BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014749
(419 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54XK2|SC61A_DICDI Protein transport protein Sec61 subunit alpha OS=Dictyostelium
discoideum GN=sec61a PE=3 SV=1
Length = 475
Score = 594 bits (1531), Expect = e-169, Method: Compositional matrix adjust.
Identities = 278/393 (70%), Positives = 333/393 (84%)
Query: 4 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
GFR L +V+PF +PEV DRKIPFREKV++T I LFIFLVCSQ+PLYGI ST +DP
Sbjct: 2 GFRFLDIVKPFTSLVPEVGQPDRKIPFREKVLWTAICLFIFLVCSQIPLYGIRSTDSSDP 61
Query: 64 FYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLG 123
FYW +VI+ASNRGT+MELGI+PIVTSG+VMQLLAG+K+IE+D +V+ DR L + AQKL G
Sbjct: 62 FYWAKVIMASNRGTLMELGISPIVTSGMVMQLLAGAKLIEIDQSVKADRDLFSAAQKLFG 121
Query: 124 ILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGIS 183
+LI +G+ VAY+ SG YG + LG GN LI+LQL FAGIIV+ LDELLQKGYG+GSGIS
Sbjct: 122 MLICVGQGVAYIWSGSYGDPAVLGFGNCFLIVLQLFFAGIIVMLLDELLQKGYGIGSGIS 181
Query: 184 LFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLP 243
LFIATNICE+I+WK FSPTT++ G+G EFEGAVIALFHLL+T+ +KV AL+EAFYRQNLP
Sbjct: 182 LFIATNICETIVWKTFSPTTVSVGKGTEFEGAVIALFHLLLTRNDKVRALKEAFYRQNLP 241
Query: 244 NITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSN 303
NITNLLATVL+F++V+YFQGF+V LPV+S GQQG YPIKLFYTSN+PIILQSALVSN
Sbjct: 242 NITNLLATVLIFMVVIYFQGFRVDLPVKSTRVSGQQGTYPIKLFYTSNIPIILQSALVSN 301
Query: 304 LYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHAL 363
LYFISQLLYR++ N VNL G W+ SEYS IPV GL YY+++P +++ + A+PFHAL
Sbjct: 302 LYFISQLLYRRFPDNILVNLFGAWRTSEYSQQMIPVSGLTYYISSPNNMSAVLADPFHAL 361
Query: 364 FYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
FY+ FMLT+CALFSK WIEVSGSSARDVAKQLK
Sbjct: 362 FYITFMLTSCALFSKVWIEVSGSSARDVAKQLK 394
>sp|P38379|SC61A_PYRSA Protein transport protein Sec61 subunit alpha OS=Pyrenomonas salina
PE=2 SV=1
Length = 494
Score = 551 bits (1420), Expect = e-156, Method: Compositional matrix adjust.
Identities = 272/396 (68%), Positives = 335/396 (84%), Gaps = 3/396 (0%)
Query: 4 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
G R L LV+PF+ LPEV SA +KIP EK+++T I +F++LVC Q+PLYGI +T +DP
Sbjct: 5 GVRFLTLVKPFMFALPEVSSATKKIPVNEKLLWTSIVVFLYLVCCQIPLYGITNTKSSDP 64
Query: 64 FYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLG 123
FYWMRVILASN+GT+MELGI+PIVTSGLVMQLLAGSKII+VD +ED+ L GAQKLLG
Sbjct: 65 FYWMRVILASNKGTLMELGISPIVTSGLVMQLLAGSKIIDVDQGTKEDKTLFQGAQKLLG 124
Query: 124 ILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGIS 183
ILI IGE+VAYV+SGMYG V LGAGNAILII+QL +GIIVICLDELLQKGYG+GS IS
Sbjct: 125 ILITIGESVAYVLSGMYGDVKDLGAGNAILIIVQLFTSGIIVICLDELLQKGYGIGSAIS 184
Query: 184 LFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLP 243
LFIATN+CESI+WK+FSPTTIN+GRG EFEGA++ALF L+ITK +KV AL+EAFYRQNLP
Sbjct: 185 LFIATNVCESIVWKSFSPTTINTGRGTEFEGALVALFQLMITKTDKVRALQEAFYRQNLP 244
Query: 244 NITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGA-YPIKLFYTSNMPIILQSALVS 302
N+TNLLATVLVF++VVYFQGF+V LP+ ++G G YPIKLFYTSNMPIILQ+ALVS
Sbjct: 245 NVTNLLATVLVFVLVVYFQGFQVELPITPAKSKGMAGQFYPIKLFYTSNMPIILQTALVS 304
Query: 303 NLYFISQLLYRKYSGNFFVNLLGKWKESEY--SGHSIPVGGLAYYVTAPASLADMAANPF 360
NLYFISQ+LY++Y N +++LG+W+E E SG PVGG+AYY++ S A++ ++P
Sbjct: 305 NLYFISQILYKRYPENIIIHILGRWEEPEMSVSGQMRPVGGIAYYISPLNSFAEIVSDPV 364
Query: 361 HALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
HAL Y++F+L +CALFSKTWI+VSG+SA DV+KQL+
Sbjct: 365 HALLYIIFILASCALFSKTWIQVSGTSASDVSKQLR 400
>sp|Q90ZM2|S61A1_DANRE Protein transport protein Sec61 subunit alpha-like 1 OS=Danio rerio
GN=sec61al1 PE=2 SV=3
Length = 476
Score = 545 bits (1403), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/393 (68%), Positives = 326/393 (82%), Gaps = 3/393 (0%)
Query: 6 RVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFY 65
+ L +++PF LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADPFY
Sbjct: 4 KFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFY 63
Query: 66 WMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGIL 125
WMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + + DRAL NGAQKL G++
Sbjct: 64 WMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFGMI 122
Query: 126 IAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLF 185
I IG+A+ YVM+GMYG S++GAG +LII+QL AG+IV+ LDELLQKGYGLGSGISLF
Sbjct: 123 ITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLF 182
Query: 186 IATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNI 245
IATNICE+I+WKAFSPTT+N+GRG EFEGA+IALFHLL T+ +KV ALREAFYRQNLPN+
Sbjct: 183 IATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNL 242
Query: 246 TNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLY 305
NL+ATV VF +V+YFQGF+V LP++S RGQ YPIKLFYTSN+PIILQSALVSNLY
Sbjct: 243 MNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSNLY 302
Query: 306 FISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFHAL 363
ISQ+L ++SGNF VNLLG W ++ G + PVGGL YY++ P S + +P HA+
Sbjct: 303 VISQMLSTRFSGNFLVNLLGTWSDTSSGGPARAYPVGGLCYYLSPPESFGSVLDDPVHAV 362
Query: 364 FYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
Y+VFML +CA FSKTWIEVSGSSA+DVAKQLK
Sbjct: 363 IYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLK 395
>sp|Q7T278|SC61A_HARAN Protein transport protein Sec61 subunit alpha OS=Harpagifer
antarcticus GN=sec61a PE=2 SV=3
Length = 476
Score = 544 bits (1401), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/395 (68%), Positives = 325/395 (82%), Gaps = 3/395 (0%)
Query: 4 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
G + L +++PF LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 2 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 61
Query: 64 FYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLG 123
FYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + + DRAL NGAQKL G
Sbjct: 62 FYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFG 120
Query: 124 ILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGIS 183
++I IG+A+ YVM+GMYG S++GAG +LII+QL AG+IV+ LDELLQKGYGLGSGIS
Sbjct: 121 MIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 180
Query: 184 LFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLP 243
LFIATNICE+I+WKAFSPTT+N+GRG EFEGA+IALFHLL T+ +KV ALREAFYRQNLP
Sbjct: 181 LFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLP 240
Query: 244 NITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSN 303
NI NL+ATV VF +V+YFQGF+V LP++S RGQ YPIKLFYTSN+PIILQSALVSN
Sbjct: 241 NILNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSN 300
Query: 304 LYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFH 361
LY ISQ+L ++SGNF VNLLG W ++ G + PV GL YY++ P S + +P H
Sbjct: 301 LYVISQMLSTRFSGNFLVNLLGTWSDATSGGPARAYPVAGLCYYLSPPESFGSVLDDPVH 360
Query: 362 ALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
A Y+VFML +CA FSKTWIEVSGSSA+DVAKQLK
Sbjct: 361 AAIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLK 395
>sp|Q7T277|SC61A_DISMA Protein transport protein Sec61 subunit alpha OS=Dissostichus
mawsoni GN=sec61a PE=2 SV=3
Length = 476
Score = 544 bits (1401), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/395 (68%), Positives = 325/395 (82%), Gaps = 3/395 (0%)
Query: 4 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
G + L +++PF LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 2 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 61
Query: 64 FYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLG 123
FYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + + DRAL NGAQKL G
Sbjct: 62 FYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFG 120
Query: 124 ILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGIS 183
++I IG+A+ YVM+GMYG S++GAG +LII+QL AG+IV+ LDELLQKGYGLGSGIS
Sbjct: 121 MIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 180
Query: 184 LFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLP 243
LFIATNICE+I+WKAFSPTT+N+GRG EFEGA+IALFHLL T+ +KV ALREAFYRQNLP
Sbjct: 181 LFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLP 240
Query: 244 NITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSN 303
NI NL+ATV VF +V+YFQGF+V LP++S RGQ YPIKLFYTSN+PIILQSALVSN
Sbjct: 241 NILNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSN 300
Query: 304 LYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFH 361
LY ISQ+L ++SGNF VNLLG W ++ G + PV GL YY++ P S + +P H
Sbjct: 301 LYVISQMLSTRFSGNFLVNLLGTWSDATSGGPARAYPVAGLCYYLSPPESFGSVLDDPVH 360
Query: 362 ALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
A Y+VFML +CA FSKTWIEVSGSSA+DVAKQLK
Sbjct: 361 AAIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLK 395
>sp|Q8AY32|SC61A_GADOC Protein transport protein Sec61 subunit alpha OS=Gadus ogac
GN=sec61a PE=2 SV=3
Length = 476
Score = 544 bits (1401), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/395 (67%), Positives = 325/395 (82%), Gaps = 3/395 (0%)
Query: 4 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
G + L +++PF LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 2 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 61
Query: 64 FYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLG 123
FYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + + DRAL NGAQKL G
Sbjct: 62 FYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFG 120
Query: 124 ILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGIS 183
++I IG+A+ YVM+GMYG S++GAG ++II+QL AG+IV+ LDELLQKGYGLGSGIS
Sbjct: 121 MIITIGQAIVYVMTGMYGDPSEMGAGICLVIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 180
Query: 184 LFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLP 243
LFIATNICE+I+WKAFSPTT+N+GRG EFEGA+IALFHLL T+ +KV ALREAFYRQNLP
Sbjct: 181 LFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLP 240
Query: 244 NITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSN 303
N+ NL+ATV VF +V+YFQGF+V LP++S RGQ YPIKLFYTSN+PIILQSALVSN
Sbjct: 241 NLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSN 300
Query: 304 LYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFH 361
LY ISQ+L ++SGNF VNLLG W ++ G + PVGGL YY + P S + +P H
Sbjct: 301 LYVISQMLSTRFSGNFLVNLLGTWSDTSTGGPARAYPVGGLCYYFSPPESFGSVLDDPVH 360
Query: 362 ALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
A Y+VFML +CA FSKTWIEVSGSSA+DVAKQLK
Sbjct: 361 ASIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLK 395
>sp|Q8AY36|SC61A_PAGBO Protein transport protein Sec61 subunit alpha OS=Pagothenia
borchgrevinki GN=sec61a PE=2 SV=3
Length = 476
Score = 543 bits (1400), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/395 (68%), Positives = 324/395 (82%), Gaps = 3/395 (0%)
Query: 4 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
G + L ++PF LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 2 GIKFLEFIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 61
Query: 64 FYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLG 123
FYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + + DRAL NGAQKL G
Sbjct: 62 FYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFG 120
Query: 124 ILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGIS 183
++I IG+A+ YVM+GMYG S++GAG +LII+QL AG+IV+ LDELLQKGYGLGSGIS
Sbjct: 121 MIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 180
Query: 184 LFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLP 243
LFIATNICE+I+WKAFSPTT+N+GRG EFEGA+IALFHLL T+ +KV ALREAFYRQNLP
Sbjct: 181 LFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLP 240
Query: 244 NITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSN 303
NI NL+ATV VF +V+YFQGF+V LP++S RGQ YPIKLFYTSN+PIILQSALVSN
Sbjct: 241 NILNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSN 300
Query: 304 LYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFH 361
LY ISQ+L ++SGNF VNLLG W ++ G + PV GL YY++ P S + +P H
Sbjct: 301 LYVISQMLSTRFSGNFLVNLLGTWSDATSGGPARAYPVAGLCYYLSPPESFGSVLDDPVH 360
Query: 362 ALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
A Y+VFML +CA FSKTWIEVSGSSA+DVAKQLK
Sbjct: 361 AAIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLK 395
>sp|Q8AY35|SC61A_NOTAN Protein transport protein Sec61 subunit alpha OS=Notothenia
angustata GN=sec61a PE=2 SV=3
Length = 476
Score = 543 bits (1400), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/395 (68%), Positives = 324/395 (82%), Gaps = 3/395 (0%)
Query: 4 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
G + L ++PF LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 2 GIKFLEFIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 61
Query: 64 FYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLG 123
FYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + + DRAL NGAQKL G
Sbjct: 62 FYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFG 120
Query: 124 ILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGIS 183
++I IG+A+ YVM+GMYG S++GAG +LII+QL AG+IV+ LDELLQKGYGLGSGIS
Sbjct: 121 MIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 180
Query: 184 LFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLP 243
LFIATNICE+I+WKAFSPTT+N+GRG EFEGA+IALFHLL T+ +KV ALREAFYRQNLP
Sbjct: 181 LFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLP 240
Query: 244 NITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSN 303
NI NL+ATV VF +V+YFQGF+V LP++S RGQ YPIKLFYTSN+PIILQSALVSN
Sbjct: 241 NILNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSN 300
Query: 304 LYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFH 361
LY ISQ+L ++SGNF VNLLG W ++ G + PV GL YY++ P S + +P H
Sbjct: 301 LYVISQMLSTRFSGNFLVNLLGTWSDATSGGPARAYPVAGLCYYLSPPESFGSVLDDPVH 360
Query: 362 ALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
A Y+VFML +CA FSKTWIEVSGSSA+DVAKQLK
Sbjct: 361 AAIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLK 395
>sp|Q9JLR1|S61A2_MOUSE Protein transport protein Sec61 subunit alpha isoform 2 OS=Mus
musculus GN=Sec61a2 PE=2 SV=3
Length = 476
Score = 543 bits (1399), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/395 (68%), Positives = 328/395 (83%), Gaps = 3/395 (0%)
Query: 4 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
G + L +++PF LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 2 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 61
Query: 64 FYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLG 123
FYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + + DRAL NGAQKL G
Sbjct: 62 FYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFG 120
Query: 124 ILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGIS 183
++I IG+A+ YVM+GMYG +++GAG +LII+QL AG+IV+ LDELLQKGYGLGSGIS
Sbjct: 121 MIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 180
Query: 184 LFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLP 243
LFIATNICE+I+WKAFSPTTIN+GRG EFEGAVIALFHLL T+ +KV ALREAFYRQNLP
Sbjct: 181 LFIATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLP 240
Query: 244 NITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSN 303
N+ NL+ATV VF +V+YFQGF+V LP++S RGQ +YPIKLFYTSN+PIILQSALVSN
Sbjct: 241 NLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSN 300
Query: 304 LYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFH 361
LY ISQ+L ++SGNF VNLLG+W + G S PVGGL YY++ P S+ + +P H
Sbjct: 301 LYVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPVH 360
Query: 362 ALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
+ Y++FML +CA FSKTWIEVSGSSA+DVAKQLK
Sbjct: 361 VVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLK 395
>sp|Q9H9S3|S61A2_HUMAN Protein transport protein Sec61 subunit alpha isoform 2 OS=Homo
sapiens GN=SEC61A2 PE=2 SV=3
Length = 476
Score = 543 bits (1399), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/395 (68%), Positives = 328/395 (83%), Gaps = 3/395 (0%)
Query: 4 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
G + L +++PF LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 2 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 61
Query: 64 FYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLG 123
FYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + + DRAL NGAQKL G
Sbjct: 62 FYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFG 120
Query: 124 ILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGIS 183
++I IG+A+ YVM+GMYG +++GAG +LII+QL AG+IV+ LDELLQKGYGLGSGIS
Sbjct: 121 MIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 180
Query: 184 LFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLP 243
LFIATNICE+I+WKAFSPTTIN+GRG EFEGAVIALFHLL T+ +KV ALREAFYRQNLP
Sbjct: 181 LFIATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLP 240
Query: 244 NITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSN 303
N+ NL+ATV VF +V+YFQGF+V LP++S RGQ +YPIKLFYTSN+PIILQSALVSN
Sbjct: 241 NLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSN 300
Query: 304 LYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFH 361
LY ISQ+L ++SGNF VNLLG+W + G S PVGGL YY++ P S+ + +P H
Sbjct: 301 LYVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPVH 360
Query: 362 ALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
+ Y++FML +CA FSKTWIEVSGSSA+DVAKQLK
Sbjct: 361 VVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLK 395
>sp|Q2KHX4|S61A2_BOVIN Protein transport protein Sec61 subunit alpha isoform 2 OS=Bos
taurus GN=SEC61A2 PE=2 SV=3
Length = 476
Score = 543 bits (1399), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/395 (68%), Positives = 328/395 (83%), Gaps = 3/395 (0%)
Query: 4 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
G + L +++PF LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 2 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 61
Query: 64 FYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLG 123
FYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + + DRAL NGAQKL G
Sbjct: 62 FYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFG 120
Query: 124 ILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGIS 183
++I IG+A+ YVM+GMYG +++GAG +LII+QL AG+IV+ LDELLQKGYGLGSGIS
Sbjct: 121 MIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 180
Query: 184 LFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLP 243
LFIATNICE+I+WKAFSPTTIN+GRG EFEGAVIALFHLL T+ +KV ALREAFYRQNLP
Sbjct: 181 LFIATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLP 240
Query: 244 NITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSN 303
N+ NL+ATV VF +V+YFQGF+V LP++S RGQ +YPIKLFYTSN+PIILQSALVSN
Sbjct: 241 NLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSN 300
Query: 304 LYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFH 361
LY ISQ+L ++SGNF VNLLG+W + G S PVGGL YY++ P S+ + +P H
Sbjct: 301 LYVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPVH 360
Query: 362 ALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
+ Y++FML +CA FSKTWIEVSGSSA+DVAKQLK
Sbjct: 361 VVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLK 395
>sp|Q8AY31|SC61A_BOVVA Protein transport protein Sec61 subunit alpha OS=Bovichtus
variegatus GN=sec61a PE=2 SV=3
Length = 476
Score = 543 bits (1399), Expect = e-153, Method: Compositional matrix adjust.
Identities = 268/395 (67%), Positives = 324/395 (82%), Gaps = 3/395 (0%)
Query: 4 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
G + L ++PF LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 2 GIKFLEFIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 61
Query: 64 FYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLG 123
FYWMRVILASNRGT+MELGI PIVTSGL+MQLLAG+KIIEV + + DRAL NGAQKL G
Sbjct: 62 FYWMRVILASNRGTLMELGIAPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFG 120
Query: 124 ILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGIS 183
++I IG+A+ YVM+GMYG S++GAG +LII+QL AG+IV+ LDELLQKGYGLGSGIS
Sbjct: 121 MIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 180
Query: 184 LFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLP 243
LFIATNICE+I+WKAF PTT+N+GRG EFEGA+IALFHLL T+ +KV ALREAFYRQNLP
Sbjct: 181 LFIATNICETIVWKAFGPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLP 240
Query: 244 NITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSN 303
N+ NL+ATV VF +V+YFQGF+V LP++S RGQ YPIKLFYTSN+PIILQSALVSN
Sbjct: 241 NLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSN 300
Query: 304 LYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFH 361
LY ISQ+L ++SGNF VNLLG W ++ SG + PV GL YY++ P S + +P H
Sbjct: 301 LYVISQMLSTRFSGNFLVNLLGTWSDATTSGPARAYPVAGLCYYLSPPESFGSVLDDPVH 360
Query: 362 ALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
A+ Y+VFML +CA FSKTWIEVSGSSA+DVAKQLK
Sbjct: 361 AVIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLK 395
>sp|Q98SN8|S61A2_ONCMY Protein transport protein Sec61 subunit alpha isoform B
OS=Oncorhynchus mykiss GN=sec61ab PE=2 SV=3
Length = 476
Score = 543 bits (1399), Expect = e-153, Method: Compositional matrix adjust.
Identities = 269/395 (68%), Positives = 323/395 (81%), Gaps = 3/395 (0%)
Query: 4 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
G + L +++PF LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 2 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 61
Query: 64 FYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLG 123
FYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + + DRAL NGAQKL G
Sbjct: 62 FYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFG 120
Query: 124 ILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGIS 183
++I IG+A+ YVM+GMYG S +GAG +LII+QL AG+IV+ LDELLQKGYGLGSGIS
Sbjct: 121 MIITIGQAIVYVMTGMYGDPSDMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 180
Query: 184 LFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLP 243
LFIATNICE+I+WKAFSPTT+N+GRG EFEGA+IALFHLL T+ +KV ALREAFYRQNLP
Sbjct: 181 LFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLP 240
Query: 244 NITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSN 303
N+ NLLATV VF +V+YFQGF+V LP++S RGQ YPIKLFYTSN+PIILQSALVSN
Sbjct: 241 NLMNLLATVFVFGVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSN 300
Query: 304 LYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFH 361
LY ISQ+L ++SGNF VNLLG W ++ G + PVGGL YY + P S + +P H
Sbjct: 301 LYVISQMLSTRFSGNFLVNLLGTWSDTSSGGPARAYPVGGLCYYFSPPESFGSVLDDPIH 360
Query: 362 ALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
A Y+ FML +CA FSKTWIEVSGSSA+DVAKQLK
Sbjct: 361 AAIYICFMLGSCAFFSKTWIEVSGSSAKDVAKQLK 395
>sp|Q98SN9|S61A1_ONCMY Protein transport protein Sec61 subunit alpha isoform A
OS=Oncorhynchus mykiss GN=sec61aa PE=2 SV=3
Length = 476
Score = 543 bits (1399), Expect = e-153, Method: Compositional matrix adjust.
Identities = 267/395 (67%), Positives = 326/395 (82%), Gaps = 3/395 (0%)
Query: 4 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
G + L +++PF LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 2 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 61
Query: 64 FYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLG 123
FYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + + DRAL NGAQKL G
Sbjct: 62 FYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFG 120
Query: 124 ILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGIS 183
++I IG+++ YVM+GMYG S++GAG +LII+QL AG+IV+ LDELLQKGYGLGSGIS
Sbjct: 121 MIITIGQSIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 180
Query: 184 LFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLP 243
LFIATNICE+I+WKAFSPTT+N+GRG EFEGA+IALFHLL T+ +KV ALREAFYRQNLP
Sbjct: 181 LFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLP 240
Query: 244 NITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSN 303
N+ NL+ATV VF +V+YFQGF+V LP++S RGQ YPIKLFYTSN+PIILQSALVSN
Sbjct: 241 NLLNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSN 300
Query: 304 LYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFH 361
LY ISQ+L ++SGNF VNLLG W ++ G + PVGGL Y+++ P S + +P H
Sbjct: 301 LYVISQMLSTRFSGNFLVNLLGTWSDTSTGGPARAYPVGGLCYFLSPPESFGSVLDDPIH 360
Query: 362 ALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
A Y+VFML +CA FSKTWIEVSGSSA+DVAKQLK
Sbjct: 361 AAIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLK 395
>sp|Q90YL4|S61A2_DANRE Protein transport protein Sec61 subunit alpha-like 2 OS=Danio rerio
GN=sec61al2 PE=2 SV=3
Length = 476
Score = 541 bits (1395), Expect = e-153, Method: Compositional matrix adjust.
Identities = 264/393 (67%), Positives = 326/393 (82%), Gaps = 3/393 (0%)
Query: 6 RVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFY 65
+ L +++PF LPE+Q +R+I F+EKV++T I+LFIFLVC Q+PL+GI S+ ADPFY
Sbjct: 4 KFLEVIKPFCAVLPEIQKPERRIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFY 63
Query: 66 WMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGIL 125
WMRVI+ASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + + DRAL NGAQKL G++
Sbjct: 64 WMRVIMASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFGMI 122
Query: 126 IAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLF 185
I IG+AV YVM+GMYG S++GAG +LII+QL AG+IV+ LDELLQKGYGLGSGISLF
Sbjct: 123 ITIGQAVVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLF 182
Query: 186 IATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNI 245
IATNICE+I+WKAFSPTT+N+GRG EFEGA+IALFHLL T+ +KV ALREAFYRQNLPN+
Sbjct: 183 IATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNL 242
Query: 246 TNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLY 305
NL+AT+ VF +V+YFQGF+V LP++S RGQ YPIKLFYTSN+PIILQSALVSNLY
Sbjct: 243 MNLIATIFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSNLY 302
Query: 306 FISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFHAL 363
ISQ+L ++SGNF VNLLG W ++ G + PVGGL YY++ P S + +P HA+
Sbjct: 303 VISQMLSTRFSGNFLVNLLGTWSDTSTGGPARAYPVGGLCYYLSPPESFGTVLEDPIHAI 362
Query: 364 FYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
Y++FML +CA FSKTWIEVSGSSA+DVAKQLK
Sbjct: 363 IYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLK 395
>sp|Q5NVM7|S61A2_PONAB Protein transport protein Sec61 subunit alpha isoform 2 OS=Pongo
abelii GN=SEC61A2 PE=2 SV=1
Length = 476
Score = 540 bits (1392), Expect = e-153, Method: Compositional matrix adjust.
Identities = 268/395 (67%), Positives = 327/395 (82%), Gaps = 3/395 (0%)
Query: 4 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
G + L +++PF LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 2 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 61
Query: 64 FYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLG 123
FYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + + DRAL NGAQKL G
Sbjct: 62 FYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFG 120
Query: 124 ILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGIS 183
++I IG+A+ YVM+GMYG +++GAG +LII+QL AG+IV+ LDELLQKGYGLGSGIS
Sbjct: 121 MIITIGQAIVYVMTGMYGDPAEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 180
Query: 184 LFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLP 243
LFIATNICE+I+WKA SPTTIN+GRG EFEGAVIALFHLL T+ +KV ALREAFYRQNLP
Sbjct: 181 LFIATNICETIVWKASSPTTINTGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLP 240
Query: 244 NITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSN 303
N+ NL+ATV VF +V+YFQGF+V LP++S RGQ +YPIKLFYTSN+PIILQSALVSN
Sbjct: 241 NLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSN 300
Query: 304 LYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFH 361
LY ISQ+L ++SGNF VNLLG+W + G S PVGGL YY++ P S+ + +P H
Sbjct: 301 LYVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAILEDPVH 360
Query: 362 ALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
+ Y++FML +CA FSKTWIEVSGSSA+DVAKQLK
Sbjct: 361 VVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLK 395
>sp|Q8AY33|SC61A_BORSA Protein transport protein Sec61 subunit alpha OS=Boreogadus saida
GN=sec61a PE=2 SV=3
Length = 476
Score = 538 bits (1386), Expect = e-152, Method: Compositional matrix adjust.
Identities = 265/395 (67%), Positives = 325/395 (82%), Gaps = 3/395 (0%)
Query: 4 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
G + L +++PF LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 2 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 61
Query: 64 FYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLG 123
FYWMRVILASNRGT+MELGI+PIVTS L+MQLLAG+KIIEV ++ + DRAL NGAQKL G
Sbjct: 62 FYWMRVILASNRGTLMELGISPIVTSDLIMQLLAGAKIIEVGDSPK-DRALFNGAQKLFG 120
Query: 124 ILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGIS 183
++I IG+A+ YVM+GMYG S++GAG ++II+QL AG+IV+ LDELLQKGYGLGSGIS
Sbjct: 121 MIITIGQAIVYVMTGMYGDPSEMGAGICLVIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 180
Query: 184 LFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLP 243
L IATNICE+I+WKAFSPTT+N+GRG EFEGA+IALFHLL T+ +KV ALREAFYRQNLP
Sbjct: 181 LLIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLP 240
Query: 244 NITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSN 303
N+ NL+ATV VF +V+YFQGF+V LP++S RGQ YPIKLFYTSN+PIILQSALVSN
Sbjct: 241 NLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSN 300
Query: 304 LYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFH 361
LY ISQ+L ++SGNF VNLLG W ++ G + PVGGL Y+++ P S + +P H
Sbjct: 301 LYVISQMLSTRFSGNFIVNLLGTWSDTSTGGPARAYPVGGLCYFLSPPESFGSVLDDPVH 360
Query: 362 ALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
A Y+VFML +CA FSKTWIEVSGSSA+DVAKQLK
Sbjct: 361 AAIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLK 395
>sp|Q8AY34|SC61A_HEMAM Protein transport protein Sec61 subunit alpha OS=Hemitripterus
americanus GN=sec61a PE=2 SV=3
Length = 476
Score = 537 bits (1384), Expect = e-152, Method: Compositional matrix adjust.
Identities = 266/395 (67%), Positives = 323/395 (81%), Gaps = 3/395 (0%)
Query: 4 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
G + L +++PF LPE+Q +RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 2 GIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 61
Query: 64 FYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLG 123
FYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KII V + + DRAL NGAQKL G
Sbjct: 62 FYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIGVGDTPK-DRALFNGAQKLFG 120
Query: 124 ILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGIS 183
++I IG+A+ YVM+GMYG S++GAG +LII+QL AG+IV+ LDELLQKGYGLGSGIS
Sbjct: 121 MIITIGQAIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGIS 180
Query: 184 LFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLP 243
LFIATNICE+I+WKAFSPTT+N+GRG EFEGA+IALFHLL T+ +KV ALRE FYRQNLP
Sbjct: 181 LFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREGFYRQNLP 240
Query: 244 NITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSN 303
N+ NL+ATV VF +V+YFQGF+V LP++S RGQ YPIKLFYTSN+PIILQSALVSN
Sbjct: 241 NLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSN 300
Query: 304 LYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFH 361
LY ISQ+L ++SGNF VNLLG W ++ G + PV GL YY++ P S + +P H
Sbjct: 301 LYVISQMLSTRFSGNFLVNLLGTWSDATSGGPARAYPVAGLCYYLSPPESFGSVLDDPVH 360
Query: 362 ALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
A Y+VFML +CA FSKTWIEVSGSSA+DVAKQLK
Sbjct: 361 AGIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLK 395
>sp|Q5EA68|S61A1_BOVIN Protein transport protein Sec61 subunit alpha isoform 1 OS=Bos
taurus GN=SEC61A1 PE=2 SV=3
Length = 476
Score = 536 bits (1381), Expect = e-151, Method: Compositional matrix adjust.
Identities = 263/395 (66%), Positives = 324/395 (82%), Gaps = 3/395 (0%)
Query: 4 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
G + L +++PF LPE+Q +RKI F+EKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 2 GIKFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADP 61
Query: 64 FYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLG 123
FYWMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + + DRAL NGAQKL G
Sbjct: 62 FYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFG 120
Query: 124 ILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGIS 183
+ I IG+++ YVM+GMYG S++GAG +LI +QL AG+IV+ LDELLQKGYGLGSGIS
Sbjct: 121 MTITIGQSIVYVMTGMYGDPSEMGAGVCLLITIQLFVAGLIVLLLDELLQKGYGLGSGIS 180
Query: 184 LFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLP 243
LFIATNICE+I+WKAFSPTT+N+GRG EFEGA+IALFHLL T+ +KV ALREAFYRQNLP
Sbjct: 181 LFIATNICETIVWKAFSPTTVNTGRGMEFEGAIIALFHLLATRTDKVRALREAFYRQNLP 240
Query: 244 NITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSN 303
N+ NL+AT+ VF +V+YFQGF+V LP++S RGQ YPIKLFYTSN+PIILQSALVSN
Sbjct: 241 NLMNLIATIFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSN 300
Query: 304 LYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFH 361
LY ISQ+L ++SGN V+LLG W ++ G + PVGGL YY++ P S + +P H
Sbjct: 301 LYVISQMLSARFSGNLLVSLLGTWSDTSSGGPARAYPVGGLCYYLSPPESFGSVLEDPVH 360
Query: 362 ALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
A+ Y+VFML +CA FSKTWIEVSGSSA+DVAKQLK
Sbjct: 361 AVVYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLK 395
>sp|P61621|S61A1_RAT Protein transport protein Sec61 subunit alpha isoform 1 OS=Rattus
norvegicus GN=Sec61a1 PE=2 SV=2
Length = 476
Score = 535 bits (1377), Expect = e-151, Method: Compositional matrix adjust.
Identities = 262/393 (66%), Positives = 324/393 (82%), Gaps = 3/393 (0%)
Query: 6 RVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFY 65
+ L +++PF LPE+Q +RKI F+EKV++T I+LFIFLVC Q+PL+GI S+ ADPFY
Sbjct: 4 KFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFY 63
Query: 66 WMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGIL 125
WMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + + DRAL NGAQKL G++
Sbjct: 64 WMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFGMI 122
Query: 126 IAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLF 185
I IG+++ YVM+GMYG S++GAG +LI +QL AG+IV+ LDELLQKGYGLGSGISLF
Sbjct: 123 ITIGQSIVYVMTGMYGDPSEMGAGICLLITIQLFVAGLIVLLLDELLQKGYGLGSGISLF 182
Query: 186 IATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNI 245
IATNICE+I+WKAFSPTT+N+GRG EFEGA+IALFHLL T+ +KV ALREAFYRQNLPN+
Sbjct: 183 IATNICETIVWKAFSPTTVNTGRGMEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNL 242
Query: 246 TNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLY 305
NL+AT+ VF +V+YFQGF+V LP++S RGQ YPIKLFYTSN+PIILQSALVSNLY
Sbjct: 243 MNLIATIFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSNLY 302
Query: 306 FISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFHAL 363
ISQ+L ++SGN V+LLG W ++ G + PVGGL YY++ P S + +P HA+
Sbjct: 303 VISQMLSARFSGNLLVSLLGTWSDTSSGGPARAYPVGGLCYYLSPPESFGSVLEDPVHAV 362
Query: 364 FYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
Y+VFML +CA FSKTWIEVSGSSA+DVAKQLK
Sbjct: 363 VYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLK 395
>sp|Q5R5L5|S61A1_PONAB Protein transport protein Sec61 subunit alpha isoform 1 OS=Pongo
abelii GN=SEC61A1 PE=2 SV=3
Length = 476
Score = 535 bits (1377), Expect = e-151, Method: Compositional matrix adjust.
Identities = 262/393 (66%), Positives = 324/393 (82%), Gaps = 3/393 (0%)
Query: 6 RVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFY 65
+ L +++PF LPE+Q +RKI F+EKV++T I+LFIFLVC Q+PL+GI S+ ADPFY
Sbjct: 4 KFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFY 63
Query: 66 WMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGIL 125
WMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + + DRAL NGAQKL G++
Sbjct: 64 WMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFGMI 122
Query: 126 IAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLF 185
I IG+++ YVM+GMYG S++GAG +LI +QL AG+IV+ LDELLQKGYGLGSGISLF
Sbjct: 123 ITIGQSIVYVMTGMYGDPSEMGAGICLLITIQLFVAGLIVLLLDELLQKGYGLGSGISLF 182
Query: 186 IATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNI 245
IATNICE+I+WKAFSPTT+N+GRG EFEGA+IALFHLL T+ +KV ALREAFYRQNLPN+
Sbjct: 183 IATNICETIVWKAFSPTTVNTGRGMEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNL 242
Query: 246 TNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLY 305
NL+AT+ VF +V+YFQGF+V LP++S RGQ YPIKLFYTSN+PIILQSALVSNLY
Sbjct: 243 MNLIATIFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSNLY 302
Query: 306 FISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFHAL 363
ISQ+L ++SGN V+LLG W ++ G + PVGGL YY++ P S + +P HA+
Sbjct: 303 VISQMLSARFSGNLLVSLLGTWSDTSSGGPARAYPVGGLCYYLSPPESFGSVLEDPVHAV 362
Query: 364 FYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
Y+VFML +CA FSKTWIEVSGSSA+DVAKQLK
Sbjct: 363 VYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLK 395
>sp|P61620|S61A1_MOUSE Protein transport protein Sec61 subunit alpha isoform 1 OS=Mus
musculus GN=Sec61a1 PE=2 SV=2
Length = 476
Score = 535 bits (1377), Expect = e-151, Method: Compositional matrix adjust.
Identities = 262/393 (66%), Positives = 324/393 (82%), Gaps = 3/393 (0%)
Query: 6 RVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFY 65
+ L +++PF LPE+Q +RKI F+EKV++T I+LFIFLVC Q+PL+GI S+ ADPFY
Sbjct: 4 KFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFY 63
Query: 66 WMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGIL 125
WMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + + DRAL NGAQKL G++
Sbjct: 64 WMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFGMI 122
Query: 126 IAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLF 185
I IG+++ YVM+GMYG S++GAG +LI +QL AG+IV+ LDELLQKGYGLGSGISLF
Sbjct: 123 ITIGQSIVYVMTGMYGDPSEMGAGICLLITIQLFVAGLIVLLLDELLQKGYGLGSGISLF 182
Query: 186 IATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNI 245
IATNICE+I+WKAFSPTT+N+GRG EFEGA+IALFHLL T+ +KV ALREAFYRQNLPN+
Sbjct: 183 IATNICETIVWKAFSPTTVNTGRGMEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNL 242
Query: 246 TNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLY 305
NL+AT+ VF +V+YFQGF+V LP++S RGQ YPIKLFYTSN+PIILQSALVSNLY
Sbjct: 243 MNLIATIFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSNLY 302
Query: 306 FISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFHAL 363
ISQ+L ++SGN V+LLG W ++ G + PVGGL YY++ P S + +P HA+
Sbjct: 303 VISQMLSARFSGNLLVSLLGTWSDTSSGGPARAYPVGGLCYYLSPPESFGSVLEDPVHAV 362
Query: 364 FYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
Y+VFML +CA FSKTWIEVSGSSA+DVAKQLK
Sbjct: 363 VYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLK 395
>sp|P61619|S61A1_HUMAN Protein transport protein Sec61 subunit alpha isoform 1 OS=Homo
sapiens GN=SEC61A1 PE=1 SV=2
Length = 476
Score = 535 bits (1377), Expect = e-151, Method: Compositional matrix adjust.
Identities = 262/393 (66%), Positives = 324/393 (82%), Gaps = 3/393 (0%)
Query: 6 RVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFY 65
+ L +++PF LPE+Q +RKI F+EKV++T I+LFIFLVC Q+PL+GI S+ ADPFY
Sbjct: 4 KFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFY 63
Query: 66 WMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGIL 125
WMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + + DRAL NGAQKL G++
Sbjct: 64 WMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFGMI 122
Query: 126 IAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLF 185
I IG+++ YVM+GMYG S++GAG +LI +QL AG+IV+ LDELLQKGYGLGSGISLF
Sbjct: 123 ITIGQSIVYVMTGMYGDPSEMGAGICLLITIQLFVAGLIVLLLDELLQKGYGLGSGISLF 182
Query: 186 IATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNI 245
IATNICE+I+WKAFSPTT+N+GRG EFEGA+IALFHLL T+ +KV ALREAFYRQNLPN+
Sbjct: 183 IATNICETIVWKAFSPTTVNTGRGMEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNL 242
Query: 246 TNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLY 305
NL+AT+ VF +V+YFQGF+V LP++S RGQ YPIKLFYTSN+PIILQSALVSNLY
Sbjct: 243 MNLIATIFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSNLY 302
Query: 306 FISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFHAL 363
ISQ+L ++SGN V+LLG W ++ G + PVGGL YY++ P S + +P HA+
Sbjct: 303 VISQMLSARFSGNLLVSLLGTWSDTSSGGPARAYPVGGLCYYLSPPESFGSVLEDPVHAV 362
Query: 364 FYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
Y+VFML +CA FSKTWIEVSGSSA+DVAKQLK
Sbjct: 363 VYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLK 395
>sp|P38377|S61A1_CANFA Protein transport protein Sec61 subunit alpha isoform 1 OS=Canis
familiaris GN=SEC61A1 PE=1 SV=3
Length = 476
Score = 533 bits (1373), Expect = e-150, Method: Compositional matrix adjust.
Identities = 261/393 (66%), Positives = 324/393 (82%), Gaps = 3/393 (0%)
Query: 6 RVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFY 65
+ L +++PF LPE+Q +RKI F+EKV++T I+LFIFLVC Q+PL+GI S+ ADPFY
Sbjct: 4 KFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFY 63
Query: 66 WMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGIL 125
WMRVILASNRGT+MELGI+PIVTSGL+MQLLAG+KIIEV + + DRAL NGAQKL G++
Sbjct: 64 WMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFGMI 122
Query: 126 IAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLF 185
I IG+++ YVM+GMYG S++GAG +LI +QL AG+IV+ LDELLQKGYGLGSGISLF
Sbjct: 123 ITIGQSIVYVMTGMYGDPSEMGAGICLLITIQLFVAGLIVLLLDELLQKGYGLGSGISLF 182
Query: 186 IATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNI 245
IATNICE+I+WKAFSPTT+N+GRG EFEGA+IALFHLL T+ +KV ALREAFYRQNLPN+
Sbjct: 183 IATNICETIVWKAFSPTTVNTGRGMEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNL 242
Query: 246 TNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLY 305
NL+AT+ VF +V+YFQGF+V LP++S RGQ YPIKLFYTSN+PIILQSALVSNLY
Sbjct: 243 MNLIATIFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSNLY 302
Query: 306 FISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFHAL 363
ISQ+L ++SGN V+LLG W ++ G + PVGGL +Y++ P S + +P HA+
Sbjct: 303 VISQMLSARFSGNLLVSLLGTWSDTSSGGPARAYPVGGLCHYLSPPESFGSVLEDPVHAV 362
Query: 364 FYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
Y+VFML +CA FSKTWIEVSGSSA+DVAKQLK
Sbjct: 363 VYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLK 395
>sp|Q25147|SC61A_HALRO Protein transport protein Sec61 subunit alpha OS=Halocynthia
roretzi PE=2 SV=1
Length = 475
Score = 521 bits (1343), Expect = e-147, Method: Compositional matrix adjust.
Identities = 263/395 (66%), Positives = 319/395 (80%), Gaps = 4/395 (1%)
Query: 4 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
GF+ L +++PF LPE++ RKI FREKV++T I+LFIFLVC Q+PL+GI S+ ADP
Sbjct: 2 GFKFLEVIKPFCIILPEIEKPQRKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSESADP 61
Query: 64 FYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLG 123
FYWMRVI+ASNRGT+MELGITPIVTSGL+MQLLAG+K+IEV + + DRAL NGAQKL G
Sbjct: 62 FYWMRVIMASNRGTLMELGITPIVTSGLIMQLLAGAKLIEVGDTPK-DRALFNGAQKLFG 120
Query: 124 ILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGIS 183
++I IG+AV YVM+GMYG S +GAG +LII+QL A +IV+ LDELLQKGYGLGSGIS
Sbjct: 121 MIITIGQAVVYVMTGMYGDPSDMGAGICLLIIIQLFIASLIVLLLDELLQKGYGLGSGIS 180
Query: 184 LFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLP 243
LFIATNICE+I+WK+FSP T+N+GRG EFEGAVIALFHLL T+ +KV ALREAFYR NLP
Sbjct: 181 LFIATNICETIVWKSFSPATVNTGRGTEFEGAVIALFHLLATRSDKVRALREAFYRPNLP 240
Query: 244 NITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSN 303
N+ NL AT+LVF IV+YFQGF+V LP++S RGQ +YPIKLFYTSN+PIILQSALVS
Sbjct: 241 NLMNLSATILVFGIVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSG 300
Query: 304 LYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFH 361
LY ISQ+L ++ GNFF+ LLG W++ E G S PV L YY++ P S M +P H
Sbjct: 301 LYVISQMLAIRFRGNFFIGLLGVWEDVEGGGPARSYPV-ALCYYLSPPESFFSMFLDPIH 359
Query: 362 ALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
L Y+ FML +CA FSKTWIEVSGS+A+DVAKQLK
Sbjct: 360 GLLYITFMLGSCAFFSKTWIEVSGSAAKDVAKQLK 394
>sp|Q870W0|SC61A_NEUCR Protein transport protein SEC61 subunit alpha OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=sec-61 PE=3 SV=1
Length = 476
Score = 514 bits (1325), Expect = e-145, Method: Compositional matrix adjust.
Identities = 244/392 (62%), Positives = 308/392 (78%)
Query: 5 FRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPF 64
R L LV+PF+PFLPEVQ + KIPF +K+++T ++L IFLV SQ+PLYGI S+ +DP
Sbjct: 4 LRFLDLVKPFVPFLPEVQQPETKIPFNQKLMWTGLTLLIFLVMSQMPLYGIVSSDTSDPL 63
Query: 65 YWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGI 124
YW+R+++ASNRGT+MELGITPI++SG+V QLLAG+ +I+V+ +++ DR L AQKL +
Sbjct: 64 YWLRMMMASNRGTLMELGITPIISSGMVFQLLAGTHMIDVNLDLKADRELYQTAQKLFAV 123
Query: 125 LIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISL 184
+++IG A YV +G+YG S LGAG L+ILQL AG+IVI LDELLQKGYGLGSGISL
Sbjct: 124 ILSIGTATVYVFTGLYGPPSDLGAGIVFLLILQLVVAGMIVILLDELLQKGYGLGSGISL 183
Query: 185 FIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPN 244
FIATNICESI+WKAFSPT+IN+GRG E+EGAVIALFHLL+T NK AL EAFYRQNLPN
Sbjct: 184 FIATNICESIMWKAFSPTSINTGRGPEYEGAVIALFHLLMTWDNKQRALYEAFYRQNLPN 243
Query: 245 ITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNL 304
I NLLAT++VF V+Y QGF+V +PV+S RG +G+YPI+LFYTSNMPI+LQSAL SN+
Sbjct: 244 IMNLLATLVVFAAVIYLQGFRVEIPVKSSRQRGARGSYPIRLFYTSNMPIMLQSALSSNV 303
Query: 305 YFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALF 364
+ ISQ+LY ++S N V L G W+ E + V GL YY++ P + D +P H
Sbjct: 304 FLISQMLYSRFSENLLVRLFGVWEAKEGTAQLSAVSGLVYYMSPPLNFKDALLDPIHTAV 363
Query: 365 YLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
Y+ +MLTACA+FSKTWIEVSGSS RDVAKQLK
Sbjct: 364 YIAYMLTACAVFSKTWIEVSGSSPRDVAKQLK 395
>sp|Q96TW8|SC61A_HANAN Protein transport protein SEC61 subunit alpha OS=Hansenula anomala
GN=SEC61 PE=3 SV=1
Length = 479
Score = 483 bits (1243), Expect = e-135, Method: Compositional matrix adjust.
Identities = 230/392 (58%), Positives = 297/392 (75%)
Query: 5 FRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPF 64
FRVL LV+P +LPEV + +RK+PF +K+++T ++L IFLV S++PLYGI S+ +DP
Sbjct: 4 FRVLDLVKPLTGYLPEVIAPERKVPFNQKLMWTGVTLLIFLVMSEIPLYGIVSSESSDPL 63
Query: 65 YWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGI 124
+W+R++LASNRGT+MELGI+PIV+SG+V QLL G+++++V+ + DR AQKL I
Sbjct: 64 FWLRMMLASNRGTLMELGISPIVSSGMVFQLLQGTQLLDVNLESKTDRETFQTAQKLFAI 123
Query: 125 LIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISL 184
L++IG+A YV++G+YG S LG G +L+ILQL FAGIIVI LDELLQKGYGLGSGISL
Sbjct: 124 LLSIGQATVYVLTGIYGRPSDLGVGVCLLLILQLVFAGIIVILLDELLQKGYGLGSGISL 183
Query: 185 FIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPN 244
F+ATNICE I WKAF+PTT+N+GRG EFEGAV+ALFHLL +++K AL EAFYRQNLPN
Sbjct: 184 FMATNICEQIFWKAFAPTTVNNGRGDEFEGAVVALFHLLSVRKDKRRALVEAFYRQNLPN 243
Query: 245 ITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNL 304
I LLAT +VF +VVY QGF+ +PVRS RGQ G YPIKLFYTSN PI+LQSAL SN
Sbjct: 244 IFQLLATFIVFFLVVYLQGFRYEIPVRSTRQRGQNGLYPIKLFYTSNTPIMLQSALTSNF 303
Query: 305 YFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALF 364
+ ISQ+L++++ N V L G W S GLAYY+ P SL + +P +
Sbjct: 304 FIISQMLFQRFPLNPVVRLFGVWDARPGSAQLFASNGLAYYIQPPLSLTEALLDPIKTVI 363
Query: 365 YLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
Y+ F+L+ CALFSKTWIE+SG++ RDVAKQ K
Sbjct: 364 YVSFVLSVCALFSKTWIEISGTAPRDVAKQFK 395
>sp|P78979|SC61A_YARLI Protein transport protein SEC61 subunit alpha OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=SEC61 PE=3 SV=2
Length = 471
Score = 483 bits (1242), Expect = e-135, Method: Compositional matrix adjust.
Identities = 221/394 (56%), Positives = 297/394 (75%)
Query: 3 GGFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGAD 62
G R L LV+PF PFLPEVQ+ +RK+PF +K+++T ++L IFLV S++PLYGI+S+ +D
Sbjct: 2 AGVRFLDLVKPFTPFLPEVQAPERKVPFNQKIMWTAVTLMIFLVMSEIPLYGINSSDKSD 61
Query: 63 PFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLL 122
YW+R++LASNRG++MELGITPIV+SG+V QLL G+++IEV+ +++ DR L AQKL
Sbjct: 62 ALYWLRMMLASNRGSLMELGITPIVSSGMVFQLLGGTQLIEVNMDLKSDRELYQTAQKLF 121
Query: 123 GILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGI 182
I++++G+A YV++GMYG LG G +L+I QL A ++VI LDELLQKGYGLGSGI
Sbjct: 122 AIILSLGQATVYVLTGMYGPPKDLGVGVCLLLIFQLVLAALVVILLDELLQKGYGLGSGI 181
Query: 183 SLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNL 242
SLFIATNICE I WKAF+PTT+N GRG EFEGA++A HLL T+++K A+ EAF RQ+L
Sbjct: 182 SLFIATNICEQIFWKAFAPTTVNKGRGYEFEGAIVAFVHLLFTRKDKKRAIIEAFTRQDL 241
Query: 243 PNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVS 302
PN++ L+ TV +F V+Y QGF+V +PV+S RG G +PIKLFYTSN+PI+LQSAL S
Sbjct: 242 PNMSQLVTTVAIFAAVIYLQGFRVDIPVKSSKQRGPYGVFPIKLFYTSNLPIMLQSALTS 301
Query: 303 NLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHA 362
N++ ISQ+L++K+ N V LLG W E PV G+AYY+ P + + A+P
Sbjct: 302 NIFIISQMLFKKFPTNVLVRLLGVWDGREGMQQLFPVSGIAYYMQPPFNAKEALADPVKT 361
Query: 363 LFYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
+ Y+ F+L CA+FS TWIE+SGSS RDVAKQ K
Sbjct: 362 VIYIAFVLGVCAVFSATWIEISGSSPRDVAKQFK 395
>sp|Q9P8E3|SC61A_CANAL Protein transport protein SEC61 subunit alpha OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=SEC61 PE=3 SV=2
Length = 479
Score = 479 bits (1234), Expect = e-134, Method: Compositional matrix adjust.
Identities = 226/393 (57%), Positives = 295/393 (75%)
Query: 4 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
GFRVL LV+PF PFLPEV + +RK+ F+++V++T+I+L IFLV S++PLYGI S+ +DP
Sbjct: 3 GFRVLDLVKPFSPFLPEVIAPERKVQFQQRVMWTIITLLIFLVMSEIPLYGIASSDSSDP 62
Query: 64 FYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLG 123
+W+R++LASNRGT+MELGI+PIV+SG++ QLL G+KII VD + DR AQKLL
Sbjct: 63 LFWLRMMLASNRGTLMELGISPIVSSGMLFQLLQGTKIIHVDMQNKNDRETFQTAQKLLA 122
Query: 124 ILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGIS 183
IL+A+G+A YV++GMYG S LG G L+ILQL FA IVI LDELLQKGYGLGSG+S
Sbjct: 123 ILLAVGQATVYVLTGMYGPPSSLGVGVCSLLILQLVFASTIVILLDELLQKGYGLGSGVS 182
Query: 184 LFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLP 243
LF ATN CE + WKAF+PTT S +G EF+GAV+A+FHLL ++++K AL E+FYR NLP
Sbjct: 183 LFTATNTCEQVFWKAFAPTTSTSAKGTEFDGAVVAMFHLLGSRKDKKRALIESFYRPNLP 242
Query: 244 NITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSN 303
N+ LLAT+LVF VVY QGF++ LP++S RG G+YPI+LFYTSN+PI+L+SAL SN
Sbjct: 243 NMFQLLATLLVFFAVVYLQGFRIELPMKSTRQRGPYGSYPIRLFYTSNIPIMLESALASN 302
Query: 304 LYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHAL 363
++ ISQLL+ ++ N FV LLG W S GGLAYY+ P + D +P
Sbjct: 303 IFIISQLLFMRWPNNLFVKLLGTWDARAGSSQLYANGGLAYYIQPPFNFTDALLDPIKTT 362
Query: 364 FYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
Y+ F+L +CA+FS TWIE+SG+S RDVAKQ K
Sbjct: 363 IYIAFVLGSCAVFSTTWIEISGTSPRDVAKQFK 395
>sp|Q6BN08|SC61A_DEBHA Protein transport protein SEC61 subunit alpha OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=SEC61 PE=3 SV=1
Length = 479
Score = 476 bits (1226), Expect = e-133, Method: Compositional matrix adjust.
Identities = 225/393 (57%), Positives = 303/393 (77%)
Query: 4 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADP 63
GFRVL LV+PF PF+PEV + +RK+ F++++++T ++L IFLV S++PLYGI S+ G+DP
Sbjct: 3 GFRVLDLVKPFTPFMPEVIAPERKVAFQQRLMWTGVTLLIFLVMSEIPLYGIASSDGSDP 62
Query: 64 FYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLG 123
YW+R++LASNRGT+MELGI+PIV++G+V QLL G+K+I VD + + DR AQKL
Sbjct: 63 LYWLRMMLASNRGTLMELGISPIVSAGMVFQLLQGTKLITVDMSNKNDRDQFQTAQKLFA 122
Query: 124 ILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGIS 183
IL+A+G+A YV++GMYG S LG G +L++LQL FAGI+VI LDELLQKGYGLGSGIS
Sbjct: 123 ILLAVGQATVYVLTGMYGPPSSLGTGVCLLLVLQLVFAGIVVILLDELLQKGYGLGSGIS 182
Query: 184 LFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLP 243
LF ATN+CE + WKAF+PTT N G+G EFEGAV+ALFHLL ++++K AL EAFYR +LP
Sbjct: 183 LFTATNVCEQVFWKAFAPTTSNIGKGTEFEGAVVALFHLLGSRKDKKRALLEAFYRSHLP 242
Query: 244 NITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSN 303
N+ L+ATV VFL+VVY QGF++ LP++S RG G YPI+LFYTSN+PI+LQSAL SN
Sbjct: 243 NMFQLIATVFVFLLVVYLQGFRIELPIKSTRQRGPYGLYPIRLFYTSNIPIMLQSALSSN 302
Query: 304 LYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHAL 363
++ ISQ+L+ ++ N FV +LG W + + V GLAYY+ P S + +P +
Sbjct: 303 IFIISQMLFVRWPNNIFVKILGSWDTRQGAAQLYAVSGLAYYIQPPLSFTEALLDPIKTI 362
Query: 364 FYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
Y++F+L +CA+FS TWIE+SG+S RDVAKQ K
Sbjct: 363 IYIIFVLGSCAVFSTTWIEISGASPRDVAKQFK 395
>sp|Q752H7|SC61A_ASHGO Protein transport protein SEC61 subunit alpha OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=SEC61 PE=3 SV=1
Length = 480
Score = 455 bits (1170), Expect = e-127, Method: Compositional matrix adjust.
Identities = 217/394 (55%), Positives = 294/394 (74%), Gaps = 4/394 (1%)
Query: 6 RVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFY 65
R+L L +PF FLPEV + +RK+P+ +K+I+T +SL IFLV Q+PLYGI S+ G+DP
Sbjct: 4 RLLDLFKPFEAFLPEVIAPERKVPYNQKLIWTAVSLLIFLVLGQIPLYGIVSSEGSDPLQ 63
Query: 66 WMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGIL 125
W+R +LASNRGT+MELG++PI+TS ++ Q L G+++++V+ ++DR L AQK+ I+
Sbjct: 64 WLRAMLASNRGTLMELGVSPIITSSMIFQFLQGTQLLQVNLESKQDRELFQIAQKVCAIV 123
Query: 126 IAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLF 185
+ +G+A+ V++G YGSVS LG ++L+ILQL FA IV+ LDELL KGYGLGSGISLF
Sbjct: 124 LTLGQAIVVVLTGNYGSVSNLGIAISLLLILQLVFASFIVLLLDELLIKGYGLGSGISLF 183
Query: 186 IATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNI 245
ATNI E I WKAF+PTT+N+GRG EFEGAV+ALFHLL +++K AL EAFYR LPN+
Sbjct: 184 TATNIAEQIFWKAFAPTTVNNGRGTEFEGAVVALFHLLSVRKDKKRALVEAFYRDYLPNM 243
Query: 246 TNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLY 305
+L+TV VFL V+Y QGF+ LPVRS RGQ G+YPIKLFYTSN PI+LQSAL SN++
Sbjct: 244 FQVLSTVFVFLFVLYLQGFRYELPVRSTRTRGQVGSYPIKLFYTSNTPIMLQSALTSNIF 303
Query: 306 FISQLLYRKYSGNFFVNLLGKW---KESEYSGHSIPVGGLAYYVTAPASLADMAANPFHA 362
SQLLY+K+ N V +LG W ++ YS ++ + GL+YY+ P S + +P
Sbjct: 304 LTSQLLYQKFPNNPIVKMLGVWGTRSDAPYSPNA-AISGLSYYIQPPFSFTEALLDPIKT 362
Query: 363 LFYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
+ Y+ F+L ACA+FS+TWI+VSG+S RDV+KQ K
Sbjct: 363 VVYVTFVLGACAMFSRTWIDVSGTSPRDVSKQFK 396
>sp|Q6FRY3|SC61A_CANGA Protein transport protein SEC61 subunit alpha OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=SEC61 PE=3 SV=1
Length = 479
Score = 453 bits (1165), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/392 (55%), Positives = 286/392 (72%), Gaps = 1/392 (0%)
Query: 6 RVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFY 65
R+L L +PF FLPEV S +RK+P+ +K+I+T +SL IFLV Q+PLYGI S +DP Y
Sbjct: 4 RILSLFKPFEAFLPEVISPERKVPYNQKLIWTGVSLLIFLVLGQIPLYGIVSAETSDPLY 63
Query: 66 WMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGIL 125
W+R +LASNRGT+MELG++PI+TS ++ Q L G+++++V + +EDR L AQK+ I+
Sbjct: 64 WLRAMLASNRGTLMELGVSPIITSSMIFQFLQGTQLLQVSLDSKEDRELYQIAQKVCAII 123
Query: 126 IAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLF 185
+ G+A+ VM+G YGS S LG ++L+I QL FA IV+ LDELL KGYGLGSGISLF
Sbjct: 124 LTFGQALVVVMTGNYGSPSDLGIAISLLLIFQLMFASFIVLLLDELLTKGYGLGSGISLF 183
Query: 186 IATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNI 245
ATNI E+I WKAF+PTT+NSGRG EFEGAVIA FHLL +++K AL EAFYR+NLPN+
Sbjct: 184 TATNIAENIFWKAFAPTTVNSGRGKEFEGAVIAFFHLLAVRKDKKRALVEAFYRENLPNM 243
Query: 246 TNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLY 305
++ATV VFL V+Y QGF+ LPV+S RGQ YPIKLFYTSN PI+LQSAL SN++
Sbjct: 244 FQVIATVFVFLFVLYLQGFRYELPVKSTKVRGQMAIYPIKLFYTSNTPIMLQSALSSNIF 303
Query: 306 FISQLLYRKYSGNFFVNLLGKWK-ESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALF 364
ISQ+L++KY N + L G W +G +P+ G++YY+ SL +P +
Sbjct: 304 LISQILFQKYPSNPVIRLFGVWGIRPGTNGPQVPLSGISYYLQPIGSLKMALLDPIKTVI 363
Query: 365 YLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
Y F+L CALFSKTWIE+SG+SA+DVAKQ K
Sbjct: 364 YTAFVLGTCALFSKTWIEISGTSAKDVAKQFK 395
>sp|Q6CPY9|SC61A_KLULA Protein transport protein SEC61 subunit alpha OS=Kluyveromyces
lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
1267 / NRRL Y-1140 / WM37) GN=SEC61 PE=3 SV=1
Length = 480
Score = 452 bits (1164), Expect = e-126, Method: Compositional matrix adjust.
Identities = 214/393 (54%), Positives = 290/393 (73%), Gaps = 2/393 (0%)
Query: 6 RVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFY 65
RVL L +PF +LPEV + +R +P+++K+I+T +SL +FLV Q+PLYGI S+ +DP Y
Sbjct: 4 RVLDLFKPFEAYLPEVIAPERPVPYKQKLIWTGVSLLVFLVLGQIPLYGIVSSETSDPLY 63
Query: 66 WMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGIL 125
W+R +LASNRGT+MELG++PI+TS ++ Q L G+++++V+ ++DR L AQK+ IL
Sbjct: 64 WLRAMLASNRGTLMELGVSPIITSSMIFQFLQGTQLLQVNMENKQDRELYQIAQKVFAIL 123
Query: 126 IAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLF 185
+ G+A+ V++G YG S LG ++L+I QL FA V+ LDELL KGYGLGSGISLF
Sbjct: 124 LTFGQAIVVVLTGNYGKPSDLGLAISLLLIFQLIFASFTVLLLDELLSKGYGLGSGISLF 183
Query: 186 IATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNI 245
ATNI E I WKAF+PTT+N GRG EFEGAVIALFHLL +++K AL EAFYR+NLPN+
Sbjct: 184 TATNIAEQITWKAFAPTTVNVGRGQEFEGAVIALFHLLAIRKDKKRALVEAFYRENLPNM 243
Query: 246 TNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLY 305
+ +T+ VFL V+Y QGF+ LP++S RGQ G+YPIKLFYTSN PI+LQSAL SN++
Sbjct: 244 FQVFSTIGVFLSVLYLQGFRYELPIKSTRTRGQYGSYPIKLFYTSNTPIMLQSALTSNIF 303
Query: 306 FISQLLYRKYSGNFFVNLLGKW--KESEYSGHSIPVGGLAYYVTAPASLADMAANPFHAL 363
ISQ+LY+++S N V LLG W + +G + + GL+YY+ P S+ D +P +
Sbjct: 304 LISQILYQRFSTNPLVKLLGVWGTRAGAPAGQQVALSGLSYYIQPPFSVTDALLDPIKTV 363
Query: 364 FYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
Y+ F+L ACALFSKTWIE+SG+S RDVAKQ K
Sbjct: 364 VYVGFVLGACALFSKTWIEISGTSPRDVAKQFK 396
>sp|P32915|SC61A_YEAST Protein transport protein SEC61 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SEC61 PE=1 SV=1
Length = 480
Score = 446 bits (1146), Expect = e-124, Method: Compositional matrix adjust.
Identities = 211/392 (53%), Positives = 287/392 (73%), Gaps = 1/392 (0%)
Query: 6 RVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFY 65
RVL L +PF FLPEV + +RK+P+ +K+I+T +SL IFL+ Q+PLYGI S+ +DP Y
Sbjct: 5 RVLDLFKPFESFLPEVIAPERKVPYNQKLIWTGVSLLIFLILGQIPLYGIVSSETSDPLY 64
Query: 66 WMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGIL 125
W+R +LASNRGT++ELG++PI+TS ++ Q L G++++++ ++DR L AQK+ I+
Sbjct: 65 WLRAMLASNRGTLLELGVSPIITSSMIFQFLQGTQLLQIRPESKQDRELFQIAQKVCAII 124
Query: 126 IAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLF 185
+ +G+A+ VM+G YG+ S LG +L+I QL FA +IV+ LDELL KGYGLGSGISLF
Sbjct: 125 LILGQALVVVMTGNYGAPSDLGLPICLLLIFQLMFASLIVMLLDELLSKGYGLGSGISLF 184
Query: 186 IATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNI 245
ATNI E I W+AF+PTT+NSGRG EFEGAVIA FHLL +++K AL EAFYR NLPN+
Sbjct: 185 TATNIAEQIFWRAFAPTTVNSGRGKEFEGAVIAFFHLLAVRKDKKRALVEAFYRTNLPNM 244
Query: 246 TNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLY 305
+L TV +FL V+Y QGF+ LP+RS RGQ G YPIKLFYTSN PI+LQSAL SN++
Sbjct: 245 FQVLMTVAIFLFVLYLQGFRYELPIRSTKVRGQIGIYPIKLFYTSNTPIMLQSALTSNIF 304
Query: 306 FISQLLYRKYSGNFFVNLLGKWK-ESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALF 364
ISQ+L++KY N + L+G W G + + GLAYY+ SL++ +P +
Sbjct: 305 LISQILFQKYPTNPLIRLIGVWGIRPGTQGPQMALSGLAYYIQPLMSLSEALLDPIKTIV 364
Query: 365 YLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
Y+ F+L +CA+FSKTWIE+SG+S RD+AKQ K
Sbjct: 365 YITFVLGSCAVFSKTWIEISGTSPRDIAKQFK 396
>sp|P79088|SC61A_SCHPO Protein transport protein sec61 subunit alpha
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=sec61 PE=2 SV=1
Length = 479
Score = 417 bits (1072), Expect = e-116, Method: Compositional matrix adjust.
Identities = 218/398 (54%), Positives = 290/398 (72%), Gaps = 14/398 (3%)
Query: 6 RVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFY 65
R L LV+PF PFLPE+ + +RK+PF++K+++T ++L IFLV SQ+PLYGI S+ +DP
Sbjct: 5 RFLDLVKPFAPFLPEIAAPERKVPFKQKMLWTGVTLLIFLVMSQVPLYGIVSSDSSDPLL 64
Query: 66 WMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGIL 125
W+R+ILA+NRGT+MELGI+PIVTS +++QLL GS++IEV+ ++ DR + QK L I+
Sbjct: 65 WLRMILAANRGTLMELGISPIVTSSMLVQLLVGSQLIEVNMELKSDREMYQLVQKFLAII 124
Query: 126 IAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLF 185
IA G+A AYV++GMYG LGAG +L+ILQL A +IV+ LDELLQKGYGLGSGISLF
Sbjct: 125 IAFGQATAYVLTGMYGRPQDLGAGICLLLILQLAAASLIVLLLDELLQKGYGLGSGISLF 184
Query: 186 IATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQ----- 240
IAT CE+I WKAFSPTT + G +FEGAVI +++ T NK AL +AF+R
Sbjct: 185 IATINCENIFWKAFSPTTYHIANGVQFEGAVINFVYVMFTWDNKAAALYQAFFRSGLTSS 244
Query: 241 --NLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQS 298
LPN+ N AT+LVF +V+Y Q F+V +P+RS+ RG + +P+KL YTSN PI+LQS
Sbjct: 245 QIQLPNLWNFFATLLVFGVVIYLQDFRVEIPIRSQKFRGYRSTFPVKLLYTSNTPIMLQS 304
Query: 299 ALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAAN 358
AL SNL+F S+LL+ ++S NF V LG W+++ S GL+YY++ PAS D +
Sbjct: 305 ALTSNLFFASRLLFNRFSSNFLVRFLGVWEQTATS-------GLSYYLSPPASFQDALID 357
Query: 359 PFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
P H L Y+ F + ACALFSK WIEVSG+S RDVAKQLK
Sbjct: 358 PIHTLVYVFFTMFACALFSKLWIEVSGASPRDVAKQLK 395
>sp|Q9V1V8|SECY_PYRAB Protein translocase subunit SecY OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=secY PE=3 SV=1
Length = 468
Score = 229 bits (583), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 141/388 (36%), Positives = 222/388 (57%), Gaps = 26/388 (6%)
Query: 17 FLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRG 76
+ PEV+ + +P +EK ++T ++L ++ V +++P+YGI D F ++RV+LA G
Sbjct: 13 WFPEVERPKKHVPLKEKFMWTGLALILYYVLAEIPVYGIPERI-QDYFQFLRVVLAGRNG 71
Query: 77 TVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVM 136
+++ LGI PIVT+G+++QLL GS+II++D EDR Q++ + + EA +V+
Sbjct: 72 SILTLGIGPIVTAGIILQLLVGSEIIKLDLANPEDRRFYQALQRVFSVFMCFLEAAIWVL 131
Query: 137 SGMYGSVS-QLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESII 195
G +G V + A L+ILQL F GII+I LDEL+ K +G+GSGISLFIA + + I+
Sbjct: 132 GGAFGRVGVDVTYAIAALMILQLAFGGIILIVLDELVSK-WGIGSGISLFIAAGVSQRIL 190
Query: 196 WKAFSPTT----INSGRGAEFEGAVIALFHLLITKQNKVGALREAFYR-QNLPNITNLLA 250
++ +P T I+ G I F I K G L+ A YR P++ ++A
Sbjct: 191 TRSLNPLTDPNIIDPLTGKPAIVGAIPYFIQHILK----GDLKGALYRGGTAPDMMAVIA 246
Query: 251 TVLVFLIVVYFQGFKVVLPV--RSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFIS 308
T++VFL+VVYF+ +V +P+ R RG+ YPI+ Y SN+PIIL AL +N+ +
Sbjct: 247 TIIVFLVVVYFESMRVEIPLGYRGVTIRGR---YPIRFLYVSNIPIILTFALYANIQLWA 303
Query: 309 QLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVF 368
++L R L W + PVGG YV P S+ + NP AL YL+
Sbjct: 304 RVLDR---------LGHPWLGTFDPTTGNPVGGFVLYVIPPRSIFTVIDNPVRALVYLIL 354
Query: 369 MLTACALFSKTWIEVSGSSARDVAKQLK 396
+ + +F W+E++G AR +A+QL+
Sbjct: 355 TVISSLIFGFLWVELTGLDARTIARQLQ 382
>sp|Q8U019|SECY_PYRFU Protein translocase subunit SecY OS=Pyrococcus furiosus (strain
ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=secY PE=1
SV=1
Length = 468
Score = 226 bits (576), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 136/386 (35%), Positives = 227/386 (58%), Gaps = 22/386 (5%)
Query: 17 FLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRG 76
+ PEV+ R++P RE+ ++T ++L ++ V +++P+YGI D F ++RV+LA G
Sbjct: 13 WFPEVERPKRRVPLRERFMWTGVALILYYVLAEIPVYGIPERI-QDYFQFLRVVLAGRNG 71
Query: 77 TVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVM 136
+++ LGI PIVT+G+++QLL GS+II++D EDR Q++ + + EA +++
Sbjct: 72 SILTLGIGPIVTAGIILQLLVGSEIIKLDLANPEDRRFYQALQRVFSVFMCFFEAAVWIL 131
Query: 137 SGMYGSVS-QLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESII 195
G +G V + A+L+ILQL GI++I LDEL+ K +G+GSGISLFIA + ++I+
Sbjct: 132 GGAFGRVGVDVTYAIAVLMILQLAMGGIVLIILDELVSK-WGIGSGISLFIAAGVSQTIL 190
Query: 196 WKAFSPTT----INSGRGAEFEGAVIALFHLLITKQNKVGALREAFYR-QNLPNITNLLA 250
++ +P T I+ G I F I K G L A YR + P++ +++A
Sbjct: 191 TRSLNPLTDPNIIDPLTGQPAIVGAIPYFIQHILK----GDLWGAIYRGGSAPDMLSVVA 246
Query: 251 TVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQL 310
T++VF IVVYF+ +V +P+ + +G+YPI+ Y SN+PIIL AL +N+ +++
Sbjct: 247 TIVVFFIVVYFESMRVEIPLGYRGVT-VRGSYPIRFLYVSNIPIILTFALYANIQLWARV 305
Query: 311 LYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFML 370
L R G+ LG++ + S P+ G YV P ++ + NP A+ YL+ +
Sbjct: 306 LDRL--GH---PWLGRFDPTTGS----PISGFVLYVIPPRNIFSVIDNPVRAIVYLILTV 356
Query: 371 TACALFSKTWIEVSGSSARDVAKQLK 396
LF W+E++G AR +A+QL+
Sbjct: 357 IFSLLFGYLWVELTGLDARSIARQLQ 382
>sp|O26134|SECY_METTH Protein translocase subunit SecY OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=secY PE=3 SV=1
Length = 456
Score = 226 bits (576), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 144/388 (37%), Positives = 219/388 (56%), Gaps = 31/388 (7%)
Query: 12 RPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVIL 71
P LP+V+S ++PFREK+ +T I L ++ +Q+PLYG+ S D F R +L
Sbjct: 9 EPLFSVLPQVKSPGYRVPFREKLKWTGIILVLYFFLAQIPLYGL-SANAVDQFAQFRAVL 67
Query: 72 ASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEA 131
A N G+++ LGI PIV++ +++QLL G KI+++D + ED+A G QKLL I+ EA
Sbjct: 68 AGNFGSILTLGIGPIVSASIILQLLVGGKILKLDLSRHEDKAFFQGLQKLLAIVFTFFEA 127
Query: 132 VAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNIC 191
+ +V++ GS++ ++ILQL GI++I LDE++ K +G GSG+ LFIA +
Sbjct: 128 LIFVLT---GSLAPSAPQFVWVLILQLTIGGILIIFLDEVVSK-WGFGSGVGLFIAAGVS 183
Query: 192 ESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLAT 251
+ II AF+P + + G G + +LL T Q+ F LP +LA
Sbjct: 184 QEIIVGAFNPLSAPTQPGVP-AGRITGFLYLLFTGQSP------DFQYYVLP----VLAL 232
Query: 252 VLVFLIVVYFQGFKVVLPVR----SKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFI 307
+ VFL+VVY + +V +P+ + +RG G YP++ Y SNMP+IL SAL+ N+
Sbjct: 233 IAVFLVVVYAESMRVEIPISMGGGKRLSRGAVGKYPLRFIYASNMPVILTSALLLNV--- 289
Query: 308 SQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLV 367
QLL N F L + +G + V GLAY +TAP S+ + +PF +FY V
Sbjct: 290 -QLL-----ANVFQKLGYPILGTVSNGQA--VDGLAYLLTAPRSIDALILDPFRVVFYAV 341
Query: 368 FMLTACALFSKTWIEVSGSSARDVAKQL 395
+ C LF+ W+E+S R VA+QL
Sbjct: 342 VFIGLCVLFAWLWVEISNIGPRHVARQL 369
>sp|O59442|SECY_PYRHO Protein translocase subunit SecY OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=secY PE=3 SV=1
Length = 468
Score = 221 bits (564), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 139/390 (35%), Positives = 225/390 (57%), Gaps = 30/390 (7%)
Query: 17 FLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRG 76
+ PEV+ + +P +EK ++T ++L ++ V +++P+YGI D F ++RV+LA G
Sbjct: 13 WFPEVERPKKHVPLKEKFVWTGLALVLYYVLAEIPVYGIPKKI-QDYFQFLRVVLAGRNG 71
Query: 77 TVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVM 136
+++ LGI PIVT+G+++QLL GS++I +D EDR Q++ + + EA +V+
Sbjct: 72 SILTLGIGPIVTAGIILQLLVGSELIRLDLANPEDRRFYQALQRVFSVFMCFFEAAIWVL 131
Query: 137 SGMYGSVS-QLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESII 195
G +G V + A L+I+QL GII+I LDEL+ K +G+GSGISLFIA + + I+
Sbjct: 132 GGAFGRVGVDVTYTIATLMIIQLALGGIILIVLDELVSK-WGIGSGISLFIAAGVSQRIL 190
Query: 196 WKAFSPTT----INSGRGAEFEGAVIALF--HLLITKQNKVGALREAFYR-QNLPNITNL 248
++ +P T I+ G I F H+L G L+ A YR + P++ +
Sbjct: 191 TRSLNPLTDPNIIDPLTGKPAIVGAIPYFIQHIL------DGDLKGALYRGGSAPDMIAV 244
Query: 249 LATVLVFLIVVYFQGFKVVLPV--RSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYF 306
AT++VFL+VVYF+ +V +P+ R RG+ YPIK Y SN+PIIL AL +N+
Sbjct: 245 TATIIVFLVVVYFESMRVEIPLGYRGVTIRGR---YPIKFLYVSNIPIILTFALYANIQL 301
Query: 307 ISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYL 366
+++L R F LG++ +G+ P+GG YV P ++ + NP A+ YL
Sbjct: 302 WARVLDR-----FGHPWLGRF--DPVTGN--PIGGFVLYVIPPRNIFTVIDNPVRAIIYL 352
Query: 367 VFMLTACALFSKTWIEVSGSSARDVAKQLK 396
+ + LF W+E++G AR +A+QL+
Sbjct: 353 ILTIIFSLLFGFLWVELTGLDARTIARQLQ 382
>sp|Q60175|SECY_METJA Protein translocase subunit SecY OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=secY PE=1 SV=2
Length = 436
Score = 216 bits (550), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 135/386 (34%), Positives = 217/386 (56%), Gaps = 45/386 (11%)
Query: 13 PFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILA 72
P L +PEV+ ++I F+EK+ +T I L ++ + + +Y + A +W + I A
Sbjct: 6 PILEKIPEVELPVKEITFKEKLKWTGIVLVLYFIMGCIDVYTAGAQIPAIFEFW-QTITA 64
Query: 73 SNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAV 132
S GT++ LGI PIVT+G++MQLL GS II++D ++ E+RAL G QKLL I++ EAV
Sbjct: 65 SRIGTLITLGIGPIVTAGIIMQLLVGSGIIQMDLSIPENRALFQGCQKLLSIIMCFVEAV 124
Query: 133 AYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICE 192
+V +G +G ++ L A L+I+Q+ F II+I LDE++ K YG+GSGI LFIA + +
Sbjct: 125 LFVGAGAFGILTPL---LAFLVIIQIAFGSIILIYLDEIVSK-YGIGSGIGLFIAAGVSQ 180
Query: 193 SIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPN---ITNLL 249
+I A P EG + + LI Q +PN I ++
Sbjct: 181 TIFVGALGP-----------EGYLWKFLNSLI---------------QGVPNIEYIAPII 214
Query: 250 ATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQ 309
T++VFL+VVY + +V +P+ +G G YPIK Y SN+P+IL +AL +N+
Sbjct: 215 GTIIVFLMVVYAECMRVEIPLAHGRIKGAVGKYPIKFVYVSNIPVILAAALFANIQLWGL 274
Query: 310 LLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFM 369
LYR + +LG ++ V G+AYY++ P L+ + ++P HA+ Y++ M
Sbjct: 275 ALYR-----MGIPILGHYEGGR------AVDGIAYYLSTPYGLSSVISDPIHAIVYMIAM 323
Query: 370 LTACALFSKTWIEVSGSSARDVAKQL 395
+ C +F W+E +G + +AK++
Sbjct: 324 IITCVMFGIFWVETTGLDPKSMAKRI 349
>sp|O42965|YGMH_SCHPO Uncharacterized protein C19G7.17 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC19G7.17 PE=4 SV=2
Length = 475
Score = 204 bits (520), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 121/393 (30%), Positives = 207/393 (52%), Gaps = 4/393 (1%)
Query: 3 GGFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGAD 62
GG R ++ ++P LPEV+ + EK+ + + ++ + S +P+YG T D
Sbjct: 2 GGARFINFIKPLSSLLPEVEGPKTHLELVEKLGWMAGCVVVYQILSIIPVYGAEKTDTLD 61
Query: 63 PFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLL 122
P RV+ S+ +M G+ PI S ++Q+LA K I V+ N+ DR L AQK++
Sbjct: 62 PINNFRVLDGSSASGLMITGLAPIYLSSFLLQILASKKKIAVNFNLIIDRVLFQNAQKVV 121
Query: 123 GILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGI 182
L+ + AV YV SG YGS S LG I++ILQ+ GI+ I L E+++KG+GLGSG
Sbjct: 122 SALLYLILAVTYVSSGYYGSFSDLGIFRFIMLILQIFLPGIVCIYLCEIIEKGHGLGSGP 181
Query: 183 SLFIATNICESIIWKAFS--PTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQ 240
L + ++I +I+W S +N ++++GA++ L + +NK +LR +R
Sbjct: 182 VLLLGSHILGNIMWDVLSLHRYPVNESGDSQYQGALVGFAFNLFSFKNKFSSLRSILFRS 241
Query: 241 NLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSAL 300
+ L + VF +Y ++ +P+RS RG + +P+KL YTS +P+I ++
Sbjct: 242 EGLSFVQFLVCIAVFATFMYTLNIRIDVPIRSSRVRGVRQNFPLKLLYTSVIPLIYFYSI 301
Query: 301 VSNLYFISQLLYRKYSGNFFVNLLGKWKESE-YSGHSIP-VGGLAYYVTAPASLADMAAN 358
+S+L + LY + LL ++ + ++ H + VGGL Y++ P L++ +
Sbjct: 302 LSHLLVFAYALYSLCPNSLITRLLVQYSPIDTFAEHKLQLVGGLVYFLYPPLGLSEALLH 361
Query: 359 PFHALFYLVFMLTACALFSKTWIEVSGSSARDV 391
P H + Y + ++ FS W+ + RDV
Sbjct: 362 PVHTVIYTITLICITIYFSLLWMNATAGGPRDV 394
>sp|P28541|SECY_METVA Protein translocase subunit SecY OS=Methanococcus vannielii GN=secY
PE=3 SV=1
Length = 438
Score = 201 bits (510), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 219/385 (56%), Gaps = 37/385 (9%)
Query: 11 VRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVI 70
++P L +PEV+ + + F+EK+ +T + L ++ + + +Y + A +W + +
Sbjct: 3 IKPILELIPEVKRPLKGVSFKEKIQWTGLVLILYFILGTIDIYMGGAEMPAMFAFW-QTV 61
Query: 71 LASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGE 130
AS GT++ LGI PIVT+G++MQLL GS++I +D + +RAL G QKL GI + E
Sbjct: 62 TASKMGTLITLGIGPIVTAGIIMQLLVGSELISLDLSKPMNRALFQGLQKLFGIFLCFLE 121
Query: 131 AVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNI 190
AV +V +G +G V+ + A++++LQL I+VI LDE++ + YG+GSGI LFIA +
Sbjct: 122 AVMFVGAGAFGVVN---STLALILVLQLALGAILVIYLDEIVSR-YGIGSGIGLFIAAGV 177
Query: 191 CESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLA 250
++I AF EG + F + VG+L AF I +L+
Sbjct: 178 AQTIFVGAFGA-----------EGYLWKFFSAM-----SVGSLGIAF-----EYILPILS 216
Query: 251 TVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQL 310
T+ VFL+VVY + +V +P+ +G G YPIK Y SN+P+IL +AL +N+ QL
Sbjct: 217 TLFVFLVVVYVESIRVEIPLAHGRVKGAVGKYPIKFIYVSNLPVILAAALFANI----QL 272
Query: 311 LYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFML 370
F++ +G +YS + V G+AYY + P ++++ ++P HA+FY + M+
Sbjct: 273 W------GMFLDRMGYPILGQYS-NGTAVSGIAYYFSTPYGISNIISDPLHAIFYTLMMV 325
Query: 371 TACALFSKTWIEVSGSSARDVAKQL 395
C LF W+E SG A+ +AK+L
Sbjct: 326 IFCILFGLFWVETSGLDAKSMAKKL 350
>sp|P38353|SSH1_YEAST Sec sixty-one protein homolog OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SSH1 PE=1 SV=1
Length = 490
Score = 196 bits (499), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/406 (31%), Positives = 211/406 (51%), Gaps = 20/406 (4%)
Query: 4 GFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGA-- 61
GFR++ +V+P LP LPEV+ K+PF +K++YT+ + I+L +Q PL G+ T
Sbjct: 3 GFRLIDIVKPILPILPEVELPFEKLPFDDKIVYTIFAGLIYLF-AQFPLVGLPKATTPNV 61
Query: 62 -DPFYWMRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQK 120
DP Y++R + T++E G+ P ++SGL++QLLAG K+I+V+ ++ DR L K
Sbjct: 62 NDPIYFLRGVFGCEPRTLLEFGLFPNISSGLILQLLAGLKVIKVNFKIQSDRELFQSLTK 121
Query: 121 LLGILIAIGEAVAYVMSGMYG---SVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYG 177
+ I+ + ++ +G +G SV Q+G LI QL AGI L E++ KG+G
Sbjct: 122 VFAIVQYVILTNIFIFAGYFGDDLSVVQIG-----LINFQLVGAGIFTTLLAEVIDKGFG 176
Query: 178 LGSGISLFIATNICESIIWKAFSPTTINSGRG--AEFEGAVIALFHLLITKQNK-VGALR 234
SG + I +++ F + I G E +GA+I L L +K +G +
Sbjct: 177 FSSGAMIINTVVIATNLVADTFGVSQIKVGEDDQTEAQGALINLIQGLRSKHKTFIGGII 236
Query: 235 EAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPI 294
AF R LPN+T + + + +IV Y Q +V LP+RS ARG YPIKL YT + +
Sbjct: 237 SAFNRDYLPNLTTTIIVLAIAIIVCYLQSVRVELPIRSTRARGTNNVYPIKLLYTGCLSV 296
Query: 295 ILQSALVSNLYFIS----QLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPA 350
+ ++ ++ + QL+ + + ++G + E+ + ++P L+ +
Sbjct: 297 LFSYTILFYIHIFAFVLIQLVAKNEPTHIICKIMGHY-ENANNLLAVPTFPLSLLAPPTS 355
Query: 351 SLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
+ P + Y F+L F+ W +SGSSARDVA + K
Sbjct: 356 FFKGVTQQPLTFITYSAFILVTGIWFADKWQAISGSSARDVALEFK 401
>sp|Q9YDD0|SECY_AERPE Protein translocase subunit SecY OS=Aeropyrum pernix (strain ATCC
700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
GN=secY PE=3 SV=2
Length = 457
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 196/380 (51%), Gaps = 30/380 (7%)
Query: 19 PEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTV 78
P V+ +RK ++ +T + L ++ + S +PLYGI R+I AS+ GT+
Sbjct: 15 PAVRKPERKPTLYRRLAWTGVILVLYFIMSNIPLYGIPPQNIGGQVDLQRIIFASSAGTL 74
Query: 79 MELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSG 138
MELGI PIVT+ L++Q+L G+KII++D E R AQK+L + A EAVA+ + G
Sbjct: 75 MELGIGPIVTASLIIQVLVGAKIIKLDLADPEGRRKFTSAQKVLALAFAALEAVAFTVGG 134
Query: 139 MY--GSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIW 196
Y G+ + G + L+ LQL ++VI DE++QKG+G+GS ISLFI + + ++W
Sbjct: 135 RYWVGTAIEPGPLDYALVSLQLFLGALLVIYFDEVMQKGWGIGSAISLFILAGVAQGVVW 194
Query: 197 KAFSPTTINSGRGAEFEGAVIALFHL-LITKQNKVGALREAFYRQNLPNITNLLATVLVF 255
F T + A+I+ L L+ + N P++T T+
Sbjct: 195 SIFG-TIPGVAQDYGLVPAIISNPDLTLLARPN------------GFPDLTGFFTTLAAI 241
Query: 256 LIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKY 315
+++VY Q +V +P+ S+ +G + P++ Y +N+PI+L LVS+L + +LL
Sbjct: 242 ILLVYLQAMRVEIPITSERFKGIRSRVPLQFIYVTNIPILLVGILVSDLLLVQRLL---- 297
Query: 316 SGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACAL 375
+ LG + Y +S + YY++ P + A+P ++ +
Sbjct: 298 -----ADYLGV-ESRAYQIYS----SIVYYLSPPRGVVQSIADPVKTAVFIASWTVLSIV 347
Query: 376 FSKTWIEVSGSSARDVAKQL 395
F W+E++G + R+ A++L
Sbjct: 348 FGYMWVEIAGLNPREQAERL 367
>sp|P49978|SECY_SULAC Protein translocase subunit SecY OS=Sulfolobus acidocaldarius
(strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 /
NCIMB 11770) GN=secY PE=3 SV=1
Length = 463
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 192/387 (49%), Gaps = 33/387 (8%)
Query: 18 LPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG-ADPFYWMRVILASNRG 76
LP V K K+++T I L ++L+ + +PLYG+ S+ F ++I AS++G
Sbjct: 14 LPAVSKPKDKPTLTRKLLWTFIGLIVYLLMASIPLYGVTSSNSFLSNFLAQQIIFASSQG 73
Query: 77 TVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVM 136
T+ +LGI P++TSGL+MQ+L GSK+I VD +E ++ A+K L ++ I E
Sbjct: 74 TLAQLGIGPVITSGLIMQILVGSKLINVDLTTQEGKSKFTQAEKALALIFIIVE------ 127
Query: 137 SGMYGSVSQLGAGN---AILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICES 193
S ++G V N I++++QL A I++ LDE++QKG+GLGSG+SLFI I +
Sbjct: 128 SSLFGYVFTRATSNILLPIIVVVQLIIASYIILLLDEMIQKGWGLGSGVSLFIMAGIMKV 187
Query: 194 IIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQN-----LPNITNL 248
I W F ++ S + + F LL++ L+E + P++ L
Sbjct: 188 IFWNMFGIVSVQS------QNLPVGFFPLLVSYITSGRNLQEIVLNTSSTTPYQPDLIGL 241
Query: 249 LATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFIS 308
+ATV + +++VY + +PV ++ RG + P+ Y S++P+I S L +++ +
Sbjct: 242 IATVGLTILIVYLVNTNIYIPVTTQRLRGIRTTVPLNFLYVSSIPVIFVSVLGADIQLFA 301
Query: 309 QLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVF 368
L N N + P G+ P S+ + +P A Y
Sbjct: 302 SL------ANSISNSASGILTDIANAFFFPPQGV------PHSVYALVVDPVGAAIYAAV 349
Query: 369 MLTACALFSKTWIEVSGSSARDVAKQL 395
+ +F WI+V+G + A+Q+
Sbjct: 350 FIVLSIVFGMLWIDVAGLDPKTQAEQM 376
>sp|O28377|SECY_ARCFU Protein translocase subunit SecY OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=secY PE=3 SV=1
Length = 493
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/433 (28%), Positives = 208/433 (48%), Gaps = 78/433 (18%)
Query: 7 VLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYW 66
V+ ++P+ +P V+ + FREK +T L ++ + S +P++G+ S D F
Sbjct: 4 VIRALQPYFERIPSVERPKGHVHFREKFGWTAAILLLYFILSNVPVFGL-SPESIDIFAA 62
Query: 67 MRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILI 126
R + A + G+++ LGI PIVT+ +++QLL G+ II++D EDRA Q+ L ++
Sbjct: 63 YRALFAGSTGSIIALGIGPIVTASIILQLLVGAGIIKLDLTNPEDRAAYQDFQRFLVFVM 122
Query: 127 AIGEAVAYVMSGMYGS----VSQLGAGNAI---LIILQLCFAGIIVICLDELLQKGYGLG 179
EA+ + G+ +QLG I LI +QL G++++ +DE++ K +G+G
Sbjct: 123 IAVEAIPQIAGGLLKPDLNLAAQLGVSPGIISFLIFIQLFIGGVLIVYMDEVVSK-WGIG 181
Query: 180 SGISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGA---LREA 236
SG+SLFI I +SI V+ LF+ +I + + A R
Sbjct: 182 SGVSLFILAGIAQSI---------------------VVGLFNWVIPPNSAMPAGIIPRWI 220
Query: 237 FYRQNLP-----------------NITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQ 279
+ QN P I L+ T + L+VV+F+G +V +P+ ARG +
Sbjct: 221 WIAQNYPLDQLFTGSGLAFLLIQGGILALITTAAIILLVVFFEGTRVEIPLAHAVARGAR 280
Query: 280 GAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPV 339
G +PIKL Y S +P+I AL +N+ + Q+L+ + V + G++ + V
Sbjct: 281 GRFPIKLIYASVLPMIFVRALQANVVALGQVLHARG-----VTIFGEFVNGK------AV 329
Query: 340 GGLAYYVTAPASLAD------------MAANP-----FHALFYLVFMLTACALFSKTWIE 382
GL +++ +S D AA P H L + ++ +F+ W+E
Sbjct: 330 SGLMFFLQPVSSPYDWIPSLVKSQGAAFAAIPDWMIYLHLLIDALILVVGGIIFAWFWVE 389
Query: 383 VSGSSARDVAKQL 395
SG AR VA Q+
Sbjct: 390 TSGMDARTVASQI 402
>sp|Q9UX84|SECY_SULSO Protein translocase subunit SecY OS=Sulfolobus solfataricus (strain
ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=secY PE=3
SV=1
Length = 469
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 197/387 (50%), Gaps = 25/387 (6%)
Query: 17 FLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRG 76
+LP V K +K++++++++ I+L+ + PLYGI S + ++I AS G
Sbjct: 13 YLPAVTKPKEKPSLGQKLVWSLVAVIIYLIMASTPLYGITSASFFKNLILEQIIFASTTG 72
Query: 77 TVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAV--AY 134
T+ +LGI PI+T+GL+MQ+LAGSK+I +D N +DR AQK L + + E+ Y
Sbjct: 73 TLAQLGIGPIITAGLIMQILAGSKLISIDLNDPDDRVKFTEAQKGLAFIFILVESALFGY 132
Query: 135 VMSGMYGSVSQLGAGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESI 194
V++ +++ A ++I QL A +++ LDEL+QKG+GLGSG+SLFI + + +
Sbjct: 133 VLARTSTTINASILFIAGIVIAQLIVATYLILLLDELIQKGWGLGSGVSLFILAGVMKIM 192
Query: 195 IWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNL--PNITNLLATV 252
W F +++S G ALF L + + + + +NL P++ L+ T+
Sbjct: 193 FWDMFGIASVSSQNLP--IGFFPALFTALASHSDVLNLIVNT-STKNLFQPDLVGLVTTI 249
Query: 253 LVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLY 312
+ +I +Y + +PV S+ RG + P+ Y S++P+I + L S++ + L
Sbjct: 250 ALIIITIYLTTMTIEIPVTSQKLRGIRRTIPLNFLYVSSIPVIFVAVLGSDIQLFASL-- 307
Query: 313 RKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYY----VTAPASLADMAANPFHALFYLVF 368
Y N+L V G+ ++ P S+ + +P AL Y V
Sbjct: 308 ASYVSPSASNILNT------------VSGVFFFPPPNSAIPHSIYAVVLDPLGALEYAVV 355
Query: 369 MLTACALFSKTWIEVSGSSARDVAKQL 395
+ LF W++V+G A+QL
Sbjct: 356 FIVLSILFGILWVDVAGLDPATQAQQL 382
>sp|Q977V3|SECY_HALVD Protein translocase subunit SecY OS=Haloferax volcanii (strain ATCC
29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 /
VKM B-1768 / DS2) GN=secY PE=3 SV=2
Length = 489
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 203/409 (49%), Gaps = 40/409 (9%)
Query: 12 RPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVIL 71
P L +P V + +PFR K+ +T L ++ + + L+G+ + T D F R IL
Sbjct: 8 EPVLSRMPAVARPEGHVPFRRKLGWTGGILVLYFFLTNVTLFGLDAATANDLFGQFRSIL 67
Query: 72 ASNRGTVMELGITPIVTSGLV--MQLLAGSKIIEVDNNVREDRALLNGAQKLL-GILIAI 128
A +G+V++LGI PIVT+ +V + A ++ DNN R D+ L G QKLL G++I +
Sbjct: 68 AGQQGSVLQLGIGPIVTASIVLQLLGGADLLGLDTDNNPR-DQVLYQGLQKLLVGVMICL 126
Query: 129 GEAVAYVMSGMYGSVSQ-----LGAGNA---ILIILQLCFAGIIVICLDELLQKGYGLGS 180
+ V +G + Q LG G LI Q+ G++++ +DE++ K +G+GS
Sbjct: 127 -TGLPMVFAGNFLPADQAVATSLGIGTVGVKGLIFAQIAVGGVLILFMDEIVSK-WGVGS 184
Query: 181 GISLFIATNICESIIWKAFSPTTINSGRG--AEFEGAVIALFHLLITKQNKVGALREAFY 238
G+ LFI + + ++ FS + G A + G + L + + L F
Sbjct: 185 GVGLFIIAGVSQQLVGGLFSWQGLGGTSGFFATWIGIITGAIELPASPTD---LLSTVFL 241
Query: 239 RQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQS 298
Q + L+ T+L+F IVVY + +V +P+ +G +G +P+KL Y S +P+IL
Sbjct: 242 GQG--QLLALITTLLIFGIVVYAESVRVEIPLSHARVKGARGRFPVKLIYASVLPMILVR 299
Query: 299 ALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLAD---- 354
AL +N+ F+ + L + G + W SG GGL YY+ S +D
Sbjct: 300 ALQANIQFLGRFLNSSWVG------MPAWLGQYTSGQV--TGGLLYYLAPIQSRSDWMWF 351
Query: 355 ---MAANPF----HALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
+A+P L L+FM+ A+F+ W+E +G + A+Q++
Sbjct: 352 LGLTSADPLDIAIRVLIDLIFMIVGGAVFAIFWVETTGMGPKSTAQQIQ 400
>sp|Q9HPB1|SECY_HALSA Protein translocase subunit SecY OS=Halobacterium salinarum (strain
ATCC 700922 / JCM 11081 / NRC-1) GN=secY PE=3 SV=1
Length = 491
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 209/412 (50%), Gaps = 47/412 (11%)
Query: 13 PFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILA 72
P L +P V+ + +PFR K+ +T L ++ + +PL+GI T G D F R +LA
Sbjct: 9 PVLTRMPAVERPEGHVPFRRKMYWTGGVLVLYFFLTNVPLWGIQ-TAGNDFFGQFRSLLA 67
Query: 73 SNRGTVMELGITPIVTSGLVMQLLAGSKIIEVD-NNVREDRALLNGAQK-LLGILIAIGE 130
+GTV++LGI PIVT+ +V+QLL G+ ++ +D +N D+A+ G QK L+G+++ +
Sbjct: 68 GGQGTVLQLGIGPIVTASIVLQLLGGANLLGLDTDNDPRDQAIYQGLQKFLVGVMVVLTG 127
Query: 131 AVAYVMSGMYGSVSQL------GA-GNAILIILQLCFAGIIVICLDELLQKGYGLGSGIS 183
A + QL GA G +LI Q+ GI+++ +DE++ K +G+GSGI
Sbjct: 128 APMVFLGNFLQPSQQLAQSMPGGAFGVEVLIFAQIAAGGILLLFMDEVISK-WGVGSGIG 186
Query: 184 LFIATNICESII-----WKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFY 238
LFI + +S++ W+ G +G + F +++ + + L
Sbjct: 187 LFIVAGVSQSLVGGLVFWEG----------GVGSQGLLPTWFDIIVGNVSNMPPLLSGSG 236
Query: 239 RQNL---PNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPII 295
+ L I LL T+ ++++VVY + +V +P+ +G +G +P+KL Y S +P+I
Sbjct: 237 IEFLLMQAGILGLLTTLFIYVVVVYAESVRVEIPLSHARVKGARGRFPVKLIYASVLPMI 296
Query: 296 LQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVT---APAS- 351
L AL +N+ F+ Q+L N + + W Y G+ GGL YY+ +P +
Sbjct: 297 LVRALQANIQFLGQIL------NSTLASMPTWL-GVYGGNGQVTGGLFYYLAPIYSPNAW 349
Query: 352 ---LADMAANPFHALFY----LVFMLTACALFSKTWIEVSGSSARDVAKQLK 396
+ A + L L FM+ A+F+ W+E + A+Q++
Sbjct: 350 MWWTSGATAARWQVLIRIAIDLSFMIIGGAIFAIFWVETADMGPDATARQIQ 401
>sp|P28542|SECY_HALMA Protein translocase subunit SecY OS=Haloarcula marismortui (strain
ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=secY
PE=3 SV=2
Length = 487
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 199/407 (48%), Gaps = 38/407 (9%)
Query: 12 RPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVIL 71
P L +P VQ + +PF+ K+ +T L ++ + + L+G+ F IL
Sbjct: 8 EPLLVRMPAVQRPEGHVPFKRKLTWTGGVLLLYFFLTNVKLFGLDIDASQQVFGRFSSIL 67
Query: 72 ASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVD-NNVREDRALLNGAQKLLGILIAIGE 130
AS +G++M+LGI PIVT+ +V+QLL G+ ++ ++ + D+ L G QKLL +++
Sbjct: 68 ASGQGSIMQLGIGPIVTASIVLQLLGGADLLGLNTQDDPRDQILYQGLQKLLVLVMICLT 127
Query: 131 AVAYVMSGMY-----GSVSQLGAGNA---ILIILQLCFAGIIVICLDELLQKGYGLGSGI 182
+ V +G + + LG G A LI Q+ G++++ +DE++ K +G+GSGI
Sbjct: 128 GLPMVFAGGFLPADTAVANSLGIGTAGVQWLIFAQMFVGGVLILFMDEVISK-WGVGSGI 186
Query: 183 SLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNL 242
LFI + + ++ + + + G +I ++L IT + G + A Q +
Sbjct: 187 GLFIVAGVSQRLVGGLLTAPFLGNSEG------IIYTWYLFITGERGTGPVLAADGLQTV 240
Query: 243 ---PNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSA 299
+ L TVL+F +VVY + +V +P+ + +G +G +P+KL Y S +P+IL A
Sbjct: 241 LLQGELLGLFTTVLIFAVVVYAESVRVEIPLSNARVKGARGRFPVKLIYASVLPMILVRA 300
Query: 300 LVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADM---- 355
L +N+ F+ ++L + LG + + P GGL Y++ S D
Sbjct: 301 LQANIQFLGRILNAQLGS--MPAFLGTYANGQ------PTGGLFYFLAPIQSRGDWMWWL 352
Query: 356 --AANPFHALFY-----LVFMLTACALFSKTWIEVSGSSARDVAKQL 395
A P + L ML A+F+ W+E + AKQ+
Sbjct: 353 EGTAQPVWQILTRVGIDLFVMLVGGAVFAVFWVETTDMGPEATAKQI 399
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.141 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 147,982,371
Number of Sequences: 539616
Number of extensions: 6001251
Number of successful extensions: 17473
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 72
Number of HSP's that attempted gapping in prelim test: 17236
Number of HSP's gapped (non-prelim): 149
length of query: 419
length of database: 191,569,459
effective HSP length: 120
effective length of query: 299
effective length of database: 126,815,539
effective search space: 37917846161
effective search space used: 37917846161
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)