BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014747
(419 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VYB5|AMSH1_ARATH AMSH-like ubiquitin thioesterase 1 OS=Arabidopsis thaliana GN=AMSH1
PE=2 SV=1
Length = 507
Score = 495 bits (1274), Expect = e-139, Method: Compositional matrix adjust.
Identities = 255/414 (61%), Positives = 309/414 (74%), Gaps = 4/414 (0%)
Query: 1 MRSSSEGINIAASAQRLDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSS 60
M SS E I+IA SA+R+ VDNRI+L++Y+RIADNILKQA+IFR EKN+IDLYVMLLRFSS
Sbjct: 1 MGSSFETIDIATSARRIGVDNRISLKFYFRIADNILKQANIFRAEKNVIDLYVMLLRFSS 60
Query: 61 LVTETIPCHRDYLASFKSQKLYLKKKLLNALSELEELQPAVQQKINELNRKKTNQVTGWS 120
L ETIP HRDY S KS K YL+ +LL+ L+ELE+L+P VQQ+I+EL K + +
Sbjct: 61 LALETIPSHRDYRTSLKSNKEYLRMRLLDVLTELEKLKPVVQQRIDELYPKLKPRYNVQA 120
Query: 121 HASQNSTLEWPSLKKQTLTNYDVTKALRLPSRELAYQGSIPQQLAYTRPVDEQFRRMSLN 180
H + N +L W S K + +YD K P Y GS QQ P++E+FR+MS+N
Sbjct: 121 HPA-NGSLGWSSAVKPSFNSYDHAKVRNPPGHNSGYMGSRGQQFLNAAPLEERFRKMSVN 179
Query: 181 FPRPNAETLSRHSLLGPNGLYGHWQPPKSDKLVKYPNNIDLTPIEIPSLRQPSESSIKIK 240
F RPN ETLS+HS+LGP GL WQPPK D V+YP+NID +P+ IPS +Q +S I
Sbjct: 180 F-RPNEETLSKHSILGPGGLSAQWQPPKYDTKVQYPSNIDFSPVVIPSFQQLVDSKPMI- 237
Query: 241 TDSSNVEPEKSSVQSISTPNDEIEIHRTEEPCSMISFETSEAPNSADVIRQPSPPPVLTE 300
T+ SN EPEK V+ N++I+ + TEE SMISFE E+ N ++IRQPSPPPVL E
Sbjct: 238 TNGSNDEPEKPIVEPSVASNEKIQKNYTEELSSMISFEEPESVNENNLIRQPSPPPVLAE 297
Query: 301 VQDLIAAMSPQVTETECQVGNSLSDAFDRSE-PLQLHISTTMMDNFMKLAKSNTDKNLET 359
VQDL+ A+ P+V E EC + NSL D RSE PL+LHI+T+MMD FM+LAKSNT KNLET
Sbjct: 298 VQDLVPALCPEVREPECMIENSLPDESLRSESPLELHIATSMMDTFMRLAKSNTKKNLET 357
Query: 360 CGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKRSLFPLGWIH 413
CGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDK+SLFPLGWIH
Sbjct: 358 CGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKQSLFPLGWIH 411
>sp|Q5PNU3|AMSH3_ARATH AMSH-like ubiquitin thioesterase 3 OS=Arabidopsis thaliana GN=AMSH3
PE=1 SV=2
Length = 507
Score = 324 bits (830), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 183/414 (44%), Positives = 257/414 (62%), Gaps = 13/414 (3%)
Query: 8 INIAASAQRLDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIP 67
I++ A+ ++VDNRI LR YYRIADN+L+QA I+REEKN++DLY+MLLR+SSL++ETIP
Sbjct: 3 IDLNKVAREIEVDNRIPLRNYYRIADNLLRQASIYREEKNVVDLYIMLLRYSSLISETIP 62
Query: 68 CHRDYLASFKSQKLYLKKKLLNALSELEELQPAVQQKINELNRKKTNQVTGWSH----AS 123
HRDY AS ++L +K+L ++ELE L+P Q +++LNR + S +
Sbjct: 63 FHRDYQASLPQERLGSRKRLRAVINELESLKPEFNQLVDKLNRVEDESRQDGSDLPVVSY 122
Query: 124 QNSTLEWPSLKKQTLTNYDVTKALRLPSRELAYQGSIPQQLAYTRPVDEQFRRMSLNFPR 183
+ +EWP K + + D+ K L Y ++ T+ +D+QF+++S +F
Sbjct: 123 SSDAVEWPPAHKASYSRPDINKPLPTSQPSWTYNNNLTSSSNRTQ-IDQQFQKLSFDFLP 181
Query: 184 PNAETLSRHSLLGPNGLYGHWQPPKSDKLVKYPNNIDLTPIEIPSLRQ--PSESSIKIKT 241
PN TLSRHS LGPNGL PKS+ V+YP+N D + L + PS SS +
Sbjct: 182 PNQATLSRHSFLGPNGLKRQMVAPKSEIKVQYPSNTDWGSADNSGLIEAGPSSSSASLNG 241
Query: 242 DSSNVEPEKSSVQSISTPNDEIEIHRTEEPCSMISFETSEAPNSADVIRQPSPPPVLTEV 301
DS V S++ S+ + +D +E S + +E P ++QPSPPPVL +V
Sbjct: 242 DSQEV----STLNSVLSLDDGRWQRHSEAVNSQFISDATEDPFQFVGMKQPSPPPVLAQV 297
Query: 302 QDLIAAMSP-QVTETECQVGNSLSDAFDRSEPLQ-LHISTTMMDNFMKLAKSNTDKNLET 359
+A + P +V + + + S Q LH+ +MD+F++LA+SNT++NLET
Sbjct: 298 HQELAQICPSKVADPRPGPAIPSLEGKEGSNSYQHLHVPVRIMDDFLRLARSNTERNLET 357
Query: 360 CGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKRSLFPLGWIH 413
CG+LAGSLKNR F+IT LIIPKQESTSDSCQ NEEEIFEVQD+ SLFPLGWIH
Sbjct: 358 CGVLAGSLKNRVFHITTLIIPKQESTSDSCQTLNEEEIFEVQDRLSLFPLGWIH 411
>sp|Q6NKP9|AMSH2_ARATH AMSH-like ubiquitin thioesterase 2 OS=Arabidopsis thaliana GN=AMSH2
PE=2 SV=1
Length = 223
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 64/79 (81%)
Query: 335 LHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNE 394
+HIS ++++F +LA+ NT+K+LETCG LA L+ FY+T LIIPKQESTS+SCQA NE
Sbjct: 49 VHISERLLEDFTELARENTEKDLETCGTLAAFLERGIFYVTTLIIPKQESTSNSCQAMNE 108
Query: 395 EEIFEVQDKRSLFPLGWIH 413
E+F +Q++R L+P+GWIH
Sbjct: 109 VEVFSIQNERELYPVGWIH 127
>sp|Q96FJ0|STALP_HUMAN AMSH-like protease OS=Homo sapiens GN=STAMBPL1 PE=1 SV=2
Length = 436
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 169/410 (41%), Gaps = 96/410 (23%)
Query: 4 SSEGINIAASAQRLDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVT 63
S G NI S I R Y+R + + A ++ EE N+ + +V+ +F +L
Sbjct: 34 SKLGCNITISED-------ITPRRYFRSGVEMERMASVYLEEGNLENAFVLYNKFITLFV 86
Query: 64 ETIPCHRDYLASFKSQKLYLKKKLLNALSELEELQPAVQQKINELNRKKTNQVTGWSHAS 123
E +P HRDY A+ E ++ + +K+ E+ +T++
Sbjct: 87 EKLPNHRDYQQC--------------AVPEKQD----IMKKLKEIAFPRTDE-------- 120
Query: 124 QNSTLEWPSLKKQTLTNYDVTKALRLPSRELAYQGSIPQQLAYTRPVDEQFRRMSLNFPR 183
LK L Y+V L S+ Y+ I ++L + R ++ + +R++
Sbjct: 121 ---------LKNDLLKKYNVEYQEYLQSKN-KYKAEILKKLEHQRLIEAERKRIA----- 165
Query: 184 PNAETLSRHSLLGPNGLYGHWQPPKSDKLVKYPNNIDLTPIEIPSLRQPSESSIKIKTDS 243
Q +S++ + + + + + +R S + + D
Sbjct: 166 -----------------QMRQQQLESEQFLFFEDQLKKQELARGQMRSQQTSGLSEQIDG 208
Query: 244 SNVEPEKSSVQSISTPNDEIEIHRTEEPCSMISFETSEAPNSADVIRQPSPPPVLTEVQD 303
S + S S N + + ++P S T+ A +S V R +P L+ VQ+
Sbjct: 209 SAL-----SCFSTHQNNSLLNVF-ADQPNK--SDATNYASHSPPVNRALTPAATLSAVQN 260
Query: 304 LIAAMSPQVTETECQVGNSLSDAFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGIL 363
L+ V C V + + F++LA+SNT + +ETCGIL
Sbjct: 261 LV------VEGLRCVV-----------------LPEDLCHKFLQLAESNTVRGIETCGIL 297
Query: 364 AGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKRSLFPLGWIH 413
G L + +F IT +I+PKQ + D C N EE+F VQD+ L LGWIH
Sbjct: 298 CGKLTHNEFTITHVIVPKQSAGPDYCDMENVEELFNVQDQHDLLTLGWIH 347
>sp|Q5R558|STALP_PONAB AMSH-like protease OS=Pongo abelii GN=STAMBPL1 PE=2 SV=1
Length = 436
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 163/388 (42%), Gaps = 89/388 (22%)
Query: 26 RYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDYLASFKSQKLYLKK 85
R Y+R + + A ++ EE N+ + +V+ +F +L E +P HRDY
Sbjct: 49 RRYFRSGVEMERMASVYLEEGNLENAFVLYNKFITLFVEKLPNHRDYQQC---------- 98
Query: 86 KLLNALSELEELQPAVQQKINELNRKKTNQVTGWSHASQNSTLEWPSLKKQTLTNYDVTK 145
A+ E ++ + +K+ E+ +T++ LK L Y+V
Sbjct: 99 ----AVPEKQD----IMKKLKEIAFPRTDE-----------------LKNDLLKKYNVEY 133
Query: 146 ALRLPSRELAYQGSIPQQLAYTRPVDEQFRRMSLNFPRPNAETLSRHSLLGPNGLYGHWQ 205
L S+ Y+ I ++L + R ++ + +R++ Q
Sbjct: 134 QEYLQSKN-QYKAEILKKLEHQRLIEAERKRIA----------------------QMRQQ 170
Query: 206 PPKSDKLVKYPNNIDLTPIEIPSLRQPSESSIKIKTDSSNVEPEKSSVQSISTPNDEIEI 265
+S++ + + + + + +R S + + D S + S S N + +
Sbjct: 171 QLESEQFLFFEDQLKKQELARGQMRSQQTSGLSEQIDGSAL-----SCFSTHQNNSLLNV 225
Query: 266 HRTEEPCSMISFETSEAPNSADVIRQPSPPPVLTEVQDLIAAMSPQVTETECQVGNSLSD 325
++P S T+ A +S V R +P L+ VQ+L+ V C V
Sbjct: 226 F-ADQPNK--SDATNYASHSPPVNRALTPAATLSAVQNLV------VEGLRCVV------ 270
Query: 326 AFDRSEPLQLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQEST 385
+ + F++LA+SNT + +ETCGIL G L + +F IT +I+PKQ +
Sbjct: 271 -----------LPKDLCHKFLQLAESNTVRGIETCGILCGKLTHNEFTITHVIVPKQSAG 319
Query: 386 SDSCQATNEEEIFEVQDKRSLFPLGWIH 413
D C N EE+F VQD+ L LGWIH
Sbjct: 320 PDYCDVENVEELFNVQDQHDLLTLGWIH 347
>sp|Q9P371|SST2_SCHPO AMSH-like protease sst2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=sst2 PE=1 SV=1
Length = 435
Score = 94.4 bits (233), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 50/69 (72%)
Query: 345 FMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKR 404
F+ + K NT KNLETCGIL G L+ F+IT L+IP QE+TSD+C T+E +FE QDK
Sbjct: 273 FLDVVKPNTKKNLETCGILCGKLRQNAFFITHLVIPLQEATSDTCGTTDEASLFEFQDKH 332
Query: 405 SLFPLGWIH 413
+L LGWIH
Sbjct: 333 NLLTLGWIH 341
Score = 41.6 bits (96), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 6/107 (5%)
Query: 10 IAASAQRLDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPC- 68
IA+ A D + I L+ + R + I KQA ++ E + + +L R+ L + C
Sbjct: 16 IASRAGAFDFNKNIPLKNWLRTSTTISKQAHVYVSEHDYSNGVFLLFRYCELFMK---CQ 72
Query: 69 -HRDYLASFKSQKLYLKKKLLNALSELEELQPAVQQKINELNRKKTN 114
H D A++K + + + NAL E+E ++P V+++ + +K +
Sbjct: 73 KHPD-AAAYKKELFDYYQGVRNALEEIELIKPIVKEQYEQYQCQKND 118
>sp|Q54Q40|D1039_DICDI Probable ubiquitin thioesterase DG1039 OS=Dictyostelium discoideum
GN=DG1039 PE=3 SV=1
Length = 715
Score = 92.0 bits (227), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 306 AAMSPQVTETECQVGNSLSDAFDRSEPL-QLHISTTMMDNFMKLAKSNTDKNLETCGILA 364
A +P +T T + S+A + L ++ + + FM+LA++NT +++ETCGIL+
Sbjct: 507 AVNTPSITPTTNKPNIDSSEASKKYSKLRKIIVHGEVFQEFMRLAENNTKRSIETCGILS 566
Query: 365 GSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKRSLFPLGWIHV 414
G+L N F IT +IIPKQE T+D+C E EIFE Q + L LGWIH
Sbjct: 567 GTLSNDVFRITTIIIPKQEGTTDTCNTIEEHEIFEYQLENDLLTLGWIHT 616
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 10 IAASAQRLDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCH 69
+ + ++VD ++ +Y +N++KQADI++ E +I Y+ LRF L+ E + H
Sbjct: 17 VKKHVEGVEVDKNYSIFHYLSTCNNLVKQADIYKSEGDIERTYIYSLRFCILIFEKLQKH 76
Query: 70 RDY-LASFKSQKLYLKKKLLNALSELEELQPAVQQ 103
D+ SF + +K+K L ELE L+ +++
Sbjct: 77 PDFNKESFTKSRNEIKRKAELKLKELEGLKETLKK 111
>sp|Q6TH47|STBPA_DANRE STAM-binding protein-like A OS=Danio rerio GN=stambpa PE=2 SV=3
Length = 418
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 50/80 (62%)
Query: 334 QLHISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATN 393
QL + + F+KLA++NT + +ETCGIL G L F +T +I+PKQ D C N
Sbjct: 250 QLFVPAELCQRFLKLAETNTARAVETCGILCGKLMKNAFTVTHVIVPKQCGGPDYCDTEN 309
Query: 394 EEEIFEVQDKRSLFPLGWIH 413
EEE+F +QD+ L LGWIH
Sbjct: 310 EEELFLIQDQNDLITLGWIH 329
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 17 LDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDY-LAS 75
+DV + R Y+R I++ A+I+ +E N+ +++ ++ +L E +P HR+Y A+
Sbjct: 25 VDVSEDVPPRRYFRSGMEIIRMANIYADEGNVEHAFILYNKYITLFIEKLPKHREYKTAN 84
Query: 76 FKSQKLYLKKKLLNALSELEELQ 98
+K ++K A + EEL+
Sbjct: 85 IPEKKETMRKLKEIAFPKAEELK 107
>sp|O95630|STABP_HUMAN STAM-binding protein OS=Homo sapiens GN=STAMBP PE=1 SV=1
Length = 424
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 49/69 (71%)
Query: 345 FMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKR 404
F++LA +NT + +ETCGIL G L +F IT ++IPKQ + SD C NEEE+F +QD++
Sbjct: 267 FLQLASANTARGVETCGILCGKLMRNEFTITHVLIPKQSAGSDYCNTENEEELFLIQDQQ 326
Query: 405 SLFPLGWIH 413
L LGWIH
Sbjct: 327 GLITLGWIH 335
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 8/105 (7%)
Query: 17 LDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDYLASF 76
++V+ I R Y+R I++ A I+ EE NI +++ ++ +L E +P HRDY ++
Sbjct: 25 VEVNEDIPPRRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKLPKHRDYKSAV 84
Query: 77 KSQKLYLKKKLLN-ALSELEELQPAVQQKINELNRKKTNQVTGWS 120
+K KKL A + EEL+ EL ++ T + T ++
Sbjct: 85 IPEKKDTVKKLKEIAFPKAEELK-------AELLKRYTKEYTEYN 122
>sp|Q76N33|STALP_MOUSE AMSH-like protease OS=Mus musculus GN=Stambpl1 PE=2 SV=1
Length = 436
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 49/77 (63%)
Query: 337 ISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEE 396
+S + F+ LA SNT + +ETCGIL G L + +F IT +++PKQ + D C N EE
Sbjct: 271 LSRDLCHKFLLLADSNTVRGIETCGILCGKLTHNEFTITHVVVPKQSAGPDYCDVENVEE 330
Query: 397 IFEVQDKRSLFPLGWIH 413
+F VQD+ L LGWIH
Sbjct: 331 LFNVQDQHGLLTLGWIH 347
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 17 LDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDYLASF 76
+ ++ I R Y+R + + A ++ EE N+ + +V+ +F +L E +P HRDY
Sbjct: 40 ISINEDITPRRYFRSGVEMERMASVYLEEGNLENAFVLYNKFITLFVEKLPSHRDYQQCA 99
Query: 77 KSQKLYLKKKLLN-ALSELEELQPAVQQKIN 106
+K + KKL A +EL+ + +K N
Sbjct: 100 VPEKQDIMKKLKEIAFPRTDELKTDLLRKYN 130
>sp|Q9CQ26|STABP_MOUSE STAM-binding protein OS=Mus musculus GN=Stambp PE=2 SV=1
Length = 424
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%)
Query: 337 ISTTMMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEE 396
+ + F++LA +NT K +ETCG+L G L +F IT ++IP+Q D C NEEE
Sbjct: 259 VPRNLCSEFLQLASANTAKGIETCGVLCGKLMRNEFTITHVLIPRQNGGPDYCHTENEEE 318
Query: 397 IFEVQDKRSLFPLGWIH 413
IF +QD L LGWIH
Sbjct: 319 IFFMQDDLGLLTLGWIH 335
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 12 ASAQRLDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRD 71
SA L+ D I R YYR I++ A ++ EE NI +++ ++ +L E +P HRD
Sbjct: 22 GSAVELNED--IPPRRYYRSGVEIIRMASVYSEEGNIEHAFILYNKYITLFIEKLPKHRD 79
Query: 72 YLASFKSQKLYLKKKLLN-ALSELEELQPAVQQKINELNRKKTNQ 115
Y ++ +K KKL + A + EEL+ EL R+ T +
Sbjct: 80 YKSAIIPEKKDAVKKLKSVAFPKAEELK-------TELLRRYTKE 117
>sp|Q8R424|STABP_RAT STAM-binding protein OS=Rattus norvegicus GN=Stambp PE=2 SV=1
Length = 424
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 46/73 (63%)
Query: 341 MMDNFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEV 400
+ F++LA +NT K +ETCG+L G L +F IT ++IP+Q D C NEEEIF +
Sbjct: 263 LCSEFLQLASANTAKGIETCGVLCGKLMRNEFTITHVLIPRQNGGPDYCHTENEEEIFFM 322
Query: 401 QDKRSLFPLGWIH 413
QD L LGWIH
Sbjct: 323 QDDLGLLTLGWIH 335
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 12 ASAQRLDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRD 71
SA L+ D I R Y+R I++ A I+ EE NI +++ ++ +L E +P HRD
Sbjct: 22 GSAVELNED--IPPRRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKLPKHRD 79
Query: 72 YLASFKSQKLYLKKKLLN-ALSELEELQ 98
Y ++ +K KKL N A + EEL+
Sbjct: 80 YKSAIIPEKKDAVKKLKNVAFPKAEELK 107
>sp|Q63ZM7|STABP_XENLA STAM-binding protein-like OS=Xenopus laevis GN=stambp PE=2 SV=1
Length = 416
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 48/69 (69%)
Query: 345 FMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKR 404
F++L+++NT + +ETCGIL G L +F +T +I+PKQ D C +EEE+F +QD++
Sbjct: 259 FLQLSENNTQRGVETCGILCGKLLQNEFTVTHVIVPKQSGGPDYCNTESEEELFLIQDQQ 318
Query: 405 SLFPLGWIH 413
L LGWIH
Sbjct: 319 GLITLGWIH 327
Score = 40.4 bits (93), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 35/56 (62%)
Query: 17 LDVDNRIALRYYYRIADNILKQADIFREEKNIIDLYVMLLRFSSLVTETIPCHRDY 72
++V++ I + YYR +++ A+++ E +I + +++ ++ +L E +P HRDY
Sbjct: 25 VEVNDDIPPKRYYRSGVELIRMANVYSGEGSIENAFILYNKYITLFIEKLPKHRDY 80
>sp|O88799|ZAN_MOUSE Zonadhesin OS=Mus musculus GN=Zan PE=2 SV=1
Length = 5376
Score = 33.1 bits (74), Expect = 4.3, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 8/118 (6%)
Query: 225 EIPSLRQPSESSIKIKTDSSNVEPEKSSV---QSISTPNDEIEIHRTEEPCSMISFETSE 281
E+P++ P+E + + T+ +NV PE++SV ++IST + T P + + T
Sbjct: 777 EVPTV--PTEVT-GVHTEVTNVSPEETSVPTEETISTEVTTVSPEETTLPTEVPTVSTEV 833
Query: 282 APNSADVIRQPSPPPVLTEVQDLIAAMSPQVTETECQVGNSLSDAFDRSEPLQLHIST 339
S + P +LT + + + +VT +V N + + S P + IST
Sbjct: 834 TNVSPEETSVPPEETILTTLYTEVPTVPTEVTGVHTEVTNVSPE--ETSVPTEETIST 889
>sp|C0LGT5|Y5169_ARATH Probable LRR receptor-like serine/threonine-protein kinase
At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1
Length = 866
Score = 32.3 bits (72), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 37/57 (64%), Gaps = 5/57 (8%)
Query: 208 KSDKLVKYPNNID---LTPIEIPSLRQPSESSIKIKTDSSNVEPEKSSVQSISTPND 261
+SD+L++YP+++ +P +P Q + +S+ + +S+N EP K+++ S +TP D
Sbjct: 196 QSDRLIRYPDDVYDRVWSPFFLPEWTQIT-TSLDVN-NSNNYEPPKAALTSAATPGD 250
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.129 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 144,185,940
Number of Sequences: 539616
Number of extensions: 5889597
Number of successful extensions: 14587
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 14518
Number of HSP's gapped (non-prelim): 114
length of query: 419
length of database: 191,569,459
effective HSP length: 120
effective length of query: 299
effective length of database: 126,815,539
effective search space: 37917846161
effective search space used: 37917846161
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)