)
261 d2dy1a2 c.37.1.8 (A:8-274) Elo 82.7 0.33 2.4E-05 43.5 3.1 22 196-217 3-24 (267)
262 d1c4oa1 c.37.1.19 (A:2-409) Nu 81.5 1.2 8.5E-05 42.2 6.8 53 164-230 11-63 (408)
263 d1cp2a_ c.37.1.10 (A:) Nitroge 80.7 0.57 4.2E-05 41.0 4.0 33 197-229 3-38 (269)
264 d2j0sa1 c.37.1.19 (A:22-243) P 80.6 0.56 4E-05 40.5 3.8 50 158-210 17-69 (222)
265 d1goja_ c.37.1.9 (A:) Kinesin 80.1 0.41 3E-05 44.4 2.9 18 195-212 80-97 (354)
266 d1bg2a_ c.37.1.9 (A:) Kinesin 79.2 0.36 2.7E-05 44.2 2.2 19 194-212 75-93 (323)
267 d1g7sa4 c.37.1.8 (A:1-227) Ini 78.9 0.47 3.4E-05 40.9 2.7 21 198-218 8-28 (227)
268 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 78.6 0.38 2.8E-05 47.2 2.2 17 196-212 25-41 (623)
269 d1sdma_ c.37.1.9 (A:) Kinesin 78.5 0.96 7E-05 42.0 5.0 18 195-212 75-92 (364)
270 d2c78a3 c.37.1.8 (A:9-212) Elo 78.1 0.46 3.4E-05 40.4 2.4 24 194-217 2-25 (204)
271 d2jdia3 c.37.1.11 (A:95-379) C 77.3 0.65 4.7E-05 41.8 3.2 26 192-217 65-90 (285)
272 d1f9va_ c.37.1.9 (A:) Kinesin 77.0 1.2 8.7E-05 40.8 5.2 44 159-212 53-100 (342)
273 d1rifa_ c.37.1.23 (A:) DNA hel 76.9 1.3 9.1E-05 39.6 5.1 40 163-218 112-151 (282)
274 d1hyqa_ c.37.1.10 (A:) Cell di 76.7 1 7.6E-05 37.9 4.4 32 198-229 4-39 (232)
275 d1ry6a_ c.37.1.9 (A:) Kinesin 76.3 0.38 2.7E-05 44.2 1.3 47 195-253 85-131 (330)
276 d1g3qa_ c.37.1.10 (A:) Cell di 76.2 1.2 8.5E-05 37.6 4.5 33 197-229 4-40 (237)
277 d1oywa2 c.37.1.19 (A:1-206) Re 75.8 0.75 5.5E-05 38.5 3.1 23 195-217 40-62 (206)
278 d1g8fa3 c.37.1.15 (A:390-511) 74.9 0.79 5.7E-05 35.9 2.7 25 195-219 6-30 (122)
279 d1fx0a3 c.37.1.11 (A:97-372) C 74.1 0.72 5.3E-05 41.3 2.6 26 192-217 64-89 (276)
280 d1lkxa_ c.37.1.9 (A:) Myosin S 73.5 0.84 6.1E-05 46.2 3.2 27 193-219 84-110 (684)
281 d2afhe1 c.37.1.10 (E:1-289) Ni 73.4 1.2 8.8E-05 39.3 4.0 33 197-229 4-39 (289)
282 d1d0xa2 c.37.1.9 (A:2-33,A:80- 72.9 0.88 6.4E-05 46.2 3.2 27 193-219 123-149 (712)
283 d1ni3a1 c.37.1.8 (A:11-306) Yc 72.1 1.2 9.1E-05 39.7 3.8 24 194-217 9-32 (296)
284 d1br2a2 c.37.1.9 (A:80-789) My 71.6 0.98 7.2E-05 45.9 3.2 27 193-219 89-115 (710)
285 d2mysa2 c.37.1.9 (A:4-33,A:80- 71.5 0.96 7E-05 46.6 3.1 27 193-219 121-147 (794)
286 d1v8ka_ c.37.1.9 (A:) Kinesin 71.5 0.61 4.4E-05 43.4 1.5 18 195-212 114-131 (362)
287 d1w7ja2 c.37.1.9 (A:63-792) My 70.6 1.1 7.7E-05 45.8 3.2 27 193-219 92-118 (730)
288 d1z3ix2 c.37.1.19 (X:92-389) R 70.0 7.4 0.00054 34.1 8.7 44 193-236 77-130 (298)
289 d1puja_ c.37.1.8 (A:) Probable 69.9 1.3 9.4E-05 39.2 3.3 25 194-218 111-135 (273)
290 d2akab1 c.37.1.8 (B:6-304) Dyn 68.9 1.7 0.00012 38.5 3.9 22 197-218 28-49 (299)
291 d1c9ka_ c.37.1.11 (A:) Adenosy 68.3 1.6 0.00012 36.3 3.4 32 198-230 2-33 (180)
292 d1kk8a2 c.37.1.9 (A:1-28,A:77- 68.0 1.2 8.8E-05 45.7 3.0 26 194-219 120-145 (789)
293 d1g5ta_ c.37.1.11 (A:) ATP:cor 67.8 15 0.0011 29.4 9.4 69 243-330 79-151 (157)
294 d1wxqa1 c.37.1.8 (A:1-319) GTP 67.4 1.3 9.2E-05 39.9 2.7 20 198-217 3-22 (319)
295 d1n0ua2 c.37.1.8 (A:3-343) Elo 67.1 1.5 0.00011 40.4 3.1 24 194-217 16-39 (341)
296 d1x88a1 c.37.1.9 (A:18-362) Ki 67.1 1.6 0.00012 40.0 3.4 18 195-212 81-98 (345)
297 d2zfia1 c.37.1.9 (A:4-352) Kin 67.0 1.9 0.00014 39.5 4.0 43 195-252 87-129 (349)
298 d1htaa_ a.22.1.2 (A:) Archaeal 66.0 3.6 0.00026 28.1 4.4 32 371-402 36-67 (68)
299 d1w36b1 c.37.1.19 (B:1-485) Ex 65.5 1.5 0.00011 41.0 2.9 19 194-212 15-33 (485)
300 d1wrba1 c.37.1.19 (A:164-401) 65.3 1.3 9.6E-05 38.3 2.3 16 195-210 58-73 (238)
301 d1jala1 c.37.1.8 (A:1-278) Ych 63.2 2.3 0.00017 37.4 3.6 22 196-217 3-24 (278)
302 d2qn6a3 c.37.1.8 (A:2-206) Ini 62.9 2.4 0.00018 35.3 3.5 25 193-217 6-30 (205)
303 d1z63a1 c.37.1.19 (A:432-661) 60.3 6.2 0.00045 33.1 5.9 40 194-233 30-74 (230)
304 d1f5na2 c.37.1.8 (A:7-283) Int 59.6 1.9 0.00014 38.3 2.3 23 196-218 33-55 (277)
305 d1d2ea3 c.37.1.8 (A:55-250) El 59.4 2.3 0.00017 35.6 2.7 22 196-217 4-25 (196)
306 d1zunb3 c.37.1.8 (B:16-237) Su 57.4 3.4 0.00025 35.2 3.5 25 196-220 10-34 (222)
307 d1tafb_ a.22.1.3 (B:) TAF(II)6 56.1 5.8 0.00042 27.5 3.9 32 370-401 38-69 (70)
308 g1xew.1 c.37.1.12 (X:,Y:) Smc 56.0 13 0.00096 32.3 7.6 55 246-316 238-292 (329)
309 d1jnya3 c.37.1.8 (A:4-227) Elo 55.0 3.1 0.00022 35.3 2.8 25 196-220 4-28 (224)
310 d1kk1a3 c.37.1.8 (A:6-200) Ini 55.0 3.6 0.00026 33.8 3.2 21 197-217 7-27 (195)
311 d1jwyb_ c.37.1.8 (B:) Dynamin 51.2 3.8 0.00027 36.2 2.9 22 197-218 26-47 (306)
312 d1llua2 c.2.1.1 (A:144-309) Al 50.8 41 0.003 25.9 9.3 40 188-229 21-60 (166)
313 d1r5ba3 c.37.1.8 (A:215-459) E 50.5 3.3 0.00024 35.9 2.2 27 193-219 22-48 (245)
314 d2avda1 c.66.1.1 (A:44-262) CO 50.4 14 0.001 31.1 6.4 69 193-262 58-143 (219)
315 d1khba1 c.91.1.1 (A:260-622) C 49.7 2.7 0.00019 38.6 1.5 20 196-215 17-38 (363)
316 d1ku5a_ a.22.1.2 (A:) Archaeal 48.3 6.3 0.00046 26.6 3.0 31 371-401 35-65 (66)
317 d1f1ea_ a.22.1.2 (A:) Archaeal 48.0 9.1 0.00067 30.4 4.5 38 371-408 112-149 (151)
318 d1f60a3 c.37.1.8 (A:2-240) Elo 46.8 5.6 0.00041 34.2 3.2 25 196-220 7-31 (239)
319 d1rjwa2 c.2.1.1 (A:138-305) Al 46.4 57 0.0041 24.8 9.8 41 188-230 21-61 (168)
320 d1miob_ c.92.2.3 (B:) Nitrogen 44.5 5.9 0.00043 37.4 3.2 63 195-260 36-101 (457)
321 d2bykb1 a.22.1.3 (B:11-99) Chr 43.4 14 0.001 26.4 4.5 32 372-403 35-66 (89)
322 d1dz3a_ c.23.1.1 (A:) Sporulat 41.9 53 0.0039 24.1 8.2 18 245-262 38-55 (123)
323 d1mb3a_ c.23.1.1 (A:) Cell div 40.1 43 0.0032 24.5 7.4 85 245-348 36-121 (123)
324 d1jbea_ c.23.1.1 (A:) CheY pro 39.9 65 0.0047 23.7 9.0 86 245-350 40-127 (128)
325 d1fxkc_ a.2.5.1 (C:) Prefoldin 39.4 42 0.003 25.2 7.2 55 16-70 69-127 (133)
326 d1n1ja_ a.22.1.3 (A:) Nuclear 37.3 22 0.0016 25.1 4.8 33 372-404 38-70 (87)
327 d2huec1 a.22.1.1 (C:20-101) Hi 37.3 10 0.00076 26.9 2.8 33 370-402 41-73 (82)
328 d1fxkc_ a.2.5.1 (C:) Prefoldin 35.3 30 0.0022 26.1 5.7 43 37-79 87-129 (133)
329 d1e52a_ a.2.9.1 (A:) C-termina 35.2 18 0.0013 23.7 3.5 34 43-76 15-53 (56)
330 d1jfib_ a.22.1.3 (B:) Negative 31.3 30 0.0022 26.7 5.0 34 371-404 38-71 (135)
331 d1kjwa2 c.37.1.1 (A:526-724) G 31.2 18 0.0013 29.7 3.8 27 193-222 7-33 (199)
332 d1h75a_ c.47.1.1 (A:) Glutared 31.2 57 0.0041 21.7 6.1 33 197-229 2-34 (76)
333 d1n1jb_ a.22.1.3 (B:) Nuclear 31.0 16 0.0012 25.2 3.0 31 372-402 35-65 (78)
334 d1nkpa_ a.38.1.1 (A:) Myc prot 30.4 73 0.0053 22.0 6.8 33 47-79 54-86 (88)
335 d1m1nb_ c.92.2.3 (B:) Nitrogen 30.1 19 0.0014 34.5 4.2 74 190-267 79-165 (522)
336 d1zesa1 c.23.1.1 (A:3-123) Pho 29.3 75 0.0055 23.0 7.1 84 245-348 35-120 (121)
337 d1qora2 c.2.1.1 (A:113-291) Qu 29.1 1.1E+02 0.0083 23.2 10.5 41 188-230 22-63 (179)
338 d2ayxa1 c.23.1.1 (A:817-949) S 28.9 1E+02 0.0075 22.7 8.4 84 245-349 43-127 (133)
339 d1yb5a2 c.2.1.1 (A:121-294) Qu 28.3 77 0.0056 24.4 7.4 40 188-229 22-62 (174)
340 d1p3da1 c.5.1.1 (A:11-106) UDP 27.6 29 0.0021 24.9 4.0 35 193-231 6-40 (96)
341 d1qh8b_ c.92.2.3 (B:) Nitrogen 27.0 21 0.0015 34.1 4.0 68 195-267 82-164 (519)
342 d1r0ka2 c.2.1.3 (A:3-126,A:265 26.7 54 0.0039 25.6 5.9 57 194-262 1-59 (150)
343 d1p6qa_ c.23.1.1 (A:) CheY pro 25.7 1.2E+02 0.0084 22.2 9.3 85 245-348 42-127 (129)
344 d1xbta1 c.37.1.24 (A:18-150) T 25.6 29 0.0021 26.5 3.9 30 198-227 5-37 (133)
345 d1fxka_ a.2.5.1 (A:) Prefoldin 23.5 77 0.0056 22.8 6.0 35 42-76 69-103 (107)
346 d1nkpa_ a.38.1.1 (A:) Myc prot 23.0 89 0.0065 21.5 6.0 35 37-71 51-85 (88)
347 d1xx6a1 c.37.1.24 (A:2-142) Th 22.9 34 0.0025 26.4 3.8 31 197-227 9-42 (141)
348 d1i3ca_ c.23.1.1 (A:) Response 22.8 1.4E+02 0.01 22.2 10.0 17 330-346 114-130 (144)
349 d1ab4a_ e.11.1.1 (A:) DNA Gyra 22.7 58 0.0042 30.6 6.3 42 38-79 440-481 (493)
350 d1j5xa_ c.80.1.1 (A:) Hypothet 22.4 47 0.0034 29.1 5.3 97 160-260 4-120 (329)
351 d2azeb1 e.63.1.2 (B:201-301) T 22.2 96 0.007 22.4 6.1 35 40-74 3-37 (101)
352 d1piwa2 c.2.1.1 (A:153-320) Ci 21.1 38 0.0028 26.3 3.9 42 187-230 20-61 (168)
353 d1uufa2 c.2.1.1 (A:145-312) Hy 20.7 48 0.0035 25.6 4.5 42 187-230 23-64 (168)
354 d2axpa1 c.37.1.1 (A:2-165) Hyp 20.5 95 0.0069 22.9 5.7 31 198-228 3-33 (164)
355 d1qvra2 c.37.1.20 (A:149-535) 20.4 1.2E+02 0.009 27.1 8.0 25 41-65 285-309 (387)
356 d1tafa_ a.22.1.3 (A:) TAF(II)4 20.4 1.2E+02 0.0086 20.3 6.5 60 341-402 6-65 (68)
357 d1rw1a_ c.47.1.12 (A:) Hypothe 20.1 54 0.0039 23.9 4.4 30 198-227 2-31 (114)
No 1
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=3.8e-52 Score=396.23 Aligned_cols=251 Identities=42% Similarity=0.696 Sum_probs=230.3
Q ss_pred ccCCCCCcccccCcHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcchh
Q 014743 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV 232 (419)
Q Consensus 153 ~~~p~~~~~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~ 232 (419)
+..+.++|+||+|+++++++|.+.|.+ +++|+.|.++|+.+|+++|||||||||||++|+++|++++.++++++++++.
T Consensus 4 ~~~~~~t~~Di~Gl~~~k~~l~e~v~~-~~~~~~~~~~g~~~~~~iLL~GppGtGKT~la~~iA~~~~~~~~~i~~~~l~ 82 (256)
T d1lv7a_ 4 EDQIKTTFADVAGCDEAKEEVAELVEY-LREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFV 82 (256)
T ss_dssp ECSSCCCGGGSCSCHHHHHHTHHHHHH-HHCGGGC-----CCCCEEEEECCTTSCHHHHHHHHHHHHTCCEEEECSCSST
T ss_pred CCCCCCCHHHHhchHHHHHHHHHHHHH-HHCHHHHHHcCCCCCCeEEeeCCCCCCccHHHHHHHHHcCCCEEEEEhHHhh
Confidence 356889999999999999999998875 8999999999999999999999999999999999999999999999999999
Q ss_pred hhhhchhHHHHHHHHHHHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCeEEEEEeCCcc
Q 014743 233 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRID 312 (419)
Q Consensus 233 ~~~~g~~~~~i~~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~ 312 (419)
++|+|+++..++++|+.|+.++||||||||+|++++.|..... +.+....+++.+++..++++....+++||+|||+++
T Consensus 83 ~~~~g~~~~~l~~~f~~A~~~~P~il~iDeiD~l~~~r~~~~~-~~~~~~~~~~~~ll~~~d~~~~~~~v~vIatTn~~~ 161 (256)
T d1lv7a_ 83 EMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLG-GGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPD 161 (256)
T ss_dssp TSCCCCCHHHHHHHHHHHHTTCSEEEEETTHHHHTCCCSTTSC-CTTCHHHHHHHHHHHHHHTCCSSSCEEEEEEESCTT
T ss_pred hcchhHHHHHHHHHHHHHHHcCCEEEEEEChhhhCccCCCCCC-CCcHHHHHHHHHHHHHhhCCCCCCCEEEEEeCCCcc
Confidence 9999999999999999999999999999999999998865433 334556677889999999888888999999999999
Q ss_pred hhhHHhcCCCceeEEEEcCCCCHHHHHHHHHHHHhhcccCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcCCCCC
Q 014743 313 ILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVT 392 (419)
Q Consensus 313 ~ld~allr~gRfd~~I~~~~P~~~~r~~Il~~~~~~~~~~~~~dl~~la~~t~G~sgadi~~l~~~A~~~a~~~~~~~vt 392 (419)
.+|++++||||||+.|+|++|+.++|.+|++.+++++++..++++..++..|+||||+||.++|++|++.|+++++..++
T Consensus 162 ~ld~al~R~gRfd~~i~i~~P~~~~R~~il~~~l~~~~~~~~~~~~~la~~t~G~s~adi~~l~~~A~~~a~~~~~~~i~ 241 (256)
T d1lv7a_ 162 VLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVS 241 (256)
T ss_dssp TSCGGGGSTTSSCEEEECCCCCHHHHHHHHHHHHTTSCBCTTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHTTCSSBC
T ss_pred cCCHhHcCCCCCCEEEECCCcCHHHHHHHHHHhccCCCcCcccCHHHHHHhCCCCCHHHHHHHHHHHHHHHHHcCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh
Q 014743 393 QEDFEMAVAKVMK 405 (419)
Q Consensus 393 ~eD~~~Al~~v~~ 405 (419)
.+||+.|+++++.
T Consensus 242 ~~d~~~Al~rv~~ 254 (256)
T d1lv7a_ 242 MVEFEKAKDKIMM 254 (256)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999863
No 2
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=1.7e-51 Score=389.93 Aligned_cols=245 Identities=44% Similarity=0.753 Sum_probs=226.0
Q ss_pred cCCCCCcccccCcHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcchhh
Q 014743 154 KVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ 233 (419)
Q Consensus 154 ~~p~~~~~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~~ 233 (419)
+.|+++|+||+|+++++++|.+.|.. +.+|+.|.++|..+|+++|||||||||||++|+++|++++.+++.++++++.+
T Consensus 2 ~~p~~~~~di~G~~~~k~~l~~~i~~-l~~~~~~~~~g~~~~~giLl~GppGtGKT~la~aia~~~~~~~~~i~~~~l~~ 80 (247)
T d1ixza_ 2 EAPKVTFKDVAGAEEAKEELKEIVEF-LKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVE 80 (247)
T ss_dssp CCCSCCGGGCCSCHHHHHHHHHHHHH-HHCHHHHHHTTCCCCSEEEEECCTTSSHHHHHHHHHHHTTCCEEEEEHHHHHH
T ss_pred CCCCCcHHHHccHHHHHHHHHHHHHH-HHCHHHHHHcCCCCCceEEEecCCCCChhHHHHHHHHHcCCCEEEEEhHHhhh
Confidence 46889999999999999999998765 89999999999999999999999999999999999999999999999999999
Q ss_pred hhhchhHHHHHHHHHHHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCeEEEEEeCCcch
Q 014743 234 KYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDI 313 (419)
Q Consensus 234 ~~~g~~~~~i~~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~~ 313 (419)
+|+|+++..++++|..|+.++||||||||+|+|+++|.... .+.+....+++.+++..++++..+.+++||+|||+++.
T Consensus 81 ~~~g~~~~~l~~~f~~a~~~~p~Ii~iDeid~l~~~r~~~~-~~~~~~~~~~~~~ll~~~d~~~~~~~vivi~tTn~~~~ 159 (247)
T d1ixza_ 81 MFVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRKRGSGV-GGGNDEREQTLNQLLVEMDGFEKDTAIVVMAATNRPDI 159 (247)
T ss_dssp SCTTHHHHHHHHHHHHHTTSSSEEEEEETHHHHHC----------CHHHHHHHHHHHHHHHTCCTTCCEEEEEEESCGGG
T ss_pred ccccHHHHHHHHHHHHHHHcCCEEEEEEChhhhCccCCCCC-CCCcHHHHHHHHHHHHHhhCCCCCCCEEEEEeCCCccc
Confidence 99999999999999999999999999999999998886532 33456677888899999999888889999999999999
Q ss_pred hhHHhcCCCceeEEEEcCCCCHHHHHHHHHHHHhhcccCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcCCCCCH
Q 014743 314 LDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQ 393 (419)
Q Consensus 314 ld~allr~gRfd~~I~~~~P~~~~r~~Il~~~~~~~~~~~~~dl~~la~~t~G~sgadi~~l~~~A~~~a~~~~~~~vt~ 393 (419)
+|++++|+||||++|+|++|+.++|.+||+.++...+...++++..||..|+||||+||.++|++|++.|+++++..|++
T Consensus 160 ld~al~R~~Rf~~~i~~~~P~~~eR~~il~~~l~~~~~~~~~~~~~la~~t~g~s~~di~~lv~~A~l~a~~~~~~~i~~ 239 (247)
T d1ixza_ 160 LDPALLRPGRFDRQIAIDAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITM 239 (247)
T ss_dssp SCGGGGSTTSSCEEEECCSCCHHHHHHHHHHHHTTSCBCTTCCHHHHHHTCTTCCHHHHHHHHHHHHHHHHHTTCSSBCH
T ss_pred cCHhHcCCCCCcEEEEECCcCHHHHHHHHHHHhcccCCccccCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHcCCCCcCH
Confidence 99999999999999999999999999999999999998899999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 014743 394 EDFEMAV 400 (419)
Q Consensus 394 eD~~~Al 400 (419)
+||+.|+
T Consensus 240 ~d~~~A~ 246 (247)
T d1ixza_ 240 KDLEEAA 246 (247)
T ss_dssp HHHHHHT
T ss_pred HHHHHhh
Confidence 9999996
No 3
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=9.5e-50 Score=380.36 Aligned_cols=240 Identities=42% Similarity=0.772 Sum_probs=221.1
Q ss_pred CCcccccCcHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcchhhhhhc
Q 014743 158 STYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIG 237 (419)
Q Consensus 158 ~~~~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~~~~~g 237 (419)
++|+||+|+++++++|++.|..|+++|+.|.++|+++|+|+|||||||||||++++++|++++.+++.++++++.+.|+|
T Consensus 1 ~~~~dv~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~GppGtGKT~l~~ala~~~~~~~~~i~~~~l~~~~~g 80 (258)
T d1e32a2 1 VGYDDVGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAG 80 (258)
T ss_dssp CCGGGCCSCSHHHHHHHHHHHHHHHCHHHHHHCCCCCCCEEEEECCTTSSHHHHHHHHHHHTTCEEEEECHHHHTTSCTT
T ss_pred CChhhhccHHHHHHHHHHHHHHHhcCHHHHHhCCCCCCceeEEecCCCCCchHHHHHHHHHhCCeEEEEEchhhcccccc
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCeEEEEEeCCcchhhHH
Q 014743 238 EGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQA 317 (419)
Q Consensus 238 ~~~~~i~~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~~ld~a 317 (419)
..+..++.+|..|+.++||||||||+|.++++|.+.. +....+++..++..++......+++||+|||+++.+|++
T Consensus 81 ~~~~~l~~~f~~A~~~~p~il~iDeid~l~~~r~~~~----~~~~~~~~~~~~~~~~~~~~~~~vlvi~tTn~~~~ld~a 156 (258)
T d1e32a2 81 ESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTH----GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPA 156 (258)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCC----CTTHHHHHHHHHHHHHTCCCSSCEEEEEEESCGGGSCGG
T ss_pred cHHHHHHHHHHHHHhcCCeEEEehhhhhhccCCCCCC----CchHHHHHHHhccccccccccCCccEEEeCCCccccchh
Confidence 9999999999999999999999999999999885421 222345566666667776778899999999999999999
Q ss_pred hcCCCceeEEEEcCCCCHHHHHHHHHHHHhhcccCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc----------
Q 014743 318 LLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRER---------- 387 (419)
Q Consensus 318 llr~gRfd~~I~~~~P~~~~r~~Il~~~~~~~~~~~~~dl~~la~~t~G~sgadi~~l~~~A~~~a~~~~---------- 387 (419)
++||||||+.|+|++|+.++|.+||+.++++..+..++++..||..|+||||+||.++|++|++.|+++.
T Consensus 157 l~r~gRfd~~i~~~~P~~~~R~~il~~~l~~~~~~~~~~~~~la~~t~G~s~adl~~lv~~A~~~a~~~~~~~~~~~~~~ 236 (258)
T d1e32a2 157 LRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET 236 (258)
T ss_dssp GTSTTSSCEEEECCCCCHHHHHHHHHHTTTTSCBCTTCCHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHCCCSSC
T ss_pred hhhcccccceeECCCCCHHHHHHHhhhhccCcccccccchhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccccchhhhh
Confidence 9999999999999999999999999999999998899999999999999999999999999999998763
Q ss_pred -------CCCCCHHHHHHHHH
Q 014743 388 -------RIHVTQEDFEMAVA 401 (419)
Q Consensus 388 -------~~~vt~eD~~~Al~ 401 (419)
...|+++||+.|+.
T Consensus 237 ~~~~~~~~~~it~~Df~~AL~ 257 (258)
T d1e32a2 237 IDAEVMNSLAVTMDDFRWALS 257 (258)
T ss_dssp CBHHHHHHCCBCHHHHHHHHT
T ss_pred hhhhhhccCccCHHHHHHHhC
Confidence 24599999999985
No 4
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=1.2e-47 Score=367.23 Aligned_cols=232 Identities=42% Similarity=0.780 Sum_probs=208.6
Q ss_pred CCCCCcccccCcHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcchhhh
Q 014743 155 VPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK 234 (419)
Q Consensus 155 ~p~~~~~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~~~ 234 (419)
+|..+|+||+|+++++++|.+.|.+|+.+|+.|.++|+.+++++|||||||||||++++++|++++.+++.++++++.+.
T Consensus 1 ~p~~~f~di~G~~~~k~~l~~~i~~~l~~~~~~~~~g~~~~~giLL~Gp~GtGKT~l~~ala~~~~~~~~~~~~~~l~~~ 80 (265)
T d1r7ra3 1 VPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 80 (265)
T ss_dssp CCCCSCSSCSSSSCCCCHHHHHTHHHHHCHHHHHHCCCCCCCEEEEBCCTTSSHHHHHHHHHHHTTCEEEEECHHHHHTS
T ss_pred CCCCCHHHhcCHHHHHHHHHHHHHHHhhCHHHHHhCCCCCCCeEEEECCCCCcchhHHHHHHHHhCCcEEEEEHHHhhhc
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhchhHHHHHHHHHHHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCeEEEEEeCCcchh
Q 014743 235 YIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDIL 314 (419)
Q Consensus 235 ~~g~~~~~i~~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~~l 314 (419)
|.|..+..++.+|..|+.++||||||||+|.++..|.... +.......+++..++..++++....+++||+|||+++.+
T Consensus 81 ~~~~~~~~l~~~f~~A~~~~p~il~ideid~l~~~~~~~~-~~~~~~~~~~~~~ll~~l~~~~~~~~v~vi~ttn~~~~l 159 (265)
T d1r7ra3 81 WFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNI-GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDII 159 (265)
T ss_dssp CTTTHHHHHHHHHHHHHHTCSEEEEESSGGGTCCHHHHCC-CTTHHHHHHHHHHHHHTCC------CCEEEECCBSCTTT
T ss_pred cccchHHHHHHHHHHHHhcCCcceeHHhhhhccccCCCcC-CCCcHHHHHHHHHHHHHhhCcCCCCCEEEEEeCCCchhC
Confidence 9999999999999999999999999999999998875432 223345566788999999988777889999999999999
Q ss_pred hHHhcCCCceeEEEEcCCCCHHHHHHHHHHHHhhcccCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Q 014743 315 DQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRER 387 (419)
Q Consensus 315 d~allr~gRfd~~I~~~~P~~~~r~~Il~~~~~~~~~~~~~dl~~la~~t~G~sgadi~~l~~~A~~~a~~~~ 387 (419)
|++++|+||||++|+|++|+.++|.+||+.++++.....++++..|+..|+|||++||..+|++|...|+++.
T Consensus 160 d~al~r~gRf~~~i~~~~p~~~~R~~il~~~l~~~~~~~~~~l~~la~~t~g~s~~di~~lv~~A~~~A~~~~ 232 (265)
T d1r7ra3 160 DPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRES 232 (265)
T ss_dssp SCGGGSSTTSEEEEECCCCCCHHHHHHHHHHTTCC----CCCCHHHHHHHCSSCCHHHHHHHHHHHHHHHHHC
T ss_pred CHHHhCCCCccEEEEecchHHHHHHHHHHHHhccCCchhhhhHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999888889999999999999999999999999999998764
No 5
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=99.96 E-value=2.1e-34 Score=279.88 Aligned_cols=206 Identities=16% Similarity=0.191 Sum_probs=156.4
Q ss_pred cccCChhHHhhcCCCCCCeEEE-EcCCCChHHHHHHHHHhccC--CceEEEeCcchhhhhhchhHHHHHHHHHHHHhhCC
Q 014743 179 LPIKHPELFESLGIAQPKGVLL-YGPPGTGKTLLARAVAHHTD--CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAP 255 (419)
Q Consensus 179 ~~l~~~~~~~~~gi~~p~~iLL-~GPpGtGKT~LakalA~~~~--~~~i~v~~s~l~~~~~g~~~~~i~~lf~~a~~~~p 255 (419)
++...|..+..+|...|++++| |||||||||++|++||.+++ .+|+.+++++++++|+|+.+..++.+|+.|+. |
T Consensus 106 ~~~~~~~~~~~~~~~~~~g~~l~~G~pG~GKT~la~ala~~~~~~~~~~~~~~~~~~~~~~G~~e~~~~~~f~~a~~--~ 183 (321)
T d1w44a_ 106 LVGCSPVVAEFGGHRYASGMVIVTGKGNSGKTPLVHALGEALGGKDKYATVRFGEPLSGYNTDFNVFVDDIARAMLQ--H 183 (321)
T ss_dssp CCSBCCEEEEETTEEEESEEEEEECSSSSCHHHHHHHHHHHHHTTSCCEEEEBSCSSTTCBCCHHHHHHHHHHHHHH--C
T ss_pred ccccchHHHHHhhcccCCceEEEECCCCccHHHHHHHHHHHhcCCCCeEEEEhhHhhhcccchHHHHHHHHHHHHhh--c
Confidence 4566788888899888998765 89999999999999999975 78999999999999999999999999999975 8
Q ss_pred ceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCeEEEEEeCC---cchhhHHhcCCCceeEEEEcCC
Q 014743 256 SIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNR---IDILDQALLRPGRIDRKIEFPN 332 (419)
Q Consensus 256 sVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~---~~~ld~allr~gRfd~~I~~~~ 332 (419)
|||||||||+++++|..... +....+++.++|.+||++....+++||+|||+ ++.++++++|+||||+.++++.
T Consensus 184 ~ilf~DEid~~~~~r~~~~~---~~~~~r~v~~lL~e~dg~~~~~~v~viaatN~~~~~~~i~~~~~r~~Rf~~~v~v~~ 260 (321)
T d1w44a_ 184 RVIVIDSLKNVIGAAGGNTT---SGGISRGAFDLLSDIGAMAASRGCVVIASLNPTSNDDKIVELVKEASRSNSTSLVIS 260 (321)
T ss_dssp SEEEEECCTTTC--------------CCHHHHHHHHHHHHHHHHHTCEEEEECCCCCCCHHHHHHHHHHHHHSCSEEEEE
T ss_pred cEEEeehhhhhccccccCCC---CCcchhhhhhhhhhccccccCCCeEEEEeCCCcccccchhhhhhccCcccceeecCC
Confidence 99999999999999854322 22334789999999999988889999999996 3567888899999999999999
Q ss_pred CCHHHHHHHHHHHHhhcccCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHh
Q 014743 333 PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 405 (419)
Q Consensus 333 P~~~~r~~Il~~~~~~~~~~~~~dl~~la~~t~G~sgadi~~l~~~A~~~a~~~~~~~vt~eD~~~Al~~v~~ 405 (419)
|+.++|.+||..+...+.. +++++.+.+.++...+.+..+..+.+.++..|++.++.
T Consensus 261 pd~~~r~~il~~~~~~~~~----------------~~~~l~~~~~~~a~la~~~~~~~~~~~~~~~Ai~~via 317 (321)
T d1w44a_ 261 TDVDGEWQVLTRTGEGLQR----------------LTHTLQTSYGEHSVLTIHTSKQSGGKQASGKAIQTVIK 317 (321)
T ss_dssp CSSTTEEEEEEECBTTCCE----------------EEEEEEEEECGGGCEEECCC------CEECHHHHHHHH
T ss_pred CChHHHHHHHHHhccCccc----------------cchhhhhccCHHHHHHHHhccccchhhhHHHHHHHHHc
Confidence 9999999998877655432 22333334444444444455566666777777777664
No 6
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=99.95 E-value=6.4e-28 Score=227.11 Aligned_cols=196 Identities=19% Similarity=0.258 Sum_probs=143.0
Q ss_pred ccccCcHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcchhhhhhchh-
Q 014743 161 DMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEG- 239 (419)
Q Consensus 161 ~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~~~~~g~~- 239 (419)
+.|+|..+.++.+.+......... +.....|++++|||||||||||++|++||++++.+|+.+++++.+..+.+..
T Consensus 9 ~~~i~~~~~i~~i~~~~~~~~~~~---~~~~~~p~~~vLL~GppGtGKT~la~alA~~~~~~~~~i~~~~~~~g~~~~~~ 85 (246)
T d1d2na_ 9 NGIIKWGDPVTRVLDDGELLVQQT---KNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAK 85 (246)
T ss_dssp TCCCCCSHHHHHHHHHHHHHHHHH---HHCSSCSEEEEEEECSTTSSHHHHHHHHHHHHTCSEEEEECGGGCTTCCHHHH
T ss_pred cCCcCcCHHHHHHHHHHHHHHHHH---hccCCCCCeEEEEECcCCCCHHHHHHHHhhcccccccccccccccccccccch
Confidence 568887777776666555432221 2223467889999999999999999999999999999999998877766654
Q ss_pred HHHHHHHHHHHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHcccccc-CCCeEEEEEeCCcchhhHHh
Q 014743 240 SRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEA-SNKIKVLMATNRIDILDQAL 318 (419)
Q Consensus 240 ~~~i~~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~-~~~v~VI~tTn~~~~ld~al 318 (419)
...++++|+.|+..+||||||||||++++.+...+ .... .++.+++..+++... ..+|+||+|||+++.+|++.
T Consensus 86 ~~~i~~if~~A~~~~p~il~iDEid~l~~~~~~~~--~~~~---~~~~~ll~~l~~~~~~~~~v~vi~tTn~~~~ld~~~ 160 (246)
T d1d2na_ 86 CQAMKKIFDDAYKSQLSCVVVDDIERLLDYVPIGP--RFSN---LVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEME 160 (246)
T ss_dssp HHHHHHHHHHHHTSSEEEEEECCHHHHTTCBTTTT--BCCH---HHHHHHHHHTTCCCSTTCEEEEEEEESCHHHHHHTT
T ss_pred hhhhhhhhhhhhhcccceeehhhhhhHhhhccccc--chhH---HHHHHHHHHhcCCCccccceeeeeccCChhhccchh
Confidence 46789999999999999999999999988764321 1222 344556666665543 34689999999999998865
Q ss_pred cCCCceeEEEEcCCCCHHHHHHHHHHHHhhcccCCCCCHHHHHHHcCCCC
Q 014743 319 LRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGAS 368 (419)
Q Consensus 319 lr~gRfd~~I~~~~P~~~~r~~Il~~~~~~~~~~~~~dl~~la~~t~G~s 368 (419)
++ +||+..|+||.+. +|.+|++.+.... ...+.++..++..+.|.+
T Consensus 161 ~~-~rF~~~i~~P~~~--~r~~il~~l~~~~-~~~~~~~~~i~~~~~g~~ 206 (246)
T d1d2na_ 161 ML-NAFSTTIHVPNIA--TGEQLLEALELLG-NFKDKERTTIAQQVKGKK 206 (246)
T ss_dssp CT-TTSSEEEECCCEE--EHHHHHHHHHHHT-CSCHHHHHHHHHHHTTSE
T ss_pred hc-CccceEEecCCch--hHHHHHHHHHhcc-CCChHHHHHHHHHcCCCc
Confidence 43 5999999986553 4445555443322 234556788888888865
No 7
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.94 E-value=1.9e-27 Score=231.00 Aligned_cols=180 Identities=24% Similarity=0.321 Sum_probs=139.5
Q ss_pred ccccCcHHHHHHHHHHhhcccCChhHHhhcC-CCCCCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcchh--hhhhc
Q 014743 161 DMIGGLDQQIKEIKEVIELPIKHPELFESLG-IAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV--QKYIG 237 (419)
Q Consensus 161 ~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~g-i~~p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~--~~~~g 237 (419)
+.|+||+++|+.|..+|..++++..+..... -.+|+++||+||||||||+|||+||+.++.++++++++++. ..|.|
T Consensus 14 ~~ViGQd~A~~~l~~av~~~~~r~~~~~~~~~~~~~~~iLl~GPpG~GKT~lAkalA~~~~~~~~~i~~s~~~~~~~~~~ 93 (309)
T d1ofha_ 14 QHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGK 93 (309)
T ss_dssp TTCCSCHHHHHHHHHHHHHHHHTTSSCHHHHHHCCCCCEEEECCTTSSHHHHHHHHHHHHTCCEEEEEGGGGSSCCSGGG
T ss_pred CcccChHHHHHHHHHHHHHHHHHhccCCCCccCCCCceEEEECCCCCCHHHHHHHHhhccccchhcccccccccceeEee
Confidence 4689999999999999965544433222111 13789999999999999999999999999999999999998 44789
Q ss_pred hhHHHHHHHHHHHHh-----hCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHcccccc--------CCCeEE
Q 014743 238 EGSRMVRELFVMARE-----HAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEA--------SNKIKV 304 (419)
Q Consensus 238 ~~~~~i~~lf~~a~~-----~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~--------~~~v~V 304 (419)
..+..++.+|..|+. .+||||||||||++++.+.+. ..+..-..++.++|..+++... ..++++
T Consensus 94 ~~~~~~~~~f~~a~~~~~~~~~~~IIf~DEIdki~~~~~~~---~~~~~~~gv~~~LL~~~dg~~~~~~~~~i~~s~ilf 170 (309)
T d1ofha_ 94 EVDSIIRDLTDSAGGAIDAVEQNGIVFIDEIDKICKKGEYS---GADVSREGVQRDLLPLVEGSTVSTKHGMVKTDHILF 170 (309)
T ss_dssp STTHHHHHHHHTTTTCHHHHHHHCEEEEECGGGGSCCSSCC---SSHHHHHHHHHHHHHHHHCCEEEETTEEEECTTCEE
T ss_pred eccccccccchhhhcccccccCCceEEehhhhhhhhhccCc---ccchhhhHHHHHhhHHhcCCEEecCCeEEEccceeE
Confidence 999999999998864 368999999999999876432 1222222345556666665321 235667
Q ss_pred EEE----eCCcchhhHHhcCCCceeEEEEcCCCCHHHHHHHHHHH
Q 014743 305 LMA----TNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIH 345 (419)
Q Consensus 305 I~t----Tn~~~~ld~allr~gRfd~~I~~~~P~~~~r~~Il~~~ 345 (419)
|++ +++++.++|++++ ||+..+.|++|+..++.+|+..+
T Consensus 171 i~~ga~~~~~~~~~~p~l~~--R~~~~i~~~~~~~~~~~~Il~~~ 213 (309)
T d1ofha_ 171 IASGAFQVARPSDLIPELQG--RLPIRVELTALSAADFERILTEP 213 (309)
T ss_dssp EEEECCSSSCGGGSCHHHHH--TCCEEEECCCCCHHHHHHHHHSS
T ss_pred EeccchhhcCcccchhhhhh--hhheeeeccCCCHHHHHHHHHHH
Confidence 766 5788999999986 99999999999999999998653
No 8
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=99.92 E-value=7.8e-24 Score=196.54 Aligned_cols=218 Identities=18% Similarity=0.201 Sum_probs=167.4
Q ss_pred CCCCCcccccCcHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcchhhh
Q 014743 155 VPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK 234 (419)
Q Consensus 155 ~p~~~~~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~~~ 234 (419)
.+|.+|++|+|+++++++|..++..+.. +-.++.++|||||||||||++|+++|++++.+++.+++++....
T Consensus 3 ~RP~~~~divGqe~~~~~l~~~i~~~~~--------~~~~~~~~L~~GPpGtGKT~lA~~la~~~~~~~~~~~~~~~~~~ 74 (238)
T d1in4a2 3 LRPKSLDEFIGQENVKKKLSLALEAAKM--------RGEVLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVLVKQ 74 (238)
T ss_dssp TSCSSGGGCCSCHHHHHHHHHHHHHHHH--------HTCCCCCEEEESSTTSSHHHHHHHHHHHHTCCEEEEETTTCCSH
T ss_pred CCCCcHHHcCChHHHHHHHHHHHHHHHh--------cCCCCCeEEEECCCCCcHHHHHHHHHhccCCCcccccCcccccH
Confidence 3466899999999999999999976421 12456789999999999999999999999999999988776432
Q ss_pred hhchhHHHHHHHHHHHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHcccc-------------ccCCC
Q 014743 235 YIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGF-------------EASNK 301 (419)
Q Consensus 235 ~~g~~~~~i~~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~-------------~~~~~ 301 (419)
..+...+.. ....+++|+||+|.+. ...+..+...+...... ....+
T Consensus 75 ------~~~~~~~~~--~~~~~~~~ide~~~~~------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (238)
T d1in4a2 75 ------GDMAAILTS--LERGDVLFIDEIHRLN------------KAVEELLYSAIEDFQIDIMIGKGPSAKSIRIDIQP 134 (238)
T ss_dssp ------HHHHHHHHH--CCTTCEEEEETGGGCC------------HHHHHHHHHHHHTSCCCC---------------CC
T ss_pred ------HHHHHHHHh--hccCCchHHHHHHHhh------------hHHHhhcccceeeeeeeeeecCcccccccccCCCC
Confidence 233333332 3456899999999963 33445555555432110 12347
Q ss_pred eEEEEEeCCcchhhHHhcCCCceeEEEEcCCCCHHHHHHHHHHHHhhcccCCC-CCHHHHHHHcCCCCHHHHHHHHHHHH
Q 014743 302 IKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRG-IDLKKIAEKMNGASGAELKAVCTEAG 380 (419)
Q Consensus 302 v~VI~tTn~~~~ld~allr~gRfd~~I~~~~P~~~~r~~Il~~~~~~~~~~~~-~dl~~la~~t~G~sgadi~~l~~~A~ 380 (419)
+++|++||++..+++.+++ ||+..+.|++|+..++..+++.........-+ ..+..++..+.| +++++.++++.+.
T Consensus 135 ~~~I~at~~~~~~~~~~~~--r~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~i~~~s~g-d~R~ai~~l~~~~ 211 (238)
T d1in4a2 135 FTLVGATTRSGLLSSPLRS--RFGIILELDFYTVKELKEIIKRAASLMDVEIEDAAAEMIAKRSRG-TPRIAIRLTKRVR 211 (238)
T ss_dssp CEEEEEESCGGGSCHHHHT--TCSEEEECCCCCHHHHHHHHHHHHHHTTCCBCHHHHHHHHHTSTT-CHHHHHHHHHHHH
T ss_pred eEEEEecCCCcccccccee--eeeEEEEecCCCHHHHHHHHHHhhhhccchhhHHHHHHHHHhCCC-CHHHHHHHHHHHH
Confidence 8999999999999999999 99999999999999999999987776554333 237778888777 7888889999888
Q ss_pred HHHHHhcCCCCCHHHHHHHHHHH
Q 014743 381 MFALRERRIHVTQEDFEMAVAKV 403 (419)
Q Consensus 381 ~~a~~~~~~~vt~eD~~~Al~~v 403 (419)
..+.......+|.+++..|+..+
T Consensus 212 ~~~~~~~~~~it~~~~~~al~~l 234 (238)
T d1in4a2 212 DMLTVVKADRINTDIVLKTMEVL 234 (238)
T ss_dssp HHHHHHTCSSBCHHHHHHHHHHH
T ss_pred HHHHHhcCCccCHHHHHHHHHhh
Confidence 77777777789999999998754
No 9
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=99.90 E-value=1e-22 Score=189.25 Aligned_cols=219 Identities=20% Similarity=0.253 Sum_probs=163.2
Q ss_pred CCCCCcccccCcHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcchhhh
Q 014743 155 VPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK 234 (419)
Q Consensus 155 ~p~~~~~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~~~ 234 (419)
.+|.+|++|+|+++++++|..++..+.. +-.++.++|||||||||||++|+++|++++.++..++++.....
T Consensus 3 ~RP~~~ddivGq~~~~~~L~~~i~~~~~--------~~~~~~~~Ll~GPpG~GKTtla~~la~~~~~~~~~~~~~~~~~~ 74 (239)
T d1ixsb2 3 LRPKTLDEYIGQERLKQKLRVYLEAAKA--------RKEPLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEKP 74 (239)
T ss_dssp CCCCSGGGSCSCHHHHHHHHHHHHHHTT--------SSSCCCCEEEECCTTSCHHHHHHHHHHHHTCCEEEEETTTCCSH
T ss_pred cCCCCHHHhCCHHHHHHHHHHHHHHHHh--------cCCCCCeEEEECCCCCCHHHHHHHHHHHhCCCeEeccCCccccc
Confidence 4577899999999999999999876422 22457889999999999999999999999999999998775432
Q ss_pred hhchhHHHHHHHHHHHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHc--cc-----------cccCCC
Q 014743 235 YIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQL--DG-----------FEASNK 301 (419)
Q Consensus 235 ~~g~~~~~i~~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l--~~-----------~~~~~~ 301 (419)
+.....+.. . ....+|+||||+|.+. ...+..+...+... +. .....+
T Consensus 75 --~~~~~~~~~----~-~~~~~i~~iDe~~~~~------------~~~~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 135 (239)
T d1ixsb2 75 --GDLAAILAN----S-LEEGDILFIDEIHRLS------------RQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPR 135 (239)
T ss_dssp --HHHHHHHHT----T-CCTTCEEEEETGGGCC------------HHHHHHHHHHHHHSEEEEECSCTTCCCEEEEECCC
T ss_pred --hhhHHHHHh----h-ccCCCeeeeecccccc------------hhHHHhhhhhhhhhhhhhhhccchhhhhcccCCCC
Confidence 111111111 1 1235799999999953 34455555555432 11 112346
Q ss_pred eEEEEEeCCcchhhHHhcCCCceeEEEEcCCCCHHHHHHHHHHHHhhcccCCC-CCHHHHHHHcCCCCHHHHHHHHHHHH
Q 014743 302 IKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRG-IDLKKIAEKMNGASGAELKAVCTEAG 380 (419)
Q Consensus 302 v~VI~tTn~~~~ld~allr~gRfd~~I~~~~P~~~~r~~Il~~~~~~~~~~~~-~dl~~la~~t~G~sgadi~~l~~~A~ 380 (419)
+++|++||++...++..++ |+...+.|..|+.+++..|+.......++.-+ ..+..++..+.| +.++..++++.+.
T Consensus 136 ~~~i~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~l~~ia~~s~g-d~R~a~~~l~~~~ 212 (239)
T d1ixsb2 136 FTLIGATTRPGLITAPLLS--RFGIVEHLEYYTPEELAQGVMRDARLLGVRITEEAALEIGRRSRG-TMRVAKRLFRRVR 212 (239)
T ss_dssp CEEEEEESCCSSCSCGGGG--GCSEEEECCCCCHHHHHHHHHHHHGGGCCCBCHHHHHHHHHHTTS-SHHHHHHHHHHHH
T ss_pred EEEEeeccCcccccchhhc--ccceeeEeeccChhhhhHHHHHHHHHhCCccchHHHHHHHHHcCC-CHHHHHHHHHHHH
Confidence 7889999999988888888 88889999999999999999987776554322 246788999988 6677778888877
Q ss_pred HHHHHhcCCCCCHHHHHHHHHHH
Q 014743 381 MFALRERRIHVTQEDFEMAVAKV 403 (419)
Q Consensus 381 ~~a~~~~~~~vt~eD~~~Al~~v 403 (419)
..+...+...||.+++.+++..+
T Consensus 213 ~~a~~~~~~~It~~~~~~~l~~l 235 (239)
T d1ixsb2 213 DFAQVAGEEVITRERALEALAAL 235 (239)
T ss_dssp HHHTTSCCSCBCHHHHHHHHHHH
T ss_pred HHHHHhCCCCcCHHHHHHHHhhh
Confidence 77766677889999999998643
No 10
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.85 E-value=4.2e-21 Score=186.40 Aligned_cols=194 Identities=19% Similarity=0.302 Sum_probs=144.8
Q ss_pred ccccCcHHHHHHHHHHhhcccCChhHHhhcCC----CCCCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcchhhh--
Q 014743 161 DMIGGLDQQIKEIKEVIELPIKHPELFESLGI----AQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-- 234 (419)
Q Consensus 161 ~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi----~~p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~~~-- 234 (419)
..|+||+++++.|..+|... ..|+ .|...+||+||||||||.||++||..++.+|++++|+++...
T Consensus 22 ~~viGQ~~a~~~v~~~v~~~--------~~~l~~~~~p~~~~lf~Gp~GvGKT~lak~la~~l~~~~i~~d~s~~~~~~~ 93 (315)
T d1r6bx3 22 MLVFGQDKAIEALTEAIKMA--------RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHT 93 (315)
T ss_dssp TTSCSCHHHHHHHHHHHHHH--------HTTCSCTTSCSEEEEEECSTTSSHHHHHHHHHHHHTCEEEEEEGGGCSSSSC
T ss_pred CeecChHHHHHHHHHHHHHH--------HccCCCCCCCceEEEEECCCcchhHHHHHHHHhhccCCeeEeccccccchhh
Confidence 68999999999999998643 2222 233368999999999999999999999999999999988532
Q ss_pred ----------hhchhHHHHHHHHHHHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHcccccc------
Q 014743 235 ----------YIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEA------ 298 (419)
Q Consensus 235 ----------~~g~~~~~i~~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~------ 298 (419)
|+|..++. .+....+.++++|++|||+|+ .++++++.++++++...-.+.
T Consensus 94 ~~~l~g~~~gy~g~~~~~--~l~~~~~~~~~~vvl~DeieK------------a~~~V~~~lLqild~G~ltd~~Gr~vd 159 (315)
T d1r6bx3 94 VSRLIGAPPGYVGFDQGG--LLTDAVIKHPHAVLLLDEIEK------------AHPDVFNILLQVMDNGTLTDNNGRKAD 159 (315)
T ss_dssp CSSSCCCCSCSHHHHHTT--HHHHHHHHCSSEEEEEETGGG------------SCHHHHHHHHHHHHHSEEEETTTEEEE
T ss_pred hhhhcccCCCccccccCC--hhhHHHHhCccchhhhccccc------------ccchHhhhhHHhhccceecCCCCCccC
Confidence 44444333 455667788889999999999 788999999999987543322
Q ss_pred CCCeEEEEEeCCc-------------------------chhhHHhcCCCceeEEEEcCCCCHHHHHHHHHHHHhhcc---
Q 014743 299 SNKIKVLMATNRI-------------------------DILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMN--- 350 (419)
Q Consensus 299 ~~~v~VI~tTn~~-------------------------~~ld~allr~gRfd~~I~~~~P~~~~r~~Il~~~~~~~~--- 350 (419)
..++++|+|||.. ..+.|+|++ |||.++.|.+.+.++..+|+...+..+.
T Consensus 160 f~n~iiI~Tsnig~~~i~~~~~~~~~~~~~~~~~~~l~~~f~pEfln--Rid~ii~f~~l~~~~~~~I~~~~l~~~~~~l 237 (315)
T d1r6bx3 160 FRNVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRN--RLDNIIWFDHLSTDVIHQVVDKFIVELQVQL 237 (315)
T ss_dssp CTTEEEEEEECSSCC-----------------CHHHHHHHSCHHHHT--TCSEEEECCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEeccchhhHHHHhhhccchhhhhhHhHHHHHHHhcCHHHHh--hhhhhhcccchhhhHHHHHHHHHHHHHHHHH
Confidence 3489999999954 246789998 9999999999999999999876654421
Q ss_pred ----cC---CCCCHHHHHHH--cCCCCHHHHHHHHHH
Q 014743 351 ----LM---RGIDLKKIAEK--MNGASGAELKAVCTE 378 (419)
Q Consensus 351 ----~~---~~~dl~~la~~--t~G~sgadi~~l~~~ 378 (419)
.. .+--+..|+.. ...+.++.|+.++++
T Consensus 238 ~~~~i~l~~~~~a~~~l~~~~yd~~~GaR~L~r~Ie~ 274 (315)
T d1r6bx3 238 DQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQD 274 (315)
T ss_dssp HHTTEEEEECHHHHHHHHHHHCBTTTBTTTHHHHHHH
T ss_pred HhcCcchhhHHHHHHHHHHhCCCCCCChhhHHHHHHH
Confidence 11 11113445543 335556777766654
No 11
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=99.84 E-value=1.6e-20 Score=173.35 Aligned_cols=208 Identities=21% Similarity=0.257 Sum_probs=149.5
Q ss_pred cccccCCCCCcccccCcHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhccC-----CceE
Q 014743 150 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD-----CTFI 224 (419)
Q Consensus 150 ~~~~~~p~~~~~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~~-----~~~i 224 (419)
.|.+++.|.+|+||+|++++++.|..++... ...++||+||||||||++|+++|+++. ..++
T Consensus 13 ~w~~ky~P~~~~diig~~~~~~~l~~~i~~~-------------~~~~lll~Gp~G~GKTtla~~iak~l~~~~~~~~~~ 79 (231)
T d1iqpa2 13 PWVEKYRPQRLDDIVGQEHIVKRLKHYVKTG-------------SMPHLLFAGPPGVGKTTAALALARELFGENWRHNFL 79 (231)
T ss_dssp CHHHHTCCCSTTTCCSCHHHHHHHHHHHHHT-------------CCCEEEEESCTTSSHHHHHHHHHHHHHGGGHHHHEE
T ss_pred hHHHHhCCCCHHHccCcHHHHHHHHHHHHcC-------------CCCeEEEECCCCCcHHHHHHHHHHHHHhcccCCCee
Confidence 4678888899999999999999999998652 345799999999999999999998763 4688
Q ss_pred EEeCcchhhhhhchhHHHHHHHHH--HHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCe
Q 014743 225 RVSGSELVQKYIGEGSRMVRELFV--MAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKI 302 (419)
Q Consensus 225 ~v~~s~l~~~~~g~~~~~i~~lf~--~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v 302 (419)
.+++++....... ......... ......+.|+++||+|.+ ....+..+..++... ..++
T Consensus 80 e~n~s~~~~~~~~--~~~~~~~~~~~~~~~~~~~iilide~d~~------------~~~~~~~ll~~l~~~-----~~~~ 140 (231)
T d1iqpa2 80 ELNASDERGINVI--REKVKEFARTKPIGGASFKIIFLDEADAL------------TQDAQQALRRTMEMF-----SSNV 140 (231)
T ss_dssp EEETTCHHHHHTT--HHHHHHHHHSCCGGGCSCEEEEEETGGGS------------CHHHHHHHHHHHHHT-----TTTE
T ss_pred EEecCcccchhHH--HHHHHHHHhhhhccCCCceEEeehhhhhc------------chhHHHHHhhhcccC-----Ccce
Confidence 8888765432111 111111111 112335679999999985 344566666666543 4578
Q ss_pred EEEEEeCCcchhhHHhcCCCceeEEEEcCCCCHHHHHHHHHHHHhhcccC-CCCCHHHHHHHcCCCCHHHHHHHHHHHHH
Q 014743 303 KVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLM-RGIDLKKIAEKMNGASGAELKAVCTEAGM 381 (419)
Q Consensus 303 ~VI~tTn~~~~ld~allr~gRfd~~I~~~~P~~~~r~~Il~~~~~~~~~~-~~~dl~~la~~t~G~sgadi~~l~~~A~~ 381 (419)
.+|++||..+.+++++.+ |+. .+.|++|+..+...+++..+...++. ++-.+..+++.+.| +.+++-.+++.+.
T Consensus 141 ~~i~~~n~~~~i~~~l~s--R~~-~i~~~~~~~~~~~~~l~~~~~~e~i~i~~~~l~~I~~~~~g-diR~ai~~Lq~~~- 215 (231)
T d1iqpa2 141 RFILSCNYSSKIIEPIQS--RCA-IFRFRPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEG-DMRRAINILQAAA- 215 (231)
T ss_dssp EEEEEESCGGGSCHHHHH--TEE-EEECCCCCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHHTT-CHHHHHHHHHHHH-
T ss_pred EEEeccCChhhchHhHhC--ccc-cccccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHHcCC-CHHHHHHHHHHHH-
Confidence 899999999999999998 885 69999999999999999888765542 33347888888877 5555555554432
Q ss_pred HHHHhcCCCCCHHHHHH
Q 014743 382 FALRERRIHVTQEDFEM 398 (419)
Q Consensus 382 ~a~~~~~~~vt~eD~~~ 398 (419)
.....++.+++..
T Consensus 216 ----~~~~~it~e~v~~ 228 (231)
T d1iqpa2 216 ----ALDKKITDENVFM 228 (231)
T ss_dssp ----TTCSEECHHHHHH
T ss_pred ----HcCCCcCHHHHHh
Confidence 2345677776643
No 12
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.84 E-value=5.6e-21 Score=175.76 Aligned_cols=217 Identities=18% Similarity=0.168 Sum_probs=149.7
Q ss_pred cccccCCCCCcccccCcHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhccCC-----ceE
Q 014743 150 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDC-----TFI 224 (419)
Q Consensus 150 ~~~~~~p~~~~~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~~~-----~~i 224 (419)
.|++++.|.+|+||+|++++++.|..++... ...++|||||||||||++|+++|+++.. .++
T Consensus 3 pw~ekyrP~~~~divg~~~~~~~L~~~i~~~-------------~~~~lLl~Gp~G~GKttl~~~la~~l~~~~~~~~~~ 69 (227)
T d1sxjc2 3 PWVEKYRPETLDEVYGQNEVITTVRKFVDEG-------------KLPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVL 69 (227)
T ss_dssp CHHHHTCCSSGGGCCSCHHHHHHHHHHHHTT-------------CCCCEEEECSSSSSHHHHHHHHHHHHHTTSHHHHEE
T ss_pred chhhhhCCCCHHHccCcHHHHHHHHHHHHcC-------------CCCeEEEECCCCCChhHHHHHHHHHhhcCCCcceeE
Confidence 4778889999999999999999999998652 2335999999999999999999998643 356
Q ss_pred EEeCcchhhhhhchhHHHHHHHHHHHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCeEE
Q 014743 225 RVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKV 304 (419)
Q Consensus 225 ~v~~s~l~~~~~g~~~~~i~~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~V 304 (419)
.++.++..+.............+.........||+|||+|.+ ....++.+...+... ..++++
T Consensus 70 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kiiiiDe~d~~------------~~~~~~~Ll~~le~~-----~~~~~~ 132 (227)
T d1sxjc2 70 ELNASDDRGIDVVRNQIKDFASTRQIFSKGFKLIILDEADAM------------TNAAQNALRRVIERY-----TKNTRF 132 (227)
T ss_dssp EECTTSCCSHHHHHTHHHHHHHBCCSSSCSCEEEEETTGGGS------------CHHHHHHHHHHHHHT-----TTTEEE
T ss_pred EecccccCCeeeeecchhhccccccccCCCeEEEEEeccccc------------hhhHHHHHHHHhhhc-----ccceee
Confidence 666665443322111111000000111223459999999985 345667777777654 457889
Q ss_pred EEEeCCcchhhHHhcCCCceeEEEEcCCCCHHHHHHHHHHHHhhcccC-CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHH
Q 014743 305 LMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLM-RGIDLKKIAEKMNGASGAELKAVCTEAGMFA 383 (419)
Q Consensus 305 I~tTn~~~~ld~allr~gRfd~~I~~~~P~~~~r~~Il~~~~~~~~~~-~~~dl~~la~~t~G~sgadi~~l~~~A~~~a 383 (419)
+++||.+..+++.+++ |+ ..+.|++|+..+...++...+..-++. ++..+..|++.+.| +.+..-++++.+...+
T Consensus 133 ~~~~~~~~~i~~~i~s--r~-~~i~~~~~~~~~i~~~l~~I~~~e~i~i~~~~l~~i~~~s~G-d~R~ain~Lq~~~~~~ 208 (227)
T d1sxjc2 133 CVLANYAHKLTPALLS--QC-TRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNG-DMRRVLNVLQSCKATL 208 (227)
T ss_dssp EEEESCGGGSCHHHHT--TS-EEEECCCCCHHHHHHHHHHHHHTTTCCBCHHHHHHHHHHHTT-CHHHHHHHTTTTTTTT
T ss_pred ccccCcHHHhHHHHHH--HH-hhhccccccccccccccccccccccccCCHHHHHHHHHHcCC-cHHHHHHHHHHHHHhc
Confidence 9999999999999998 76 478999999999999998766554332 33347888999887 4444444444433333
Q ss_pred HHhcCCCCCHHHHHHHH
Q 014743 384 LRERRIHVTQEDFEMAV 400 (419)
Q Consensus 384 ~~~~~~~vt~eD~~~Al 400 (419)
.......|+.+++.+++
T Consensus 209 ~~~~~~~It~~~v~e~~ 225 (227)
T d1sxjc2 209 DNPDEDEISDDVIYECC 225 (227)
T ss_dssp CSSSCCCBCHHHHHHHT
T ss_pred CCCCCCeeCHHHHHHHh
Confidence 23345678998887764
No 13
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.82 E-value=4e-20 Score=172.27 Aligned_cols=227 Identities=16% Similarity=0.231 Sum_probs=146.1
Q ss_pred cccccCCCCCcccccCcHHHHHHHHHHhhcccCCh-h---HHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhccCCceEE
Q 014743 150 MKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHP-E---LFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIR 225 (419)
Q Consensus 150 ~~~~~~p~~~~~~I~G~~~~~~~l~~~i~~~l~~~-~---~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~~~~~i~ 225 (419)
+|++++.|.+|++|+|+++.+++|.+++....... . .....+.....++|||||||||||++|+++|++++..++.
T Consensus 3 lW~eky~P~~~~dlig~~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~lll~GPpG~GKTt~a~~la~~~~~~~~~ 82 (253)
T d1sxja2 3 LWTVKYAPTNLQQVCGNKGSVMKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYDILE 82 (253)
T ss_dssp CHHHHTCCSSGGGCCSCHHHHHHHHHHHHTHHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHHHHHHHHTTCEEEE
T ss_pred ccccCcCCCCHHHhcCCHHHHHHHHHHHHhhhhcchhhhhhhcccCCCCCceEEEECCCCCCHHHHHHHHHHHHHhhhhc
Confidence 57888999999999999999999999986421110 0 1123344566789999999999999999999999999999
Q ss_pred EeCcchhhhhhchhHH--HH-----HHHH-----HHHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHc
Q 014743 226 VSGSELVQKYIGEGSR--MV-----RELF-----VMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQL 293 (419)
Q Consensus 226 v~~s~l~~~~~g~~~~--~i-----~~lf-----~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l 293 (419)
+++++..+.+.....- .+ ...+ .......+.++++||+|.+.... ......+.++....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~ide~~~~~~~~---------~~~~~~~~~~~~~~ 153 (253)
T d1sxja2 83 QNASDVRSKTLLNAGVKNALDNMSVVGYFKHNEEAQNLNGKHFVIIMDEVDGMSGGD---------RGGVGQLAQFCRKT 153 (253)
T ss_dssp ECTTSCCCHHHHHHTGGGGTTBCCSTTTTTC----CCSSTTSEEEEECSGGGCCTTS---------TTHHHHHHHHHHHC
T ss_pred cccccchhhHHHHHHHHHHhhcchhhhhhhhhhhcccccccceEEEeeeccccccch---------hhhhHHHhhhhccc
Confidence 9998776543221100 00 0000 00112346799999999974321 12223333333221
Q ss_pred cccccCCCeEEEEEeCCcchhhHHhcCCCceeEEEEcCCCCHHHHHHHHHHHHhh--cccCCCCCHHHHHHHcCCCCHHH
Q 014743 294 DGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRR--MNLMRGIDLKKIAEKMNGASGAE 371 (419)
Q Consensus 294 ~~~~~~~~v~VI~tTn~~~~ld~allr~gRfd~~I~~~~P~~~~r~~Il~~~~~~--~~~~~~~dl~~la~~t~G~sgad 371 (419)
...++++++++....+++ ++ |+...|.|++|+.+++..+++..+.. +.+.+ -.+..|+..+.| |
T Consensus 154 -----~~~ii~i~~~~~~~~~~~--l~--~~~~~i~f~~~~~~~i~~~l~~i~~~e~i~i~~-~~l~~i~~~s~G----D 219 (253)
T d1sxja2 154 -----STPLILICNERNLPKMRP--FD--RVCLDIQFRRPDANSIKSRLMTIAIREKFKLDP-NVIDRLIQTTRG----D 219 (253)
T ss_dssp -----SSCEEEEESCTTSSTTGG--GT--TTSEEEECCCCCHHHHHHHHHHHHHHHTCCCCT-THHHHHHHHTTT----C
T ss_pred -----cccccccccccccccccc--cc--ceeeeeeccccchhHHHHHHHHHHHHhCCCCCH-HHHHHHHHhCCC----c
Confidence 234444444445455553 34 56789999999999999999987754 44433 358889998876 7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCHHHHHHHHH
Q 014743 372 LKAVCTEAGMFALRERRIHVTQEDFEMAVA 401 (419)
Q Consensus 372 i~~l~~~A~~~a~~~~~~~vt~eD~~~Al~ 401 (419)
|+.++..- .+.......++.+++.+...
T Consensus 220 iR~ai~~L--~~~~~~~~~i~~~~~~~~~~ 247 (253)
T d1sxja2 220 IRQVINLL--STISTTTKTINHENINEISK 247 (253)
T ss_dssp HHHHHHHH--THHHHHSSCCCTTHHHHHHH
T ss_pred HHHHHHHH--HHHHHcCCCCCHHHHHHHhc
Confidence 76655432 22223455677788765543
No 14
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=99.82 E-value=8.5e-19 Score=163.35 Aligned_cols=222 Identities=17% Similarity=0.209 Sum_probs=152.0
Q ss_pred ccccCcHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhcc----CCceEEEeCcchhhh--
Q 014743 161 DMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT----DCTFIRVSGSELVQK-- 234 (419)
Q Consensus 161 ~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~----~~~~i~v~~s~l~~~-- 234 (419)
+.++|.+.+++.|.++|...+.+|. .+|.++||+||||||||++++++++.+ +..++.+++......
T Consensus 16 ~~l~~Re~ei~~l~~~l~~~l~~~~-------~~~~~lll~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 88 (276)
T d1fnna2 16 KRLPHREQQLQQLDILLGNWLRNPG-------HHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRNFTA 88 (276)
T ss_dssp SCCTTCHHHHHHHHHHHHHHHHSTT-------SSCCEEEEECCTTSSHHHHHHHHHHHHTTSCCCEEEEEETTTCCSHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHhCCC-------CCCCceEEECCCCCCHHHHHHHHHHHHhcccCCcEEEecchhhhhhhh
Confidence 6789999999999999976554443 567899999999999999999999876 455677766543211
Q ss_pred --------------hhchhH-HHHHHHHHHHH-hhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHcccccc
Q 014743 235 --------------YIGEGS-RMVRELFVMAR-EHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEA 298 (419)
Q Consensus 235 --------------~~g~~~-~~i~~lf~~a~-~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~ 298 (419)
+.+... .....+..... ...+.++++|++|.+. ......+..++..+.. ..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~------------~~~~~~~~~~~~~~~~-~~ 155 (276)
T d1fnna2 89 IIGEIARSLNIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLA------------PDILSTFIRLGQEADK-LG 155 (276)
T ss_dssp HHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHTTCCEEEEEETGGGSC------------HHHHHHHHHHTTCHHH-HS
T ss_pred hhhhhHHhhhhhhhhhccchhHHHHHHHHHHhhcccccccchhHHHHhh------------hhhhhhHHHHHhcccc-cc
Confidence 111111 12233333333 3456788899988852 2233333333322211 13
Q ss_pred CCCeEEEEEeCCcc---hhhHHhcCCCce-eEEEEcCCCCHHHHHHHHHHHHhhcccCCCCC---HHHHHHHcC------
Q 014743 299 SNKIKVLMATNRID---ILDQALLRPGRI-DRKIEFPNPNEESRLDILKIHSRRMNLMRGID---LKKIAEKMN------ 365 (419)
Q Consensus 299 ~~~v~VI~tTn~~~---~ld~allr~gRf-d~~I~~~~P~~~~r~~Il~~~~~~~~~~~~~d---l~~la~~t~------ 365 (419)
...+.+|++++... .+++.+.+ |+ ...|.|++|+.+++.+|++.++........++ +..++..+.
T Consensus 156 ~~~~~~i~~~~~~~~~~~~~~~~~~--r~~~~~i~~~~~~~~e~~~il~~r~~~~~~~~~~~~~~l~~ia~~~~~~~~~~ 233 (276)
T d1fnna2 156 AFRIALVIVGHNDAVLNNLDPSTRG--IMGKYVIRFSPYTKDQIFDILLDRAKAGLAEGSYSEDILQMIADITGAQTPLD 233 (276)
T ss_dssp SCCEEEEEEESSTHHHHTSCHHHHH--HHTTCEEECCCCBHHHHHHHHHHHHHHHBCTTSSCHHHHHHHHHHHSBSSTTC
T ss_pred ccceEEeecCCchhhhhhcchhhhh--hhcchhccccchhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhhhh
Confidence 45688888888754 45677765 54 45789999999999999998776543322222 555666652
Q ss_pred --CCCHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Q 014743 366 --GASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVM 404 (419)
Q Consensus 366 --G~sgadi~~l~~~A~~~a~~~~~~~vt~eD~~~Al~~v~ 404 (419)
+-+++.+..+|+.|...|..+++..|+.+|++.|.++++
T Consensus 234 ~~~G~~R~a~~ll~~a~~~A~~~~~~~I~~edv~~A~~~~~ 274 (276)
T d1fnna2 234 TNRGDARLAIDILYRSAYAAQQNGRKHIAPEDVRKSSKEVL 274 (276)
T ss_dssp TTSCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHS
T ss_pred hcCCCHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHh
Confidence 125678889999999999999999999999999999875
No 15
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.81 E-value=3.1e-20 Score=180.10 Aligned_cols=197 Identities=22% Similarity=0.350 Sum_probs=142.5
Q ss_pred ccccCcHHHHHHHHHHhhcccCChhHHhhcCC---CCCC-eEEEEcCCCChHHHHHHHHHhcc---CCceEEEeCcchhh
Q 014743 161 DMIGGLDQQIKEIKEVIELPIKHPELFESLGI---AQPK-GVLLYGPPGTGKTLLARAVAHHT---DCTFIRVSGSELVQ 233 (419)
Q Consensus 161 ~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi---~~p~-~iLL~GPpGtGKT~LakalA~~~---~~~~i~v~~s~l~~ 233 (419)
..|+||+++++.|.+.|... ..|+ ..|. .+||+||||||||.+|++||..+ +.++++++++++..
T Consensus 23 ~~v~GQ~~ai~~v~~~i~~~--------~~~l~~~~kp~~~~lf~Gp~G~GKt~lak~la~~l~~~~~~~~~~~~~~~~~ 94 (315)
T d1qvra3 23 KRVVGQDEAIRAVADAIRRA--------RAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYME 94 (315)
T ss_dssp HHSCSCHHHHHHHHHHHHHH--------GGGCSCSSSCSEEEEEBSCSSSSHHHHHHHHHHHHHSSGGGEEEECTTTCCS
T ss_pred CeEeCHHHHHHHHHHHHHHH--------hcCCCCCCCCceEEEEECCCcchHHHHHHHHHHHhcCCCcceEEEecccccc
Confidence 57999999999999988753 1222 2233 57889999999999999999987 67899999998753
Q ss_pred h------------hhchhHHHHHHHHHHHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHcccccc---
Q 014743 234 K------------YIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEA--- 298 (419)
Q Consensus 234 ~------------~~g~~~~~i~~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~--- 298 (419)
. |+|+.++ ..+.+..+.++.+||||||||+ .++.+++.++++++...-.+.
T Consensus 95 ~~~~~~L~g~~~gyvG~~~~--~~l~~~~~~~p~~Vvl~DEieK------------~~~~v~~~ll~~l~~g~~~~~~gr 160 (315)
T d1qvra3 95 KHAVSRLIGAPPGYVGYEEG--GQLTEAVRRRPYSVILFDEIEK------------AHPDVFNILLQILDDGRLTDSHGR 160 (315)
T ss_dssp SGGGGGC----------------CHHHHHHHCSSEEEEESSGGG------------SCHHHHHHHHHHHTTTEECCSSSC
T ss_pred chhhhhhcCCCCCCcCcccC--ChHHHHHHhCCCcEEEEehHhh------------cCHHHHHHHHHHhccCceeCCCCc
Confidence 2 3443332 2466777788889999999999 788999999999987533222
Q ss_pred ---CCCeEEEEEeCCc--------------------------chhhHHhcCCCceeEEEEcCCCCHHHHHHHHHHHHhhc
Q 014743 299 ---SNKIKVLMATNRI--------------------------DILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRM 349 (419)
Q Consensus 299 ---~~~v~VI~tTn~~--------------------------~~ld~allr~gRfd~~I~~~~P~~~~r~~Il~~~~~~~ 349 (419)
..++++|+|||-. +.+.|+|++ |||.++.|.+.+.++..+|+...+..+
T Consensus 161 ~v~~~~~i~i~tsnlG~~~i~~~~~~~~~~~~~~~~~~~~l~~~f~pEfln--Rid~Ii~F~~L~~~~~~~I~~~~l~~l 238 (315)
T d1qvra3 161 TVDFRNTVIILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLN--RLDEIVVFRPLTKEQIRQIVEIQLSYL 238 (315)
T ss_dssp CEECTTEEEEEECCTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTSCHHHHH--TCSBCCBCCCCCHHHHHHHHHHHHHHH
T ss_pred EecCcceEEEEecccChHHHhhhcccccchhhhhHHHHHHHHhhcCHHHHh--cCCeeeeccchhhhhhHHHHHHHHHHH
Confidence 2479999999964 236789998 999999999999999999987655432
Q ss_pred c-------cC---CCCCHHHHHHH--cCCCCHHHHHHHHHHHHH
Q 014743 350 N-------LM---RGIDLKKIAEK--MNGASGAELKAVCTEAGM 381 (419)
Q Consensus 350 ~-------~~---~~~dl~~la~~--t~G~sgadi~~l~~~A~~ 381 (419)
. +. .+.....|++. ...|.++.|+.++++...
T Consensus 239 ~~rl~~~~i~l~i~~~~~~~L~~~~y~~~~GAR~L~r~Ie~~i~ 282 (315)
T d1qvra3 239 RARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELE 282 (315)
T ss_dssp HHHHHTTTCEEEECHHHHHHHHHHHCBTTTBTSTHHHHHHHHTH
T ss_pred HHHHHhccccccccHHHHHHHHHhCCCCCCCcchHHHHHHHHHH
Confidence 1 11 11124456665 345666777777765443
No 16
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.81 E-value=3.7e-19 Score=165.55 Aligned_cols=205 Identities=18% Similarity=0.247 Sum_probs=147.3
Q ss_pred ccCCCCCcccccCcHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhccCCc----------
Q 014743 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT---------- 222 (419)
Q Consensus 153 ~~~p~~~~~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~~~~---------- 222 (419)
+++.|.+|+|++|++++++.+..++... ..|..+|||||||||||++|+++++++...
T Consensus 4 ~KyrP~~~~dlig~~~~~~~L~~~i~~~------------~~~~~~Ll~Gp~G~GKtt~a~~~~~~l~~~~~~~~~~~~~ 71 (239)
T d1njfa_ 4 RKWRPQTFADVVGQEHVLTALANGLSLG------------RIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGV 71 (239)
T ss_dssp HHTCCSSGGGSCSCHHHHHHHHHHHHTT------------CCCSEEEEECSTTSSHHHHHHHHHHHHHCTTCSCSSCCSC
T ss_pred hhhCCCCHHHccChHHHHHHHHHHHHcC------------CCCeeEEEECCCCCcHHHHHHHHHHHhcCccccccCcccc
Confidence 4677889999999999999999998753 457789999999999999999999865322
Q ss_pred --------------eEEEeCcchhhhhhchhHHHHHHHHHHHHh----hCCceEEecccccccccccCCCCCCCCHHHHH
Q 014743 223 --------------FIRVSGSELVQKYIGEGSRMVRELFVMARE----HAPSIIFMDEIDSIGSARMESGSGNGDSEVQR 284 (419)
Q Consensus 223 --------------~i~v~~s~l~~~~~g~~~~~i~~lf~~a~~----~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~ 284 (419)
++.++.++.. .-..++.+++.+.. ..+.|++|||+|.+ ..+.++
T Consensus 72 ~~~~~~i~~~~~~~~~~~~~~~~~------~i~~ir~~~~~~~~~~~~~~~kviiIde~d~l------------~~~~q~ 133 (239)
T d1njfa_ 72 CDNCREIEQGRFVDLIEIDAASRT------KVEDTRDLLDNVQYAPARGRFKVYLIDEVHML------------SRHSFN 133 (239)
T ss_dssp SHHHHHHHHTCCTTEEEEETTCSS------SHHHHHHHHHSCCCSCSSSSSEEEEEETGGGS------------CHHHHH
T ss_pred chHHHHHHcCCCCeEEEecchhcC------CHHHHHHHHHHHHhccccCCCEEEEEECcccC------------CHHHHH
Confidence 3334332211 11235555555432 23459999999995 345666
Q ss_pred HHHHHHHHccccccCCCeEEEEEeCCcchhhHHhcCCCceeEEEEcCCCCHHHHHHHHHHHHhhccc-CCCCCHHHHHHH
Q 014743 285 TMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNL-MRGIDLKKIAEK 363 (419)
Q Consensus 285 ~l~~lL~~l~~~~~~~~v~VI~tTn~~~~ld~allr~gRfd~~I~~~~P~~~~r~~Il~~~~~~~~~-~~~~dl~~la~~ 363 (419)
.|+.++.+ ...++.+|++||+++.+.+.+++ |+ ..+.|++|+.++..+++......-+. .++..+..|+..
T Consensus 134 ~Llk~lE~-----~~~~~~~il~tn~~~~i~~~i~S--Rc-~~i~~~~~~~~~i~~~l~~i~~~e~~~~~~~~l~~i~~~ 205 (239)
T d1njfa_ 134 ALLKTLEE-----PPEHVKFLLATTDPQKLPVTILS--RC-LQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARA 205 (239)
T ss_dssp HHHHHHHS-----CCTTEEEEEEESCGGGSCHHHHT--TS-EEEECCCCCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHH
T ss_pred HHHHHHhc-----CCCCeEEEEEcCCccccChhHhh--hh-cccccccCcHHHhhhHHHHHHhhhccCCCHHHHHHHHHH
Confidence 67666653 35678999999999999999998 77 57899999999988888766554322 123347788888
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHH
Q 014743 364 MNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAV 400 (419)
Q Consensus 364 t~G~sgadi~~l~~~A~~~a~~~~~~~vt~eD~~~Al 400 (419)
+.| +.+..-++++. +.......|+.+|+..++
T Consensus 206 s~G-d~R~ain~l~~----~~~~~~~~I~~~~v~~~l 237 (239)
T d1njfa_ 206 AEG-SLRDALSLTDQ----AIASGDGQVSTQAVSAML 237 (239)
T ss_dssp TTT-CHHHHHHHHHH----HHHHTTTSBCHHHHHHHH
T ss_pred cCC-CHHHHHHHHHH----HHHhCCCCcCHHHHHHHh
Confidence 887 55555555544 334456779999987765
No 17
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=99.81 E-value=1e-18 Score=163.71 Aligned_cols=227 Identities=16% Similarity=0.113 Sum_probs=157.7
Q ss_pred ccccCcHHHHHHHHHHhhcccCChhHHhhcCCCCC---CeEEEEcCCCChHHHHHHHHHhcc---------CCceEEEeC
Q 014743 161 DMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQP---KGVLLYGPPGTGKTLLARAVAHHT---------DCTFIRVSG 228 (419)
Q Consensus 161 ~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p---~~iLL~GPpGtGKT~LakalA~~~---------~~~~i~v~~ 228 (419)
+.|.|.+.+++.|.+++..++.+ |..++ ..++|+||||||||++++++++.+ ...++.+++
T Consensus 16 ~~~~~Re~e~~~l~~~l~~~~~~-------~~~~~~~~~~l~l~GppGtGKT~l~~~l~~~l~~~~~~~~~~~~~~~~~~ 88 (287)
T d1w5sa2 16 PELRVRRGEAEALARIYLNRLLS-------GAGLSDVNMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVNA 88 (287)
T ss_dssp SSCSSSCHHHHHHHHHHHHHHHT-------SSCBCCEEEEEECTTCCSSSHHHHHHHHHHHHHHHHHHTTCCEEEEEEEG
T ss_pred CCCCCHHHHHHHHHHHHHHHHHc-------CCCCCCcceEEEeECCCCCCHHHHHHHHHHHHHhhcccccCCceeeeecc
Confidence 67889999999999987654333 11222 236678999999999999999865 233555555
Q ss_pred cchhhh----------------hhchhHHHH-HHHHHHHH-hhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHH
Q 014743 229 SELVQK----------------YIGEGSRMV-RELFVMAR-EHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELL 290 (419)
Q Consensus 229 s~l~~~----------------~~g~~~~~i-~~lf~~a~-~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL 290 (419)
...... +.+.....+ ..++.... ...+.++++||+|.+..... ...+....+..++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iide~d~l~~~~~------~~~~~~~~l~~l~ 162 (287)
T d1w5sa2 89 FNAPNLYTILSLIVRQTGYPIQVRGAPALDILKALVDNLYVENHYLLVILDEFQSMLSSPR------IAAEDLYTLLRVH 162 (287)
T ss_dssp GGCCSHHHHHHHHHHHHTCCCCCTTCCHHHHHHHHHHHHHHHTCEEEEEEESTHHHHSCTT------SCHHHHHHHHTHH
T ss_pred ccccchhhHHHHHhhhcccccccccchHHHHHHHHHHHHHhccCccccceeEEEEeccccc------cchhHHHHHHHHH
Confidence 543221 122222232 33333333 34566888999999865442 3345666666777
Q ss_pred HHccccccCCCeEEEEEeCCcchhh------HHhcCCCceeEEEEcCCCCHHHHHHHHHHHHhhcccCCCCC---HHHHH
Q 014743 291 NQLDGFEASNKIKVLMATNRIDILD------QALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGID---LKKIA 361 (419)
Q Consensus 291 ~~l~~~~~~~~v~VI~tTn~~~~ld------~allr~gRfd~~I~~~~P~~~~r~~Il~~~~~~~~~~~~~d---l~~la 361 (419)
+.+.......+..+|+.+|.++..+ +.+.+ ||+..++|++|+.++..+|++..++.......++ +..+|
T Consensus 163 ~~l~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~--r~~~~i~f~~y~~~el~~Il~~r~~~~~~~~~~~~~al~~ia 240 (287)
T d1w5sa2 163 EEIPSRDGVNRIGFLLVASDVRALSYMREKIPQVES--QIGFKLHLPAYKSRELYTILEQRAELGLRDTVWEPRHLELIS 240 (287)
T ss_dssp HHSCCTTSCCBEEEEEEEEETHHHHHHHHHCHHHHT--TCSEEEECCCCCHHHHHHHHHHHHHHHBCTTSCCHHHHHHHH
T ss_pred HhcchhhcccceeEEeecccHHHHHHHHhhccchhc--ccceeeeccCCcHHHHHHHHhhhHHHhhccCCCCHHHHHHHH
Confidence 6666555566777888877665433 56666 8999999999999999999998876533333344 66777
Q ss_pred HHcCC-----CCHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHH
Q 014743 362 EKMNG-----ASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAK 402 (419)
Q Consensus 362 ~~t~G-----~sgadi~~l~~~A~~~a~~~~~~~vt~eD~~~Al~~ 402 (419)
+.+.. -.++....+|++|...|..+++..||.+|++.|+.+
T Consensus 241 ~~~~~~~~~~gd~R~ai~~l~~a~~~A~~~~~~~It~~~V~~A~~e 286 (287)
T d1w5sa2 241 DVYGEDKGGDGSARRAIVALKMACEMAEAMGRDSLSEDLVRKAVSE 286 (287)
T ss_dssp HHHCGGGTSCCCHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHH
T ss_pred HHHhccccCCCCHHHHHHHHHHHHHHHHHcCCCCCCHHHHHHHHhc
Confidence 76642 256788889999999999999999999999999874
No 18
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.79 E-value=1.5e-18 Score=159.77 Aligned_cols=216 Identities=20% Similarity=0.224 Sum_probs=151.8
Q ss_pred ccccCCCCCcccccCcHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhcc------CCceE
Q 014743 151 KVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT------DCTFI 224 (419)
Q Consensus 151 ~~~~~p~~~~~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~------~~~~i 224 (419)
|++++.|.+|++|+|++++++.|+.++... ...+++|+||||||||++++++|+++ ....+
T Consensus 2 w~~ky~P~~~~diig~~~~~~~l~~~i~~~-------------~~~~lll~Gp~G~GKTtl~~~i~~~l~~~~~~~~~~~ 68 (237)
T d1sxjd2 2 WVEKYRPKNLDEVTAQDHAVTVLKKTLKSA-------------NLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRIL 68 (237)
T ss_dssp HHHHTCCSSTTTCCSCCTTHHHHHHHTTCT-------------TCCCEEEECSTTSSHHHHHHHHHHHHHHHHHHTTSEE
T ss_pred cchhhCCCCHHHccCcHHHHHHHHHHHHcC-------------CCCeEEEECCCCCChHHHHHHHHHHHcCCcccccchh
Confidence 567888999999999999999999988652 23459999999999999999999875 45667
Q ss_pred EEeCcchhhhhh-chhHHHH---------HHHHHHHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHcc
Q 014743 225 RVSGSELVQKYI-GEGSRMV---------RELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLD 294 (419)
Q Consensus 225 ~v~~s~l~~~~~-g~~~~~i---------~~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~ 294 (419)
.++++....... ...-+.. ...+.........||||||+|.+. ....+.+..++...
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~viiiDe~d~l~------------~~~~~~l~~~~~~~- 135 (237)
T d1sxjd2 69 ELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMT------------ADAQSALRRTMETY- 135 (237)
T ss_dssp EECSSSCCCHHHHTTHHHHHHHSCCCCCCTTHHHHSCCCSCEEEEETTGGGSC------------HHHHHHHHHHHHHT-
T ss_pred heeccccccchHHHHHHHHHhhhhhhhhhHHHHhhccccCceEEEEecccccC------------HHHHHHHhhccccc-
Confidence 777665432211 1110000 001111112234599999999953 34556666666543
Q ss_pred ccccCCCeEEEEEeCCcchhhHHhcCCCceeEEEEcCCCCHHHHHHHHHHHHhhcccC-CCCCHHHHHHHcCCCCHHHHH
Q 014743 295 GFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLM-RGIDLKKIAEKMNGASGAELK 373 (419)
Q Consensus 295 ~~~~~~~v~VI~tTn~~~~ld~allr~gRfd~~I~~~~P~~~~r~~Il~~~~~~~~~~-~~~dl~~la~~t~G~sgadi~ 373 (419)
..+..+|.+++..+.+.+.+.+ |+ ..+.|++|+.++..++|+..+...++. ++..+..||..+.| +.+..-
T Consensus 136 ----~~~~~~i~~~~~~~~~~~~l~s--r~-~~i~f~~~~~~~~~~~L~~i~~~e~i~i~~~~l~~ia~~s~g-d~R~ai 207 (237)
T d1sxjd2 136 ----SGVTRFCLICNYVTRIIDPLAS--QC-SKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAG-DLRRGI 207 (237)
T ss_dssp ----TTTEEEEEEESCGGGSCHHHHH--HS-EEEECCCCCHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHTSS-CHHHHH
T ss_pred ----cccccccccccccccccccccc--hh-hhhccccccccccchhhhhhhhhhcCcCCHHHHHHHHHHcCC-CHHHHH
Confidence 4567888999999999999988 88 578999999999999998877654432 23337889999887 556655
Q ss_pred HHHHHHHHHHHHh-cCCCCCHHHHHHHH
Q 014743 374 AVCTEAGMFALRE-RRIHVTQEDFEMAV 400 (419)
Q Consensus 374 ~l~~~A~~~a~~~-~~~~vt~eD~~~Al 400 (419)
++++.++..+... ....||.+++++++
T Consensus 208 ~~L~~~~~~~~~~~~~~~It~~~i~e~~ 235 (237)
T d1sxjd2 208 TLLQSASKGAQYLGDGKNITSTQVEELA 235 (237)
T ss_dssp HHHHHTHHHHHHHCSCCCCCHHHHHHHH
T ss_pred HHHHHHHHhchhcCCCCccCHHHHHHhh
Confidence 6666666655443 34679999988764
No 19
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.78 E-value=1.6e-18 Score=159.07 Aligned_cols=207 Identities=18% Similarity=0.174 Sum_probs=145.8
Q ss_pred ccccccCCCCCcccccCcHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhccCC-----ce
Q 014743 149 LMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDC-----TF 223 (419)
Q Consensus 149 ~~~~~~~p~~~~~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~~~-----~~ 223 (419)
+.|++++.|.+|+|++|++++++.|..++... ...++||+||||||||++|+.+|+++.. .+
T Consensus 3 ~pw~eKyrP~~~~d~ig~~~~~~~L~~~~~~~-------------~~~~~ll~Gp~G~GKTt~a~~la~~l~~~~~~~~~ 69 (224)
T d1sxjb2 3 LPWVEKYRPQVLSDIVGNKETIDRLQQIAKDG-------------NMPHMIISGMPGIGKTTSVHCLAHELLGRSYADGV 69 (224)
T ss_dssp CCHHHHTCCSSGGGCCSCTHHHHHHHHHHHSC-------------CCCCEEEECSTTSSHHHHHHHHHHHHHGGGHHHHE
T ss_pred CchHhHhCCCCHHHhcCCHHHHHHHHHHHHcC-------------CCCeEEEECCCCCCchhhHHHHHHHHhcccccccc
Confidence 45788999999999999999999999998652 2346999999999999999999987643 47
Q ss_pred EEEeCcchhhhhhchhHHHHHHHHHHHHh-------hCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHcccc
Q 014743 224 IRVSGSELVQKYIGEGSRMVRELFVMARE-------HAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGF 296 (419)
Q Consensus 224 i~v~~s~l~~~~~g~~~~~i~~lf~~a~~-------~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~ 296 (419)
+.+++++..+.. .+...+..... ..+.|+++||+|.+. ...+..+...+..
T Consensus 70 ~~~n~~~~~~~~------~i~~~~~~~~~~~~~~~~~~~kviiiDe~d~~~------------~~~~~~ll~~~e~---- 127 (224)
T d1sxjb2 70 LELNASDDRGID------VVRNQIKHFAQKKLHLPPGKHKIVILDEADSMT------------AGAQQALRRTMEL---- 127 (224)
T ss_dssp EEECTTSCCSHH------HHHTHHHHHHHBCCCCCTTCCEEEEEESGGGSC------------HHHHHTTHHHHHH----
T ss_pred ccccccccCCce------ehhhHHHHHHHhhccCCCcceEEEEEecccccc------------hhHHHHHhhhccc----
Confidence 777777643321 12222221111 234599999999953 3455566655554
Q ss_pred ccCCCeEEEEEeCCcchhhHHhcCCCceeEEEEcCCCCHHHHHHHHHHHHhhcccC-CCCCHHHHHHHcCCCCHHHHHHH
Q 014743 297 EASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLM-RGIDLKKIAEKMNGASGAELKAV 375 (419)
Q Consensus 297 ~~~~~v~VI~tTn~~~~ld~allr~gRfd~~I~~~~P~~~~r~~Il~~~~~~~~~~-~~~dl~~la~~t~G~sgadi~~l 375 (419)
...++.++++|+..+.+.+.+++ |+. .|.|++|+.++...++...++.-++. ++-.+..++..+.| +.+..-..
T Consensus 128 -~~~~~~~i~~~~~~~~i~~~l~s--r~~-~i~~~~~~~~~i~~~l~~i~~~e~~~i~~~~l~~I~~~s~G-d~R~ai~~ 202 (224)
T d1sxjb2 128 -YSNSTRFAFACNQSNKIIEPLQS--QCA-ILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEG-DMRQAINN 202 (224)
T ss_dssp -TTTTEEEEEEESCGGGSCHHHHT--TSE-EEECCCCCHHHHHHHHHHHHHHHTCCBCHHHHHHHHHHHTT-CHHHHHHH
T ss_pred -cccceeeeeccCchhhhhhHHHH--HHH-HhhhcccchhhhHHHHHHHHHhcccCCCHHHHHHHHHHcCC-cHHHHHHH
Confidence 34578899999999999999998 774 69999999999999998777654332 22236788888877 44444444
Q ss_pred HHHHHHHHHHhcCCCCCHHHHHHHH
Q 014743 376 CTEAGMFALRERRIHVTQEDFEMAV 400 (419)
Q Consensus 376 ~~~A~~~a~~~~~~~vt~eD~~~Al 400 (419)
++.+. .....++.+++...+
T Consensus 203 Lq~~~-----~~~~~i~~~~i~~~~ 222 (224)
T d1sxjb2 203 LQSTV-----AGHGLVNADNVFKIV 222 (224)
T ss_dssp HHHHH-----HHHSSBCHHHHHHHH
T ss_pred HHHHH-----HcCCCcCHHHHHHHh
Confidence 44322 133467777776554
No 20
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.78 E-value=3.1e-18 Score=158.99 Aligned_cols=184 Identities=20% Similarity=0.307 Sum_probs=123.0
Q ss_pred ccccCCCCCcccccCcHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhccCC---ceEEEe
Q 014743 151 KVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDC---TFIRVS 227 (419)
Q Consensus 151 ~~~~~p~~~~~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~~~---~~i~v~ 227 (419)
|++++.|.+|++++|++++++.|..++..+ ..+.++|||||||||||++|+++|+++.. ....++
T Consensus 1 W~eky~P~~~~diig~~~~~~~L~~~~~~~------------~~~~~lll~Gp~G~GKTt~~~~la~~l~~~~~~~~~~~ 68 (252)
T d1sxje2 1 WVDKYRPKSLNALSHNEELTNFLKSLSDQP------------RDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKID 68 (252)
T ss_dssp CTTTTCCCSGGGCCSCHHHHHHHHTTTTCT------------TCCCCEEEECSTTSSHHHHHHTHHHHHSCTTCCC----
T ss_pred CCcccCCCCHHHccCcHHHHHHHHHHHHcC------------CCCCeEEEECCCCCCHHHHHHHHHHhhcCccccccccc
Confidence 567888899999999999999999887643 23446999999999999999999987511 111111
Q ss_pred Ccchh---------------------hhhhch-hHHHHHHHHHHH--------------HhhCCceEEeccccccccccc
Q 014743 228 GSELV---------------------QKYIGE-GSRMVRELFVMA--------------REHAPSIIFMDEIDSIGSARM 271 (419)
Q Consensus 228 ~s~l~---------------------~~~~g~-~~~~i~~lf~~a--------------~~~~psVl~iDEiD~l~~~r~ 271 (419)
..... ....+. ....+....... ......+++|||+|.+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iiiide~d~l----- 143 (252)
T d1sxje2 69 VRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVAQMEQVDFQDSKDGLAHRYKCVIINEANSL----- 143 (252)
T ss_dssp --------------CCEECSSEEEECCC----CCHHHHHHHHHHHTTTTC------------CCEEEEEECTTSS-----
T ss_pred cccccccccchhhhhhccCCccceeeecccccCCcceeeehhhhhhhhhhhhhhhcccccCCCceEEEecccccc-----
Confidence 11000 000011 011111111111 1123459999999985
Q ss_pred CCCCCCCCHHHHHHHHHHHHHccccccCCCeEEEEEeCCcchhhHHhcCCCceeEEEEcCCCCHHHHHHHHHHHHhh--c
Q 014743 272 ESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRR--M 349 (419)
Q Consensus 272 ~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~~ld~allr~gRfd~~I~~~~P~~~~r~~Il~~~~~~--~ 349 (419)
....++.+..++.+. ..++.+|++||.++.+++.+++ || ..|+|++|+.++..+++...+.. +
T Consensus 144 -------~~~~~~~l~~~~e~~-----~~~~~~Il~tn~~~~i~~~l~s--R~-~~i~~~~~~~~~~~~~l~~i~~~e~~ 208 (252)
T d1sxje2 144 -------TKDAQAALRRTMEKY-----SKNIRLIMVCDSMSPIIAPIKS--QC-LLIRCPAPSDSEISTILSDVVTNERI 208 (252)
T ss_dssp -------CHHHHHHHHHHHHHS-----TTTEEEEEEESCSCSSCHHHHT--TS-EEEECCCCCHHHHHHHHHHHHHHHTC
T ss_pred -------ccccchhhhcccccc-----cccccceeeeccccchhhhhhc--ch-heeeecccchhhHHHHHHHHHHHcCC
Confidence 344556666666643 4678899999999999999998 88 58999999999999999877655 3
Q ss_pred ccCCCCCHHHHHHHcCC
Q 014743 350 NLMRGIDLKKIAEKMNG 366 (419)
Q Consensus 350 ~~~~~~dl~~la~~t~G 366 (419)
.+..+.-+..|+..+.|
T Consensus 209 ~~~~~~~l~~i~~~s~G 225 (252)
T d1sxje2 209 QLETKDILKRIAQASNG 225 (252)
T ss_dssp EECCSHHHHHHHHHHTT
T ss_pred CCCcHHHHHHHHHHcCC
Confidence 33434346788888887
No 21
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=99.77 E-value=3.7e-21 Score=189.88 Aligned_cols=198 Identities=13% Similarity=0.018 Sum_probs=130.5
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcchhhhh-hchhHHHHHHHHHHH------HhhCCceEEeccc
Q 014743 191 GIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKY-IGEGSRMVRELFVMA------REHAPSIIFMDEI 263 (419)
Q Consensus 191 gi~~p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~~~~-~g~~~~~i~~lf~~a------~~~~psVl~iDEi 263 (419)
|.+.++++|||||||||||++|+++|+.++.+++++++++..+.+ ++........+|+.+ ....|+++++||+
T Consensus 150 ~~~~~~~~~~~g~~~~gk~~~~~~~~~~~~~~~i~in~s~~rs~~~l~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~Dei 229 (362)
T d1svma_ 150 NIPKKRYWLFKGPIDSGKTTLAAALLELCGGKALNVNLPLDRLNFELGVAIDQFLVVFEDVKGTGGESRDLPSGQGINNL 229 (362)
T ss_dssp CCTTCCEEEEECSTTSSHHHHHHHHHHHHCCEEECCSSCTTTHHHHHGGGTTCSCEEETTCCCSTTTTTTCCCCSHHHHH
T ss_pred CCCCcCeEEEECCCCCCHHHHHHHHHHHcCCCEEEEECcchhhHHHHHhHHHHHHHHHHHHHHhhhhccCCCCeEEEehH
Confidence 667788999999999999999999999999999999999877664 333322222222222 1233455555555
Q ss_pred ccccccccCCCCCCCCHHHHHHHHHHHHHc-cccccCCCeEEEEEeCCcchhhHHhcCCCceeEEEEcCCCCHHHHH-HH
Q 014743 264 DSIGSARMESGSGNGDSEVQRTMLELLNQL-DGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRL-DI 341 (419)
Q Consensus 264 D~l~~~r~~~~~~~~~~~~~~~l~~lL~~l-~~~~~~~~v~VI~tTn~~~~ld~allr~gRfd~~I~~~~P~~~~r~-~I 341 (419)
|.+...+.+...... +.. ..........+|+|||. ++.++++||||+..+.+.+|+...+. ++
T Consensus 230 D~l~~~~dg~~~~~~------------~~~~~~~~~~~~~p~i~ttN~---~~~~~~r~~Rf~~~i~~~~~~~~~~~~~~ 294 (362)
T d1svma_ 230 DNLRDYLDGSVKVNL------------EKKHLNKRTQIFPPGIVTMNE---YSVPKTLQARFVKQIDFRPKDYLKHCLER 294 (362)
T ss_dssp HTTHHHHHCSSCEEE------------CCSSSCCEEECCCCEEEEECS---CCCCHHHHTTEEEEEECCCCHHHHHHHHT
T ss_pred hhcccccCCcchhhh------------hhhhhchhhhccCCceeeccc---ccccccccccCceEEeecCCCcHHHHHHH
Confidence 554322211000000 000 00000012248899995 34556678999999999988776664 45
Q ss_pred HHHHHhhcccCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHh
Q 014743 342 LKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 405 (419)
Q Consensus 342 l~~~~~~~~~~~~~dl~~la~~t~G~sgadi~~l~~~A~~~a~~~~~~~vt~eD~~~Al~~v~~ 405 (419)
+..+++...+ ..+...++..+.|++|+|+..+++.+...+.++....++...|..+..++..
T Consensus 295 l~~i~~~~~l--~~~~~~L~~li~~~s~~D~~~~i~~~~~~~~~~l~~ei~~~~~~~~k~~I~~ 356 (362)
T d1svma_ 295 SEFLLEKRII--QSGIALLLMLIWYRPVAEFAQSIQSRIVEWKERLDKEFSLSVYQKMKFNVAM 356 (362)
T ss_dssp CTHHHHTTCT--TCHHHHHHHHHHHSCGGGSCGGGHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHhcccCC--CCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhhhccHHHHHHHHHHHHc
Confidence 5555555444 3456778999999999999999999988887766667888888888777653
No 22
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=99.76 E-value=1.8e-18 Score=170.58 Aligned_cols=180 Identities=23% Similarity=0.326 Sum_probs=120.4
Q ss_pred ccccCcHHHHHHHHHHhhcccCCh---hH---------------HhhcCCCCCCeEEEEcCCCChHHHHHHHHHhccCCc
Q 014743 161 DMIGGLDQQIKEIKEVIELPIKHP---EL---------------FESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT 222 (419)
Q Consensus 161 ~~I~G~~~~~~~l~~~i~~~l~~~---~~---------------~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~~~~ 222 (419)
..|+||+++|+.+..+|....++. .. ..+. -.++.+|||.||+|||||.|||+||..++.+
T Consensus 17 ~~ViGQd~Akkava~Avrn~~rR~~~~~~~r~~~~~~~~~~~~~~~~~-~~p~~niLfiGPTGvGKTElAk~LA~~~~~~ 95 (364)
T d1um8a_ 17 NYVIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEV-ELSKSNILLIGPTGSGKTLMAQTLAKHLDIP 95 (364)
T ss_dssp TTCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHT-TCCCCCEEEECCTTSSHHHHHHHHHHHTTCC
T ss_pred CeecChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccc-cCCCcceeeeCCCCccHHHHHHHHHhhcccc
Confidence 579999999999998885321110 00 0111 2478889999999999999999999999999
Q ss_pred eEEEeCcchhh-hhhchh-HHHHHHHHHH----HHhhCCceEEecccccccccccCC--CCCCCCHHHHHHHHHHHHHcc
Q 014743 223 FIRVSGSELVQ-KYIGEG-SRMVRELFVM----AREHAPSIIFMDEIDSIGSARMES--GSGNGDSEVQRTMLELLNQLD 294 (419)
Q Consensus 223 ~i~v~~s~l~~-~~~g~~-~~~i~~lf~~----a~~~~psVl~iDEiD~l~~~r~~~--~~~~~~~~~~~~l~~lL~~l~ 294 (419)
|++++++++.. .|+|.. ...++.+... ++..+.+||+|||+|+..+..... ....+++.+++.++++++...
T Consensus 96 ~ir~D~s~~~e~gyvg~dv~~~i~~l~~~~~~~v~~~~~~iv~lDEieK~~~~s~~~~~~~d~a~~~V~~~lLqild~~~ 175 (364)
T d1um8a_ 96 IAISDATSLTEAGYVGEDVENILTRLLQASDWNVQKAQKGIVFIDEIDKISRLSENRSITRDVSGEGVQQALLKIVEGSL 175 (364)
T ss_dssp EEEEEGGGCC--------CTHHHHHHHHHTTTCHHHHTTSEEEEETGGGC--------------CHHHHHHHHHHHHCCE
T ss_pred eeehhhhhcccchhhHhhhccchhhhhhhchhHHHHhhcccchhhhhhhhccccccccccccccchHHHHhhhhhhcCce
Confidence 99999999976 466653 3445566554 466778999999999987543211 112367889999999998422
Q ss_pred c--cc------cCCCeEEEEEeCCc-------------------------------------------------chhhHH
Q 014743 295 G--FE------ASNKIKVLMATNRI-------------------------------------------------DILDQA 317 (419)
Q Consensus 295 ~--~~------~~~~v~VI~tTn~~-------------------------------------------------~~ld~a 317 (419)
. .+ ...+.++|+|+|-. ..+.|+
T Consensus 176 ~~~~~~~gr~~~~~~~i~i~t~~i~~~~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~PE 255 (364)
T d1um8a_ 176 VNIPPKGGRKHPEGNFIQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFTQEKMSKKEQEAILHLVQTHDLVTYGLIPE 255 (364)
T ss_dssp EC---------------CEECTTCEEEEEECCTTHHHHTTTSCSSCCCSCCCSSCCTTTTTTSGGGCCHHHHHHTTCCHH
T ss_pred eccCCCCCCcCCcceeEEEeehhhhhhhcccchhhhhhhhhhcccccccccccccchhhhhhhhccccHHHHhhhhhHHH
Confidence 1 11 12356677777651 125688
Q ss_pred hcCCCceeEEEEcCCCCHHHHHHHHH
Q 014743 318 LLRPGRIDRKIEFPNPNEESRLDILK 343 (419)
Q Consensus 318 llr~gRfd~~I~~~~P~~~~r~~Il~ 343 (419)
|++ |||.++.|.+.+.+...+|+.
T Consensus 256 f~g--Ri~~iv~f~~L~~~~l~~Il~ 279 (364)
T d1um8a_ 256 LIG--RLPVLSTLDSISLEAMVDILQ 279 (364)
T ss_dssp HHT--TCCEEEECCCCCHHHHHHHHH
T ss_pred HHH--HhcchhhHhhhhHHHHHHHHH
Confidence 988 999999999999999999996
No 23
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.72 E-value=3.7e-17 Score=154.15 Aligned_cols=219 Identities=27% Similarity=0.380 Sum_probs=155.3
Q ss_pred CcccccCcHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhcc----------CCceEEEeC
Q 014743 159 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT----------DCTFIRVSG 228 (419)
Q Consensus 159 ~~~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~----------~~~~i~v~~ 228 (419)
.++.++|.++.++++.+.+.. ...+++||.||||+|||.+++.+|... +..++.++.
T Consensus 16 ~ld~~igRd~Ei~~l~~iL~r-------------~~k~n~lLVG~~GvGKTalv~~la~ri~~~~vp~~l~~~~i~~l~~ 82 (268)
T d1r6bx2 16 GIDPLIGREKELERAIQVLCR-------------RRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDI 82 (268)
T ss_dssp CSCCCCSCHHHHHHHHHHHTS-------------SSSCEEEEECCTTSSHHHHHHHHHHHHHHTCSCGGGTTCEEEECCC
T ss_pred CCCcccChHHHHHHHHHHHhc-------------CccCCcEEECCCCCcHHHHHHHHHHHHHhCCcccccccceeEEeee
Confidence 346789999999999998876 355789999999999999999999742 567999999
Q ss_pred cchhh--hhhchhHHHHHHHHHHHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCeEEEE
Q 014743 229 SELVQ--KYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLM 306 (419)
Q Consensus 229 s~l~~--~~~g~~~~~i~~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~ 306 (419)
+.++. +|.|+.+..+..+++.+......|+||||++.|++.... ++++....+.|...| .++.+.||+
T Consensus 83 ~~liag~~~~g~~e~r~~~i~~~~~~~~~iIlfiDeih~l~~~g~~---~g~~~d~a~~Lkp~L-------~rg~i~vIg 152 (268)
T d1r6bx2 83 GSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAA---SGGQVDAANLIKPLL-------SSGKIRVIG 152 (268)
T ss_dssp C---CCCCCSSCHHHHHHHHHHHHSSSSCEEEEETTTTTTTTSCCS---SSCHHHHHHHHSSCS-------SSCCCEEEE
T ss_pred chHhccCccchhHHHHHHHHHHHhhccCCceEEecchHHHhcCCCC---CCccccHHHHhhHHH-------hCCCCeEEE
Confidence 99985 789999999999999998888899999999999875432 122234444443333 567899999
Q ss_pred EeCCcc-----hhhHHhcCCCceeEEEEcCCCCHHHHHHHHHHHHhhcccCCCC--C---HHHH---HHHc--CCCCHHH
Q 014743 307 ATNRID-----ILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGI--D---LKKI---AEKM--NGASGAE 371 (419)
Q Consensus 307 tTn~~~-----~ld~allr~gRfd~~I~~~~P~~~~r~~Il~~~~~~~~~~~~~--d---l~~l---a~~t--~G~sgad 371 (419)
+|+.-+ .-|++|.| ||. .|.++.|+.++-.+|+......+.....+ . +..+ +.+. +.+-|.-
T Consensus 153 atT~eey~~~~e~d~al~r--rF~-~I~V~Eps~e~t~~IL~~~~~~~e~~h~v~~~~~al~~~v~ls~ryi~~~~~PdK 229 (268)
T d1r6bx2 153 STTYQEFSNIFEKDRALAR--RFQ-KIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDK 229 (268)
T ss_dssp EECHHHHHCCCCCTTSSGG--GEE-EEECCCCCHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHCTTSCTTHH
T ss_pred eCCHHHHHHHHhhcHHHHh--hhc-ccccCCCCHHHHHHHHHHhhHHHhccCCEEeChHHHHHHHHHHHhhccCCCCCcH
Confidence 887543 44789999 997 78999999999999998655443221111 1 2222 3331 2233333
Q ss_pred HHHHHHHHHHHHHHh----cCCCCCHHHHHHHHHHH
Q 014743 372 LKAVCTEAGMFALRE----RRIHVTQEDFEMAVAKV 403 (419)
Q Consensus 372 i~~l~~~A~~~a~~~----~~~~vt~eD~~~Al~~v 403 (419)
.-.++.+|+..+... ....++.+|++..+.++
T Consensus 230 AIdllDea~a~~~~~~~~~~~~~i~~~di~~~i~~~ 265 (268)
T d1r6bx2 230 AIDVIDEAGARARLMPVSKRKKTVNVADIESVVARI 265 (268)
T ss_dssp HHHHHHHHHHHHHHSSSCCCCCSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccccCcccCCHHHHHHHHHHH
Confidence 444777776655322 34568999998887765
No 24
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=99.65 E-value=3e-16 Score=140.70 Aligned_cols=157 Identities=24% Similarity=0.367 Sum_probs=121.3
Q ss_pred CcccccCcHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhcc----------CCceEEEeC
Q 014743 159 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT----------DCTFIRVSG 228 (419)
Q Consensus 159 ~~~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~----------~~~~i~v~~ 228 (419)
.++.++|.++.++++.+.+.. ...++++|.||||+|||++++.+|... +..++.++.
T Consensus 20 ~ld~~igRd~Ei~~l~~iL~r-------------~~k~n~lLvG~pGVGKTalv~~LA~ri~~~~vp~~L~~~~i~~ld~ 86 (195)
T d1jbka_ 20 KLDPVIGRDEEIRRTIQVLQR-------------RTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDM 86 (195)
T ss_dssp CSCCCCSCHHHHHHHHHHHTS-------------SSSCEEEEECCTTSCHHHHHHHHHHHHHHTCSCGGGTTCEEEEECH
T ss_pred CCCCCcCcHHHHHHHHHHHhc-------------cCCCCeEEEecCCcccHHHHHHHHHHHHhCCCCHHHcCceEEEeeH
Confidence 346789999999999998876 345689999999999999999999743 567999999
Q ss_pred cchh--hhhhchhHHHHHHHHHHHHhhC-CceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCeEEE
Q 014743 229 SELV--QKYIGEGSRMVRELFVMAREHA-PSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVL 305 (419)
Q Consensus 229 s~l~--~~~~g~~~~~i~~lf~~a~~~~-psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI 305 (419)
+.++ .+|.|+.+..+..+++.+.... ..||||||++.|.+.....+ ..+..+.|...|. ++.+.||
T Consensus 87 ~~LiAg~~~rG~~E~rl~~il~e~~~~~~~iILfIDeih~l~~~g~~~g----~~d~~~~Lkp~L~-------rg~l~~I 155 (195)
T d1jbka_ 87 GALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADG----AMDAGNMLKPALA-------RGELHCV 155 (195)
T ss_dssp HHHHTTTCSHHHHHHHHHHHHHHHHHSTTTEEEEEETGGGGTT----------CCCCHHHHHHHHH-------TTSCCEE
T ss_pred HHHhccCCccHHHHHHHHHHHHHHhcCCCcEEEEcchHHHHhcCCCCCC----cccHHHHHHHHHh-------CCCceEE
Confidence 9988 4688999999999998876655 57899999999986543211 1234566666664 4568888
Q ss_pred EEeCCcc-----hhhHHhcCCCceeEEEEcCCCCHHHHHHHH
Q 014743 306 MATNRID-----ILDQALLRPGRIDRKIEFPNPNEESRLDIL 342 (419)
Q Consensus 306 ~tTn~~~-----~ld~allr~gRfd~~I~~~~P~~~~r~~Il 342 (419)
++|...+ .-|++|.| ||. .|.+..|+.++-..||
T Consensus 156 gatT~eey~~~~e~d~aL~r--rF~-~I~V~Ep~~e~t~~IL 194 (195)
T d1jbka_ 156 GATTLDEYRQYIEKDAALER--RFQ-KVFVAEPSVEDTIAIL 194 (195)
T ss_dssp EEECHHHHHHHTTTCHHHHT--TEE-EEECCCCCHHHHHTTC
T ss_pred ecCCHHHHHHHHHcCHHHHh--cCC-EeecCCCCHHHHHHHh
Confidence 8887543 44889999 997 7899999998887765
No 25
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=99.63 E-value=5.5e-15 Score=143.33 Aligned_cols=222 Identities=15% Similarity=0.210 Sum_probs=141.5
Q ss_pred CCCCcccccCcHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhccCC--------------
Q 014743 156 PDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDC-------------- 221 (419)
Q Consensus 156 p~~~~~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~~~-------------- 221 (419)
|...|.+|+||+.+|+.|.-+...+ .+.++||+||||||||++||+++.-+..
T Consensus 2 ~~~~f~~I~Gq~~~kral~laa~~~-------------~~h~vLl~G~pG~GKT~lar~~~~iLp~~~~~~~~~~~~~~~ 68 (333)
T d1g8pa_ 2 PVFPFSAIVGQEDMKLALLLTAVDP-------------GIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNV 68 (333)
T ss_dssp CCCCGGGSCSCHHHHHHHHHHHHCG-------------GGCCEEEECCGGGCTTHHHHHHHHHSCCEEEETTCTTCCSSG
T ss_pred CCCChhhccCcHHHHHHHHHHHhcc-------------CCCeEEEECCCCccHHHHHHHHHHhCCCchhhccCccccCcc
Confidence 4557899999999999877555432 2347999999999999999999975411
Q ss_pred -------------------ceEEEeCcchhhhhhchhHHHHHHHHHH---------HHhhCCceEEecccccccccccCC
Q 014743 222 -------------------TFIRVSGSELVQKYIGEGSRMVRELFVM---------AREHAPSIIFMDEIDSIGSARMES 273 (419)
Q Consensus 222 -------------------~~i~v~~s~l~~~~~g~~~~~i~~lf~~---------a~~~~psVl~iDEiD~l~~~r~~~ 273 (419)
+++....+--....+|... +...+.. .......|+|+||+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~d--~~~~~~~g~~~~~~G~l~~A~~gvl~iDEi~~-------- 138 (333)
T d1g8pa_ 69 EMIPDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALD--IERAISKGEKAFEPGLLARANRGYLYIDECNL-------- 138 (333)
T ss_dssp GGSCTTCCCSCCCEEEECCCEEEECTTCCHHHHHCEEC--HHHHHHHCGGGEECCHHHHHTTEEEEETTGGG--------
T ss_pred ccccchhhccccCcccccCceeeccCCCCcccccCcch--hhhccccCcceeeccccccccccEeecccHHH--------
Confidence 1111111000011111100 0011100 0111235999999988
Q ss_pred CCCCCCHHHHHHHHHHHHHcccc--------ccCCCeEEEEEeCCc-chhhHHhcCCCceeEEEEcCCC-CHHHHHHHHH
Q 014743 274 GSGNGDSEVQRTMLELLNQLDGF--------EASNKIKVLMATNRI-DILDQALLRPGRIDRKIEFPNP-NEESRLDILK 343 (419)
Q Consensus 274 ~~~~~~~~~~~~l~~lL~~l~~~--------~~~~~v~VI~tTn~~-~~ld~allr~gRfd~~I~~~~P-~~~~r~~Il~ 343 (419)
..+.+++.|++.|++..-. ....++.+|+|+|.. ..++++++. ||+..+.++.| +...+.++..
T Consensus 139 ----~~~~~~~aLl~~me~~~v~i~r~g~~~~~p~~f~liaa~Np~~~~l~~~llD--Rf~~~i~v~~~~~~~~~~~~~~ 212 (333)
T d1g8pa_ 139 ----LEDHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEGDLRPQLLD--RFGLSVEVLSPRDVETRVEVIR 212 (333)
T ss_dssp ----SCHHHHHHHHHHHHHSEEEECCTTCCEEEECCEEEEEEECSCSCCCCHHHHT--TCSEEEECCCCCSHHHHHHHHH
T ss_pred ----HHHHHHHHHhhhhcCCeEEecccCceecCCCCEEEEEecCccccccccchhh--hhcceeeccCcchhhHHHHHHH
Confidence 4577889999999864321 112367888888864 468999999 99999999877 5566655553
Q ss_pred HHHh-------------------------------hcccCCC--CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcCCC
Q 014743 344 IHSR-------------------------------RMNLMRG--IDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIH 390 (419)
Q Consensus 344 ~~~~-------------------------------~~~~~~~--~dl~~la~~t~G~sgadi~~l~~~A~~~a~~~~~~~ 390 (419)
.... ......+ ..+..+.......|.+-...+++-|.-.|.-+++..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~v~~~~~~~~~~~~~~~~~~~~S~R~~~~llrvArtiA~L~gr~~ 292 (333)
T d1g8pa_ 213 RRDTYDADPKAFLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGATA 292 (333)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHGGGCBCCHHHHHHHHHHHHHSSSCSHHHHHHHHHHHHHHHHHTTCSB
T ss_pred hhhhcccChHHHHHHHHHHHHHHHHHHHHHhhcccceecCHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHcCCCC
Confidence 2110 0000000 012233344555688888899999988998999999
Q ss_pred CCHHHHHHHHHHHHhh
Q 014743 391 VTQEDFEMAVAKVMKK 406 (419)
Q Consensus 391 vt~eD~~~Al~~v~~~ 406 (419)
|+.+|+..|+.-++..
T Consensus 293 V~~~di~~a~~lvL~h 308 (333)
T d1g8pa_ 293 VGRDHLKRVATMALSH 308 (333)
T ss_dssp CCHHHHHHHHHHHHGG
T ss_pred CCHHHHHHHHHHHHHh
Confidence 9999999999888764
No 26
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=99.56 E-value=1.3e-13 Score=125.71 Aligned_cols=192 Identities=21% Similarity=0.321 Sum_probs=126.6
Q ss_pred CCCCcccc-cC--cHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhcc---CCceEEEeCc
Q 014743 156 PDSTYDMI-GG--LDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT---DCTFIRVSGS 229 (419)
Q Consensus 156 p~~~~~~I-~G--~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~---~~~~i~v~~s 229 (419)
|..+|++. +| ...+.+.+.+++..| | ...+.++||||||||||+|++|+++++ +..++.++..
T Consensus 5 ~~~tFdnF~vg~~N~~a~~~~~~~~~~~----------~-~~~n~l~l~G~~G~GKTHLl~A~~~~~~~~~~~~~~~~~~ 73 (213)
T d1l8qa2 5 PKYTLENFIVGEGNRLAYEVVKEALENL----------G-SLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSAD 73 (213)
T ss_dssp TTCCSSSCCCCTTTHHHHHHHHHHHHTT----------T-TSCSSEEEECSSSSSHHHHHHHHHHHHHHTTCCEEEEEHH
T ss_pred CCCChhhccCCCcHHHHHHHHHHHHhCc----------C-CCCCcEEEECCCCCcHHHHHHHHHHHhccCccceEEechH
Confidence 55677774 45 566677777776654 1 112348999999999999999999875 5678888888
Q ss_pred chhhhhhchhHH-HHHHHHHHHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCeEEEEEe
Q 014743 230 ELVQKYIGEGSR-MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMAT 308 (419)
Q Consensus 230 ~l~~~~~g~~~~-~i~~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~tT 308 (419)
++...+...... ....+++.. ...++|+||+||.+. +....+..+..+++.+. ..++.+||.++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~--~~~dll~iDDi~~i~----------~~~~~~~~lf~lin~~~---~~~~~iiits~ 138 (213)
T d1l8qa2 74 DFAQAMVEHLKKGTINEFRNMY--KSVDLLLLDDVQFLS----------GKERTQIEFFHIFNTLY---LLEKQIILASD 138 (213)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHH--HTCSEEEEECGGGGT----------TCHHHHHHHHHHHHHHH---HTTCEEEEEES
T ss_pred HHHHHHHHHHHccchhhHHHHH--hhccchhhhhhhhhc----------CchHHHHHHHHHHHHHh---hccceEEEecC
Confidence 877665443221 222333332 245799999999985 34567777888887663 33445555555
Q ss_pred CCcchh---hHHhcCCCce--eEEEEcCCCCHHHHHHHHHHHHhhcccC-CCCCHHHHHHHcCCCCHHHHHHHHHH
Q 014743 309 NRIDIL---DQALLRPGRI--DRKIEFPNPNEESRLDILKIHSRRMNLM-RGIDLKKIAEKMNGASGAELKAVCTE 378 (419)
Q Consensus 309 n~~~~l---d~allr~gRf--d~~I~~~~P~~~~r~~Il~~~~~~~~~~-~~~dl~~la~~t~G~sgadi~~l~~~ 378 (419)
..|..+ .+.+.+ || ..++.++ |+.+.|.+|++......++. ++--+..|+.++. +.++|..+++.
T Consensus 139 ~~p~~l~~~~~dL~S--RL~~g~~~~i~-p~d~~~~~iL~~~a~~rgl~l~~~v~~yl~~~~~--~~R~L~~~l~~ 209 (213)
T d1l8qa2 139 RHPQKLDGVSDRLVS--RFEGGILVEIE-LDNKTRFKIIKEKLKEFNLELRKEVIDYLLENTK--NVREIEGKIKL 209 (213)
T ss_dssp SCGGGCTTSCHHHHH--HHHTSEEEECC-CCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHCS--SHHHHHHHHHH
T ss_pred CcchhccccchHHHH--HhhCceEEEEC-CCcHHHHHHHHHHHHHcCCCCCHHHHHHHHHhcC--cHHHHHHHHHH
Confidence 556544 466766 66 3566776 56788999999887665543 2223666777763 57888777654
No 27
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=99.56 E-value=3.8e-14 Score=140.15 Aligned_cols=198 Identities=20% Similarity=0.302 Sum_probs=127.4
Q ss_pred CcccccCcHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhcc----------CCceEEEeC
Q 014743 159 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT----------DCTFIRVSG 228 (419)
Q Consensus 159 ~~~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~----------~~~~i~v~~ 228 (419)
.++.++|.++.++++.+.+.. ...++++|.||||+|||.++..+|... +..++.++.
T Consensus 20 ~ld~~~gr~~ei~~~~~~L~r-------------~~k~n~llvG~~GvGKtaiv~~la~~i~~~~vp~~l~~~~i~~ld~ 86 (387)
T d1qvra2 20 KLDPVIGRDEEIRRVIQILLR-------------RTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQM 86 (387)
T ss_dssp CSCCCCSCHHHHHHHHHHHHC-------------SSCCCCEEEECTTSCHHHHHHHHHHHHHHTCSCTTSTTCEEEEECC
T ss_pred CCCCCcCcHHHHHHHHHHHhc-------------CCCCCCeEECCCCCCHHHHHHHHHHHHHhCCCCHHHcCceEEEeeH
Confidence 346789999999999999876 345667999999999999999999742 456999999
Q ss_pred cchhh--hhhchhHHHHHHHHHHHHhhC-CceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCeEEE
Q 014743 229 SELVQ--KYIGEGSRMVRELFVMAREHA-PSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVL 305 (419)
Q Consensus 229 s~l~~--~~~g~~~~~i~~lf~~a~~~~-psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI 305 (419)
+.++. +|.|+.+..+..++..+.... +.||||||++.|++.... .+..+..++|...|. ++.+.||
T Consensus 87 ~~l~ag~~~~g~~e~r~~~i~~~~~~~~~~~ilfide~h~l~~~g~~----~g~~d~a~~Lkp~L~-------rg~~~~I 155 (387)
T d1qvra2 87 GSLLAGAKYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAGKA----EGAVDAGNMLKPALA-------RGELRLI 155 (387)
T ss_dssp -----------CHHHHHHHHHHHHHTTCSSEEEEECCC-----------------------HHHHH-------TTCCCEE
T ss_pred hhhhcccCcchhHHHHHHHHHHHhccCCCceEEEeccHHHHhcCCCC----CCcccHHHHHHHHHh-------CCCccee
Confidence 99985 688999999999998887765 678999999999875432 123455677777774 4568889
Q ss_pred EEeCCcc----hhhHHhcCCCceeEEEEcCCCCHHHHHHHHHHHHhhcccCCCCC-----HHHHHHH-----cCCCCHHH
Q 014743 306 MATNRID----ILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGID-----LKKIAEK-----MNGASGAE 371 (419)
Q Consensus 306 ~tTn~~~----~ld~allr~gRfd~~I~~~~P~~~~r~~Il~~~~~~~~~~~~~d-----l~~la~~-----t~G~sgad 371 (419)
++|..-+ .-|++|.| ||. .|.++.|+.++-..||+.....+.....+. +...+.. ++-+-|.-
T Consensus 156 ~~tT~~ey~~~e~d~al~r--rF~-~v~v~ep~~~~~~~il~~~~~~~e~~h~v~~~~~ai~~~v~ls~ryi~~r~~PdK 232 (387)
T d1qvra2 156 GATTLDEYREIEKDPALER--RFQ-PVYVDEPTVEETISILRGLKEKYEVHHGVRISDSAIIAAATLSHRYITERRLPDK 232 (387)
T ss_dssp EEECHHHHHHHTTCTTTCS--CCC-CEEECCCCHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHHHHHHHCCSSCTHHH
T ss_pred eecCHHHHHHhcccHHHHH--hcc-cccCCCCcHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHHhcccccccccChhh
Confidence 9887422 23778888 997 689999999999999987655543222221 3333332 34566666
Q ss_pred HHHHHHHHHHHH
Q 014743 372 LKAVCTEAGMFA 383 (419)
Q Consensus 372 i~~l~~~A~~~a 383 (419)
.-.++.+|+...
T Consensus 233 Aidlld~a~a~~ 244 (387)
T d1qvra2 233 AIDLIDEAAARL 244 (387)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 667777776554
No 28
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=99.52 E-value=5.1e-14 Score=127.71 Aligned_cols=167 Identities=16% Similarity=0.211 Sum_probs=114.0
Q ss_pred CcHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhccCCc----------------------
Q 014743 165 GLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT---------------------- 222 (419)
Q Consensus 165 G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~~~~---------------------- 222 (419)
+++++.+++...+... +.|.++||+||||+|||++|+.+|+.+-+.
T Consensus 6 w~~~~~~~l~~~~~~~------------~l~h~lLl~Gp~G~GKtt~a~~~a~~l~~~~~~~~~~~~~~~~~~~i~~~~~ 73 (207)
T d1a5ta2 6 WLRPDFEKLVASYQAG------------RGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTH 73 (207)
T ss_dssp GGHHHHHHHHHHHHTT------------CCCSEEEEECCTTSCHHHHHHHHHHHHTCSSCBTTBCCSCSHHHHHHHHTCC
T ss_pred ccHHHHHHHHHHHHcC------------CcCeEEEEECCCCCcHHHHHHHHHHhcccccccccccccccchhhhhhhccc
Confidence 4677788888887653 567889999999999999999999865211
Q ss_pred --eEEEeCcchhhhhhchhHHHHHHHHHHHHh----hCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHcccc
Q 014743 223 --FIRVSGSELVQKYIGEGSRMVRELFVMARE----HAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGF 296 (419)
Q Consensus 223 --~i~v~~s~l~~~~~g~~~~~i~~lf~~a~~----~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~ 296 (419)
++.+....- ... -.-..++++...+.. ....|++|||+|.+ ..+.++.|+.+|++
T Consensus 74 ~~~~~~~~~~~-~~~--i~~~~ir~l~~~~~~~~~~~~~kviIide~d~l------------~~~a~n~Llk~lEe---- 134 (207)
T d1a5ta2 74 PDYYTLAPEKG-KNT--LGVDAVREVTEKLNEHARLGGAKVVWVTDAALL------------TDAAANALLKTLEE---- 134 (207)
T ss_dssp TTEEEECCCTT-CSS--BCHHHHHHHHHHTTSCCTTSSCEEEEESCGGGB------------CHHHHHHHHHHHTS----
T ss_pred cccchhhhhhc-ccc--cccchhhHHhhhhhhccccCccceEEechhhhh------------hhhhhHHHHHHHHh----
Confidence 111111100 000 112335556555432 34569999999995 35567777777654
Q ss_pred ccCCCeEEEEEeCCcchhhHHhcCCCceeEEEEcCCCCHHHHHHHHHHHHhhcccCCCCCHHHHHHHcCCCCHHH
Q 014743 297 EASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAE 371 (419)
Q Consensus 297 ~~~~~v~VI~tTn~~~~ld~allr~gRfd~~I~~~~P~~~~r~~Il~~~~~~~~~~~~~dl~~la~~t~G~sgad 371 (419)
...++.+|++||+++.+.|.+++ |+ ..+.|++|+.++...+|+.. ..+ ++..+..++..++| ++++
T Consensus 135 -p~~~~~fIl~t~~~~~ll~tI~S--Rc-~~i~~~~~~~~~~~~~L~~~---~~~-~~~~~~~i~~~s~G-s~r~ 200 (207)
T d1a5ta2 135 -PPAETWFFLATREPERLLATLRS--RC-RLHYLAPPPEQYAVTWLSRE---VTM-SQDALLAALRLSAG-SPGA 200 (207)
T ss_dssp -CCTTEEEEEEESCGGGSCHHHHT--TS-EEEECCCCCHHHHHHHHHHH---CCC-CHHHHHHHHHHTTT-CHHH
T ss_pred -hcccceeeeeecChhhhhhhhcc--ee-EEEecCCCCHHHHHHHHHHc---CCC-CHHHHHHHHHHcCC-CHHH
Confidence 35789999999999999999998 87 68999999999888877532 222 22335667777776 4443
No 29
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=99.52 E-value=9.3e-14 Score=139.75 Aligned_cols=77 Identities=29% Similarity=0.508 Sum_probs=56.5
Q ss_pred ccccCcHHHHHHHHHHhhcccCChhHHhhc-CCCCCCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcchhhh-hhc
Q 014743 161 DMIGGLDQQIKEIKEVIELPIKHPELFESL-GIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-YIG 237 (419)
Q Consensus 161 ~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~-gi~~p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~~~-~~g 237 (419)
.-|+||+++|+.|.-++....++-.+-..+ .--.|++|||.||||||||+|||+||+.++.||+.++|+.|..- |+|
T Consensus 14 ~yVvGQ~~AKk~lsvav~nhyrR~~~~~~~~~ei~ksNILliGPTGvGKTlLAr~LAk~l~VPFv~~daT~fTeaGYvG 92 (443)
T d1g41a_ 14 QHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVG 92 (443)
T ss_dssp TTCCSCHHHHHHHHHHHHHHHHHHHSCTTTTTTCCCCCEEEECCTTSSHHHHHHHHHHHTTCCEEEEEGGGGC----CC
T ss_pred CcccCcHHHHHHHHHHHHHHHHHhhcccccccccccccEEEECCCCCCHHHHHHHHHHHhCCCEEEeecceeeecceee
Confidence 469999999999999886432111100000 01246799999999999999999999999999999999988643 444
No 30
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=99.38 E-value=8.6e-14 Score=129.42 Aligned_cols=69 Identities=23% Similarity=0.321 Sum_probs=54.6
Q ss_pred CCcccccCcHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcchhhhh
Q 014743 158 STYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKY 235 (419)
Q Consensus 158 ~~~~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~~~~ 235 (419)
++|.+..+++...+.+.+.... ..+...|+++||+||||||||++|++||++++.+|+.++++++...+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~P~~ilL~GpPGtGKT~la~~la~~~~~~~~~i~~d~~~~~~ 72 (273)
T d1gvnb_ 4 VNFTDKQFENRLNDNLEELIQG---------KKAVESPTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQQH 72 (273)
T ss_dssp TCCCHHHHHHHHHHHHHHHHTT---------CCCCSSCEEEEEECCTTSCTHHHHHHHHHHTTTCCEEECTHHHHTTS
T ss_pred cccChHHHHHHHHHHHHHHHhc---------ccCCCCCEEEEEECCCCCCHHHHHHHHHHHhhcceEEEecHHHHHHh
Confidence 3456666666666666665543 22457899999999999999999999999999999999999886543
No 31
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=99.32 E-value=1.5e-11 Score=114.10 Aligned_cols=205 Identities=21% Similarity=0.287 Sum_probs=127.2
Q ss_pred ccCcHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhcc---CCceEEEeCcchhhh-----
Q 014743 163 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT---DCTFIRVSGSELVQK----- 234 (419)
Q Consensus 163 I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~---~~~~i~v~~s~l~~~----- 234 (419)
.+|...+.+.+.+.+... ......|||+||+|||||++|++|.... ..+++.++|..+...
T Consensus 2 ~v~~S~~~~~~~~~~~~~-----------a~~~~pvlI~Ge~GtGK~~~A~~ih~~s~~~~~~~~~~~~~~~~~~~~~~~ 70 (247)
T d1ny5a2 2 YVFESPKMKEILEKIKKI-----------SCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAE 70 (247)
T ss_dssp CCCCSHHHHHHHHHHHHH-----------TTCCSCEEEECSTTSSHHHHHHHHHHHSTTTTSCEEEEETTTSCHHHHHHH
T ss_pred eEecCHHHHHHHHHHHHH-----------hCCCCCEEEECCCCcCHHHHHHHHHHhcCCcccccccchhhhhhhcccHHH
Confidence 578888888888877652 1334569999999999999999998754 457899998765432
Q ss_pred hhchhHH-------HHHHHHHHHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHcccc------ccCCC
Q 014743 235 YIGEGSR-------MVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGF------EASNK 301 (419)
Q Consensus 235 ~~g~~~~-------~i~~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~------~~~~~ 301 (419)
.+|...+ ....+|+.| ....|||||||.+ +...+..+.+++..-... ....+
T Consensus 71 lfg~~~~~~~~~~~~~~g~l~~a---~gGtL~l~~i~~L------------~~~~Q~~L~~~l~~~~~~~~~~~~~~~~~ 135 (247)
T d1ny5a2 71 LFGYEKGAFTGAVSSKEGFFELA---DGGTLFLDEIGEL------------SLEAQAKLLRVIESGKFYRLGGRKEIEVN 135 (247)
T ss_dssp HHCBCTTSSTTCCSCBCCHHHHT---TTSEEEEESGGGC------------CHHHHHHHHHHHHHSEECCBTCCSBEECC
T ss_pred hcCcccCCcCCcccccCCHHHcc---CCCEEEEeChHhC------------CHHHHHHHHHHHHhCCEEECCCCCceecC
Confidence 1221100 001234444 3458999999994 567888888888753211 11226
Q ss_pred eEEEEEeCCcc-------hhhHHhcCCCcee-EEEEcCCCC--HHHHHHHHHHHHhhcccC-----CCCCHHHHHHH-cC
Q 014743 302 IKVLMATNRID-------ILDQALLRPGRID-RKIEFPNPN--EESRLDILKIHSRRMNLM-----RGIDLKKIAEK-MN 365 (419)
Q Consensus 302 v~VI~tTn~~~-------~ld~allr~gRfd-~~I~~~~P~--~~~r~~Il~~~~~~~~~~-----~~~dl~~la~~-t~ 365 (419)
+.+|++|+.+- .+++.|+. |+. ..|.+|+.. .++...|+..+++.+... ..+.-..+... ..
T Consensus 136 ~RlI~~s~~~l~~l~~~~~f~~~L~~--~l~~~~i~lPpLreR~~Di~~l~~~~l~~~~~~~~~~~~~ls~~al~~L~~~ 213 (247)
T d1ny5a2 136 VRILAATNRNIKELVKEGKFREDLYY--RLGVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLSY 213 (247)
T ss_dssp CEEEEEESSCHHHHHHTTSSCHHHHH--HHTTEEEECCCGGGCHHHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHS
T ss_pred eEEEEecCCCHHHHHHcCCCcHHHHh--hcCeeeecCCChhhchhhHhhhhhhhhhhhhhhcCCCCCCCCHHHHHHHHhC
Confidence 77888887631 12333333 332 357777774 356666777766653321 12333333222 22
Q ss_pred CCCH--HHHHHHHHHHHHHHHHhcCCCCCHHHHHH
Q 014743 366 GASG--AELKAVCTEAGMFALRERRIHVTQEDFEM 398 (419)
Q Consensus 366 G~sg--adi~~l~~~A~~~a~~~~~~~vt~eD~~~ 398 (419)
.|.| ++|++++++|...+ ....|+.+|+-.
T Consensus 214 ~WPGNl~EL~~~l~~a~~~~---~~~~I~~~dl~~ 245 (247)
T d1ny5a2 214 PWYGNVRELKNVIERAVLFS---EGKFIDRGELSC 245 (247)
T ss_dssp CCTTHHHHHHHHHHHHHHHC---CSSEECHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhC---CCCeECHHHccc
Confidence 4444 78999998887554 556788888753
No 32
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.22 E-value=2.3e-11 Score=109.17 Aligned_cols=129 Identities=13% Similarity=0.248 Sum_probs=96.3
Q ss_pred HHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhccC------CceEEEeCcchhhhhhchhHHH
Q 014743 169 QIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD------CTFIRVSGSELVQKYIGEGSRM 242 (419)
Q Consensus 169 ~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~~------~~~i~v~~s~l~~~~~g~~~~~ 242 (419)
+.+.++.+|.. ..+.++||+||||||||++|+.+++... ..++.+.+.. +-+ +-..
T Consensus 2 ~~~~l~~~i~~-------------~~~~~~l~~G~~g~gk~~~a~~l~~~i~~~~~~h~D~~~i~~~~---~~I--~Id~ 63 (198)
T d2gnoa2 2 QLETLKRIIEK-------------SEGISILINGEDLSYPREVSLELPEYVEKFPPKASDVLEIDPEG---ENI--GIDD 63 (198)
T ss_dssp HHHHHHHHHHT-------------CSSEEEEEECSSSSHHHHHHHHHHHHHHTSCCCTTTEEEECCSS---SCB--CHHH
T ss_pred HHHHHHHHHhc-------------CCCceEEEECCCCCCHHHHHHHHHHHHhccccCCCCEEEEeCCc---CCC--CHHH
Confidence 45667777765 4577999999999999999999998652 2477776531 111 2235
Q ss_pred HHHHHHHHHhh----CCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCeEEEEEeCCcchhhHHh
Q 014743 243 VRELFVMAREH----APSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQAL 318 (419)
Q Consensus 243 i~~lf~~a~~~----~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~~ld~al 318 (419)
+|.+...+... ...|++|||+|.+ ..+.++.|+..|.+ ...++++|++|++++.+.|.+
T Consensus 64 IR~i~~~~~~~~~~~~~KviIId~ad~l------------~~~aqNaLLK~LEE-----Pp~~t~fiLit~~~~~ll~TI 126 (198)
T d2gnoa2 64 IRTIKDFLNYSPELYTRKYVIVHDCERM------------TQQAANAFLKALEE-----PPEYAVIVLNTRRWHYLLPTI 126 (198)
T ss_dssp HHHHHHHHTSCCSSSSSEEEEETTGGGB------------CHHHHHHTHHHHHS-----CCTTEEEEEEESCGGGSCHHH
T ss_pred HHHHHHHHhhCcccCCCEEEEEeCcccc------------chhhhhHHHHHHhC-----CCCCceeeeccCChhhCHHHH
Confidence 67777776543 2459999999995 45677888887765 457899999999999999999
Q ss_pred cCCCceeEEEEcCCCCH
Q 014743 319 LRPGRIDRKIEFPNPNE 335 (419)
Q Consensus 319 lr~gRfd~~I~~~~P~~ 335 (419)
++ |+ ..+.|++|..
T Consensus 127 ~S--RC-~~i~~~~p~~ 140 (198)
T d2gnoa2 127 KS--RV-FRVVVNVPKE 140 (198)
T ss_dssp HT--TS-EEEECCCCHH
T ss_pred hc--ce-EEEeCCCchH
Confidence 98 77 5788888864
No 33
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=99.21 E-value=7.2e-10 Score=101.79 Aligned_cols=188 Identities=15% Similarity=0.179 Sum_probs=120.5
Q ss_pred CcccccCcHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcchhhhh---
Q 014743 159 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKY--- 235 (419)
Q Consensus 159 ~~~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~~~~--- 235 (419)
.-+++.|.++.+++|.+. .++.++++||+|+|||+|++.++...+..+..+++..+....
T Consensus 10 ~~~~f~GR~~el~~l~~~-----------------~~~~i~i~G~~G~GKTsLl~~~~~~~~~~~~~i~~~~~~~~~~~~ 72 (283)
T d2fnaa2 10 NRKDFFDREKEIEKLKGL-----------------RAPITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKFEERNYIS 72 (283)
T ss_dssp SGGGSCCCHHHHHHHHHT-----------------CSSEEEEEESTTSSHHHHHHHHHHHHTCCEEEEEGGGGTTCSCCC
T ss_pred ChhhCCChHHHHHHHHhc-----------------cCCEEEEEcCCCCcHHHHHHHHHHHCCCCeEEEEecccccccccc
Confidence 347899999999888652 346799999999999999999999988888877764332110
Q ss_pred -------hc------------------------------------hhHHHHHHHHHHHHh--hCCceEEecccccccccc
Q 014743 236 -------IG------------------------------------EGSRMVRELFVMARE--HAPSIIFMDEIDSIGSAR 270 (419)
Q Consensus 236 -------~g------------------------------------~~~~~i~~lf~~a~~--~~psVl~iDEiD~l~~~r 270 (419)
+. .....+..++..... ..+.++++||++.+....
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~id~~~~~~~~~ 152 (283)
T d2fnaa2 73 YKDFLLELQKEINKLVKRLPSLLKALKNIQGIVIMGNEIKFNWNRKDRLSFANLLESFEQASKDNVIIVLDEAQELVKLR 152 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTHHHHTTTSTTEEECSSSEEEC-----CCCHHHHHHHHHHTCSSCEEEEEETGGGGGGCT
T ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHHhhhcccccccccccccchhhhhHHHHHHHHHHhhcccccccccchhhhhcccc
Confidence 00 001112334433322 456789999999975432
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHccccccCCCeEEEEEeCCcchhhHHhcC-------CCceeEEEEcCCCCHHHHHHHHH
Q 014743 271 MESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLR-------PGRIDRKIEFPNPNEESRLDILK 343 (419)
Q Consensus 271 ~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~~ld~allr-------~gRfd~~I~~~~P~~~~r~~Il~ 343 (419)
. ..+...+..+.. ...++..++++.....+...+.. .+|+...+.+++.+.++..+++.
T Consensus 153 ~--------~~~~~~l~~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~L~~l~~~e~~~~l~ 218 (283)
T d2fnaa2 153 G--------VNLLPALAYAYD------NLKRIKFIMSGSEMGLLYDYLRVEDPESPLFGRAFSTVELKPFSREEAIEFLR 218 (283)
T ss_dssp T--------CCCHHHHHHHHH------HCTTEEEEEEESSHHHHHHHTTTTCTTSTTTTCCCEEEEECCCCHHHHHHHHH
T ss_pred h--------HHHHHHHHHHHH------hhhhhhhhhccccchHHHHHHHhhhhcchhcccceeEEeeCCCCHHHHHHHHH
Confidence 1 112233333322 23456666666654433322211 23667789999999999999998
Q ss_pred HHHhhcccCCCCCHHHHHHHcCCCCHHHHHHHHHHH
Q 014743 344 IHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEA 379 (419)
Q Consensus 344 ~~~~~~~~~~~~dl~~la~~t~G~sgadi~~l~~~A 379 (419)
..+....+.. -+...+.+.+.|. +..|..++...
T Consensus 219 ~~~~~~~~~~-~~~~~i~~~~~G~-P~~L~~~~~~~ 252 (283)
T d2fnaa2 219 RGFQEADIDF-KDYEVVYEKIGGI-PGWLTYFGFIY 252 (283)
T ss_dssp HHHHHHTCCC-CCHHHHHHHHCSC-HHHHHHHHHHH
T ss_pred hhhhhcCCCH-HHHHHHHHHhCCC-HHHHHHHHHHH
Confidence 8777665543 3477888999985 66777666543
No 34
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=99.04 E-value=3.4e-10 Score=103.35 Aligned_cols=114 Identities=25% Similarity=0.312 Sum_probs=81.1
Q ss_pred hcCCCCCCeEEEEcCCCChHHHHHHHHHhcc--CCceEEEeCcch-----------------------------------
Q 014743 189 SLGIAQPKGVLLYGPPGTGKTLLARAVAHHT--DCTFIRVSGSEL----------------------------------- 231 (419)
Q Consensus 189 ~~gi~~p~~iLL~GPpGtGKT~LakalA~~~--~~~~i~v~~s~l----------------------------------- 231 (419)
++.+.++..+.|.||+|||||||+++|++-. ...-+.+++.++
T Consensus 20 s~~i~~Ge~~~liGpsGaGKSTll~~l~Gl~~p~sG~I~~~G~~i~~~~~~~r~ig~v~Q~~~l~~~~tV~enl~~~~~~ 99 (229)
T d3d31a2 20 SLKVESGEYFVILGPTGAGKTLFLELIAGFHVPDSGRILLDGKDVTDLSPEKHDIAFVYQNYSLFPHMNVKKNLEFGMRM 99 (229)
T ss_dssp EEEECTTCEEEEECCCTHHHHHHHHHHHTSSCCSEEEEEETTEECTTSCHHHHTCEEECTTCCCCTTSCHHHHHHHHHHH
T ss_pred EEEECCCCEEEEECCCCCcHHHHHHHHhcCcCCCCCEEEEccEeccccchhHhcceeeccccccCccccHHHHHHHHHhh
Confidence 3456788889999999999999999999853 233444444222
Q ss_pred ---------------------hhhhhchhHHHHHHHHHHH--HhhCCceEEecccccccccccCCCCCCCCHHHHHHHHH
Q 014743 232 ---------------------VQKYIGEGSRMVRELFVMA--REHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLE 288 (419)
Q Consensus 232 ---------------------~~~~~g~~~~~i~~lf~~a--~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~ 288 (419)
..+++++.++..++-...| ..+.|.||++|| |+++.|+.....+.+
T Consensus 100 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSGG~~QRvaiAraL~~~P~iLllDE-----------Pts~LD~~~~~~i~~ 168 (229)
T d3d31a2 100 KKIKDPKRVLDTARDLKIEHLLDRNPLTLSGGEQQRVALARALVTNPKILLLDE-----------PLSALDPRTQENARE 168 (229)
T ss_dssp HCCCCHHHHHHHHHHTTCTTTTTSCGGGSCHHHHHHHHHHHHTTSCCSEEEEES-----------SSTTSCHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHhcchhhHhCChhhCCHHHhcchhhhhhhhccCCceeecC-----------CCcCCCHHHHHHHHH
Confidence 1123334344444444444 457899999999 888899999999999
Q ss_pred HHHHccccccCCCeEEEEEeCCcchhhH
Q 014743 289 LLNQLDGFEASNKIKVLMATNRIDILDQ 316 (419)
Q Consensus 289 lL~~l~~~~~~~~v~VI~tTn~~~~ld~ 316 (419)
++..+. ...++.||++||+++....
T Consensus 169 ~l~~l~---~~~g~tii~vtHd~~~~~~ 193 (229)
T d3d31a2 169 MLSVLH---KKNKLTVLHITHDQTEARI 193 (229)
T ss_dssp HHHHHH---HHTTCEEEEEESCHHHHHH
T ss_pred HHHHHH---hcCCcEEEEEcCCHHHHHH
Confidence 988873 3457889999999875543
No 35
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=99.02 E-value=2.2e-10 Score=105.24 Aligned_cols=113 Identities=23% Similarity=0.257 Sum_probs=78.9
Q ss_pred hcCCCCCCeEEEEcCCCChHHHHHHHHHhcc--CCceEEEeCcch-----------------------------------
Q 014743 189 SLGIAQPKGVLLYGPPGTGKTLLARAVAHHT--DCTFIRVSGSEL----------------------------------- 231 (419)
Q Consensus 189 ~~gi~~p~~iLL~GPpGtGKT~LakalA~~~--~~~~i~v~~s~l----------------------------------- 231 (419)
++.+.++..+.|.||+|||||||++.|++.. ...-+.+++.++
T Consensus 26 sl~v~~Ge~~~liGpsGaGKSTLl~~i~Gl~~p~sG~I~i~g~~i~~~~~~~r~ig~v~Q~~~l~~~ltv~enl~~~~~~ 105 (239)
T d1v43a3 26 NLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPKDRNISMVFQSYAVWPHMTVYENIAFPLKI 105 (239)
T ss_dssp EEEECTTCEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSCGGGGTEEEEEC------CCCHHHHHHTTCC-
T ss_pred eEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCEEEEcceecccCCcccceEEEEeechhhcccchHHHHHHHHHHH
Confidence 3456788889999999999999999999744 233444444221
Q ss_pred ------------------------hhhhhchhHHH--HHHHHHHHHhhCCceEEecccccccccccCCCCCCCCHHHHHH
Q 014743 232 ------------------------VQKYIGEGSRM--VRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRT 285 (419)
Q Consensus 232 ------------------------~~~~~g~~~~~--i~~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~ 285 (419)
..+++.+.++. .|-.+..|....|.||++|| |+++.|+.....
T Consensus 106 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSGGq~QRvaiAraL~~~P~iLllDE-----------Pts~LD~~~~~~ 174 (239)
T d1v43a3 106 KKFPKDEIDKRVRWAAELLQIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDE-----------PLSNLDAKLRVA 174 (239)
T ss_dssp -CCCHHHHHHHHHHHHHHTTCGGGTTSCTTTCCSSCHHHHHHHHHHTTCCSEEEEES-----------TTTTSCHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHhhhccCCCceeecC-----------CcccCCHHHHHH
Confidence 01112221121 23344445567899999999 888899999999
Q ss_pred HHHHHHHccccccCCCeEEEEEeCCcchhh
Q 014743 286 MLELLNQLDGFEASNKIKVLMATNRIDILD 315 (419)
Q Consensus 286 l~~lL~~l~~~~~~~~v~VI~tTn~~~~ld 315 (419)
+++++.++. ...++.||++||+.+..-
T Consensus 175 i~~ll~~l~---~~~g~tii~vTHd~~~a~ 201 (239)
T d1v43a3 175 MRAEIKKLQ---QKLKVTTIYVTHDQVEAM 201 (239)
T ss_dssp HHHHHHHHH---HHHTCEEEEEESCHHHHH
T ss_pred HHHHHHHHH---HhcCCeEEEEeCCHHHHH
Confidence 999998873 334788999999987653
No 36
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.01 E-value=2.9e-10 Score=104.08 Aligned_cols=114 Identities=19% Similarity=0.178 Sum_probs=73.9
Q ss_pred hcCCCCCCeEEEEcCCCChHHHHHHHHHhcc--CCceEEEeCcch-----------------------------------
Q 014743 189 SLGIAQPKGVLLYGPPGTGKTLLARAVAHHT--DCTFIRVSGSEL----------------------------------- 231 (419)
Q Consensus 189 ~~gi~~p~~iLL~GPpGtGKT~LakalA~~~--~~~~i~v~~s~l----------------------------------- 231 (419)
++.+.++..+.|.||+|||||||++.+++-. ...-+.+++.++
T Consensus 20 sl~i~~Gei~~liGpsGsGKSTLl~~i~Gl~~p~sG~I~i~g~~i~~~~~~~r~ig~v~Q~~~l~~~~tv~eni~~~~~~ 99 (232)
T d2awna2 20 NLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKL 99 (232)
T ss_dssp EEEECTTCEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEESSSCCTTSCGGGTCEEEECSSCCC----------------
T ss_pred EEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCCEEEECCEECCCCchhhceeeeeccccccccchhHHHHHHHHHHH
Confidence 3456788889999999999999999999743 222333333211
Q ss_pred ------------------------hhhhhchhHHHHH--HHHHHHHhhCCceEEecccccccccccCCCCCCCCHHHHHH
Q 014743 232 ------------------------VQKYIGEGSRMVR--ELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRT 285 (419)
Q Consensus 232 ------------------------~~~~~g~~~~~i~--~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~ 285 (419)
..+++.+.++..+ -.+..|..+.|.||++|| |+++.|+.....
T Consensus 100 ~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~LSGGqkQRvaiAraL~~~P~illlDE-----------Pts~LD~~~~~~ 168 (232)
T d2awna2 100 AGAKKEVINQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDE-----------PLSNLDAALRVQ 168 (232)
T ss_dssp -----CHHHHHHHHHHHHC---------------------CHHHHHHTCCSEEEEES-----------TTTTSCHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHhCCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcC-----------CCCCCCHHHHHH
Confidence 1112222222222 233345567899999999 888899999888
Q ss_pred HHHHHHHccccccCCCeEEEEEeCCcchhhH
Q 014743 286 MLELLNQLDGFEASNKIKVLMATNRIDILDQ 316 (419)
Q Consensus 286 l~~lL~~l~~~~~~~~v~VI~tTn~~~~ld~ 316 (419)
++.++..+. ...++.||++||+.+..-.
T Consensus 169 i~~~l~~l~---~~~g~tii~vTHd~~~a~~ 196 (232)
T d2awna2 169 MRIEISRLH---KRLGRTMIYVTHDQVEAMT 196 (232)
T ss_dssp HHHHHHHHH---HHSCCEEEEEESCHHHHHH
T ss_pred HHHHHHHHH---HhcCCEEEEEeCCHHHHHH
Confidence 888887763 3457889999999875543
No 37
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.01 E-value=9.4e-10 Score=100.51 Aligned_cols=111 Identities=21% Similarity=0.323 Sum_probs=78.3
Q ss_pred hcCCCCCCeEEEEcCCCChHHHHHHHHHhcc--CCceEEEeCcch-----------------------------------
Q 014743 189 SLGIAQPKGVLLYGPPGTGKTLLARAVAHHT--DCTFIRVSGSEL----------------------------------- 231 (419)
Q Consensus 189 ~~gi~~p~~iLL~GPpGtGKT~LakalA~~~--~~~~i~v~~s~l----------------------------------- 231 (419)
++.+..+..+.|.||+|||||||++.+++-. ...-+.+++.++
T Consensus 25 sl~i~~Ge~~~iiG~sGsGKSTLl~~i~gl~~p~sG~I~~~g~~i~~~~~~~~~~~r~~~ig~v~Q~~~l~~~~tv~eni 104 (230)
T d1l2ta_ 25 NLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIPLLTALENV 104 (230)
T ss_dssp EEEECTTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEECTTCCHHHHHHHHHHHEEEECTTCCCCTTSCHHHHH
T ss_pred EEEEcCCCEEEEECCCCCCcchhhHhccCCCCCCcceeEECCEEcCcCChhhcchhhcceEEEEecchhhCcCccHHHHH
Confidence 4556788899999999999999999999743 223344433211
Q ss_pred ----------------------------------hhhhhchhHHHHHH--HHHHHHhhCCceEEecccccccccccCCCC
Q 014743 232 ----------------------------------VQKYIGEGSRMVRE--LFVMAREHAPSIIFMDEIDSIGSARMESGS 275 (419)
Q Consensus 232 ----------------------------------~~~~~g~~~~~i~~--lf~~a~~~~psVl~iDEiD~l~~~r~~~~~ 275 (419)
...|+.+.+++.++ .+..|....|.||++|| |+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~p~~LSGGqkQRvaIAraL~~~P~lLllDE-----------PT 173 (230)
T d1l2ta_ 105 ELPLIFKYRGAMSGEERRKRALECLKMAELEERFANHKPNQLSGGQQQRVAIARALANNPPIILADQ-----------PT 173 (230)
T ss_dssp HHHHHTCCSSCCCHHHHHHHHHHHHHHTTCCGGGTTCCGGGSCHHHHHHHHHHHHHTTCCSEEEEES-----------TT
T ss_pred hHHHHHhccCCCCHHHHHHHHHHHHHhhchhhhhhcCChhhCCHHHHHHHHHHhhhhcCCCEEEecC-----------Cc
Confidence 11123333333333 33445557899999999 88
Q ss_pred CCCCHHHHHHHHHHHHHccccccCCCeEEEEEeCCcch
Q 014743 276 GNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDI 313 (419)
Q Consensus 276 ~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~~ 313 (419)
++.|+..+..++++|..+. ...++.||++||+++.
T Consensus 174 s~LD~~~~~~i~~~l~~l~---~~~g~tii~vTHd~~~ 208 (230)
T d1l2ta_ 174 GALDSKTGEKIMQLLKKLN---EEDGKTVVVVTHDINV 208 (230)
T ss_dssp TTSCHHHHHHHHHHHHHHH---HTTCCEEEEECSCHHH
T ss_pred cccCHHHHHHHHHHHHHHH---HhhCCEEEEECCCHHH
Confidence 8899999999999998873 3458899999997653
No 38
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=99.01 E-value=4.5e-10 Score=103.30 Aligned_cols=113 Identities=23% Similarity=0.227 Sum_probs=79.0
Q ss_pred hcCCCCCCeEEEEcCCCChHHHHHHHHHhcc--CCceEEEeCcch-----------------------------------
Q 014743 189 SLGIAQPKGVLLYGPPGTGKTLLARAVAHHT--DCTFIRVSGSEL----------------------------------- 231 (419)
Q Consensus 189 ~~gi~~p~~iLL~GPpGtGKT~LakalA~~~--~~~~i~v~~s~l----------------------------------- 231 (419)
++.++++..+.|.||+|||||||+++|++-. ...-+.+++.++
T Consensus 23 sl~i~~Ge~~~liG~sGaGKSTll~~i~gl~~p~sG~I~~~g~~i~~~~~~~~~~~~~r~ig~v~Q~~~L~~~ltV~eni 102 (240)
T d1g2912 23 SLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIYIGDKLVADPEKGIFVPPKDRDIAMVFQSYALYPHMTVYDNI 102 (240)
T ss_dssp EEEEETTCEEEEECSTTSSHHHHHHHHHTSSCCSEEEEEETTEEEEEGGGTEECCGGGSSEEEECSCCCCCTTSCHHHHH
T ss_pred eeEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCCEEEECCEEecccchhhhcccccccceecccchhhcchhhhhHhh
Confidence 3456778889999999999999999999743 222333332111
Q ss_pred ------------------------------hhhhhchhHHHHHH--HHHHHHhhCCceEEecccccccccccCCCCCCCC
Q 014743 232 ------------------------------VQKYIGEGSRMVRE--LFVMAREHAPSIIFMDEIDSIGSARMESGSGNGD 279 (419)
Q Consensus 232 ------------------------------~~~~~g~~~~~i~~--lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~ 279 (419)
..+|+++.+++.++ .+..|..+.|.|||+|| |+++.|
T Consensus 103 ~~~~~~~~~~~~e~~~~v~~~l~~~~l~~~~~~~p~~LSGGqkQRv~IAraL~~~P~iLllDE-----------Pt~~LD 171 (240)
T d1g2912 103 AFPLKLRKVPRQEIDQRVREVAELLGLTELLNRKPRELSGGQRQRVALGRAIVRKPQVFLMDE-----------PLSNLD 171 (240)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHTCGGGTTCCGGGSCHHHHHHHHHHHHHHTCCSEEEEEC-----------TTTTSC
T ss_pred hhhHHHcCCCHHHHHHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEecC-----------CCcccC
Confidence 11233343343333 34445568899999999 788899
Q ss_pred HHHHHHHHHHHHHccccccCCCeEEEEEeCCcchhh
Q 014743 280 SEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILD 315 (419)
Q Consensus 280 ~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~~ld 315 (419)
+.....+++++.++. ...++.||++||+.+.+-
T Consensus 172 ~~~~~~i~~~l~~l~---~~~g~tvi~vTHd~~~~~ 204 (240)
T d1g2912 172 AKLRVRMRAELKKLQ---RQLGVTTIYVTHDQVEAM 204 (240)
T ss_dssp HHHHHHHHHHHHHHH---HHHTCEEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHHHH---hccCCEEEEEcCCHHHHH
Confidence 999999999988773 234788999999987653
No 39
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=98.98 E-value=5.4e-10 Score=102.96 Aligned_cols=113 Identities=19% Similarity=0.220 Sum_probs=79.1
Q ss_pred hcCCCCCCeEEEEcCCCChHHHHHHHHHhcc--CCceEEEeCcchh----------------------------------
Q 014743 189 SLGIAQPKGVLLYGPPGTGKTLLARAVAHHT--DCTFIRVSGSELV---------------------------------- 232 (419)
Q Consensus 189 ~~gi~~p~~iLL~GPpGtGKT~LakalA~~~--~~~~i~v~~s~l~---------------------------------- 232 (419)
++.++++.-+.|.||+|+|||||.++|++.. ...-+.+++.++.
T Consensus 26 s~~i~~Gei~~liGpnGaGKSTl~~~i~Gl~~p~~G~I~~~G~~i~~~~~~~~~r~gi~~~~q~~~l~~~ltv~en~~~~ 105 (240)
T d1ji0a_ 26 DLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKPAHVINRMGIALVPEGRRIFPELTVYENLMMG 105 (240)
T ss_dssp EEEEETTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEECTTCCHHHHHHTTEEEECSSCCCCTTSBHHHHHHGG
T ss_pred eEEECCCCEEEEECCCCCcHHHHHHHHhCCCCCCccEEEecccccccccHHHHHHhcccccCcccccCCcccHHHHHHHH
Confidence 3456788889999999999999999999754 2233444432210
Q ss_pred ----------------------------hhhhchhHHHHHHHH--HHHHhhCCceEEecccccccccccCCCCCCCCHHH
Q 014743 233 ----------------------------QKYIGEGSRMVRELF--VMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEV 282 (419)
Q Consensus 233 ----------------------------~~~~g~~~~~i~~lf--~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~ 282 (419)
.+++++.++..++.. ..|....|.+|++|| |+++.|+..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~LSGG~~Qrv~iAraL~~~P~lLllDE-----------Pt~gLD~~~ 174 (240)
T d1ji0a_ 106 AYNRKDKEGIKRDLEWIFSLFPRLKERLKQLGGTLSGGEQQMLAIGRALMSRPKLLMMDE-----------PSLGLAPIL 174 (240)
T ss_dssp GTTCCCSSHHHHHHHHHHHHCHHHHTTTTSBSSSSCHHHHHHHHHHHHHTTCCSEEEEEC-----------TTTTCCHHH
T ss_pred HHhcCCHHHHHHHHHHHHHHhhChHHHHhCchhhCCHHHHHHHHHHHHHHhCCCEeeecC-----------CCcCCCHHH
Confidence 111223333333333 344557899999999 888999999
Q ss_pred HHHHHHHHHHccccccCCCeEEEEEeCCcchhhH
Q 014743 283 QRTMLELLNQLDGFEASNKIKVLMATNRIDILDQ 316 (419)
Q Consensus 283 ~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~~ld~ 316 (419)
...+++++.++. ..++.||++||+.+.+..
T Consensus 175 ~~~i~~~i~~l~----~~g~til~~tH~l~~~~~ 204 (240)
T d1ji0a_ 175 VSEVFEVIQKIN----QEGTTILLVEQNALGALK 204 (240)
T ss_dssp HHHHHHHHHHHH----HTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHH----hCCCEEEEEeCCHHHHHH
Confidence 999999999873 346789999999876543
No 40
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=98.96 E-value=4.9e-10 Score=103.03 Aligned_cols=112 Identities=18% Similarity=0.286 Sum_probs=78.3
Q ss_pred hcCCCCCCeEEEEcCCCChHHHHHHHHHhcc--CCceEEEeCcc------------------------------------
Q 014743 189 SLGIAQPKGVLLYGPPGTGKTLLARAVAHHT--DCTFIRVSGSE------------------------------------ 230 (419)
Q Consensus 189 ~~gi~~p~~iLL~GPpGtGKT~LakalA~~~--~~~~i~v~~s~------------------------------------ 230 (419)
++.+..+..+.|.||+|||||||+++|++-. ...-+.+++.+
T Consensus 25 sl~i~~Ge~~~iiG~sGsGKSTll~~i~gl~~p~~G~I~~~g~~i~~~~~~~~~~~rr~ig~vfQ~~~L~p~ltv~eni~ 104 (242)
T d1oxxk2 25 NINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFENIA 104 (242)
T ss_dssp EEEECTTCEEEEECSCHHHHHHHHHHHHTSSCCSEEEEEETTEEEEETTEESSCGGGSCEEEEETTSCCCTTSCHHHHHH
T ss_pred EEEECCCCEEEEECCCCCcHHHHHHHHHcCcCCCCceEEECCEEeecCchhhcchhhccceEEeccccccccccHHHHhh
Confidence 3456788899999999999999999999732 11222222211
Q ss_pred ----------------------------hhhhhhchhHHHHHHHHHH--HHhhCCceEEecccccccccccCCCCCCCCH
Q 014743 231 ----------------------------LVQKYIGEGSRMVRELFVM--AREHAPSIIFMDEIDSIGSARMESGSGNGDS 280 (419)
Q Consensus 231 ----------------------------l~~~~~g~~~~~i~~lf~~--a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~ 280 (419)
+..+++++.++..++-... |..+.|.|||+|| |+++.|+
T Consensus 105 ~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~p~~LSGGqkQRvaiARaL~~~P~llllDE-----------Pt~~LD~ 173 (242)
T d1oxxk2 105 FPLTNMKMSKEEIRKRVEEVAKILDIHHVLNHFPRELSGAQQQRVALARALVKDPSLLLLDE-----------PFSNLDA 173 (242)
T ss_dssp GGGTTSSCCHHHHHHHHHHHHHHTTCGGGTTSCGGGSCHHHHHHHHHHHHHTTCCSEEEEES-----------TTTTSCG
T ss_pred hhhHhhcCCHHHHHHHHHHHHhhcChHhhhhCChhhCCHHHHhHHHHHhHHhhcccceeecC-----------CccCCCH
Confidence 1122444444444444444 4457899999999 7788999
Q ss_pred HHHHHHHHHHHHccccccCCCeEEEEEeCCcchh
Q 014743 281 EVQRTMLELLNQLDGFEASNKIKVLMATNRIDIL 314 (419)
Q Consensus 281 ~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~~l 314 (419)
.....+..++.++. ...++.||++||+++.+
T Consensus 174 ~~~~~i~~~i~~l~---~~~g~tvi~vTHd~~~~ 204 (242)
T d1oxxk2 174 RMRDSARALVKEVQ---SRLGVTLLVVSHDPADI 204 (242)
T ss_dssp GGHHHHHHHHHHHH---HHHCCEEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHH---hccCCEEEEEECCHHHH
Confidence 98888888888773 33478899999997755
No 41
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=98.93 E-value=2e-09 Score=99.00 Aligned_cols=112 Identities=21% Similarity=0.303 Sum_probs=78.1
Q ss_pred hcCCCCCCeEEEEcCCCChHHHHHHHHHhcc--CCceEEEeCcch-----------------------------------
Q 014743 189 SLGIAQPKGVLLYGPPGTGKTLLARAVAHHT--DCTFIRVSGSEL----------------------------------- 231 (419)
Q Consensus 189 ~~gi~~p~~iLL~GPpGtGKT~LakalA~~~--~~~~i~v~~s~l----------------------------------- 231 (419)
++.+.++.-+.|.||+|+|||||.++|++.. ...-+.+++.++
T Consensus 22 s~~v~~Gei~glvG~nGaGKSTLl~~l~G~~~p~~G~i~i~G~~i~~~~~~~~~~i~~vpq~~~~~~~ltv~e~l~~~~~ 101 (238)
T d1vpla_ 22 SFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVFGKNVVEEPHEVRKLISYLPEEAGAYRNMQGIEYLRFVAG 101 (238)
T ss_dssp EEEECTTCEEEEECCTTSSHHHHHHHHTTSSCCSEEEEEETTEETTTCHHHHHTTEEEECTTCCCCTTSBHHHHHHHHHH
T ss_pred eeEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCCEEEECcEecccChHHHHhhEeEeeeccccCCCccHHHHHHHHHH
Confidence 3456788889999999999999999999854 223344433221
Q ss_pred -------------------------hhhhhchhHHHHHH--HHHHHHhhCCceEEecccccccccccCCCCCCCCHHHHH
Q 014743 232 -------------------------VQKYIGEGSRMVRE--LFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQR 284 (419)
Q Consensus 232 -------------------------~~~~~g~~~~~i~~--lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~ 284 (419)
..++++...+..++ .+..|....|.||++|| |+++.|+...+
T Consensus 102 ~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~lSgG~~qrv~iA~al~~~p~illLDE-----------Pt~gLD~~~~~ 170 (238)
T d1vpla_ 102 FYASSSSEIEEMVERATEIAGLGEKIKDRVSTYSKGMVRKLLIARALMVNPRLAILDE-----------PTSGLDVLNAR 170 (238)
T ss_dssp HHCCCHHHHHHHHHHHHHHHCCGGGGGSBGGGCCHHHHHHHHHHHHHTTCCSEEEEES-----------TTTTCCHHHHH
T ss_pred hcCCCHHHHHHHHHHHHHhCCCHHHHhhhhhhCCHHHHHHHHHHHHHhcCCCEEEecC-----------CCCCCCHHHHH
Confidence 01112222233333 33445567899999999 78889999999
Q ss_pred HHHHHHHHccccccCCCeEEEEEeCCcchhh
Q 014743 285 TMLELLNQLDGFEASNKIKVLMATNRIDILD 315 (419)
Q Consensus 285 ~l~~lL~~l~~~~~~~~v~VI~tTn~~~~ld 315 (419)
.+++++.++. ..+..||++||..+.+.
T Consensus 171 ~i~~~i~~~~----~~g~tii~~tH~l~~~~ 197 (238)
T d1vpla_ 171 EVRKILKQAS----QEGLTILVSSHNMLEVE 197 (238)
T ss_dssp HHHHHHHHHH----HTTCEEEEEECCHHHHT
T ss_pred HHHHHHHHHH----hcCCEEEEEeCCHHHHH
Confidence 9999998873 34688999999987654
No 42
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=98.93 E-value=7.5e-10 Score=101.77 Aligned_cols=113 Identities=25% Similarity=0.355 Sum_probs=79.6
Q ss_pred hcCCCCCCeEEEEcCCCChHHHHHHHHHhcc--CCceEEEeCcch-----------------------------------
Q 014743 189 SLGIAQPKGVLLYGPPGTGKTLLARAVAHHT--DCTFIRVSGSEL----------------------------------- 231 (419)
Q Consensus 189 ~~gi~~p~~iLL~GPpGtGKT~LakalA~~~--~~~~i~v~~s~l----------------------------------- 231 (419)
++.+..+..+.|.||+|||||||+++|++-. ...-+.+++.++
T Consensus 25 sl~i~~Ge~~~iiG~sGsGKSTLl~~i~Gl~~p~sG~I~~~g~~i~~~~~~~~~~~rr~ig~VfQ~~~l~~~~tv~eni~ 104 (240)
T d3dhwc1 25 SLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVA 104 (240)
T ss_dssp EEEECSSCEEEEEESTTSSHHHHHHHHTTSSCCSEEEEEETTEEECTTCHHHHHHHHHHEEECCSSCCCCTTSBHHHHHH
T ss_pred eEEEcCCCEEEEECCCCCCHHHHHHHHcCCccccCCceEEcCeEeeeCChhhhhhhhccccccccccccCCCccHHHHHH
Confidence 3456778889999999999999999999743 223344443221
Q ss_pred -----------------------------hhhhhchhHHHHH--HHHHHHHhhCCceEEecccccccccccCCCCCCCCH
Q 014743 232 -----------------------------VQKYIGEGSRMVR--ELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDS 280 (419)
Q Consensus 232 -----------------------------~~~~~g~~~~~i~--~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~ 280 (419)
..+|+++.++..+ -.+..|..+.|.||++|| |+++.|+
T Consensus 105 ~~l~~~~~~~~~~~~~v~~~L~~vgL~~~~~~~~~~LSGG~~QRvaiAraL~~~P~lLllDE-----------Pt~~LD~ 173 (240)
T d3dhwc1 105 LPLELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDE-----------ATSALDP 173 (240)
T ss_dssp HHHHTTTCCTTHHHHHHHHHHHHHSTTTTTSSCBSCCCHHHHHHHHHHHHHHTCCSEEEEES-----------GGGSSCH
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCChhhCCHHHHHHHHHhhhhccCCCeEEecc-----------ccccCCH
Confidence 1112333333333 334445568899999999 7778999
Q ss_pred HHHHHHHHHHHHccccccCCCeEEEEEeCCcchhh
Q 014743 281 EVQRTMLELLNQLDGFEASNKIKVLMATNRIDILD 315 (419)
Q Consensus 281 ~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~~ld 315 (419)
.....+.++|.++. ...++.||++||+.+.+.
T Consensus 174 ~~~~~i~~~l~~l~---~~~g~tvi~vTHdl~~~~ 205 (240)
T d3dhwc1 174 ATTRSILELLKDIN---RRLGLTILLITHEMDVVK 205 (240)
T ss_dssp HHHHHHHHHHHHHH---HHHCCEEEEEBSCHHHHH
T ss_pred HHhhHHHHHHHHHH---hccCCEEEEEcCCHHHHH
Confidence 99999999998873 334788999999987654
No 43
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=98.89 E-value=4e-09 Score=97.73 Aligned_cols=111 Identities=27% Similarity=0.387 Sum_probs=75.5
Q ss_pred hcCCCCCCeEEEEcCCCChHHHHHHHHHhcc--CCceEEEeCcch-----------------------------------
Q 014743 189 SLGIAQPKGVLLYGPPGTGKTLLARAVAHHT--DCTFIRVSGSEL----------------------------------- 231 (419)
Q Consensus 189 ~~gi~~p~~iLL~GPpGtGKT~LakalA~~~--~~~~i~v~~s~l----------------------------------- 231 (419)
++.++++..+.|.||+|||||||+++|++.. ...-+.+++.++
T Consensus 35 sl~i~~Ge~iaivG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~~n~~~~~~ 114 (253)
T d3b60a1 35 NLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYART 114 (253)
T ss_dssp EEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEEEETTEETTTBCHHHHHHTEEEECSSCCCCSSBHHHHHHTTTT
T ss_pred EEEEcCCCEEEEECCCCChHHHHHHHHhcccCCCccEEEECCcccchhhhhhhhheEEEEeeccccCCcchhhhhhhcCc
Confidence 3456788899999999999999999999754 223444443211
Q ss_pred --------------------hhh-------hhc----hhHHHH--HHHHHHHHhhCCceEEecccccccccccCCCCCCC
Q 014743 232 --------------------VQK-------YIG----EGSRMV--RELFVMAREHAPSIIFMDEIDSIGSARMESGSGNG 278 (419)
Q Consensus 232 --------------------~~~-------~~g----~~~~~i--~~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~ 278 (419)
+.. .++ ...+.. |-.+++|....|.|+++|| ++++.
T Consensus 115 ~~~~~~~i~~a~~~~~l~~~i~~l~~gl~t~~~~~~~~LSGGqkQRvaiARal~~~p~ililDE-----------pts~L 183 (253)
T d3b60a1 115 EEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQRQRIAIARALLRDSPILILDE-----------ATSAL 183 (253)
T ss_dssp SCCCHHHHHHHHHTTTCHHHHHHSTTGGGSBCCTTSCSSCHHHHHHHHHHHHHHHCCSEEEEET-----------TTSSC
T ss_pred ccCCHHHHHHHHHHHhHHHHHHhccccchhhhcCCCCCcCHHHHHHHHHHHHHhcCCCEEEecc-----------ccccC
Confidence 000 011 112222 3334445567899999999 67789
Q ss_pred CHHHHHHHHHHHHHccccccCCCeEEEEEeCCcchhh
Q 014743 279 DSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILD 315 (419)
Q Consensus 279 ~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~~ld 315 (419)
|+.....+.++|..+. .+.+||+.||+++.+.
T Consensus 184 D~~~~~~i~~~l~~l~-----~~~Tvi~itH~l~~~~ 215 (253)
T d3b60a1 184 DTESERAIQAALDELQ-----KNRTSLVIAHRLSTIE 215 (253)
T ss_dssp CHHHHHHHHHHHHHHH-----TTSEEEEECSCGGGTT
T ss_pred CHHHHHHHHHHHHHhc-----cCCEEEEEECCHHHHH
Confidence 9999999999998873 2557888899987653
No 44
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=98.88 E-value=2.9e-09 Score=97.47 Aligned_cols=113 Identities=20% Similarity=0.225 Sum_probs=78.5
Q ss_pred hcCCCCCCeEEEEcCCCChHHHHHHHHHhcc-CCceEEEeCcch------------------------------------
Q 014743 189 SLGIAQPKGVLLYGPPGTGKTLLARAVAHHT-DCTFIRVSGSEL------------------------------------ 231 (419)
Q Consensus 189 ~~gi~~p~~iLL~GPpGtGKT~LakalA~~~-~~~~i~v~~s~l------------------------------------ 231 (419)
++.+.++..+.|.||+|+|||||.++|++.. +..-+.+++.++
T Consensus 19 sl~I~~Gei~~iiG~nGaGKSTLl~~l~Gl~~~~G~I~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 98 (231)
T d1l7vc_ 19 SGEVRAGEILHLVGPNGAGKSTLLARMAGMTSGKGSIQFAGQPLEAWSATKLALHRAYLSQQQTPPFATPVWHYLTLHQH 98 (231)
T ss_dssp EEEEETTCEEECBCCTTSSHHHHHHHHHTSCCCSSEEEESSSBGGGSCHHHHHHHEEEECSCCCCCSSCBHHHHHHHHCS
T ss_pred EEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCceEEEECCEECCcCCHHHHHhhceeeeccccCCccccHHHHhhhccc
Confidence 4456788899999999999999999999743 223344444321
Q ss_pred --------------------hhhhhchhHHHHHHHHHHHHhh---------CCceEEecccccccccccCCCCCCCCHHH
Q 014743 232 --------------------VQKYIGEGSRMVRELFVMAREH---------APSIIFMDEIDSIGSARMESGSGNGDSEV 282 (419)
Q Consensus 232 --------------------~~~~~g~~~~~i~~lf~~a~~~---------~psVl~iDEiD~l~~~r~~~~~~~~~~~~ 282 (419)
..++++...+..++....|+.. .|.||++|| |+++.|+..
T Consensus 99 ~~~~~~~~~~~~~~~~l~~~~~~~~~~LSgG~~Qrv~iA~al~~~~p~~~p~p~llllDE-----------Pt~gLD~~~ 167 (231)
T d1l7vc_ 99 DKTRTELLNDVAGALALDDKLGRSTNQLSGGEWQRVRLAAVVLQITPQANPAGQLLLLDE-----------PMNSLDVAQ 167 (231)
T ss_dssp CTTCHHHHHHHHHHTTCTTTTTSBGGGCCHHHHHHHHHHHHHHHHCTTTCTTCCEEEESS-----------CSTTCCHHH
T ss_pred hhhHHHHHHHHHHhcCCHhHhCcChhhcCHHHHHHHHHHHHHHhhCcccCCCCCEEEEcC-----------CCCCCCHHH
Confidence 0112223334444444444432 568999999 788899999
Q ss_pred HHHHHHHHHHccccccCCCeEEEEEeCCcchhhH
Q 014743 283 QRTMLELLNQLDGFEASNKIKVLMATNRIDILDQ 316 (419)
Q Consensus 283 ~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~~ld~ 316 (419)
...+.+++..+. ..++.||++||+.+.+-.
T Consensus 168 ~~~i~~~i~~l~----~~g~tii~vtHdl~~~~~ 197 (231)
T d1l7vc_ 168 QSALDKILSALC----QQGLAIVMSSHDLNHTLR 197 (231)
T ss_dssp HHHHHHHHHHHH----HTTCEEEECCCCHHHHHH
T ss_pred HHHHHHHHHHHH----hCCCEEEEEeCCHHHHHH
Confidence 999999998873 347889999999876544
No 45
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.88 E-value=3.6e-09 Score=97.93 Aligned_cols=112 Identities=20% Similarity=0.270 Sum_probs=76.8
Q ss_pred hcCCCCCCeEEEEcCCCChHHHHHHHHHhccC--CceEEEeCcchhh---------------------------------
Q 014743 189 SLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD--CTFIRVSGSELVQ--------------------------------- 233 (419)
Q Consensus 189 ~~gi~~p~~iLL~GPpGtGKT~LakalA~~~~--~~~i~v~~s~l~~--------------------------------- 233 (419)
++.++++..+.+.||+|||||||++.|++... ..-+.+++.++..
T Consensus 34 sl~i~~Ge~vaivG~sGsGKSTLl~li~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~g~~ 113 (251)
T d1jj7a_ 34 TFTLRPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGKPLPQYEHRYLHRQVAAVGQEPQVFGRSLQENIAYGLT 113 (251)
T ss_dssp EEEECTTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEEGGGBCHHHHHHHEEEECSSCCCCSSBHHHHHHCSCS
T ss_pred EEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCcCEEEECCEecchhhhHHHHHHhhhccccccccCcchhhhhhhhhc
Confidence 35568888999999999999999999997542 2334444422100
Q ss_pred -----------------------------hhhc----hhHHHHH--HHHHHHHhhCCceEEecccccccccccCCCCCCC
Q 014743 234 -----------------------------KYIG----EGSRMVR--ELFVMAREHAPSIIFMDEIDSIGSARMESGSGNG 278 (419)
Q Consensus 234 -----------------------------~~~g----~~~~~i~--~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~ 278 (419)
..++ ...+..+ -.+.+|.-..|.||++|| ++++.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~i~~~~~~LSGGqkQRvaiARal~~~p~ililDE-----------pTs~L 182 (251)
T d1jj7a_ 114 QKPTMEEITAAAVKSGAHSFISGLPQGYDTEVDEAGSQLSGGQRQAVALARALIRKPCVLILDD-----------ATSAL 182 (251)
T ss_dssp SCCCHHHHHHHHHHHTCHHHHHTSTTGGGCBCCSSCSSSCHHHHHHHHHHHHHTTCCSEEEEES-----------TTTTC
T ss_pred ccchHHHHHHHHHHHHHHHHHHhccccchhhHhccCccCChhHceEEEEeeccccCCcEEEecC-----------cCccc
Confidence 0011 1223333 344455567899999999 77789
Q ss_pred CHHHHHHHHHHHHHccccccCCCeEEEEEeCCcchh
Q 014743 279 DSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDIL 314 (419)
Q Consensus 279 ~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~~l 314 (419)
|+.....+.++|.++. ...+.+||++||+.+.+
T Consensus 183 D~~~~~~i~~~l~~l~---~~~~~Tvi~itH~l~~~ 215 (251)
T d1jj7a_ 183 DANSQLQVEQLLYESP---ERYSRSVLLITQHLSLV 215 (251)
T ss_dssp CHHHHHHHHHHHHTCG---GGGGCEEEEECSCHHHH
T ss_pred ChhhHHHHHHHHHHHh---hhcCCEEEEEeCCHHHH
Confidence 9999888888887763 33467899999997655
No 46
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=98.88 E-value=1.2e-08 Score=87.97 Aligned_cols=130 Identities=18% Similarity=0.260 Sum_probs=71.0
Q ss_pred eEEEEcCCCChHHHHHHHHHhccCCceEEEeCc--c---------------------h----------hhhhh-------
Q 014743 197 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGS--E---------------------L----------VQKYI------- 236 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s--~---------------------l----------~~~~~------- 236 (419)
.++|.||||||||||++++++.+......+... . + ..++.
T Consensus 2 ki~I~G~~G~GKSTLl~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (178)
T d1ye8a1 2 KIIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKRTGFRIITTEGKKKIFSSKFFTSKKLVGSYGVNVQYFE 81 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHGGGEEEEEEEEEC------CCEEEEEETTCCEEEEEETTCCCSSEETTEEECHHHHH
T ss_pred EEEEECCCCcHHHHHHHHHHhcCCCCcceEEECCcchHHHHHhhhhhhhhhhHHHHHHhhhhhhhhhhhhhhhcCcchhh
Confidence 589999999999999999998654321111110 0 0 00000
Q ss_pred chhHHHHHHHHHHHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCeEEEEEeCCcchh--
Q 014743 237 GEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDIL-- 314 (419)
Q Consensus 237 g~~~~~i~~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~~l-- 314 (419)
-......+..+..+....|+++++||+..... ........+.+++ ...+..+|++++.....
T Consensus 82 ~~~~~~~~~~l~~~~~~~~~vlllDE~~~~~~---------~~~~~~~~l~~~l-------~~~~~~il~~~h~~~~~~~ 145 (178)
T d1ye8a1 82 ELAIPILERAYREAKKDRRKVIIIDEIGKMEL---------FSKKFRDLVRQIM-------HDPNVNVVATIPIRDVHPL 145 (178)
T ss_dssp HHHHHHHHHHHHHHHHCTTCEEEECCCSTTGG---------GCHHHHHHHHHHH-------TCTTSEEEEECCSSCCSHH
T ss_pred hhhhhhHHHHHHHHHhcCCCceeecCCCccch---------hhHHHHHHHHHHh-------ccCCCEEEEEEccHHHHHh
Confidence 01122345667777889999999999755321 2234444444444 23456788888875422
Q ss_pred hHHhcCCCceeEEEEcCCCCHHH-HHHHHH
Q 014743 315 DQALLRPGRIDRKIEFPNPNEES-RLDILK 343 (419)
Q Consensus 315 d~allr~gRfd~~I~~~~P~~~~-r~~Il~ 343 (419)
-..+.+. .-...+++...+.+. +.+|+.
T Consensus 146 ~~~i~~~-~~~~i~~v~~~nrd~~~~~i~~ 174 (178)
T d1ye8a1 146 VKEIRRL-PGAVLIELTPENRDVILEDILS 174 (178)
T ss_dssp HHHHHTC-TTCEEEECCTTTTTTHHHHHHH
T ss_pred hceEEEE-eCCEEEEECCccHHHHHHHHHH
Confidence 2233321 123455565544332 444443
No 47
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=98.86 E-value=6.8e-09 Score=95.44 Aligned_cols=111 Identities=20% Similarity=0.311 Sum_probs=77.3
Q ss_pred hcCCCCCCeEEEEcCCCChHHHHHHHHHhccC--CceEEEeCcchhh---------------------------------
Q 014743 189 SLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD--CTFIRVSGSELVQ--------------------------------- 233 (419)
Q Consensus 189 ~~gi~~p~~iLL~GPpGtGKT~LakalA~~~~--~~~i~v~~s~l~~--------------------------------- 233 (419)
++.++++..+.+.||+|+|||||+++|++.+. ..-+.+++.++..
T Consensus 23 sl~i~~Ge~vaIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Ti~eNi~~~~~ 102 (241)
T d2pmka1 23 NLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSIIDNISLANP 102 (241)
T ss_dssp EEEEETTCEEEEECSTTSSHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCTTSBHHHHHCTTST
T ss_pred EEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCCCCEEEECCEEecccchhhhhceEEEEecccccCCccccccccccCc
Confidence 34567888999999999999999999998653 3345555432200
Q ss_pred ---------------------h-------hhc----hhHHHH--HHHHHHHHhhCCceEEecccccccccccCCCCCCCC
Q 014743 234 ---------------------K-------YIG----EGSRMV--RELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGD 279 (419)
Q Consensus 234 ---------------------~-------~~g----~~~~~i--~~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~ 279 (419)
. .+| ...++. |-.+.+|....|.||++|| ++++.|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~t~i~~~g~~LSGGq~QRvalARal~~~p~ililDE-----------pts~LD 171 (241)
T d2pmka1 103 GMSVEKVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDE-----------ATSALD 171 (241)
T ss_dssp TCCHHHHHHHHHHHTCHHHHTTSTTGGGSBCSTTTTCCCHHHHHHHHHHHHHTTCCSEEEECC-----------CCSCCC
T ss_pred cccHHHHHHHHHHHhhHHHHHhhhcchhhhcCCCCCccCHHHHHHHhhhhhhhcccchhhhhC-----------CccccC
Confidence 0 011 112223 3344455567899999999 677899
Q ss_pred HHHHHHHHHHHHHccccccCCCeEEEEEeCCcchhh
Q 014743 280 SEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILD 315 (419)
Q Consensus 280 ~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~~ld 315 (419)
+...+.+.+.+..+. .+.+||+.||+++.+.
T Consensus 172 ~~~~~~i~~~l~~l~-----~~~Tvi~itH~l~~~~ 202 (241)
T d2pmka1 172 YESEHVIMRNMHKIC-----KGRTVIIIAHRLSTVK 202 (241)
T ss_dssp HHHHHHHHHHHHHHH-----TTSEEEEECSSGGGGT
T ss_pred HHHHHHHHHHHHHHh-----CCCEEEEEECCHHHHH
Confidence 999999998888763 2567899999988664
No 48
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=98.85 E-value=2.9e-09 Score=97.60 Aligned_cols=107 Identities=20% Similarity=0.277 Sum_probs=74.4
Q ss_pred CeEEEEcCCCChHHHHHHHHHhcc--CCceEEEeCcch------------------------------------------
Q 014743 196 KGVLLYGPPGTGKTLLARAVAHHT--DCTFIRVSGSEL------------------------------------------ 231 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~LakalA~~~--~~~~i~v~~s~l------------------------------------------ 231 (419)
..+.|.||+|||||||++.|++.. ...-+.+++.++
T Consensus 25 e~~~liGpnGaGKSTll~~i~Gl~~p~~G~I~~~G~~i~~~~~~~r~ig~v~Q~~~l~~~ltV~enl~~~l~~~~~~~~~ 104 (240)
T d2onka1 25 DYCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADITPLPPERRGIGFVPQDYALFPHLSVYRNIAYGLRNVERVERD 104 (240)
T ss_dssp SEEEEECCTTSSHHHHHHHHHTSSCCSEEEEEETTEECTTSCTTTSCCBCCCSSCCCCTTSCHHHHHHTTCTTSCHHHHH
T ss_pred EEEEEECCCCChHHHHHHHHHcCCCCCceEEEECCEECCcCCHHHcCceeeccchhhcccchhhHhhhhhhcccCHHHHH
Confidence 356689999999999999999754 223444443221
Q ss_pred ---------------hhhhhchhHHHHHHHH--HHHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHcc
Q 014743 232 ---------------VQKYIGEGSRMVRELF--VMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLD 294 (419)
Q Consensus 232 ---------------~~~~~g~~~~~i~~lf--~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~ 294 (419)
..+++.+.++..++.. ..|..+.|.||++|| |+++.|+.....+.+++.++.
T Consensus 105 ~~v~~~l~~~gl~~~~~~~~~~LSGG~kQRvaiAral~~~P~illlDE-----------Pts~LD~~~~~~i~~~i~~l~ 173 (240)
T d2onka1 105 RRVREMAEKLGIAHLLDRKPARLSGGERQRVALARALVIQPRLLLLDE-----------PLSAVDLKTKGVLMEELRFVQ 173 (240)
T ss_dssp HHHHHHHHTTTCTTTTTCCGGGSCHHHHHHHHHHHHHTTCCSSBEEES-----------TTSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcHhhhhCChhhCCHHHHHHHHHHHHHhccCCceEecC-----------ccccCCHHHHHHHHHHHHHHH
Confidence 1223334444444444 444557899999999 788899999999999988873
Q ss_pred ccccCCCeEEEEEeCCcchhhH
Q 014743 295 GFEASNKIKVLMATNRIDILDQ 316 (419)
Q Consensus 295 ~~~~~~~v~VI~tTn~~~~ld~ 316 (419)
...++.||++||..+.+..
T Consensus 174 ---~~~g~tvi~vtHd~~~~~~ 192 (240)
T d2onka1 174 ---REFDVPILHVTHDLIEAAM 192 (240)
T ss_dssp ---HHHTCCEEEEESCHHHHHH
T ss_pred ---HhcCCeEEEEeCCHHHHHH
Confidence 3346789999999776543
No 49
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=98.80 E-value=1.1e-08 Score=94.87 Aligned_cols=111 Identities=23% Similarity=0.326 Sum_probs=75.3
Q ss_pred hcCCCCCCeEEEEcCCCChHHHHHHHHHhccC--CceEEEeCcchh----------------------------------
Q 014743 189 SLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD--CTFIRVSGSELV---------------------------------- 232 (419)
Q Consensus 189 ~~gi~~p~~iLL~GPpGtGKT~LakalA~~~~--~~~i~v~~s~l~---------------------------------- 232 (419)
++.++++..+.+.||+|||||||++.|++... ..-+.+++.++.
T Consensus 38 sl~i~~Ge~vaivG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Ti~eNi~~g~~ 117 (255)
T d2hyda1 38 NLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRP 117 (255)
T ss_dssp EEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEEEEETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCS
T ss_pred EEEEcCCCEEEEECCCCCcHHHHHHHHHhcCCccccccccCCEEcccCCHHHhhheeeeeeccccCCCCCHHHHHhccCc
Confidence 34567889999999999999999999997542 234444442210
Q ss_pred --------------------hh-------hhch----hHHH--HHHHHHHHHhhCCceEEecccccccccccCCCCCCCC
Q 014743 233 --------------------QK-------YIGE----GSRM--VRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGD 279 (419)
Q Consensus 233 --------------------~~-------~~g~----~~~~--i~~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~ 279 (419)
.. .+|+ ..+. .|-.+.+|....|.|++||| ++++.|
T Consensus 118 ~~~~~~~~~al~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~QRi~iARal~~~p~ililDE-----------pts~LD 186 (255)
T d2hyda1 118 TATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDE-----------ATSALD 186 (255)
T ss_dssp SCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTTSCHHHHHHHHHHHHHHHCCSEEEEES-----------TTTTCC
T ss_pred CCCHHHHHHHHHHhCCHHHHHhccccccchhcCCCCCcCHHHHHHHHHHHHHhcCCCEEEEeC-----------ccccCC
Confidence 00 0111 1222 23344555567899999999 667789
Q ss_pred HHHHHHHHHHHHHccccccCCCeEEEEEeCCcchhh
Q 014743 280 SEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILD 315 (419)
Q Consensus 280 ~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~~ld 315 (419)
+.....+.+.+..+. .+.+||+.||+++.+.
T Consensus 187 ~~t~~~i~~~l~~l~-----~~~TvI~itH~~~~~~ 217 (255)
T d2hyda1 187 LESESIIQEALDVLS-----KDRTTLIVAHRLSTIT 217 (255)
T ss_dssp HHHHHHHHHHHHHHT-----TTSEEEEECSSGGGTT
T ss_pred HHHHHHHHHHHHHHh-----cCCEEEEEeCCHHHHH
Confidence 999888888887763 2456788899987653
No 50
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=98.80 E-value=1e-08 Score=95.05 Aligned_cols=53 Identities=23% Similarity=0.313 Sum_probs=43.3
Q ss_pred HHHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCeEEEEEeCCcchhh
Q 014743 248 VMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILD 315 (419)
Q Consensus 248 ~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~~ld 315 (419)
..|....|.+|++|| |+.+.|+.....+++++.++. ..++.||++||+.+.+-
T Consensus 162 AraL~~~P~llilDE-----------Pt~gLD~~~~~~i~~~i~~l~----~~g~til~vsHdl~~~~ 214 (254)
T d1g6ha_ 162 GRALMTNPKMIVMDE-----------PIAGVAPGLAHDIFNHVLELK----AKGITFLIIEHRLDIVL 214 (254)
T ss_dssp HHHHHTCCSEEEEES-----------TTTTCCHHHHHHHHHHHHHHH----HTTCEEEEECSCCSTTG
T ss_pred HHHHHhCcCchhhcC-----------CcccCCHHHHHHHHHHHHHHH----HCCCEEEEEeCcHHHHH
Confidence 344557899999999 888899999999999998873 34788999999987653
No 51
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=98.78 E-value=8.9e-09 Score=95.57 Aligned_cols=56 Identities=18% Similarity=0.309 Sum_probs=44.2
Q ss_pred HHHHHHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCeEEEEEeCCcchhh
Q 014743 245 ELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILD 315 (419)
Q Consensus 245 ~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~~ld 315 (419)
-.+..|....|.||++|| |+++.|+.....+.+++.++. ..+..||++||+.+.+-
T Consensus 158 v~iAraL~~~P~llilDE-----------PT~gLD~~~~~~i~~ll~~l~----~~g~til~vtHdl~~~~ 213 (258)
T d1b0ua_ 158 VSIARALAMEPDVLLFDE-----------PTSALDPELVGEVLRIMQQLA----EEGKTMVVVTHEMGFAR 213 (258)
T ss_dssp HHHHHHHHTCCSEEEEES-----------TTTTSCHHHHHHHHHHHHHHH----HTTCCEEEECSCHHHHH
T ss_pred HHHHHHHhcCCCEEEecc-----------ccccCCHHHHHHHHHhhhhhc----ccCCceEEEeCCHHHHH
Confidence 344445567899999999 888899999999999998884 23567888999887653
No 52
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=98.73 E-value=8.4e-09 Score=94.91 Aligned_cols=110 Identities=20% Similarity=0.282 Sum_probs=72.0
Q ss_pred cCCCCCCeEEEEcCCCChHHHHHHHHHhcc--CCceEEEeCcchh-----------------------------------
Q 014743 190 LGIAQPKGVLLYGPPGTGKTLLARAVAHHT--DCTFIRVSGSELV----------------------------------- 232 (419)
Q Consensus 190 ~gi~~p~~iLL~GPpGtGKT~LakalA~~~--~~~~i~v~~s~l~----------------------------------- 232 (419)
+.++++..+.|.||+|+|||||++.|++.. ...-+.+++.++.
T Consensus 23 l~i~~Ge~vaivG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~eNi~~~~~~ 102 (242)
T d1mv5a_ 23 FEAQPNSIIAFAGPSGGGKSTIFSLLERFYQPTAGEITIDGQPIDNISLENWRSQIGFVSQDSAIMAGTIRENLTYGLEG 102 (242)
T ss_dssp EEECTTEEEEEECCTTSSHHHHHHHHTTSSCCSBSCEEETTEESTTTSCSCCTTTCCEECCSSCCCCEEHHHHTTSCTTS
T ss_pred EEEcCCCEEEEECCCCCCHHHHHHHHHHhhCCCCCEEEECCEEeccccHHHHHhheEEEccccccCCcchhhheeccccc
Confidence 456788889999999999999999999754 2223333332110
Q ss_pred ---------------------------hhhhc----hhHHHHHH--HHHHHHhhCCceEEecccccccccccCCCCCCCC
Q 014743 233 ---------------------------QKYIG----EGSRMVRE--LFVMAREHAPSIIFMDEIDSIGSARMESGSGNGD 279 (419)
Q Consensus 233 ---------------------------~~~~g----~~~~~i~~--lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~ 279 (419)
...+| ...+..++ .+.+|.-..|.||++|| ++++.|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~LSGGqkQRv~iARal~~~p~ililDE-----------pts~LD 171 (242)
T d1mv5a_ 103 DYTDEDLWQVLDLAFARSFVENMPDQLNTEVGERGVKISGGQRQRLAIARAFLRNPKILMLDE-----------ATASLD 171 (242)
T ss_dssp CSCHHHHHHHHHHHTCTTTTTSSTTGGGCEESTTSBCCCHHHHHHHHHHHHHHHCCSEEEEEC-----------CSCSSC
T ss_pred ccchhhHHHHHHHHHhhhhhccCcccccccccCCCCCCCHHHHHHHHHHHHHhcCCCEEEecC-----------CccccC
Confidence 00111 12333333 44455567899999999 556677
Q ss_pred HHHHHHHHHHHHHccccccCCCeEEEEEeCCcchhh
Q 014743 280 SEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILD 315 (419)
Q Consensus 280 ~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~~ld 315 (419)
+.....+.+++..+. .+.+||++||+++.+.
T Consensus 172 ~~~~~~i~~~l~~l~-----~~~Tvi~itH~l~~~~ 202 (242)
T d1mv5a_ 172 SESESMVQKALDSLM-----KGRTTLVIAHRLSTIV 202 (242)
T ss_dssp SSSCCHHHHHHHHHH-----TTSEEEEECCSHHHHH
T ss_pred HHHHHHHHHHHHHHc-----CCCEEEEEECCHHHHH
Confidence 766777777777662 2567889999987664
No 53
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=98.72 E-value=9.8e-09 Score=91.77 Aligned_cols=108 Identities=19% Similarity=0.195 Sum_probs=67.3
Q ss_pred hcCCCCCCeEEEEcCCCChHHHHHHHHHhcc--CCceEEEeCcchh----------------------------------
Q 014743 189 SLGIAQPKGVLLYGPPGTGKTLLARAVAHHT--DCTFIRVSGSELV---------------------------------- 232 (419)
Q Consensus 189 ~~gi~~p~~iLL~GPpGtGKT~LakalA~~~--~~~~i~v~~s~l~---------------------------------- 232 (419)
++.++++..+.|.||+|+|||||.++|++.+ ...-+.+++.++.
T Consensus 21 s~~i~~Gei~~l~G~NGsGKSTLl~~i~gl~~p~~G~I~~~g~~i~~~~~~i~~~~~~~~~~~~~t~~~~l~~~~~~~~~ 100 (200)
T d1sgwa_ 21 TMTIEKGNVVNFHGPNGIGKTTLLKTISTYLKPLKGEIIYNGVPITKVKGKIFFLPEEIIVPRKISVEDYLKAVASLYGV 100 (200)
T ss_dssp EEEEETTCCEEEECCTTSSHHHHHHHHTTSSCCSEEEEEETTEEGGGGGGGEEEECSSCCCCTTSBHHHHHHHHHHHTTC
T ss_pred EEEEcCCCEEEEECCCCChHHHHHHHHhcccccCCCEEEECCEehhHhcCcEEEEeecccCCCCcCHHHHHHHHHHhcCC
Confidence 3456788889999999999999999999743 2222333321110
Q ss_pred -------------------hhhhchhHHHHHHHHH--HHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHH
Q 014743 233 -------------------QKYIGEGSRMVRELFV--MAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLN 291 (419)
Q Consensus 233 -------------------~~~~g~~~~~i~~lf~--~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~ 291 (419)
.+.+++..++.++-+. .|....|.|+++|| |+++.|+.....+++.+.
T Consensus 101 ~~~~~~~~~~l~~~~~~~~~~~~~~LSgG~~qrv~ia~al~~~~~llllDE-----------Pt~gLD~~~~~~i~~~l~ 169 (200)
T d1sgwa_ 101 KVNKNEIMDALESVEVLDLKKKLGELSQGTIRRVQLASTLLVNAEIYVLDD-----------PVVAIDEDSKHKVLKSIL 169 (200)
T ss_dssp CCCHHHHHHHHHHTTCCCTTSBGGGSCHHHHHHHHHHHHTTSCCSEEEEES-----------TTTTSCTTTHHHHHHHHH
T ss_pred ccCHHHHHHHHHHcCCcccccccCcCCCcHHHHHHHHHHHhcCCCEEEEcC-----------cccccCHHHHHHHHHHHH
Confidence 0122232333333333 34456799999999 777788877777776666
Q ss_pred HccccccCCCeEEEEEeCC
Q 014743 292 QLDGFEASNKIKVLMATNR 310 (419)
Q Consensus 292 ~l~~~~~~~~v~VI~tTn~ 310 (419)
++. ...+++||.+++.
T Consensus 170 ~~~---~~~~~~ii~~~~~ 185 (200)
T d1sgwa_ 170 EIL---KEKGIVIISSREE 185 (200)
T ss_dssp HHH---HHHSEEEEEESSC
T ss_pred HHH---hCCCEEEEEEech
Confidence 552 2345667766654
No 54
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.66 E-value=3e-08 Score=93.06 Aligned_cols=110 Identities=21% Similarity=0.252 Sum_probs=68.7
Q ss_pred cCCCCCCeEEEEcCCCChHHHHHHHHHhccC--CceEEEeCc-------------ch-----------------------
Q 014743 190 LGIAQPKGVLLYGPPGTGKTLLARAVAHHTD--CTFIRVSGS-------------EL----------------------- 231 (419)
Q Consensus 190 ~gi~~p~~iLL~GPpGtGKT~LakalA~~~~--~~~i~v~~s-------------~l----------------------- 231 (419)
+.+.++..+.|.||+|+|||||+++|++.+. ...+.+++. .+
T Consensus 57 l~i~~Ge~vaivG~nGsGKSTLl~~i~Gl~~p~~G~I~~~g~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~ 136 (281)
T d1r0wa_ 57 LNIEKGEMLAITGSTGSGKTSLLMLILGELEASEGIIKHSGRVSFCSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQ 136 (281)
T ss_dssp EEECTTCEEEEEESTTSSHHHHHHHHHTSSCCSEEEEECCSCEEEECSSCCCCSEEHHHHHTTTSCCCHHHHHHHHHHTT
T ss_pred EEEcCCCEEEEECCCCChHHHHHHHHhCCCcCCCcEEEECCEEEEEeccccccCceeeccccccccccchHHHHHHHHHH
Confidence 4567888899999999999999999998552 222333220 00
Q ss_pred ----hhh-------hhch----hHHH--HHHHHHHHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHcc
Q 014743 232 ----VQK-------YIGE----GSRM--VRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLD 294 (419)
Q Consensus 232 ----~~~-------~~g~----~~~~--i~~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~ 294 (419)
+.. .+++ ..++ .|-.+.+|....|.|+++|| ++++.|+.....+++.+ +.
T Consensus 137 ~~~~i~~l~~~~~~~~~~~~~~LSgGqkQRv~lARaL~~~p~illLDE-----------Pts~LD~~~~~~i~~~~--~~ 203 (281)
T d1r0wa_ 137 LQQDITKFAEQDNTVLGEGGVTLSGGQRARISLARAVYKDADLYLLDS-----------PFGYLDVFTEEQVFESC--VC 203 (281)
T ss_dssp CHHHHTTSTTGGGCEECTTCTTSCHHHHHHHHHHHHHHSCCSEEEEES-----------CCCSSCHHHHHHHHHHC--CC
T ss_pred hHHHHHhchhhhhhhhhhhccCCCHHHHHHHHHHHHHHhCccchhhcC-----------ccccCCHHHHHHHHHHH--HH
Confidence 000 0111 1222 34445556678899999999 67778887766665432 11
Q ss_pred ccccCCCeEEEEEeCCcchh
Q 014743 295 GFEASNKIKVLMATNRIDIL 314 (419)
Q Consensus 295 ~~~~~~~v~VI~tTn~~~~l 314 (419)
. ...+.++|+.||+.+.+
T Consensus 204 ~--~~~~~tvi~itH~~~~l 221 (281)
T d1r0wa_ 204 K--LMANKTRILVTSKMEHL 221 (281)
T ss_dssp C--CTTTSEEEEECSCHHHH
T ss_pred H--hhCCCEEEEEechHHHH
Confidence 1 12355678889987654
No 55
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=98.29 E-value=1.1e-06 Score=74.73 Aligned_cols=37 Identities=30% Similarity=0.483 Sum_probs=32.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcch
Q 014743 195 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL 231 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l 231 (419)
++-++|.|||||||||+|++|++.++.+++.+++..+
T Consensus 4 g~iI~l~G~~GsGKSTia~~La~~lg~~~~~~~~d~~ 40 (176)
T d1zp6a1 4 GNILLLSGHPGSGKSTIAEALANLPGVPKVHFHSDDL 40 (176)
T ss_dssp TEEEEEEECTTSCHHHHHHHHHTCSSSCEEEECTTHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHhCCCEEEecHHHH
Confidence 4568899999999999999999999999999987654
No 56
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=98.24 E-value=7.8e-06 Score=75.86 Aligned_cols=172 Identities=16% Similarity=0.160 Sum_probs=95.0
Q ss_pred ccccCcHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhcc----CCc---eEEEeCcchhh
Q 014743 161 DMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT----DCT---FIRVSGSELVQ 233 (419)
Q Consensus 161 ~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~----~~~---~i~v~~s~l~~ 233 (419)
.++.|.+..++.|.+.+... +-.....+.|||+.|+|||+||+.+++.. ... .+.+..+....
T Consensus 20 ~~~~gR~~~~~~i~~~L~~~----------~~~~~~~v~I~GmgGiGKTtLA~~v~~~~~~~~~~~f~~~~Wv~vs~~~~ 89 (277)
T d2a5yb3 20 MTCYIREYHVDRVIKKLDEM----------CDLDSFFLFLHGRAGSGKSVIASQALSKSDQLIGINYDSIVWLKDSGTAP 89 (277)
T ss_dssp CCSCCCHHHHHHHHHHHHHH----------TTSSSEEEEEECSTTSSHHHHHHHHHHHCSSTBTTTBSEEEEEECCCCST
T ss_pred CceeCcHHHHHHHHHHHHhc----------cCCCceEEEEECCCCCCHHHHHHHHHHhhhhhhhhcCceEEEEEecCCCC
Confidence 35779999999999887531 11234567799999999999999998642 221 22232221110
Q ss_pred ---------hh---------------hchhHHHHH-HHHHHHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHH
Q 014743 234 ---------KY---------------IGEGSRMVR-ELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLE 288 (419)
Q Consensus 234 ---------~~---------------~g~~~~~i~-~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~ 288 (419)
.. ........+ ..........+++|+||+++.. ...+
T Consensus 90 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~kr~LlVLDDv~~~--------------~~~~---- 151 (277)
T d2a5yb3 90 KSTFDLFTDILLMLKSEDDLLNFPSVEHVTSVVLKRMICNALIDRPNTLFVFDDVVQE--------------ETIR---- 151 (277)
T ss_dssp THHHHHHHHHHHHHTTTSCCTTCCCCTTCCHHHHHHHHHHHHTTSTTEEEEEEEECCH--------------HHHH----
T ss_pred HHHHHHHHHHHHHHhcchhhcCCccchhhhhHHHHHHHHHHHhccCCeeEecchhhHH--------------hhhh----
Confidence 00 001111112 2222333456789999998651 1111
Q ss_pred HHHHccccccCCCeEEEEEeCCcchhhHHhcCCCceeEEEEcCCCCHHHHHHHHHHHHhhcccCCC-CC-HHHHHHHcCC
Q 014743 289 LLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRG-ID-LKKIAEKMNG 366 (419)
Q Consensus 289 lL~~l~~~~~~~~v~VI~tTn~~~~ld~allr~gRfd~~I~~~~P~~~~r~~Il~~~~~~~~~~~~-~d-l~~la~~t~G 366 (419)
.+. ..+..||+||...+... .+.. + ...+.+...+.++-.++|..+....+.... .+ ...+++.+.|
T Consensus 152 ~~~-------~~~srilvTTR~~~v~~-~~~~--~-~~~~~l~~L~~~ea~~Lf~~~~~~~~~~~~~~~~~~~iv~~c~G 220 (277)
T d2a5yb3 152 WAQ-------ELRLRCLVTTRDVEISN-AASQ--T-CEFIEVTSLEIDECYDFLEAYGMPMPVGEKEEDVLNKTIELSSG 220 (277)
T ss_dssp HHH-------HTTCEEEEEESBGGGGG-GCCS--C-EEEEECCCCCHHHHHHHHHHTSCCCC--CHHHHHHHHHHHHHTT
T ss_pred hhc-------ccCceEEEEeehHHHHH-hcCC--C-CceEECCCCCHHHHHHHHHHHhCCccCchhhHHHHHHHHHHhCC
Confidence 111 12346788888664433 2221 1 246789999999999998765322221110 11 3567788887
Q ss_pred CCHHHH
Q 014743 367 ASGAEL 372 (419)
Q Consensus 367 ~sgadi 372 (419)
. |--|
T Consensus 221 l-PLAl 225 (277)
T d2a5yb3 221 N-PATL 225 (277)
T ss_dssp C-HHHH
T ss_pred C-HHHH
Confidence 5 4333
No 57
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=98.24 E-value=2e-07 Score=79.63 Aligned_cols=41 Identities=27% Similarity=0.300 Sum_probs=34.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcchhhh
Q 014743 194 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK 234 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~~~ 234 (419)
.++.|+|.|||||||||||++||..++.+++......+...
T Consensus 6 ~~K~I~i~G~~GsGKTTla~~La~~~~~~~i~~~~~~~~~~ 46 (192)
T d1lw7a2 6 FAKTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFE 46 (192)
T ss_dssp TCEEEEEECCTTSHHHHHHHHHHHHTTCEEECCTTHHHHHH
T ss_pred cceEEEEECCCCCCHHHHHHHHHHHhCCCeEeeehHHHhhh
Confidence 35789999999999999999999999998887776655433
No 58
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=98.23 E-value=2.2e-06 Score=77.08 Aligned_cols=108 Identities=17% Similarity=0.236 Sum_probs=66.2
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHHhcc---CCceEEEeCcchh----hh----------------------h--hchh
Q 014743 191 GIAQPKGVLLYGPPGTGKTLLARAVAHHT---DCTFIRVSGSELV----QK----------------------Y--IGEG 239 (419)
Q Consensus 191 gi~~p~~iLL~GPpGtGKT~LakalA~~~---~~~~i~v~~s~l~----~~----------------------~--~g~~ 239 (419)
|++++..++++||||||||+++..+|... +...+.++..+-. .. + ....
T Consensus 22 Gi~~gsl~li~G~pGsGKT~l~~qia~~~~~~~~~~~~is~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (242)
T d1tf7a2 22 GFFKDSIILATGATGTGKTLLVSRFVENACANKERAILFAYEESRAQLLRNAYSWGMDFEEMERQNLLKIVCAYPESAGL 101 (242)
T ss_dssp SEESSCEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEESSSCHHHHHHHHHTTSCCHHHHHHTTSEEECCCCGGGSCH
T ss_pred CCcCCeEEEEEeCCCCCHHHHHHHHHHHHHHhccccceeeccCCHHHHHHHHHHcCCChHHHhhcCceEEEEeecchhhH
Confidence 57888899999999999999999998764 4444555432110 00 0 0112
Q ss_pred HHHHHHHHHHHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCeEEEEEeC
Q 014743 240 SRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATN 309 (419)
Q Consensus 240 ~~~i~~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn 309 (419)
...+..+........|.++++|.++.++... ........+..++... ...++.++++++
T Consensus 102 ~~~~~~i~~~i~~~~~~~vviDs~~~~~~~~-------~~~~~~~~~~~l~~~~----~~~~~~~i~~~~ 160 (242)
T d1tf7a2 102 EDHLQIIKSEINDFKPARIAIDSLSALARGV-------SNNAFRQFVIGVTGYA----KQEEITGLFTNT 160 (242)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEECHHHHTSSS-------CHHHHHHHHHHHHHHH----HHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCceeeeecchhhhcCC-------CHHHHHHHHHHHHHHH----HHcCCeEEEEEe
Confidence 3334556666778899999999999875421 2233444444444433 334555555544
No 59
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=98.21 E-value=5.9e-07 Score=74.91 Aligned_cols=31 Identities=29% Similarity=0.639 Sum_probs=27.7
Q ss_pred CeEEEEcCCCChHHHHHHHHHhccCCceEEE
Q 014743 196 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRV 226 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~LakalA~~~~~~~i~v 226 (419)
+.|+|.|||||||||+++.||..++.+++..
T Consensus 3 k~I~l~G~~GsGKSTvak~La~~L~~~~id~ 33 (169)
T d1kaga_ 3 RNIFLVGPMGAGKSTIGRQLAQQLNMEFYDS 33 (169)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHTTCEEEEH
T ss_pred CeEEEECCCCCCHHHHHHHHHHHhCCCeEee
Confidence 4689999999999999999999999988643
No 60
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=98.01 E-value=1.2e-05 Score=71.17 Aligned_cols=112 Identities=22% Similarity=0.253 Sum_probs=66.6
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHHhc----cCCceEEEeCcchhhh--------------------------------
Q 014743 191 GIAQPKGVLLYGPPGTGKTLLARAVAHH----TDCTFIRVSGSELVQK-------------------------------- 234 (419)
Q Consensus 191 gi~~p~~iLL~GPpGtGKT~LakalA~~----~~~~~i~v~~s~l~~~-------------------------------- 234 (419)
|++++.-++|+||||+|||+++..+|.. -+..++.++..+-...
T Consensus 22 Gi~~G~~~~I~G~~G~GKT~la~~~~~~~~~~~~~~~~~~s~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (242)
T d1tf7a1 22 GLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGKLFILDASPDPEG 101 (242)
T ss_dssp SEETTSEEEEEESTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHHHHHHGGGTCCHHHHHHTTSEEEEECCCCSSC
T ss_pred CCcCCeEEEEEeCCCCCHHHHHHHHHHHHHHhcCCCcccccccCCHHHHHHHHHHcCCChHHHHHhcchhhhhhccchhh
Confidence 6889999999999999999999776532 2344555543211000
Q ss_pred ----hhchhHHHHHHHHHHHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCeEEEEEeCC
Q 014743 235 ----YIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNR 310 (419)
Q Consensus 235 ----~~g~~~~~i~~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~ 310 (419)
........+..+...+..+.|.++++|.+..+.... .......+.+..++... ...++.++.+++.
T Consensus 102 ~~~~~~~~~~~l~~~l~~~i~~~~~~~viiD~~~~l~~~~------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 171 (242)
T d1tf7a1 102 QEVVGGFDLSALIERINYAIQKYRARRVSIDSVTSVFQQY------DASSVVRRELFRLVARL----KQIGATTVMTTER 171 (242)
T ss_dssp CSCCSSHHHHHHHHHHHHHHHHHTCSEEEEECSTTTSTTT------CCHHHHHHHHHHHHHHH----HHHTCEEEEEEEC
T ss_pred hhhhccccHHHHHHHHHHHHHhhccchhhhhHHHHHHHhc------cChhHHHHHHHHHHHHH----HhcCCceEEeecc
Confidence 001122334566666778899999999998876432 12233444444444433 2335556666554
Q ss_pred cc
Q 014743 311 ID 312 (419)
Q Consensus 311 ~~ 312 (419)
..
T Consensus 172 ~~ 173 (242)
T d1tf7a1 172 IE 173 (242)
T ss_dssp SS
T ss_pred cc
Confidence 43
No 61
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=97.99 E-value=2.2e-06 Score=72.50 Aligned_cols=36 Identities=14% Similarity=0.255 Sum_probs=31.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcc
Q 014743 195 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSE 230 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~ 230 (419)
++-|+|+||||+||||+|++|++.++.+++.++...
T Consensus 3 ~kiI~l~G~~GsGKsTva~~L~~~l~~~~~~~~~d~ 38 (178)
T d1qhxa_ 3 TRMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGVDS 38 (178)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHSSSCEEEEEHHH
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHcCCCeEEeecch
Confidence 456889999999999999999999999988877543
No 62
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=97.99 E-value=1.1e-06 Score=74.32 Aligned_cols=29 Identities=38% Similarity=0.723 Sum_probs=26.5
Q ss_pred eEEEEcCCCChHHHHHHHHHhccCCceEE
Q 014743 197 GVLLYGPPGTGKTLLARAVAHHTDCTFIR 225 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~~~~~~~i~ 225 (419)
.++|.|||||||||+|+.||..++.+++.
T Consensus 6 ~I~i~G~pGsGKTTia~~La~~l~~~~i~ 34 (173)
T d1rkba_ 6 NILLTGTPGVGKTTLGKELASKSGLKYIN 34 (173)
T ss_dssp CEEEECSTTSSHHHHHHHHHHHHCCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCcEEe
Confidence 57899999999999999999999988775
No 63
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=97.97 E-value=1.7e-05 Score=72.41 Aligned_cols=62 Identities=16% Similarity=0.267 Sum_probs=44.9
Q ss_pred HHHHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCeEEEEEeCCcchhhHHhcCCCceeE
Q 014743 247 FVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDR 326 (419)
Q Consensus 247 f~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~~ld~allr~gRfd~ 326 (419)
+..+....|.+|+|||++ ++.|+..+..+.++|..+. ..+.-||+|||+++.++ -+|+
T Consensus 218 ~~~~l~~~~~llllDEp~-----------~~Ld~~~~~~l~~~l~~~~----~~~~qviv~TH~~~~~~-------~~D~ 275 (292)
T g1f2t.1 218 MSLYLAGEISLLILDEPT-----------PYLDEERRRKLITIMERYL----KKIPQVILVSHDEELKD-------AADH 275 (292)
T ss_dssp HHHHHHSSCSEEEEESCS-----------CTTCHHHHHHHHHHHHHTG----GGSSEEEEEESCGGGGG-------GCSE
T ss_pred HhhhhcCCCCEEEEeCCc-----------ccCCHHHHHHHHHHHHHHH----hCCCEEEEEeecHHHHH-------hCCE
Confidence 334456778999999954 4689999999999998873 22347899999877543 3466
Q ss_pred EEEc
Q 014743 327 KIEF 330 (419)
Q Consensus 327 ~I~~ 330 (419)
+|.+
T Consensus 276 ii~l 279 (292)
T g1f2t.1 276 VIRI 279 (292)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6665
No 64
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=97.97 E-value=9.9e-06 Score=74.74 Aligned_cols=121 Identities=19% Similarity=0.238 Sum_probs=68.6
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHHhcc---CCceEEEeCcchhhh----------------hhchhHHHHHHHHHHHH
Q 014743 191 GIAQPKGVLLYGPPGTGKTLLARAVAHHT---DCTFIRVSGSELVQK----------------YIGEGSRMVRELFVMAR 251 (419)
Q Consensus 191 gi~~p~~iLL~GPpGtGKT~LakalA~~~---~~~~i~v~~s~l~~~----------------~~g~~~~~i~~lf~~a~ 251 (419)
|++.+.-+.|+||||||||+++-.++... +...++++...-+.. .....+..+..+-...+
T Consensus 50 Gi~~g~itei~G~~gsGKTtl~l~~~~~~q~~g~~~vyidtE~~~~~~~a~~~Gvd~d~v~~~~~~~~E~~~~~i~~l~~ 129 (263)
T d1u94a1 50 GLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALAR 129 (263)
T ss_dssp SEETTSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHTTCCGGGCEEECCSSHHHHHHHHHHHHH
T ss_pred CccCceEEEEecCCCcHHHHHHHHHHHHHHcCCCEEEEEccccccCHHHHHHhCCCHHHEEEecCCCHHHHHHHHHHHHh
Confidence 67788889999999999999999887643 556677765422110 01122333333333445
Q ss_pred hhCCceEEecccccccccc---cCCCCCCCCHHHHHHHHHHHHHccccccCCCeEEEEEeCCcc
Q 014743 252 EHAPSIIFMDEIDSIGSAR---MESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRID 312 (419)
Q Consensus 252 ~~~psVl~iDEiD~l~~~r---~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~ 312 (419)
..++++|++|-+..+.+.. .+... .......+.+..++..+.......++.+|++.+--.
T Consensus 130 ~~~~~liViDSi~al~~~~e~~~~~~~-~~~~~~a~~l~~~~~~l~~~~~~~~~~vi~~NQv~~ 192 (263)
T d1u94a1 130 SGAVDVIVVDSVAALTPKAEIEGEIGD-SHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRM 192 (263)
T ss_dssp HTCCSEEEEECGGGCCCHHHHTTC-------CHHHHHHHHHHHHHHHHHHHHTCEEEEEEC---
T ss_pred cCCCCEEEEECccccccchhccccccc-chHHHHHHHHHHHHHHHHHhhhccCceEEEEEEEEe
Confidence 6788999999998887531 11111 111122344545555444433455777777665433
No 65
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=97.97 E-value=5.5e-05 Score=73.78 Aligned_cols=123 Identities=14% Similarity=0.144 Sum_probs=80.1
Q ss_pred cCCCCCcccccCcHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhccC---CceEEEe-Cc
Q 014743 154 KVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD---CTFIRVS-GS 229 (419)
Q Consensus 154 ~~p~~~~~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~~---~~~i~v~-~s 229 (419)
..+..++++++-...+.+.+++.+.. +..-+||.||+|+||||++.++..+++ .+++.+. ..
T Consensus 131 ~~~~~~l~~LG~~~~~~~~l~~l~~~--------------~~GliLvtGpTGSGKSTTl~~~l~~~~~~~~~i~tiEdPi 196 (401)
T d1p9ra_ 131 NATRLDLHSLGMTAHNHDNFRRLIKR--------------PHGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVEDPI 196 (401)
T ss_dssp TTTCCCGGGSCCCHHHHHHHHHHHTS--------------SSEEEEEECSTTSCHHHHHHHHHHHHCCTTSCEEEEESSC
T ss_pred cccchhhhhhcccHHHHHHHHHHHhh--------------hhceEEEEcCCCCCccHHHHHHhhhhcCCCceEEEeccCc
Confidence 34445678998888888898887754 334578899999999999999988653 3455553 22
Q ss_pred chhhh------hhchhHHHHHHHHHHHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCeE
Q 014743 230 ELVQK------YIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIK 303 (419)
Q Consensus 230 ~l~~~------~~g~~~~~i~~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~ 303 (419)
++.-. ..+.........+..+.+..|+||++.||- +.+......+.-. .+..
T Consensus 197 E~~~~~~~q~~v~~~~~~~~~~~l~~~lR~dPDvi~igEiR--------------d~~ta~~a~~aa~--------tGhl 254 (401)
T d1p9ra_ 197 EFDIDGIGQTQVNPRVDMTFARGLRAILRQDPDVVMVGEIR--------------DLETAQIAVQASL--------TGHL 254 (401)
T ss_dssp CSCCSSSEEEECBGGGTBCHHHHHHHHGGGCCSEEEESCCC--------------SHHHHHHHHHHHH--------TTCE
T ss_pred ccccCCCCeeeecCCcCCCHHHHHHHHHhhcCCEEEecCcC--------------ChHHHHHHHHHHh--------cCCe
Confidence 33211 111222235577778889999999999963 3444444444332 3455
Q ss_pred EEEEeCCcc
Q 014743 304 VLMATNRID 312 (419)
Q Consensus 304 VI~tTn~~~ 312 (419)
|+.|.|-.+
T Consensus 255 V~tTlHa~~ 263 (401)
T d1p9ra_ 255 VMSTLHTNT 263 (401)
T ss_dssp EEEEECCSS
T ss_pred EEEEeccCc
Confidence 777766554
No 66
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=97.96 E-value=4.2e-06 Score=71.16 Aligned_cols=32 Identities=38% Similarity=0.604 Sum_probs=28.5
Q ss_pred CeEEEEcCCCChHHHHHHHHHhccCCceEEEe
Q 014743 196 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVS 227 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~ 227 (419)
++++|.|||||||||+++.||..++.+|+..+
T Consensus 1 k~I~liG~~GsGKsTi~k~La~~l~~~~~d~d 32 (161)
T d1viaa_ 1 KNIVFIGFMGSGKSTLARALAKDLDLVFLDSD 32 (161)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHHTCEEEEHH
T ss_pred CcEEEECCCCCCHHHHHHHHHHHhCCCEEecC
Confidence 35788999999999999999999999988654
No 67
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=97.96 E-value=3.3e-05 Score=63.78 Aligned_cols=36 Identities=28% Similarity=0.445 Sum_probs=26.7
Q ss_pred CeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcchh
Q 014743 196 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV 232 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~ 232 (419)
+-|+|+||||+||||+|+.|+.... ++..++..++.
T Consensus 3 klIii~G~pGsGKTTla~~L~~~~~-~~~~~~~d~~~ 38 (152)
T d1ly1a_ 3 KIILTIGCPGSGKSTWAREFIAKNP-GFYNINRDDYR 38 (152)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHST-TEEEECHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHhCC-CCEEechHHHH
Confidence 3478899999999999999876542 35566655543
No 68
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=97.93 E-value=3.1e-06 Score=73.57 Aligned_cols=41 Identities=22% Similarity=0.428 Sum_probs=32.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcchhhhhh
Q 014743 194 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYI 236 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~~~~~ 236 (419)
.|..|+|.|||||||||+|+.||..++..+ ++..+++....
T Consensus 2 ~Pm~I~i~GppGsGKsT~a~~La~~~~~~~--is~~~~~~~~~ 42 (189)
T d1zaka1 2 DPLKVMISGAPASGKGTQCELIKTKYQLAH--ISAGDLLRAEI 42 (189)
T ss_dssp CSCCEEEEESTTSSHHHHHHHHHHHHCCEE--CCHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHCCcE--EehhHHHHHhh
Confidence 477899999999999999999999986664 55566655443
No 69
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.93 E-value=7.1e-06 Score=69.73 Aligned_cols=30 Identities=27% Similarity=0.544 Sum_probs=26.5
Q ss_pred EEEEcCCCChHHHHHHHHHhccCCceEEEe
Q 014743 198 VLLYGPPGTGKTLLARAVAHHTDCTFIRVS 227 (419)
Q Consensus 198 iLL~GPpGtGKT~LakalA~~~~~~~i~v~ 227 (419)
++|.|+|||||||+++.||..++.+|+..+
T Consensus 4 IvliG~~G~GKSTig~~La~~l~~~fiD~D 33 (165)
T d2iyva1 4 AVLVGLPGSGKSTIGRRLAKALGVGLLDTD 33 (165)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHTCCEEEHH
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCCeEeec
Confidence 566699999999999999999999988643
No 70
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=97.92 E-value=2.2e-05 Score=72.52 Aligned_cols=124 Identities=17% Similarity=0.257 Sum_probs=72.8
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHHhcc---CCceEEEeCcchh-----hhh-----------hchhHHHHHHHHHHHH
Q 014743 191 GIAQPKGVLLYGPPGTGKTLLARAVAHHT---DCTFIRVSGSELV-----QKY-----------IGEGSRMVRELFVMAR 251 (419)
Q Consensus 191 gi~~p~~iLL~GPpGtGKT~LakalA~~~---~~~~i~v~~s~l~-----~~~-----------~g~~~~~i~~lf~~a~ 251 (419)
|++.++-+.++||+|||||+++..++... +...+++|...-+ ..+ +...+..+.-+-...+
T Consensus 53 Gip~g~itei~G~~~sGKT~l~l~~~~~aqk~g~~v~yiDtE~~~~~~~a~~~Gvd~d~i~~~~~~~~E~~~~~~~~l~~ 132 (268)
T d1xp8a1 53 GIPRGRITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALDPVYARALGVNTDELLVSQPDNGEQALEIMELLVR 132 (268)
T ss_dssp SEETTSEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHHHHTTCCGGGCEEECCSSHHHHHHHHHHHHT
T ss_pred CccCceEEEEecCCccchHHHHHHHHHHHHhCCCEEEEEECCccCCHHHHHHhCCCchhEEEEcCCCHHHHHHHHHHHHh
Confidence 56778889999999999999999887643 5667777764221 111 1112323322222334
Q ss_pred hhCCceEEeccccccccccc-CCCC-CCCCHHHHHHHHHHHHHccccccCCCeEEEEEeCCcchh
Q 014743 252 EHAPSIIFMDEIDSIGSARM-ESGS-GNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDIL 314 (419)
Q Consensus 252 ~~~psVl~iDEiD~l~~~r~-~~~~-~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~~l 314 (419)
...+.+|++|=+.++.++.. +... ........+.+..++..+...-...++.+|++.+..+.+
T Consensus 133 ~~~~~liIiDSi~al~~r~e~~~~~~~~~~~~~a~~l~~~lr~l~~~~~~~~~~vi~tNQv~~~~ 197 (268)
T d1xp8a1 133 SGAIDVVVVDSVAALTPRAEIEGDMGDSLPGLQARLMSQALRKLTAILSKTGTAAIFINQVREKI 197 (268)
T ss_dssp TTCCSEEEEECTTTCCCSTTC--------CCHHHHHHHHHHHHHHHHHTTTCCEEEEEEEC----
T ss_pred cCCCcEEEEecccccccHHHHcccccchhHHHHHHHHHHHHHHHHhhhhhcCCeEEEEeEEeecc
Confidence 56789999999999885432 1110 011123455566666666555566788888886654433
No 71
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=97.90 E-value=3.5e-06 Score=71.39 Aligned_cols=29 Identities=38% Similarity=0.592 Sum_probs=25.7
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhccCC
Q 014743 193 AQPKGVLLYGPPGTGKTLLARAVAHHTDC 221 (419)
Q Consensus 193 ~~p~~iLL~GPpGtGKT~LakalA~~~~~ 221 (419)
+.+..|+|.|||||||||+++.||..++.
T Consensus 3 pk~~~I~i~G~~GsGKTT~~~~La~~l~~ 31 (174)
T d1y63a_ 3 PKGINILITGTPGTGKTSMAEMIAAELDG 31 (174)
T ss_dssp CSSCEEEEECSTTSSHHHHHHHHHHHSTT
T ss_pred CCCCEEEEEeCCCCCHHHHHHHHHHHhCC
Confidence 45667999999999999999999998864
No 72
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.90 E-value=3.4e-05 Score=66.25 Aligned_cols=37 Identities=24% Similarity=0.415 Sum_probs=29.4
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcch
Q 014743 193 AQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL 231 (419)
Q Consensus 193 ~~p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l 231 (419)
+.|.-+++.|+|||||||+|+.++...+. ..++..++
T Consensus 12 ~~p~liil~G~pGsGKST~a~~l~~~~~~--~~i~~D~~ 48 (172)
T d1yj5a2 12 PNPEVVVAVGFPGAGKSTFIQEHLVSAGY--VHVNRDTL 48 (172)
T ss_dssp SSCCEEEEECCTTSSHHHHHHHHTGGGTC--EEEEHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHhcCC--EEEchHHH
Confidence 56778999999999999999999987764 44555444
No 73
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=97.90 E-value=2.5e-06 Score=72.17 Aligned_cols=34 Identities=29% Similarity=0.469 Sum_probs=28.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhccCCceEEEe
Q 014743 194 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVS 227 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~ 227 (419)
.++-++|.|||||||||+++.||..++..++..+
T Consensus 5 ~~~iivl~G~~GsGKsT~a~~La~~l~~~~~~~d 38 (171)
T d1knqa_ 5 DHHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGD 38 (171)
T ss_dssp TSEEEEEECSTTSCHHHHHHHHHHHHTCEEEEGG
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHhCCCeechh
Confidence 4566888999999999999999999987766543
No 74
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=97.84 E-value=3e-06 Score=72.51 Aligned_cols=31 Identities=23% Similarity=0.473 Sum_probs=27.7
Q ss_pred CeEEEEcCCCChHHHHHHHHHhccCCceEEE
Q 014743 196 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRV 226 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~LakalA~~~~~~~i~v 226 (419)
+.++|.|||||||||+++.||..++.+|+..
T Consensus 3 ~~Iil~G~~GsGKSTia~~LA~~Lg~~~id~ 33 (170)
T d1e6ca_ 3 EPIFMVGARGCGMTTVGRELARALGYEFVDT 33 (170)
T ss_dssp CCEEEESCTTSSHHHHHHHHHHHHTCEEEEH
T ss_pred CCEEEECCCCCCHHHHHHHHHHHhCCCEEeh
Confidence 4578899999999999999999999998754
No 75
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=97.83 E-value=2.2e-05 Score=71.97 Aligned_cols=39 Identities=18% Similarity=0.146 Sum_probs=30.3
Q ss_pred cCCCCCCeEEEEcCCCChHHHHHHHHHhc----cCCceEEEeC
Q 014743 190 LGIAQPKGVLLYGPPGTGKTLLARAVAHH----TDCTFIRVSG 228 (419)
Q Consensus 190 ~gi~~p~~iLL~GPpGtGKT~LakalA~~----~~~~~i~v~~ 228 (419)
.|+.++.-++|.|+||+|||+++..+|.. .+.++..++.
T Consensus 30 ~G~~~G~l~vi~G~~G~GKT~~~~~la~~~a~~~g~~v~~~s~ 72 (277)
T d1cr2a_ 30 LGARGGEVIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAML 72 (277)
T ss_dssp CSBCTTCEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEES
T ss_pred cCCCCCeEEEEEeCCCCCHHHHHHHHHHhhhhhcccceeEeee
Confidence 36888888999999999999999888753 2556555543
No 76
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.79 E-value=5.4e-05 Score=65.42 Aligned_cols=37 Identities=27% Similarity=0.469 Sum_probs=29.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcchhh
Q 014743 195 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ 233 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~~ 233 (419)
|.-|+|.||||+||||.|+.||..++. .+++..+++.
T Consensus 1 p~iI~i~GppGSGKsT~a~~La~~~g~--~~i~~g~llR 37 (194)
T d1teva_ 1 PLVVFVLGGPGAGKGTQCARIVEKYGY--THLSAGELLR 37 (194)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHCC--EEEEHHHHHH
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHhCC--ceEcHHHHHH
Confidence 567899999999999999999998864 5566555554
No 77
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=97.79 E-value=5.1e-06 Score=69.80 Aligned_cols=29 Identities=28% Similarity=0.444 Sum_probs=25.0
Q ss_pred CeEEEEcCCCChHHHHHHHHHhccCCceE
Q 014743 196 KGVLLYGPPGTGKTLLARAVAHHTDCTFI 224 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~LakalA~~~~~~~i 224 (419)
+-|+|.|||||||||+|+.||..++..++
T Consensus 3 klI~i~G~~GsGKTTva~~L~~~~~~~~~ 31 (176)
T d2bdta1 3 KLYIITGPAGVGKSTTCKRLAAQLDNSAY 31 (176)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHSSSEEE
T ss_pred eEEEEECCCCCCHHHHHHHHHHHcCCCEE
Confidence 35889999999999999999999876543
No 78
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=97.79 E-value=0.00013 Score=65.69 Aligned_cols=107 Identities=21% Similarity=0.274 Sum_probs=59.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHHh-----ccCC--------------ceEEEeCcchhh----hhhchhHHHHHHHHHHHH
Q 014743 195 PKGVLLYGPPGTGKTLLARAVAH-----HTDC--------------TFIRVSGSELVQ----KYIGEGSRMVRELFVMAR 251 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~LakalA~-----~~~~--------------~~i~v~~s~l~~----~~~g~~~~~i~~lf~~a~ 251 (419)
.+.++++||+.+|||+++|++|- +.++ =+.++...+-+. .|..+ -..+..++..+.
T Consensus 41 ~~~~iiTGpN~~GKSt~lk~i~l~~~laq~G~~VpA~~a~~~~~d~I~~~~~~~d~~~~~~S~F~~E-~~~~~~il~~~~ 119 (234)
T d1wb9a2 41 RRMLIITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVE-MTETANILHNAT 119 (234)
T ss_dssp SCEEEEECCTTSSHHHHHHHHHHHHHHHTTTCCBSSSEEEECCCCEEEEEEC-----------CHHH-HHHHHHHHHHCC
T ss_pred ceEEEEeccCchhhHHHHHHHHHHHHHHHcCCeEecCceecccchhheeEEccCcccccchhHHHHH-HHHHHHHHHhcc
Confidence 35688999999999999999984 1221 122333333221 12222 223445554443
Q ss_pred hhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCeEEEEEeCCcchhhHH
Q 014743 252 EHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQA 317 (419)
Q Consensus 252 ~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~~ld~a 317 (419)
..++|++||+-+ ++ ...+...+...++..+. ...+..+|+||+..+.....
T Consensus 120 --~~sLvliDE~~~--------gT--~~~eg~~l~~a~l~~l~---~~~~~~~i~tTH~~~l~~~~ 170 (234)
T d1wb9a2 120 --EYSLVLMDEIGR--------GT--STYDGLSLAWACAENLA---NKIKALTLFATHYFELTQLP 170 (234)
T ss_dssp --TTEEEEEESCCC--------CS--SSSHHHHHHHHHHHHHH---HTTCCEEEEECSCGGGGGHH
T ss_pred --cccEEeeccccc--------CC--ChhhhhHHHHHhhhhhh---ccccceEEEecchHHHhhhh
Confidence 357999999766 22 22334444445554442 23567889999987655433
No 79
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=97.76 E-value=1.5e-05 Score=69.12 Aligned_cols=39 Identities=23% Similarity=0.431 Sum_probs=30.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcchhhh
Q 014743 194 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK 234 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~~~ 234 (419)
++..++|.|||||||||+|+.||..++.. .++..+++..
T Consensus 2 ~~~riil~G~pGSGKsT~a~~La~~~g~~--~i~~gdllr~ 40 (190)
T d1ak2a1 2 KGVRAVLLGPPGAGKGTQAPKLAKNFCVC--HLATGDMLRA 40 (190)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHHHHTCE--EEEHHHHHHH
T ss_pred CccEEEEECCCCCCHHHHHHHHHHHhCCe--EEeHHHHHHH
Confidence 45568889999999999999999998654 5555565543
No 80
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=97.76 E-value=8.7e-05 Score=65.90 Aligned_cols=116 Identities=14% Similarity=0.212 Sum_probs=67.0
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhcc---CCceEEEeCcchh-------hh-------------hhchhHHHHHHHHHH
Q 014743 193 AQPKGVLLYGPPGTGKTLLARAVAHHT---DCTFIRVSGSELV-------QK-------------YIGEGSRMVRELFVM 249 (419)
Q Consensus 193 ~~p~~iLL~GPpGtGKT~LakalA~~~---~~~~i~v~~s~l~-------~~-------------~~g~~~~~i~~lf~~ 249 (419)
..|.-++|.||+|+||||.+-.||..+ +..+.-+.+..+. .. ...+....+++..+.
T Consensus 7 ~~p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~~~~~~~~d~~~~l~~~~~~ 86 (211)
T d2qy9a2 7 KAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQA 86 (211)
T ss_dssp CTTEEEEEECCTTSCHHHHHHHHHHHHHTTTCCEEEECCCTTCHHHHHHHHHHHHHTTCCEECCSTTCCHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEecccccccchhhhhhhhhhcCCcccccccCCCHHHHHHHHHHH
Confidence 457788999999999999888888644 4444444443321 01 112234455666667
Q ss_pred HHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHcccccc---CCCeEEEEEeCCcchhhHHh
Q 014743 250 AREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEA---SNKIKVLMATNRIDILDQAL 318 (419)
Q Consensus 250 a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~---~~~v~VI~tTn~~~~ld~al 318 (419)
++.....+||||=.-. ...+....+.+..+.+.+...+. ...++|+-++...+.+..+.
T Consensus 87 a~~~~~d~ilIDTaGr----------~~~d~~~~~el~~l~~~~~~~~~~~p~~~~LVl~a~~~~~~~~~~~ 148 (211)
T d2qy9a2 87 AKARNIDVLIADTAGR----------LQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAK 148 (211)
T ss_dssp HHHTTCSEEEECCCCC----------GGGHHHHHHHHHHHHHHHTTTCTTCCSEEEEEEEGGGTHHHHHHHH
T ss_pred HHHcCCCEEEeccCCC----------ccccHHHHHHHHHHHHHHhhhcccCcceeeeehhcccCcchHHHHh
Confidence 7777889999986322 11233444455555554433222 22345555566666665543
No 81
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=97.76 E-value=8.6e-06 Score=71.01 Aligned_cols=42 Identities=19% Similarity=0.390 Sum_probs=33.5
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcchhhhhh
Q 014743 193 AQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYI 236 (419)
Q Consensus 193 ~~p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~~~~~ 236 (419)
..++-|+|.|||||||||+|+.||..++. ..++..+++....
T Consensus 6 ~~~~iI~l~G~pGSGKsT~a~~La~~~g~--~~is~g~llr~~~ 47 (194)
T d3adka_ 6 KKSKIIFVVGGPGSGKGTQCEKIVQKYGY--THLSTGDLLRAEV 47 (194)
T ss_dssp HTSCEEEEEECTTSSHHHHHHHHHHHTCC--EEEEHHHHHHHHH
T ss_pred cCCcEEEEECCCCCCHHHHHHHHHHHhCC--eeEeccHHHHHHH
Confidence 35678999999999999999999998854 5567677665544
No 82
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=97.75 E-value=0.00012 Score=64.82 Aligned_cols=115 Identities=15% Similarity=0.169 Sum_probs=62.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhcc---CCceEEEeCcchh-------hh---------hh----chhHHHHHHHHHHH
Q 014743 194 QPKGVLLYGPPGTGKTLLARAVAHHT---DCTFIRVSGSELV-------QK---------YI----GEGSRMVRELFVMA 250 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~LakalA~~~---~~~~i~v~~s~l~-------~~---------~~----g~~~~~i~~lf~~a 250 (419)
.|+.++|.||+|+||||.+-.||..+ +..+.-+.+..+. .. +. .+....+.+....+
T Consensus 5 ~~~vi~lvGptGvGKTTTiaKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~i~~~~~~~~~d~~~~~~~~~~~~ 84 (207)
T d1okkd2 5 KGRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRLSIPVIQGPEGTDPAALAYDAVQAM 84 (207)
T ss_dssp SSSEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEECCCCSSTTHHHHHHHHHHHHTCCEECCCTTCCHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEeccccccchhhHhhcccccCceEEeccCCccHHHHHHHHHHHH
Confidence 46778999999999999888888654 3344333332221 11 11 11223334444455
Q ss_pred HhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHcccc---ccCCCeEEEEEeCCcchhhHHh
Q 014743 251 REHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGF---EASNKIKVLMATNRIDILDQAL 318 (419)
Q Consensus 251 ~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~---~~~~~v~VI~tTn~~~~ld~al 318 (419)
+.....+||||=.-. +..+.+....+..+.+..... .....++|+-++...+.+....
T Consensus 85 ~~~~~d~ilIDTaGr----------~~~d~~l~~el~~~~~~~~~~~~~~p~~~~LVl~a~~~~~~~~~~~ 145 (207)
T d1okkd2 85 KARGYDLLFVDTAGR----------LHTKHNLMEELKKVKRAIAKADPEEPKEVWLVLDAVTGQNGLEQAK 145 (207)
T ss_dssp HHHTCSEEEECCCCC----------CTTCHHHHHHHHHHHHHHHHHCTTCCSEEEEEEETTBCTHHHHHHH
T ss_pred HHCCCCEEEcCcccc----------chhhHHHHHHHHHHHHHhhhcccCCCceEEEEeecccCchHHHHHH
Confidence 666778999986332 234455445454444433221 1222355555666666665543
No 83
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.73 E-value=3.8e-05 Score=70.92 Aligned_cols=122 Identities=17% Similarity=0.266 Sum_probs=70.3
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHHhc---cCCceEEEeCcchhh-----h-----------hhchhHHHHHHHHHHHH
Q 014743 191 GIAQPKGVLLYGPPGTGKTLLARAVAHH---TDCTFIRVSGSELVQ-----K-----------YIGEGSRMVRELFVMAR 251 (419)
Q Consensus 191 gi~~p~~iLL~GPpGtGKT~LakalA~~---~~~~~i~v~~s~l~~-----~-----------~~g~~~~~i~~lf~~a~ 251 (419)
|++.++-+.|+||||||||+++-.++.. .+...++|+...-++ . .....+..+..+-...+
T Consensus 56 G~~~g~i~e~~G~~~~GKT~l~l~~~~~~q~~g~~~vyIDtE~~~~~e~a~~~GvD~d~il~~~~~~~E~~~~~~~~l~~ 135 (269)
T d1mo6a1 56 GLPRGRVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGEQALEIADMLIR 135 (269)
T ss_dssp SBCSSSEEEEECSSSSSHHHHHHHHHHHHHHTTCEEEEEESSCCCCHHHHHHHTCCGGGCEEECCSSHHHHHHHHHHHHH
T ss_pred CcccceeEEEecCCCcHHHHHHHHHHHHHhcCCCEEEEEECCccCCHHHHHHhCCCHHHeEEecCCCHHHHHHHHHHHHh
Confidence 6788888999999999999999777653 356677777643211 1 01112222222222234
Q ss_pred hhCCceEEecccccccccc-cCCCCC-CCCHHHHHHHHHHHHHccccccCCCeEEEEEeCCcc
Q 014743 252 EHAPSIIFMDEIDSIGSAR-MESGSG-NGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRID 312 (419)
Q Consensus 252 ~~~psVl~iDEiD~l~~~r-~~~~~~-~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~ 312 (419)
...+.+|++|-+-++.++. .+...+ .......+.+..++..+.......++.+|++.+-.+
T Consensus 136 ~~~~~liIiDSi~al~~~~E~e~~~~~~~~~~~a~~l~~~l~~l~~~~~~~~~~vi~~NQv~~ 198 (269)
T d1mo6a1 136 SGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQLRD 198 (269)
T ss_dssp TTCEEEEEEECSTTCCCHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--
T ss_pred cCCCCEEEEecccccccHHHhccccccchHHHHHHHHHHHHHHHHHHHhhcCchhhhhheeec
Confidence 5678899999999988632 111111 111123455666666655444556788888865433
No 84
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=97.73 E-value=0.00012 Score=63.56 Aligned_cols=36 Identities=17% Similarity=0.353 Sum_probs=27.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhccC---CceEEEeCcc
Q 014743 195 PKGVLLYGPPGTGKTLLARAVAHHTD---CTFIRVSGSE 230 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~LakalA~~~~---~~~i~v~~s~ 230 (419)
|.-|+++|+|||||||+|++||+.++ .....++...
T Consensus 2 p~li~l~GlpgsGKSTla~~L~~~l~~~~~~~~~~~~D~ 40 (213)
T d1bifa1 2 PTLIVMVGLPARGKTYISKKLTRYLNFIGVPTREFNVGQ 40 (213)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHhcCCCCeEEcccc
Confidence 45688999999999999999998763 3444455443
No 85
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=97.71 E-value=0.00011 Score=64.95 Aligned_cols=110 Identities=19% Similarity=0.164 Sum_probs=58.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhcc---CCceEEEeCcchh-------hh---------hh----chhHHHHHHHHHHH
Q 014743 194 QPKGVLLYGPPGTGKTLLARAVAHHT---DCTFIRVSGSELV-------QK---------YI----GEGSRMVRELFVMA 250 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~LakalA~~~---~~~~i~v~~s~l~-------~~---------~~----g~~~~~i~~lf~~a 250 (419)
.++-++|.||+|+||||.+-.||..+ +..+.-+.+..+. .. +. .+...........+
T Consensus 9 ~~~vi~lvGp~GvGKTTTiaKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~~~~~~~~~~~~~~~~~~~~~ 88 (207)
T d1ls1a2 9 DRNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQLRLLGEKVGVPVLEVMDGESPESIRRRVEEKA 88 (207)
T ss_dssp SSEEEEEECCTTTTHHHHHHHHHHHHHHTTCCEEEEECCSSCHHHHHHHHHHHHHHTCCEEECCTTCCHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEecccccchHHHHHHHHHHhcCCccccccccchhhHHHHHHHHHH
Confidence 34557889999999999888888654 3444444443221 00 11 11222333444455
Q ss_pred HhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCeEEEE-EeCCcchhhHH
Q 014743 251 REHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLM-ATNRIDILDQA 317 (419)
Q Consensus 251 ~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~-tTn~~~~ld~a 317 (419)
+.....+||+|=.-. +..+......+..+.+.. ....+++++ ++...+.++.+
T Consensus 89 ~~~~~d~vlIDTaGr----------~~~d~~~~~el~~~~~~~----~~~~~llv~~a~~~~~~~~~~ 142 (207)
T d1ls1a2 89 RLEARDLILVDTAGR----------LQIDEPLMGELARLKEVL----GPDEVLLVLDAMTGQEALSVA 142 (207)
T ss_dssp HHHTCCEEEEECCCC----------SSCCHHHHHHHHHHHHHH----CCSEEEEEEEGGGTHHHHHHH
T ss_pred hhccCcceeeccccc----------chhhhhhHHHHHHHHhhc----CCceEEEEeccccchhHHHHH
Confidence 667778999886433 224444445555555443 223444444 44444555443
No 86
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=97.71 E-value=9e-06 Score=70.67 Aligned_cols=39 Identities=23% Similarity=0.520 Sum_probs=31.3
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcchhh
Q 014743 193 AQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ 233 (419)
Q Consensus 193 ~~p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~~ 233 (419)
+.|.-|+|.|||||||||+|+.||..++. ..++..+++.
T Consensus 4 ~kp~iI~i~G~pGSGKsT~a~~La~~~g~--~~i~~g~~~r 42 (194)
T d1qf9a_ 4 SKPNVVFVLGGPGSGKGTQCANIVRDFGW--VHLSAGDLLR 42 (194)
T ss_dssp CCCEEEEEEESTTSSHHHHHHHHHHHHCC--EEEEHHHHHH
T ss_pred CCCcEEEEECCCCCCHHHHHHHHHHHHCC--ceEchhhHHH
Confidence 46778999999999999999999999865 4555555543
No 87
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.70 E-value=6.6e-06 Score=69.69 Aligned_cols=24 Identities=42% Similarity=0.693 Sum_probs=22.1
Q ss_pred CeEEEEcCCCChHHHHHHHHHhcc
Q 014743 196 KGVLLYGPPGTGKTLLARAVAHHT 219 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~LakalA~~~ 219 (419)
++|+|+||||||||+|+++++..+
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~l 25 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEVL 25 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHH
T ss_pred cEEEEECCCCCcHHHHHHHHHHHH
Confidence 679999999999999999999865
No 88
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=97.70 E-value=7e-05 Score=66.57 Aligned_cols=70 Identities=19% Similarity=0.167 Sum_probs=38.7
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhcc---CCc--eEEEeCcch-----hhhh-------------hchhHHHHHHHHHH
Q 014743 193 AQPKGVLLYGPPGTGKTLLARAVAHHT---DCT--FIRVSGSEL-----VQKY-------------IGEGSRMVRELFVM 249 (419)
Q Consensus 193 ~~p~~iLL~GPpGtGKT~LakalA~~~---~~~--~i~v~~s~l-----~~~~-------------~g~~~~~i~~lf~~ 249 (419)
+.|.-++|.||+|+||||.+-.||..+ +.. ++..|.... +..| ..+....+.+....
T Consensus 10 k~p~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~R~ga~eQL~~~a~~l~v~~~~~~~~~~~~~~~~~a~~~ 89 (211)
T d1j8yf2 10 KIPYVIMLVGVQGTGKATTAGKLAYFYKKKGFKVGLVGADVYRPAALEQLQQLGQQIGVPVYGEPGEKDVVGIAKRGVEK 89 (211)
T ss_dssp SSSEEEEEECSCCC----HHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHHHTCCEECCTTCCCHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEeeccccchhHHHHHhccccCcceeecccchhhhHHHHHHHHH
Confidence 467789999999999999888887644 233 343333211 1111 11223334445555
Q ss_pred HHhhCCceEEecc
Q 014743 250 AREHAPSIIFMDE 262 (419)
Q Consensus 250 a~~~~psVl~iDE 262 (419)
++.....+||||=
T Consensus 90 ~~~~~~d~IlIDT 102 (211)
T d1j8yf2 90 FLSEKMEIIIVDT 102 (211)
T ss_dssp HHHTTCSEEEEEC
T ss_pred hhccCCceEEEec
Confidence 6667788999985
No 89
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=97.69 E-value=4.1e-06 Score=70.87 Aligned_cols=27 Identities=30% Similarity=0.347 Sum_probs=23.6
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhccC
Q 014743 194 QPKGVLLYGPPGTGKTLLARAVAHHTD 220 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~LakalA~~~~ 220 (419)
.|..|+|.|+|||||||+|++||..++
T Consensus 5 ~g~~I~l~G~~GsGKTTia~~La~~L~ 31 (183)
T d1m8pa3 5 QGFTIFLTGYMNSGKDAIARALQVTLN 31 (183)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHh
Confidence 455688999999999999999999874
No 90
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.68 E-value=4.8e-05 Score=67.39 Aligned_cols=79 Identities=18% Similarity=0.214 Sum_probs=50.2
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHHhcc---------CCceEEEeCcchhhh--------h------------------
Q 014743 191 GIAQPKGVLLYGPPGTGKTLLARAVAHHT---------DCTFIRVSGSELVQK--------Y------------------ 235 (419)
Q Consensus 191 gi~~p~~iLL~GPpGtGKT~LakalA~~~---------~~~~i~v~~s~l~~~--------~------------------ 235 (419)
|++++.-++|+||||||||+++-.+|... +...+.++...-... .
T Consensus 30 Gi~~G~~~li~G~pGsGKT~l~lq~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (251)
T d1szpa2 30 GVETGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGTFRPVRLVSIAQRFGLDPDDALNNVAYARAY 109 (251)
T ss_dssp SEESSSEEEEEESTTSSHHHHHHHHTTTTTSCTTTTCCSCEEEEEESSSCCCGGGGHHHHHHTCCCHHHHGGGEEEEECC
T ss_pred CCcCCeEEEEEcCCCCCHHHHHHHHHHHhhhhhhhccCCceEEEEeecchHHHHHHHHHHHhcCCchhhhhcceEEEecc
Confidence 68888999999999999999999887532 334555544321100 0
Q ss_pred -hchhHHHHHHHHHHHHhhCCceEEeccccccccc
Q 014743 236 -IGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSA 269 (419)
Q Consensus 236 -~g~~~~~i~~lf~~a~~~~psVl~iDEiD~l~~~ 269 (419)
...................+.++++|.+..+...
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~ds~~~~~~~ 144 (251)
T d1szpa2 110 NADHQLRLLDAAAQMMSESRFSLIVVDSVMALYRT 144 (251)
T ss_dssp STTTHHHHHHHTHHHHHHSCEEEEEEETGGGGGSC
T ss_pred chhHHHHHHHHHHHHhhccccceeeehhhhhhhhh
Confidence 0011222334445556677888999998877543
No 91
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.66 E-value=2e-05 Score=67.72 Aligned_cols=38 Identities=42% Similarity=0.576 Sum_probs=29.8
Q ss_pred eEEEEcCCCChHHHHHHHHHhccCCceEEEeCcchhhhhh
Q 014743 197 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYI 236 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~~~~~ 236 (419)
.++|.|||||||||+|+.||..++...+ +..+++...+
T Consensus 2 ~I~i~G~pGsGKsT~a~~La~~~g~~~i--~~~~l~~~~~ 39 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVKLAEKLGIPQI--STGELFRRNI 39 (181)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCCEE--EHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceE--chHHHHHHHH
Confidence 5789999999999999999999976654 4455554433
No 92
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.64 E-value=1.6e-05 Score=69.28 Aligned_cols=37 Identities=19% Similarity=0.399 Sum_probs=28.8
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcchhh
Q 014743 195 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ 233 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~~ 233 (419)
...++|.|||||||||+|+.||..++.. .++..+++.
T Consensus 8 ~~iI~i~GppGSGKsT~a~~La~~~g~~--~is~gdl~R 44 (196)
T d1ukza_ 8 VSVIFVLGGPGAGKGTQCEKLVKDYSFV--HLSAGDLLR 44 (196)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHSSCE--EEEHHHHHH
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHhCCe--EEehhHHHH
Confidence 3457888999999999999999999665 455555543
No 93
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=97.64 E-value=0.0002 Score=58.18 Aligned_cols=34 Identities=21% Similarity=0.239 Sum_probs=25.8
Q ss_pred CeEEEEcCCCChHHHHHHHHHhccCCceEEEeCc
Q 014743 196 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGS 229 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s 229 (419)
...+|.+|+|+|||+++-.++...+..++.+...
T Consensus 9 ~~~ll~apTGsGKT~~~~~~~~~~~~~vli~~P~ 42 (136)
T d1a1va1 9 QVAHLHAPTGSGKSTKVPAAYAAQGYKVLVLNPS 42 (136)
T ss_dssp EEEEEECCTTSCTTTHHHHHHHTTTCCEEEEESC
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHcCCcEEEEcCh
Confidence 4579999999999998876666666666655554
No 94
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=97.63 E-value=1.5e-05 Score=68.17 Aligned_cols=36 Identities=25% Similarity=0.427 Sum_probs=29.3
Q ss_pred eEEEEcCCCChHHHHHHHHHhccCCceEEEeCcchhhh
Q 014743 197 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK 234 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~~~ 234 (419)
.|+|.|||||||||+|+.||..++..++ +..+++..
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~~~~~i--~~~~ll~~ 37 (182)
T d1zina1 2 NLVLMGLPGAGKGTQAEKIVAAYGIPHI--STGDMFRA 37 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCCEE--EHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCcee--chhHHHHH
Confidence 4889999999999999999999976654 45566554
No 95
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=97.61 E-value=7.7e-05 Score=66.90 Aligned_cols=101 Identities=21% Similarity=0.341 Sum_probs=56.8
Q ss_pred CeEEEEcCCCChHHHHHHHHHh-----ccCC----c----------eEEEeCcchhh----hhhchhHHHHHHHHHHHHh
Q 014743 196 KGVLLYGPPGTGKTLLARAVAH-----HTDC----T----------FIRVSGSELVQ----KYIGEGSRMVRELFVMARE 252 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~LakalA~-----~~~~----~----------~i~v~~s~l~~----~~~g~~~~~i~~lf~~a~~ 252 (419)
+.++|+||+.+|||++.|+++- +.++ . +.++...+-.. .|..+ -..++.++..+
T Consensus 36 ~~~iiTGpN~~GKSt~lk~i~l~~ilAq~G~~vpA~~~~i~~~d~I~~~~~~~d~~~~~~StF~~e-l~~~~~il~~~-- 112 (224)
T d1ewqa2 36 ELVLITGPNMAGKSTFLRQTALIALLAQVGSFVPAEEAHLPLFDGIYTRIGASDDLAGGKSTFMVE-MEEVALILKEA-- 112 (224)
T ss_dssp CEEEEESCSSSSHHHHHHHHHHHHHHHTTTCCBSSSEEEECCCSEEEEECCC------CCSHHHHH-HHHHHHHHHHC--
T ss_pred cEEEEECCCccccchhhhhhHHHHHHHhccceeecCceEEeecceEEEEECCCccccCCccHHHHh-HHHHHHHhccC--
Confidence 3589999999999999999974 2221 1 22232222221 12111 22344444433
Q ss_pred hCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCeEEEEEeCCcch
Q 014743 253 HAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDI 313 (419)
Q Consensus 253 ~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~~ 313 (419)
...++|++||+-+ +....+.......++..+. ..+..+++|||..+.
T Consensus 113 ~~~sLvliDE~~~----------gT~~~eg~ala~aile~L~----~~~~~~i~tTH~~eL 159 (224)
T d1ewqa2 113 TENSLVLLDEVGR----------GTSSLDGVAIATAVAEALH----ERRAYTLFATHYFEL 159 (224)
T ss_dssp CTTEEEEEESTTT----------TSCHHHHHHHHHHHHHHHH----HHTCEEEEECCCHHH
T ss_pred CCCcEEeeccccc----------CcchhhhcchHHHHHHHHh----hcCcceEEeeechhh
Confidence 3468999999765 2233444555556666653 224568889998654
No 96
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.57 E-value=5.6e-06 Score=71.43 Aligned_cols=28 Identities=32% Similarity=0.413 Sum_probs=23.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhccCC
Q 014743 194 QPKGVLLYGPPGTGKTLLARAVAHHTDC 221 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~LakalA~~~~~ 221 (419)
.|..|+|+|+|||||||+|+.||..++.
T Consensus 18 ~g~vI~L~G~pGSGKTTiAk~La~~l~~ 45 (195)
T d1x6va3 18 RGCTVWLTGLSGAGKTTVSMALEEYLVC 45 (195)
T ss_dssp CCEEEEEESSCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 3556789999999999999999997743
No 97
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=97.56 E-value=0.00017 Score=64.00 Aligned_cols=27 Identities=30% Similarity=0.368 Sum_probs=22.5
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhcc
Q 014743 193 AQPKGVLLYGPPGTGKTLLARAVAHHT 219 (419)
Q Consensus 193 ~~p~~iLL~GPpGtGKT~LakalA~~~ 219 (419)
.+|.-++|.||+|+||||.+-.||..+
T Consensus 9 ~~p~vi~lvGptGvGKTTTiAKLAa~~ 35 (213)
T d1vmaa2 9 EPPFVIMVVGVNGTGKTTSCGKLAKMF 35 (213)
T ss_dssp SSCEEEEEECCTTSSHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHH
Confidence 467778999999999999888888644
No 98
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=97.51 E-value=3.7e-05 Score=72.88 Aligned_cols=69 Identities=20% Similarity=0.320 Sum_probs=47.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhccC--CceEEE-eCcchhh-------hhhchhHHHHHHHHHHHHhhCCceEEeccc
Q 014743 195 PKGVLLYGPPGTGKTLLARAVAHHTD--CTFIRV-SGSELVQ-------KYIGEGSRMVRELFVMAREHAPSIIFMDEI 263 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~LakalA~~~~--~~~i~v-~~s~l~~-------~~~g~~~~~i~~lf~~a~~~~psVl~iDEi 263 (419)
++++|+.||+|+||||++++++.+.. ..++.+ +..++.- ...+...-...+++..+.+..|..|++.|+
T Consensus 166 ~~nili~G~tgSGKTT~l~al~~~i~~~~rivtiEd~~El~l~~~~~~~~~~~~~~~~~~~ll~~~lR~~pd~iivgEi 244 (323)
T d1g6oa_ 166 GKNVIVCGGTGSGKTTYIKSIMEFIPKEERIISIEDTEEIVFKHHKNYTQLFFGGNITSADCLKSCLRMRPDRIILGEL 244 (323)
T ss_dssp TCCEEEEESTTSSHHHHHHHHGGGSCTTCCEEEEESSCCCCCSSCSSEEEEECBTTBCHHHHHHHHTTSCCSEEEESCC
T ss_pred CCCEEEEeeccccchHHHHHHhhhcccccceeeccchhhhhcccccccceeccccchhHHHHHHHHhccCCCcccCCcc
Confidence 46799999999999999999998763 334444 2223210 011112223567888889999999999996
No 99
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=97.51 E-value=2.8e-05 Score=66.87 Aligned_cols=35 Identities=23% Similarity=0.454 Sum_probs=28.3
Q ss_pred eEEEEcCCCChHHHHHHHHHhccCCceEEEeCcchhh
Q 014743 197 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQ 233 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~~ 233 (419)
.|+|.|||||||||+|+.||..++..++. ..+++.
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~g~~~is--~gdllr 36 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQADRIVEKYGTPHIS--TGDMFR 36 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCCEEE--HHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCceee--HHHHHH
Confidence 57899999999999999999999776554 445543
No 100
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=97.51 E-value=2.5e-05 Score=68.07 Aligned_cols=38 Identities=21% Similarity=0.470 Sum_probs=30.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcchhhh
Q 014743 195 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK 234 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~~~ 234 (419)
...++|.|||||||||+++.||..++.. .++..+++..
T Consensus 6 ~mrIiliG~PGSGKtT~a~~La~~~g~~--~is~gdllr~ 43 (189)
T d2ak3a1 6 LLRAAIMGAPGSGKGTVSSRITKHFELK--HLSSGDLLRD 43 (189)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHBCCE--EEEHHHHHHH
T ss_pred ceeEEEECCCCCCHHHHHHHHHHHHCCe--EEcHHHHHHH
Confidence 3568899999999999999999998755 4565666543
No 101
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.49 E-value=3.2e-05 Score=66.44 Aligned_cols=38 Identities=21% Similarity=0.453 Sum_probs=30.1
Q ss_pred CeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcchhhhh
Q 014743 196 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKY 235 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~~~~ 235 (419)
..++|.|||||||||+++.||..++.. .+++.+++..+
T Consensus 3 mrIvl~G~pGSGKtT~a~~La~~~g~~--~i~~~d~~~~~ 40 (180)
T d1akya1 3 IRMVLIGPPGAGKGTQAPNLQERFHAA--HLATGDMLRSQ 40 (180)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHCCE--EEEHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCc--eEeccccceec
Confidence 458899999999999999999998655 55556665443
No 102
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=97.45 E-value=3.4e-05 Score=66.00 Aligned_cols=29 Identities=24% Similarity=0.345 Sum_probs=25.3
Q ss_pred eEEEEcCCCChHHHHHHHHHhccCCceEE
Q 014743 197 GVLLYGPPGTGKTLLARAVAHHTDCTFIR 225 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~~~~~~~i~ 225 (419)
.++|.|||||||||+++.||..++..++.
T Consensus 2 ~I~i~G~pGSGKsT~~~~La~~~~~~~i~ 30 (179)
T d1e4va1 2 RIILLGAPVAGKGTQAQFIMEKYGIPQIS 30 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHCCCEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCceec
Confidence 57899999999999999999999766553
No 103
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=97.38 E-value=4.7e-05 Score=66.80 Aligned_cols=34 Identities=24% Similarity=0.452 Sum_probs=27.7
Q ss_pred eEEEEcCCCChHHHHHHHHHhccCCceEEEeCcchh
Q 014743 197 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV 232 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~ 232 (419)
-|.+.|||||||||+|+.||+.++.++ ++..+++
T Consensus 5 iI~I~GppGSGKgT~ak~La~~~gl~~--iStGdLl 38 (225)
T d1ckea_ 5 VITIDGPSGAGKGTLCKAMAEALQWHL--LDSGAIY 38 (225)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCEE--EEHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCcE--ECHHHHH
Confidence 677889999999999999999996654 5555554
No 104
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=97.37 E-value=0.00021 Score=64.88 Aligned_cols=28 Identities=29% Similarity=0.391 Sum_probs=22.8
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHHhc
Q 014743 191 GIAQPKGVLLYGPPGTGKTLLARAVAHH 218 (419)
Q Consensus 191 gi~~p~~iLL~GPpGtGKT~LakalA~~ 218 (419)
|+.++.-.+|+|+||+|||+++-.+|..
T Consensus 25 G~~pg~~~~i~G~~G~GKS~l~l~la~~ 52 (274)
T d1nlfa_ 25 NMVAGTVGALVSPGGAGKSMLALQLAAQ 52 (274)
T ss_dssp TEETTSEEEEEESTTSSHHHHHHHHHHH
T ss_pred CccCCcEEEEEeCCCCCHHHHHHHHHHH
Confidence 3445677899999999999999888753
No 105
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=97.27 E-value=6.3e-05 Score=66.27 Aligned_cols=32 Identities=22% Similarity=0.532 Sum_probs=25.6
Q ss_pred EEEEcCCCChHHHHHHHHHhccCCceEEEeCcch
Q 014743 198 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL 231 (419)
Q Consensus 198 iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l 231 (419)
|.+.|||||||||+|+.||.+++.+++ +..++
T Consensus 6 IaIdGp~GsGKgT~ak~La~~lg~~~i--stGdl 37 (223)
T d1q3ta_ 6 IAIDGPASSGKSTVAKIIAKDFGFTYL--DTGAM 37 (223)
T ss_dssp EEEECSSCSSHHHHHHHHHHHHCCEEE--EHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCcEE--CHHHH
Confidence 456799999999999999999977644 44444
No 106
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=97.22 E-value=0.00039 Score=61.77 Aligned_cols=28 Identities=36% Similarity=0.468 Sum_probs=25.0
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHHhc
Q 014743 191 GIAQPKGVLLYGPPGTGKTLLARAVAHH 218 (419)
Q Consensus 191 gi~~p~~iLL~GPpGtGKT~LakalA~~ 218 (419)
|++++.-++|+||||||||+++-.+|..
T Consensus 32 Glp~G~~~li~G~pGsGKT~~~lq~~~~ 59 (254)
T d1pzna2 32 GIETQAITEVFGEFGSGKTQLAHTLAVM 59 (254)
T ss_dssp SEESSEEEEEEESTTSSHHHHHHHHHHH
T ss_pred CccCCEEEEEEcCCCCCHHHHHHHHHHH
Confidence 6888888999999999999999988753
No 107
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=97.19 E-value=0.00011 Score=61.94 Aligned_cols=25 Identities=28% Similarity=0.409 Sum_probs=22.2
Q ss_pred CeEEEEcCCCChHHHHHHHHHhccC
Q 014743 196 KGVLLYGPPGTGKTLLARAVAHHTD 220 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~LakalA~~~~ 220 (419)
+-|+|.|||||||||+++.|+..++
T Consensus 2 kiI~i~G~~GsGKsT~~~~L~~~l~ 26 (190)
T d1khta_ 2 KVVVVTGVPGVGSTTSSQLAMDNLR 26 (190)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHH
Confidence 4588999999999999999998763
No 108
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=97.18 E-value=0.0002 Score=57.44 Aligned_cols=20 Identities=30% Similarity=0.237 Sum_probs=17.2
Q ss_pred CCCCeEEEEcCCCChHHHHH
Q 014743 193 AQPKGVLLYGPPGTGKTLLA 212 (419)
Q Consensus 193 ~~p~~iLL~GPpGtGKT~La 212 (419)
+.+..++|++|||+|||..+
T Consensus 5 ~~~~~~il~~~tGsGKT~~~ 24 (140)
T d1yksa1 5 KKGMTTVLDFHPGAGKTRRF 24 (140)
T ss_dssp STTCEEEECCCTTSSTTTTH
T ss_pred HcCCcEEEEcCCCCChhHHH
Confidence 45788999999999999665
No 109
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=97.15 E-value=0.00011 Score=64.94 Aligned_cols=41 Identities=22% Similarity=0.322 Sum_probs=33.7
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhcc----CCceEEEeCcchhh
Q 014743 193 AQPKGVLLYGPPGTGKTLLARAVAHHT----DCTFIRVSGSELVQ 233 (419)
Q Consensus 193 ~~p~~iLL~GPpGtGKT~LakalA~~~----~~~~i~v~~s~l~~ 233 (419)
..|..|.|+|.||+||||+|++|+..+ +.+++.+++..+..
T Consensus 22 ~kg~vIwltGlsGsGKTTia~~L~~~l~~~~~~~~~~ldgD~iR~ 66 (208)
T d1m7ga_ 22 QRGLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIRF 66 (208)
T ss_dssp SSCEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCEEEECHHHHTT
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHHhcCceEEEEcchHHHH
Confidence 466779999999999999999999754 56788888876543
No 110
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=97.11 E-value=9.4e-05 Score=61.76 Aligned_cols=23 Identities=26% Similarity=0.218 Sum_probs=21.0
Q ss_pred eEEEEcCCCChHHHHHHHHHhcc
Q 014743 197 GVLLYGPPGTGKTLLARAVAHHT 219 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~~~ 219 (419)
-+.|.|+||||||||++.|++++
T Consensus 4 vi~itG~~GSGKTTL~~~L~~~l 26 (170)
T d1np6a_ 4 LLAFAAWSGTGKTTLLKKLIPAL 26 (170)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCHHHHHHHHHHHH
Confidence 47899999999999999999875
No 111
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=97.08 E-value=0.00016 Score=61.83 Aligned_cols=44 Identities=23% Similarity=0.163 Sum_probs=30.1
Q ss_pred HHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhccC
Q 014743 167 DQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTD 220 (419)
Q Consensus 167 ~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~~ 220 (419)
.+.+..|...+... . -..|--|.+.||+||||||+|+.|+..++
T Consensus 4 ~~~~~~~~~~~~~~-~---------~~~~~iIgI~G~~GSGKSTla~~L~~~l~ 47 (198)
T d1rz3a_ 4 RDRIDFLCKTILAI-K---------TAGRLVLGIDGLSRSGKTTLANQLSQTLR 47 (198)
T ss_dssp HHHHHHHHHHHHTS-C---------CSSSEEEEEEECTTSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-c---------CCCCEEEEEECCCCCCHHHHHHHHHHHhc
Confidence 45566666666431 1 12233466899999999999999998653
No 112
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.99 E-value=0.00016 Score=62.01 Aligned_cols=28 Identities=29% Similarity=0.366 Sum_probs=25.5
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHHhc
Q 014743 191 GIAQPKGVLLYGPPGTGKTLLARAVAHH 218 (419)
Q Consensus 191 gi~~p~~iLL~GPpGtGKT~LakalA~~ 218 (419)
|++++.-++|+||||+|||+++-.+|..
T Consensus 19 Gi~~G~v~~i~G~~GsGKT~l~l~la~~ 46 (242)
T d1n0wa_ 19 GIETGSITEMFGEFRTGKTQICHTLAVT 46 (242)
T ss_dssp SEETTSEEEEECCTTSSHHHHHHHHHHH
T ss_pred CCcCCEEEEEEeCCCCCHHHHHHHHHHH
Confidence 6888999999999999999999999864
No 113
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=96.95 E-value=0.0018 Score=61.70 Aligned_cols=20 Identities=35% Similarity=0.537 Sum_probs=16.5
Q ss_pred CeEEEEcCCCChHHHHHHHH
Q 014743 196 KGVLLYGPPGTGKTLLARAV 215 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~Lakal 215 (419)
+-+++.||||||||+++..+
T Consensus 164 ~~~vI~G~pGTGKTt~i~~~ 183 (359)
T d1w36d1 164 RISVISGGPGTGKTTTVAKL 183 (359)
T ss_dssp SEEEEECCTTSTHHHHHHHH
T ss_pred CeEEEEcCCCCCceehHHHH
Confidence 46789999999999987544
No 114
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=96.83 E-value=0.00016 Score=61.23 Aligned_cols=25 Identities=28% Similarity=0.341 Sum_probs=21.9
Q ss_pred eEEEEcCCCChHHHHHHHHHhccCC
Q 014743 197 GVLLYGPPGTGKTLLARAVAHHTDC 221 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~~~~~ 221 (419)
-++|.|+||+||||+++.|+..++.
T Consensus 3 iivi~G~~GsGKTT~~~~La~~L~~ 27 (194)
T d1nksa_ 3 IGIVTGIPGVGKSTVLAKVKEILDN 27 (194)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHH
Confidence 3678999999999999999998743
No 115
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=96.79 E-value=0.0015 Score=53.82 Aligned_cols=21 Identities=38% Similarity=0.580 Sum_probs=19.4
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.|+|.|+||+|||+|.++|.+
T Consensus 3 kI~lvG~~nvGKSsLin~l~~ 23 (161)
T d2gj8a1 3 KVVIAGRPNAGKSSLLNALAG 23 (161)
T ss_dssp EEEEEESTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 589999999999999999975
No 116
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.77 E-value=0.00039 Score=59.88 Aligned_cols=27 Identities=30% Similarity=0.554 Sum_probs=23.1
Q ss_pred eEEEEcCCCChHHHHHHHHHhccCCce
Q 014743 197 GVLLYGPPGTGKTLLARAVAHHTDCTF 223 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~~~~~~~ 223 (419)
-|+|+||||+|||+|++.|+.+....+
T Consensus 3 pIvl~GpsG~GK~tl~~~L~~~~~~~~ 29 (186)
T d1gkya_ 3 PIVISGPSGTGKSTLLKKLFAEYPDSF 29 (186)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHCTTTE
T ss_pred eEEEECCCCCCHHHHHHHHHHhCCcce
Confidence 389999999999999999998765443
No 117
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.73 E-value=0.00038 Score=61.73 Aligned_cols=27 Identities=30% Similarity=0.319 Sum_probs=25.0
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHHh
Q 014743 191 GIAQPKGVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 191 gi~~p~~iLL~GPpGtGKT~LakalA~ 217 (419)
|++++.-++|+||||||||+++..+|.
T Consensus 33 Gip~G~~~~i~G~~GsGKT~lalq~~~ 59 (258)
T d1v5wa_ 33 GIESMAITEAFGEFRTGKTQLSHTLCV 59 (258)
T ss_dssp SBCSSEEEEEECCTTCTHHHHHHHHHH
T ss_pred CCcCCEEEEEECCCCCCHHHHHHHHHH
Confidence 788888999999999999999999985
No 118
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=96.68 E-value=0.01 Score=49.71 Aligned_cols=22 Identities=27% Similarity=0.345 Sum_probs=19.9
Q ss_pred eEEEEcCCCChHHHHHHHHHhc
Q 014743 197 GVLLYGPPGTGKTLLARAVAHH 218 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~~ 218 (419)
.|.|.|.||+|||+|+++|.+.
T Consensus 7 ~I~lvG~~~~GKSSLin~l~~~ 28 (178)
T d1wf3a1 7 FVAIVGKPNVGKSTLLNNLLGV 28 (178)
T ss_dssp EEEEECSTTSSHHHHHHHHHTS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4899999999999999999863
No 119
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.67 E-value=0.00046 Score=59.69 Aligned_cols=27 Identities=33% Similarity=0.587 Sum_probs=23.2
Q ss_pred EEEEcCCCChHHHHHHHHHhccCCceE
Q 014743 198 VLLYGPPGTGKTLLARAVAHHTDCTFI 224 (419)
Q Consensus 198 iLL~GPpGtGKT~LakalA~~~~~~~i 224 (419)
|+|.||||+|||++++.|+...+..+.
T Consensus 3 Ivl~GPsGsGK~tl~~~L~~~~~~~~~ 29 (190)
T d1lvga_ 3 VVLSGPSGAGKSTLLKKLFQEHSSIFG 29 (190)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHTTTEE
T ss_pred EEEECCCCCCHHHHHHHHHHhCCCcee
Confidence 789999999999999999987755443
No 120
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.59 E-value=0.00058 Score=58.26 Aligned_cols=26 Identities=27% Similarity=0.491 Sum_probs=22.7
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhccC
Q 014743 195 PKGVLLYGPPGTGKTLLARAVAHHTD 220 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~LakalA~~~~ 220 (419)
++-|+|.||||+||||+++.|..+..
T Consensus 2 G~iivl~GpsG~GK~tl~~~L~~~~~ 27 (182)
T d1znwa1 2 GRVVVLSGPSAVGKSTVVRCLRERIP 27 (182)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHST
T ss_pred CeEEEEECCCCCCHHHHHHHHHhhCC
Confidence 45688999999999999999998753
No 121
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=96.48 E-value=0.0071 Score=50.33 Aligned_cols=21 Identities=33% Similarity=0.569 Sum_probs=19.3
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.|.|.|+||+|||+|+++|.+
T Consensus 2 ~V~liG~~n~GKSsLi~~L~~ 22 (171)
T d1mkya1 2 TVLIVGRPNVGKSTLFNKLVK 22 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 478999999999999999975
No 122
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.44 E-value=0.0015 Score=54.53 Aligned_cols=21 Identities=24% Similarity=0.468 Sum_probs=19.3
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.|++.|++|||||+|+..+.+
T Consensus 5 Ki~viG~~~vGKTsli~~l~~ 25 (166)
T d1ctqa_ 5 KLVVVGAGGVGKSALTIQLIQ 25 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 379999999999999999986
No 123
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=96.43 E-value=0.0029 Score=51.49 Aligned_cols=21 Identities=24% Similarity=0.357 Sum_probs=19.3
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.|+|.|+||||||+|++.+..
T Consensus 2 kivlvG~~~vGKSsLi~~l~~ 22 (160)
T d1r8sa_ 2 RILMVGLDAAGKTTILYKLKL 22 (160)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhc
Confidence 478999999999999999985
No 124
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.42 E-value=0.0095 Score=50.22 Aligned_cols=21 Identities=29% Similarity=0.409 Sum_probs=19.2
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.++|.|++|||||+|++.+.+
T Consensus 7 Ki~ivG~~~vGKTsLi~~l~~ 27 (186)
T d2f7sa1 7 KLLALGDSGVGKTTFLYRYTD 27 (186)
T ss_dssp EEEEESCTTSSHHHHHHHHHC
T ss_pred EEEEECCCCcCHHHHHHHHhc
Confidence 378999999999999999985
No 125
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=96.40 E-value=0.0051 Score=57.71 Aligned_cols=69 Identities=22% Similarity=0.363 Sum_probs=44.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhcc-----CCceEEEeCcchhh----------------------------hhhchhHH
Q 014743 195 PKGVLLYGPPGTGKTLLARAVAHHT-----DCTFIRVSGSELVQ----------------------------KYIGEGSR 241 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~LakalA~~~-----~~~~i~v~~s~l~~----------------------------~~~g~~~~ 241 (419)
...|-+.||||+|||||+.+++..+ ...++.++.+.-.+ .+.|....
T Consensus 54 ~~~IgitG~pGaGKSTLi~~l~~~~~~~g~~vavlavDpss~~~ggailgdr~rm~~~~~~~~~~ir~~~~~g~lgg~~~ 133 (327)
T d2p67a1 54 TLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSILGDKTRMNDLARAEAAFIRPVPSSGHLGGASQ 133 (327)
T ss_dssp SEEEEEEECTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC---------------CTTTTCTTEEEEEECC-----CHHH
T ss_pred ceEEEeeCCCCCCHHHHHHHHHHHHHhcCCceeeecCCCceeeeccccccchhHHHHhcccccccccccccccccccchh
Confidence 4458899999999999999998643 23455665543211 12333344
Q ss_pred HHHHHHHHHHhhCCceEEeccc
Q 014743 242 MVRELFVMAREHAPSIIFMDEI 263 (419)
Q Consensus 242 ~i~~lf~~a~~~~psVl~iDEi 263 (419)
...+....+....++++|++-+
T Consensus 134 ~~~~~~~~~~~~g~d~iliEtv 155 (327)
T d2p67a1 134 RARELMLLCEAAGYDVVIVETV 155 (327)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEE
T ss_pred hhhHHHHHHHhcCCCeEEEeec
Confidence 5566666667777889998774
No 126
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.28 E-value=0.001 Score=58.01 Aligned_cols=27 Identities=15% Similarity=0.187 Sum_probs=22.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhccCC
Q 014743 195 PKGVLLYGPPGTGKTLLARAVAHHTDC 221 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~LakalA~~~~~ 221 (419)
|--|.+.||+||||||+++.|+..++.
T Consensus 2 P~iIgI~G~~gSGKSTla~~L~~~l~~ 28 (213)
T d1uj2a_ 2 PFLIGVSGGTASGKSSVCAKIVQLLGQ 28 (213)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHTTG
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHhch
Confidence 445779999999999999999987743
No 127
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=96.28 E-value=0.0076 Score=52.28 Aligned_cols=51 Identities=25% Similarity=0.188 Sum_probs=35.7
Q ss_pred cccCcHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhccCCceEEEeC
Q 014743 162 MIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 228 (419)
Q Consensus 162 ~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~ 228 (419)
++--.+.|.+.+..++. ..+.++.+|+|+|||.++-.++.+++...+.+..
T Consensus 68 ~~~Lr~yQ~eav~~~~~----------------~~~~ll~~~tG~GKT~~a~~~~~~~~~~~Liv~p 118 (206)
T d2fz4a1 68 EISLRDYQEKALERWLV----------------DKRGCIVLPTGSGKTHVAMAAINELSTPTLIVVP 118 (206)
T ss_dssp CCCCCHHHHHHHHHHTT----------------TSEEEEEESSSTTHHHHHHHHHHHSCSCEEEEES
T ss_pred CCCcCHHHHHHHHHHHh----------------CCCcEEEeCCCCCceehHHhHHHHhcCceeEEEc
Confidence 34456667776665432 1345788999999999999888888777665555
No 128
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=96.27 E-value=0.0041 Score=51.79 Aligned_cols=25 Identities=24% Similarity=0.347 Sum_probs=21.5
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhc
Q 014743 194 QPKGVLLYGPPGTGKTLLARAVAHH 218 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~LakalA~~ 218 (419)
.-..++|.|.||||||+|+..+...
T Consensus 14 k~~kI~vvG~~~~GKSsLi~rl~~~ 38 (177)
T d1zj6a1 14 QEHKVIIVGLDNAGKTTILYQFSMN 38 (177)
T ss_dssp SCEEEEEEESTTSSHHHHHHHHHTT
T ss_pred CeEEEEEECCCCCCHHHHHHHHhcC
Confidence 3356999999999999999999863
No 129
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.27 E-value=0.0038 Score=52.15 Aligned_cols=21 Identities=52% Similarity=0.795 Sum_probs=19.1
Q ss_pred EEEEcCCCChHHHHHHHHHhc
Q 014743 198 VLLYGPPGTGKTLLARAVAHH 218 (419)
Q Consensus 198 iLL~GPpGtGKT~LakalA~~ 218 (419)
++|.|++|+|||+|++.+.+.
T Consensus 4 i~lvG~~~vGKTsLi~~~~~~ 24 (168)
T d2gjsa1 4 VLLLGAPGVGKSALARIFGGV 24 (168)
T ss_dssp EEEECCTTSSHHHHHHHHHTC
T ss_pred EEEECCCCcCHHHHHHHHhCC
Confidence 789999999999999999763
No 130
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=96.23 E-value=0.00088 Score=58.76 Aligned_cols=28 Identities=21% Similarity=0.290 Sum_probs=25.1
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHHhc
Q 014743 191 GIAQPKGVLLYGPPGTGKTLLARAVAHH 218 (419)
Q Consensus 191 gi~~p~~iLL~GPpGtGKT~LakalA~~ 218 (419)
|++++.-++|+||||+|||+++-.+|..
T Consensus 30 Gl~~G~l~~i~G~~G~GKT~~~l~~a~~ 57 (258)
T d2i1qa2 30 GLESQSVTEFAGVFGSGKTQIMHQSCVN 57 (258)
T ss_dssp SEETTEEEEEEESTTSSHHHHHHHHHHH
T ss_pred CccCCeEEEEEeCCCCCHHHHHHHHHHH
Confidence 4778888999999999999999999863
No 131
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=96.21 E-value=0.011 Score=48.88 Aligned_cols=21 Identities=29% Similarity=0.366 Sum_probs=19.2
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.++|.|++|+|||+|++.+..
T Consensus 4 ki~i~G~~~~GKTsLl~~l~~ 24 (164)
T d1zd9a1 4 ELTLVGLQYSGKTTFVNVIAS 24 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHc
Confidence 478999999999999999976
No 132
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=96.20 E-value=0.0037 Score=57.03 Aligned_cols=58 Identities=26% Similarity=0.332 Sum_probs=38.5
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcchhhhhhchhHHHHHHHHHHHHhhCCceEEeccccc
Q 014743 193 AQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDS 265 (419)
Q Consensus 193 ~~p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~~~~~g~~~~~i~~lf~~a~~~~psVl~iDEiD~ 265 (419)
+.-+.+.|+||++||||+++.+|+..++.. ..++.+. + -|..+....-.++++||.+.
T Consensus 102 ~k~n~~~l~G~~~tGKS~f~~~i~~~lg~~-~~~~~~~--~------------~f~l~~l~~k~~~~~~e~~~ 159 (267)
T d1u0ja_ 102 GKRNTIWLFGPATTGKTNIAEAIAHTVPFY-GCVNWTN--E------------NFPFNDCVDKMVIWWEEGKM 159 (267)
T ss_dssp TTCCEEEEECSTTSSHHHHHHHHHHHSSCE-EECCTTC--S------------SCTTGGGSSCSEEEECSCCE
T ss_pred CccEEEEEEcCCCCCHHHHHHHHHHHhcch-hhccccC--C------------CccccccCCCEEEEEeCCCc
Confidence 445678999999999999999999988542 2222111 1 12233344456899999654
No 133
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.20 E-value=0.0042 Score=53.51 Aligned_cols=22 Identities=36% Similarity=0.455 Sum_probs=20.3
Q ss_pred CeEEEEcCCCChHHHHHHHHHh
Q 014743 196 KGVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~LakalA~ 217 (419)
+.|+|.|+||+|||+|.+++..
T Consensus 1 k~V~ivG~~~~GKTsLl~~l~~ 22 (207)
T d2fh5b1 1 RAVLFVGLCDSGKTLLFVRLLT 22 (207)
T ss_dssp CEEEEECSTTSSHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHc
Confidence 4789999999999999999986
No 134
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=96.18 E-value=0.0041 Score=55.03 Aligned_cols=35 Identities=17% Similarity=0.184 Sum_probs=23.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhc---cCCceEEEeC
Q 014743 194 QPKGVLLYGPPGTGKTLLARAVAHH---TDCTFIRVSG 228 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~LakalA~~---~~~~~i~v~~ 228 (419)
.++.+++.+|+|+|||+.+-..+-. -+...+.+..
T Consensus 57 ~g~~~~i~apTGsGKT~~~~~~~~~~~~~~~rvliv~P 94 (237)
T d1gkub1 57 RKESFAATAPTGVGKTSFGLAMSLFLALKGKRCYVIFP 94 (237)
T ss_dssp TTCCEECCCCBTSCSHHHHHHHHHHHHTTSCCEEEEES
T ss_pred CCCCEEEEecCCChHHHHHHHHHHHHHHhcCeEEEEec
Confidence 3578999999999999866554432 2444555544
No 135
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=96.17 E-value=0.0065 Score=50.63 Aligned_cols=22 Identities=36% Similarity=0.505 Sum_probs=19.9
Q ss_pred CeEEEEcCCCChHHHHHHHHHh
Q 014743 196 KGVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~LakalA~ 217 (419)
-.+++.|+||+|||+|++.+..
T Consensus 17 ~kI~vvG~~~vGKSsLi~~l~~ 38 (176)
T d1fzqa_ 17 VRILLLGLDNAGKTTLLKQLAS 38 (176)
T ss_dssp EEEEEEESTTSSHHHHHHHHCC
T ss_pred EEEEEECCCCCCHHHHHHHHhc
Confidence 4599999999999999999975
No 136
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=96.12 E-value=0.001 Score=58.12 Aligned_cols=34 Identities=24% Similarity=0.490 Sum_probs=28.5
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHHhccCCceE
Q 014743 191 GIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFI 224 (419)
Q Consensus 191 gi~~p~~iLL~GPpGtGKT~LakalA~~~~~~~i 224 (419)
|.+.-+.++|+|||+||||+++.+|++.++...+
T Consensus 49 ~~PKkn~i~~~GP~~TGKS~f~~sl~~~l~G~vi 82 (205)
T d1tuea_ 49 GTPKKNCLVFCGPANTGKSYFGMSFIHFIQGAVI 82 (205)
T ss_dssp TCTTCSEEEEESCGGGCHHHHHHHHHHHHTCEEC
T ss_pred CCCCceEEEEECCCCccHHHHHHHHHHHhCCEEE
Confidence 5566678999999999999999999998865443
No 137
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.10 E-value=0.0054 Score=50.89 Aligned_cols=21 Identities=29% Similarity=0.482 Sum_probs=19.3
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.++|.|++|||||+|++.+.+
T Consensus 5 Ki~lvG~~~vGKTsLi~r~~~ 25 (167)
T d1kaoa_ 5 KVVVLGSGGVGKSALTVQFVT 25 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 479999999999999999986
No 138
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.10 E-value=0.0014 Score=54.84 Aligned_cols=23 Identities=22% Similarity=0.104 Sum_probs=20.3
Q ss_pred eEEEEcCCCChHHHHHHHHHhcc
Q 014743 197 GVLLYGPPGTGKTLLARAVAHHT 219 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~~~ 219 (419)
-+.+.|++|||||||+..|+.++
T Consensus 3 ii~I~G~~gSGKTTli~~l~~~L 25 (165)
T d1xjca_ 3 VWQVVGYKHSGKTTLMEKWVAAA 25 (165)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHH
Confidence 35699999999999999999865
No 139
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.08 E-value=0.0078 Score=52.48 Aligned_cols=33 Identities=15% Similarity=0.108 Sum_probs=25.6
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhcc---CCceEEEe
Q 014743 195 PKGVLLYGPPGTGKTLLARAVAHHT---DCTFIRVS 227 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~LakalA~~~---~~~~i~v~ 227 (419)
+.-|.|.||.|+||||+++.|++.+ +.+++.+.
T Consensus 3 G~lI~ieG~dGsGKsT~~~~L~~~L~~~g~~v~~~~ 38 (209)
T d1nn5a_ 3 GALIVLEGVDRAGKSTQSRKLVEALCAAGHRAELLR 38 (209)
T ss_dssp CCEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred eeEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEe
Confidence 4456777999999999999999866 45555553
No 140
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.05 E-value=0.01 Score=49.59 Aligned_cols=21 Identities=24% Similarity=0.411 Sum_probs=19.4
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.|+|.|.+|||||+|++.+..
T Consensus 8 Kv~lvG~~~vGKTsLi~r~~~ 28 (173)
T d2fn4a1 8 KLVVVGGGGVGKSALTIQFIQ 28 (173)
T ss_dssp EEEEEECTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 599999999999999999886
No 141
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=96.04 E-value=0.0024 Score=55.88 Aligned_cols=26 Identities=23% Similarity=0.359 Sum_probs=22.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhccC
Q 014743 195 PKGVLLYGPPGTGKTLLARAVAHHTD 220 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~LakalA~~~~ 220 (419)
++-|+|.||+|+|||+|.+.|.....
T Consensus 2 G~livi~GPSG~GK~tl~~~L~~~~p 27 (205)
T d1s96a_ 2 GTLYIVSAPSGAGKSSLIQALLKTQP 27 (205)
T ss_dssp CCEEEEECCTTSCHHHHHHHHHHHSC
T ss_pred CeEEEEECCCCCCHHHHHHHHHhhCC
Confidence 45688999999999999999988653
No 142
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=96.03 E-value=0.0022 Score=54.78 Aligned_cols=30 Identities=20% Similarity=0.285 Sum_probs=24.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhccCCceE
Q 014743 194 QPKGVLLYGPPGTGKTLLARAVAHHTDCTFI 224 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~LakalA~~~~~~~i 224 (419)
.|.-|.++|++||||||+|+.|. +.+.+++
T Consensus 2 ~p~IIgitG~~gSGKstva~~l~-~~g~~~~ 31 (191)
T d1uf9a_ 2 HPIIIGITGNIGSGKSTVAALLR-SWGYPVL 31 (191)
T ss_dssp CCEEEEEEECTTSCHHHHHHHHH-HTTCCEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHH-HCCCeEE
Confidence 35667899999999999999995 4666654
No 143
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.02 E-value=0.0019 Score=55.18 Aligned_cols=25 Identities=20% Similarity=0.440 Sum_probs=21.7
Q ss_pred CeEEEEcCCCChHHHHHHHHHhccC
Q 014743 196 KGVLLYGPPGTGKTLLARAVAHHTD 220 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~LakalA~~~~ 220 (419)
+.++|.||+|+|||+|++.|.....
T Consensus 4 k~ivl~Gpsg~GK~tl~~~L~~~~~ 28 (178)
T d1kgda_ 4 KTLVLLGAHGVGRRHIKNTLITKHP 28 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHCT
T ss_pred CcEEEECCCCCCHHHHHHHHHHhCC
Confidence 4589999999999999999987543
No 144
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.00 E-value=0.0037 Score=57.56 Aligned_cols=40 Identities=20% Similarity=0.335 Sum_probs=29.3
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhcc------CCceEEEeCcchh
Q 014743 193 AQPKGVLLYGPPGTGKTLLARAVAHHT------DCTFIRVSGSELV 232 (419)
Q Consensus 193 ~~p~~iLL~GPpGtGKT~LakalA~~~------~~~~i~v~~s~l~ 232 (419)
..|--|.|.|++|||||||+..|...+ ...+..++..+|.
T Consensus 25 ~~P~iIGi~G~qGSGKSTl~~~l~~~L~~~~~~~~~v~~iS~DdfY 70 (286)
T d1odfa_ 25 KCPLFIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDFY 70 (286)
T ss_dssp CSCEEEEEECCTTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGGB
T ss_pred CCCEEEEeECCCCCCHHHHHHHHHHHHHHHhCCCcceEeeccCCCC
Confidence 445567789999999999999887654 3455666666653
No 145
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=95.99 E-value=0.0057 Score=57.23 Aligned_cols=69 Identities=19% Similarity=0.282 Sum_probs=45.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhcc-----CCceEEEeCcchhhh----------------------------hhchhHH
Q 014743 195 PKGVLLYGPPGTGKTLLARAVAHHT-----DCTFIRVSGSELVQK----------------------------YIGEGSR 241 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~LakalA~~~-----~~~~i~v~~s~l~~~----------------------------~~g~~~~ 241 (419)
...+-+.||||+|||||+..++..+ ...++.++.+.-.+. ..|....
T Consensus 51 ~~~igitG~pGaGKSTli~~l~~~~~~~g~~vaViavDpss~~~gg~llgdr~rm~~~~~~~~~~ir~~~~~~~~gg~~~ 130 (323)
T d2qm8a1 51 AIRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSSTRTGGSILGDKTRMARLAIDRNAFIRPSPSSGTLGGVAA 130 (323)
T ss_dssp SEEEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEECGGGGSSCCCSSCCGGGSTTGGGCTTEEEECCCCCSSHHHHHH
T ss_pred ceEEeeeCCCCCCHHHHHHHHHHHHhhcCCceeeeecccccHHHHhccccchhhHHHHhcccceeeccccccccccchhH
Confidence 3458899999999999999998743 445677766532110 1122334
Q ss_pred HHHHHHHHHHhhCCceEEeccc
Q 014743 242 MVRELFVMAREHAPSIIFMDEI 263 (419)
Q Consensus 242 ~i~~lf~~a~~~~psVl~iDEi 263 (419)
.++...........+++|+.-+
T Consensus 131 ~~~~~i~~~~~~g~d~iiiETV 152 (323)
T d2qm8a1 131 KTRETMLLCEAAGFDVILVETV 152 (323)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEC
T ss_pred HHHHHHHhhccCCCCeEEEeeh
Confidence 4555555666677889998764
No 146
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=95.96 E-value=0.0043 Score=53.51 Aligned_cols=19 Identities=53% Similarity=0.667 Sum_probs=16.3
Q ss_pred CCeEEEEcCCCChHHHHHH
Q 014743 195 PKGVLLYGPPGTGKTLLAR 213 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~Lak 213 (419)
++.+++.+|+|+|||+.+-
T Consensus 40 ~~~~il~apTGsGKT~~a~ 58 (202)
T d2p6ra3 40 GKNLLLAMPTAAGKTLLAE 58 (202)
T ss_dssp CSCEEEECSSHHHHHHHHH
T ss_pred CCCEEEEcCCCCchhHHHH
Confidence 5678999999999998763
No 147
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=95.96 E-value=0.0029 Score=53.09 Aligned_cols=30 Identities=30% Similarity=0.359 Sum_probs=25.6
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhccCCc
Q 014743 193 AQPKGVLLYGPPGTGKTLLARAVAHHTDCT 222 (419)
Q Consensus 193 ~~p~~iLL~GPpGtGKT~LakalA~~~~~~ 222 (419)
+++.-++|.|+=|+|||+++|.+++.++..
T Consensus 31 ~~g~ii~L~G~LGaGKTtfvr~~~~~lg~~ 60 (158)
T d1htwa_ 31 EKAIMVYLNGDLGAGKTTLTRGMLQGIGHQ 60 (158)
T ss_dssp SSCEEEEEECSTTSSHHHHHHHHHHHTTCC
T ss_pred CCCeEEEEecCCCccHHHHHHHHHhhcccc
Confidence 455668899999999999999999987653
No 148
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.80 E-value=0.018 Score=48.92 Aligned_cols=22 Identities=27% Similarity=0.560 Sum_probs=20.4
Q ss_pred eEEEEcCCCChHHHHHHHHHhc
Q 014743 197 GVLLYGPPGTGKTLLARAVAHH 218 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~~ 218 (419)
.|+|.|+||+|||+|..+|.+.
T Consensus 5 ~V~lvG~~n~GKTSLln~l~~~ 26 (209)
T d1nrjb_ 5 SIIIAGPQNSGKTSLLTLLTTD 26 (209)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 7899999999999999999864
No 149
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=95.79 E-value=0.0021 Score=55.00 Aligned_cols=32 Identities=28% Similarity=0.350 Sum_probs=26.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhccCCceE
Q 014743 193 AQPKGVLLYGPPGTGKTLLARAVAHHTDCTFI 224 (419)
Q Consensus 193 ~~p~~iLL~GPpGtGKT~LakalA~~~~~~~i 224 (419)
..|.-|.|.|+.|+||||+++.|++.++...+
T Consensus 7 ~kp~~I~ieG~~GsGKTTl~~~L~~~l~~~~~ 38 (197)
T d2vp4a1 7 TQPFTVLIEGNIGSGKTTYLNHFEKYKNDICL 38 (197)
T ss_dssp CCCEEEEEECSTTSCHHHHHHTTGGGTTTEEE
T ss_pred CCceEEEEECCCCCCHHHHHHHHHHHhCCcEE
Confidence 45667889999999999999999998865433
No 150
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=95.77 E-value=0.0033 Score=53.67 Aligned_cols=25 Identities=32% Similarity=0.448 Sum_probs=22.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhc
Q 014743 194 QPKGVLLYGPPGTGKTLLARAVAHH 218 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~LakalA~~ 218 (419)
.+.++||.||||+|||++|-.+...
T Consensus 13 ~g~gvl~~G~sG~GKStlal~l~~~ 37 (176)
T d1kkma_ 13 YGLGVLITGDSGVGKSETALELVQR 37 (176)
T ss_dssp TTEEEEEECCTTSCHHHHHHHHHHT
T ss_pred CCEEEEEEeCCCCCHHHHHHHHHHc
Confidence 4689999999999999999988864
No 151
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.75 E-value=0.0075 Score=49.86 Aligned_cols=21 Identities=14% Similarity=0.314 Sum_probs=19.1
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.++|.|+||||||+|+..+.+
T Consensus 4 Kv~liG~~~vGKSsLi~rl~~ 24 (164)
T d1z2aa1 4 KMVVVGNGAVGKSSMIQRYCK 24 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 479999999999999998885
No 152
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=95.72 E-value=0.01 Score=53.46 Aligned_cols=25 Identities=20% Similarity=0.379 Sum_probs=21.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhc
Q 014743 194 QPKGVLLYGPPGTGKTLLARAVAHH 218 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~LakalA~~ 218 (419)
.+-.|+|.|.||+|||+|+.+|.++
T Consensus 31 ~~l~I~LvG~tg~GKSSliN~ilg~ 55 (257)
T d1h65a_ 31 NSLTILVMGKGGVGKSSTVNSIIGE 55 (257)
T ss_dssp CEEEEEEEESTTSSHHHHHHHHHTS
T ss_pred CCcEEEEECCCCCcHHHHHHHHhCC
Confidence 4567999999999999999999863
No 153
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=95.68 E-value=0.0079 Score=50.09 Aligned_cols=21 Identities=29% Similarity=0.450 Sum_probs=19.3
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.++|.|.+|||||+|++.+..
T Consensus 6 KivlvG~~~vGKTsli~~~~~ 26 (168)
T d1u8za_ 6 KVIMVGSGGVGKSALTLQFMY 26 (168)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 589999999999999999875
No 154
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.63 E-value=0.028 Score=48.39 Aligned_cols=53 Identities=23% Similarity=0.253 Sum_probs=31.3
Q ss_pred CcccccCcHHHHHHHHHHhhcccCChhHHhhcCC---CCCCeEEEEcCCCChHHHHHHHH
Q 014743 159 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGI---AQPKGVLLYGPPGTGKTLLARAV 215 (419)
Q Consensus 159 ~~~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi---~~p~~iLL~GPpGtGKT~Lakal 215 (419)
+|++++=.++.++.|.+. .+.+|-......+ -.++.+++.+|+|+|||+ +-.+
T Consensus 2 sF~~l~L~~~l~~~L~~~---g~~~pt~iQ~~aip~il~g~dvi~~a~tGsGKTl-ay~l 57 (206)
T d1s2ma1 2 TFEDFYLKRELLMGIFEA---GFEKPSPIQEEAIPVAITGRDILARAKNGTGKTA-AFVI 57 (206)
T ss_dssp CGGGGCCCHHHHHHHHHT---TCCSCCHHHHHHHHHHHHTCCEEEECCTTSCHHH-HHHH
T ss_pred ChHHcCCCHHHHHHHHHC---CCCCCCHHHHHHHHHHHcCCCEEEecCCcchhhh-hhcc
Confidence 577876666677777663 1222211111111 125679999999999994 4444
No 155
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=95.58 E-value=0.0057 Score=56.89 Aligned_cols=40 Identities=15% Similarity=0.165 Sum_probs=30.4
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhccC-----CceEEEeCcchh
Q 014743 193 AQPKGVLLYGPPGTGKTLLARAVAHHTD-----CTFIRVSGSELV 232 (419)
Q Consensus 193 ~~p~~iLL~GPpGtGKT~LakalA~~~~-----~~~i~v~~s~l~ 232 (419)
+.|--|.+.||+|+||||+|+.|+..+. ..+..+.+.+|.
T Consensus 78 k~P~iIGIaG~sgSGKSTla~~L~~lL~~~~~~~~v~~Is~D~F~ 122 (308)
T d1sq5a_ 78 RIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGFL 122 (308)
T ss_dssp CCCEEEEEEECTTSSHHHHHHHHHHHHTTSTTCCCEEEEEGGGGB
T ss_pred CCCEEEEEeCCCCCCCcHHHHHHHHHHhhhcCCCceEEEeeeeeE
Confidence 4455688999999999999999998653 345666666663
No 156
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=95.55 E-value=0.004 Score=53.18 Aligned_cols=25 Identities=36% Similarity=0.428 Sum_probs=22.2
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhc
Q 014743 194 QPKGVLLYGPPGTGKTLLARAVAHH 218 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~LakalA~~ 218 (419)
.+.++||.||+|+|||++|-.+...
T Consensus 14 ~g~gvli~G~sG~GKS~lal~l~~~ 38 (177)
T d1knxa2 14 FGVGVLLTGRSGIGKSECALDLINK 38 (177)
T ss_dssp TTEEEEEEESSSSSHHHHHHHHHTT
T ss_pred CCEEEEEEcCCCCCHHHHHHHHHHc
Confidence 4688999999999999999988764
No 157
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=95.53 E-value=0.056 Score=45.62 Aligned_cols=32 Identities=28% Similarity=0.408 Sum_probs=21.8
Q ss_pred eEEEEcCCCChHHHHHHHHHh----ccCCceEEEeC
Q 014743 197 GVLLYGPPGTGKTLLARAVAH----HTDCTFIRVSG 228 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~----~~~~~~i~v~~ 228 (419)
..|+.+|+|+|||.++-.++. ..+...+.+.+
T Consensus 25 n~lv~~pTGsGKT~i~~~~~~~~~~~~~~~il~i~P 60 (200)
T d1wp9a1 25 NCLIVLPTGLGKTLIAMMIAEYRLTKYGGKVLMLAP 60 (200)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHHHHHSCSCEEEECS
T ss_pred CeEEEeCCCCcHHHHHHHHHHHHHHhcCCcEEEEcC
Confidence 478999999999986665553 22444555544
No 158
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.51 E-value=0.0069 Score=49.96 Aligned_cols=21 Identities=24% Similarity=0.404 Sum_probs=19.2
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.+++.|++|||||+|++.+..
T Consensus 4 Kv~liG~~~vGKTsLl~~~~~ 24 (165)
T d1z06a1 4 KIIVIGDSNVGKTCLTYRFCA 24 (165)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 378999999999999999985
No 159
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.48 E-value=0.0069 Score=50.62 Aligned_cols=21 Identities=24% Similarity=0.423 Sum_probs=19.1
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.+++.|+||||||+|++.+.+
T Consensus 5 KivvvG~~~vGKTsli~r~~~ 25 (173)
T d2a5ja1 5 KYIIIGDTGVGKSCLLLQFTD 25 (173)
T ss_dssp EEEEESSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHhc
Confidence 378999999999999999885
No 160
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.47 E-value=0.015 Score=48.41 Aligned_cols=21 Identities=24% Similarity=0.401 Sum_probs=19.2
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.++|.|.+|||||+|++.+.+
T Consensus 6 Ki~lvG~~~vGKTsll~~~~~ 26 (169)
T d1x1ra1 6 KLVVVGDGGVGKSALTIQFFQ 26 (169)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 478999999999999999986
No 161
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.42 E-value=0.015 Score=48.26 Aligned_cols=21 Identities=24% Similarity=0.412 Sum_probs=19.3
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.++|.|.+|||||+|++.+..
T Consensus 7 Ki~lvG~~~vGKTsLi~r~~~ 27 (171)
T d2erya1 7 RLVVVGGGGVGKSALTIQFIQ 27 (171)
T ss_dssp EEEEEECTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 489999999999999999876
No 162
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.42 E-value=0.0041 Score=50.40 Aligned_cols=22 Identities=27% Similarity=0.425 Sum_probs=20.0
Q ss_pred eEEEEcCCCChHHHHHHHHHhc
Q 014743 197 GVLLYGPPGTGKTLLARAVAHH 218 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~~ 218 (419)
.++|.|+||||||+|+..+.+.
T Consensus 2 KI~liG~~nvGKSSLln~l~~~ 23 (166)
T d2qtvb1 2 KLLFLGLDNAGKTTLLHMLKND 23 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhCC
Confidence 4899999999999999999863
No 163
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=95.41 E-value=0.017 Score=54.71 Aligned_cols=18 Identities=33% Similarity=0.586 Sum_probs=15.1
Q ss_pred CCeEEEEcCCCChHHHHH
Q 014743 195 PKGVLLYGPPGTGKTLLA 212 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~La 212 (419)
...++-||++|+|||+..
T Consensus 125 n~ti~aYGqtGSGKT~Tm 142 (368)
T d2ncda_ 125 NICIFAYGQTGSGKTYTM 142 (368)
T ss_dssp EEEEEEECSTTSSHHHHH
T ss_pred ceeEEeeccCCCccceEe
Confidence 456888999999999875
No 164
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=95.33 E-value=0.0047 Score=51.33 Aligned_cols=24 Identities=21% Similarity=0.350 Sum_probs=21.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHh
Q 014743 194 QPKGVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~LakalA~ 217 (419)
....++|.|+||||||+|..++..
T Consensus 12 k~~kI~lvG~~~vGKTsLl~~l~~ 35 (186)
T d1f6ba_ 12 KTGKLVFLGLDNAGKTTLLHMLKD 35 (186)
T ss_dssp CCEEEEEEEETTSSHHHHHHHHSC
T ss_pred CCCEEEEECCCCCCHHHHHHHHhC
Confidence 345699999999999999999976
No 165
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=95.31 E-value=0.0058 Score=51.76 Aligned_cols=25 Identities=32% Similarity=0.425 Sum_probs=22.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhc
Q 014743 194 QPKGVLLYGPPGTGKTLLARAVAHH 218 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~LakalA~~ 218 (419)
.+.++||.||+|+|||+++-.+...
T Consensus 14 ~g~gvli~G~sg~GKS~la~~l~~~ 38 (169)
T d1ko7a2 14 YGVGVLITGDSGIGKSETALELIKR 38 (169)
T ss_dssp TTEEEEEEESTTSSHHHHHHHHHHT
T ss_pred CCEEEEEEeCCCCCHHHHHHHHHHc
Confidence 4679999999999999999888764
No 166
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=95.28 E-value=0.0036 Score=54.86 Aligned_cols=22 Identities=32% Similarity=0.508 Sum_probs=19.7
Q ss_pred EEEEcCCCChHHHHHHHHHhcc
Q 014743 198 VLLYGPPGTGKTLLARAVAHHT 219 (419)
Q Consensus 198 iLL~GPpGtGKT~LakalA~~~ 219 (419)
+++.||+|+|||||++.|.+.+
T Consensus 3 i~v~G~~GsGKTTLl~~ll~~~ 24 (244)
T d1yrba1 3 VVFVGTAGSGKTTLTGEFGRYL 24 (244)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEcCCCCcHHHHHHHHHHHH
Confidence 6889999999999999998654
No 167
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.27 E-value=0.02 Score=47.19 Aligned_cols=21 Identities=24% Similarity=0.480 Sum_probs=19.2
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.+++.|.+|||||+|++.+..
T Consensus 5 KivvvG~~~vGKTsli~r~~~ 25 (167)
T d1c1ya_ 5 KLVVLGSGGVGKSALTVQFVQ 25 (167)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHc
Confidence 379999999999999999986
No 168
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=95.20 E-value=0.0044 Score=51.25 Aligned_cols=22 Identities=23% Similarity=0.394 Sum_probs=20.1
Q ss_pred eEEEEcCCCChHHHHHHHHHhc
Q 014743 197 GVLLYGPPGTGKTLLARAVAHH 218 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~~ 218 (419)
.++|.|++|||||+|++.+.+.
T Consensus 4 ki~ivG~~~~GKTsLi~~l~~~ 25 (165)
T d1ksha_ 4 RLLMLGLDNAGKTTILKKFNGE 25 (165)
T ss_dssp EEEEECSTTSSHHHHHHHHTTC
T ss_pred EEEEECCCCCCHHHHHHHHcCC
Confidence 5899999999999999999873
No 169
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=95.19 E-value=0.006 Score=49.77 Aligned_cols=23 Identities=26% Similarity=0.388 Sum_probs=20.4
Q ss_pred CeEEEEcCCCChHHHHHHHHHhc
Q 014743 196 KGVLLYGPPGTGKTLLARAVAHH 218 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~LakalA~~ 218 (419)
-.++|.|+||||||+|.+++...
T Consensus 6 ~kI~ivG~~~vGKSSLi~~~~~~ 28 (169)
T d1upta_ 6 MRILILGLDGAGKTTILYRLQVG 28 (169)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHS
T ss_pred eEEEEECCCCCCHHHHHHHHhCC
Confidence 45899999999999999999863
No 170
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.11 E-value=0.02 Score=47.16 Aligned_cols=21 Identities=24% Similarity=0.428 Sum_probs=19.1
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.++|.|.+|+|||+|++.+.+
T Consensus 6 KivlvG~~~vGKTsli~~~~~ 26 (166)
T d1z0fa1 6 KYIIIGDMGVGKSCLLHQFTE 26 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 378999999999999999985
No 171
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=95.08 E-value=0.013 Score=48.75 Aligned_cols=24 Identities=21% Similarity=0.322 Sum_probs=21.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHh
Q 014743 194 QPKGVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~LakalA~ 217 (419)
..-.+++.|+||+|||+|++.+..
T Consensus 11 k~~kIvlvG~~~vGKTSli~rl~~ 34 (173)
T d1e0sa_ 11 KEMRILMLGLDAAGKTTILYKLKL 34 (173)
T ss_dssp CCEEEEEEEETTSSHHHHHHHTTC
T ss_pred CeEEEEEECCCCCCHHHHHHHHhc
Confidence 345699999999999999999985
No 172
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=95.08 E-value=0.0054 Score=53.13 Aligned_cols=34 Identities=24% Similarity=0.356 Sum_probs=25.4
Q ss_pred EEEEcCCCChHHHHHHHHHhccCCceEEEeCcchhhh
Q 014743 198 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK 234 (419)
Q Consensus 198 iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~~~ 234 (419)
|.++|++||||||+++.+. +.|.+++ ++.++...
T Consensus 5 IgITG~igSGKStv~~~l~-~~G~~vi--daD~i~~~ 38 (205)
T d1jjva_ 5 VGLTGGIGSGKTTIANLFT-DLGVPLV--DADVVARE 38 (205)
T ss_dssp EEEECSTTSCHHHHHHHHH-TTTCCEE--EHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHH-HCCCeEE--EchHHHHH
Confidence 5689999999999999886 5676655 45454443
No 173
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=95.07 E-value=0.047 Score=48.33 Aligned_cols=55 Identities=20% Similarity=0.132 Sum_probs=39.1
Q ss_pred cCcHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhc---cCCceEEEeCcch
Q 014743 164 GGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH---TDCTFIRVSGSEL 231 (419)
Q Consensus 164 ~G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~---~~~~~i~v~~s~l 231 (419)
..|..++++|.+.+.. +.|...||+|.+|+|||.++-..+.. .+...+.+.+...
T Consensus 58 ~~Q~~~~~~i~~~~~~-------------~~~~~~LL~GdvGsGKT~V~~~a~~~~~~~g~qv~~l~Pt~~ 115 (233)
T d2eyqa3 58 PDQAQAINAVLSDMCQ-------------PLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTL 115 (233)
T ss_dssp HHHHHHHHHHHHHHHS-------------SSCCEEEEECCCCTTTHHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred hhHHHHHHHHHHHHhc-------------cCccCeEEEcCCCCCcHHHHHHHHHHHHHcCCceEEEccHHH
Confidence 3467777777777765 46788999999999999987666543 2555666655443
No 174
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.97 E-value=0.0074 Score=53.09 Aligned_cols=29 Identities=14% Similarity=0.229 Sum_probs=25.4
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhccCCce
Q 014743 195 PKGVLLYGPPGTGKTLLARAVAHHTDCTF 223 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~LakalA~~~~~~~ 223 (419)
|+-|.|-|+-||||||+++.|+..+....
T Consensus 2 pk~IviEG~~GsGKST~~~~L~~~l~~~~ 30 (241)
T d2ocpa1 2 PRRLSIEGNIAVGKSTFVKLLTKTYPEWH 30 (241)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHCTTSE
T ss_pred CeEEEEECCCCCcHHHHHHHHHHHHhhcC
Confidence 67889999999999999999999875543
No 175
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=94.86 E-value=0.0069 Score=52.39 Aligned_cols=25 Identities=28% Similarity=0.368 Sum_probs=22.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhcc
Q 014743 195 PKGVLLYGPPGTGKTLLARAVAHHT 219 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~LakalA~~~ 219 (419)
++-|.|.|+.||||||+++.|++.+
T Consensus 2 gkfIviEG~dGsGKsT~~~~L~~~L 26 (210)
T d4tmka_ 2 SKYIVIEGLEGAGKTTARNVVVETL 26 (210)
T ss_dssp CCEEEEEECTTSCHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHH
Confidence 4567889999999999999999866
No 176
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.79 E-value=0.026 Score=46.81 Aligned_cols=21 Identities=33% Similarity=0.507 Sum_probs=19.1
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.++|.|.+|||||+|++.+..
T Consensus 7 KI~lvG~~~vGKTsll~~~~~ 27 (174)
T d2bmea1 7 KFLVIGNAGTGKSCLLHQFIE 27 (174)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 389999999999999999875
No 177
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=94.75 E-value=0.054 Score=44.58 Aligned_cols=24 Identities=17% Similarity=0.223 Sum_probs=20.8
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHh
Q 014743 194 QPKGVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~LakalA~ 217 (419)
....|.|.|+|++|||+|.++|.+
T Consensus 15 ~~~~I~lvG~~NvGKSSL~n~L~~ 38 (188)
T d1puia_ 15 TGIEVAFAGRSNAGKSSALNTLTN 38 (188)
T ss_dssp CSEEEEEEECTTSSHHHHHTTTCC
T ss_pred cCCEEEEECCCCCCHHHHHHHHhC
Confidence 345699999999999999999965
No 178
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=94.71 E-value=0.013 Score=50.68 Aligned_cols=35 Identities=26% Similarity=0.359 Sum_probs=25.7
Q ss_pred EEEEcCCCChHHHHHHHHHhccCCceEEEeCcchhhhh
Q 014743 198 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKY 235 (419)
Q Consensus 198 iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~~~~ 235 (419)
|.|+|++||||||+++.+. ..|.+ .+++..+....
T Consensus 6 IgitG~igSGKStv~~~l~-~~G~~--vidaD~i~~~l 40 (208)
T d1vhta_ 6 VALTGGIGSGKSTVANAFA-DLGIN--VIDADIIARQV 40 (208)
T ss_dssp EEEECCTTSCHHHHHHHHH-HTTCE--EEEHHHHHHHT
T ss_pred EEEECCCcCCHHHHHHHHH-HCCCc--EEEchHHHHHH
Confidence 5689999999999999886 45554 45555555443
No 179
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=94.68 E-value=0.05 Score=49.05 Aligned_cols=54 Identities=20% Similarity=0.274 Sum_probs=38.1
Q ss_pred CcHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhc---cCCceEEEeCcch
Q 014743 165 GLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH---TDCTFIRVSGSEL 231 (419)
Q Consensus 165 G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~---~~~~~i~v~~s~l 231 (419)
.|..++++|.+.+.. ..|...||+|..|||||.++-..+.. .+...+.+-+.+.
T Consensus 87 ~Q~~ai~ei~~d~~~-------------~~~m~rLL~GdvGSGKT~Va~~a~~~~~~~g~q~~~m~Pt~~ 143 (264)
T d1gm5a3 87 AQKRAHQEIRNDMIS-------------EKPMNRLLQGDVGSGKTVVAQLAILDNYEAGFQTAFMVPTSI 143 (264)
T ss_dssp HHHHHHHHHHHHHHS-------------SSCCCCEEECCSSSSHHHHHHHHHHHHHHHTSCEEEECSCHH
T ss_pred hHHHHHHHHHHHhhc-------------cCcceeeeeccccccccHHHHHHHHHHHhcccceeEEeehHh
Confidence 366777777776654 46778899999999999988766643 2555566555544
No 180
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=94.67 E-value=0.0069 Score=50.70 Aligned_cols=21 Identities=19% Similarity=0.365 Sum_probs=19.5
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.|+|.|+||+|||||..+|.+
T Consensus 2 ~I~lvG~~nvGKSsLin~l~~ 22 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLTG 22 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHHS
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 589999999999999999986
No 181
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=94.65 E-value=0.0061 Score=55.29 Aligned_cols=18 Identities=28% Similarity=0.401 Sum_probs=14.8
Q ss_pred CCeEEEEcCCCChHHHHH
Q 014743 195 PKGVLLYGPPGTGKTLLA 212 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~La 212 (419)
...+|+.||||||||+++
T Consensus 14 ~~~~lI~g~aGTGKTt~l 31 (306)
T d1uaaa1 14 TGPCLVLAGAGSGKTRVI 31 (306)
T ss_dssp SSEEEECCCTTSCHHHHH
T ss_pred CCCEEEEeeCCccHHHHH
Confidence 345899999999999753
No 182
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.59 E-value=0.016 Score=50.56 Aligned_cols=33 Identities=21% Similarity=0.138 Sum_probs=27.3
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhccCCceEEEe
Q 014743 195 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVS 227 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~ 227 (419)
++-|.|.|+-||||||+++.|+..+......+.
T Consensus 3 Gk~I~iEG~DGsGKST~~~~L~~~L~~~~~~~~ 35 (214)
T d1tmka_ 3 GKLILIEGLDRTGKTTQCNILYKKLQPNCKLLK 35 (214)
T ss_dssp CCEEEEEESTTSSHHHHHHHHHHHTTTSEEEEE
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHhCCEEEE
Confidence 556788999999999999999998876655544
No 183
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=94.49 E-value=0.1 Score=44.78 Aligned_cols=57 Identities=14% Similarity=0.193 Sum_probs=30.8
Q ss_pred CcccccCcHHHHHHHHHH-hhcccCCh-hHHhhcCCCCCCeEEEEcCCCChHHHHHHHHH
Q 014743 159 TYDMIGGLDQQIKEIKEV-IELPIKHP-ELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216 (419)
Q Consensus 159 ~~~~I~G~~~~~~~l~~~-i~~~l~~~-~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA 216 (419)
+|++++=.++.++.|.+. +..|..-+ ..+.. -+.....+++..|+|+|||+..-..+
T Consensus 5 sf~~l~l~~~l~~~l~~~g~~~pt~iQ~~~ip~-~l~g~~d~iv~a~TGsGKT~~~~l~~ 63 (208)
T d1hv8a1 5 NFNELNLSDNILNAIRNKGFEKPTDIQMKVIPL-FLNDEYNIVAQARTGSGKTASFAIPL 63 (208)
T ss_dssp CGGGSSCCHHHHHHHHHHTCCSCCHHHHHHHHH-HHHTCSEEEEECCSSSSHHHHHHHHH
T ss_pred CHHHcCCCHHHHHHHHHCCCCCCCHHHHHHHHH-HHcCCCCeeeechhcccccceeeccc
Confidence 577775555566666542 21121111 01100 11223579999999999998665443
No 184
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=94.47 E-value=0.0093 Score=49.58 Aligned_cols=21 Identities=29% Similarity=0.374 Sum_probs=19.2
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.++|.|++|||||+|++.+.+
T Consensus 7 Ki~vvG~~~vGKTsLi~~l~~ 27 (169)
T d3raba_ 7 KILIIGNSSVGKTSFLFRYAD 27 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHc
Confidence 379999999999999999985
No 185
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=94.41 E-value=0.066 Score=48.87 Aligned_cols=28 Identities=32% Similarity=0.566 Sum_probs=24.3
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHHhcc
Q 014743 192 IAQPKGVLLYGPPGTGKTLLARAVAHHT 219 (419)
Q Consensus 192 i~~p~~iLL~GPpGtGKT~LakalA~~~ 219 (419)
+..+..+++.||+|||||+|+..+++..
T Consensus 40 igrGQr~~I~g~~g~GKT~l~~~i~~~~ 67 (289)
T d1xpua3 40 IGRGQRGLIVAPPKAGKTMLLQNIAQSI 67 (289)
T ss_dssp CBTTCEEEEEECSSSSHHHHHHHHHHHH
T ss_pred ccCCCeeeEeCCCCCCHHHHHHHHHHHH
Confidence 4567889999999999999999998743
No 186
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.35 E-value=0.0098 Score=49.48 Aligned_cols=21 Identities=38% Similarity=0.645 Sum_probs=19.4
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.++|.|++|||||+|++.+.+
T Consensus 7 Ki~lvG~~~vGKTsLi~~l~~ 27 (171)
T d2ew1a1 7 KIVLIGNAGVGKTCLVRRFTQ 27 (171)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 479999999999999999986
No 187
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=94.35 E-value=0.01 Score=54.51 Aligned_cols=36 Identities=11% Similarity=0.264 Sum_probs=26.2
Q ss_pred eEEEEcCCCChHHHHHHHHHhcc---CCceEEEeCcchh
Q 014743 197 GVLLYGPPGTGKTLLARAVAHHT---DCTFIRVSGSELV 232 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~~~---~~~~i~v~~s~l~ 232 (419)
-|.+.|++|+||||++++|++.+ +.....+.+.+|.
T Consensus 6 IIgIaG~SGSGKTTva~~l~~i~~~~~v~~~iI~~Dsfy 44 (288)
T d1a7ja_ 6 IISVTGSSGAGTSTVKHTFDQIFRREGVKAVSIEGDAFH 44 (288)
T ss_dssp EEEEESCC---CCTHHHHHHHHHHHHTCCEEEEEGGGGB
T ss_pred EEEEECCCCCcHHHHHHHHHHHHhhcCCCeEEEeCCCCC
Confidence 58899999999999999998865 4566667777663
No 188
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=94.32 E-value=0.016 Score=49.48 Aligned_cols=31 Identities=16% Similarity=0.221 Sum_probs=24.6
Q ss_pred EEEEcCCCChHHHHHHHHHhcc---CCceEEEeC
Q 014743 198 VLLYGPPGTGKTLLARAVAHHT---DCTFIRVSG 228 (419)
Q Consensus 198 iLL~GPpGtGKT~LakalA~~~---~~~~i~v~~ 228 (419)
|.|.|+.||||||+++.|++.+ +.+++.+..
T Consensus 3 I~ieG~dGsGKST~~~~L~~~l~~~g~~v~~~~~ 36 (208)
T d1gsia_ 3 IAIEGVDGAGKRTLVEKLSGAFRAAGRSVATLAF 36 (208)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEES
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEec
Confidence 6788999999999999999866 455555543
No 189
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=94.27 E-value=0.01 Score=50.39 Aligned_cols=21 Identities=19% Similarity=0.373 Sum_probs=19.6
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.|.|.|+||+|||||.++|.+
T Consensus 25 ~I~lvG~~n~GKSTLin~L~g 45 (195)
T d1svia_ 25 EIALAGRSNVGKSSFINSLIN 45 (195)
T ss_dssp EEEEEEBTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHhcC
Confidence 599999999999999999985
No 190
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=94.26 E-value=0.0086 Score=54.82 Aligned_cols=18 Identities=28% Similarity=0.431 Sum_probs=14.8
Q ss_pred CCeEEEEcCCCChHHHHH
Q 014743 195 PKGVLLYGPPGTGKTLLA 212 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~La 212 (419)
+..+++.||||||||+++
T Consensus 24 ~g~~lV~g~aGSGKTt~l 41 (318)
T d1pjra1 24 EGPLLIMAGAGSGKTRVL 41 (318)
T ss_dssp SSCEEEEECTTSCHHHHH
T ss_pred CCCEEEEecCCccHHHHH
Confidence 345899999999999754
No 191
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.22 E-value=0.011 Score=49.33 Aligned_cols=21 Identities=33% Similarity=0.507 Sum_probs=19.1
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.+++.|++|||||+|++.+.+
T Consensus 6 Ki~vvG~~~vGKTsLi~~~~~ 26 (175)
T d2f9la1 6 KVVLIGDSGVGKSNLLSRFTR 26 (175)
T ss_dssp EEEEESSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 489999999999999999875
No 192
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.20 E-value=0.09 Score=45.16 Aligned_cols=50 Identities=18% Similarity=0.205 Sum_probs=29.2
Q ss_pred CCcccccCcHHHHHHHHHHhhcccCChhHHhhcCC---CCCCeEEEEcCCCChHHH
Q 014743 158 STYDMIGGLDQQIKEIKEVIELPIKHPELFESLGI---AQPKGVLLYGPPGTGKTL 210 (419)
Q Consensus 158 ~~~~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi---~~p~~iLL~GPpGtGKT~ 210 (419)
.+|++++=.++.++.|.+. .+.+|.......+ -.++.+++..|+|||||+
T Consensus 3 ~~F~~l~L~~~l~~~l~~~---g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKTl 55 (206)
T d1veca_ 3 NEFEDYCLKRELLMGIFEM---GWEKPSPIQEESIPIALSGRDILARAKNGTGKSG 55 (206)
T ss_dssp SSGGGSCCCHHHHHHHHTT---TCCSCCHHHHHHHHHHHTTCCEEEECCSSSTTHH
T ss_pred CChhccCcCHHHHHHHHHC---CCCCCCHHHHHHHHHHHcCCCEEeeccCcccccc
Confidence 3577776555556666543 1222222221111 235789999999999995
No 193
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=94.19 E-value=0.011 Score=53.44 Aligned_cols=21 Identities=33% Similarity=0.444 Sum_probs=18.7
Q ss_pred CeEEEEcCCCChHHHHHHHHH
Q 014743 196 KGVLLYGPPGTGKTLLARAVA 216 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~LakalA 216 (419)
+..+|+||+|+|||++..||.
T Consensus 24 ~~~vi~G~NgsGKTtileAI~ 44 (369)
T g1ii8.1 24 GINLIIGQNGSGKSSLLDAIL 44 (369)
T ss_dssp EEEEEECCTTSSHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHH
Confidence 356899999999999999996
No 194
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.11 E-value=0.013 Score=48.74 Aligned_cols=21 Identities=24% Similarity=0.480 Sum_probs=19.2
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.++|.|++|||||+|++.+..
T Consensus 4 Ki~lvG~~~vGKTsli~r~~~ 24 (168)
T d2atva1 4 KLAIFGRAGVGKSALVVRFLT 24 (168)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 378999999999999999986
No 195
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.11 E-value=0.013 Score=48.78 Aligned_cols=21 Identities=33% Similarity=0.548 Sum_probs=19.0
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.+++.|++|||||+|++.+.+
T Consensus 4 Ki~~vG~~~vGKSsLi~~~~~ 24 (175)
T d1ky3a_ 4 KVIILGDSGVGKTSLMHRYVN 24 (175)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHc
Confidence 378999999999999999875
No 196
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.04 E-value=0.013 Score=48.61 Aligned_cols=21 Identities=29% Similarity=0.498 Sum_probs=19.0
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.+++.|.+|||||+|++.+..
T Consensus 4 Ki~viG~~~vGKTsLi~r~~~ 24 (171)
T d2erxa1 4 RVAVFGAGGVGKSSLVLRFVK 24 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 378999999999999999886
No 197
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=94.02 E-value=0.046 Score=49.11 Aligned_cols=18 Identities=28% Similarity=0.388 Sum_probs=15.9
Q ss_pred CCCCeEEEEcCCCChHHH
Q 014743 193 AQPKGVLLYGPPGTGKTL 210 (419)
Q Consensus 193 ~~p~~iLL~GPpGtGKT~ 210 (419)
..++.+++.+|+|+|||+
T Consensus 7 ~~~~~~lv~~~TGsGKT~ 24 (305)
T d2bmfa2 7 RKKRLTIMDLHPGAGKTK 24 (305)
T ss_dssp STTCEEEECCCTTSSTTT
T ss_pred hcCCcEEEEECCCCCHHH
Confidence 467889999999999995
No 198
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=94.00 E-value=0.015 Score=51.43 Aligned_cols=26 Identities=27% Similarity=0.270 Sum_probs=22.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhccC
Q 014743 195 PKGVLLYGPPGTGKTLLARAVAHHTD 220 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~LakalA~~~~ 220 (419)
++..+|.|+||+|||||+.+|.....
T Consensus 95 ~kt~~~~G~SGVGKSTLiN~L~~~~~ 120 (225)
T d1u0la2 95 GKISTMAGLSGVGKSSLLNAINPGLK 120 (225)
T ss_dssp SSEEEEECSTTSSHHHHHHHHSTTCC
T ss_pred CCeEEEECCCCCCHHHHHHhhcchhh
Confidence 46789999999999999999986543
No 199
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=94.00 E-value=0.014 Score=48.99 Aligned_cols=27 Identities=26% Similarity=0.405 Sum_probs=22.5
Q ss_pred CCCCCCeEEEEcCCCChHHHHHHHHHh
Q 014743 191 GIAQPKGVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 191 gi~~p~~iLL~GPpGtGKT~LakalA~ 217 (419)
+-..--.++|.|++|+|||+|++.+..
T Consensus 13 ~~~k~~KI~lvG~~~vGKTsLi~~l~~ 39 (182)
T d1moza_ 13 GSNKELRILILGLDGAGKTTILYRLQI 39 (182)
T ss_dssp TCSSCEEEEEEEETTSSHHHHHHHTCC
T ss_pred CCCceEEEEEECCCCCCHHHHHHHHhc
Confidence 334556799999999999999999864
No 200
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.98 E-value=0.0093 Score=52.12 Aligned_cols=26 Identities=15% Similarity=0.241 Sum_probs=22.9
Q ss_pred CeEEEEcCCCChHHHHHHHHHhccCC
Q 014743 196 KGVLLYGPPGTGKTLLARAVAHHTDC 221 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~LakalA~~~~~ 221 (419)
+-|.|-||-||||||+++.|++.+..
T Consensus 3 k~I~ieG~dGsGKST~~~~L~~~l~~ 28 (241)
T d1p5zb_ 3 KKISIEGNIAAGKSTFVNILKQLCED 28 (241)
T ss_dssp EEEEEECSTTSSHHHHHTTTGGGCTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhc
Confidence 45789999999999999999998743
No 201
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.94 E-value=0.014 Score=48.42 Aligned_cols=21 Identities=24% Similarity=0.395 Sum_probs=19.2
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.+++.|.+|||||+|++.+.+
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~~ 28 (170)
T d1r2qa_ 8 KLVLLGESAVGKSSLVLRFVK 28 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 479999999999999999985
No 202
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.93 E-value=0.013 Score=48.27 Aligned_cols=20 Identities=35% Similarity=0.566 Sum_probs=18.8
Q ss_pred EEEEcCCCChHHHHHHHHHh
Q 014743 198 VLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 198 iLL~GPpGtGKT~LakalA~ 217 (419)
+++.|++|+|||+|++.+..
T Consensus 5 i~vvG~~~vGKTSli~~l~~ 24 (166)
T d1g16a_ 5 ILLIGDSGVGKSCLLVRFVE 24 (166)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999999986
No 203
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.88 E-value=0.015 Score=48.13 Aligned_cols=21 Identities=33% Similarity=0.349 Sum_probs=19.1
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.++|.|.+|||||+|++.+..
T Consensus 5 KivlvG~~~vGKTsLi~r~~~ 25 (167)
T d1z08a1 5 KVVLLGEGCVGKTSLVLRYCE 25 (167)
T ss_dssp EEEEECCTTSCHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 479999999999999999885
No 204
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.87 E-value=0.014 Score=48.20 Aligned_cols=22 Identities=18% Similarity=0.321 Sum_probs=19.8
Q ss_pred CeEEEEcCCCChHHHHHHHHHh
Q 014743 196 KGVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~LakalA~ 217 (419)
..|+|.|++|||||+|++.+..
T Consensus 5 ~Kv~liG~~~vGKTsLl~~~~~ 26 (167)
T d1xtqa1 5 RKIAILGYRSVGKSSLTIQFVE 26 (167)
T ss_dssp EEEEEEESTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCcCHHHHHHHHHh
Confidence 4589999999999999999885
No 205
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=93.74 E-value=0.016 Score=48.70 Aligned_cols=21 Identities=33% Similarity=0.550 Sum_probs=19.1
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.+++.|.+|||||+|+..+.+
T Consensus 4 Kv~vvG~~~vGKSSLi~~l~~ 24 (184)
T d1vg8a_ 4 KVIILGDSGVGKTSLMNQYVN 24 (184)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 378999999999999999986
No 206
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=93.68 E-value=0.022 Score=49.67 Aligned_cols=22 Identities=23% Similarity=0.450 Sum_probs=19.5
Q ss_pred CeEEEEcCCCChHHHHHHHHHh
Q 014743 196 KGVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~LakalA~ 217 (419)
..+||.|++|+|||+|++.+..
T Consensus 7 ~KilllG~~~vGKTsll~~~~~ 28 (221)
T d1azta2 7 HRLLLLGAGESGKSTIVKQMRI 28 (221)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHhc
Confidence 3589999999999999999864
No 207
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=93.66 E-value=0.013 Score=51.44 Aligned_cols=32 Identities=16% Similarity=0.158 Sum_probs=25.4
Q ss_pred eEEEEcCCCChHHHHHHHHHhccCCceEEEeCcc
Q 014743 197 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSE 230 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~ 230 (419)
-|.|+|+.||||||+|+.|+...+ +..+++++
T Consensus 3 iIgiTG~igSGKsTva~~l~e~~g--~~~i~~aD 34 (241)
T d1deka_ 3 LIFLSGVKRSGKDTTADFIMSNYS--AVKYQLAG 34 (241)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHSC--EEECCTTH
T ss_pred EEEEECCCCCCHHHHHHHHHHhCC--CeEEcccH
Confidence 367999999999999999998764 45666443
No 208
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.61 E-value=0.017 Score=48.24 Aligned_cols=21 Identities=29% Similarity=0.501 Sum_probs=19.5
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.+++.|++|||||+|++.+.+
T Consensus 9 Ki~vvG~~~vGKTsli~~l~~ 29 (177)
T d1x3sa1 9 KILIIGESGVGKSSLLLRFTD 29 (177)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 589999999999999999985
No 209
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.59 E-value=0.017 Score=47.78 Aligned_cols=21 Identities=38% Similarity=0.509 Sum_probs=19.1
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.+++.|++|||||+|++.+.+
T Consensus 8 Ki~vvG~~~vGKTsli~~~~~ 28 (170)
T d2g6ba1 8 KVMLVGDSGVGKTCLLVRFKD 28 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 389999999999999999876
No 210
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.56 E-value=0.017 Score=47.42 Aligned_cols=21 Identities=24% Similarity=0.328 Sum_probs=19.1
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.|++.|.+|||||+|++.+.+
T Consensus 2 Kv~vvG~~~vGKTsLi~r~~~ 22 (164)
T d1yzqa1 2 KLVFLGEQSVGKTSLITRFMY 22 (164)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 378999999999999999985
No 211
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=93.52 E-value=0.017 Score=47.84 Aligned_cols=21 Identities=24% Similarity=0.382 Sum_probs=19.2
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.|+|.|.||+|||+|.++|.+
T Consensus 7 ~I~iiG~~nvGKSSLin~L~~ 27 (179)
T d1egaa1 7 FIAIVGRPNVGKSTLLNKLLG 27 (179)
T ss_dssp EEEEECSSSSSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 378999999999999999985
No 212
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.50 E-value=0.018 Score=48.12 Aligned_cols=22 Identities=23% Similarity=0.300 Sum_probs=19.6
Q ss_pred eEEEEcCCCChHHHHHHHHHhc
Q 014743 197 GVLLYGPPGTGKTLLARAVAHH 218 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~~ 218 (419)
.+++.|++|||||+|+..+...
T Consensus 4 KivvvG~~~vGKTsLi~~~~~~ 25 (177)
T d1kmqa_ 4 KLVIVGDGACGKTCLLIVNSKD 25 (177)
T ss_dssp EEEEEESTTSSHHHHHHHHHHS
T ss_pred EEEEECCCCcCHHHHHHHHHhC
Confidence 4789999999999999999863
No 213
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.48 E-value=0.019 Score=47.74 Aligned_cols=21 Identities=33% Similarity=0.491 Sum_probs=19.1
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.++|.|++|||||+|+..+..
T Consensus 8 KI~vvG~~~vGKSSli~~~~~ 28 (174)
T d1wmsa_ 8 KVILLGDGGVGKSSLMNRYVT 28 (174)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 489999999999999998875
No 214
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=93.47 E-value=0.0052 Score=51.41 Aligned_cols=23 Identities=26% Similarity=0.239 Sum_probs=19.9
Q ss_pred eEEEEcCCCChHHHHHHHHHhcc
Q 014743 197 GVLLYGPPGTGKTLLARAVAHHT 219 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~~~ 219 (419)
-.+|+||+|+|||+++.||.--+
T Consensus 26 ~tvi~G~NGsGKStil~Ai~~~L 48 (222)
T d1qhla_ 26 VTTLSGGNGAGKSTTMAAFVTAL 48 (222)
T ss_dssp HHHHHSCCSHHHHHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHh
Confidence 45789999999999999998654
No 215
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=93.44 E-value=0.017 Score=52.93 Aligned_cols=24 Identities=21% Similarity=0.286 Sum_probs=20.2
Q ss_pred CeEEEEcCCCChHHHHHHHHHhcc
Q 014743 196 KGVLLYGPPGTGKTLLARAVAHHT 219 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~LakalA~~~ 219 (419)
.-.+|+||+|||||++..||+-.+
T Consensus 27 ~lnvi~G~NGsGKS~il~AI~~~L 50 (329)
T g1xew.1 27 GFTAIVGANGSGKSNIGDAILFVL 50 (329)
T ss_dssp SEEEEEECTTSSSHHHHHHHHHHT
T ss_pred CeEEEECCCCCCHHHHHHHHHHHH
Confidence 345899999999999999997543
No 216
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=93.35 E-value=0.023 Score=47.46 Aligned_cols=24 Identities=29% Similarity=0.461 Sum_probs=20.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHh
Q 014743 194 QPKGVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~LakalA~ 217 (419)
.+-.|.|.|.+|+|||+|+.+|.+
T Consensus 7 ~~~kV~iiG~~~~GKSTLin~l~~ 30 (186)
T d1mkya2 7 DAIKVAIVGRPNVGKSTLFNAILN 30 (186)
T ss_dssp SCEEEEEECSTTSSHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCHHHHHHHHHC
Confidence 345689999999999999999985
No 217
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=93.34 E-value=0.02 Score=54.73 Aligned_cols=34 Identities=32% Similarity=0.527 Sum_probs=25.7
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhcc---CCceEEEeC
Q 014743 195 PKGVLLYGPPGTGKTLLARAVAHHT---DCTFIRVSG 228 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~LakalA~~~---~~~~i~v~~ 228 (419)
.+|+++.|+||+|||++++.+..++ +.+++.+|.
T Consensus 50 ~~H~~I~G~tGsGKT~~l~~li~~~~~~g~~~iiiD~ 86 (433)
T d1e9ra_ 50 PRHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDP 86 (433)
T ss_dssp GGCEEEEECTTSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cceEEEEeCCCCcHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 4789999999999999988776532 455555554
No 218
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.33 E-value=0.021 Score=47.13 Aligned_cols=21 Identities=29% Similarity=0.431 Sum_probs=19.2
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.++|.|.+|||||+|++.+..
T Consensus 6 Ki~lvG~~~vGKTsli~rl~~ 26 (167)
T d1z0ja1 6 KVCLLGDTGVGKSSIMWRFVE 26 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 478999999999999999985
No 219
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.22 E-value=0.02 Score=48.62 Aligned_cols=20 Identities=35% Similarity=0.554 Sum_probs=18.7
Q ss_pred EEEEcCCCChHHHHHHHHHh
Q 014743 198 VLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 198 iLL~GPpGtGKT~LakalA~ 217 (419)
+++.|++|||||+|++.+.+
T Consensus 9 ivvvG~~~vGKTsli~~l~~ 28 (194)
T d2bcgy1 9 LLLIGNSGVGKSCLLLRFSD 28 (194)
T ss_dssp EEEEESTTSSHHHHHHHHHH
T ss_pred EEEECCCCcCHHHHHHHHhh
Confidence 78999999999999999885
No 220
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal domain {Methanococcus maripaludis [TaxId: 39152]}
Probab=93.21 E-value=0.1 Score=43.37 Aligned_cols=21 Identities=24% Similarity=0.479 Sum_probs=19.3
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.|-+.|.|++|||||.++|.+
T Consensus 7 nIaiiG~~naGKSTL~n~L~~ 27 (179)
T d1wb1a4 7 NLGIFGHIDHGKTTLSKVLTE 27 (179)
T ss_dssp EEEEEECTTSSHHHHHHHHHT
T ss_pred EEEEEeCCCCcHHHHHHHHHH
Confidence 478999999999999999985
No 221
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=93.11 E-value=0.013 Score=49.23 Aligned_cols=21 Identities=38% Similarity=0.474 Sum_probs=18.9
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.|.|.|+||+|||+|..+|.+
T Consensus 3 ~VaiiG~~nvGKSSLin~L~~ 23 (185)
T d1lnza2 3 DVGLVGFPSVGKSTLLSVVSS 23 (185)
T ss_dssp CEEEESSTTSSHHHHHHHSEE
T ss_pred eEEEECCCCCCHHHHHHHHhC
Confidence 378999999999999999965
No 222
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.04 E-value=0.024 Score=46.82 Aligned_cols=21 Identities=19% Similarity=0.362 Sum_probs=19.0
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.++|.|.+|||||+|++.+..
T Consensus 5 Ki~vvG~~~vGKTsLi~~~~~ 25 (170)
T d1ek0a_ 5 KLVLLGEAAVGKSSIVLRFVS 25 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 478999999999999998875
No 223
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.04 E-value=0.021 Score=47.89 Aligned_cols=21 Identities=24% Similarity=0.282 Sum_probs=19.4
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.+++.|.+|||||+|++.+..
T Consensus 7 KivviG~~~vGKTsli~~~~~ 27 (183)
T d1mh1a_ 7 KCVVVGDGAVGKTCLLISYTT 27 (183)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 589999999999999999886
No 224
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.04 E-value=0.024 Score=47.20 Aligned_cols=20 Identities=45% Similarity=0.634 Sum_probs=18.6
Q ss_pred EEEEcCCCChHHHHHHHHHh
Q 014743 198 VLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 198 iLL~GPpGtGKT~LakalA~ 217 (419)
++|.|.+|||||+|++.+..
T Consensus 6 v~lvG~~~vGKTsLi~~~~~ 25 (172)
T d2g3ya1 6 VVLIGEQGVGKSTLANIFAG 25 (172)
T ss_dssp EEEECCTTSSHHHHHHHHHC
T ss_pred EEEECCCCcCHHHHHHHHHh
Confidence 78999999999999999975
No 225
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.87 E-value=0.016 Score=48.28 Aligned_cols=21 Identities=33% Similarity=0.479 Sum_probs=8.9
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.|+|.|.+|||||+|++.+.+
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~~ 28 (173)
T d2fu5c1 8 KLLLIGDSGVGKTCVLFRFSE 28 (173)
T ss_dssp EEEEECCCCC-----------
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 378999999999999998875
No 226
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.81 E-value=0.015 Score=48.47 Aligned_cols=21 Identities=33% Similarity=0.485 Sum_probs=18.2
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.+++.|++|||||+|+..+.+
T Consensus 5 Ki~vvG~~~vGKTsli~~~~~ 25 (170)
T d1i2ma_ 5 KLVLVGDGGTGKTTFVKRHLT 25 (170)
T ss_dssp EEEEEECTTSSHHHHHHTTC-
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 378999999999999998875
No 227
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.81 E-value=0.026 Score=47.39 Aligned_cols=21 Identities=29% Similarity=0.430 Sum_probs=19.2
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.++|.|.+|||||+|++.+..
T Consensus 4 KivliG~~~vGKTsli~r~~~ 24 (179)
T d1m7ba_ 4 KIVVVGDSQCGKTALLHVFAK 24 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 479999999999999999886
No 228
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=92.71 E-value=0.32 Score=43.79 Aligned_cols=26 Identities=31% Similarity=0.498 Sum_probs=22.9
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhc
Q 014743 193 AQPKGVLLYGPPGTGKTLLARAVAHH 218 (419)
Q Consensus 193 ~~p~~iLL~GPpGtGKT~LakalA~~ 218 (419)
..+..+++.|++|||||+|+..++..
T Consensus 66 gkGQr~~If~~~g~GKt~l~~~i~~~ 91 (276)
T d2jdid3 66 AKGGKIGLFGGAGVGKTVLIMELINN 91 (276)
T ss_dssp ETTCEEEEEECTTSSHHHHHHHHHHH
T ss_pred cCCCEEEeeCCCCCCHHHHHHHHHHH
Confidence 45678999999999999999999865
No 229
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.63 E-value=0.028 Score=47.27 Aligned_cols=21 Identities=29% Similarity=0.346 Sum_probs=19.1
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.++|.|.+|||||+|++.+..
T Consensus 11 Ki~lvG~~~vGKTsLi~r~~~ 31 (185)
T d2atxa1 11 KCVVVGDGAVGKTCLLMSYAN 31 (185)
T ss_dssp EEEEEECTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhh
Confidence 388999999999999999885
No 230
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga maritima [TaxId: 2336]}
Probab=92.59 E-value=0.0098 Score=48.55 Aligned_cols=21 Identities=24% Similarity=0.515 Sum_probs=19.3
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.+.|.|.||+|||+|+++|.+
T Consensus 2 kI~liG~~n~GKSSLin~l~g 22 (160)
T d1xzpa2 2 RMVIVGKPNVGKSTLLNRLLN 22 (160)
T ss_dssp EEEEECCHHHHTCHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 478999999999999999986
No 231
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=92.58 E-value=0.016 Score=51.47 Aligned_cols=26 Identities=31% Similarity=0.463 Sum_probs=21.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhcc
Q 014743 194 QPKGVLLYGPPGTGKTLLARAVAHHT 219 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~LakalA~~~ 219 (419)
.++..+|.|+||+|||||+.+|....
T Consensus 96 ~~~~~vl~G~SGVGKSSLiN~L~~~~ 121 (231)
T d1t9ha2 96 QDKTTVFAGQSGVGKSSLLNAISPEL 121 (231)
T ss_dssp TTSEEEEEESHHHHHHHHHHHHCC--
T ss_pred ccceEEEECCCCccHHHHHHhhccHh
Confidence 35667899999999999999998644
No 232
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=92.57 E-value=0.017 Score=48.23 Aligned_cols=20 Identities=40% Similarity=0.511 Sum_probs=18.6
Q ss_pred EEEEcCCCChHHHHHHHHHh
Q 014743 198 VLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 198 iLL~GPpGtGKT~LakalA~ 217 (419)
|.|.|.||+|||||+++|.+
T Consensus 4 VaivG~~nvGKSTLin~L~~ 23 (180)
T d1udxa2 4 VGLVGYPNAGKSSLLAAMTR 23 (180)
T ss_dssp EEEECCGGGCHHHHHHHHCS
T ss_pred EEEECCCCCCHHHHHHHHhC
Confidence 78999999999999999975
No 233
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.47 E-value=0.03 Score=47.33 Aligned_cols=21 Identities=24% Similarity=0.282 Sum_probs=18.9
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.++|.|++|||||+|+..+..
T Consensus 5 KvvllG~~~vGKTSli~r~~~ 25 (191)
T d2ngra_ 5 KCVVVGDGAVGKTCLLISYTT 25 (191)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 478999999999999998875
No 234
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.24 E-value=0.036 Score=52.16 Aligned_cols=25 Identities=24% Similarity=0.484 Sum_probs=20.6
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHh
Q 014743 193 AQPKGVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 193 ~~p~~iLL~GPpGtGKT~LakalA~ 217 (419)
.+++-.+|+||+|+|||++..||+-
T Consensus 23 ~~~~l~~i~G~NGsGKS~ileAi~~ 47 (427)
T d1w1wa_ 23 GESNFTSIIGPNGSGKSNMMDAISF 47 (427)
T ss_dssp TTCSEEEEECSTTSSHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHH
Confidence 3345568999999999999999964
No 235
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=91.98 E-value=0.16 Score=45.38 Aligned_cols=58 Identities=17% Similarity=0.306 Sum_probs=41.6
Q ss_pred hhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCeEEEEEeCCcchhhHHhcCCCceeEEEEcC
Q 014743 252 EHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFP 331 (419)
Q Consensus 252 ~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~~ld~allr~gRfd~~I~~~ 331 (419)
...++|++|||.+. +.|+..++.+.++|..+. ...+ -||+|||++..++ .+|.++.+.
T Consensus 300 ~~~~~illiDEpe~-----------~Lh~~~~~~l~~~l~~~~---~~~~-QviitTHs~~~~~-------~~d~~~~v~ 357 (369)
T g1ii8.1 300 AGEISLLILDEPTP-----------YLDEERRRKLITIMERYL---KKIP-QVILVSHDEELKD-------AADHVIRIS 357 (369)
T ss_dssp HSSCSEEEEECCSS-----------SSCSHHHHHHHHHHHHTG---GGSS-EEEEEESCGGGGG-------TSSEEEEEE
T ss_pred CCCCCEEEEECCCC-----------CCCHHHHHHHHHHHHHHH---hcCC-EEEEEechHHHHH-------hCCEEEEEE
Confidence 45678999999555 588999999999998863 2223 5788999987554 345555543
No 236
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=91.92 E-value=0.037 Score=46.56 Aligned_cols=20 Identities=25% Similarity=0.506 Sum_probs=18.2
Q ss_pred eEEEEcCCCChHHHHHHHHH
Q 014743 197 GVLLYGPPGTGKTLLARAVA 216 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA 216 (419)
.++|.|.+|+|||+|++.+.
T Consensus 4 KivllG~~~vGKTsll~r~~ 23 (200)
T d1zcba2 4 KILLLGAGESGKSTFLKQMR 23 (200)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHh
Confidence 47999999999999999993
No 237
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=91.87 E-value=0.076 Score=47.44 Aligned_cols=36 Identities=28% Similarity=0.296 Sum_probs=28.3
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhcc---CCceEEEeC
Q 014743 193 AQPKGVLLYGPPGTGKTLLARAVAHHT---DCTFIRVSG 228 (419)
Q Consensus 193 ~~p~~iLL~GPpGtGKT~LakalA~~~---~~~~i~v~~ 228 (419)
+.|+-+++.|.-|+||||++-++|..+ +..+.-|++
T Consensus 6 ~~p~~i~~sGKGGVGKTTvaa~lA~~lA~~G~rVLlvD~ 44 (296)
T d1ihua1 6 NIPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVST 44 (296)
T ss_dssp SCCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCeEEEEECCCcChHHHHHHHHHHHHHHCCCCEEEEeC
Confidence 468889999999999999988888754 555555554
No 238
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=91.77 E-value=0.035 Score=50.22 Aligned_cols=23 Identities=26% Similarity=0.488 Sum_probs=19.6
Q ss_pred CeEEEEcCCCChHHHHHHHHHhc
Q 014743 196 KGVLLYGPPGTGKTLLARAVAHH 218 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~LakalA~~ 218 (419)
+-.+|+||+|||||++..||+-.
T Consensus 25 ~lnvlvG~NgsGKS~iL~Ai~~~ 47 (308)
T d1e69a_ 25 RVTAIVGPNGSGKSNIIDAIKWV 47 (308)
T ss_dssp SEEEEECCTTTCSTHHHHHHHHT
T ss_pred CeEEEECCCCCcHHHHHHHHHHH
Confidence 34689999999999999999653
No 239
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=91.45 E-value=0.18 Score=45.51 Aligned_cols=24 Identities=13% Similarity=0.126 Sum_probs=21.1
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHh
Q 014743 194 QPKGVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~LakalA~ 217 (419)
.-++|-+.|..|+|||||+.+|..
T Consensus 5 ~iRni~i~gh~~~GKTtL~e~ll~ 28 (276)
T d2bv3a2 5 RLRNIGIAAHIDAGKTTTTERILY 28 (276)
T ss_dssp GEEEEEEEECTTSCHHHHHHHHHH
T ss_pred hceEEEEEeCCCCCHHHHHHHHHH
Confidence 346799999999999999999964
No 240
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.97 E-value=0.061 Score=44.91 Aligned_cols=22 Identities=18% Similarity=0.211 Sum_probs=19.9
Q ss_pred CeEEEEcCCCChHHHHHHHHHh
Q 014743 196 KGVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~LakalA~ 217 (419)
-.+++.|++|+|||+|+..+.+
T Consensus 6 ~ki~vlG~~~vGKTsLi~~~~~ 27 (175)
T d2bmja1 6 LRLGVLGDARSGKSSLIHRFLT 27 (175)
T ss_dssp EEEEEECCTTTTHHHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHh
Confidence 4589999999999999998876
No 241
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=90.58 E-value=0.29 Score=43.71 Aligned_cols=48 Identities=17% Similarity=0.252 Sum_probs=38.4
Q ss_pred hhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCeEEEEEeCCcchhh
Q 014743 252 EHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILD 315 (419)
Q Consensus 252 ~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~~ld 315 (419)
...+++++|||+|. +.|+..++.+..+|.++. .++=||+|||+|..++
T Consensus 239 ~~~~~~~~iDEpe~-----------~Lhp~~~~~l~~~l~~~~-----~~~QviitTHsp~~~~ 286 (308)
T d1e69a_ 239 IKPSPFYVLDEVDS-----------PLDDYNAERFKRLLKENS-----KHTQFIVITHNKIVME 286 (308)
T ss_dssp TSCCSEEEEESCCS-----------SCCHHHHHHHHHHHHHHT-----TTSEEEEECCCTTGGG
T ss_pred hccCchhhhhhccc-----------cCCHHHHHHHHHHHHHhc-----cCCEEEEEECCHHHHH
Confidence 45678999999776 478999999999988762 3466899999988775
No 242
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=90.47 E-value=0.065 Score=44.69 Aligned_cols=21 Identities=24% Similarity=0.430 Sum_probs=19.1
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.+++.|.+|+|||+|++.+..
T Consensus 4 Kiv~lG~~~vGKTsll~r~~~ 24 (200)
T d2bcjq2 4 KLLLLGTGESGKSTFIKQMRI 24 (200)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 479999999999999999975
No 243
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=89.57 E-value=0.1 Score=48.56 Aligned_cols=25 Identities=28% Similarity=0.367 Sum_probs=22.2
Q ss_pred CeEEEEcCCCChHHHHHHHHHhccC
Q 014743 196 KGVLLYGPPGTGKTLLARAVAHHTD 220 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~LakalA~~~~ 220 (419)
..|.|-|+-|+||||+++.|++.++
T Consensus 7 ~rI~iEG~iGsGKSTl~~~L~~~l~ 31 (333)
T d1p6xa_ 7 VRIYLDGVYGIGKSTTGRVMASAAS 31 (333)
T ss_dssp EEEEEECSTTSSHHHHHHHHHSGGG
T ss_pred EEEEEECCccCCHHHHHHHHHHHhc
Confidence 4577889999999999999999874
No 244
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=89.14 E-value=0.18 Score=40.71 Aligned_cols=31 Identities=26% Similarity=0.387 Sum_probs=21.8
Q ss_pred EEEEcCCCChHHH-HHHHHHh--ccCCceEEEeC
Q 014743 198 VLLYGPPGTGKTL-LARAVAH--HTDCTFIRVSG 228 (419)
Q Consensus 198 iLL~GPpGtGKT~-LakalA~--~~~~~~i~v~~ 228 (419)
-+++||-.+|||+ |.+.+-+ ..+..++.++.
T Consensus 5 ~~i~GpMfsGKTteLi~~~~~~~~~~~kv~~ikp 38 (139)
T d2b8ta1 5 EFITGPMFAGKTAELIRRLHRLEYADVKYLVFKP 38 (139)
T ss_dssp EEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred EEEEccccCHHHHHHHHHHHHHHHCCCcEEEEEE
Confidence 3789999999999 7777643 34556555544
No 245
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=88.80 E-value=0.16 Score=42.79 Aligned_cols=32 Identities=19% Similarity=0.202 Sum_probs=24.7
Q ss_pred CeEEEEcC-CCChHHHHHHHHHhcc---CCceEEEe
Q 014743 196 KGVLLYGP-PGTGKTLLARAVAHHT---DCTFIRVS 227 (419)
Q Consensus 196 ~~iLL~GP-pGtGKT~LakalA~~~---~~~~i~v~ 227 (419)
+.++++|- +|+|||+++-.||..+ +..+..++
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id 37 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK 37 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence 56889999 5999999988888754 55566665
No 246
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=88.58 E-value=0.14 Score=44.49 Aligned_cols=23 Identities=39% Similarity=0.460 Sum_probs=20.2
Q ss_pred eEEEEcCCCChHHHHHHHHHhcc
Q 014743 197 GVLLYGPPGTGKTLLARAVAHHT 219 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~~~ 219 (419)
-+++.|.-|+|||||++.+....
T Consensus 5 v~iitGFLGaGKTTll~~lL~~~ 27 (222)
T d1nija1 5 VTLLTGFLGAGKTTLLRHILNEQ 27 (222)
T ss_dssp EEEEEESSSSSCHHHHHHHHHSC
T ss_pred EEEEeeCCCCCHHHHHHHHHhcC
Confidence 47899999999999999998753
No 247
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus thermophilus [TaxId: 274]}
Probab=88.42 E-value=0.1 Score=48.11 Aligned_cols=19 Identities=37% Similarity=0.602 Sum_probs=16.1
Q ss_pred CCeEEEEcCCCChHHHHHH
Q 014743 195 PKGVLLYGPPGTGKTLLAR 213 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~Lak 213 (419)
+...||+|.+|||||||..
T Consensus 14 ~~valffGLSGTGKTTLs~ 32 (318)
T d1j3ba1 14 GDVAVFFGLSGTGKTTLST 32 (318)
T ss_dssp CCEEEEEECTTSCHHHHTC
T ss_pred CCEEEEEccCCCCcccccc
Confidence 4568999999999999764
No 248
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=88.29 E-value=0.11 Score=42.90 Aligned_cols=21 Identities=24% Similarity=0.463 Sum_probs=18.8
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
.++|.|..|+|||+|++.+..
T Consensus 4 KivllG~~~vGKTsl~~r~~~ 24 (195)
T d1svsa1 4 KLLLLGAGESGKSTIVKQMKI 24 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhh
Confidence 479999999999999998864
No 249
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=87.89 E-value=0.15 Score=48.42 Aligned_cols=24 Identities=21% Similarity=0.337 Sum_probs=21.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHh
Q 014743 194 QPKGVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~LakalA~ 217 (419)
.|-.|.+.|.||+|||+|+.+|.+
T Consensus 55 ~~l~Iai~G~~n~GKSSLiNaL~G 78 (400)
T d1tq4a_ 55 SVLNVAVTGETGSGKSSFINTLRG 78 (400)
T ss_dssp CCEEEEEEECTTSSHHHHHHHHHT
T ss_pred CCcEEEEECCCCCCHHHHHHHHhC
Confidence 467899999999999999999975
No 250
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=87.26 E-value=0.32 Score=45.17 Aligned_cols=50 Identities=8% Similarity=0.246 Sum_probs=36.6
Q ss_pred hhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCeEEEEEeCCcchhhH
Q 014743 252 EHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQ 316 (419)
Q Consensus 252 ~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~~ld~ 316 (419)
..++.+++|||+|. +.|+.....+.++|..+. ..+.=+|++||.|..++.
T Consensus 352 ~~~~pililDE~d~-----------~Ld~~~~~~~~~~l~~~~----~~~~Q~I~iTH~~~~~~~ 401 (427)
T d1w1wa_ 352 YQPSPFFVLDEVDA-----------ALDITNVQRIAAYIRRHR----NPDLQFIVISLKNTMFEK 401 (427)
T ss_dssp SSCCSEEEESSTTT-----------TCCHHHHHHHHHHHHHHC----BTTBEEEEECSCHHHHTT
T ss_pred CCCCCEEEEeCCCC-----------CCCHHHHHHHHHHHHHHh----CCCCEEEEEeCCHHHHHh
Confidence 34455999999777 477888888888887762 234568999998876554
No 251
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=86.97 E-value=0.57 Score=44.54 Aligned_cols=57 Identities=23% Similarity=0.314 Sum_probs=46.1
Q ss_pred cccccCcHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcc
Q 014743 160 YDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSE 230 (419)
Q Consensus 160 ~~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~ 230 (419)
|.-=|-|.+++++|.+.|.. ..+..+|.|.+|+|||.++-+++...+.+++.|..+.
T Consensus 10 ~~p~gDQP~aI~~l~~~l~~--------------g~~~q~l~GltGS~ka~~iA~l~~~~~rp~LVVt~n~ 66 (413)
T d1t5la1 10 YEPQGDQPQAIAKLVDGLRR--------------GVKHQTLLGATGTGKTFTISNVIAQVNKPTLVIAHNK 66 (413)
T ss_dssp SCCCTTHHHHHHHHHHHHHH--------------TCSEEEEEECTTSCHHHHHHHHHHHHTCCEEEECSSH
T ss_pred CCCCCCCHHHHHHHHHHHhc--------------CCCcEEEeCCCCcHHHHHHHHHHHHhCCCEEEEeCCH
Confidence 34447788889999988754 2356789999999999999999999999988887653
No 252
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Escherichia coli [TaxId: 562]}
Probab=86.92 E-value=0.15 Score=46.72 Aligned_cols=19 Identities=37% Similarity=0.632 Sum_probs=16.1
Q ss_pred CCCeEEEEcCCCChHHHHH
Q 014743 194 QPKGVLLYGPPGTGKTLLA 212 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~La 212 (419)
.+...||+|.+|||||||.
T Consensus 13 ~~~~alfFGLSGTGKTTLs 31 (313)
T d2olra1 13 KGDVAVFFGLSGTGKTTLS 31 (313)
T ss_dssp TSCEEEEECSTTSSHHHHH
T ss_pred CCCEEEEEccCCCCcccce
Confidence 3456799999999999977
No 253
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-lyase) {Trypanosoma cruzi [TaxId: 5693]}
Probab=86.30 E-value=0.18 Score=46.47 Aligned_cols=19 Identities=42% Similarity=0.651 Sum_probs=16.3
Q ss_pred CCCeEEEEcCCCChHHHHH
Q 014743 194 QPKGVLLYGPPGTGKTLLA 212 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~La 212 (419)
.+...||+|.+|||||||.
T Consensus 13 ~gd~alfFGLSGTGKTTLs 31 (323)
T d1ii2a1 13 QGDVTVFFGLSGTGKTTLS 31 (323)
T ss_dssp TCCEEEEECCTTSSHHHHH
T ss_pred CCCEEEEEccCCCCcccce
Confidence 3456799999999999998
No 254
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=85.69 E-value=0.16 Score=47.11 Aligned_cols=25 Identities=36% Similarity=0.441 Sum_probs=21.7
Q ss_pred eEEEEcCCCChHHHHHHHHHhccCC
Q 014743 197 GVLLYGPPGTGKTLLARAVAHHTDC 221 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~~~~~ 221 (419)
.|.|-|+-|+||||+++.|++.+..
T Consensus 7 rI~IEG~iGsGKSTl~~~L~~~l~~ 31 (331)
T d1osna_ 7 RIYLDGAYGIGKTTAAEEFLHHFAI 31 (331)
T ss_dssp EEEEEESSSSCTTHHHHHHHHTTTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhh
Confidence 3678899999999999999998743
No 255
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=85.53 E-value=0.16 Score=47.03 Aligned_cols=25 Identities=28% Similarity=0.381 Sum_probs=19.1
Q ss_pred eEEEEcCCCChHHHHHHHHHhccCC
Q 014743 197 GVLLYGPPGTGKTLLARAVAHHTDC 221 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~~~~~ 221 (419)
.|.|-|+-|+||||+++.|++.+..
T Consensus 6 rI~IEG~iGsGKTTl~~~La~~l~~ 30 (329)
T d1e2ka_ 6 RVYIDGPHGMGKTTTTQLLVALGSR 30 (329)
T ss_dssp EEEECSCTTSSHHHHHHHHTC----
T ss_pred EEEEECCcCCCHHHHHHHHHHHhCC
Confidence 3667899999999999999987743
No 256
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=85.11 E-value=0.62 Score=40.90 Aligned_cols=35 Identities=26% Similarity=0.309 Sum_probs=25.2
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhcc---CCceEEEeCc
Q 014743 195 PKGVLLYGPPGTGKTLLARAVAHHT---DCTFIRVSGS 229 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~LakalA~~~---~~~~i~v~~s 229 (419)
.+-++++|.=|+||||++-.||..+ +..++.|++.
T Consensus 20 ~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~D 57 (279)
T d1ihua2 20 HGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSD 57 (279)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 3446678999999999877777543 5566666654
No 257
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=84.94 E-value=0.29 Score=42.01 Aligned_cols=52 Identities=19% Similarity=0.217 Sum_probs=31.9
Q ss_pred CCCcccccCcHHHHHHHHHHhhcccCChhHHhhcCC---CCCCeEEEEcCCCChHHHH
Q 014743 157 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGI---AQPKGVLLYGPPGTGKTLL 211 (419)
Q Consensus 157 ~~~~~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi---~~p~~iLL~GPpGtGKT~L 211 (419)
-.+|++++=.++.++.|.+. .+.+|.-.....+ -.++.+++..|+|||||+.
T Consensus 9 ~~sF~~l~l~~~l~~~L~~~---g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKT~a 63 (212)
T d1qdea_ 9 VYKFDDMELDENLLRGVFGY---GFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGT 63 (212)
T ss_dssp CCCGGGGTCCHHHHHHHHHH---TCCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHHH
T ss_pred ccChhhCCCCHHHHHHHHHC---CCCCCCHHHHHHHHHHHcCCCEEeecccccchhhh
Confidence 35788886566666666542 2223222222111 2467899999999999974
No 258
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR {Bacillus stearothermophilus [TaxId: 1422]}
Probab=84.22 E-value=0.2 Score=42.58 Aligned_cols=49 Identities=20% Similarity=0.177 Sum_probs=28.2
Q ss_pred CcccccCcHHHHHHHHHHhhcccCChhHHhhcCC---CCCCeEEEEcCCCChHHH
Q 014743 159 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGI---AQPKGVLLYGPPGTGKTL 210 (419)
Q Consensus 159 ~~~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi---~~p~~iLL~GPpGtGKT~ 210 (419)
+|++++=.+..++.|.+. .+.+|-...+.-+ -.++.+++..|+|||||+
T Consensus 2 ~F~~l~L~~~l~~~l~~~---g~~~pt~iQ~~aip~~l~G~dvii~a~TGSGKTl 53 (209)
T d1q0ua_ 2 QFTRFPFQPFIIEAIKTL---RFYKPTEIQERIIPGALRGESMVGQSQTGTGKTH 53 (209)
T ss_dssp CGGGSCCCHHHHHHHHHT---TCCSCCHHHHHHHHHHHHTCCEEEECCSSHHHHH
T ss_pred ccccCCcCHHHHHHHHHC---CCCCCCHHHHHHHHHHHCCCCeEeecccccccce
Confidence 466776555666666542 2222221111111 125789999999999997
No 259
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.03 E-value=0.27 Score=42.02 Aligned_cols=50 Identities=20% Similarity=0.210 Sum_probs=30.0
Q ss_pred CcccccCcHHHHHHHHHHhhcccCChhHHhhcCC---CCCCeEEEEcCCCChHHHH
Q 014743 159 TYDMIGGLDQQIKEIKEVIELPIKHPELFESLGI---AQPKGVLLYGPPGTGKTLL 211 (419)
Q Consensus 159 ~~~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi---~~p~~iLL~GPpGtGKT~L 211 (419)
.|++++=.++..+.|.+. .+.+|-......+ -.++.+++..|+|||||+.
T Consensus 2 ~F~dl~L~~~l~~~l~~~---g~~~pt~iQ~~aip~il~g~dvl~~A~TGsGKTla 54 (207)
T d1t6na_ 2 GFRDFLLKPELLRAIVDC---GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAV 54 (207)
T ss_dssp CSTTSCCCHHHHHHHHHT---TCCCCCHHHHHHHHHHHTTCCEEEECCTTSCHHHH
T ss_pred CccccCcCHHHHHHHHHC---CCCCCCHHHHHHHHHHHcCCCeEEEeccccccccc
Confidence 467776566666666542 2233322222111 2357899999999999853
No 260
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.00 E-value=0.3 Score=42.10 Aligned_cols=52 Identities=19% Similarity=0.275 Sum_probs=31.5
Q ss_pred CCcccccCcHHHHHHHHHHhhcccCChhHHhhcCC---CCCCeEEEEcCCCChHHHHH
Q 014743 158 STYDMIGGLDQQIKEIKEVIELPIKHPELFESLGI---AQPKGVLLYGPPGTGKTLLA 212 (419)
Q Consensus 158 ~~~~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi---~~p~~iLL~GPpGtGKT~La 212 (419)
.+|++++=.+..++.|.+. .+.+|....+..+ -.++.+++..|+|||||+..
T Consensus 12 ~sF~~l~L~~~l~~~L~~~---g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKTlay 66 (218)
T d2g9na1 12 DSFDDMNLSESLLRGIYAY---GFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATF 66 (218)
T ss_dssp CCGGGSCCCHHHHHHHHHH---TCCSCCHHHHHHHHHHHHTCCEEEECCTTSSHHHHH
T ss_pred CCHHHCCCCHHHHHHHHHC---CCCCCCHHHHHHHHHHHcCCCEEEEcccchhhhhhh
Confidence 4788886566666666542 2333322222211 13578999999999999743
No 261
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=82.66 E-value=0.33 Score=43.47 Aligned_cols=22 Identities=41% Similarity=0.567 Sum_probs=19.6
Q ss_pred CeEEEEcCCCChHHHHHHHHHh
Q 014743 196 KGVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~LakalA~ 217 (419)
++|.+.|+.|+|||||+.+|..
T Consensus 3 RNv~iiGh~~~GKTtL~e~ll~ 24 (267)
T d2dy1a2 3 RTVALVGHAGSGKTTLTEALLY 24 (267)
T ss_dssp EEEEEEESTTSSHHHHHHHHHH
T ss_pred eEEEEEcCCCCcHHHHHHHHHH
Confidence 4688999999999999999953
No 262
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=81.48 E-value=1.2 Score=42.18 Aligned_cols=53 Identities=23% Similarity=0.270 Sum_probs=42.1
Q ss_pred cCcHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcc
Q 014743 164 GGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSE 230 (419)
Q Consensus 164 ~G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~ 230 (419)
|-+.+++++|.+.+.. ..+..+|.|.+|+|||.++-+++...+.+++.|..+.
T Consensus 11 ~dqp~aI~~l~~~L~~--------------g~~~~~L~GlsgS~ka~~~A~l~~~~~rp~LvVt~~~ 63 (408)
T d1c4oa1 11 GDQPKAIAGLVEALRD--------------GERFVTLLGATGTGKTVTMAKVIEALGRPALVLAPNK 63 (408)
T ss_dssp TTHHHHHHHHHHHHHT--------------TCSEEEEEECTTSCHHHHHHHHHHHHTCCEEEEESSH
T ss_pred CCCHHHHHHHHHHHhc--------------CCCcEEEecCCCCHHHHHHHHHHHHhCCCEEEEeCCH
Confidence 4566778888887753 2345789999999999999999999999988776553
No 263
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=80.73 E-value=0.57 Score=41.04 Aligned_cols=33 Identities=24% Similarity=0.363 Sum_probs=26.0
Q ss_pred eEEEEcCCCChHHHHHHHHHhcc---CCceEEEeCc
Q 014743 197 GVLLYGPPGTGKTLLARAVAHHT---DCTFIRVSGS 229 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~~~---~~~~i~v~~s 229 (419)
.|.++|.=||||||++-.||..+ +..+.-||+.
T Consensus 3 ~Iai~gKGGvGKTT~a~nLA~~LA~~G~rVllID~D 38 (269)
T d1cp2a_ 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred EEEEECCCcCCHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 46689999999999998888654 6667777764
No 264
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.58 E-value=0.56 Score=40.53 Aligned_cols=50 Identities=24% Similarity=0.409 Sum_probs=31.2
Q ss_pred CCcccccCcHHHHHHHHHHhhcccCChhHHhhcC---CCCCCeEEEEcCCCChHHH
Q 014743 158 STYDMIGGLDQQIKEIKEVIELPIKHPELFESLG---IAQPKGVLLYGPPGTGKTL 210 (419)
Q Consensus 158 ~~~~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~g---i~~p~~iLL~GPpGtGKT~ 210 (419)
.+|++++=.++.++.|.+. .+..|-...... +-.++.++...|+|||||.
T Consensus 17 ~sF~~l~L~~~l~~~L~~~---g~~~pt~IQ~~aIp~il~g~dvi~~a~TGSGKTl 69 (222)
T d2j0sa1 17 PTFDTMGLREDLLRGIYAY---GFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTA 69 (222)
T ss_dssp CSGGGGCCCHHHHHHHHHH---TCCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHH
T ss_pred CCHHHCCCCHHHHHHHHHC---CCCCCCHHHHHHHHHHHCCCCeEEEcCcchhhhh
Confidence 4788987666677777653 122222111111 1235789999999999995
No 265
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Probab=80.05 E-value=0.41 Score=44.41 Aligned_cols=18 Identities=33% Similarity=0.591 Sum_probs=15.1
Q ss_pred CCeEEEEcCCCChHHHHH
Q 014743 195 PKGVLLYGPPGTGKTLLA 212 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~La 212 (419)
...++-||++|+|||+++
T Consensus 80 n~ti~aYG~tgSGKT~Tm 97 (354)
T d1goja_ 80 NGTVFAYGQTGAGKSYTM 97 (354)
T ss_dssp CEEEEEECSTTSSHHHHH
T ss_pred ceeEEecccCCCCcceee
Confidence 456888999999999875
No 266
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=79.23 E-value=0.36 Score=44.16 Aligned_cols=19 Identities=26% Similarity=0.417 Sum_probs=16.0
Q ss_pred CCCeEEEEcCCCChHHHHH
Q 014743 194 QPKGVLLYGPPGTGKTLLA 212 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~La 212 (419)
....++-||++|+|||+..
T Consensus 75 ~n~~i~aYGqtgSGKTyT~ 93 (323)
T d1bg2a_ 75 YNGTIFAYGQTSSGKTHTM 93 (323)
T ss_dssp CCEEEEEECSTTSSHHHHH
T ss_pred CCcceeeecccCCCCceec
Confidence 3457888999999999886
No 267
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b, N-terminal (G) domain {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=78.93 E-value=0.47 Score=40.87 Aligned_cols=21 Identities=29% Similarity=0.322 Sum_probs=19.1
Q ss_pred EEEEcCCCChHHHHHHHHHhc
Q 014743 198 VLLYGPPGTGKTLLARAVAHH 218 (419)
Q Consensus 198 iLL~GPpGtGKT~LakalA~~ 218 (419)
|-+.|.|++|||||+.+|...
T Consensus 8 IaIiGh~d~GKSTL~~~L~~~ 28 (227)
T d1g7sa4 8 VSVLGHVDHGKTTLLDHIRGS 28 (227)
T ss_dssp EEEECSTTSSHHHHHHHHHHH
T ss_pred EEEEeCCCccHHHHHHHHHhh
Confidence 888999999999999999764
No 268
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=78.60 E-value=0.38 Score=47.22 Aligned_cols=17 Identities=29% Similarity=0.466 Sum_probs=14.5
Q ss_pred CeEEEEcCCCChHHHHH
Q 014743 196 KGVLLYGPPGTGKTLLA 212 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~La 212 (419)
..+|+.|.||||||+.+
T Consensus 25 ~~~lV~A~AGSGKT~~l 41 (623)
T g1qhh.1 25 GPLLIMAGAGSGKTRVL 41 (623)
T ss_dssp SCEEEEECTTSCHHHHH
T ss_pred CCEEEEEeCchHHHHHH
Confidence 45888899999998866
No 269
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=78.53 E-value=0.96 Score=42.00 Aligned_cols=18 Identities=33% Similarity=0.628 Sum_probs=15.2
Q ss_pred CCeEEEEcCCCChHHHHH
Q 014743 195 PKGVLLYGPPGTGKTLLA 212 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~La 212 (419)
...++-||++|+|||+..
T Consensus 75 n~~i~aYGqTGSGKTyTm 92 (364)
T d1sdma_ 75 NVCIFAYGQTGSGKTFTI 92 (364)
T ss_dssp EEEEEEECSTTSSHHHHH
T ss_pred ceeeeccccCCCCccccc
Confidence 456788999999999985
No 270
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=78.11 E-value=0.46 Score=40.42 Aligned_cols=24 Identities=29% Similarity=0.217 Sum_probs=20.3
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHh
Q 014743 194 QPKGVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~LakalA~ 217 (419)
|+-++.+.|.+++|||||+.+|..
T Consensus 2 ~~ini~iiGhvd~GKSTL~~~Ll~ 25 (204)
T d2c78a3 2 PHVNVGTIGHVDHGKTTLTAALTY 25 (204)
T ss_dssp CEEEEEEECSTTSSHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCcHHHHHHHHHH
Confidence 335688999999999999999953
No 271
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=77.30 E-value=0.65 Score=41.84 Aligned_cols=26 Identities=31% Similarity=0.326 Sum_probs=21.7
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHHh
Q 014743 192 IAQPKGVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 192 i~~p~~iLL~GPpGtGKT~LakalA~ 217 (419)
+..+..+++.|++|+|||+++..++.
T Consensus 65 ig~GQr~~If~~~g~GKt~ll~~~~~ 90 (285)
T d2jdia3 65 IGRGQRELIIGDRQTGKTSIAIDTII 90 (285)
T ss_dssp CBTTCBCEEEESTTSSHHHHHHHHHH
T ss_pred ccCCCEEEeecCCCCChHHHHHHHHH
Confidence 35677899999999999999887764
No 272
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]}
Probab=77.05 E-value=1.2 Score=40.84 Aligned_cols=44 Identities=23% Similarity=0.422 Sum_probs=27.1
Q ss_pred CcccccC----cHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHH
Q 014743 159 TYDMIGG----LDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212 (419)
Q Consensus 159 ~~~~I~G----~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~La 212 (419)
+|+.|-| ++++.+.+...|...+ . .....++-||.+|+|||+.+
T Consensus 53 ~FD~vf~~~~~q~~vy~~v~~~v~~~l------~----G~n~~i~aYGqtgSGKT~T~ 100 (342)
T d1f9va_ 53 KFDKIFDQQDTNVDVFKEVGQLVQSSL------D----GYNVCIFAYGQTGSGKTFTM 100 (342)
T ss_dssp EESEEECTTCCHHHHHHHHHHHHGGGG------G----TCCEEEEEECCTTSSHHHHH
T ss_pred ecCeEeCCCCCHHHHHHHhhhhhcchh------c----ccccceeeeeccCCcccccc
Confidence 4555544 5666665554443321 1 23456778999999999876
No 273
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=76.90 E-value=1.3 Score=39.56 Aligned_cols=40 Identities=20% Similarity=0.164 Sum_probs=29.1
Q ss_pred ccCcHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHhc
Q 014743 163 IGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHH 218 (419)
Q Consensus 163 I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~ 218 (419)
+--.+-|++.+..++.. +..++.-|+|+|||.++-+++..
T Consensus 112 ~~~rdyQ~~av~~~l~~----------------~~~il~~pTGsGKT~i~~~i~~~ 151 (282)
T d1rifa_ 112 IEPHWYQKDAVFEGLVN----------------RRRILNLPTSAGRSLIQALLARY 151 (282)
T ss_dssp CCCCHHHHHHHHHHHHH----------------SEEEECCCTTSCHHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHhc----------------CCceeEEEcccCccHHHHHHHHH
Confidence 44567777777777643 23577789999999988888753
No 274
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=76.69 E-value=1 Score=37.92 Aligned_cols=32 Identities=22% Similarity=0.287 Sum_probs=23.8
Q ss_pred EEEE-cCCCChHHHHHHHHHhcc---CCceEEEeCc
Q 014743 198 VLLY-GPPGTGKTLLARAVAHHT---DCTFIRVSGS 229 (419)
Q Consensus 198 iLL~-GPpGtGKT~LakalA~~~---~~~~i~v~~s 229 (419)
|.++ |-.|+||||++-.||..+ +..+..|++.
T Consensus 4 Iav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D 39 (232)
T d1hyqa_ 4 ITVASGKGGTGKTTITANLGVALAQLGHDVTIVDAD 39 (232)
T ss_dssp EEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 4444 889999999999988754 5666666653
No 275
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=76.26 E-value=0.38 Score=44.23 Aligned_cols=47 Identities=17% Similarity=0.131 Sum_probs=28.0
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcchhhhhhchhHHHHHHHHHHHHhh
Q 014743 195 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREH 253 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~~~~~g~~~~~i~~lf~~a~~~ 253 (419)
...++-||.+|+|||+..---- ........|-..+.++.+|......
T Consensus 85 n~~i~aYGqTGSGKTyTm~G~~------------~~~~~~~~Giipr~~~~lf~~~~~~ 131 (330)
T d1ry6a_ 85 VCSCFAYGQTGSGKTYTMLGSQ------------PYGQSDTPGIFQYAAGDIFTFLNIY 131 (330)
T ss_dssp EEEEEEECCTTSSHHHHHHBSS------------STTTSSCBCHHHHHHHHHHHHHHHH
T ss_pred CeEEEeeeccccccceeeeccc------------ccccccCCCchhHHHhhhhhhhhhh
Confidence 4568889999999998863110 0000112355566677777766543
No 276
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=76.18 E-value=1.2 Score=37.62 Aligned_cols=33 Identities=24% Similarity=0.348 Sum_probs=25.2
Q ss_pred eEEEE-cCCCChHHHHHHHHHhcc---CCceEEEeCc
Q 014743 197 GVLLY-GPPGTGKTLLARAVAHHT---DCTFIRVSGS 229 (419)
Q Consensus 197 ~iLL~-GPpGtGKT~LakalA~~~---~~~~i~v~~s 229 (419)
-|.++ +-.|+||||++-.||..+ +..+.-+|+.
T Consensus 4 vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D 40 (237)
T d1g3qa_ 4 IISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD 40 (237)
T ss_dssp EEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 45566 678999999999998754 6677777753
No 277
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=75.83 E-value=0.75 Score=38.50 Aligned_cols=23 Identities=30% Similarity=0.387 Sum_probs=18.5
Q ss_pred CCeEEEEcCCCChHHHHHHHHHh
Q 014743 195 PKGVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~LakalA~ 217 (419)
++.+++.-|+|+|||.......-
T Consensus 40 g~~vlv~apTGsGKT~~~~~~~~ 62 (206)
T d1oywa2 40 GRDCLVVMPTGGGKSLCYQIPAL 62 (206)
T ss_dssp TCCEEEECSCHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCCCCCcchhhhhhh
Confidence 46799999999999987754443
No 278
>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=74.90 E-value=0.79 Score=35.85 Aligned_cols=25 Identities=12% Similarity=0.032 Sum_probs=20.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhcc
Q 014743 195 PKGVLLYGPPGTGKTLLARAVAHHT 219 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~LakalA~~~ 219 (419)
+-.++|.|-+|+||+++|++|...+
T Consensus 6 gf~i~~tg~~~~gk~~ia~al~~~l 30 (122)
T d1g8fa3 6 GFSIVLGNSLTVSREQLSIALLSTF 30 (122)
T ss_dssp CEEEEECTTCCSCHHHHHHHHHHHH
T ss_pred ceEEEEeCCCCCCHHHHHHHHHHHH
Confidence 4458889999999999999997543
No 279
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=74.06 E-value=0.72 Score=41.33 Aligned_cols=26 Identities=27% Similarity=0.345 Sum_probs=21.0
Q ss_pred CCCCCeEEEEcCCCChHHHHHHHHHh
Q 014743 192 IAQPKGVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 192 i~~p~~iLL~GPpGtGKT~LakalA~ 217 (419)
+..+..+++.|++|+|||+|+..++.
T Consensus 64 ig~GQr~~Ifg~~g~GKt~l~~~~~~ 89 (276)
T d1fx0a3 64 VGRGQRELIIGDRQTGKTAVATDTIL 89 (276)
T ss_dssp CBTTCBCBEEESSSSSHHHHHHHHHH
T ss_pred ccCCceEeeccCCCCChHHHHHHHHh
Confidence 34567799999999999999986544
No 280
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=73.54 E-value=0.84 Score=46.21 Aligned_cols=27 Identities=22% Similarity=0.431 Sum_probs=23.5
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhcc
Q 014743 193 AQPKGVLLYGPPGTGKTLLARAVAHHT 219 (419)
Q Consensus 193 ~~p~~iLL~GPpGtGKT~LakalA~~~ 219 (419)
..+..|++.|.+|+|||+.+|.|-+++
T Consensus 84 ~~~QsIiisGeSGsGKTe~~k~il~yL 110 (684)
T d1lkxa_ 84 QENQCVIISGESGAGKTEASKKIMQFL 110 (684)
T ss_dssp CCCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCeEEEEEcCCCCCHHHHHHHHHHHH
Confidence 456789999999999999999998765
No 281
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}
Probab=73.43 E-value=1.2 Score=39.33 Aligned_cols=33 Identities=18% Similarity=0.286 Sum_probs=24.1
Q ss_pred eEEEEcCCCChHHHHHHHHHhcc---CCceEEEeCc
Q 014743 197 GVLLYGPPGTGKTLLARAVAHHT---DCTFIRVSGS 229 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~~~---~~~~i~v~~s 229 (419)
.|.++|-=|+||||++-.||..+ +..+.-||+.
T Consensus 4 ~IaisgKGGVGKTT~a~NLA~~LA~~G~rVLlID~D 39 (289)
T d2afhe1 4 QCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCD 39 (289)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEecC
Confidence 35679999999999777766533 6667777653
No 282
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=72.92 E-value=0.88 Score=46.25 Aligned_cols=27 Identities=30% Similarity=0.411 Sum_probs=23.0
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhcc
Q 014743 193 AQPKGVLLYGPPGTGKTLLARAVAHHT 219 (419)
Q Consensus 193 ~~p~~iLL~GPpGtGKT~LakalA~~~ 219 (419)
.....|++.|.+|+|||..+|.+-+++
T Consensus 123 ~~nQsIiisGeSGaGKTe~~k~il~yL 149 (712)
T d1d0xa2 123 RQNQSLLITGESGAGKTENTKKVIQYL 149 (712)
T ss_dssp TCCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCceEEEeCCCCCCHHHHHHHHHHHH
Confidence 346789999999999999999887654
No 283
>d1ni3a1 c.37.1.8 (A:11-306) YchF GTP-binding protein N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=72.10 E-value=1.2 Score=39.74 Aligned_cols=24 Identities=25% Similarity=0.379 Sum_probs=20.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHh
Q 014743 194 QPKGVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~LakalA~ 217 (419)
.+..+-|.|.|.||||||-.++.+
T Consensus 9 ~~~kiGivG~Pn~GKSTlfnalT~ 32 (296)
T d1ni3a1 9 NNLKTGIVGMPNVGKSTFFRAITK 32 (296)
T ss_dssp SCCEEEEEECSSSSHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHC
Confidence 345689999999999999999975
No 284
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=71.61 E-value=0.98 Score=45.87 Aligned_cols=27 Identities=26% Similarity=0.364 Sum_probs=23.5
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhcc
Q 014743 193 AQPKGVLLYGPPGTGKTLLARAVAHHT 219 (419)
Q Consensus 193 ~~p~~iLL~GPpGtGKT~LakalA~~~ 219 (419)
..+..|++.|.+|+|||+.+|.+.+++
T Consensus 89 ~~~Q~IiisGeSGaGKTe~~k~il~yL 115 (710)
T d1br2a2 89 REDQSILCTGESGAGKTENTKKVIQYL 115 (710)
T ss_dssp TCCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCHHHHHHHHHHHH
Confidence 456789999999999999999988765
No 285
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=71.52 E-value=0.96 Score=46.58 Aligned_cols=27 Identities=26% Similarity=0.458 Sum_probs=22.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhcc
Q 014743 193 AQPKGVLLYGPPGTGKTLLARAVAHHT 219 (419)
Q Consensus 193 ~~p~~iLL~GPpGtGKT~LakalA~~~ 219 (419)
..+..|++.|.+|+|||..+|.+-+++
T Consensus 121 ~~~QsIiisGeSGaGKTe~~K~il~yL 147 (794)
T d2mysa2 121 RENQSILITGESGAGKTVNTKRVIQYF 147 (794)
T ss_dssp TCCEEEEEEECTTSCHHHHHHHHHHHH
T ss_pred CCCcEEEEEcCCCCCHHHHHHHHHHHH
Confidence 456789999999999999998877654
No 286
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]}
Probab=71.47 E-value=0.61 Score=43.40 Aligned_cols=18 Identities=33% Similarity=0.547 Sum_probs=15.0
Q ss_pred CCeEEEEcCCCChHHHHH
Q 014743 195 PKGVLLYGPPGTGKTLLA 212 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~La 212 (419)
...++-||.+|+|||+..
T Consensus 114 n~tifaYGqTGSGKTyTm 131 (362)
T d1v8ka_ 114 KATCFAYGQTGSGKTHTM 131 (362)
T ss_dssp EEEEEEEESTTSSHHHHH
T ss_pred CceEEeeccCCCCCceee
Confidence 346778999999999885
No 287
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=70.65 E-value=1.1 Score=45.75 Aligned_cols=27 Identities=22% Similarity=0.402 Sum_probs=23.4
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhcc
Q 014743 193 AQPKGVLLYGPPGTGKTLLARAVAHHT 219 (419)
Q Consensus 193 ~~p~~iLL~GPpGtGKT~LakalA~~~ 219 (419)
..+..|++.|.+|+|||..+|.+-+++
T Consensus 92 ~~~Q~IiisGeSGsGKTe~~k~il~~l 118 (730)
T d1w7ja2 92 ERNQSIIVSGESGAGKTVSAKYAMRYF 118 (730)
T ss_dssp TCCEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHH
Confidence 457789999999999999999887754
No 288
>d1z3ix2 c.37.1.19 (X:92-389) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=70.02 E-value=7.4 Score=34.12 Aligned_cols=44 Identities=27% Similarity=0.312 Sum_probs=28.0
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhc----c------CCceEEEeCcchhhhhh
Q 014743 193 AQPKGVLLYGPPGTGKTLLARAVAHH----T------DCTFIRVSGSELVQKYI 236 (419)
Q Consensus 193 ~~p~~iLL~GPpGtGKT~LakalA~~----~------~~~~i~v~~s~l~~~~~ 236 (419)
..+.|.+|.=..|+|||..+=++... . ...++.|....+...|.
T Consensus 77 ~~~~g~iLaDemGlGKT~qaia~l~~l~~~~~~~~~~~~~~LIV~P~sl~~qW~ 130 (298)
T d1z3ix2 77 ENSYGCIMADEMGLGKTLQCITLIWTLLKQSPDCKPEIDKVIVVSPSSLVRNWY 130 (298)
T ss_dssp TTCCEEEECCCTTSCHHHHHHHHHHHHHHCCTTSSCSCSCEEEEECHHHHHHHH
T ss_pred ccCCceEEEeCCCCCHHHHHHHHHHHHHHhcccccCCCCcEEEEccchhhHHHH
Confidence 45778999999999999755443321 1 12356666666655543
No 289
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis [TaxId: 1423]}
Probab=69.91 E-value=1.3 Score=39.16 Aligned_cols=25 Identities=28% Similarity=0.470 Sum_probs=21.7
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhc
Q 014743 194 QPKGVLLYGPPGTGKTLLARAVAHH 218 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~LakalA~~ 218 (419)
.+-.+++.|-|.+|||+|+.+|.+.
T Consensus 111 ~~~~v~vvG~PNvGKSsliN~L~~~ 135 (273)
T d1puja_ 111 RAIRALIIGIPNVGKSTLINRLAKK 135 (273)
T ss_dssp CCEEEEEEESTTSSHHHHHHHHHTS
T ss_pred CceEEEEEecCccchhhhhhhhhcc
Confidence 3445899999999999999999974
No 290
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=68.85 E-value=1.7 Score=38.45 Aligned_cols=22 Identities=14% Similarity=0.255 Sum_probs=19.9
Q ss_pred eEEEEcCCCChHHHHHHHHHhc
Q 014743 197 GVLLYGPPGTGKTLLARAVAHH 218 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~~ 218 (419)
-+.+.|.-++|||+|+.+|.+.
T Consensus 28 ~ivvvG~~SsGKSsliNaLlg~ 49 (299)
T d2akab1 28 QIAVVGGQSAGKSSVLENFVGR 49 (299)
T ss_dssp EEEEEEBTTSCHHHHHHHHHTS
T ss_pred eEEEEcCCCCCHHHHHHHHhCC
Confidence 4789999999999999999973
No 291
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
Probab=68.29 E-value=1.6 Score=36.35 Aligned_cols=32 Identities=22% Similarity=0.322 Sum_probs=25.1
Q ss_pred EEEEcCCCChHHHHHHHHHhccCCceEEEeCcc
Q 014743 198 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSE 230 (419)
Q Consensus 198 iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~ 230 (419)
+|+.|+..+|||..|..++... .+.++|..+.
T Consensus 2 iLVtGGarSGKS~~AE~l~~~~-~~~~YiAT~~ 33 (180)
T d1c9ka_ 2 ILVTGGARSGKSRHAEALIGDA-PQVLYIATSQ 33 (180)
T ss_dssp EEEEECTTSSHHHHHHHHHCSC-SSEEEEECCC
T ss_pred EEEECCCCccHHHHHHHHHhcC-CCcEEEEccC
Confidence 6899999999999999998654 3556665543
No 292
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=67.96 E-value=1.2 Score=45.73 Aligned_cols=26 Identities=27% Similarity=0.367 Sum_probs=22.4
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhcc
Q 014743 194 QPKGVLLYGPPGTGKTLLARAVAHHT 219 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~LakalA~~~ 219 (419)
.+..|++.|.+|+|||..+|.+-+++
T Consensus 120 ~nQ~IiisGESGaGKTe~~K~il~yL 145 (789)
T d1kk8a2 120 ENQSCLITGESGAGKTENTKKVIMYL 145 (789)
T ss_dssp SEEEEEEECSTTSSHHHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCCHHHHHHHHHHHH
Confidence 45689999999999999998887754
No 293
>d1g5ta_ c.37.1.11 (A:) ATP:corrinoid adenosyltransferase CobA {Salmonella typhimurium [TaxId: 90371]}
Probab=67.80 E-value=15 Score=29.36 Aligned_cols=69 Identities=12% Similarity=0.175 Sum_probs=39.2
Q ss_pred HHHHHHHHHh----hCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCeEEEEEeCCcchhhHHh
Q 014743 243 VRELFVMARE----HAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQAL 318 (419)
Q Consensus 243 i~~lf~~a~~----~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~~ld~al 318 (419)
.+..++.|+. ..+.+|++|||-....-. -.+ ...+.++|+. ...++=||+|-+. .++.|
T Consensus 79 a~~~~~~a~~~~~~~~~dllILDEi~~Ai~~g------li~---~~~v~~ll~~-----rp~~~evVlTGr~---~p~~L 141 (157)
T d1g5ta_ 79 CMAVWQHGKRMLADPLLDMVVLDELTYMVAYD------YLP---LEEVISALNA-----RPGHQTVIITGRG---CHRDI 141 (157)
T ss_dssp HHHHHHHHHHHTTCTTCSEEEEETHHHHHHTT------SSC---HHHHHHHHHT-----SCTTCEEEEECSS---CCHHH
T ss_pred HHHHHHHHHHHhhcCccCEEeHHHHHHHHHcC------CCC---HHHHHHHHHh-----CCCCCEEEEECCC---CCHHH
Confidence 3455555553 458899999987643221 111 1234445543 3456778999665 45566
Q ss_pred cCCCceeEEEEc
Q 014743 319 LRPGRIDRKIEF 330 (419)
Q Consensus 319 lr~gRfd~~I~~ 330 (419)
+. +-|.+-++
T Consensus 142 ~e--~ADlVTEm 151 (157)
T d1g5ta_ 142 LD--LADTVSEL 151 (157)
T ss_dssp HH--HCSEEEEC
T ss_pred HH--hcceeeee
Confidence 65 66655544
No 294
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=67.42 E-value=1.3 Score=39.89 Aligned_cols=20 Identities=25% Similarity=0.403 Sum_probs=18.3
Q ss_pred EEEEcCCCChHHHHHHHHHh
Q 014743 198 VLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 198 iLL~GPpGtGKT~LakalA~ 217 (419)
|-|.|.|.||||||..+|.+
T Consensus 3 v~lvG~pn~GKStlfn~lt~ 22 (319)
T d1wxqa1 3 IGVVGKPNVGKSTFFSAATL 22 (319)
T ss_dssp EEEEECTTSSHHHHHHHHHC
T ss_pred EeEECCCCCCHHHHHHHHHC
Confidence 67999999999999999964
No 295
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=67.10 E-value=1.5 Score=40.41 Aligned_cols=24 Identities=13% Similarity=0.259 Sum_probs=20.9
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHh
Q 014743 194 QPKGVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~LakalA~ 217 (419)
.-++|.+.|..|+|||||+.+|..
T Consensus 16 ~IRNI~iiGhvd~GKTTL~d~Ll~ 39 (341)
T d1n0ua2 16 NVRNMSVIAHVDHGKSTLTDSLVQ 39 (341)
T ss_dssp GEEEEEEECCGGGTHHHHHHHHHH
T ss_pred cCcEEEEEeCCCCcHHHHHHHHHH
Confidence 346799999999999999999963
No 296
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]}
Probab=67.08 E-value=1.6 Score=39.99 Aligned_cols=18 Identities=39% Similarity=0.645 Sum_probs=15.2
Q ss_pred CCeEEEEcCCCChHHHHH
Q 014743 195 PKGVLLYGPPGTGKTLLA 212 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~La 212 (419)
...++-||++|+|||+..
T Consensus 81 n~~i~aYGqtgSGKTyTm 98 (345)
T d1x88a1 81 NCTIFAYGQTGTGKTFTM 98 (345)
T ss_dssp EEEEEEEECTTSSHHHHH
T ss_pred CceEEeeeeccccceEEe
Confidence 356888999999999876
No 297
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]}
Probab=67.02 E-value=1.9 Score=39.47 Aligned_cols=43 Identities=21% Similarity=0.362 Sum_probs=27.9
Q ss_pred CCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcchhhhhhchhHHHHHHHHHHHHh
Q 014743 195 PKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMARE 252 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~~~~~g~~~~~i~~lf~~a~~ 252 (419)
...++-||++|+|||+.+ .|.+ + ....|-..+.+..+|.....
T Consensus 87 n~ti~aYGqTgSGKT~Tm------~G~~-------~--~~~~Glipr~l~~lf~~~~~ 129 (349)
T d2zfia1 87 NVCIFAYGQTGAGKSYTM------MGKQ-------E--KDQQGIIPQLCEDLFSRIND 129 (349)
T ss_dssp CEEEEEECSTTSSHHHHH------TBCS-------G--GGCBCHHHHHHHHHHHHHHT
T ss_pred CceeeeeccCCCCCceee------ccCc-------c--ccccCchHHHHhhhhhhccc
Confidence 467888999999999875 1110 0 11245566677788877653
No 298
>d1htaa_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanothermus fervidus, histone A [TaxId: 2180]}
Probab=65.99 E-value=3.6 Score=28.12 Aligned_cols=32 Identities=25% Similarity=0.238 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHH
Q 014743 371 ELKAVCTEAGMFALRERRIHVTQEDFEMAVAK 402 (419)
Q Consensus 371 di~~l~~~A~~~a~~~~~~~vt~eD~~~Al~~ 402 (419)
-|..++++|...+...++..|+.+|+..|+++
T Consensus 36 fi~~l~~~a~~~a~~~kRkTi~~~DV~~Alk~ 67 (68)
T d1htaa_ 36 MGEEIASEAVKLAKHAGRKTIKAEDIELARKM 67 (68)
T ss_dssp HHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHh
Confidence 46688888999998899999999999999975
No 299
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=65.54 E-value=1.5 Score=41.05 Aligned_cols=19 Identities=32% Similarity=0.368 Sum_probs=15.3
Q ss_pred CCCeEEEEcCCCChHHHHH
Q 014743 194 QPKGVLLYGPPGTGKTLLA 212 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~La 212 (419)
..+.+|+.+.+|||||+++
T Consensus 15 ~~g~~lv~A~AGsGKT~~l 33 (485)
T d1w36b1 15 LQGERLIEASAGTGKTFTI 33 (485)
T ss_dssp CSSCEEEECCTTSCHHHHH
T ss_pred CCCCeEEEEcCchHHHHHH
Confidence 3456888999999999854
No 300
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
Probab=65.35 E-value=1.3 Score=38.31 Aligned_cols=16 Identities=25% Similarity=0.532 Sum_probs=14.6
Q ss_pred CCeEEEEcCCCChHHH
Q 014743 195 PKGVLLYGPPGTGKTL 210 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~ 210 (419)
++.+++..|+|||||+
T Consensus 58 g~dvvi~a~TGsGKTl 73 (238)
T d1wrba1 58 HRDIMACAQTGSGKTA 73 (238)
T ss_dssp TCCEEEECCTTSSHHH
T ss_pred CCCEEEECCCCCCcce
Confidence 4679999999999998
No 301
>d1jala1 c.37.1.8 (A:1-278) YchF GTP-binding protein N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=63.18 E-value=2.3 Score=37.44 Aligned_cols=22 Identities=27% Similarity=0.344 Sum_probs=19.6
Q ss_pred CeEEEEcCCCChHHHHHHHHHh
Q 014743 196 KGVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~LakalA~ 217 (419)
..+-|.|-|.+|||||-.++..
T Consensus 3 ~~~GivG~Pn~GKSTlf~~lt~ 24 (278)
T d1jala1 3 FKCGIVGLPNVGKSTLFNALTK 24 (278)
T ss_dssp CEEEEECCTTSSHHHHHHHHHH
T ss_pred ceEEEECCCCCCHHHHHHHHHC
Confidence 3578999999999999999975
No 302
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=62.89 E-value=2.4 Score=35.35 Aligned_cols=25 Identities=24% Similarity=0.295 Sum_probs=21.5
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHh
Q 014743 193 AQPKGVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 193 ~~p~~iLL~GPpGtGKT~LakalA~ 217 (419)
+|.-+|.+.|....|||||+.+|..
T Consensus 6 ~p~ini~iiGhVd~GKSTL~~~L~~ 30 (205)
T d2qn6a3 6 QPEVNIGVVGHVDHGKTTLVQAITG 30 (205)
T ss_dssp CCCEEEEEECSTTSSHHHHHHHHHS
T ss_pred CCCeEEEEEEccCCcHHHHHHHHHh
Confidence 3445799999999999999999975
No 303
>d1z63a1 c.37.1.19 (A:432-661) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=60.29 E-value=6.2 Score=33.09 Aligned_cols=40 Identities=23% Similarity=0.180 Sum_probs=27.0
Q ss_pred CCCeEEEEcCCCChHHHHHHHHHhcc-----CCceEEEeCcchhh
Q 014743 194 QPKGVLLYGPPGTGKTLLARAVAHHT-----DCTFIRVSGSELVQ 233 (419)
Q Consensus 194 ~p~~iLL~GPpGtGKT~LakalA~~~-----~~~~i~v~~s~l~~ 233 (419)
.+.|.+|.=++|+|||..+=+++..+ ..+++.|....+..
T Consensus 30 ~~~g~iLaDe~GlGKT~~~i~~~~~~~~~~~~~~~LIv~p~~l~~ 74 (230)
T d1z63a1 30 LGFGICLADDMGLGKTLQTIAVFSDAKKENELTPSLVICPLSVLK 74 (230)
T ss_dssp TTCCEEECCCTTSCHHHHHHHHHHHHHHTTCCSSEEEEECSTTHH
T ss_pred cCCCEEEEeCCCCChHHHHHHhhhhhhhcccccccceecchhhhh
Confidence 45678899999999999887776533 23455555554443
No 304
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.60 E-value=1.9 Score=38.32 Aligned_cols=23 Identities=30% Similarity=0.284 Sum_probs=19.8
Q ss_pred CeEEEEcCCCChHHHHHHHHHhc
Q 014743 196 KGVLLYGPPGTGKTLLARAVAHH 218 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~LakalA~~ 218 (419)
.-|-+.||.+||||+|+..+++.
T Consensus 33 ~vvsi~G~~~sGKS~llN~l~~~ 55 (277)
T d1f5na2 33 VVVAIVGLYRTGKSYLMNKLAGK 55 (277)
T ss_dssp EEEEEEEBTTSSHHHHHHHHTTC
T ss_pred EEEEEECCCCCCHHHHHHHHcCC
Confidence 34668999999999999999864
No 305
>d1d2ea3 c.37.1.8 (A:55-250) Elongation factor Tu (EF-Tu), N-terminal (G) domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=59.36 E-value=2.3 Score=35.55 Aligned_cols=22 Identities=32% Similarity=0.318 Sum_probs=19.6
Q ss_pred CeEEEEcCCCChHHHHHHHHHh
Q 014743 196 KGVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~LakalA~ 217 (419)
-++.+.|-++.|||||+.+|..
T Consensus 4 ini~iiGHvd~GKSTL~~~l~~ 25 (196)
T d1d2ea3 4 VNVGTIGHVDHGKTTLTAAITK 25 (196)
T ss_dssp EEEEEESSTTSSHHHHHHHHHH
T ss_pred cEEEEEeCCCCcHHHHHHHHHH
Confidence 4688999999999999999964
No 306
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit cysN/C, EF-Tu domain G-like domain {Pseudomonas syringae pv. tomato [TaxId: 323]}
Probab=57.43 E-value=3.4 Score=35.24 Aligned_cols=25 Identities=24% Similarity=0.319 Sum_probs=20.8
Q ss_pred CeEEEEcCCCChHHHHHHHHHhccC
Q 014743 196 KGVLLYGPPGTGKTLLARAVAHHTD 220 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~LakalA~~~~ 220 (419)
-.|.+.|-..+|||||+.+|....+
T Consensus 10 ~~i~viGHVd~GKSTL~~~Ll~~~g 34 (222)
T d1zunb3 10 LRFLTCGNVDDGKSTLIGRLLHDSK 34 (222)
T ss_dssp EEEEEECCTTSSHHHHHHHHHHHTT
T ss_pred ceEEEEcCCCCCHHHHHHHHHHHcC
Confidence 3478999999999999999976543
No 307
>d1tafb_ a.22.1.3 (B:) TAF(II)62 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=56.13 E-value=5.8 Score=27.49 Aligned_cols=32 Identities=22% Similarity=0.435 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHH
Q 014743 370 AELKAVCTEAGMFALRERRIHVTQEDFEMAVA 401 (419)
Q Consensus 370 adi~~l~~~A~~~a~~~~~~~vt~eD~~~Al~ 401 (419)
--|+.++++|..+.....+..+|.+|++.|++
T Consensus 38 YRl~eiiQeA~KFMrhskR~~Ltt~Did~ALk 69 (70)
T d1tafb_ 38 IKLKRIVQDAAKFMNHAKRQKLSVRDIDMSLK 69 (70)
T ss_dssp HHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhccCcCcHHHHHHHHc
Confidence 35778999999888888899999999999985
No 308
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=55.98 E-value=13 Score=32.33 Aligned_cols=55 Identities=16% Similarity=0.327 Sum_probs=39.7
Q ss_pred HHHHHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCeEEEEEeCCcchhhH
Q 014743 246 LFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQ 316 (419)
Q Consensus 246 lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~~ld~ 316 (419)
.+.......|.++++||++. ..|+.....+.+++.... .++=+|+||++|..++.
T Consensus 238 ~~~~~~~~~~~~~~ide~e~-----------~L~~~~~~~l~~~l~~~~-----~~~Q~iitTh~~~~~~~ 292 (329)
T g1xew.1 238 VFAIQKFKPAPFYLFDEIDA-----------HLDDANVKRVADLIKESS-----KESQFIVITLRDVMMAN 292 (329)
T ss_dssp HHHHHHHSCCSEEEEESTTT-----------TSCHHHHHHHHHHHHHHT-----TTSEEEEECCCHHHHHH
T ss_pred HHHHHhhcccchhhhhhHHh-----------hcCHHHHHHHHHHHHHhc-----cCCeEEEEeCCHHHHHh
Confidence 33334567788999999776 367777777888877652 34568899999987753
No 309
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha, N-terminal (G) domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=55.01 E-value=3.1 Score=35.32 Aligned_cols=25 Identities=16% Similarity=0.263 Sum_probs=21.1
Q ss_pred CeEEEEcCCCChHHHHHHHHHhccC
Q 014743 196 KGVLLYGPPGTGKTLLARAVAHHTD 220 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~LakalA~~~~ 220 (419)
-+|.+.|--++|||||+.+|....+
T Consensus 4 iNi~viGHVd~GKTTL~~~Ll~~~g 28 (224)
T d1jnya3 4 LNLIVIGHVDHGKSTLVGRLLMDRG 28 (224)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHHB
T ss_pred cEEEEEecCCCCHHHHHHHHHHHcC
Confidence 4688999999999999999975543
No 310
>d1kk1a3 c.37.1.8 (A:6-200) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Probab=54.99 E-value=3.6 Score=33.82 Aligned_cols=21 Identities=29% Similarity=0.414 Sum_probs=19.1
Q ss_pred eEEEEcCCCChHHHHHHHHHh
Q 014743 197 GVLLYGPPGTGKTLLARAVAH 217 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~ 217 (419)
+|.+.|-.+.|||||+.+|..
T Consensus 7 nIaiiGhvd~GKSTL~~~L~g 27 (195)
T d1kk1a3 7 NIGMVGHVDHGKTTLTKALTG 27 (195)
T ss_dssp EEEEECSTTSSHHHHHHHHHT
T ss_pred EEEEEeccCCcHHHHHHHHHh
Confidence 578999999999999999975
No 311
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=51.22 E-value=3.8 Score=36.23 Aligned_cols=22 Identities=14% Similarity=0.389 Sum_probs=20.0
Q ss_pred eEEEEcCCCChHHHHHHHHHhc
Q 014743 197 GVLLYGPPGTGKTLLARAVAHH 218 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~~ 218 (419)
.+++.|..++|||+|+.+|.+.
T Consensus 26 ~ivVvG~~ssGKSSliNaLlG~ 47 (306)
T d1jwyb_ 26 QIVVVGSQSSGKSSVLENIVGR 47 (306)
T ss_dssp EEEEEECSSSSHHHHHHHHHTS
T ss_pred eEEEEeCCCCCHHHHHHHHhCC
Confidence 5789999999999999999874
No 312
>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=50.81 E-value=41 Score=25.89 Aligned_cols=40 Identities=15% Similarity=0.101 Sum_probs=30.7
Q ss_pred hhcCCCCCCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCc
Q 014743 188 ESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGS 229 (419)
Q Consensus 188 ~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s 229 (419)
++.+++++..++++|.-|+|- ++-.+|+..+..++-++.+
T Consensus 21 ~~~~~~~g~~VlV~GaG~vG~--~~~~~ak~~G~~Vi~~~~~ 60 (166)
T d1llua2 21 KQTNARPGQWVAISGIGGLGH--VAVQYARAMGLHVAAIDID 60 (166)
T ss_dssp HHHTCCTTCEEEEECCSHHHH--HHHHHHHHTTCEEEEEESC
T ss_pred HHhCCCCCCEEEEeeccccHH--HHHHHHHHcCCccceecch
Confidence 456788999999999988884 4556777788887777654
No 313
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release factor ERF2, G domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=50.52 E-value=3.3 Score=35.89 Aligned_cols=27 Identities=19% Similarity=0.311 Sum_probs=21.8
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhcc
Q 014743 193 AQPKGVLLYGPPGTGKTLLARAVAHHT 219 (419)
Q Consensus 193 ~~p~~iLL~GPpGtGKT~LakalA~~~ 219 (419)
++.-+|.+.|-.+.|||||+..|...+
T Consensus 22 k~~iNi~iiGHVD~GKSTL~~~Ll~~~ 48 (245)
T d1r5ba3 22 KEHVNIVFIGHVDAGKSTLGGNILFLT 48 (245)
T ss_dssp CEEEEEEEEECGGGTHHHHHHHHHHHT
T ss_pred CCceEEEEEeeCCCCHHHHHHHHHHHc
Confidence 344468899999999999999996544
No 314
>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.40 E-value=14 Score=31.12 Aligned_cols=69 Identities=20% Similarity=0.174 Sum_probs=42.6
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcchhhh-----------------hhchhHHHHHHHHHHHHhhCC
Q 014743 193 AQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQK-----------------YIGEGSRMVRELFVMAREHAP 255 (419)
Q Consensus 193 ~~p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l~~~-----------------~~g~~~~~i~~lf~~a~~~~p 255 (419)
..|+.+|=.| +|+|-|++.=+.|-.-+..++.++..+-... ..|.....+.+++..-.....
T Consensus 58 ~~~k~vLEiG-t~~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gda~e~l~~~~~~~~~~~f 136 (219)
T d2avda1 58 IQAKKALDLG-TFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF 136 (219)
T ss_dssp TTCCEEEEEC-CTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred cCCCeEEEEe-chhhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEeehhhcchhhhhhcccCCc
Confidence 4678888888 6899998877666444667788876543211 223433444444433334456
Q ss_pred ceEEecc
Q 014743 256 SIIFMDE 262 (419)
Q Consensus 256 sVl~iDE 262 (419)
.+||+|-
T Consensus 137 D~ifiD~ 143 (219)
T d2avda1 137 DVAVVDA 143 (219)
T ss_dssp EEEEECS
T ss_pred cEEEEeC
Confidence 7899884
No 315
>d1khba1 c.91.1.1 (A:260-622) Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolyzing) {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.75 E-value=2.7 Score=38.64 Aligned_cols=20 Identities=35% Similarity=0.331 Sum_probs=15.5
Q ss_pred CeEEEEc--CCCChHHHHHHHH
Q 014743 196 KGVLLYG--PPGTGKTLLARAV 215 (419)
Q Consensus 196 ~~iLL~G--PpGtGKT~Lakal 215 (419)
+..-+.| |++||||.||-..
T Consensus 17 ~~~yvaaAFPSaCGKTnlAMl~ 38 (363)
T d1khba1 17 EKKYLAAAFPSACGKTNLAMMN 38 (363)
T ss_dssp CEEEEEEECCTTSCHHHHHTCC
T ss_pred CEEEEEEecCccccchhHHHhC
Confidence 3466666 9999999999754
No 316
>d1ku5a_ a.22.1.2 (A:) Archaeal histone {Archaeon (Pyrococcus horikoshii) [TaxId: 53953]}
Probab=48.26 E-value=6.3 Score=26.64 Aligned_cols=31 Identities=26% Similarity=0.276 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCHHHHHHHHH
Q 014743 371 ELKAVCTEAGMFALRERRIHVTQEDFEMAVA 401 (419)
Q Consensus 371 di~~l~~~A~~~a~~~~~~~vt~eD~~~Al~ 401 (419)
=|..++.+|...+...++..|+.+|+..|++
T Consensus 35 Fi~~l~~~a~~~a~~~~RKTI~~~Dv~~Al~ 65 (66)
T d1ku5a_ 35 YAIEIAKKAVEFARHAGRKTVKVEDIKLAIK 65 (66)
T ss_dssp HHHHHHHHHHHHHHTTTCSEECHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcCCCCCCHHHHHHHHh
Confidence 4668888999999889999999999999985
No 317
>d1f1ea_ a.22.1.2 (A:) Archaeal histone {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=48.03 E-value=9.1 Score=30.43 Aligned_cols=38 Identities=26% Similarity=0.270 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhh
Q 014743 371 ELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKET 408 (419)
Q Consensus 371 di~~l~~~A~~~a~~~~~~~vt~eD~~~Al~~v~~~~~ 408 (419)
-+..++.+|...|...++..|+.+|+..|+..-+|+..
T Consensus 112 fi~~l~~~A~~~a~~~kRkTI~~~DI~~Av~~~~~~~~ 149 (151)
T d1f1ea_ 112 ATEELGEKAAEYADEDGRKTVQGEDVEKAITYSMPKGG 149 (151)
T ss_dssp HHHHHHHHHHHHHHHTTCSEECHHHHHHHHHHHSGGGG
T ss_pred HHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHHcCCCcC
Confidence 46688889999999999999999999999999888654
No 318
>d1f60a3 c.37.1.8 (A:2-240) Elongation factor eEF-1alpha, N-terminal (G) domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=46.76 E-value=5.6 Score=34.18 Aligned_cols=25 Identities=16% Similarity=0.220 Sum_probs=21.6
Q ss_pred CeEEEEcCCCChHHHHHHHHHhccC
Q 014743 196 KGVLLYGPPGTGKTLLARAVAHHTD 220 (419)
Q Consensus 196 ~~iLL~GPpGtGKT~LakalA~~~~ 220 (419)
-+|.+.|-.+.|||||+..|...++
T Consensus 7 iNi~iiGHvD~GKsTl~~~ll~~~g 31 (239)
T d1f60a3 7 INVVVIGHVDSGKSTTTGHLIYKCG 31 (239)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHS
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHcC
Confidence 4789999999999999999976554
No 319
>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=46.42 E-value=57 Score=24.85 Aligned_cols=41 Identities=22% Similarity=0.259 Sum_probs=30.2
Q ss_pred hhcCCCCCCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcc
Q 014743 188 ESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSE 230 (419)
Q Consensus 188 ~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~ 230 (419)
...+++++..+|++|.-+.| .++-.+|...+..++-+++++
T Consensus 21 ~~~~~~~g~~vlv~G~G~iG--~~a~~~a~~~g~~v~~~~~~~ 61 (168)
T d1rjwa2 21 KVTGAKPGEWVAIYGIGGLG--HVAVQYAKAMGLNVVAVDIGD 61 (168)
T ss_dssp HHHTCCTTCEEEEECCSTTH--HHHHHHHHHTTCEEEEECSCH
T ss_pred HHhCCCCCCEEEEeecccch--hhhhHHHhcCCCeEeccCCCH
Confidence 35578899999999998888 456666667777766666543
No 320
>d1miob_ c.92.2.3 (B:) Nitrogenase iron-molybdenum protein, beta chain {Clostridium pasteurianum [TaxId: 1501]}
Probab=44.48 E-value=5.9 Score=37.40 Aligned_cols=63 Identities=21% Similarity=0.156 Sum_probs=32.5
Q ss_pred CCeEEEEcCCCChHHHHHHHH-HhccCCceEEEeCcchhhh--hhchhHHHHHHHHHHHHhhCCceEEe
Q 014743 195 PKGVLLYGPPGTGKTLLARAV-AHHTDCTFIRVSGSELVQK--YIGEGSRMVRELFVMAREHAPSIIFM 260 (419)
Q Consensus 195 p~~iLL~GPpGtGKT~Lakal-A~~~~~~~i~v~~s~l~~~--~~g~~~~~i~~lf~~a~~~~psVl~i 260 (419)
..-+++|||+||. ...+.+ ......+ ..+.++.+.+. -.|..++..+.+-+.++...|.+|++
T Consensus 36 ~~~~ivHgp~GC~--~~~~~~~~~~~~~~-~~~~~T~l~E~d~VfGg~~kL~~~i~~~~~~~~P~~I~v 101 (457)
T d1miob_ 36 NCLPHSHGSQGCC--SYHRTVLSRHFKEP-AMASTSSFTEGASVFGGGSNIKTAVKNIFSLYNPDIIAV 101 (457)
T ss_dssp TEEEEEESCHHHH--HHHHHHHHHHHSSC-CCCEECCCCTTHHHHCSHHHHHHHHHHHHHHTCCSEEEE
T ss_pred CcEEEEECchhHH--HHHhHHHhhcccCC-cccccccCCccceecCcHHHHHHHHHHHHHhcCCCEEEE
Confidence 3557899999993 333332 2222222 11223333322 24544554555555566778887776
No 321
>d2bykb1 a.22.1.3 (B:11-99) Chrac-14 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=43.38 E-value=14 Score=26.40 Aligned_cols=32 Identities=13% Similarity=0.191 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Q 014743 372 LKAVCTEAGMFALRERRIHVTQEDFEMAVAKV 403 (419)
Q Consensus 372 i~~l~~~A~~~a~~~~~~~vt~eD~~~Al~~v 403 (419)
|..|..+|...|...++..|+.+|+..|+..+
T Consensus 35 I~~lt~~A~~~a~~~~rKtI~~~dv~~Al~~~ 66 (89)
T d2bykb1 35 AIFVTSSSTALAHKQNHKTITAKDILQTLTEL 66 (89)
T ss_dssp HHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCCccCHHHHHHHHHHC
Confidence 55677888888888999999999999999875
No 322
>d1dz3a_ c.23.1.1 (A:) Sporulation response regulator Spo0A {Bacillus stearothermophilus [TaxId: 1422]}
Probab=41.88 E-value=53 Score=24.07 Aligned_cols=18 Identities=28% Similarity=0.565 Sum_probs=14.2
Q ss_pred HHHHHHHhhCCceEEecc
Q 014743 245 ELFVMAREHAPSIIFMDE 262 (419)
Q Consensus 245 ~lf~~a~~~~psVl~iDE 262 (419)
+.++.++...|.+||+|=
T Consensus 38 ~al~~~~~~~~dlillD~ 55 (123)
T d1dz3a_ 38 DCLQMLEEKRPDILLLDI 55 (123)
T ss_dssp HHHHHHHHHCCSEEEEES
T ss_pred HHHHHHHhcCCCEEEEcC
Confidence 455667788999999984
No 323
>d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]}
Probab=40.09 E-value=43 Score=24.50 Aligned_cols=85 Identities=19% Similarity=0.139 Sum_probs=41.2
Q ss_pred HHHHHHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCeEEEEEeCCcchhh-HHhcCCCc
Q 014743 245 ELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILD-QALLRPGR 323 (419)
Q Consensus 245 ~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~~ld-~allr~gR 323 (419)
+.++.++...|.+|++|- .- + +.+ ... +.+.+... ....++.||+.|...+.-+ ...+..|
T Consensus 36 ~al~~~~~~~~dlil~D~-~m--p--------~~d--G~e-l~~~ir~~---~~~~~iPii~lt~~~~~~~~~~~~~~G- 97 (123)
T d1mb3a_ 36 SALSIARENKPDLILMDI-QL--P--------EIS--GLE-VTKWLKED---DDLAHIPVVAVTAFAMKGDEERIREGG- 97 (123)
T ss_dssp HHHHHHHHHCCSEEEEES-BC--S--------SSB--HHH-HHHHHHHS---TTTTTSCEEEEC------CHHHHHHHT-
T ss_pred HHHHHHHhCCCCEEEEEe-cc--C--------CCc--HHH-HHHHHHhC---CCcCCCCeEEEEEecCHHHHHHHHHcC-
Confidence 555667778999999994 11 1 111 122 22333332 2234555555554433222 2233333
Q ss_pred eeEEEEcCCCCHHHHHHHHHHHHhh
Q 014743 324 IDRKIEFPNPNEESRLDILKIHSRR 348 (419)
Q Consensus 324 fd~~I~~~~P~~~~r~~Il~~~~~~ 348 (419)
++.. -..|.+.++..+.++..+++
T Consensus 98 ~~~~-l~KP~~~~~L~~~i~~~l~r 121 (123)
T d1mb3a_ 98 CEAY-ISKPISVVHFLETIKRLLER 121 (123)
T ss_dssp CSEE-ECSSCCHHHHHHHHHHHHSC
T ss_pred CCEE-EECCCCHHHHHHHHHHHHhC
Confidence 3432 34455888888877776653
No 324
>d1jbea_ c.23.1.1 (A:) CheY protein {Escherichia coli [TaxId: 562]}
Probab=39.94 E-value=65 Score=23.67 Aligned_cols=86 Identities=17% Similarity=0.135 Sum_probs=44.2
Q ss_pred HHHHHHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCeEEEEEeCCcc--hhhHHhcCCC
Q 014743 245 ELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRID--ILDQALLRPG 322 (419)
Q Consensus 245 ~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~--~ld~allr~g 322 (419)
+.++.+...+|.+|++|= .- .+.+. .+++..+.......++.||+.|...+ ....++ +.|
T Consensus 40 ~a~~~~~~~~~dlii~D~-~m----------P~~dG------~el~~~ir~~~~~~~~piI~lt~~~~~~~~~~a~-~~G 101 (128)
T d1jbea_ 40 DALNKLQAGGYGFVISDW-NM----------PNMDG------LELLKTIRADGAMSALPVLMVTAEAKKENIIAAA-QAG 101 (128)
T ss_dssp HHHHHHTTCCCCEEEEES-CC----------SSSCH------HHHHHHHHC--CCTTCCEEEEESSCCHHHHHHHH-HTT
T ss_pred HHHHHHhcCCCCEEEEec-cc----------ccCCH------HHHHHHHHhCccCCCCcEEEEECcCCHHHHHHHH-HCC
Confidence 445667788999999984 11 11221 12333332222334454555444333 333344 556
Q ss_pred ceeEEEEcCCCCHHHHHHHHHHHHhhcc
Q 014743 323 RIDRKIEFPNPNEESRLDILKIHSRRMN 350 (419)
Q Consensus 323 Rfd~~I~~~~P~~~~r~~Il~~~~~~~~ 350 (419)
-.+ +-..|.+..+....+...+++++
T Consensus 102 ~~~--~l~KP~~~~~L~~~l~~~l~r~~ 127 (128)
T d1jbea_ 102 ASG--YVVKPFTAATLEEKLNKIFEKLG 127 (128)
T ss_dssp CSE--EEESSCCHHHHHHHHHHHHHHHT
T ss_pred CCE--EEECCCCHHHHHHHHHHHHHHcC
Confidence 444 22345688888877777666543
No 325
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=39.37 E-value=42 Score=25.23 Aligned_cols=55 Identities=20% Similarity=0.195 Sum_probs=28.3
Q ss_pred hhhHhhhhccC----cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014743 16 PEEVCAAKGAS----KQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRM 70 (419)
Q Consensus 16 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (419)
++.|+-.-|++ .....-..|+..|++.++..++.+.+++..+......+..+++.
T Consensus 69 ~~~vlV~lG~g~~vE~~~~eA~~~l~~ri~~l~~~~~~l~~~~~~~~~~i~~l~~~~~~ 127 (133)
T d1fxkc_ 69 TSEVIMSVGAGVAIKKNFEDAMESIKSQKNELESTLQKMGENLRAITDIMMKLSPQAEE 127 (133)
T ss_dssp TTEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEecCCeeeeecHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555543 22233346666666666666666655555555554444444433
No 326
>d1n1ja_ a.22.1.3 (A:) Nuclear transcription factor Y subunit beta (Nf-Yb3) {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.33 E-value=22 Score=25.09 Aligned_cols=33 Identities=21% Similarity=0.292 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Q 014743 372 LKAVCTEAGMFALRERRIHVTQEDFEMAVAKVM 404 (419)
Q Consensus 372 i~~l~~~A~~~a~~~~~~~vt~eD~~~Al~~v~ 404 (419)
|..+..+|...|...++..|+.+|+..|+...-
T Consensus 38 i~~lt~~A~~~a~~~~rKTI~~~dv~~Al~~~~ 70 (87)
T d1n1ja_ 38 ISFITSEASERCHQEKRKTINGEDILFAMSTLG 70 (87)
T ss_dssp HHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHcC
Confidence 456778888888889999999999999999764
No 327
>d2huec1 a.22.1.1 (C:20-101) Histone H4 {African clawed frog (Xenopus laevis) [TaxId: 8355]}
Probab=37.28 E-value=10 Score=26.86 Aligned_cols=33 Identities=24% Similarity=0.262 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHH
Q 014743 370 AELKAVCTEAGMFALRERRIHVTQEDFEMAVAK 402 (419)
Q Consensus 370 adi~~l~~~A~~~a~~~~~~~vt~eD~~~Al~~ 402 (419)
.-+..++++|..++-...+..|+.+|+..|+++
T Consensus 41 ~~l~~i~~~a~~~~~hakRKTvt~~DV~~Alkr 73 (82)
T d2huec1 41 VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKR 73 (82)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEECHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHhCCCcCCHHHHHHHHHh
Confidence 356788999999998889999999999999974
No 328
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=35.31 E-value=30 Score=26.14 Aligned_cols=43 Identities=9% Similarity=0.135 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014743 37 LQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQ 79 (419)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (419)
.+-++-+..+++.+++.++.+..+++.+++++..+..+++++.
T Consensus 87 ~eA~~~l~~ri~~l~~~~~~l~~~~~~~~~~i~~l~~~~~~l~ 129 (133)
T d1fxkc_ 87 EDAMESIKSQKNELESTLQKMGENLRAITDIMMKLSPQAEELL 129 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455667788888888888888888888888888888777654
No 329
>d1e52a_ a.2.9.1 (A:) C-terminal UvrC-binding domain of UvrB {Escherichia coli [TaxId: 562]}
Probab=35.20 E-value=18 Score=23.74 Aligned_cols=34 Identities=12% Similarity=0.204 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHH
Q 014743 43 LQLQVRQKTHNLNRLEAQRN-----ELNSRVRMLKEELQ 76 (419)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 76 (419)
+++.+.+++++...+...++ .+|+++..++..+.
T Consensus 15 l~k~i~~Le~~M~~aa~~l~FE~AA~~RD~I~~l~~~l~ 53 (56)
T d1e52a_ 15 LQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELFI 53 (56)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
Confidence 34556666666666655544 67888888887764
No 330
>d1jfib_ a.22.1.3 (B:) Negative cofactor 2, NC2, beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.29 E-value=30 Score=26.66 Aligned_cols=34 Identities=12% Similarity=0.168 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Q 014743 371 ELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVM 404 (419)
Q Consensus 371 di~~l~~~A~~~a~~~~~~~vt~eD~~~Al~~v~ 404 (419)
=|..|..+|...|.+.++..|+.+|+..|+..+-
T Consensus 38 Fi~~lt~~A~~~a~~~~RkTi~~~Dv~~Al~~~~ 71 (135)
T d1jfib_ 38 FIHLISSEANEICNKSEKKTISPEHVIQALESLG 71 (135)
T ss_dssp HHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCCCcccHHHHHHHHHHcC
Confidence 3556778888889889999999999999999864
No 331
>d1kjwa2 c.37.1.1 (A:526-724) Guanylate kinase-like domain of Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=31.20 E-value=18 Score=29.69 Aligned_cols=27 Identities=11% Similarity=0.180 Sum_probs=21.2
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhccCCc
Q 014743 193 AQPKGVLLYGPPGTGKTLLARAVAHHTDCT 222 (419)
Q Consensus 193 ~~p~~iLL~GPpGtGKT~LakalA~~~~~~ 222 (419)
..++-++|.|| ||+++.+.|..+....
T Consensus 7 ~~~Rpivi~Gp---~K~ti~~~L~~~~p~~ 33 (199)
T d1kjwa2 7 HYARPIIILGP---TKDRANDDLLSEFPDK 33 (199)
T ss_dssp CSCCCEEEEST---THHHHHHHHHHHCTTT
T ss_pred CCCCCEEEECc---CHHHHHHHHHHhCccc
Confidence 34677899998 5999999999875433
No 332
>d1h75a_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Escherichia coli [TaxId: 562]}
Probab=31.15 E-value=57 Score=21.71 Aligned_cols=33 Identities=6% Similarity=0.096 Sum_probs=29.6
Q ss_pred eEEEEcCCCChHHHHHHHHHhccCCceEEEeCc
Q 014743 197 GVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGS 229 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s 229 (419)
.|.+|+-|||+--.-|+.+....+.++..++..
T Consensus 2 ki~iYs~~~C~~C~~ak~~L~~~~i~y~~~~i~ 34 (76)
T d1h75a_ 2 RITIYTRNDCVQCHATKRAMENRGFDFEMINVD 34 (76)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHTTCCCEEEETT
T ss_pred EEEEEeCCCCccHHHHHHHHHhcCceeEEEeec
Confidence 378999999999999999999999998888764
No 333
>d1n1jb_ a.22.1.3 (B:) Nuclear transcription factor Y subunit gamma (Nf-Yc2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.97 E-value=16 Score=25.20 Aligned_cols=31 Identities=19% Similarity=0.331 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHhcCCCCCHHHHHHHHHH
Q 014743 372 LKAVCTEAGMFALRERRIHVTQEDFEMAVAK 402 (419)
Q Consensus 372 i~~l~~~A~~~a~~~~~~~vt~eD~~~Al~~ 402 (419)
+..++.+|...|.+.++..|+.+|+..|+..
T Consensus 35 i~~l~~~A~~~a~~~~rkti~~~dl~~av~~ 65 (78)
T d1n1jb_ 35 ITELTLRAWIHTEDNKRRTLQRNDIAMAITK 65 (78)
T ss_dssp HHHHHHHHHHHHHHTTCSEECHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCcCCHHHHHHHHhc
Confidence 4577888888888889999999999999874
No 334
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.44 E-value=73 Score=22.05 Aligned_cols=33 Identities=21% Similarity=0.268 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014743 47 VRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQ 79 (419)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (419)
|..|.++...+......++.+.+.+..++..++
T Consensus 54 I~~L~~~~~~l~~~~~~l~~~~~~L~~~l~~L~ 86 (88)
T d1nkpa_ 54 ILSVQAEEQKLISEEDLLRKRREQLKHKLEQLG 86 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 333344444444444445555555555555543
No 335
>d1m1nb_ c.92.2.3 (B:) Nitrogenase iron-molybdenum protein, beta chain {Azotobacter vinelandii [TaxId: 354]}
Probab=30.10 E-value=19 Score=34.52 Aligned_cols=74 Identities=19% Similarity=0.200 Sum_probs=40.0
Q ss_pred cCCCCCCeEEEEcCCCChHHHHHHH-HHhccCCc--eEEEeCcchhhhhhchhHHHHHHHHHHHHhhCCceEEe------
Q 014743 190 LGIAQPKGVLLYGPPGTGKTLLARA-VAHHTDCT--FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFM------ 260 (419)
Q Consensus 190 ~gi~~p~~iLL~GPpGtGKT~Laka-lA~~~~~~--~i~v~~s~l~~~~~g~~~~~i~~lf~~a~~~~psVl~i------ 260 (419)
.|+ ...-.++|||.||. ...+. +.++...+ ++.-++++--- -+|...+....+-+......|.+|++
T Consensus 79 ~gi-~~~~pivHG~qGC~--~y~r~~~~rhf~ep~~~~sT~m~E~~~-VfGG~~kL~e~I~~~~~~~~P~~I~V~tTC~~ 154 (522)
T d1m1nb_ 79 LGF-EKTMPYVHGSQGCV--AYFRSYFNRHFREPVSCVSDSMTEDAA-VFGGQQNMKDGLQNCKATYKPDMIAVSTTCMA 154 (522)
T ss_dssp TTB-TTEEEEEESCHHHH--HHHHHHHHHHHSSCCCCEECCCCHHHH-HHCSHHHHHHHHHHHHHHHCCSEEEEEECHHH
T ss_pred hcc-CCcEEEeeCcHHHh--hhhhHHhhccCCCCcceeeccCChhhh-hcCcHHHHHHHHHHHHHHhCCCEEEEECCCHH
Confidence 344 34557899999994 33333 33333333 33333332211 23544444455555566678998887
Q ss_pred ----ccccccc
Q 014743 261 ----DEIDSIG 267 (419)
Q Consensus 261 ----DEiD~l~ 267 (419)
|+++.++
T Consensus 155 eiIGDDi~av~ 165 (522)
T d1m1nb_ 155 EVIGDDLNAFI 165 (522)
T ss_dssp HHHTCCHHHHH
T ss_pred HHhcCCHHHHH
Confidence 6666654
No 336
>d1zesa1 c.23.1.1 (A:3-123) PhoB receiver domain {Escherichia coli [TaxId: 562]}
Probab=29.32 E-value=75 Score=23.03 Aligned_cols=84 Identities=20% Similarity=0.199 Sum_probs=43.5
Q ss_pred HHHHHHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCeEEEEEeCCcc--hhhHHhcCCC
Q 014743 245 ELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRID--ILDQALLRPG 322 (419)
Q Consensus 245 ~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~--~ld~allr~g 322 (419)
+.++.+....|.+|++|-- + .+.+ ... +.+.+.... ...++.||+.|...+ ....++ +.|
T Consensus 35 ~al~~l~~~~~dlil~D~~--m---------p~~~--G~~-l~~~lr~~~---~~~~~pvi~lt~~~~~~~~~~~~-~~G 96 (121)
T d1zesa1 35 SAVNQLNEPWPDLILLDWM--L---------PGGS--GIQ-FIKHLKRES---MTRDIPVVMLTARGEEEDRVRGL-ETG 96 (121)
T ss_dssp HHHHHSSSSCCSEEEECSS--C---------TTSC--HHH-HHHHHHHST---TTTTSCEEEEESCCSHHHHHHHH-HHT
T ss_pred HHHHHHHccCCCEEEeecC--C---------CCCC--HHH-HHHHHHhCc---cCCCCeEEEEECCCCHHHHHHHH-HCC
Confidence 5566677889999999951 1 1112 122 333333322 223454555554433 223333 334
Q ss_pred ceeEEEEcCCCCHHHHHHHHHHHHhh
Q 014743 323 RIDRKIEFPNPNEESRLDILKIHSRR 348 (419)
Q Consensus 323 Rfd~~I~~~~P~~~~r~~Il~~~~~~ 348 (419)
-.| . ...|.+.++...-++..+++
T Consensus 97 ~~d-~-l~KP~~~~~L~~~v~~~lrR 120 (121)
T d1zesa1 97 ADD-Y-ITKPFSPKELVARIKAVMRR 120 (121)
T ss_dssp CSE-E-EESSCCHHHHHHHHHHHHHT
T ss_pred CCE-E-EECCCCHHHHHHHHHHHHcC
Confidence 333 3 34456888887777766654
No 337
>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}
Probab=29.12 E-value=1.1e+02 Score=23.25 Aligned_cols=41 Identities=20% Similarity=0.285 Sum_probs=30.4
Q ss_pred hhcCCCCCCeEEEEcCCC-ChHHHHHHHHHhccCCceEEEeCcc
Q 014743 188 ESLGIAQPKGVLLYGPPG-TGKTLLARAVAHHTDCTFIRVSGSE 230 (419)
Q Consensus 188 ~~~gi~~p~~iLL~GPpG-tGKT~LakalA~~~~~~~i~v~~s~ 230 (419)
+...++++..+|++|..| +|- ++-.+|+..++.++-+.+++
T Consensus 22 ~~~~l~~g~~Vlv~ga~g~vG~--~~iqlak~~Ga~Vi~~~~s~ 63 (179)
T d1qora2 22 KTYEIKPDEQFLFHAAAGGVGL--IACQWAKALGAKLIGTVGTA 63 (179)
T ss_dssp TTSCCCTTCEEEESSTTBHHHH--HHHHHHHHHTCEEEEEESSH
T ss_pred HHhCCCCCCEEEEEccccccch--HHHHHHHHhCCeEeecccch
Confidence 344578889999998887 776 44456677888888877664
No 338
>d2ayxa1 c.23.1.1 (A:817-949) Sensor kinase protein RcsC, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=28.89 E-value=1e+02 Score=22.66 Aligned_cols=84 Identities=11% Similarity=0.076 Sum_probs=42.3
Q ss_pred HHHHHHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCeEEEEEeC-CcchhhHHhcCCCc
Q 014743 245 ELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATN-RIDILDQALLRPGR 323 (419)
Q Consensus 245 ~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn-~~~~ld~allr~gR 323 (419)
+.++.....+|.+||+|= ..+ .. .--++ .+.+.+.. ..-.+ +++|.+ ..+....+ ++.|-
T Consensus 43 ea~~~~~~~~~dlillD~---~mP------~~-dG~el----~~~ir~~~---~~~pi-i~lt~~~~~~~~~~~-~~~G~ 103 (133)
T d2ayxa1 43 DALNVLSKNHIDIVLSDV---NMP------NM-DGYRL----TQRIRQLG---LTLPV-IGVTANALAEEKQRC-LESGM 103 (133)
T ss_dssp HHHHHHHHSCCSEEEEEE---SSC------SS-CCHHH----HHHHHHHH---CCSCE-EEEESSTTSHHHHHH-HHCCC
T ss_pred HHHHHHhccCceEEEEec---cCC------CC-CHHHH----HHHHHHhC---CCCCE-EEEeccCCHHHHHHH-HHcCC
Confidence 445667788999999984 111 11 11222 22233321 22233 333333 33333333 44554
Q ss_pred eeEEEEcCCCCHHHHHHHHHHHHhhc
Q 014743 324 IDRKIEFPNPNEESRLDILKIHSRRM 349 (419)
Q Consensus 324 fd~~I~~~~P~~~~r~~Il~~~~~~~ 349 (419)
.| +-..|.+.++....+..++++.
T Consensus 104 ~~--~l~KP~~~~~L~~~l~~~~~r~ 127 (133)
T d2ayxa1 104 DS--CLSKPVTLDVIKQTLTLYAERV 127 (133)
T ss_dssp EE--EEESSCCHHHHHHHHHHHHHHH
T ss_pred CE--EEECCCCHHHHHHHHHHHHHHH
Confidence 44 2344568888888887776543
No 339
>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.31 E-value=77 Score=24.41 Aligned_cols=40 Identities=23% Similarity=0.320 Sum_probs=28.6
Q ss_pred hhcCCCCCCeEEEEcC-CCChHHHHHHHHHhccCCceEEEeCc
Q 014743 188 ESLGIAQPKGVLLYGP-PGTGKTLLARAVAHHTDCTFIRVSGS 229 (419)
Q Consensus 188 ~~~gi~~p~~iLL~GP-pGtGKT~LakalA~~~~~~~i~v~~s 229 (419)
+..+++++..+|++|- .|+|- ++=.+|+..++..+-+..+
T Consensus 22 ~~~~~~~g~~VlV~Ga~G~vG~--~aiq~a~~~G~~vi~~~~~ 62 (174)
T d1yb5a2 22 HSACVKAGESVLVHGASGGVGL--AACQIARAYGLKILGTAGT 62 (174)
T ss_dssp TTSCCCTTCEEEEETCSSHHHH--HHHHHHHHTTCEEEEEESS
T ss_pred HHhCCCCCCEEEEEeccccccc--cccccccccCccccccccc
Confidence 3446788899999996 55664 5555777788887776654
No 340
>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
Probab=27.57 E-value=29 Score=24.93 Aligned_cols=35 Identities=20% Similarity=0.385 Sum_probs=27.7
Q ss_pred CCCCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcch
Q 014743 193 AQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSEL 231 (419)
Q Consensus 193 ~~p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~l 231 (419)
...+.+.|.|--|+|-+.||+.+...- +.|.+|+.
T Consensus 6 ~~~~~ihfiGigG~GMs~LA~~L~~~G----~~VsGSD~ 40 (96)
T d1p3da1 6 RRVQQIHFIGIGGAGMSGIAEILLNEG----YQISGSDI 40 (96)
T ss_dssp TTCCEEEEETTTSTTHHHHHHHHHHHT----CEEEEEES
T ss_pred hhCCEEEEEEECHHHHHHHHHHHHhCC----CEEEEEeC
Confidence 456889999999999999999988643 25666664
No 341
>d1qh8b_ c.92.2.3 (B:) Nitrogenase iron-molybdenum protein, beta chain {Klebsiella pneumoniae [TaxId: 573]}
Probab=27.03 E-value=21 Score=34.10 Aligned_cols=68 Identities=18% Similarity=0.220 Sum_probs=36.2
Q ss_pred CCeEEEEcCCCCh---HHHHHHHHHhccCCceEEEeCcchhhh--hhchhHHHHHHHHHHHHhhCCceEEe---------
Q 014743 195 PKGVLLYGPPGTG---KTLLARAVAHHTDCTFIRVSGSELVQK--YIGEGSRMVRELFVMAREHAPSIIFM--------- 260 (419)
Q Consensus 195 p~~iLL~GPpGtG---KT~LakalA~~~~~~~i~v~~s~l~~~--~~g~~~~~i~~lf~~a~~~~psVl~i--------- 260 (419)
..-.++|||.||. ++++.+ +...++ .+.++.+.+. -+|..++....+-+......|.+|++
T Consensus 82 ~~~p~vHG~qGC~~y~r~~~~r----hf~ep~-~~~sT~m~E~~~VfGG~~~L~~~i~~~~~~~~P~~I~V~tTC~~eiI 156 (519)
T d1qh8b_ 82 NTLPYVHGSQGCVAYFRTYFNR----HFKEPI-ACVSDSMTEDAAVFGGNNNMNLGLQNASALYKPEIIAVSTTCMAEVI 156 (519)
T ss_dssp TEEEEEESCHHHHHHHHHHHHH----HHTSCC-CCEECCCCHHHHHHCSHHHHHHHHHHHHHHHCCSEEEEEECHHHHHH
T ss_pred CCEEEEECchhHHHHHHHHHHh----ccCCCc-cccccCCChhheecCcHHHHHHHHHHHHHhcCCCEEEEecCCChhhC
Confidence 3457899999994 333333 332221 1222333222 23544444444444556678888776
Q ss_pred -ccccccc
Q 014743 261 -DEIDSIG 267 (419)
Q Consensus 261 -DEiD~l~ 267 (419)
|+++.++
T Consensus 157 GDDl~~vi 164 (519)
T d1qh8b_ 157 GDDLQAFI 164 (519)
T ss_dssp TCCHHHHH
T ss_pred CCCHHHHH
Confidence 7777654
No 342
>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}
Probab=26.66 E-value=54 Score=25.58 Aligned_cols=57 Identities=21% Similarity=0.399 Sum_probs=38.3
Q ss_pred CCCeEEEEcCCCC-hHHHHHHHHHhccC-CceEEEeCcchhhhhhchhHHHHHHHHHHHHhhCCceEEecc
Q 014743 194 QPKGVLLYGPPGT-GKTLLARAVAHHTD-CTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDE 262 (419)
Q Consensus 194 ~p~~iLL~GPpGt-GKT~LakalA~~~~-~~~i~v~~s~l~~~~~g~~~~~i~~lf~~a~~~~psVl~iDE 262 (419)
.|+.+.+.|.+|+ |+++ ...+.+..+ ..++-+.+. +++..+.++++...|..+++.+
T Consensus 1 ~pK~I~IlGsTGSIG~~t-L~Vi~~~~d~f~v~~lsa~-----------~N~~~L~~q~~ef~Pk~v~i~d 59 (150)
T d1r0ka2 1 QPRTVTVLGATGSIGHST-LDLIERNLDRYQVIALTAN-----------RNVKDLADAAKRTNAKRAVIAD 59 (150)
T ss_dssp CCEEEEEETTTSHHHHHH-HHHHHHTGGGEEEEEEEES-----------SCHHHHHHHHHHTTCSEEEESC
T ss_pred CCcEEEEECCCcHHHHHH-HHHHHcCCCCcEEEEEEeC-----------CCHHHHHHHHHhhccccceecc
Confidence 3789999999997 5554 455555432 223333332 2466888899999999888765
No 343
>d1p6qa_ c.23.1.1 (A:) CheY protein {Sinorhizobium meliloti, CheY2 [TaxId: 382]}
Probab=25.75 E-value=1.2e+02 Score=22.18 Aligned_cols=85 Identities=15% Similarity=0.084 Sum_probs=45.2
Q ss_pred HHHHHHHhhCCceEEecccccccccccCCCCCCCCHHHHHHHHHHHHHccccccCCCeEEEEEeCCcc-hhhHHhcCCCc
Q 014743 245 ELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRID-ILDQALLRPGR 323 (419)
Q Consensus 245 ~lf~~a~~~~psVl~iDEiD~l~~~r~~~~~~~~~~~~~~~l~~lL~~l~~~~~~~~v~VI~tTn~~~-~ld~allr~gR 323 (419)
+.++.+..++|.+|++|=- + .+.+. .+++..+.......++.||+.|...+ ..-...+..|-
T Consensus 42 ~al~~l~~~~~dlii~D~~--m---------P~~~G------~el~~~lr~~~~~~~~pii~lt~~~~~~~~~~a~~~G~ 104 (129)
T d1p6qa_ 42 QGMKIMAQNPHHLVISDFN--M---------PKMDG------LGLLQAVRANPATKKAAFIILTAQGDRALVQKAAALGA 104 (129)
T ss_dssp HHHHHHHTSCCSEEEECSS--S---------CSSCH------HHHHHHHTTCTTSTTCEEEECCSCCCHHHHHHHHHHTC
T ss_pred HHHHHHHhCCCCeEEeeee--c---------CCCCh------HHHHHHHHhCcccCCCeEEEEEecCCHHHHHHHHHCCC
Confidence 4566677889999999841 1 11221 23344443322334566666554433 22223333343
Q ss_pred eeEEEEcCCCCHHHHHHHHHHHHhh
Q 014743 324 IDRKIEFPNPNEESRLDILKIHSRR 348 (419)
Q Consensus 324 fd~~I~~~~P~~~~r~~Il~~~~~~ 348 (419)
.+ +-..|.+.++....++..+..
T Consensus 105 ~~--~l~KP~~~~~L~~~i~~vl~~ 127 (129)
T d1p6qa_ 105 NN--VLAKPFTIEKMKAAIEAVFGA 127 (129)
T ss_dssp SC--EECCCSSHHHHHHHHHHHHHC
T ss_pred CE--EEECCCCHHHHHHHHHHHHHh
Confidence 33 334456888887777776654
No 344
>d1xbta1 c.37.1.24 (A:18-150) Thymidine kinase, TK1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.57 E-value=29 Score=26.52 Aligned_cols=30 Identities=13% Similarity=0.176 Sum_probs=19.3
Q ss_pred EEEEcCCCChHHHHHHHHHh---ccCCceEEEe
Q 014743 198 VLLYGPPGTGKTLLARAVAH---HTDCTFIRVS 227 (419)
Q Consensus 198 iLL~GPpGtGKT~LakalA~---~~~~~~i~v~ 227 (419)
-+++||-.+|||+-.=..++ ..+..++.++
T Consensus 5 ~li~GpMfsGKTt~Li~~~~~~~~~g~~v~~ik 37 (133)
T d1xbta1 5 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIK 37 (133)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred EEEEecccCHHHHHHHHHHHHHHHcCCcEEEEe
Confidence 47889999999994444333 2345555554
No 345
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=23.55 E-value=77 Score=22.82 Aligned_cols=35 Identities=17% Similarity=0.268 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014743 42 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQ 76 (419)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (419)
.+..+++.+..+++.+..+...+.++++.++.++.
T Consensus 69 ~l~~~~e~l~~~i~~l~~q~~~l~~~l~~~~~~l~ 103 (107)
T d1fxka_ 69 ELQEKLETLQLREKTIERQEERVMKKLQEMQVNIQ 103 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555555555555555555555555544
No 346
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.04 E-value=89 Score=21.54 Aligned_cols=35 Identities=17% Similarity=0.242 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014743 37 LQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRML 71 (419)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (419)
.+.++.++.++..+..+.+.+..+...+..++..+
T Consensus 51 ~~yI~~L~~~~~~l~~~~~~l~~~~~~L~~~l~~L 85 (88)
T d1nkpa_ 51 TAYILSVQAEEQKLISEEDLLRKRREQLKHKLEQL 85 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 45667777778888778887877777777777665
No 347
>d1xx6a1 c.37.1.24 (A:2-142) Thymidine kinase, TK1, N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]}
Probab=22.89 E-value=34 Score=26.45 Aligned_cols=31 Identities=13% Similarity=0.011 Sum_probs=19.9
Q ss_pred eEEEEcCCCChHHHHHHHHHh---ccCCceEEEe
Q 014743 197 GVLLYGPPGTGKTLLARAVAH---HTDCTFIRVS 227 (419)
Q Consensus 197 ~iLL~GPpGtGKT~LakalA~---~~~~~~i~v~ 227 (419)
--+++||-.+|||+-+=..++ ..+..++.++
T Consensus 9 l~lI~GpMfSGKTteLi~~~~~~~~~g~~vl~i~ 42 (141)
T d1xx6a1 9 VEVIVGPMYSGKSEELIRRIRRAKIAKQKIQVFK 42 (141)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEeccccHHHHHHHHHHHHhhhcCCcEEEEE
Confidence 357899999999994444443 2355555544
No 348
>d1i3ca_ c.23.1.1 (A:) Response regulator for cyanobacterial phytochrome {Synechocystis sp. PCC 6803, RCP1 [TaxId: 1148]}
Probab=22.83 E-value=1.4e+02 Score=22.16 Aligned_cols=17 Identities=6% Similarity=-0.007 Sum_probs=10.8
Q ss_pred cCCCCHHHHHHHHHHHH
Q 014743 330 FPNPNEESRLDILKIHS 346 (419)
Q Consensus 330 ~~~P~~~~r~~Il~~~~ 346 (419)
..+.+.++..+.++...
T Consensus 114 ~KP~~~~~L~~~i~~l~ 130 (144)
T d1i3ca_ 114 TKSRNLKDLFKMVQGIE 130 (144)
T ss_dssp ECCSSHHHHHHHHHHHH
T ss_pred ECCCCHHHHHHHHHHHH
Confidence 34568888777766543
No 349
>d1ab4a_ e.11.1.1 (A:) DNA Gyrase A {Escherichia coli [TaxId: 562]}
Probab=22.75 E-value=58 Score=30.56 Aligned_cols=42 Identities=14% Similarity=0.218 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 014743 38 QHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQ 79 (419)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (419)
.+..+++++++++.++++++...+......++.+.+++++++
T Consensus 440 le~~kL~~E~~~l~~ei~eL~~iL~s~~~l~~~i~~EL~~lk 481 (493)
T d1ab4a_ 440 LEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVR 481 (493)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 345566667777777766666654444444555555555544
No 350
>d1j5xa_ c.80.1.1 (A:) Hypothetical protein TM0813 {Thermotoga maritima [TaxId: 2336]}
Probab=22.40 E-value=47 Score=29.12 Aligned_cols=97 Identities=13% Similarity=0.156 Sum_probs=46.5
Q ss_pred cccccCcHHHHHHHHHHhhcccCChhHHhhcCCCCCCeEEEEcCCCChHHHHHHHHHh-----ccCCceEEEeCcchhh-
Q 014743 160 YDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAH-----HTDCTFIRVSGSELVQ- 233 (419)
Q Consensus 160 ~~~I~G~~~~~~~l~~~i~~~l~~~~~~~~~gi~~p~~iLL~GPpGtGKT~LakalA~-----~~~~~~i~v~~s~l~~- 233 (419)
|++|--|.+.++.+.+.....+..-+.+..+.......|+|+| +|-|..+-..+. .++.++..+.++++..
T Consensus 4 ~~EI~eqp~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~G---~GsS~~aa~~~~~~~~~~~~~~~~~~~~~e~~~~ 80 (329)
T d1j5xa_ 4 LKEITDQKNELKKFFENFVLNLEKTEIFSEIQKNLTDEVLFVG---CGSSYNLALTISYYFERVLKIRTKAIPAGEVAFQ 80 (329)
T ss_dssp HHHHHHHHHTHHHHHHHTGGGTTC------C----CCEEEEEE---STHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHTT
T ss_pred HHHHHhHHHHHHHHHHHHhcchhhhhhhHHHHhcCCCEEEEEE---echHHHHHHHHHHHHHHhcCCCceEEecchhhcc
Confidence 3445445555555554443334444455555556678899985 677754433332 3466666666665531
Q ss_pred --------------hhhchhHHHHHHHHHHHHhhCCceEEe
Q 014743 234 --------------KYIGEGSRMVRELFVMAREHAPSIIFM 260 (419)
Q Consensus 234 --------------~~~g~~~~~i~~lf~~a~~~~psVl~i 260 (419)
.+-|++...+ +.++.|+.....+|-|
T Consensus 81 ~~~~~~~~~lvI~iS~SG~T~e~i-~a~~~a~~~ga~~i~i 120 (329)
T d1j5xa_ 81 KIPDLEERGLAFLFSRTGNTTEVL-LANDVLKKRNHRTIGI 120 (329)
T ss_dssp CSCCCCSSEEEEEECSSSCCHHHH-HHHHHHHHTTEEEEEE
T ss_pred cccccCCCCeEEEEecCCCChHHH-HHHHhhhhhhhhhhcc
Confidence 1345555544 5567777654333333
No 351
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.23 E-value=96 Score=22.39 Aligned_cols=35 Identities=23% Similarity=0.372 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 014743 40 IHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEE 74 (419)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (419)
+..++.+++.|..+-+.+.........+++.+.+.
T Consensus 3 ~~~L~~El~~L~~~E~~LD~li~~~~~~L~~lted 37 (101)
T d2azeb1 3 LEGLTQDLRQLQESEQQLDHLMNICTTQLRLLSED 37 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 34455555555555555554444445555554443
No 352
>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=21.14 E-value=38 Score=26.34 Aligned_cols=42 Identities=19% Similarity=0.215 Sum_probs=31.5
Q ss_pred HhhcCCCCCCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcc
Q 014743 187 FESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSE 230 (419)
Q Consensus 187 ~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~ 230 (419)
+++.+++++..++++|.-|+|= ++-.+|+..++..+-++.++
T Consensus 20 l~~~~~~~g~~vlI~GaG~vG~--~a~q~ak~~G~~vi~~~~~~ 61 (168)
T d1piwa2 20 LVRNGCGPGKKVGIVGLGGIGS--MGTLISKAMGAETYVISRSS 61 (168)
T ss_dssp HHHTTCSTTCEEEEECCSHHHH--HHHHHHHHHTCEEEEEESSS
T ss_pred HHHhCcCCCCEEEEECCCCcch--hHHHHhhhccccccccccch
Confidence 3456888999999999866773 45567777888888777654
No 353
>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}
Probab=20.66 E-value=48 Score=25.62 Aligned_cols=42 Identities=21% Similarity=0.249 Sum_probs=31.6
Q ss_pred HhhcCCCCCCeEEEEcCCCChHHHHHHHHHhccCCceEEEeCcc
Q 014743 187 FESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSE 230 (419)
Q Consensus 187 ~~~~gi~~p~~iLL~GPpGtGKT~LakalA~~~~~~~i~v~~s~ 230 (419)
+++.+++++..++++|.-|.| +++=.+|+..++..+-++.+.
T Consensus 23 l~~~~~~~G~~VlI~GaG~vG--~~a~qlak~~Ga~~i~~~~~~ 64 (168)
T d1uufa2 23 LRHWQAGPGKKVGVVGIGGLG--HMGIKLAHAMGAHVVAFTTSE 64 (168)
T ss_dssp HHHTTCCTTCEEEEECCSHHH--HHHHHHHHHTTCEEEEEESSG
T ss_pred HHHhCCCCCCEEEEeccchHH--HHHHHHhhcccccchhhccch
Confidence 356678999999999986677 566677888888877666543
No 354
>d2axpa1 c.37.1.1 (A:2-165) Hypothetical protein YorR {Bacillus subtilis [TaxId: 1423]}
Probab=20.48 E-value=95 Score=22.88 Aligned_cols=31 Identities=23% Similarity=0.317 Sum_probs=26.8
Q ss_pred EEEEcCCCChHHHHHHHHHhccCCceEEEeC
Q 014743 198 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 228 (419)
Q Consensus 198 iLL~GPpGtGKT~LakalA~~~~~~~i~v~~ 228 (419)
++|.||--|=|++.|..+..++..+.+.=+.
T Consensus 3 iilegpdccfkstvaaklskelkypiikgss 33 (164)
T d2axpa1 3 IILEGPDCCFKSTVAAKLSKELKYPIIKGSS 33 (164)
T ss_dssp EEEECCSSSCHHHHHHHHHHHHTCCEEECCC
T ss_pred EEEeCCchhhHHHHHHHHHhhhcCceecCch
Confidence 6789999999999999999999998765433
No 355
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=20.43 E-value=1.2e+02 Score=27.10 Aligned_cols=25 Identities=12% Similarity=0.298 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 014743 41 HELQLQVRQKTHNLNRLEAQRNELN 65 (419)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (419)
..++.++..++++++.+..+|+..+
T Consensus 285 ~~le~el~~lee~~~~L~~~w~~ek 309 (387)
T d1qvra2 285 KAIEAEIAKLTEEIAKLRAEWERER 309 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 4455566666666667776666444
No 356
>d1tafa_ a.22.1.3 (A:) TAF(II)42 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=20.38 E-value=1.2e+02 Score=20.31 Aligned_cols=60 Identities=10% Similarity=0.215 Sum_probs=39.2
Q ss_pred HHHHHHhhcccCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHH
Q 014743 341 ILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAK 402 (419)
Q Consensus 341 Il~~~~~~~~~~~~~dl~~la~~t~G~sgadi~~l~~~A~~~a~~~~~~~vt~eD~~~Al~~ 402 (419)
++...++.+++.. .+-.-+.... .|.-+-...++..|..++-..++..|+.+|+.-|++-
T Consensus 6 ~i~~iL~~~GV~~-yeprV~~qlL-ef~yRYtt~VL~DA~vys~HA~k~~id~dDVkLAi~~ 65 (68)
T d1tafa_ 6 VIMSILKELNVQE-YEPRVVNQLL-EFTFRYVTSILDDAKVYANHARKKTIDLDDVRLATEV 65 (68)
T ss_dssp HHHHHHHHTTCCC-BCTHHHHHHH-HHHHHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHH
T ss_pred HHHHHHHHcCCcc-ccHHHHHHHH-HHHHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHh
Confidence 4455566666543 2222222221 2445566678888888888888999999999999874
No 357
>d1rw1a_ c.47.1.12 (A:) Hypothetical protein PA3664 (YffB) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=20.09 E-value=54 Score=23.91 Aligned_cols=30 Identities=17% Similarity=0.151 Sum_probs=26.4
Q ss_pred EEEEcCCCChHHHHHHHHHhccCCceEEEe
Q 014743 198 VLLYGPPGTGKTLLARAVAHHTDCTFIRVS 227 (419)
Q Consensus 198 iLL~GPpGtGKT~LakalA~~~~~~~i~v~ 227 (419)
+.|||-|.|+|+-=|+.+-..-+..|-.++
T Consensus 2 ~~iY~~p~Cs~srka~~~L~~~~i~~~~id 31 (114)
T d1rw1a_ 2 YVLYGIKACDTMKKARTWLDEHKVAYDFHD 31 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEECCCChHHHHHHHHHHHcCCCeEEEE
Confidence 679999999999999999988888877765
Done!