Query 014749
Match_columns 419
No_of_seqs 140 out of 1252
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 17:08:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014749.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014749hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wwb_A Protein transport prote 100.0 1.3E-94 4.4E-99 751.0 24.8 402 3-405 1-404 (476)
2 2ww9_A SEC sixty-one protein h 100.0 7.8E-94 2.7E-98 746.8 22.8 400 2-406 1-411 (490)
3 3mp7_A Preprotein translocase 100.0 3.1E-88 1.1E-92 703.5 18.3 383 5-405 1-391 (482)
4 1rh5_A Preprotein translocase 100.0 2E-85 6.8E-90 675.6 34.5 359 8-405 1-359 (436)
5 3dl8_G Preprotein translocase 100.0 7.8E-76 2.7E-80 603.6 20.7 320 20-405 4-350 (429)
6 2zjs_Y Preprotein translocase 100.0 2E-75 6.9E-80 600.5 23.3 319 21-405 5-350 (434)
7 3din_C Preprotein translocase 100.0 6.2E-75 2.1E-79 596.8 19.2 313 20-405 4-345 (431)
8 3j01_A Preprotein translocase 100.0 2.7E-74 9.1E-79 592.8 22.2 318 26-405 8-349 (435)
9 1nkw_F 50S ribosomal protein L 13.1 95 0.0032 26.6 2.3 20 386-405 91-110 (146)
10 3mp7_A Preprotein translocase 10.1 2.8E+02 0.0094 28.4 5.0 26 169-197 424-449 (482)
No 1
>2wwb_A Protein transport protein SEC61 subunit alpha ISO; ribosome, protein EXIT tunnel, cotranslational protein translocation, protein conducting channel; 6.48A {Canis lupus familiaris}
Probab=100.00 E-value=1.3e-94 Score=750.97 Aligned_cols=402 Identities=65% Similarity=1.103 Sum_probs=360.6
Q ss_pred CccchHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHcccccCCCccCCCCCChhHHHHHHhhhccccccccc
Q 014749 3 GGFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELG 82 (419)
Q Consensus 3 ~~~~~~~~~~~~~~~lP~v~~p~~~~~l~~ril~Tl~il~iy~lg~~IPlpGi~~~~~~~~~~~~~~ifa~~~~Slf~LG 82 (419)
=|+|++|.+||+.+++|||++|++++|+|||++||++++++||+|++||+||+|.++..|++++++++||++|+|+|+||
T Consensus 1 m~~~~l~~~~p~~~~lP~v~~P~~~~~lr~kil~Tl~~L~iyrigs~IPlpGi~~~~~~~~~~~~~~~fa~~~~SifaLG 80 (476)
T 2wwb_A 1 MAIKFLEVIKPFCVILPEIQKPERKIQFKEKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELG 80 (476)
T ss_dssp CCSCCCCCCHHHHHHSCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHSCCCSSSTTTCSCCCHHHHHHHCSSCSSSCSSS
T ss_pred CCchHHHHHHHHHHhCCCCCCCCcCccHHHHHHHHHHHHHHHHHHccCCCCCcChhhccccHHHHHHHHccccccHHHHh
Confidence 04999999999999999999999999999999999999999999999999999998777889999999999999999999
Q ss_pred chHHHhHHHHHHHHhcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHHH
Q 014749 83 ITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAG 162 (419)
Q Consensus 83 I~PyItAsII~QLL~~~kl~~l~~~~~~gr~k~~~~tr~ltl~la~iQa~~~~~~g~~~~~~~~~~~~~~~ivl~L~aG~ 162 (419)
|+||||||||||||++.++.+.+++.+ ||+|+|++||++|+++|++||++++.+++++...+.+...+++++++|++|+
T Consensus 81 I~PyItASII~QLL~g~~iip~~~~l~-gR~k~~~~tR~lti~la~iQa~~~v~~g~~~~~~~~~~~~~~~ivl~L~~Gt 159 (476)
T 2wwb_A 81 ISPIVTSGLIMQLLAGAKIIEVGDTPK-DRALFNGAQKLFGMIITIGQSIVYVMTGMYGDPSEMGAGICLLITIQLFVAG 159 (476)
T ss_dssp STHHHHHHHHHHHHHHHCCCSCCSSSS-CSSCHHHHHHHHHHHHHHHHHHHHHHHTSSCCSSCSCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCccccchhhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCccHHHHHHHHHHHHHHH
Confidence 999999999999998767888888776 9999999999999999999999998855554333455667789999999999
Q ss_pred HHHHHHHhhhhcccCcCcchHHHHHHHHHHHHhHhhcCcccccCCCCccchhHHHHHHHHHHhhhhhhhHHHHHHhhcCC
Q 014749 163 IIVICLDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNL 242 (419)
Q Consensus 163 ~~v~wL~e~it~g~GiGnGiSLiI~~gI~~~~~~~~f~p~~~~~~~~~~~~g~i~~~~~~l~~~~~~~~~l~~~~~~~~l 242 (419)
+++|||||+||||||+|||+|++|++||+++++|+.|+|.......+.|++|+++++++.+.+++++.+.+.++++|.++
T Consensus 160 ~~lmwL~E~It~g~GiGnGiSLiI~agI~~~l~~~~f~p~~~~~~~~~e~~G~i~~~~~~~~~~~~~~~~l~~~~~r~~l 239 (476)
T 2wwb_A 160 LIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTVNTGRGMEFEGAIIALFHLLATRTDKVRALREAFYRQNL 239 (476)
T ss_dssp HHHHHHHHHHHTTTCSSCSHHHHHHHHHHHHHHHHHTCCSSCSCCCSCCTTTTCCCHHHHHHHTCTTSSSSSSCSSSSSH
T ss_pred HHHHHHHHHHhccCCcccccHHHHHHHHHHHHHHHhcCcccccccccchhHHHHHHHHHHHhcccccccchhhhhhcccc
Confidence 99999999999999999999999999999999999999987666666688898888888776666666777788888888
Q ss_pred chHHHHHHHHHHHHHhhheeceEEEEeeeeccCCCccceeeeccccccchHHHHHHHHHHHHHHHHHHHhhhcCCccccc
Q 014749 243 PNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVN 322 (419)
Q Consensus 243 p~l~~~~~~l~~~~~~V~l~~~~~~IPi~~~~~~g~~~~iPiKln~aGvmPvIfasall~~p~~i~~~l~~~~~~~~~~~ 322 (419)
|++..+++++++++++||+|++|||||+||+|++|+++|+|+|+|||||||+|||+|++++|+++++++++.++++..++
T Consensus 240 ~~~~~ll~~~~v~~~vV~~q~~~rrIPv~yak~~g~~~~~PiKln~aGviPiIfassll~~p~~i~~~~~~~~~~~~~~~ 319 (476)
T 2wwb_A 240 PNLMNLIATIFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSNLYVISQMLSARFSGNLLVS 319 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCBCCCCCBCSSSSBCSCCCBCTTTSSHHHHHHHHHHHHHHHHHHHHHHHHTSCCSCHH
T ss_pred chHHHHHHHHHHHhheeEEEEEEEEEEEEecccCCccceeeeeeccccchHHHHHHHHHHHHHHHHHHHhhcCCCcchhh
Confidence 88888888888999999999999999999999999999999999999999999999999999999998865544444344
Q ss_pred ccccccccc--cCCCccccccccccccCCccchhhccChhHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHcCc
Q 014749 323 LLGKWKESE--YSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKVYWS 400 (419)
Q Consensus 323 ~l~~~~~~~--~~~~~~~~~g~~~~l~p~~~~~~~~~~~~~~iiY~~liv~~s~~Fs~~~~~i~g~~P~diA~~Lkk~g~ 400 (419)
+++.|.+.+ .+++++|++|+.+|++||+++.+.+.+|+|.++|.++++++|++|+++|++++|+||||+||||||||+
T Consensus 320 ~lg~~~~~~~~~~~~~~~~~g~~~~l~~p~~~~~~~~~p~~~~iY~~lii~f~~fyt~~Wv~i~g~np~dvA~~Lkk~G~ 399 (476)
T 2wwb_A 320 LLGTWSDTSSGGPARAYPVGGLCHYLSPPESFGSVLEDPVHAVVYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQM 399 (476)
T ss_dssp HHCSSSTTCSCTTSSSCCSSSHHHHTSCCSSSSSCCCSSHHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHCT
T ss_pred hhhhhhhccccccccccccHHHHHHcCCcchhhhhccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHcCC
Confidence 556675321 135789999999999999988888889999999999999999999999999999999999999999999
Q ss_pred eeccc
Q 014749 401 SLLCY 405 (419)
Q Consensus 401 ~I~~~ 405 (419)
+|||+
T Consensus 400 ~IpGi 404 (476)
T 2wwb_A 400 VMRGH 404 (476)
T ss_dssp TTCCC
T ss_pred ccCCC
Confidence 99996
No 2
>2ww9_A SEC sixty-one protein homolog; ribonucleoprotein, transmembrane, phospho signal sequence, membrane, ribosome, transport; 8.60A {Saccharomyces cerevisiae} PDB: 2wwa_A
Probab=100.00 E-value=7.8e-94 Score=746.79 Aligned_cols=400 Identities=31% Similarity=0.566 Sum_probs=350.2
Q ss_pred CCccchHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHcccccCCCccCCCC---CChhHHHHHHhhhccccc
Q 014749 2 GGGFRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTG---ADPFYWMRVILASNRGTV 78 (419)
Q Consensus 2 ~~~~~~~~~~~~~~~~lP~v~~p~~~~~l~~ril~Tl~il~iy~lg~~IPlpGi~~~~~---~~~~~~~~~ifa~~~~Sl 78 (419)
|+|||++|.+||+++++|||++|+|++|+|||++||++++++||+ ++||+||+|.++. .|++..++.++|++|+|+
T Consensus 1 ~~~~~~~~~~~p~~~~lPev~~P~~~~~lr~Kil~Tl~~L~iyri-s~IPlpGi~~~~~~~~~~~~~~~~~~~a~~~~si 79 (490)
T 2ww9_A 1 MSGFRLIDIVKPILPILPEVELPFEKLPFDDKIVYTIFAGLIYLF-AQFPLVGLPKATTPNVNDPIYFLRGVFGCEPRTL 79 (490)
T ss_dssp CCCSCCCCCCCSSGGGSCCCCCCCCCCCSHHHHHHHHHHHHHTTC-CSSCCSCHHHHTTTCSSCCCTTTHHHHTCCSSST
T ss_pred CccchHHHHHHHHHHhCCcccCCCCCccHHHHHHHHHHHHHHHHH-HhcCCCCcCHHHHhcccCHHHHHHHHHcccccHH
Confidence 678999999999999999999999999999999999999999999 9999999999843 456655565569999999
Q ss_pred ccccchHHHhHHHHHHHHhcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHH
Q 014749 79 MELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQL 158 (419)
Q Consensus 79 f~LGI~PyItAsII~QLL~~~kl~~l~~~~~~gr~k~~~~tr~ltl~la~iQa~~~~~~g~~~~~~~~~~~~~~~ivl~L 158 (419)
|+|||+||||||||||||++.++.+++||+|+||||+|++|||+|+++|++||.+++.++.++ .+.+...+++++++|
T Consensus 80 faLGI~PyItASII~QLL~g~~iipl~kege~gR~k~~~~tR~lti~la~iQa~~~~~~~~~~--~~~~~~~~~~ivl~L 157 (490)
T 2ww9_A 80 LEFGLFPNISSGLILQLLAGLKVIKVNFKIQSDRELFQSLTKVFAIVQYVILTNIFIFAGYFG--DDLSVVQIGLINFQL 157 (490)
T ss_dssp TSSTTHHHHHHHHHHHHHHHHTSSCCCTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS--CCCSTTHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHhhCccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCccHHHHHHHHHHH
Confidence 999999999999999999877889999999999999999999999999999999999854333 344556678999999
Q ss_pred HHHHHHHHHHHhhhhcccCcCcchHHHHHHHHHHHHhHhhcCcccccCCCCc--cchhHHHHHHHHH-HhhhhhhhHHHH
Q 014749 159 CFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINSGRGA--EFEGAVIALFHLL-ITKQNKVGALRE 235 (419)
Q Consensus 159 ~aG~~~v~wL~e~it~g~GiGnGiSLiI~~gI~~~~~~~~f~p~~~~~~~~~--~~~g~i~~~~~~l-~~~~~~~~~l~~ 235 (419)
++|++++|||||+||||||+|||+||+|++||+++++|++++|.....+.+. |++|+++++++.+ .+.+++.+.+..
T Consensus 158 ~~Gt~~lmwLgE~It~G~GIGnGiSLiI~agI~~~lp~~~~s~~~~~~~~~~~~e~~G~~~~~~~~~~~~~~~~~~~l~~ 237 (490)
T 2ww9_A 158 VGAGIFTTLLAEVIDKGFGFSSGAMIINTVVIATNLVADTFGVSQIKVGEDDQTEAQGALINLIQGLRSKHKTFIGGIIS 237 (490)
T ss_dssp HHHHHHHHHHHHHHHTTSSSSCHHHHHHHHHHHHHHHHHHTCCCCCCCCSSCCCSCCCHHHHHHHHHHCCCSSCCCSCCC
T ss_pred HHHHHHHHHHHHHHhcccCcccccHHHHHHHHHHHHHHHHhccccccccccccccccchHHHHHHHHhhcccccccchhh
Confidence 9999999999999999999999999999999999999999998765554433 7899998887765 233333333446
Q ss_pred HHhhcCCchHHHHHHHHHHHHHhhheeceEEEEeeeeccCCCccceeeeccccccchHHHHHHHHHHHHHHHHH----HH
Q 014749 236 AFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQ----LL 311 (419)
Q Consensus 236 ~~~~~~lp~l~~~~~~l~~~~~~V~l~~~~~~IPi~~~~~~g~~~~iPiKln~aGvmPvIfasall~~p~~i~~----~l 311 (419)
+++|.++|+++.+++++++++++||+|++|||||+||+|++|+++|+|+|+|||||||+|||+|++++|+++++ ++
T Consensus 238 ~~~r~~lp~l~~l~~~l~vi~~vV~~q~~~rrIPIqyak~~g~~s~lPlKln~aGviPiIFassll~~p~~i~~~~~~~~ 317 (490)
T 2ww9_A 238 AFNRDYLPNLTTTIIVLAIAIIVCYLQSVRVELPIRSTRARGTNNVYPIKLLYTGCLSVLFSYTILFYIHIFAFVLIQLV 317 (490)
T ss_dssp CCSSSSCCSHHHHHHHHHHHHHHHHHTTCCEECCCBCSSSSSBCCCCEECHHHHTHHHHHHHHHHHHHCSSSCSTTTHHH
T ss_pred HHhhccccHHHHHHHHHHHHHHHheeeeeEEEEEEEEcccCCcCceeeeEeccccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 67889999988889999999999999999999999999999999999999999999999999999999999888 66
Q ss_pred hhhcCCcccccccccccccccCCCccccccccccccCCccchhhccC-hhHHHHHHHHHHHHHHHHHHHHHHhhCCCHHH
Q 014749 312 YRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAAN-PFHALFYLVFMLTACALFSKTWIEVSGSSARD 390 (419)
Q Consensus 312 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~l~p~~~~~~~~~~-~~~~iiY~~liv~~s~~Fs~~~~~i~g~~P~d 390 (419)
++.++++..+++++.|.+. .++++|++++.+|++||+++.+.+.+ |+|.++|.++.+++|++|||||++++|+||||
T Consensus 318 ~~~~~~~~~~~~lg~~~~~--~~~~~~~~~~~~~l~~p~~~~~~~~~~p~~~~iY~~~~~~lii~Fs~fy~~i~g~np~d 395 (490)
T 2ww9_A 318 AKNEPTHIICKIMGHYENA--NNLLAVPTFPLSLLAPPTSFFKGVTQQPLTFITYSAFILVTGIWFADKWQAISGSSARD 395 (490)
T ss_dssp HHCCCCSSSCTTSBCCSCC--SSSSCSCSSBSCCSSCCCCSSCCCCSCSHHHHHHHHHHHHHHHHHHHHHHHSCSSCHHH
T ss_pred cccCCCccccccccchhcc--ccccchhHHHHHHhCCccchhhhcccCchhhHHHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 5433333222345567422 36788999999999999998888888 99999999999999999999999999999999
Q ss_pred HHHHHHHcCceecccc
Q 014749 391 VAKQLKVYWSSLLCYF 406 (419)
Q Consensus 391 iA~~Lkk~g~~I~~~~ 406 (419)
+||||||||++|||+=
T Consensus 396 vA~nLkk~G~~IpGiR 411 (490)
T 2ww9_A 396 VALEFKDQGITLMGRR 411 (490)
T ss_dssp HHHHHHHHHHTSSSCC
T ss_pred HHHHHHHcCCccCCCC
Confidence 9999999999999963
No 3
>3mp7_A Preprotein translocase subunit SECY; protein transport, membrane protein complex, preprotein TRAN membrane insertion,; 2.90A {Pyrococcus furiosus} SCOP: f.41.1.0
Probab=100.00 E-value=3.1e-88 Score=703.51 Aligned_cols=383 Identities=34% Similarity=0.668 Sum_probs=264.3
Q ss_pred cchHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHcccccCCCccCCCCCChhHHHHHHhhhcccccccccch
Q 014749 5 FRVLHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGIT 84 (419)
Q Consensus 5 ~~~~~~~~~~~~~lP~v~~p~~~~~l~~ril~Tl~il~iy~lg~~IPlpGi~~~~~~~~~~~~~~ifa~~~~Slf~LGI~ 84 (419)
|+++|.+||+++++|||++|+|++|+|||++||++++++||+|++||+||+|.+. .|++..++.+++.+|+|+|+|||+
T Consensus 1 ~~~~~~~~p~~~~lP~v~~P~~~~~lr~Kil~Tl~~L~iyrlgs~IPlpGi~~~~-~~~~~~l~~~~Gg~~~SifaLGI~ 79 (482)
T 3mp7_A 1 MGARDIIYALERWFPEVERPKRRVPLRERFMWTGVALILYYVLAEIPVYGIPERI-QDYFQFLRVVLAGRNGSILTLGIG 79 (482)
T ss_dssp -------------------------CTTTHHHHHHHHHHHHHHHHSBCTTCCSSC-CCSCSSTTTTTCSCTTBTTSSTTH
T ss_pred CCHHHHHHHHHhhCCCccCccccccHHHHHHHHHHHHHHHHHHhhCCCCCcCccc-ccHHHHHHHhcCCCcccHHHHhhH
Confidence 4689999999999999999999999999999999999999999999999999864 344444444557789999999999
Q ss_pred HHHhHHHHHHHHhcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-ccchhHHHHHHHHHHHHHH
Q 014749 85 PIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVS-QLGAGNAILIILQLCFAGI 163 (419)
Q Consensus 85 PyItAsII~QLL~~~kl~~l~~~~~~gr~k~~~~tr~ltl~la~iQa~~~~~~g~~~~~~-~~~~~~~~~ivl~L~aG~~ 163 (419)
||||||||||||+..|++++|||+|+||||+|++|||+|+++|++||.+++.++.++... ..+...+++++++|++|++
T Consensus 80 PyITASII~QLL~~~~l~~l~kege~gR~k~~~~tR~lti~la~iQa~~~v~~~~~~~~~~~~~~~~~~~ivl~L~aGt~ 159 (482)
T 3mp7_A 80 PIVTAGIILQLLVGSEIIKLDLANPEDRRFYQALQRVFSVFMCFFEAAVWILGGAFGRVGVDVTYAIAVLMILQLAMGGI 159 (482)
T ss_dssp HHHHHHHHTTC-----------------------CHHHHHHHHHHHHHHHHHSSSSSCC------CTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccchHHHHHHHHHHHHHHH
Confidence 999999999999998999999999999999999999999999999999999864333211 1234567899999999999
Q ss_pred HHHHHHhhhhcccCcCcchHHHHHHHHHHHHhHhhcCcccccCC-----CCccchhHHHHHHHHHHhhhhhhhHHHHHHh
Q 014749 164 IVICLDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINSG-----RGAEFEGAVIALFHLLITKQNKVGALREAFY 238 (419)
Q Consensus 164 ~v~wL~e~it~g~GiGnGiSLiI~~gI~~~~~~~~f~p~~~~~~-----~~~~~~g~i~~~~~~l~~~~~~~~~l~~~~~ 238 (419)
++|||||+||| ||+|||+|++|++||+++++|+++++.+...+ .+.|++|++++++|.+.+ +.+.++++
T Consensus 160 ~lmwL~E~It~-~GiGnGiSLiI~agI~~~lp~~~~~~~~~~~~~~~~~~~~e~~g~~~~~~~~~~~-----~~l~~~~~ 233 (482)
T 3mp7_A 160 VLIILDELVSK-WGIGSGISLFIAAGVSQTILTRSLNPLTDPNIIDPLTGQPAIVGAIPYFIQHILK-----GDLWGAIY 233 (482)
T ss_dssp HHHHHHHHHHH-HSSSCHHHHHHHHHHHHHHHHHHSCCCCCCC---CCSSSCCCSCHHHHHHHHHHH-----CCSCSSCC
T ss_pred HHHHHHHHHhh-cCcccccHHHHHHHHHHHHHHHHHhhhhcccccccccccccccchHHHHHHHHhc-----chhhHHHh
Confidence 99999999999 99999999999999999999999987433221 245778988887776542 23334566
Q ss_pred hcCCc--hHHHHHHHHHHHHHhhheeceEEEEeeeeccCCCccceeeeccccccchHHHHHHHHHHHHHHHHHHHhhhcC
Q 014749 239 RQNLP--NITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYS 316 (419)
Q Consensus 239 ~~~lp--~l~~~~~~l~~~~~~V~l~~~~~~IPi~~~~~~g~~~~iPiKln~aGvmPvIfasall~~p~~i~~~l~~~~~ 316 (419)
| ++| +++.+++++++++++||+|++|||||+||+|++ +++|+|+|+|||||||+|||+|++++|+++++++++.
T Consensus 234 ~-~lp~~~l~~l~~~l~v~~~vV~~q~~~rrIPvqyak~~-~~~~iPiKln~aGviPiIfassll~~p~~i~~~~~~~-- 309 (482)
T 3mp7_A 234 R-GGSAPDMLSVVATIVVFFIVVYFESMRVEIPLGYRGVT-VRGSYPIRFLYVSNIPIILTFALYANIQLWARVLDRL-- 309 (482)
T ss_dssp C-SSSSCCHHHHHHHHHHHHHHHHHHHCCEEC-------------CEECSSSSTTHHHHHHHHHHHHHHHHHHHHHTT--
T ss_pred h-ccchhHHHHHHHHHHHHHHhheeEeeEEEEEEEecccc-ccceeeEeecccCchHHHHHHHHHHHHHHHHHHhhhc--
Confidence 7 778 788888999999999999999999999999976 8899999999999999999999999999999987542
Q ss_pred CcccccccccccccccCCCccccccccccccCCccchhhccChhHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHH
Q 014749 317 GNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLK 396 (419)
Q Consensus 317 ~~~~~~~l~~~~~~~~~~~~~~~~g~~~~l~p~~~~~~~~~~~~~~iiY~~liv~~s~~Fs~~~~~i~g~~P~diA~~Lk 396 (419)
..+++++|+.. ..+|++++++|++||.++.+.+.+|.+.++|.++.+++|++|||||++++++||||+|||||
T Consensus 310 ---~~~~l~~~~~~----~~~~~~g~~~~l~p~~s~~~~~~~p~~~~~Y~~~~~~lii~Fs~fy~~is~~np~diA~nlk 382 (482)
T 3mp7_A 310 ---GHPWLGRFDPT----TGSPISGFVLYVIPPRNIFSVIDNPVRAIVYLILTVIFSLLFGYLWVELTGLDARSIARQLQ 382 (482)
T ss_dssp ---SCCSSBCCCCT----TSCCCCBSGGGSCCCSSSTHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHSSTTGGGCCC---
T ss_pred ---cchhhhhhccc----ccccchhHHHHhCCcccHHHHhcCcchhHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 12346666432 13589999999999988877778899999999999999999999999997799999999999
Q ss_pred HcCceeccc
Q 014749 397 VYWSSLLCY 405 (419)
Q Consensus 397 k~g~~I~~~ 405 (419)
|||++|||+
T Consensus 383 k~G~~IpGi 391 (482)
T 3mp7_A 383 RAGLQIPGF 391 (482)
T ss_dssp -----CCTT
T ss_pred HcCCccCCc
Confidence 999999996
No 4
>1rh5_A Preprotein translocase SECY subunit; protein translocation, SECY, membrane protein, protein channels, protein transport; 3.20A {Methanocaldococcus jannaschii} SCOP: f.41.1.1 PDB: 1rhz_A 2yxq_A 3dkn_A 2yxr_A 3bo0_A 3bo1_A 3kcr_A
Probab=100.00 E-value=2e-85 Score=675.57 Aligned_cols=359 Identities=37% Similarity=0.689 Sum_probs=302.0
Q ss_pred HHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHcccccCCCccCCCCCChhHHHHHHhhhcccccccccchHHH
Q 014749 8 LHLVRPFLPFLPEVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIV 87 (419)
Q Consensus 8 ~~~~~~~~~~lP~v~~p~~~~~l~~ril~Tl~il~iy~lg~~IPlpGi~~~~~~~~~~~~~~ifa~~~~Slf~LGI~PyI 87 (419)
+|.+||+++++|||++|+|++|+|||++||++++++||+|++||+||+|.++. |.+..++.++|++|+|+|+|||+|||
T Consensus 1 ~~~~~p~~~~lP~v~~p~~~~~lr~kil~Tl~~L~iyr~gs~IPlpGi~~~~~-~~~~~~~~~~a~~~~sifaLGI~PyI 79 (436)
T 1rh5_A 1 MKKLIPILEKIPEVELPVKEITFKEKLKWTGIVLVLYFIMGCIDVYTAGAQIP-AIFEFWQTITASRIGTLITLGIGPIV 79 (436)
T ss_dssp -CTTHHHHHHSCCCCCCSSCCCHHHHHHHHHHHHHHHHHHTTSBCCCSSCCCC-SCCTTHHHHHTCCTTBTTTTTTHHHH
T ss_pred CchhhHHHHhCCCCCCCCcCccHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHH-HHHHHHHHhhccccchHHHHccHHHH
Confidence 58899999999999999999999999999999999999999999999999665 44434444448999999999999999
Q ss_pred hHHHHHHHHhcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHHHHHHHH
Q 014749 88 TSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYGSVSQLGAGNAILIILQLCFAGIIVIC 167 (419)
Q Consensus 88 tAsII~QLL~~~kl~~l~~~~~~gr~k~~~~tr~ltl~la~iQa~~~~~~g~~~~~~~~~~~~~~~ivl~L~aG~~~v~w 167 (419)
|||||||||++.++.++|||+|+||||+|++|||+|+++|++||.+++.+|.+. +.+..++++++++|++|++++||
T Consensus 80 tAsII~QLL~g~~~i~l~kege~gr~ki~~~tR~lti~la~iQa~~~~~~g~~~---~~~~~~~~~~vl~L~~Gt~~lmw 156 (436)
T 1rh5_A 80 TAGIIMQLLVGSGIIQMDLSIPENRALFQGCQKLLSIIMCFVEAVLFVGAGAFG---ILTPLLAFLVIIQIAFGSIILIY 156 (436)
T ss_dssp HHHHHHHHHHHHTTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSC---CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCceeeecccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---CCchHHHHHHHHHHHHHHHHHHH
Confidence 999999999876788999999999999999999999999999999999854332 24556678999999999999999
Q ss_pred HHhhhhcccCcCcchHHHHHHHHHHHHhHhhcCcccccCCCCccchhHHHHHHHHHHhhhhhhhHHHHHHhhcCCchHHH
Q 014749 168 LDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITN 247 (419)
Q Consensus 168 L~e~it~g~GiGnGiSLiI~~gI~~~~~~~~f~p~~~~~~~~~~~~g~i~~~~~~l~~~~~~~~~l~~~~~~~~lp~l~~ 247 (419)
|||+||| ||+|||+|++|++||+++++|+.++|. |+++++++.+.+++. +..++..
T Consensus 157 L~E~It~-~GiGnGiSLiI~~gI~~~lp~~~~~~~-----------G~i~~~~~~~~~~~~------------~~~~l~~ 212 (436)
T 1rh5_A 157 LDEIVSK-YGIGSGIGLFIAAGVSQTIFVGALGPE-----------GYLWKFLNSLIQGVP------------NIEYIAP 212 (436)
T ss_dssp HHHHHHH-HSSSCHHHHHHHHHHHHHHHHHHHSTT-----------CHHHHHHHHTTTTCC------------CGGGTHH
T ss_pred HHHHHHh-cCcccccHHHHHHHHHHHHHHHHhccc-----------chHHHHHHHHhcccc------------hHHHHHH
Confidence 9999999 999999999999999999999888763 788887764433211 1112556
Q ss_pred HHHHHHHHHHhhheeceEEEEeeeeccCCCccceeeeccccccchHHHHHHHHHHHHHHHHHHHhhhcCCcccccccccc
Q 014749 248 LLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKW 327 (419)
Q Consensus 248 ~~~~l~~~~~~V~l~~~~~~IPi~~~~~~g~~~~iPiKln~aGvmPvIfasall~~p~~i~~~l~~~~~~~~~~~~l~~~ 327 (419)
+++++++++++||+|++|||||+||+|++|+++|+|+|+|||||||+|||+|++++|+++++++++. ++ ++++.|
T Consensus 213 l~~~l~v~~~vV~~~~~~rrIPvqyak~~g~~~~lPlKln~aGviPiIfassll~~p~~i~~~~~~~--~~---~~~g~~ 287 (436)
T 1rh5_A 213 IIGTIIVFLMVVYAECMRVEIPLAHGRIKGAVGKYPIKFVYVSNIPVILAAALFANIQLWGLALYRM--GI---PILGHY 287 (436)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCCSSSTTCCCEEEEESCTTCSHHHHHHHHHHHHHHHHHHHHHTT--SC---CTTCCB
T ss_pred HHHHHHHHHHHHhhcceEEEEEEEecccCCccceeeeecccccchHHHHHHHHHHHHHHHHHHhccc--Cc---chhhhc
Confidence 6677888889999999999999999999899999999999999999999999999999999987532 11 235556
Q ss_pred cccccCCCccccccccccccCCccchhhccChhHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHcCceeccc
Q 014749 328 KESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKVYWSSLLCY 405 (419)
Q Consensus 328 ~~~~~~~~~~~~~g~~~~l~p~~~~~~~~~~~~~~iiY~~liv~~s~~Fs~~~~~i~g~~P~diA~~Lkk~g~~I~~~ 405 (419)
+ +.+|++|+++|++||+++.+...+|.+..+|.++.+++|++|||||++++++||||+||||||||++|||.
T Consensus 288 ~------~~~~~~gl~yyl~pp~~~~~~~~~p~~~~~y~~~~~~lii~Fs~fy~~is~~np~diA~~Lkk~G~~IpGi 359 (436)
T 1rh5_A 288 E------GGRAVDGIAYYLSTPYGLSSVISDPIHAIVYMIAMIITCVMFGIFWVETTGLDPKSMAKRIGSLGMAIKGF 359 (436)
T ss_dssp C------SSSBSSSTTGGGCCCCSSSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTCSHHHHHHHC----------
T ss_pred c------cccccccchhhcCChhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHCCCcCCCc
Confidence 3 24899999999999887666566788888999999999999999999997799999999999999999996
No 5
>3dl8_G Preprotein translocase subunit SECY; RECA-type ATPase membrane protein translocation protein- protein complex, ATP-binding, cell membrane; 7.50A {Aquifex aeolicus}
Probab=100.00 E-value=7.8e-76 Score=603.64 Aligned_cols=320 Identities=19% Similarity=0.287 Sum_probs=262.4
Q ss_pred cccccccccchHHHHHHHHHHHHHHHHcccccCCCccCCCCCC-------hhHHHHHHh---hhcccccccccchHHHhH
Q 014749 20 EVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGAD-------PFYWMRVIL---ASNRGTVMELGITPIVTS 89 (419)
Q Consensus 20 ~v~~p~~~~~l~~ril~Tl~il~iy~lg~~IPlpGi~~~~~~~-------~~~~~~~if---a~~~~Slf~LGI~PyItA 89 (419)
+.++.+|++|+|||++||++++++||+|++||+||+|.++.++ ..+++.+++ |++|+|+|+|||+|||||
T Consensus 4 ~~~~~~~~~~lr~kilfTl~~L~iyrlg~~IPlpGi~~~~~~~~~~~~~~~~~~~l~~~~GGa~~~~sifaLGI~PyItA 83 (429)
T 3dl8_G 4 YLKALFELKELRQKFIFTLLMFVIYRLGSHIPIPGINPEALRDFLKAFEGSVFALYDIFSGGNLGRLTVFALGVMPYISA 83 (429)
T ss_dssp ----CCSCCCCHHHHHHHHHHHHHHHHHHHCSSCCCC---------------CCSSSSSSCCSSSCCCSSSSSHHHHHHH
T ss_pred HHHHHHcchhHHHHHHHHHHHHHHHHHHccCCCCCCCHHHHHHHhhhccccHHHHHHHHhCcccccccHHHHhhHHHHHH
Confidence 5677899999999999999999999999999999999987642 233444555 379999999999999999
Q ss_pred HHHHHHHhcc--ccccccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------ccccccchhHHHHHHHHHH
Q 014749 90 GLVMQLLAGS--KIIEVDN-NVREDRALLNGAQKLLGILIAIGEAVAYVMSGMY-------GSVSQLGAGNAILIILQLC 159 (419)
Q Consensus 90 sII~QLL~~~--kl~~l~~-~~~~gr~k~~~~tr~ltl~la~iQa~~~~~~g~~-------~~~~~~~~~~~~~ivl~L~ 159 (419)
|||||||+.. ++++++| |+|+||||+|++|||+|+++|++||.+++.++.+ +...+.+...+++++++||
T Consensus 84 sII~QLL~~~~P~l~~l~k~ege~gr~ki~~~tR~lti~la~iQa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~L~ 163 (429)
T 3dl8_G 84 SIMMQLLTVAIPSLQRLAKEEGDYGRYKINEYTKYLTLFVATVQSLGIAFWIRGQVSPKGIPVVENPGISFILITVLTLV 163 (429)
T ss_dssp HHHHHHHHHHSSCSSSCSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCCCCSSSTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhHHHhhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCcHHHHHHHHHHHH
Confidence 9999999987 9999999 9999999999999999999999999999875322 1222345567889999999
Q ss_pred HHHHHHHHHHhhhhcccCcCcchHHHHHHHHHHHHhHhhcCcccccCCCCccchhHHHHHHHHHHhhhhhhhHHHHHHhh
Q 014749 160 FAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYR 239 (419)
Q Consensus 160 aG~~~v~wL~e~it~g~GiGnGiSLiI~~gI~~~~~~~~f~p~~~~~~~~~~~~g~i~~~~~~l~~~~~~~~~l~~~~~~ 239 (419)
+||+++|||||+||| ||+|||+|++|++||+++++++.+++...... + + .+.+
T Consensus 164 aGt~~lmwL~E~It~-~GiGnGiSliI~~gI~~~lp~~~~~~~~~~~~-g-~-~~~~----------------------- 216 (429)
T 3dl8_G 164 AGTMFLVWIADRITE-KGIGNGASLIIFAGIVANFPNAVIQFYEKVKT-G-D-IGPL----------------------- 216 (429)
T ss_dssp HHHHHHHHHHHHHHH-HTCTTHHHHHHHHHHHHHTTTTSSCCCCSSSC-S-S-SCTH-----------------------
T ss_pred HHHHHHHHHHHHHhh-cCcCcchHHHHHHHHHHHHHHHHHhHHHHhcC-C-c-chHH-----------------------
Confidence 999999999999999 99999999999999999998888776322110 1 1 1211
Q ss_pred cCCchHHHHHHHHHHHHHhhheeceEEEEeeeecc-C------CCccceeeeccccccchHHHHHHHHHHHHHHHHHHHh
Q 014749 240 QNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKN-A------RGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLY 312 (419)
Q Consensus 240 ~~lp~l~~~~~~l~~~~~~V~l~~~~~~IPi~~~~-~------~g~~~~iPiKln~aGvmPvIfasall~~p~~i~~~l~ 312 (419)
+++..+++++++++++||+|++|||||+||+| + +|+++|+|+|+|||||||+|||+|++++|++++++++
T Consensus 217 ---~~l~~l~~~l~vi~~vV~~~~~~rrIPvqyakr~~g~~~~~g~~~~iPlKln~aGvmPiIfassll~~p~~i~~~~~ 293 (429)
T 3dl8_G 217 ---TLLLIIALIIAIIVGIVYVQEAERRIPIQYPGRQVGRQLYAGRKTYLPIKINPAGVIPIIFAQALLLIPSTLLNFVQ 293 (429)
T ss_dssp ---HHHHHHHHHHHHHHHHTCSCCCCCCCCCBCSSSCBCCCCCCCCCCCCCCCCCCCCSSHHHHHHHHHHHHHHHHHSCS
T ss_pred ---HHHHHHHHHHHHHHHHHHheeeEEEEEEEEchhhccccccCCCCceeeeeeccccchHHHHHHHHHHHHHHHHHHcc
Confidence 13566778888889999999999999999997 3 5789999999999999999999999999999988652
Q ss_pred hhcCCcccccccccccccccCCCccccccccccccCCccchhhccChhHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHH
Q 014749 313 RKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVA 392 (419)
Q Consensus 313 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~l~p~~~~~~~~~~~~~~iiY~~liv~~s~~Fs~~~~~i~g~~P~diA 392 (419)
+ .|. +++.+|++|+ +|+|.++|.++++ +|||||++++ +||||+|
T Consensus 294 ~------------~~~-----------~~~~~~l~~~--------~~~y~~~y~~lii----~Fs~fy~~i~-~np~diA 337 (429)
T 3dl8_G 294 N------------PFI-----------KVIADMFQPG--------AIFYNFLYVTFIV----FFTYFYTAVL-INPVELA 337 (429)
T ss_dssp S------------CCC-----------CTTTTTTTTT--------HHHHHHHHHHHHH----HHHHHHHTCT-THHHHHH
T ss_pred h------------HHH-----------HHHHHHcCCC--------chHHHHHHHHHHH----HHHHHHHHHc-cCHHHHH
Confidence 1 132 2345778764 4888888888777 9999999999 9999999
Q ss_pred HHHHHcCceeccc
Q 014749 393 KQLKVYWSSLLCY 405 (419)
Q Consensus 393 ~~Lkk~g~~I~~~ 405 (419)
|||||||++|||.
T Consensus 338 ~~lkk~G~~IpGi 350 (429)
T 3dl8_G 338 ENLHKAGAFIPGV 350 (429)
T ss_dssp HTCCCCBSSSBCC
T ss_pred HHHHHCCCcCCCC
Confidence 9999999999996
No 6
>2zjs_Y Preprotein translocase SECY subunit; translocon, SEC, protein-conducting-channel, membrane, prote transport, translocation, transmembrane, transport; 3.20A {Thermus thermophilus} PDB: 2zqp_Y
Probab=100.00 E-value=2e-75 Score=600.49 Aligned_cols=319 Identities=20% Similarity=0.307 Sum_probs=263.4
Q ss_pred ccccccccchHHHHHHHHHHHHHHHHcccccCCCccCCCCCC-------hhHHHHHHh---hhcccccccccchHHHhHH
Q 014749 21 VQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGAD-------PFYWMRVIL---ASNRGTVMELGITPIVTSG 90 (419)
Q Consensus 21 v~~p~~~~~l~~ril~Tl~il~iy~lg~~IPlpGi~~~~~~~-------~~~~~~~if---a~~~~Slf~LGI~PyItAs 90 (419)
.++.+|++|+|||++||++++++||+|++||+||+|.++.+| +++++.++| |++|+|+|+|||+||||||
T Consensus 5 ~~~~~~~~~lr~kilfTl~~L~iyrlg~~IPlPGi~~~~~~~~~~~~~~~~~~~~~~fsGGa~~~~SifaLGI~PyItAS 84 (434)
T 2zjs_Y 5 FWSALQIPELRQRVLFTLLVLAAYRLGAFIPTPGVDLDKIQEFLRTAQGGVFGIINLFSGGNFERFSIFALGIMPYITAA 84 (434)
T ss_dssp HHHHHSSHHHHHHHHHHHHHHHHHHHHTTCBCTTBCHHHHHHHHHSSGGGTTHHHHHHTTSCGGGTBTTSSTTHHHHHHH
T ss_pred HHhHhcchhHHHHHHHHHHHHHHHHHhcccccCCcCHHHHHHHHhcccccHHHHHHHHcccccccCcHHHHhhHHHHHHH
Confidence 345788999999999999999999999999999999876543 566777777 5789999999999999999
Q ss_pred HHHHHHhcc--cccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----c--cccc--cchhHHHHHHHHHHH
Q 014749 91 LVMQLLAGS--KIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMY----G--SVSQ--LGAGNAILIILQLCF 160 (419)
Q Consensus 91 II~QLL~~~--kl~~l~~~~~~gr~k~~~~tr~ltl~la~iQa~~~~~~g~~----~--~~~~--~~~~~~~~ivl~L~a 160 (419)
||||||+.. ++++++||+|+||||+|++|||+|+++|++||++++.+ +. + ...+ .+..++++++++|++
T Consensus 85 II~QLL~~vip~l~~l~keGe~Gr~ki~~~tR~lti~la~iQa~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~vl~L~a 163 (434)
T 2zjs_Y 85 IIMQILVTVVPALEKLSKEGEEGRRIINQYTRIGGIALGAFQGFFLATA-FLGAEGGRFLLPGWSPGPFFWFVVVVTQVA 163 (434)
T ss_dssp HHHHHHHHHSHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTSSSSSTTBCTTCCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcchhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhcccCccccccCCccHHHHHHHHHHHHH
Confidence 999999754 56679999999999999999999999999999999985 32 3 1123 455567899999999
Q ss_pred HHHHHHHHHhhhhcccCcCcchHHHHHHHHHHHHhHhhcCcccccCCCCccchhHHHHHHHHHHhhhhhhhHHHHHHhhc
Q 014749 161 AGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQ 240 (419)
Q Consensus 161 G~~~v~wL~e~it~g~GiGnGiSLiI~~gI~~~~~~~~f~p~~~~~~~~~~~~g~i~~~~~~l~~~~~~~~~l~~~~~~~ 240 (419)
||+++|||||+||| ||+|||+|++|++||++++++.+.+....... + + .+ .+.
T Consensus 164 Gt~~lmwLgE~It~-~GIGnGiSliI~~gIv~~lp~~~~~~~~~~~~-~-~-~~-----------------~~~------ 216 (434)
T 2zjs_Y 164 GIALLLWMAERITE-YGIGNGTSLIIFAGIVVEWLPQILRTIGLIRT-G-E-VN-----------------LVA------ 216 (434)
T ss_dssp HHHHHHHHHHHHHH-TSSSCHHHHHHHHHHHHTHHHHHHHHHHTTTT-T-S-SC-----------------HHH------
T ss_pred HHHHHHHHHHHHhh-cCcccccHHHHHHHHHHHHHHHHHHHHHHhcc-C-c-cc-----------------HHH------
Confidence 99999999999999 99999999999999999996544322110000 0 0 01 000
Q ss_pred CCchHHHHHHHHHHHHHhhheeceEEEEeeeeccC---C----CccceeeeccccccchHHHHHHHHHHHHHHHHHHHhh
Q 014749 241 NLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNA---R----GQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYR 313 (419)
Q Consensus 241 ~lp~l~~~~~~l~~~~~~V~l~~~~~~IPi~~~~~---~----g~~~~iPiKln~aGvmPvIfasall~~p~~i~~~l~~ 313 (419)
.++.+++++++++++||+|++|||||+||+|. | |+++|+|+|+|+|||||+|||+|++++|++++++++
T Consensus 217 ---~~~~l~~~~~vi~~vV~~~~~~rrIPvqyakr~~gr~~~~g~~s~lPlKln~aGviPiIfassll~~p~~i~~~~~- 292 (434)
T 2zjs_Y 217 ---FLFFLAFIVLAFAGMAAVQQAERRIPVQYARKVVGGRVYGGQATYIPIKLNAAGVIPIIFAAAILQIPIFLAAPFQ- 292 (434)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHCEEEEEEEECC-------CCCCEEEEEEESSSCTHHHHHHHHHHHHHHHHHHTTCT-
T ss_pred ---HHHHHHHHHHHHHHHHHheeeEEEEeehhhhhhccCcccCCcceEEeeehhcccchHHHHHHHHHHHHHHHHHHhc-
Confidence 13455677788889999999999999999983 3 789999999999999999999999999999998653
Q ss_pred hcCCcccccccccccccccCCCccccccccccccCCccchhhccChhHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHH
Q 014749 314 KYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAK 393 (419)
Q Consensus 314 ~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~l~p~~~~~~~~~~~~~~iiY~~liv~~s~~Fs~~~~~i~g~~P~diA~ 393 (419)
++ .|. +++.+|++|+ +|+|.++|.++++ +|||||++++ +||||+||
T Consensus 293 ---~~-------~~~-----------~~~~~~l~~~--------~~~y~~~y~~lii----~Fs~fyt~i~-~np~diA~ 338 (434)
T 2zjs_Y 293 ---DN-------PVL-----------QGIANFFNPT--------RPSGLFIEVLLVI----LFTYVYTAVQ-FDPKRIAE 338 (434)
T ss_dssp ---TC-------HHH-----------HHHHHHHCSS--------SHHHHHHHHHHHH----HHHHHHHHCS-SCHHHHHH
T ss_pred ---cc-------hHH-----------HHHHHHcCCC--------ChHHHHHHHHHHH----HHHHHHHHHc-cCHHHHHH
Confidence 11 132 1345778775 5999999999999 8999999999 99999999
Q ss_pred HHHHcCceeccc
Q 014749 394 QLKVYWSSLLCY 405 (419)
Q Consensus 394 ~Lkk~g~~I~~~ 405 (419)
||||||++|||.
T Consensus 339 nLkk~G~~IpGi 350 (434)
T 2zjs_Y 339 SLREYGGFIPGI 350 (434)
T ss_dssp HTTTTTEECTTB
T ss_pred HHHHCCCccCCC
Confidence 999999999996
No 7
>3din_C Preprotein translocase subunit SECY; protein translocation, membrane protein, ATPase, ATP-binding membrane, nucleotide-binding, protein transport; HET: ADP; 4.50A {Thermotoga maritima MSB8}
Probab=100.00 E-value=6.2e-75 Score=596.83 Aligned_cols=313 Identities=19% Similarity=0.251 Sum_probs=258.7
Q ss_pred cccccccccchHHHHHHHHHHHHHHHHcccccCCCccCCCCC------------ChhHHHHHHh---hhcccccccccch
Q 014749 20 EVQSADRKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGA------------DPFYWMRVIL---ASNRGTVMELGIT 84 (419)
Q Consensus 20 ~v~~p~~~~~l~~ril~Tl~il~iy~lg~~IPlpGi~~~~~~------------~~~~~~~~if---a~~~~Slf~LGI~ 84 (419)
+..+.+|++|+|||++||++++++||+|++||+||+|.++.+ +..+++.++| |++|+|+|+|||+
T Consensus 4 ~~~~~~~~~~lr~kilfTl~~L~iyrlgs~IPlPGi~~~~~~~~~~~~~~~~~~~~~~~~l~~~~Ggal~~~SifaLGI~ 83 (431)
T 3din_C 4 AFKNAFKIPELRDRIIFTFLALIVFRMGIYIPVPGLNLEAWGEIFRRIAETAGVAGILSFYDVFTGGALSRFSVFTMSVT 83 (431)
T ss_dssp ----CCSCSCCSSHHHHHHHHHHHHHHHHSCSSCCCCC--------------------CTTHHHHCSSSSCCCSSSSSHH
T ss_pred HHHHHHcChhHHHHHHHHHHHHHHHHHHccCCCCCcCHHHHHHHHhhhccccccccHHHHHHHHcCcccccccHHHHhhH
Confidence 467789999999999999999999999999999999998752 2234455555 4689999999999
Q ss_pred HHHhHHHHHHHHhcc--cccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---cc-cccc-hhHHHHHHHH
Q 014749 85 PIVTSGLVMQLLAGS--KIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMYG---SV-SQLG-AGNAILIILQ 157 (419)
Q Consensus 85 PyItAsII~QLL~~~--kl~~l~~~~~~gr~k~~~~tr~ltl~la~iQa~~~~~~g~~~---~~-~~~~-~~~~~~ivl~ 157 (419)
||||||||||||+.. ++++++||+|+||||+|++|||+|+++|++||.+++.++.++ .. .+.+ ...+++++++
T Consensus 84 PyItAsII~QLL~~~iP~l~~l~kege~gr~ki~~~tR~lti~la~iQa~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ 163 (431)
T 3din_C 84 PYITASIILQLLASVMPSLKEMLREGEEGRKKFAKYTRRLTLLIGGFQAFFVSFSLARSNPDMVAPGVNVLQFTVLSTMS 163 (431)
T ss_dssp HHHHHHHHHHHHHHHSCSSSSCSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCCCCCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccCCchHHHHHHHHHH
Confidence 999999999999987 999999999999999999999999999999999998753232 11 2344 5678999999
Q ss_pred HHHHHHHHHHHHhhhhcccCcCcchHHHHHHHHHHHHhHhhcCcccccCCCCccchhHHHHHHHHHHhhhhhhhHHHHHH
Q 014749 158 LCFAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAF 237 (419)
Q Consensus 158 L~aG~~~v~wL~e~it~g~GiGnGiSLiI~~gI~~~~~~~~f~p~~~~~~~~~~~~g~i~~~~~~l~~~~~~~~~l~~~~ 237 (419)
||+||+++|||||+||| ||+|||+|++|++||+++++++++++.. + ..|.+
T Consensus 164 L~aGt~~lmwL~E~It~-~GiGnGiSliI~~gI~~~lp~~~~~~~~-----~--~~~~~--------------------- 214 (431)
T 3din_C 164 MLAGTMFLLWLGERITE-KGIGNGISILIFAGIVARYPSYIRQAYL-----G--GLNLL--------------------- 214 (431)
T ss_dssp HHHHHHHHHHHHHHHTT-TTCTTHHHHHHHHHHHHHSTTSSSCCSS-----C--CSCTH---------------------
T ss_pred HHHHHHHHHHHHHHHhh-cCcccchHHHHHHHHHHHHHHHHHHHhc-----c--cccHH---------------------
Confidence 99999999999999999 9999999999999999999777766531 1 11221
Q ss_pred hhcCCchHHHHHHHHHHHHHhhheeceEEEEeeeeccC-------CCccceeeeccccccchHHHHHHHHHHHHHHHHHH
Q 014749 238 YRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNA-------RGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQL 310 (419)
Q Consensus 238 ~~~~lp~l~~~~~~l~~~~~~V~l~~~~~~IPi~~~~~-------~g~~~~iPiKln~aGvmPvIfasall~~p~~i~~~ 310 (419)
+++..+++++++++++||+|++|||||+||+|. +|+++|+|+|+|||||||+|||+|++++|++++++
T Consensus 215 -----~~l~~l~~~l~vi~~vV~~~~~~rrIPvqyakr~~g~~~~~g~~~~iPlKln~aGvmPiIfassll~~p~~i~~~ 289 (431)
T 3din_C 215 -----EWIFLIAVALITIFGIILVQQAERRITIQYARRVTGRRVYGGASTYLPIKVNQGGVIPIIFASAIVSIPSAIASI 289 (431)
T ss_dssp -----HHHHHHHHHHHHHHHHTTTCCBCCCCCCCBTTTBCCCCCCCCCCCCCCCCCCCCCSSHHHHHHHHHHHHHHHTTS
T ss_pred -----HHHHHHHHHHHHHHHHHhheeeEEEEEEEechhhccccccCCCcceeeeeecccCchHHHHHHHHHHHHHHHHHH
Confidence 135667778888899999999999999999982 57899999999999999999999999999998775
Q ss_pred HhhhcCCcccccccccccccccCCCccccccccccccCCccchhhccChhHHHHHHHHHHHHHHHHHHHHHHhhCCCHHH
Q 014749 311 LYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARD 390 (419)
Q Consensus 311 l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~l~p~~~~~~~~~~~~~~iiY~~liv~~s~~Fs~~~~~i~g~~P~d 390 (419)
+. + .|. .++++|. +|+|.++|.++++ +|||||++++ +||||
T Consensus 290 ~~-----~-------~~~--------------~~~~~~~--------~~~y~~~y~~lii----~Fs~fy~~i~-~np~d 330 (431)
T 3din_C 290 TN-----N-------ETL--------------KNLFRAG--------GFLYLLIYGLLVF----FFTYFYSVVI-FDPRE 330 (431)
T ss_dssp ST-----T-------CCC--------------CCCSSTT--------HHHHHHHHHHHHH----HHHHHHHTCT-THHHH
T ss_pred cc-----h-------HHH--------------HHHcCCC--------cHHHHHHHHHHHH----HHHHHHHHHh-cCHHH
Confidence 41 1 232 2456552 4788888888777 9999999999 99999
Q ss_pred HHHHHHHcCceeccc
Q 014749 391 VAKQLKVYWSSLLCY 405 (419)
Q Consensus 391 iA~~Lkk~g~~I~~~ 405 (419)
+||||||||++|||.
T Consensus 331 iA~~lkk~G~~IpGi 345 (431)
T 3din_C 331 ISENIRKYGGYIPGL 345 (431)
T ss_dssp HTTSCCCCBCSSCCC
T ss_pred HHHHHHHCCCcCCCC
Confidence 999999999999996
No 8
>3j01_A Preprotein translocase SECY subunit; ribonucleoprotein, nucleotide-binding, PR biosynthesis, translation, zinc-finger, 70S ribosome, ribos translocon; 7.10A {Escherichia coli 536} PDB: 2akh_Y 2aki_Y
Probab=100.00 E-value=2.7e-74 Score=592.75 Aligned_cols=318 Identities=18% Similarity=0.266 Sum_probs=262.0
Q ss_pred cccchHHHHHHHHHHHHHHHHcccccCCCccCCCCCC-------hhHHHHHHh---hhcccccccccchHHHhHHHHHHH
Q 014749 26 RKIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGAD-------PFYWMRVIL---ASNRGTVMELGITPIVTSGLVMQL 95 (419)
Q Consensus 26 ~~~~l~~ril~Tl~il~iy~lg~~IPlpGi~~~~~~~-------~~~~~~~if---a~~~~Slf~LGI~PyItAsII~QL 95 (419)
..+|+|||++||++++++||+|++||+||+|.++.++ .++++.++| |++|+|+|+|||+|||||||||||
T Consensus 8 ~~~~lr~kilfTl~~L~iyrlgs~IPlPGi~~~~~~~~~~~~~~~~~~~~~~fsGGal~~~SifaLGI~PyItAsII~QL 87 (435)
T 3j01_A 8 GLGELKRRLLFVIGALIVFRIGSFIPIPGIDAAVLAKLLEQQRGTIIEMFNMFSGGALSRASIFALGIMPYISASIIIQL 87 (435)
T ss_dssp SSCSSSHHHHHHHTHHHHHHHHHSCSTTCCSSSSCCSSCSCSCSCCSSSHHHHTCCSSSCCCCSSCCSHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHccCCCCCcCHHHHHHHHhhccccHHHHHHHHcccccccccHHHHchHHHHHHHHHHHH
Confidence 4689999999999999999999999999999986542 355667777 469999999999999999999999
Q ss_pred Hhcc--cccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----ccccccchhHHHHHHHHHHHHHHHHHHH
Q 014749 96 LAGS--KIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVMSGMY-----GSVSQLGAGNAILIILQLCFAGIIVICL 168 (419)
Q Consensus 96 L~~~--kl~~l~~~~~~gr~k~~~~tr~ltl~la~iQa~~~~~~g~~-----~~~~~~~~~~~~~ivl~L~aG~~~v~wL 168 (419)
|+.. ++++++||+|+||||+|++|||+|+++|++||.+++.+... +...+.+...+++++++||+||+++|||
T Consensus 88 L~~~ip~l~~l~kege~gr~ki~~~tR~lti~la~iQa~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~L~aGt~~lmwL 167 (435)
T 3j01_A 88 LTVVHPTLAEIKKEGESGRRKISQYTRYGTLVLAIFQSIGIATGLPNMPGMQGLVINPGFAFYFTAVVSLVTGTMFLMWL 167 (435)
T ss_dssp HHHHCSSSSSCSCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGSSCCCSCCCCSCSCSTTHHHHHHHHHHHHHHHH
T ss_pred HHHhcccHHHhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 9987 89999999999999999999999999999999999875221 1112344456789999999999999999
Q ss_pred HhhhhcccCcCcchHHHHHHHHHHHHhHhhcCcccccCCCCccchhHHHHHHHHHHhhhhhhhHHHHHHhhcCCchHHHH
Q 014749 169 DELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNL 248 (419)
Q Consensus 169 ~e~it~g~GiGnGiSLiI~~gI~~~~~~~~f~p~~~~~~~~~~~~g~i~~~~~~l~~~~~~~~~l~~~~~~~~lp~l~~~ 248 (419)
||+||| ||+|||+|++|++||++++++++.+... .....+ .+. + ..++.+
T Consensus 168 ~E~It~-~GiGnGiSLiI~~gI~~~lp~~~~~~~~--~~~~~~-~~~-----------------~---------~~l~~~ 217 (435)
T 3j01_A 168 GEQITE-RGIGNGISIIIFAGIVAGLPPAIAHTIE--QARQGD-LHF-----------------L---------VLLLVA 217 (435)
T ss_dssp HHHSTT-SCCSSSHHHHHHHHHHHHSSTTSSSCCC--SSSSTT-SSS-----------------H---------HHHHHH
T ss_pred HHHHHh-cCcccccHHHHHHHHHHHHHHHHHHHHH--HHhccc-chH-----------------H---------HHHHHH
Confidence 999999 9999999999999999999555443311 000000 000 0 014556
Q ss_pred HHHHHHHHHhhheeceEEEEeeeecc-C------CCccceeeeccccccchHHHHHHHHHHHHHHHHHHHhhhcCCcccc
Q 014749 249 LATVLVFLIVVYFQGFKVVLPVRSKN-A------RGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFV 321 (419)
Q Consensus 249 ~~~l~~~~~~V~l~~~~~~IPi~~~~-~------~g~~~~iPiKln~aGvmPvIfasall~~p~~i~~~l~~~~~~~~~~ 321 (419)
++++++++++||+|++|||||+||+| + +|+++|+|+|+|||||||+|||+|++++|+++++++.+. +.
T Consensus 218 ~~~l~vi~~vV~~~~~~rrIPvqyakr~~g~~~~~g~~s~iPlKln~aGvmPiIfassll~~p~~i~~~~~~~---~~-- 292 (435)
T 3j01_A 218 VLVFAVTFFVVFVERGQRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIPAIFASSIILFPATIASWFGGG---TG-- 292 (435)
T ss_dssp HHHHHHHHHTTCCCCCSCCCCCCCCCCCSSCCCCCCCCCCCSCCCCCSSCSCSSHHHHHHHHHHHHHHHSSSC---CC--
T ss_pred HHHHHHHHHHHHhheeEEEEEEEehhhhccccccCCCCceeeeeeccccchHHHHHHHHHHHHHHHHHHccCC---cc--
Confidence 67777888999999999999999987 3 468899999999999999999999999999999875321 10
Q ss_pred cccccccccccCCCccccccccccccCCccchhhccChhHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHcCce
Q 014749 322 NLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKVYWSS 401 (419)
Q Consensus 322 ~~l~~~~~~~~~~~~~~~~g~~~~l~p~~~~~~~~~~~~~~iiY~~liv~~s~~Fs~~~~~i~g~~P~diA~~Lkk~g~~ 401 (419)
+.|. +++.+|++|+ +|+|.++|.++++ +|+|||++++ +||||+||||||||++
T Consensus 293 ---~~~~-----------~~~~~~l~~~--------~~~~~~~y~~lii----~F~~fyt~i~-~np~diA~~lkk~G~~ 345 (435)
T 3j01_A 293 ---WNWL-----------TTISLYLQPG--------QPLYVLLYASAII----FFCFFYTALV-FNPRETADNLKKSGAF 345 (435)
T ss_dssp ---SSCC-----------SSSSCCCCSS--------GGGGTHHHHHHHH----HHHHHHHHHS-SCTTHHHHHTTSTTCS
T ss_pred ---hhHH-----------HHHHHHcCCC--------CcHHHHHHHHHHH----HHHHHHHHHc-cCHHHHHHHHHHcCCc
Confidence 1242 2455778764 5899999999988 8899999996 9999999999999999
Q ss_pred eccc
Q 014749 402 LLCY 405 (419)
Q Consensus 402 I~~~ 405 (419)
|||.
T Consensus 346 IpGi 349 (435)
T 3j01_A 346 VPGI 349 (435)
T ss_dssp SSCC
T ss_pred CCCc
Confidence 9996
No 9
>1nkw_F 50S ribosomal protein L9; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1nwx_F* 1nwy_F* 1sm1_F* 1xbp_F* 1pnu_F 1pny_F 1vor_I 1vou_I 1vow_I 1voy_I 1vp0_I
Probab=13.14 E-value=95 Score=26.63 Aligned_cols=20 Identities=20% Similarity=0.056 Sum_probs=16.8
Q ss_pred CCHHHHHHHHHHcCceeccc
Q 014749 386 SSARDVAKQLKVYWSSLLCY 405 (419)
Q Consensus 386 ~~P~diA~~Lkk~g~~I~~~ 405 (419)
++++||||.|+++|..|.=-
T Consensus 91 Vt~~dIa~al~~~g~~idk~ 110 (146)
T 1nkw_F 91 VTHQDVANSLDQLGFDVDRR 110 (146)
T ss_pred cCHHHHHHHHHHcCCeechh
Confidence 68999999999998877543
No 10
>3mp7_A Preprotein translocase subunit SECY; protein transport, membrane protein complex, preprotein TRAN membrane insertion,; 2.90A {Pyrococcus furiosus} SCOP: f.41.1.0
Probab=10.09 E-value=2.8e+02 Score=28.40 Aligned_cols=26 Identities=15% Similarity=0.346 Sum_probs=19.7
Q ss_pred HhhhhcccCcCcchHHHHHHHHHHHHhHh
Q 014749 169 DELLQKGYGLGSGISLFIATNICESIIWK 197 (419)
Q Consensus 169 ~e~it~g~GiGnGiSLiI~~gI~~~~~~~ 197 (419)
.|.... .| +|+|++|.++++-+...+
T Consensus 424 p~~l~~-~g--gGTslLI~VgV~~~~~~q 449 (482)
T 3mp7_A 424 ADFLGA-LG--TGTGILLTVGILYRFYEE 449 (482)
T ss_dssp HHHHTC-SS--CSHHHHHHHHHHHHHHHH
T ss_pred HHHHhc-cC--CceeeeeeHHHHHHHHHH
Confidence 466654 55 699999999998887544
Done!