Your job contains 1 sequence.
>014748
MMMGLMLHANAKSLIKRHMYKDALEVLTMGEEAFSLCDPKVLEFVDNGPLLQIDMVWCYF
MLRDISWLSEAGIRLRKAREGIERAHGKDSSRVRLLQAGRHPELALHLRMELLEGVAAYH
SGQFDKARNALTSAQAKFFQLQVPDESLSLVMSMGFKEQDAKRALRICSQDVGSAIDFLV
EEKAKRVKEREDNEQRRKEIMEQKRYGLTPLKKAVDIEKIKELVSIGFEKELVAEALRRN
ENDSQKALDDLTNPESNSAIQLYIESRKRKRCRQAADAKIEQLVAMGFERPRVIEACRAG
GDDIHQIMLQLLGEPGSNPTAAANNNASTSISMPNNGEPSSSINNENVEGDPDSSFEETS
ATEDVNGRDVEMEDELANDLTGDVFADYDIEVTKEGEAISEYLSLLDSVAGIAIEKARN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014748
(419 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2060754 - symbol:NUB1 "homolog of human NUB1" ... 1077 5.5e-109 1
FB|FBgn0031161 - symbol:CG15445 species:7227 "Drosophila ... 306 1.9e-26 1
ZFIN|ZDB-GENE-060929-724 - symbol:zgc:153057 "zgc:153057"... 291 6.4e-25 1
UNIPROTKB|Q9Y5A7 - symbol:NUB1 "NEDD8 ultimate buster 1" ... 260 1.0e-22 2
UNIPROTKB|F1SSM7 - symbol:NUB1 "Uncharacterized protein" ... 278 2.0e-22 1
UNIPROTKB|E1BZ00 - symbol:NUB1 "Uncharacterized protein" ... 274 9.5e-22 1
ZFIN|ZDB-GENE-080212-11 - symbol:nub1 "negative regulator... 272 1.6e-21 1
UNIPROTKB|Q05B69 - symbol:NUB1 "Negative regulator of ubi... 270 3.4e-21 1
MGI|MGI:1889001 - symbol:Nub1 "negative regulator of ubiq... 269 4.5e-21 1
RGD|1359489 - symbol:Nub1 "negative regulator of ubiquiti... 262 3.4e-20 1
UNIPROTKB|Q8MJ87 - symbol:NUB1 "NEDD8 ultimate buster 1" ... 110 0.00083 1
>TAIR|locus:2060754 [details] [associations]
symbol:NUB1 "homolog of human NUB1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR000449 InterPro:IPR000626 InterPro:IPR009060
Pfam:PF00240 Pfam:PF00627 SMART:SM00213 EMBL:CP002685
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR019955
PROSITE:PS50053 SUPFAM:SSF46934 EMBL:BT022114 IPI:IPI00526432
RefSeq:NP_178939.2 UniGene:At.50074 ProteinModelPortal:Q500V3
SMR:Q500V3 PRIDE:Q500V3 EnsemblPlants:AT2G12550.1 GeneID:815729
KEGG:ath:AT2G12550 TAIR:At2g12550 InParanoid:Q500V3 OMA:LEDQSGQ
PhylomeDB:Q500V3 ProtClustDB:CLSN2681145 Genevestigator:Q500V3
Uniprot:Q500V3
Length = 562
Score = 1077 (384.2 bits), Expect = 5.5e-109, P = 5.5e-109
Identities = 225/420 (53%), Positives = 291/420 (69%)
Query: 2 MMGLMLHANAKSLIKRHMYKDALEVLTMGEEAFSLCDPKVLEFVDNGPLLQIDMVWCYFM 61
MMGLMLH AKSLI+ MY DA+EVL M EE+F LCDPK+LE VDN P+++ID+VWCYF+
Sbjct: 143 MMGLMLHTKAKSLIEIEMYSDAVEVLAMAEESFLLCDPKILELVDNLPMMEIDIVWCYFL 202
Query: 62 LRDISWLSEAGIRLRKAREGIERAHGKDSSRVRLLQAGRHPELALHLRMELLEGVAAYHS 121
LRDI LS+AG+RL +AR+G+ERAHGKD SRVRLLQAG+ PE+A++LR+ELLEGV AYH+
Sbjct: 203 LRDIKCLSDAGVRLVRARKGLERAHGKDLSRVRLLQAGQSPEMAIYLRLELLEGVVAYHT 262
Query: 122 GQFDKARNALTSAQAKFFQLQVPDESLSLVMSMGFKEQDAKRALRICSQDVGSAIDFLXX 181
GQ DKA NAL SA AKF QLQ+PDE+LSLVM MGF+E+DAKRALR+ +QD+ S++DFL
Sbjct: 263 GQNDKALNALKSAHAKFLQLQIPDETLSLVMGMGFQEKDAKRALRLNNQDIASSVDFLIE 322
Query: 182 XXXXXXXXXXDNEQRRKEIMEQKRYGLTPLKKAVDIEKIKELVSIGFEKELVAEALRRNE 241
+ QR+ EI+EQK+YG+TP+KKAVD++ ++ LVSIG+ +EL AE+LRRNE
Sbjct: 323 ERAKKAQKREQDLQRQSEILEQKKYGVTPMKKAVDMQMLERLVSIGYARELAAESLRRNE 382
Query: 242 NDSQKALDDLTNPESNSAIQLYIESRKRKRCRQAADAKIEQLVAMGFERPRVIEACRAGG 301
ND QKALD LT+P+ NS IQ YIESRKRKR Q + +LV+MGFER + A AGG
Sbjct: 383 NDIQKALDILTDPKVNSTIQAYIESRKRKRQEQLVGISVAELVSMGFERGKATSALEAGG 442
Query: 302 ---DDIHQIMLQLLGEPGXXXXXXXXXXXXXXXXMPNNGEPSSSINNENVEGDPDSSFEE 358
D I +++ + PG N G SS E D + E
Sbjct: 443 SREDTIQRLLSASVANPGTTTTSVINATSSTN----NVGAESSGFGG-GAEQDSEMKDET 497
Query: 359 TS-----ATEDVNG----RDVEMEDELANDLTG-DVFADYDIEVTKEGEAISEYLSLLDS 408
T A+ +G RD E+EDE+A+++ D + YDI + KE EAI+EYL++LD+
Sbjct: 498 TDDIANRASTSSDGMEEERDSEIEDEIADEIARVDALSAYDINLDKEIEAINEYLAMLDA 557
>FB|FBgn0031161 [details] [associations]
symbol:CG15445 species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR000449
InterPro:IPR009060 Pfam:PF00627 GO:GO:0022008 EMBL:AE014298
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 SUPFAM:SSF46934
UniGene:Dm.11638 GeneID:33094 KEGG:dme:Dmel_CG15445
FlyBase:FBgn0031161 ChiTaRS:CG15445 GenomeRNAi:33094 NextBio:781883
RefSeq:NP_608436.3 ProteinModelPortal:Q7KU54 SMR:Q7KU54
PRIDE:Q7KU54 UCSC:CG15445-RD InParanoid:Q7KU54 OMA:WEEPYYS
PhylomeDB:Q7KU54 ArrayExpress:Q7KU54 Bgee:Q7KU54 Uniprot:Q7KU54
Length = 646
Score = 306 (112.8 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 102/415 (24%), Positives = 188/415 (45%)
Query: 1 MMMGLMLHANAKSLIKRHMYKDALEVLTMGEEAFSLCDPKVLEFVDNGPLLQIDMVWCYF 60
++MGL A++ + R +++AL +L +E FS C K LE VDN LL +D+VWCYF
Sbjct: 239 LLMGLGFCEKARAAMNRKHFEEALLLLLEADEHFSTCGSKFLESVDNYALLNLDIVWCYF 298
Query: 61 MLRDISWLSEAGIRLRKAREGIERAHGKDSSRVRLLQAGRHPELALHLRMELLEGVAAYH 120
L++++ L +A RL + ++G + R+ L+ PE AL +R++LL+GV +H
Sbjct: 299 CLKNVTQLPDAEHRLARCSRNFGISYGDNLERLYSLKGKDCPERALIMRLKLLQGVIFFH 358
Query: 121 SGQFDKARNALTSAQAKFFQLQVPDESLSLVMSMGFKEQDAKRALRICSQD--VGSAIDF 178
++A +A+ +L++ ++ L+L++ MGF+ +A+ ALR C V A+ F
Sbjct: 359 QNLRNQAFECFEAAKTLLNELKINNDQLALLVDMGFEPSEARMALRSCKGGTAVEQAVQF 418
Query: 179 LXXXXXXXXXXXXDNEQRRKEIMEQKRYGLTPLKKA--VDIEKIKELVSIGFEKELVAEA 236
+ + + E ++R + K V+ + L +GFE L A
Sbjct: 419 IHERRQQLKNARM--KYKASERAMERRLKRSNSKDCTWVNPRSVCSLADMGFESGLATIA 476
Query: 237 LRRNENDSQKALDDLTNPESNSAIQLYIESRKRKRCRQAADAKIEQLVAMGFERPRVIEA 296
L+R+ ND +A++ L ES+ + K+ QL+ +GF A
Sbjct: 477 LQRSNNDILQAVE-LLQTESDE-----LTGASPWFPVTVDTTKLAQLLQLGFNENDSRVA 530
Query: 297 CRAGGDDIHQIMLQLLGEPGXXXXXXXXXXXXXXXXMPNNGEPSSSINNENVEGDPDSSF 356
+ +++ + + L+ N G+ + N G +
Sbjct: 531 LQNASNNMEEAIESLMCAIESEEELKAILKHVGRLA-ENGGQNLDGPSTSNASGQTQVAL 589
Query: 357 EETSATEDVNGRDVEMEDELAND-LTGDV-FAD--Y-DIEVTKEGEAISEYLSLL 406
+N VE+E A + D+ +D Y D+ + +E + ++EY ++L
Sbjct: 590 PAPIIEAVINHARVEIETYKAYERFNSDLKLSDLEYLDLPLIQEEKILTEYFNML 644
>ZFIN|ZDB-GENE-060929-724 [details] [associations]
symbol:zgc:153057 "zgc:153057" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR000449 InterPro:IPR009060 Pfam:PF00627
ZFIN:ZDB-GENE-060929-724 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 SUPFAM:SSF46934 HOVERGEN:HBG045600 UniGene:Dr.13838
EMBL:BC124231 IPI:IPI00806463 RefSeq:NP_001070233.1
ProteinModelPortal:Q08CI0 PRIDE:Q08CI0 GeneID:767798
KEGG:dre:767798 NextBio:20918177 Uniprot:Q08CI0
Length = 593
Score = 291 (107.5 bits), Expect = 6.4e-25, P = 6.4e-25
Identities = 71/247 (28%), Positives = 122/247 (49%)
Query: 1 MMMGLMLHANAKSLIKRHMYKDALEVLTMGEEAFSLCDPKVLEFVDNGPLLQIDMVWCYF 60
+++ + H ++L+K+ + AL L +E F+ C+ +L VDN +LQ+DMVWCY
Sbjct: 236 LILAMGFHEKGRALMKKRDHSAALPYLVHADEQFNKCNSAILHTVDNYAVLQLDMVWCYQ 295
Query: 61 MLRDISWLSEAGIRLRKAREGIERAHGKDSSRVRLLQAGRHPELALHLRMELLEGVAAYH 120
L + L +A RL KA + R +GK+ SR++ ++ E L LR+ LL+ V Y
Sbjct: 296 ALEQMQCLDDAWERLGKAEQCFNRCYGKERSRLQQIKGHTGGEEVLFLRLHLLQTVLMYV 355
Query: 121 SGQFDKARNALTSAQAKFFQLQVPDESLSLVMSMGFKEQDAKRALRICSQDVGSAIDFLX 180
G + A++ L + ++ QL + + L + GF EQ+A+ LR C DV A +
Sbjct: 356 KGHKNTAQDKLRDVEHRYSQLNLDPQKLQQLQDKGFSEQEARLGLRACRGDVSEAEKLIL 415
Query: 181 XXXXXXXXXXXDNEQRRKEIMEQKRYGLTPLKKAVDIEKIKELVSIGFEKELVAEALRRN 240
++ K++++ K K+ ++ I LV +GF++ AL +
Sbjct: 416 ------------QRKKEKQVLKLKEQD----KRRRRLQDINTLVELGFKRRDAQRALHQA 459
Query: 241 ENDSQKA 247
D KA
Sbjct: 460 RGDVDKA 466
>UNIPROTKB|Q9Y5A7 [details] [associations]
symbol:NUB1 "NEDD8 ultimate buster 1" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IEA] [GO:0034612 "response
to tumor necrosis factor" evidence=IEP] [GO:0034341 "response to
interferon-gamma" evidence=IEP] [GO:0016567 "protein
ubiquitination" evidence=IMP] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000449 InterPro:IPR009060 Pfam:PF00627 GO:GO:0005634
GO:GO:0016567 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
GO:GO:0034612 GO:GO:0006511 GO:GO:0032436 SUPFAM:SSF46934
GO:GO:0034341 eggNOG:NOG302480 EMBL:AF155099 EMBL:AF300717
EMBL:AF459743 EMBL:AY129295 EMBL:AC005486 EMBL:BC046354
EMBL:AF108083 IPI:IPI00157365 IPI:IPI00377271 RefSeq:NP_001230280.1
RefSeq:NP_057202.3 UniGene:Hs.647082 PDB:1WJU PDBsum:1WJU
ProteinModelPortal:Q9Y5A7 SMR:Q9Y5A7 IntAct:Q9Y5A7 MINT:MINT-268296
STRING:Q9Y5A7 PhosphoSite:Q9Y5A7 DMDM:37154888 PaxDb:Q9Y5A7
PRIDE:Q9Y5A7 Ensembl:ENST00000355851 Ensembl:ENST00000566856
GeneID:51667 KEGG:hsa:51667 UCSC:uc003wjw.3 UCSC:uc003wjx.3
CTD:51667 GeneCards:GC07P151038 H-InvDB:HIX0019486 HGNC:HGNC:17623
MIM:607981 neXtProt:NX_Q9Y5A7 PharmGKB:PA147357533
HOGENOM:HOG000113882 HOVERGEN:HBG045600 InParanoid:Q9Y5A7
OMA:MWWLNDS PhylomeDB:Q9Y5A7 ChiTaRS:NUB1 EvolutionaryTrace:Q9Y5A7
GenomeRNAi:51667 NextBio:55660 ArrayExpress:Q9Y5A7 Bgee:Q9Y5A7
CleanEx:HS_NUB1 Genevestigator:Q9Y5A7 GermOnline:ENSG00000013374
Uniprot:Q9Y5A7
Length = 615
Score = 260 (96.6 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 72/256 (28%), Positives = 122/256 (47%)
Query: 1 MMMGLMLHANAKSLIKRHMYKDALEVLTMGEEAFSLCDPKVLEFVDNGPLLQIDMVWCYF 60
+M+ + H ++ +KR Y AL L ++ F C ++L+ VDN +LQ+D+VWCYF
Sbjct: 233 LMLAMGYHEKGRAFLKRKEYGIALPCLLDADKYFCECCRELLDTVDNYAVLQLDIVWCYF 292
Query: 61 MLRDISWLSEAGIRLRKAREGIERAHGKDSSRVRLLQAGRHPELALHLRMELLEGVAAYH 120
L + L +A +L A++ + +G++ R+ ++ E L LR+ LL+G+ YH
Sbjct: 293 RLEQLECLDDAEKKLNLAQKCFKNCYGENHQRLVHIKGNCGKEKVLFLRLYLLQGIRNYH 352
Query: 121 SGQFDKARNALTSAQAKFFQLQVPDESLSLVMSMGFKEQDAKRALRICSQDVGSAIDFLX 180
SG +A L A+ F +L + + ++ +GF Q+A+ LR C +V A +
Sbjct: 353 SGNDVEAYEYLNKARQLFKELYIDPSKVDNLLQLGFTAQEARLGLRACDGNVDHAATHIT 412
Query: 181 XXXXXXXXXXXDNEQRRKEIMEQKRYGLTPLKKAVDIEKIKELVSIGFEKELVAEALRRN 240
Q RKE E+KR L E I+ L +G+ + L
Sbjct: 413 NRREELA-------QIRKEEKEKKRRRL---------ENIRFLKGMGYSTHAAQQVLHAA 456
Query: 241 ENDSQKALDDL-TNPE 255
+ +AL L +NP+
Sbjct: 457 SGNLDEALKILLSNPQ 472
Score = 64 (27.6 bits), Expect = 1.0e-22, Sum P(2) = 1.0e-22
Identities = 23/81 (28%), Positives = 41/81 (50%)
Query: 335 NNGE--PSSSINNENVEGDPDSSFEETSATEDVNGRDVEMEDELANDLTGDV---FADYD 389
N G P ++ E+ P +S +++ T + D +ME E N++ D+ DY
Sbjct: 529 NGGSLPPELPLSPEDSLSPPATSPSDSAGTSSAS-TDEDMETEAVNEILEDIPEHEEDY- 586
Query: 390 IEVTKEGEAI--SEYLSLLDS 408
++ T E E I +EYLS +++
Sbjct: 587 LDSTLEDEEIIIAEYLSYVEN 607
>UNIPROTKB|F1SSM7 [details] [associations]
symbol:NUB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0034612 "response to tumor necrosis factor"
evidence=IEA] [GO:0034341 "response to interferon-gamma"
evidence=IEA] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR000449 InterPro:IPR009060 Pfam:PF00627 GO:GO:0016567
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 GO:GO:0034612
GO:GO:0006511 GO:GO:0032436 SUPFAM:SSF46934 GO:GO:0034341
OMA:MWWLNDS GeneTree:ENSGT00390000010557 EMBL:FP102583
Ensembl:ENSSSCT00000017899 Uniprot:F1SSM7
Length = 563
Score = 278 (102.9 bits), Expect = 2.0e-22, P = 2.0e-22
Identities = 74/256 (28%), Positives = 127/256 (49%)
Query: 1 MMMGLMLHANAKSLIKRHMYKDALEVLTMGEEAFSLCDPKVLEFVDNGPLLQIDMVWCYF 60
+M+ + H ++ +KR Y AL L ++ F C ++L+ VDN +LQ+D+VWCYF
Sbjct: 232 LMLAMGYHEKGRAFLKRKEYGIALPFLLDADKYFCKCCTELLDTVDNYAVLQLDIVWCYF 291
Query: 61 MLRDISWLSEAGIRLRKAREGIERAHGKDSSRVRLLQAGRHPELALHLRMELLEGVAAYH 120
L + L +A +L A+ + +G++ R+ ++ E L LR+ LL+G+ YH
Sbjct: 292 RLEQLECLDDAEKKLSLAQTCFKNCYGENHQRLVHIKGNCGKEKVLFLRLYLLQGIRNYH 351
Query: 121 SGQFDKARNALTSAQAKFFQLQVPDESLSLVMSMGFKEQDAKRALRICSQDVGSAIDFLX 180
SG+ ++AR+ L A+ F +L + + +M +GF Q+A+ LR C +V A +
Sbjct: 352 SGRGEEARDYLNKARQLFKELYIDPSKVHSLMQLGFTAQEARLGLRACDGNVDHAAAHIT 411
Query: 181 XXXXXXXXXXXDNEQRRKEIMEQKRYGLTPLKKAVDIEKIKELVSIGFEKELVAEALRRN 240
Q RKE E+KR L E + L +G+ +AL +
Sbjct: 412 NRREELA-------QIRKEEKEKKRRRL---------ENVNCLKGMGYSAHAARQALHQA 455
Query: 241 ENDSQKALDDL-TNPE 255
+ ++AL L +NP+
Sbjct: 456 AGNLEEALKILISNPQ 471
>UNIPROTKB|E1BZ00 [details] [associations]
symbol:NUB1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0034341 "response to
interferon-gamma" evidence=IEA] [GO:0034612 "response to tumor
necrosis factor" evidence=IEA] InterPro:IPR000449
InterPro:IPR009060 Pfam:PF00627 GO:GO:0016567 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 GO:GO:0034612 GO:GO:0006511
GO:GO:0032436 InterPro:IPR019955 PROSITE:PS50053 SUPFAM:SSF46934
GO:GO:0034341 OMA:MWWLNDS GeneTree:ENSGT00390000010557
EMBL:AADN02000297 EMBL:AADN02000298 IPI:IPI00819254
Ensembl:ENSGALT00000038797 ArrayExpress:E1BZ00 Uniprot:E1BZ00
Length = 616
Score = 274 (101.5 bits), Expect = 9.5e-22, P = 9.5e-22
Identities = 70/256 (27%), Positives = 128/256 (50%)
Query: 1 MMMGLMLHANAKSLIKRHMYKDALEVLTMGEEAFSLCDPKVLEFVDNGPLLQIDMVWCYF 60
+++ + H ++L+K+ Y+ AL L ++ F C ++L VDN +LQ+D+VWCYF
Sbjct: 234 LVLAMGYHEKGRALMKKKEYEIALPYLLDADKHFCECSTELLNTVDNYAVLQLDIVWCYF 293
Query: 61 MLRDISWLSEAGIRLRKAREGIERAHGKDSSRVRLLQAGRHPELALHLRMELLEGVAAYH 120
L + L +A +L A+ +R +G++ R+ ++ E L LR+ LL+G+ YH
Sbjct: 294 RLEQLDCLDDAEKKLTTAQRCFQRCYGENHERLIDIKGSYGREKVLFLRLYLLQGIGHYH 353
Query: 121 SGQFDKARNALTSAQAKFFQLQVPDESLSLVMSMGFKEQDAKRALRICSQDVGSAIDFLX 180
SG+ +A + A + +L + E + + +GF EQ+A+ ALR C +V A + +
Sbjct: 354 SGREKEAAEYIQKASRLYEELYIDPEKVYRLALLGFSEQEARLALRACHGNVEHAANLIT 413
Query: 181 XXXXXXXXXXXDNEQRRKEIMEQKRYGLTPLKKAVDIEKIKELVSIGFEKELVAEALRRN 240
+ + + +I ++R K+ +E I L S+G+ + AL
Sbjct: 414 -----------NRREEKAQIRREER-----AKRRQRLEDINTLKSMGYSERAAQVALHYA 457
Query: 241 ENDSQKALDD-LTNPE 255
+ + +A L NPE
Sbjct: 458 QGNLDQAFKYILDNPE 473
>ZFIN|ZDB-GENE-080212-11 [details] [associations]
symbol:nub1 "negative regulator of ubiquitin-like
proteins 1" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000449 InterPro:IPR009060 Pfam:PF00627
ZFIN:ZDB-GENE-080212-11 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 SUPFAM:SSF46934 CTD:51667 HOVERGEN:HBG045600
EMBL:BC154454 IPI:IPI00860240 RefSeq:NP_001107052.1
UniGene:Dr.13838 ProteinModelPortal:A8WFT9 GeneID:557021
KEGG:dre:557021 NextBio:20881779 Uniprot:A8WFT9
Length = 583
Score = 272 (100.8 bits), Expect = 1.6e-21, P = 1.6e-21
Identities = 67/247 (27%), Positives = 119/247 (48%)
Query: 1 MMMGLMLHANAKSLIKRHMYKDALEVLTMGEEAFSLCDPKVLEFVDNGPLLQIDMVWCYF 60
+++ + H ++L+K+ + AL L E F C+ +L VDN +LQ+D+VWCY
Sbjct: 226 LILAMGFHERGRALMKKRDHSAALSYLLRANEQFKKCNSAILHTVDNYAVLQLDVVWCYQ 285
Query: 61 MLRDISWLSEAGIRLRKAREGIERAHGKDSSRVRLLQAGRHPELALHLRMELLEGVAAYH 120
L + L +A RL +A ++ +G+ SR++ ++ E L LR+ LL+ V +
Sbjct: 286 ALEQMECLDDAQERLEEAERCFQKCYGEKQSRLQQIKGHTGGEEVLFLRLHLLQTVLMFV 345
Query: 121 SGQFDKARNALTSAQAKFFQLQVPDESLSLVMSMGFKEQDAKRALRICSQDVGSAIDFLX 180
G ++A + L + + QL + + L + GF EQ+A+ LR C DV A + +
Sbjct: 346 KGNENQALDKLRDVEHLYSQLNLDPQKLQQLQDKGFSEQEARLGLRACRGDVSEAENLIS 405
Query: 181 XXXXXXXXXXXDNEQRRKEIMEQKRYGLTPLKKAVDIEKIKELVSIGFEKELVAEALRRN 240
++ K++++ K K+ ++ I LV +GFE+ AL +
Sbjct: 406 ------------QRKKEKQVLKLKEQD----KRRRRLQDINTLVELGFERRDAQRALHQA 449
Query: 241 ENDSQKA 247
D KA
Sbjct: 450 RGDVDKA 456
>UNIPROTKB|Q05B69 [details] [associations]
symbol:NUB1 "Negative regulator of ubiquitin-like proteins
1" species:9913 "Bos taurus" [GO:0034612 "response to tumor
necrosis factor" evidence=IEA] [GO:0034341 "response to
interferon-gamma" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR000449 InterPro:IPR009060 Pfam:PF00627
GO:GO:0016567 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
GO:GO:0034612 GO:GO:0006511 GO:GO:0032436 SUPFAM:SSF46934
GO:GO:0034341 IPI:IPI00706809 UniGene:Bt.61349 CTD:51667
HOGENOM:HOG000113882 HOVERGEN:HBG045600 OMA:MWWLNDS
GeneTree:ENSGT00390000010557 EMBL:DAAA02012025 EMBL:BC122681
RefSeq:NP_001074375.1 SMR:Q05B69 STRING:Q05B69
Ensembl:ENSBTAT00000005970 GeneID:511298 KEGG:bta:511298
InParanoid:Q05B69 NextBio:20869871 Uniprot:Q05B69
Length = 614
Score = 270 (100.1 bits), Expect = 3.4e-21, P = 3.4e-21
Identities = 72/256 (28%), Positives = 126/256 (49%)
Query: 1 MMMGLMLHANAKSLIKRHMYKDALEVLTMGEEAFSLCDPKVLEFVDNGPLLQIDMVWCYF 60
+M+ + H ++ +KR + AL L + F C ++L+ VDN +LQ+D+VWCYF
Sbjct: 232 LMLAMGYHEKGRAFLKRKEHGIALPCLLDADRYFCECCTELLDTVDNYAVLQLDIVWCYF 291
Query: 61 MLRDISWLSEAGIRLRKAREGIERAHGKDSSRVRLLQAGRHPELALHLRMELLEGVAAYH 120
L + L +A +L+ A+E + +G++ R+ ++ E L LR+ LL+G+ YH
Sbjct: 292 RLGQLECLDDAEKKLKLAQECFRKCYGENHQRLLHIKGNCGKEKVLFLRLYLLQGIRNYH 351
Query: 121 SGQFDKARNALTSAQAKFFQLQVPDESLSLVMSMGFKEQDAKRALRICSQDVGSAIDFLX 180
SG ++A L A+ F +L + + +M +GF Q+A+ LR C +V A +
Sbjct: 352 SGNGEEAYENLNKARQLFKELYIDPSKVHNLMQLGFSAQEARLGLRACDGNVDHAAVHIA 411
Query: 181 XXXXXXXXXXXDNEQRRKEIMEQKRYGLTPLKKAVDIEKIKELVSIGFEKELVAEALRRN 240
+ +Q +KE E+K+ L E I L +G+ +AL +
Sbjct: 412 NRRE-------ELDQIKKEEREKKKRRL---------ENINHLKGMGYSMRAARQALHQA 455
Query: 241 ENDSQKALDDLT-NPE 255
+ ++AL L NP+
Sbjct: 456 AGNLEEALKILLHNPQ 471
>MGI|MGI:1889001 [details] [associations]
symbol:Nub1 "negative regulator of ubiquitin-like proteins
1" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] InterPro:IPR000449
InterPro:IPR009060 Pfam:PF00627 MGI:MGI:1889001 GO:GO:0005634
GO:GO:0016567 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
GO:GO:0034612 GO:GO:0006511 GO:GO:0032436 SUPFAM:SSF46934
GO:GO:0034341 eggNOG:NOG302480 OrthoDB:EOG4K3KWC CTD:51667
HOGENOM:HOG000113882 HOVERGEN:HBG045600 OMA:MWWLNDS ChiTaRS:NUB1
EMBL:U27462 EMBL:AF534114 EMBL:BC037451 IPI:IPI00108775
RefSeq:NP_058016.2 UniGene:Mm.5856 PDB:1VEG PDBsum:1VEG
ProteinModelPortal:P54729 SMR:P54729 STRING:P54729
PhosphoSite:P54729 PaxDb:P54729 PRIDE:P54729
Ensembl:ENSMUST00000068825 GeneID:53312 KEGG:mmu:53312
InParanoid:P54729 EvolutionaryTrace:P54729 NextBio:310093
Bgee:P54729 CleanEx:MM_NUB1 Genevestigator:P54729
GermOnline:ENSMUSG00000028954 Uniprot:P54729
Length = 614
Score = 269 (99.8 bits), Expect = 4.5e-21, P = 4.5e-21
Identities = 75/257 (29%), Positives = 126/257 (49%)
Query: 1 MMMGLMLHANAKSLIKRHMYKDALEVLTMGEEAFSLCDPKVLEFVDNGPLLQIDMVWCYF 60
+M+ + H ++ +KR Y AL L + F C ++L+ VDN +LQ+D+VWCYF
Sbjct: 233 LMLAMGYHEKGRAFLKRKEYGIALPCLLDADRYFCECK-ELLDTVDNYAVLQLDIVWCYF 291
Query: 61 MLRDISWLSEAGIRLRKAREGIERAHGKDSSRVRLLQAGRHPELALHLRMELLEGVAAYH 120
L + L +A +L A++ + +G++ R+ ++ E L LR+ LL+G+ YH
Sbjct: 292 RLEQLECLDDAEKKLNLAQKCFKNCYGENHQRLVHIKGNCGKEKVLFLRLYLLQGIQNYH 351
Query: 121 SGQFDKARNALTSAQAKFFQLQVPDESLSLVMSMGFKEQDAKRALRICSQDVGSAIDFLX 180
SG ++AR L A+ F +L + + ++ +GF Q+A+ LR C +V A +
Sbjct: 352 SGNGEEAREYLNKARQLFKELYIDPSKVHNLLQLGFTAQEARLGLRACDGNVDHAATHIS 411
Query: 181 XXXXXXXXXXXDNEQRRKEIMEQKRYGLTPLKKAVDIEKIKELVSIGFEKELVAEAL--- 237
Q RKE E++R L E + L +G+ + +AL
Sbjct: 412 NRREELA-------QIRKEEKEKRRRRL---------ENVNTLRGMGYSTQAAKQALHQA 455
Query: 238 RRNENDSQKALDDLTNP 254
R N +D+ K L L+NP
Sbjct: 456 RGNLDDALKVL--LSNP 470
>RGD|1359489 [details] [associations]
symbol:Nub1 "negative regulator of ubiquitin-like proteins 1"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0016567 "protein ubiquitination" evidence=IEA;ISO] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0034341 "response to
interferon-gamma" evidence=IEA;ISO] [GO:0034612 "response to tumor
necrosis factor" evidence=IEA;ISO] InterPro:IPR000449
InterPro:IPR009060 Pfam:PF00627 RGD:1359489 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 SUPFAM:SSF46934 eggNOG:NOG302480
CTD:51667 HOGENOM:HOG000113882 HOVERGEN:HBG045600
GeneTree:ENSGT00390000010557 EMBL:BC083586 IPI:IPI00568390
RefSeq:NP_001013947.1 UniGene:Rn.72440 SMR:Q5XIT4 STRING:Q5XIT4
Ensembl:ENSRNOT00000045311 GeneID:296731 KEGG:rno:296731
NextBio:641720 Genevestigator:Q5XIT4 Uniprot:Q5XIT4
Length = 613
Score = 262 (97.3 bits), Expect = 3.4e-20, P = 3.4e-20
Identities = 72/257 (28%), Positives = 126/257 (49%)
Query: 1 MMMGLMLHANAKSLIKRHMYKDALEVLTMGEEAFSLCDPKVLEFVDNGPLLQIDMVWCYF 60
+M+ + H ++ +KR Y AL L + F C ++L+ VDN +LQ+D+VWCYF
Sbjct: 232 LMLAMGYHEKGRAFLKRKEYGIALPCLLDADRYFCECK-ELLDTVDNYAVLQLDIVWCYF 290
Query: 61 MLRDISWLSEAGIRLRKAREGIERAHGKDSSRVRLLQAGRHPELALHLRMELLEGVAAYH 120
L + L +A +L A+ +G++ R+ ++ E L LR+ LL+G+ YH
Sbjct: 291 RLEQLECLDDAEKKLNLAQTCFTNCYGENHQRLVNIKGNCGKEKVLFLRLYLLQGIRNYH 350
Query: 121 SGQFDKARNALTSAQAKFFQLQVPDESLSLVMSMGFKEQDAKRALRICSQDVGSAIDFLX 180
SG ++AR L A+ F +L + + ++ +GF Q+A+ LR C +V A +
Sbjct: 351 SGNGEEAREYLNKARQLFKELYIDPSKVHNLLQLGFTAQEARLGLRACDGNVDHAATHIS 410
Query: 181 XXXXXXXXXXXDNEQRRKEIMEQKRYGLTPLKKAVDIEKIKELVSIGFEKELVAEAL--- 237
RR+E+ + ++ K+ +E + L +G+ + +AL
Sbjct: 411 --------------NRREELAQIRKEEKEKRKRR--LESVNTLRGMGYSTQAAKQALHQA 454
Query: 238 RRNENDSQKALDDLTNP 254
R N +D+ K L L+NP
Sbjct: 455 RGNLDDALKIL--LSNP 469
>UNIPROTKB|Q8MJ87 [details] [associations]
symbol:NUB1 "NEDD8 ultimate buster 1" species:9913 "Bos
taurus" [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0034612 "response to tumor
necrosis factor" evidence=IEA] [GO:0034341 "response to
interferon-gamma" evidence=IEA] InterPro:IPR000449
InterPro:IPR009060 Pfam:PF00627 GO:GO:0005634 GO:GO:0016567
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 GO:GO:0034612
GO:GO:0006511 GO:GO:0032436 SUPFAM:SSF46934 GO:GO:0034341
EMBL:AF514279 IPI:IPI00706809 UniGene:Bt.61349
ProteinModelPortal:Q8MJ87 SMR:Q8MJ87 STRING:Q8MJ87 eggNOG:NOG302480
InParanoid:Q8MJ87 OrthoDB:EOG4K3KWC ArrayExpress:Q8MJ87
Uniprot:Q8MJ87
Length = 221
Score = 110 (43.8 bits), Expect = 0.00084, P = 0.00083
Identities = 55/219 (25%), Positives = 88/219 (40%)
Query: 196 RRKEIMEQKRYGLTPLKKAVDIEKIKELVSIGFEKELVAEALRRNENDSQKALDDLT-NP 254
RR+E+ + K+ KK +E I L +G+ +AL + + ++AL L NP
Sbjct: 20 RREELDQIKKEERE--KKKRRLENINHLKGMGYSMRAARQALHQAAGNLEEALKILLHNP 77
Query: 255 ESNSAIQLYIESRKRKRCRQAADAKIEQLVAMGFERPRVIEACRAGGDDIHQIMLQLLGE 314
+ ES R++ + KI+QLV MGF+ A R D++ Q+ Q L
Sbjct: 78 QLWWLNDSAPESNNRQQ--SPSQEKIDQLVYMGFDAVAAKAALRVFRDNV-QLAAQTLVH 134
Query: 315 PGXXXXXXXXXXXXXXXXMPNNGEPSSSINNENVEGDPDSSFEETSATEDVNGRDVEMED 374
G P+ PS S + D D ET A ++ D+ +
Sbjct: 135 NGGRLPPDLQLSAEDSSSTPSTS-PSDSAGTSSASTDEDM---ETEAVNEIL-EDIPEHE 189
Query: 375 ELANDLTGDVFADYDIEVTKEGEAISEYLSLLDSVAGIA 413
E D D +I I+EYLS ++++ A
Sbjct: 190 E---DYLDSTLEDEEI-------IIAEYLSYVENIKSAA 218
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.369 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 419 391 0.00094 117 3 11 22 0.42 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 610 (65 KB)
Total size of DFA: 222 KB (2123 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 34.90u 0.11s 35.01t Elapsed: 00:00:02
Total cpu time: 34.90u 0.11s 35.01t Elapsed: 00:00:02
Start: Sat May 11 16:25:54 2013 End: Sat May 11 16:25:56 2013