BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014750
(419 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 501 bits (1290), Expect = e-142, Method: Compositional matrix adjust.
Identities = 234/362 (64%), Positives = 290/362 (80%), Gaps = 4/362 (1%)
Query: 59 GHIISTTIG--GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY 116
G ++T + G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+
Sbjct: 28 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF 87
Query: 117 KNRELQLMRLMDHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
KNRELQ+MR +DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +
Sbjct: 88 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 147
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
P+IYVKLY YQ+FR LAYIH+ G+CHRD+KPQNLL+DP T +KLCDFGSAK LV+GE
Sbjct: 148 PVIYVKLYMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 206
Query: 236 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV 295
N+SYICSRYYRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKV
Sbjct: 207 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 266
Query: 296 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTAL 355
LGTPTRE+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T L
Sbjct: 267 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 326
Query: 356 EACAHPFFDELREPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRRQTGLSMPH 415
EACAH FFDELR+PN +LPNGR P LFNF + ++P L LIP H R Q S P
Sbjct: 327 EACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTPT 386
Query: 416 SA 417
+A
Sbjct: 387 NA 388
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 501 bits (1289), Expect = e-142, Method: Compositional matrix adjust.
Identities = 234/362 (64%), Positives = 290/362 (80%), Gaps = 4/362 (1%)
Query: 59 GHIISTTIG--GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY 116
G ++T + G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+
Sbjct: 34 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF 93
Query: 117 KNRELQLMRLMDHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
KNRELQ+MR +DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +
Sbjct: 94 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 153
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
P+IYVKLY YQ+FR LAYIH+ G+CHRD+KPQNLL+DP T +KLCDFGSAK LV+GE
Sbjct: 154 PVIYVKLYMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 212
Query: 236 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV 295
N+SYICSRYYRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKV
Sbjct: 213 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 272
Query: 296 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTAL 355
LGTPTRE+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T L
Sbjct: 273 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 332
Query: 356 EACAHPFFDELREPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRRQTGLSMPH 415
EACAH FFDELR+PN +LPNGR P LFNF + ++P L LIP H R Q S P
Sbjct: 333 EACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTPT 392
Query: 416 SA 417
+A
Sbjct: 393 NA 394
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 501 bits (1289), Expect = e-142, Method: Compositional matrix adjust.
Identities = 234/362 (64%), Positives = 290/362 (80%), Gaps = 4/362 (1%)
Query: 59 GHIISTTIG--GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY 116
G ++T + G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+
Sbjct: 36 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF 95
Query: 117 KNRELQLMRLMDHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
KNRELQ+MR +DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +
Sbjct: 96 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 155
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
P+IYVKLY YQ+FR LAYIH+ G+CHRD+KPQNLL+DP T +KLCDFGSAK LV+GE
Sbjct: 156 PVIYVKLYMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 214
Query: 236 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV 295
N+SYICSRYYRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKV
Sbjct: 215 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 274
Query: 296 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTAL 355
LGTPTRE+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T L
Sbjct: 275 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 334
Query: 356 EACAHPFFDELREPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRRQTGLSMPH 415
EACAH FFDELR+PN +LPNGR P LFNF + ++P L LIP H R Q S P
Sbjct: 335 EACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTPT 394
Query: 416 SA 417
+A
Sbjct: 395 NA 396
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 500 bits (1288), Expect = e-142, Method: Compositional matrix adjust.
Identities = 234/362 (64%), Positives = 290/362 (80%), Gaps = 4/362 (1%)
Query: 59 GHIISTTIG--GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY 116
G ++T + G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+
Sbjct: 79 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF 138
Query: 117 KNRELQLMRLMDHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
KNRELQ+MR +DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +
Sbjct: 139 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 198
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
P+IYVKLY YQ+FR LAYIH+ G+CHRD+KPQNLL+DP T +KLCDFGSAK LV+GE
Sbjct: 199 PVIYVKLYMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 257
Query: 236 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV 295
N+SYICSRYYRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKV
Sbjct: 258 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 317
Query: 296 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTAL 355
LGTPTRE+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T L
Sbjct: 318 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 377
Query: 356 EACAHPFFDELREPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRRQTGLSMPH 415
EACAH FFDELR+PN +LPNGR P LFNF + ++P L LIP H R Q S P
Sbjct: 378 EACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTPT 437
Query: 416 SA 417
+A
Sbjct: 438 NA 439
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 500 bits (1288), Expect = e-142, Method: Compositional matrix adjust.
Identities = 234/362 (64%), Positives = 290/362 (80%), Gaps = 4/362 (1%)
Query: 59 GHIISTTIG--GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY 116
G ++T + G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+
Sbjct: 38 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF 97
Query: 117 KNRELQLMRLMDHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
KNRELQ+MR +DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +
Sbjct: 98 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 157
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
P+IYVKLY YQ+FR LAYIH+ G+CHRD+KPQNLL+DP T +KLCDFGSAK LV+GE
Sbjct: 158 PVIYVKLYMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 216
Query: 236 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV 295
N+SYICSRYYRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKV
Sbjct: 217 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 276
Query: 296 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTAL 355
LGTPTRE+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T L
Sbjct: 277 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 336
Query: 356 EACAHPFFDELREPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRRQTGLSMPH 415
EACAH FFDELR+PN +LPNGR P LFNF + ++P L LIP H R Q S P
Sbjct: 337 EACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTPT 396
Query: 416 SA 417
+A
Sbjct: 397 NA 398
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 499 bits (1285), Expect = e-141, Method: Compositional matrix adjust.
Identities = 232/351 (66%), Positives = 285/351 (81%), Gaps = 2/351 (0%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM 127
G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+KNRELQ+MR +
Sbjct: 16 GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL 75
Query: 128 DHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ 186
DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +P+IYVKLY YQ
Sbjct: 76 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 135
Query: 187 IFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYR 246
+FR LAYIH+ G+CHRD+KPQNLL+DP T +KLCDFGSAK LV+GE N+SYICSRYYR
Sbjct: 136 LFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 194
Query: 247 APELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 306
APELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE+IR
Sbjct: 195 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 254
Query: 307 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 366
MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH FFDEL
Sbjct: 255 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 314
Query: 367 REPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRRQTGLSMPHSA 417
R+PN +LPNGR P LFNF + ++P L LIP H R Q S P +A
Sbjct: 315 RDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTPTNA 365
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 498 bits (1281), Expect = e-141, Method: Compositional matrix adjust.
Identities = 233/362 (64%), Positives = 289/362 (79%), Gaps = 4/362 (1%)
Query: 59 GHIISTTIG--GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY 116
G ++T + G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+
Sbjct: 34 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF 93
Query: 117 KNRELQLMRLMDHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
KNRELQ+MR +DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +
Sbjct: 94 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 153
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
P+IYVKLY YQ+FR LAYIH+ G+CHRD+KPQNLL+DP T +KLCDFGSAK LV+GE
Sbjct: 154 PVIYVKLYMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 212
Query: 236 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV 295
N+S ICSRYYRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKV
Sbjct: 213 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 272
Query: 296 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTAL 355
LGTPTRE+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T L
Sbjct: 273 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 332
Query: 356 EACAHPFFDELREPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRRQTGLSMPH 415
EACAH FFDELR+PN +LPNGR P LFNF + ++P L LIP H R Q S P
Sbjct: 333 EACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTPT 392
Query: 416 SA 417
+A
Sbjct: 393 NA 394
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 498 bits (1281), Expect = e-141, Method: Compositional matrix adjust.
Identities = 233/359 (64%), Positives = 288/359 (80%), Gaps = 4/359 (1%)
Query: 59 GHIISTTIG--GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY 116
G ++T + G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+
Sbjct: 13 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF 72
Query: 117 KNRELQLMRLMDHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
KNRELQ+MR +DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +
Sbjct: 73 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 132
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
P+IYVKLY YQ+FR LAYIH+ G+CHRD+KPQNLL+DP T +KLCDFGSAK LV+GE
Sbjct: 133 PVIYVKLYMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 191
Query: 236 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV 295
N+SYICSRYYRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKV
Sbjct: 192 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 251
Query: 296 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTAL 355
LGTPTRE+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T L
Sbjct: 252 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 311
Query: 356 EACAHPFFDELREPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRRQTGLSMP 414
EACAH FFDELR+PN +LPNGR P LFNF + ++P L LIP H R Q S P
Sbjct: 312 EACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTP 370
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 497 bits (1279), Expect = e-141, Method: Compositional matrix adjust.
Identities = 233/363 (64%), Positives = 289/363 (79%), Gaps = 4/363 (1%)
Query: 59 GHIISTTIG--GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY 116
G ++T + G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+
Sbjct: 12 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF 71
Query: 117 KNRELQLMRLMDHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
KNRELQ+MR +DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +
Sbjct: 72 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 131
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
P+IYVKLY YQ+FR LAYIH+ G+CHRD+KPQNLL+DP T +KLCDFGSAK LV+GE
Sbjct: 132 PVIYVKLYMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 190
Query: 236 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV 295
N+S ICSRYYRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKV
Sbjct: 191 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 250
Query: 296 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTAL 355
LGTPTRE+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T L
Sbjct: 251 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 310
Query: 356 EACAHPFFDELREPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRRQTGLSMPH 415
EACAH FFDELR+PN +LPNGR P LFNF + ++P L LIP H R Q S P
Sbjct: 311 EACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTPT 370
Query: 416 SAG 418
+A
Sbjct: 371 NAA 373
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 495 bits (1274), Expect = e-140, Method: Compositional matrix adjust.
Identities = 232/359 (64%), Positives = 287/359 (79%), Gaps = 4/359 (1%)
Query: 59 GHIISTTIG--GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY 116
G ++T + G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+
Sbjct: 8 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF 67
Query: 117 KNRELQLMRLMDHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
KNRELQ+MR +DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +
Sbjct: 68 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 127
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
P+IYVKLY YQ+FR LAYIH+ G+CHRD+KPQNLL+DP T +KLCDFGSAK LV+GE
Sbjct: 128 PVIYVKLYMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 186
Query: 236 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV 295
N+S ICSRYYRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKV
Sbjct: 187 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 246
Query: 296 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTAL 355
LGTPTRE+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T L
Sbjct: 247 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 306
Query: 356 EACAHPFFDELREPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRRQTGLSMP 414
EACAH FFDELR+PN +LPNGR P LFNF + ++P L LIP H R Q S P
Sbjct: 307 EACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTP 365
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 494 bits (1273), Expect = e-140, Method: Compositional matrix adjust.
Identities = 232/359 (64%), Positives = 287/359 (79%), Gaps = 4/359 (1%)
Query: 59 GHIISTTIG--GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY 116
G ++T + G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+
Sbjct: 19 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF 78
Query: 117 KNRELQLMRLMDHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
KNRELQ+MR +DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +
Sbjct: 79 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 138
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
P+IYVKLY YQ+FR LAYIH+ G+CHRD+KPQNLL+DP T +KLCDFGSAK LV+GE
Sbjct: 139 PVIYVKLYMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 197
Query: 236 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV 295
N+S ICSRYYRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKV
Sbjct: 198 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 257
Query: 296 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTAL 355
LGTPTRE+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T L
Sbjct: 258 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 317
Query: 356 EACAHPFFDELREPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRRQTGLSMP 414
EACAH FFDELR+PN +LPNGR P LFNF + ++P L LIP H R Q S P
Sbjct: 318 EACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTP 376
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 494 bits (1273), Expect = e-140, Method: Compositional matrix adjust.
Identities = 232/359 (64%), Positives = 287/359 (79%), Gaps = 4/359 (1%)
Query: 59 GHIISTTIG--GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY 116
G ++T + G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+
Sbjct: 12 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF 71
Query: 117 KNRELQLMRLMDHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
KNRELQ+MR +DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +
Sbjct: 72 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 131
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
P+IYVKLY YQ+FR LAYIH+ G+CHRD+KPQNLL+DP T +KLCDFGSAK LV+GE
Sbjct: 132 PVIYVKLYMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 190
Query: 236 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV 295
N+S ICSRYYRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKV
Sbjct: 191 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 250
Query: 296 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTAL 355
LGTPTRE+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T L
Sbjct: 251 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 310
Query: 356 EACAHPFFDELREPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRRQTGLSMP 414
EACAH FFDELR+PN +LPNGR P LFNF + ++P L LIP H R Q S P
Sbjct: 311 EACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTP 369
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 491 bits (1264), Expect = e-139, Method: Compositional matrix adjust.
Identities = 228/340 (67%), Positives = 280/340 (82%), Gaps = 2/340 (0%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM 127
G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+KNRELQ+MR +
Sbjct: 11 GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL 70
Query: 128 DHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ 186
DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +P+IYVKLY YQ
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 187 IFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYR 246
+FR LAYIH+ G+CHRD+KPQNLL+DP T +KLCDFGSAK LV+GE N+SYICSRYYR
Sbjct: 131 LFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 189
Query: 247 APELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 306
APELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE+IR
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 307 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 366
MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH FFDEL
Sbjct: 250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
Query: 367 REPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVR 406
R+PN +LPNGR P LFNF + ++P L LIP H R
Sbjct: 310 RDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHAR 349
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 489 bits (1258), Expect = e-138, Method: Compositional matrix adjust.
Identities = 228/342 (66%), Positives = 280/342 (81%), Gaps = 2/342 (0%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM 127
G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+KNRELQ+MR +
Sbjct: 11 GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL 70
Query: 128 DHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ 186
DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +P+IYVKLY YQ
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 187 IFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYR 246
+FR LAYIH+ G+CHRD+KPQNLL+DP T +KLCDFGSAK LV+GE N+S ICSRYYR
Sbjct: 131 LFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 189
Query: 247 APELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 306
APELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE+IR
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 307 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 366
MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH FFDEL
Sbjct: 250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
Query: 367 REPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRRQ 408
R+PN +LPNGR P LFNF + ++P L LIP H R Q
Sbjct: 310 RDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQ 351
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 489 bits (1258), Expect = e-138, Method: Compositional matrix adjust.
Identities = 229/351 (65%), Positives = 284/351 (80%), Gaps = 4/351 (1%)
Query: 59 GHIISTTIG--GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY 116
G ++T + G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+
Sbjct: 4 GSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF 63
Query: 117 KNRELQLMRLMDHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
KNRELQ+MR +DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +
Sbjct: 64 KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL 123
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
P+IYVKLY YQ+FR LAYIH+ G+CHRD+KPQNLL+DP T +KLCDFGSAK LV+GE
Sbjct: 124 PVIYVKLYMYQLFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 182
Query: 236 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV 295
N+S ICSRYYRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKV
Sbjct: 183 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKV 242
Query: 296 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTAL 355
LGTPTRE+IR MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T L
Sbjct: 243 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL 302
Query: 356 EACAHPFFDELREPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVR 406
EACAH FFDELR+PN +LPNGR P LFNF + ++P L LIP H R
Sbjct: 303 EACAHSFFDELRDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHAR 353
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 488 bits (1256), Expect = e-138, Method: Compositional matrix adjust.
Identities = 227/340 (66%), Positives = 279/340 (82%), Gaps = 2/340 (0%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM 127
G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+KNRELQ+MR +
Sbjct: 11 GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL 70
Query: 128 DHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ 186
DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +P+IYVKLY YQ
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 187 IFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYR 246
+FR LAYIH+ G+CHRD+KPQNLL+DP T +KLCDFGSAK LV+GE N+S ICSRYYR
Sbjct: 131 LFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 189
Query: 247 APELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 306
APELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE+IR
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 307 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 366
MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH FFDEL
Sbjct: 250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
Query: 367 REPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVR 406
R+PN +LPNGR P LFNF + ++P L LIP H R
Sbjct: 310 RDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHAR 349
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 488 bits (1255), Expect = e-138, Method: Compositional matrix adjust.
Identities = 227/340 (66%), Positives = 279/340 (82%), Gaps = 2/340 (0%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM 127
G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+KNRELQ+MR +
Sbjct: 12 GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL 71
Query: 128 DHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ 186
DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +P+IYVKLY YQ
Sbjct: 72 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 131
Query: 187 IFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYR 246
+FR LAYIH+ G+CHRD+KPQNLL+DP T +KLCDFGSAK LV+GE N+S ICSRYYR
Sbjct: 132 LFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 190
Query: 247 APELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 306
APELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE+IR
Sbjct: 191 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 250
Query: 307 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 366
MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH FFDEL
Sbjct: 251 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 310
Query: 367 REPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVR 406
R+PN +LPNGR P LFNF + ++P L LIP H R
Sbjct: 311 RDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHAR 350
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 485 bits (1249), Expect = e-137, Method: Compositional matrix adjust.
Identities = 227/342 (66%), Positives = 278/342 (81%), Gaps = 2/342 (0%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM 127
G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQ + +KNRELQ+MR +
Sbjct: 11 GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKL 70
Query: 128 DHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ 186
DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +P+IYVKLY YQ
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 187 IFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYR 246
+FR LAYIH+ G+CHRD+KPQNLL+DP T +KLCDFGSAK LV+GE N+SYICSRYYR
Sbjct: 131 LFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 189
Query: 247 APELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 306
APELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE+IR
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 307 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 366
MNPNYT+F FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH FFDEL
Sbjct: 250 MNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
Query: 367 REPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRRQ 408
R+PN +LPNGR P LFNF + ++P L LIP H R Q
Sbjct: 310 RDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQ 351
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 485 bits (1249), Expect = e-137, Method: Compositional matrix adjust.
Identities = 226/340 (66%), Positives = 278/340 (81%), Gaps = 2/340 (0%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM 127
G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQ + +KNRELQ+MR +
Sbjct: 11 GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKL 70
Query: 128 DHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ 186
DH N++ L++ F+S+ KDE++LNLV++YVPET+YRV +HYS Q +P+IYVKLY YQ
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 187 IFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYR 246
+FR LAYIH+ G+CHRD+KPQNLL+DP T +KLCDFGSAK LV+GE N+SYICSRYYR
Sbjct: 131 LFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 189
Query: 247 APELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 306
APELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE+IR
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 307 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 366
MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH FFDEL
Sbjct: 250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
Query: 367 REPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVR 406
R+PN +LPNGR P LFNF + ++P L LIP H R
Sbjct: 310 RDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHAR 349
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 484 bits (1247), Expect = e-137, Method: Compositional matrix adjust.
Identities = 226/340 (66%), Positives = 278/340 (81%), Gaps = 2/340 (0%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM 127
G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQD+R+KNRELQ+MR +
Sbjct: 11 GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKL 70
Query: 128 DHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ 186
DH N++ L++ F+S+ KD ++LNLV++YVPET+YRV +HYS Q +P+IYVKLY YQ
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 187 IFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYR 246
+FR LAYIH+ G+CHRD+KPQNLL+DP T +KLCDFGSAK LV+GE N+S ICSRYYR
Sbjct: 131 LFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 189
Query: 247 APELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 306
APELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE+IR
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 307 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 366
MNPNYT+F+FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH FFDEL
Sbjct: 250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
Query: 367 REPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVR 406
R+PN +LPNGR P LFNF + ++P L LIP H R
Sbjct: 310 RDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHAR 349
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 479 bits (1233), Expect = e-135, Method: Compositional matrix adjust.
Identities = 224/340 (65%), Positives = 275/340 (80%), Gaps = 2/340 (0%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM 127
G+ + Q +SY +V+G GSFG+V+QAK ++GE VAIKKVLQ + +KNRELQ+MR +
Sbjct: 11 GQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKL 70
Query: 128 DHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ 186
DH N++ L++ F+S+ KDE++LNLV++YVP T+YRV +HYS Q +P+IYVKLY YQ
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 187 IFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYR 246
+FR LAYIH+ G+CHRD+KPQNLL+DP T +KLCDFGSAK LV+GE N+S ICSRYYR
Sbjct: 131 LFRSLAYIHSF-GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 189
Query: 247 APELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 306
APELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE+IR
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249
Query: 307 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 366
MNPNYT+F FPQIKAHPW KVF R PPEAI L SRLL+Y+P+ R T LEACAH FFDEL
Sbjct: 250 MNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
Query: 367 REPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVR 406
R+PN +LPNGR P LFNF + ++P L LIP H R
Sbjct: 310 RDPNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHAR 349
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 469 bits (1207), Expect = e-132, Method: Compositional matrix adjust.
Identities = 217/342 (63%), Positives = 276/342 (80%), Gaps = 4/342 (1%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM 127
GK GE ++ I+Y +V+G GSFG+VFQAK +E+ E VAIKKVLQD+R+KNRELQ+MR++
Sbjct: 32 GKTGEQRE-IAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNRELQIMRIV 89
Query: 128 DHPNVISLKHCFFST-TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ 186
HPNV+ LK F+S KDE+FLNLV+EYVPET+YR +HY+ + Q MP++ +KLY YQ
Sbjct: 90 KHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQ 149
Query: 187 IFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYR 246
+ R LAYIH++ G+CHRD+KPQNLL+DP + +KL DFGSAK+L+ GE N+S ICSRYYR
Sbjct: 150 LLRSLAYIHSI-GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYR 208
Query: 247 APELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 306
APELIFGAT YTT+IDIWS GCV+AEL+ GQPLFPGE+ +DQLVEIIKVLGTP+RE+I+
Sbjct: 209 APELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKT 268
Query: 307 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 366
MNPNY + +FPQI+ HP+ KVF R PP+AIDL SRLL+Y+PS R TA+EA HPFFDEL
Sbjct: 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL 328
Query: 367 REPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRRQ 408
R AR+PNGR PPLFN+ +E P+LI+RL+P+H +
Sbjct: 329 RTGEARMPNGRELPPLFNWTKEELSVRPDLISRLVPQHAEAE 370
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 331 bits (849), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 164/369 (44%), Positives = 238/369 (64%), Gaps = 44/369 (11%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHC 138
Y + +GTGSFGIV + +E+G+ A+KKVLQD RYKNREL +M+++DH N+I L
Sbjct: 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDY 68
Query: 139 FFSTTSKD---------------------------------ELFLNLVMEYVPETMYRVL 165
F++T ++ +LN++MEYVP+T+++VL
Sbjct: 69 FYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVL 128
Query: 166 KHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG 225
K + + +P+ + +Y YQ+FR + +IH++ G+CHRD+KPQNLLV+ + +KLCDFG
Sbjct: 129 KSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL-GICHRDIKPQNLLVNSKDNTLKLCDFG 187
Query: 226 SAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENA 285
SAK L+ E +++ ICSR+YRAPEL+ GATEYT SID+WS GCV EL+LG+PLF GE +
Sbjct: 188 SAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETS 247
Query: 286 VDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQ 345
+DQLV II+++GTPT+E++ MNP+YT+ RFP +KA W K+ + P AIDL ++L+
Sbjct: 248 IDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILR 307
Query: 346 YSPSLRCTALEACAHPFFDELREP-------NARLPNG--RPFPPLFNFK-QELAGASPE 395
Y P LR EA AHPFFD LR N+ P+G + P LFNF EL+
Sbjct: 308 YEPDLRINPYEAMAHPFFDHLRNSYESEVKNNSNFPHGVNQNIPQLFNFSPYELSIIPGN 367
Query: 396 LINRLIPEH 404
++NR++P++
Sbjct: 368 VLNRILPKN 376
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 303 bits (777), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 150/322 (46%), Positives = 211/322 (65%), Gaps = 10/322 (3%)
Query: 74 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMR---LMDHP 130
K+ + ER+ G G+FG V K TG +VAIKKV+QD R++NRELQ+M+ ++ HP
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHP 79
Query: 131 NVISLKHCFFSTTSKD--ELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIF 188
N++ L+ F++ +D +++LN+VMEYVP+T++R ++Y P I +K++ +Q+
Sbjct: 80 NIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLI 139
Query: 189 RGLAYIHTVP-GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRA 247
R + +H VCHRD+KP N+LV+ +KLCDFGSAK L E N++YICSRYYRA
Sbjct: 140 RSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRA 199
Query: 248 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 307
PELIFG YTT++DIWS GC+ AE++LG+P+F G+N+ QL EI++VLG P+RE +R +
Sbjct: 200 PELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKL 259
Query: 308 NPNYTDFRFPQIKAHPWHKVFHK---RMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 364
NP++TD K PW VF + EA DL S LLQY P R EA HP+FD
Sbjct: 260 NPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFD 319
Query: 365 ELREPNARLPNGRPFPP-LFNF 385
EL +P +LPN + P LF F
Sbjct: 320 ELHDPATKLPNNKDLPEDLFRF 341
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/347 (33%), Positives = 189/347 (54%), Gaps = 27/347 (7%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNR---ELQLMRLMDHPNVI 133
Y + +G G++G+V A VAIKK+ + + Y R E+Q++ H NVI
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
++ ++T + + +V + + +Y++LK +Q++ ++ + YQI RGL Y
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLK-----SQQLSNDHICYFLYQILRGLKY 159
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISY----ICSRYYRAPE 249
IH+ V HRD+KP NLL++ T +K+CDFG A++ + + + +R+YRAPE
Sbjct: 160 IHSA-NVLHRDLKPSNLLINT-TCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPE 217
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM-- 307
++ + YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 277
Query: 308 --NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 365
NY P W K+F K +A+DL R+L ++P+ R T EA AHP+ ++
Sbjct: 278 MKARNYLQ-SLPSKTKVAWAKLFPKS-DSKALDLLDRMLTFNPNKRITVEEALAHPYLEQ 335
Query: 366 LREPNARLPNGRPFPPLFNFKQELAGASPELINRLI-PEHVRRQTGL 411
+P P F F EL E + LI E R Q G+
Sbjct: 336 YYDPTDEPVAEEP----FTFAMELDDLPKERLKELIFQETARFQPGV 378
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 177 bits (450), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 181/336 (53%), Gaps = 26/336 (7%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
+ T + + +V + + +Y++LK Q + ++ + YQI RGL YIH+
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 148
Query: 200 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS----YICSRYYRAPELIFGAT 255
V HRD+KP NLL++ T +K+CDFG A+V + Y+ +R+YRAPE++ +
Sbjct: 149 VLHRDLKPSNLLLNT-TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 256 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNY 311
YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 267
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNA 371
P PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+
Sbjct: 268 L-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 325
Query: 372 RLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRR 407
P F F EL E + LI E R
Sbjct: 326 EPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 357
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 181/336 (53%), Gaps = 26/336 (7%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
+ T + + +V + + +Y++LK Q + ++ + YQI RGL YIH+
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 144
Query: 200 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI----SYICSRYYRAPELIFGAT 255
V HRD+KP NLL++ T +K+CDFG A+V + Y+ +R+YRAPE++ +
Sbjct: 145 VLHRDLKPSNLLLNT-TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 256 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNY 311
YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 204 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 263
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNA 371
P PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+
Sbjct: 264 L-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 321
Query: 372 RLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRR 407
P F F EL E + LI E R
Sbjct: 322 EPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 353
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 180/336 (53%), Gaps = 26/336 (7%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
+ T + + LV + +Y++LK Q + ++ + YQI RGL YIH+
Sbjct: 111 RAPTIEQMKDVYLVTHLMGADLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 164
Query: 200 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS----YICSRYYRAPELIFGAT 255
V HRD+KP NLL++ T +K+CDFG A+V + Y+ +R+YRAPE++ +
Sbjct: 165 VLHRDLKPSNLLLNT-TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 223
Query: 256 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNY 311
YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 224 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 283
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNA 371
P PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+
Sbjct: 284 L-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 341
Query: 372 RLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRR 407
P F F EL E + LI E R
Sbjct: 342 EPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 373
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 181/336 (53%), Gaps = 26/336 (7%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
+ T + + +V + + +Y++LK Q + ++ + YQI RGL YIH+
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 148
Query: 200 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS----YICSRYYRAPELIFGAT 255
V HRD+KP NLL++ T +K+CDFG A+V + Y+ +R+YRAPE++ +
Sbjct: 149 VLHRDLKPSNLLLNT-TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 256 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNY 311
YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 267
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNA 371
P PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+
Sbjct: 268 L-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 325
Query: 372 RLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRR 407
P F F EL E + LI E R
Sbjct: 326 EPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 357
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 181/336 (53%), Gaps = 26/336 (7%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
+ T + + +V + + +Y++LK Q + ++ + YQI RGL YIH+
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 152
Query: 200 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS----YICSRYYRAPELIFGAT 255
V HRD+KP NLL++ T +K+CDFG A+V + Y+ +R+YRAPE++ +
Sbjct: 153 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 211
Query: 256 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNY 311
YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 212 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 271
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNA 371
P PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+
Sbjct: 272 L-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 329
Query: 372 RLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRR 407
P F F EL E + LI E R
Sbjct: 330 EPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 361
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 181/336 (53%), Gaps = 26/336 (7%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
+ T + + +V + + +Y++LK Q + ++ + YQI RGL YIH+
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 144
Query: 200 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS----YICSRYYRAPELIFGAT 255
V HRD+KP NLL++ T +K+CDFG A+V + Y+ +R+YRAPE++ +
Sbjct: 145 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 256 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNY 311
YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 204 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 263
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNA 371
P PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+
Sbjct: 264 L-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 321
Query: 372 RLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRR 407
P F F EL E + LI E R
Sbjct: 322 EPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 353
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 181/336 (53%), Gaps = 26/336 (7%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
+ T + + +V + + +Y++LK Q + ++ + YQI RGL YIH+
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 164
Query: 200 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS----YICSRYYRAPELIFGAT 255
V HRD+KP NLL++ T +K+CDFG A+V + Y+ +R+YRAPE++ +
Sbjct: 165 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 223
Query: 256 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNY 311
YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 224 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 283
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNA 371
P PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+
Sbjct: 284 L-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 341
Query: 372 RLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRR 407
P F F EL E + LI E R
Sbjct: 342 EPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 373
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 181/336 (53%), Gaps = 26/336 (7%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
+ T + + +V + + +Y++LK Q + ++ + YQI RGL YIH+
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 146
Query: 200 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI----SYICSRYYRAPELIFGAT 255
V HRD+KP NLL++ T +K+CDFG A+V + Y+ +R+YRAPE++ +
Sbjct: 147 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 256 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNY 311
YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 206 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 265
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNA 371
P PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+
Sbjct: 266 L-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 323
Query: 372 RLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRR 407
P F F EL E + LI E R
Sbjct: 324 EPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 355
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 181/339 (53%), Gaps = 32/339 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNR---ELQLMRLMDHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R E++++ H N+I +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
+ T + + +V + + +Y++LK Q + ++ + YQI RGL YIH+
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 146
Query: 200 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS----YICSRYYRAPELIFGAT 255
V HRD+KP NLL++ T +K+CDFG A+V + Y+ +R+YRAPE++ +
Sbjct: 147 VLHRDLKPSNLLLNT-TSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 256 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC-MNPNYTDF 314
YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C +N ++
Sbjct: 206 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKARNY 265
Query: 315 --RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHP----FFDELRE 368
P PW+++F +A+DL ++L ++P R +A AHP ++D E
Sbjct: 266 LLSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYDPSDE 324
Query: 369 PNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRR 407
P A P F F EL E + LI E R
Sbjct: 325 PIAEAP--------FKFDMELDDLPKEKLKELIFEETAR 355
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 181/336 (53%), Gaps = 26/336 (7%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
+ T + + +V + + +Y++LK Q + ++ + YQI RGL YIH+
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 144
Query: 200 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI----SYICSRYYRAPELIFGAT 255
V HRD+KP NLL++ T +K+CDFG A+V + Y+ +R+YRAPE++ +
Sbjct: 145 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 256 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNY 311
YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 204 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 263
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNA 371
P PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+
Sbjct: 264 L-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 321
Query: 372 RLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRR 407
P F F EL E + LI E R
Sbjct: 322 EPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 353
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 181/336 (53%), Gaps = 26/336 (7%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
+ T + + +V + + +Y++LK Q + ++ + YQI RGL YIH+
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 149
Query: 200 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS----YICSRYYRAPELIFGAT 255
V HRD+KP NLL++ T +K+CDFG A+V + Y+ +R+YRAPE++ +
Sbjct: 150 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 208
Query: 256 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNY 311
YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 209 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 268
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNA 371
P PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+
Sbjct: 269 L-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 326
Query: 372 RLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRR 407
P F F EL E + LI E R
Sbjct: 327 EPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 358
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 181/336 (53%), Gaps = 26/336 (7%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
+ T + + +V + + +Y++LK Q + ++ + YQI RGL YIH+
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 150
Query: 200 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS----YICSRYYRAPELIFGAT 255
V HRD+KP NLL++ T +K+CDFG A+V + Y+ +R+YRAPE++ +
Sbjct: 151 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 209
Query: 256 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNY 311
YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 210 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 269
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNA 371
P PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+
Sbjct: 270 L-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 327
Query: 372 RLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRR 407
P F F EL E + LI E R
Sbjct: 328 EPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 359
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 181/336 (53%), Gaps = 26/336 (7%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
+ T + + +V + + +Y++LK Q + ++ + YQI RGL YIH+
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 141
Query: 200 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS----YICSRYYRAPELIFGAT 255
V HRD+KP NLL++ T +K+CDFG A+V + Y+ +R+YRAPE++ +
Sbjct: 142 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 200
Query: 256 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNY 311
YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 201 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 260
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNA 371
P PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+
Sbjct: 261 L-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 318
Query: 372 RLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRR 407
P F F EL E + LI E R
Sbjct: 319 EPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 350
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 181/336 (53%), Gaps = 26/336 (7%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
+ T + + +V + + +Y++LK Q + ++ + YQI RGL YIH+
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 148
Query: 200 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS----YICSRYYRAPELIFGAT 255
V HRD+KP NLL++ T +K+CDFG A+V + Y+ +R+YRAPE++ +
Sbjct: 149 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 256 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNY 311
YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 267
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNA 371
P PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+
Sbjct: 268 L-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 325
Query: 372 RLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRR 407
P F F EL E + LI E R
Sbjct: 326 EPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 357
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 108/315 (34%), Positives = 170/315 (53%), Gaps = 27/315 (8%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDH 129
+Y++ VG+G++G V A +GE VAIKK + R Y REL L++ M H
Sbjct: 43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAY--RELLLLKHMQH 100
Query: 130 PNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIF 188
NVI L F +S + LVM ++ + +++ S + ++ YQ+
Sbjct: 101 ENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEK------IQYLVYQML 154
Query: 189 RGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS-YICSRYYRA 247
+GL YIH+ GV HRD+KP NL V+ ++K+ DFG A+ +A ++ Y+ +R+YRA
Sbjct: 155 KGLKYIHSA-GVVHRDLKPGNLAVNE-DCELKILDFGLAR---HADAEMTGYVVTRWYRA 209
Query: 248 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 307
PE+I Y ++DIWS GC++AE+L G+ LF G++ +DQL +I+KV G P E ++ +
Sbjct: 210 PEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKL 269
Query: 308 NPNYTDF---RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 364
N PQ + ++F R P+A DL ++L+ R TA +A HPFF+
Sbjct: 270 NDKAAKSYIQSLPQTPRKDFTQLF-PRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 328
Query: 365 ELREPNARLPNGRPF 379
R+P +PF
Sbjct: 329 PFRDPEEETEAQQPF 343
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 181/336 (53%), Gaps = 26/336 (7%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
+ T + + +V + + +Y++LK Q + ++ + YQI RGL YIH+
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 142
Query: 200 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS----YICSRYYRAPELIFGAT 255
V HRD+KP NLL++ T +K+CDFG A+V + Y+ +R+YRAPE++ +
Sbjct: 143 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 201
Query: 256 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNY 311
YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 202 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 261
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNA 371
P PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+
Sbjct: 262 L-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 319
Query: 372 RLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRR 407
P F F EL E + LI E R
Sbjct: 320 EPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 351
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 112/340 (32%), Positives = 180/340 (52%), Gaps = 34/340 (10%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNR---ELQLMRLMDHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R E++++ H N+I +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
+ T + + +V + + +Y++LK Q + ++ + YQI RGL YIH+
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 146
Query: 200 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS----YICSRYYRAPELIFGAT 255
V HRD+KP NLL++ T +K+CDFG A+V + Y+ +R+YRAPE++ +
Sbjct: 147 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 205
Query: 256 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNY 311
YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 206 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 265
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHP----FFDELR 367
P PW+++F +A+DL ++L ++P R +A AHP ++D
Sbjct: 266 L-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQYYDPSD 323
Query: 368 EPNARLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRR 407
EP A P F F EL E + LI E R
Sbjct: 324 EPIAEAP--------FKFDMELDDLPKEKLKELIFEETAR 355
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/315 (34%), Positives = 169/315 (53%), Gaps = 27/315 (8%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKK--------VLQDRRYKNRELQLMRLMDH 129
+Y++ VG+G++G V A +GE VAIKK + R Y REL L++ M H
Sbjct: 25 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAY--RELLLLKHMQH 82
Query: 130 PNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIF 188
NVI L F +S + LVM ++ + ++ M + ++ YQ+
Sbjct: 83 ENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKI------MGLKFSEEKIQYLVYQML 136
Query: 189 RGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS-YICSRYYRA 247
+GL YIH+ GV HRD+KP NL V+ ++K+ DFG A+ +A ++ Y+ +R+YRA
Sbjct: 137 KGLKYIHSA-GVVHRDLKPGNLAVNE-DCELKILDFGLAR---HADAEMTGYVVTRWYRA 191
Query: 248 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 307
PE+I Y ++DIWS GC++AE+L G+ LF G++ +DQL +I+KV G P E ++ +
Sbjct: 192 PEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKL 251
Query: 308 NPNYTDF---RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 364
N PQ + ++F R P+A DL ++L+ R TA +A HPFF+
Sbjct: 252 NDKAAKSYIQSLPQTPRKDFTQLF-PRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 310
Query: 365 ELREPNARLPNGRPF 379
R+P +PF
Sbjct: 311 PFRDPEEETEAQQPF 325
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 174 bits (442), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 184/345 (53%), Gaps = 30/345 (8%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNRELQLMRLMDHPNV 132
+ + ++G G++G+V A TGE VAIKK+ + RE+++++ H N+
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
I++ F+ D F N Y+ + + + H Q + +++ + YQ R +
Sbjct: 72 ITI----FNIQRPDS-FENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVK 126
Query: 193 YIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS-----------YIC 241
+H V HRD+KP NLL++ +K+CDFG A+++ + A+ S Y+
Sbjct: 127 VLHG-SNVIHRDLKPSNLLINS-NCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVA 184
Query: 242 SRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP-T 300
+R+YRAPE++ + +Y+ ++D+WS GC+LAEL L +P+FPG + QL+ I ++GTP +
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 301 REEIRCM-NPNYTDF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 357
++RC+ +P ++ P A P K+F R+ P+ IDL R+L + P+ R TA EA
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMF-PRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 358 CAHPFFDELREPNARLPNGRPFPP-LFNFKQELAGASPELINRLI 401
HP+ +PN P G P PP F F + + + +LI
Sbjct: 304 LEHPYLQTYHDPNDE-PEGEPIPPSFFEFDHYKEALTTKDLKKLI 347
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 174 bits (442), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 180/336 (53%), Gaps = 26/336 (7%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
+ T + + +V + + +Y++LK Q + ++ + YQI RGL YIH+
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 142
Query: 200 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS----YICSRYYRAPELIFGAT 255
V HRD+KP NLL++ T +K+CDFG A+V + Y+ +R+YRAPE++ +
Sbjct: 143 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 201
Query: 256 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNY 311
YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P +E++ C+ NY
Sbjct: 202 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKARNY 261
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNA 371
P PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+
Sbjct: 262 L-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 319
Query: 372 RLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRR 407
P F F EL E + LI E R
Sbjct: 320 EPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 351
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 174 bits (442), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 181/336 (53%), Gaps = 26/336 (7%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAI+K+ + + Y R L+ ++++ H N+I +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
+ T + + +V + + +Y++LK Q + ++ + YQI RGL YIH+
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 148
Query: 200 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS----YICSRYYRAPELIFGAT 255
V HRD+KP NLL++ T +K+CDFG A+V + Y+ +R+YRAPE++ +
Sbjct: 149 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 256 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNY 311
YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 267
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNA 371
P PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+
Sbjct: 268 L-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 325
Query: 372 RLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRR 407
P F F EL E + LI E R
Sbjct: 326 EPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 357
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 174 bits (441), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 181/336 (53%), Gaps = 26/336 (7%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
+ T + + +V + + +Y++LK Q + ++ + YQI RGL YIH+
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLK-----CQHLSNDHICYFLYQILRGLKYIHSA-N 148
Query: 200 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS----YICSRYYRAPELIFGAT 255
V HRD+KP NLL++ T +K+CDFG A+V + Y+ +R+YRAPE++ +
Sbjct: 149 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 256 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNY 311
YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 267
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNA 371
P PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+
Sbjct: 268 L-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 325
Query: 372 RLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRR 407
P F F EL E + LI E R
Sbjct: 326 EPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 357
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 174 bits (441), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 181/336 (53%), Gaps = 26/336 (7%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
+ T + + +V + + +Y++LK Q + ++ + YQI RGL YIH+
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 148
Query: 200 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISY----ICSRYYRAPELIFGAT 255
V HRD+KP NLL++ T +K+CDFG A+V + + + +R+YRAPE++ +
Sbjct: 149 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSK 207
Query: 256 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNY 311
YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 267
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNA 371
P PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+
Sbjct: 268 L-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 325
Query: 372 RLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRR 407
P F F EL E + LI E R
Sbjct: 326 EPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 357
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 174 bits (441), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 181/336 (53%), Gaps = 26/336 (7%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
+ T + + +V + + +Y++LK Q + ++ + YQI RGL YIH+
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 149
Query: 200 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISY----ICSRYYRAPELIFGAT 255
V HRD+KP NLL++ T +K+CDFG A+V + + + +R+YRAPE++ +
Sbjct: 150 VLHRDLKPSNLLLNT-TCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSK 208
Query: 256 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM----NPNY 311
YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E++ C+ NY
Sbjct: 209 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNY 268
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNA 371
P PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+
Sbjct: 269 L-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 326
Query: 372 RLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRR 407
P F F EL E + LI E R
Sbjct: 327 EPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 358
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 184/345 (53%), Gaps = 30/345 (8%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNRELQLMRLMDHPNV 132
+ + ++G G++G+V A TGE VAIKK+ + RE+++++ H N+
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
I++ F+ D F N Y+ + + + H Q + +++ + YQ R +
Sbjct: 72 ITI----FNIQRPDS-FENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVK 126
Query: 193 YIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEAN-----------ISYIC 241
+H V HRD+KP NLL++ +K+CDFG A+++ + A+ + ++
Sbjct: 127 VLHG-SNVIHRDLKPSNLLINS-NCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVA 184
Query: 242 SRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP-T 300
+R+YRAPE++ + +Y+ ++D+WS GC+LAEL L +P+FPG + QL+ I ++GTP +
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 301 REEIRCM-NPNYTDF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 357
++RC+ +P ++ P A P K+F R+ P+ IDL R+L + P+ R TA EA
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMF-PRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 358 CAHPFFDELREPNARLPNGRPFPP-LFNFKQELAGASPELINRLI 401
HP+ +PN P G P PP F F + + + +LI
Sbjct: 304 LEHPYLQTYHDPNDE-PEGEPIPPSFFEFDHYKEALTTKDLKKLI 347
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/315 (33%), Positives = 176/315 (55%), Gaps = 28/315 (8%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------REL 121
G G P+ ++ +G G++G+V++A+ TGE VA+KK+ D + RE+
Sbjct: 1 GPLGSPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI 60
Query: 122 QLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVK 181
L++ ++HPN++ L + L LV E++ + + + + +S +PL +K
Sbjct: 61 SLLKELNHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIK 113
Query: 182 LYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYI 240
Y +Q+ +GLA+ H+ V HRD+KPQNLL++ +KL DFG A+ V +
Sbjct: 114 SYLFQLLQGLAFCHS-HRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEV 171
Query: 241 CSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 300
+ +YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP
Sbjct: 172 VTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 231
Query: 301 REEIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTA 354
E + + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 232 -EVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 285
Query: 355 LEACAHPFFDELREP 369
A AHPFF ++ +P
Sbjct: 286 KAALAHPFFQDVTKP 300
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 179/336 (53%), Gaps = 26/336 (7%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
+ T + + +V + + +Y++LK Q + ++ + YQI RGL YIH+
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 144
Query: 200 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI----SYICSRYYRAPELIFGAT 255
V HRD+KP NLL++ T +K+CDFG A+V + Y+ +R+YRAPE++ +
Sbjct: 145 VLHRDLKPSNLLLNT-TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 256 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE----IRCMNPNY 311
YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E+ I NY
Sbjct: 204 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNY 263
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNA 371
P PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+
Sbjct: 264 L-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 321
Query: 372 RLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRR 407
P F F EL E + LI E R
Sbjct: 322 EPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 353
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/315 (33%), Positives = 176/315 (55%), Gaps = 28/315 (8%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------REL 121
G G P+ ++ +G G++G+V++A+ TGE VA+KK+ D + RE+
Sbjct: 1 GPLGSPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI 60
Query: 122 QLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVK 181
L++ ++HPN++ L + L LV E++ + + + + +S +PL +K
Sbjct: 61 SLLKELNHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIK 113
Query: 182 LYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYI 240
Y +Q+ +GLA+ H+ V HRD+KPQNLL++ +KL DFG A+ V +
Sbjct: 114 SYLFQLLQGLAFCHS-HRVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEV 171
Query: 241 CSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 300
+ +YRAPE++ G Y+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP
Sbjct: 172 VTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 231
Query: 301 REEIRCMNPNYTDFR--FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTA 354
E + + D++ FP+ W + F K +PP + L S++L Y P+ R +A
Sbjct: 232 -EVVWPGVTSMPDYKPSFPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 285
Query: 355 LEACAHPFFDELREP 369
A AHPFF ++ +P
Sbjct: 286 KAALAHPFFQDVTKP 300
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/307 (34%), Positives = 173/307 (56%), Gaps = 28/307 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 75 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 126
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 127 RVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 185
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 186 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 244
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNA 371
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 245 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVP 299
Query: 372 RLPNGRP 378
L RP
Sbjct: 300 HLRLERP 306
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 170/298 (57%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E+V + + + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 74 IHTENK-----LYLVFEHVDQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 125
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 126 RVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 243
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 244 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 183/345 (53%), Gaps = 30/345 (8%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNRELQLMRLMDHPNV 132
+ + ++G G++G+V A TGE VAIKK+ + RE+++++ H N+
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENI 71
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
I++ F+ D F N Y+ + + + H Q + +++ + YQ R +
Sbjct: 72 ITI----FNIQRPDS-FENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVK 126
Query: 193 YIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS-----------YIC 241
+H V HRD+KP NLL++ +K+CDFG A+++ + A+ S +
Sbjct: 127 VLHG-SNVIHRDLKPSNLLINS-NCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVA 184
Query: 242 SRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP-T 300
+R+YRAPE++ + +Y+ ++D+WS GC+LAEL L +P+FPG + QL+ I ++GTP +
Sbjct: 185 TRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244
Query: 301 REEIRCM-NPNYTDF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 357
++RC+ +P ++ P A P K+F R+ P+ IDL R+L + P+ R TA EA
Sbjct: 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMF-PRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 358 CAHPFFDELREPNARLPNGRPFPP-LFNFKQELAGASPELINRLI 401
HP+ +PN P G P PP F F + + + +LI
Sbjct: 304 LEHPYLQTYHDPNDE-PEGEPIPPSFFEFDHYKEALTTKDLKKLI 347
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 171 bits (433), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 170/298 (57%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 71 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 122
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 123 RVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYY 181
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 240
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 241 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 171 bits (432), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 170/298 (57%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 72 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 123
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 124 RVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 182
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 241
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 242 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 171 bits (432), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 170/298 (57%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 71 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 122
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 123 RVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 240
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 241 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 171 bits (432), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 170/298 (57%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 74 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 125
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 126 RVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 243
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 244 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 170/298 (57%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 72 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 123
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 124 RVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 241
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 242 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 170/298 (57%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 75 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 126
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 127 RVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 185
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 186 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 244
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 245 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 297
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 170/298 (57%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 71 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 122
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 123 RVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 240
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 241 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 170/298 (57%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 72 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 123
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 124 RVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 241
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 242 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 170/298 (57%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 73 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 124
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 125 RVLHRDLKPQNLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 242
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 243 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 170/298 (57%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 71 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 122
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 123 RVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 240
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 241 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 170/298 (57%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 71 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 122
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 123 RVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 240
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 241 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 170/298 (57%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 70 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 121
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 122 RVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 239
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 240 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 170/298 (57%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 74 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 125
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 126 RVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 243
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 244 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 170/298 (57%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 73 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 124
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 125 RVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 242
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 243 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 170/298 (57%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 70 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 121
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 122 RVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 239
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 240 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 170/298 (57%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 70 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 121
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 122 RVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 180
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 239
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 240 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 170/298 (57%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 71 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 122
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 123 RVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 240
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 241 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 170/298 (57%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 70 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 121
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 122 RVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 180
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 239
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 240 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 169/298 (56%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E+V + + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 70 IHTENK-----LYLVFEHVHQDLKTFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 121
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 122 RVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 239
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 240 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 172/319 (53%), Gaps = 24/319 (7%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKK------VLQDRRYKNRELQLMRLMDHPNVISLKHC 138
+G G++G+V A+ TG+ VAIKK V+ + + REL++++ H N+I++K
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 139 FFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV 197
T E + +V++ + +++++ +Q + L +V+ + YQ+ RGL Y+H+
Sbjct: 122 LRPTVPYGEFKSVYVVLDLMESDLHQIIHS----SQPLTLEHVRYFLYQLLRGLKYMHSA 177
Query: 198 PGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEAN-----ISYICSRYYRAPELIF 252
V HRD+KP NLLV+ ++K+ DFG A+ L A Y+ +R+YRAPEL+
Sbjct: 178 -QVIHRDLKPSNLLVNE-NCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELML 235
Query: 253 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 312
EYT +ID+WS GC+ E+L + LFPG+N V QL I+ VLGTP+ I+ +
Sbjct: 236 SLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERV 295
Query: 313 DF---RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
P + PW V+ +A+ L R+L++ PS R +A A HPF + +P
Sbjct: 296 RAYIQSLPPRQPVPWETVY-PGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDP 354
Query: 370 NARLPNGRPFPPLFNFKQE 388
+ PF F F +E
Sbjct: 355 DDEPDCAPPFD--FAFDRE 371
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/297 (34%), Positives = 163/297 (54%), Gaps = 21/297 (7%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNV 132
Y VG G++G+V++AK G VA+K++ D + RE+ L++ + HPN+
Sbjct: 23 YQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
+SL S E L LV E++ + + +VL + Q +K+Y YQ+ RG+A
Sbjct: 82 VSLIDVIHS-----ERCLTLVFEFMEKDLKKVLDENKTGLQDSQ---IKIYLYQLLRGVA 133
Query: 193 YIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELI 251
+ H + HRD+KPQNLL++ +KL DFG A+ + + + + +YRAP+++
Sbjct: 134 HCHQ-HRILHRDLKPQNLLINS-DGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVL 191
Query: 252 FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN--P 309
G+ +Y+TS+DIWS GC+ AE++ G+PLFPG DQL +I +LGTP E + P
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELP 251
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 366
+ F + PW + E IDL S +L + P+ R +A +A HP+F +L
Sbjct: 252 LWKQRTFQVFEKKPWSSII-PGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL 307
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/297 (34%), Positives = 163/297 (54%), Gaps = 21/297 (7%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNV 132
Y VG G++G+V++AK G VA+K++ D + RE+ L++ + HPN+
Sbjct: 23 YQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNI 81
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
+SL S E L LV E++ + + +VL + Q +K+Y YQ+ RG+A
Sbjct: 82 VSLIDVIHS-----ERCLTLVFEFMEKDLKKVLDENKTGLQDSQ---IKIYLYQLLRGVA 133
Query: 193 YIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELI 251
+ H + HRD+KPQNLL++ +KL DFG A+ + + + + +YRAP+++
Sbjct: 134 HCHQ-HRILHRDLKPQNLLINS-DGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVL 191
Query: 252 FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN--P 309
G+ +Y+TS+DIWS GC+ AE++ G+PLFPG DQL +I +LGTP E + P
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELP 251
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 366
+ F + PW + E IDL S +L + P+ R +A +A HP+F +L
Sbjct: 252 LWKQRTFQVFEKKPWSSII-PGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL 307
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 178/336 (52%), Gaps = 26/336 (7%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV--LQDRRYKNRELQLMRLM---DHPNVISLKHCF 139
+G G++G+V A VAIKK+ + + Y R L+ ++++ H N+I +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
+ T + + +V + + +Y++LK Q + ++ + YQI RGL YIH+
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLK-----TQHLSNDHICYFLYQILRGLKYIHSA-N 144
Query: 200 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI----SYICSRYYRAPELIFGAT 255
V HRD+KP NLL++ T +K+ DFG A+V + Y+ +R+YRAPE++ +
Sbjct: 145 VLHRDLKPSNLLLNT-TXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 203
Query: 256 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE----IRCMNPNY 311
YT SIDIWS GC+LAE+L +P+FPG++ +DQL I+ +LG+P++E+ I NY
Sbjct: 204 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKARNY 263
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNA 371
P PW+++F +A+DL ++L ++P R +A AHP+ ++ +P+
Sbjct: 264 L-LSLPHKNKVPWNRLF-PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 321
Query: 372 RLPNGRPFPPLFNFKQELAGASPELINRLIPEHVRR 407
P F F EL E + LI E R
Sbjct: 322 EPIAEAP----FKFDMELDDLPKEKLKELIFEETAR 353
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 170/298 (57%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + + + +S +PL +K Y +Q+ +GL++ H+
Sbjct: 71 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLSFCHS-H 122
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 123 RVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 240
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 241 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/320 (33%), Positives = 172/320 (53%), Gaps = 24/320 (7%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKK------VLQDRRYKNRELQLMRLMDHPNVISLKH 137
+G G++G+V A+ TG+ VAIKK V+ + + REL++++ H N+I++K
Sbjct: 62 TIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKD 121
Query: 138 CFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHT 196
T E + +V++ + +++++ +Q + L +V+ + YQ+ RGL Y+H+
Sbjct: 122 ILRPTVPYGEFKSVYVVLDLMESDLHQIIHS----SQPLTLEHVRYFLYQLLRGLKYMHS 177
Query: 197 VPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEAN-----ISYICSRYYRAPELI 251
V HRD+KP NLLV+ ++K+ DFG A+ L A Y+ +R+YRAPEL+
Sbjct: 178 A-QVIHRDLKPSNLLVNE-NCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM 235
Query: 252 FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 311
EYT +ID+WS GC+ E+L + LFPG+N V QL I+ VLGTP+ I+ +
Sbjct: 236 LSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAER 295
Query: 312 TDF---RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 368
P + PW V+ +A+ L R+L++ PS R +A A HPF + +
Sbjct: 296 VRAYIQSLPPRQPVPWETVY-PGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHD 354
Query: 369 PNARLPNGRPFPPLFNFKQE 388
P+ PF F F +E
Sbjct: 355 PDDEPDCAPPFD--FAFDRE 372
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 170/298 (57%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 72 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 123
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KP+NLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 124 RVLHRDLKPENLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 241
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 242 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 169/298 (56%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 74 IHTENK-----LYLVFEFLHQDLKTFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 125
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 126 RVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 243
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 244 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 170/298 (57%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 73 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 124
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KP+NLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 125 RVLHRDLKPENLLIN-TEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 242
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 243 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 169/298 (56%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 72 IHTENK-----LYLVFEFLSMDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 123
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KP+NLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 124 RVLHRDLKPENLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 241
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 242 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 169/298 (56%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+ K+ D + RE+ L++ ++HPN++ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 71 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 122
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 123 RVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 240
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 241 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 169/298 (56%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+ K+ D + RE+ L++ ++HPN++ L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 70 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 121
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 122 RVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 239
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 240 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 168/298 (56%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 74 IHTENK-----LYLVFEFLSMDLKDFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 125
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 126 RVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 243
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 244 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 168/298 (56%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 73 IHTENK-----LYLVFEFLSMDLKDFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 124
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 125 RVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 242
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 243 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 169/298 (56%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 74 IHTENK-----LYLVFEFLSMDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 125
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KP+NLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 126 RVLHRDLKPENLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 243
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 244 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 167 bits (424), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 169/298 (56%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 71 IHTENK-----LYLVFEFLHQDLKDFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 122
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KP+NLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 123 RVLHRDLKPENLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 240
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF ++ +P
Sbjct: 241 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 167 bits (424), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 167/294 (56%), Gaps = 28/294 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ TGE VA+KK+ D + RE+ L++ ++HPN++ L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + + + +S +PL +K Y +Q+ +GLA+ H+
Sbjct: 71 IHTENK-----LYLVFEFLHQDLKKFMD--ASALTGIPLPLIKSYLFQLLQGLAFCHS-H 122
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ +KL DFG A+ V + + +YRAPE++ G Y
Sbjct: 123 RVLHRDLKPQNLLINT-EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR-- 315
+T++DIWS GC+ AE++ + LFPG++ +DQL I + LGTP E + + D++
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSMPDYKPS 240
Query: 316 FPQIKAHPWHKV-FHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFFDE 365
FP+ W + F K +PP + L S++L Y P+ R +A A AHPFF +
Sbjct: 241 FPK-----WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/289 (33%), Positives = 159/289 (55%), Gaps = 19/289 (6%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRLMDHPNVISLKH 137
+VG GS+G+V + + +TG VAIKK L+ ++ RE++L++ + H N+++L
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNL-- 89
Query: 138 CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV 197
K + LV E+V T+ L+ + + + V+ Y +QI G+ + H+
Sbjct: 90 ---LEVCKKKKRWYLVFEFVDHTILDDLELFPN---GLDYQVVQKYLFQIINGIGFCHS- 142
Query: 198 PGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK-GEANISYICSRYYRAPELIFGATE 256
+ HRD+KP+N+LV + VKLCDFG A+ L GE + +R+YRAPEL+ G +
Sbjct: 143 HNIIHRDIKPENILVSQ-SGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVK 201
Query: 257 YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT--PTREEIRCMNPNYTDF 314
Y ++D+W+ GC++ E+ +G+PLFPG++ +DQL I+ LG P +E+ NP +
Sbjct: 202 YGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGV 261
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
R P+IK + + ++ IDLA + L P R E H FF
Sbjct: 262 RLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFF 310
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/333 (33%), Positives = 177/333 (53%), Gaps = 30/333 (9%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V + +++G +A+KK ++ +R R
Sbjct: 41 ELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKR-TYR 99
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F TS +E + LV + + ++K Q++
Sbjct: 100 ELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 154
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 155 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 210
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + ++QL +I+++ GT
Sbjct: 211 YVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGT 270
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P I M NY + PQ+ + VF P A+DL ++L R TA
Sbjct: 271 PPASVISRMPSHEARNYIN-SLPQMPKRNFADVF-IGANPLAVDLLEKMLVLDTDKRITA 328
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQ 387
EA AHP+F + +P+ P P+ F +Q
Sbjct: 329 SEALAHPYFSQYHDPDDE-PESEPYDQSFESRQ 360
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 167/319 (52%), Gaps = 31/319 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN---------RELQLMRLMDHPNVISL 135
+G G F V++A+ T + VAIKK+ R + RE++L++ + HPN+I L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
F ++ ++LV +++ + ++K S + + ++K Y +GL Y+H
Sbjct: 78 LDAFGHKSN-----ISLVFDFMETDLEVIIKDNSLV---LTPSHIKAYMLMTLQGLEYLH 129
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISY---ICSRYYRAPELIF 252
+ HRD+KP NLL+D +KL DFG AK G N +Y + +R+YRAPEL+F
Sbjct: 130 Q-HWILHRDLKPNNLLLDE-NGVLKLADFGLAKSF--GSPNRAYXHQVVTRWYRAPELLF 185
Query: 253 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI--RCMNPN 310
GA Y +D+W+ GC+LAELLL P PG++ +DQL I + LGTPT E+ C P+
Sbjct: 186 GARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPD 245
Query: 311 YTDFR-FPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
Y F+ FP I P H +F + +DL L ++P R TA +A +F P
Sbjct: 246 YVTFKSFPGI---PLHHIFSA-AGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGP 301
Query: 370 NARLPNGRPFPPLFNFKQE 388
RP P+ K++
Sbjct: 302 TPGCQLPRPNCPVETLKEQ 320
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 164 bits (416), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 162/306 (52%), Gaps = 19/306 (6%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPNVISLK 136
R VG+G++G V A + VA+KK+ L R REL+L++ + H NVI L
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 137 HCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
F TS ++ + LV + + ++K +Q + +V+ YQ+ RGL YIH
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVK-----SQALSDEHVQFLVYQLLRGLKYIH 148
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
+ G+ HRD+KP N+ V+ ++++ DFG A+ E Y+ +R+YRAPE++
Sbjct: 149 SA-GIIHRDLKPSNVAVNE-DSELRILDFGLARQ--ADEEMTGYVATRWYRAPEIMLNWM 204
Query: 256 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR 315
Y ++DIWS GC++AELL G+ LFPG + +DQL I++V+GTP+ E + ++ +
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTY 264
Query: 316 FPQIKAHPWHKV--FHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARL 373
+ P + + P AIDL R+L R +A EA AH +F + +P
Sbjct: 265 IQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDE- 323
Query: 374 PNGRPF 379
P P+
Sbjct: 324 PEAEPY 329
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 161/306 (52%), Gaps = 19/306 (6%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPNVISLK 136
R VG+G++G V A + VA+KK+ L R REL+L++ + H NVI L
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 137 HCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
F TS ++ + LV + + ++K Q + +V+ YQ+ RGL YIH
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVK-----CQALSDEHVQFLVYQLLRGLKYIH 148
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
+ G+ HRD+KP N+ V+ ++++ DFG A+ E Y+ +R+YRAPE++
Sbjct: 149 SA-GIIHRDLKPSNVAVNE-DSELRILDFGLARQ--ADEEMTGYVATRWYRAPEIMLNWM 204
Query: 256 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR 315
Y ++DIWS GC++AELL G+ LFPG + +DQL I++V+GTP+ E + ++ +
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTY 264
Query: 316 FPQIKAHPWHKV--FHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARL 373
+ P + + P AIDL R+L R +A EA AH +F + +P
Sbjct: 265 IQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDE- 323
Query: 374 PNGRPF 379
P P+
Sbjct: 324 PEAEPY 329
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 163/298 (54%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQ--------DRRYKNRELQLMRLMDHPNVISLK 136
VG+G++G V A TG VAIKK+ + R Y REL+L++ M H NVI L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAY--RELRLLKHMRHENVIGLL 90
Query: 137 HCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
F + D+ LVM ++ + +++KH R ++ YQ+ +GL YIH
Sbjct: 91 DVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDR-----IQFLVYQMLKGLRYIH 145
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI-SYICSRYYRAPELIFGA 254
G+ HRD+KP NL V+ ++K+ DFG A+ + ++ + + +R+YRAPE+I
Sbjct: 146 AA-GIIHRDLKPGNLAVNE-DCELKILDFGLAR---QADSEMXGXVVTRWYRAPEVILNW 200
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP----N 310
YT ++DIWS GC++AE++ G+ LF G + +DQL EI+KV GTP E ++ + N
Sbjct: 201 MRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKN 260
Query: 311 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 368
Y P+++ + + P A++L ++L R TA EA AHP+F+ L +
Sbjct: 261 YMK-GLPELEKKDFASIL-TNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHD 316
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 160/299 (53%), Gaps = 30/299 (10%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G VF+AK ET E VA+K+V D + RE+ L++ + H N++ L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
S L LV E+ + + K++ S N + VK + +Q+ +GL + H+
Sbjct: 70 LHSDKK-----LTLVFEFCDQDLK---KYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR- 120
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ ++KL +FG A+ + + + + +YR P+++FGA Y
Sbjct: 121 NVLHRDLKPQNLLIN-RNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 179
Query: 258 TTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRF 316
+TSID+WSAGC+ AEL G+PLFPG + DQL I ++LGTPT E+ M +
Sbjct: 180 STSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT------KL 233
Query: 317 PQIKAHPWHKVFHK------RMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
P K +P + ++ DL LL+ +P R +A EA HP+F + P
Sbjct: 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 159/299 (53%), Gaps = 30/299 (10%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G VF+AK ET E VA+K+V D + RE+ L++ + H N++ L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
S L LV E+ + + K++ S N + VK + +Q+ +GL + H+
Sbjct: 70 LHSDKK-----LTLVFEFCDQDLK---KYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR- 120
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ ++KL DFG A+ + + + + +YR P+++FGA Y
Sbjct: 121 NVLHRDLKPQNLLIN-RNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 179
Query: 258 TTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRF 316
+TSID+WSAGC+ AEL +PLFPG + DQL I ++LGTPT E+ M +
Sbjct: 180 STSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMT------KL 233
Query: 317 PQIKAHPWHKVFHK------RMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
P K +P + ++ DL LL+ +P R +A EA HP+F + P
Sbjct: 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 161/306 (52%), Gaps = 19/306 (6%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPNVISLK 136
R VG+G++G V A + VA+KK+ L R REL+L++ + H NVI L
Sbjct: 26 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 137 HCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
F TS ++ + LV + + ++K Q + +V+ YQ+ RGL YIH
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVK-----CQALSDEHVQFLVYQLLRGLKYIH 140
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
+ G+ HRD+KP N+ V+ ++++ DFG A+ E Y+ +R+YRAPE++
Sbjct: 141 SA-GIIHRDLKPSNVAVNE-DCELRILDFGLARQ--ADEEMTGYVATRWYRAPEIMLNWM 196
Query: 256 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFR 315
Y ++DIWS GC++AELL G+ LFPG + +DQL I++V+GTP+ E + ++ +
Sbjct: 197 HYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTY 256
Query: 316 FPQIKAHPWHKV--FHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARL 373
+ P + + P AIDL R+L R +A EA AH +F + +P
Sbjct: 257 IQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDE- 315
Query: 374 PNGRPF 379
P P+
Sbjct: 316 PEAEPY 321
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 173/339 (51%), Gaps = 57/339 (16%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ------DRRYKNRELQLM-RLMDHPN 131
Y + +G G++GIV+++ TGE VA+KK+ D + RE+ ++ L H N
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 132 VISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGL 191
+++L + + +D + LV +Y+ ++ V++ N P ++ + YQ+ + +
Sbjct: 71 IVNLLNVLRADNDRD---VYLVFDYMETDLHAVIR----ANILEP-VHKQYVVYQLIKVI 122
Query: 192 AYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV---KGEANI----------- 237
Y+H+ G+ HRD+KP N+L++ H VK+ DFG ++ V + NI
Sbjct: 123 KYLHS-GGLLHRDMKPSNILLNAECH-VKVADFGLSRSFVNIRRVTNNIPLSINENTENF 180
Query: 238 --------SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQL 289
Y+ +R+YRAPE++ G+T+YT ID+WS GC+L E+L G+P+FPG + ++QL
Sbjct: 181 DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL 240
Query: 290 VEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAH-------------PWHKVFHKRMPP-- 334
II V+ P+ E++ + + +K W + K P
Sbjct: 241 ERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKAD 300
Query: 335 ---EAIDLASRLLQYSPSLRCTALEACAHPFFDELREPN 370
EA+DL +LLQ++P+ R +A +A HPF PN
Sbjct: 301 CNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPN 339
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/307 (31%), Positives = 168/307 (54%), Gaps = 21/307 (6%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----RELQLMRLMDHPNV 132
+Y+ +G G++ V++ K T VA+K++ + RE+ L++ + H N+
Sbjct: 3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI 62
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
++L + S L LV EY+ + + + L ++ + + VKL+ +Q+ RGLA
Sbjct: 63 VTLHDIIHTEKS-----LTLVFEYLDKDLKQYLDDCGNI---INMHNVKLFLFQLLRGLA 114
Query: 193 YIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELI 251
Y H V HRD+KPQNLL++ ++KL DFG A+ + + + + + +YR P+++
Sbjct: 115 YCHR-QKVLHRDLKPQNLLINE-RGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDIL 172
Query: 252 FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM--NP 309
G+T+Y+T ID+W GC+ E+ G+PLFPG +QL I ++LGTPT E + N
Sbjct: 173 LGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNE 232
Query: 310 NYTDFRFPQIKAHPWHKVFHK-RMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 368
+ + +P+ +A + H R+ + DL ++LLQ+ R +A +A HPFF L E
Sbjct: 233 EFKTYNYPKYRAEAL--LSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGE 290
Query: 369 PNARLPN 375
+LP+
Sbjct: 291 RIHKLPD 297
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/335 (33%), Positives = 176/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 125
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 126 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 181
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ A Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 182 YVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 242 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 299
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 300 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----XQKLTDD 125
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 126 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DXELKILDFGLARH--TDDEMTG 181
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 242 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 299
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 300 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 18 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYR 76
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 131
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 132 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTG 187
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 247
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 248 PGAELLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITA 305
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 306 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 339
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 18 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 76
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 131
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 132 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DSELKILDFGLARH--TDDEMTG 187
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 247
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 248 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITA 305
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 306 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 339
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 31 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYR 89
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 144
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 145 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 200
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 201 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 260
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 261 PGAELLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITA 318
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 319 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 352
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 8 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYR 66
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 121
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 122 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 177
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 178 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 237
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 238 PGAELLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITA 295
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 296 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 329
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 32 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYR 90
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 145
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 146 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 201
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 202 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 261
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 262 PGAELLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITA 319
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 320 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 353
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 14 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 72
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 127
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 128 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DSELKILDFGLARH--TDDEMTG 183
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 243
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 244 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 301
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 302 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 335
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 22 ELNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYR 80
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 81 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 135
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 136 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 191
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 192 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 251
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 252 PGAELLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITA 309
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 310 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 343
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 23 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 81
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 136
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 137 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DXELKILDFGLARH--TDDEMTG 192
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 193 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 252
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 253 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 310
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 311 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 344
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 112/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 125
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 126 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 181
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 242 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 299
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P PF F + L
Sbjct: 300 AQALAHAYFAQYHDPDDE-PVADPFDQSFESRDLL 333
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 125
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 126 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 181
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 242 PGAELLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITA 299
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 300 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 158 bits (400), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 17 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 75
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 130
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 131 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DXELKILDFGLARH--TDDEMTG 186
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 246
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 247 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 304
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 305 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 338
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----XQKLTDD 125
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 126 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 181
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 242 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 299
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 300 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 158 bits (399), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 162/294 (55%), Gaps = 30/294 (10%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ GET A+KK+ ++ + RE+ +++ + H N++ L
Sbjct: 10 IGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + ++L + + K + Q+ G+AY H
Sbjct: 69 IHTKKR-----LVLVFEHLDQDLKKLL---DVCEGGLESVTAKSFLLQLLNGIAYCHD-R 119
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ ++K+ DFG A+ + I + +YRAP+++ G+ +Y
Sbjct: 120 RVLHRDLKPQNLLINR-EGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKY 178
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE------EIRCMNPNY 311
+T+IDIWS GC+ AE++ G PLFPG + DQL+ I ++LGTP + E+ +PN+
Sbjct: 179 STTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 365
T + + PW F K + IDL S++L+ P+ R TA +A H +F E
Sbjct: 239 TVY-----EPLPWES-FLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 157 bits (398), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER +G+G++G V A +TG VA+KK ++ +R R
Sbjct: 17 ELNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 75
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 130
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 131 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DXELKILDFGLARH--TDDEMTG 186
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 246
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 247 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 304
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 305 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 338
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 19 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 77
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 132
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 133 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TADEMTG 188
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 248
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 249 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 306
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 307 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 340
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 112/336 (33%), Positives = 175/336 (52%), Gaps = 32/336 (9%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKKVLQ--------DRRYKN 118
E +TI + ER VG+G++G V A +TG VA+KK+ + R Y
Sbjct: 24 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTY-- 81
Query: 119 RELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPL 177
REL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTD 136
Query: 178 IYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI 237
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 137 DHVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMT 192
Query: 238 SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG 297
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++G
Sbjct: 193 GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 252
Query: 298 TPTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 353
TP E ++ ++ NY Q+ + VF P A+DL ++L R T
Sbjct: 253 TPGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRIT 310
Query: 354 ALEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
A +A AH +F + +P+ P P+ F + L
Sbjct: 311 AAQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 345
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 18 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 76
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 131
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 132 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNEDC-ELKILDFGLARH--TDDEMTG 187
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 247
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 248 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITA 305
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 306 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 339
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 35 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 93
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 148
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 149 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 204
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 205 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 264
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 265 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITA 322
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 323 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 356
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 14 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 72
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 127
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 128 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 183
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 243
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 244 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITA 301
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 302 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 335
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 125
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 126 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 181
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 242 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 299
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 300 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 157 bits (398), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 14 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 72
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 127
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 128 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 183
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 243
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 244 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 301
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 302 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 335
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 157 bits (397), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 17 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 75
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 130
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 131 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 186
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 246
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 247 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITA 304
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 305 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 338
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 157 bits (397), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 24 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 82
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 137
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 138 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 193
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 194 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 253
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 254 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 311
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 312 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 345
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 157 bits (397), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 23 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 81
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 136
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 137 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 192
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 193 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 252
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 253 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 310
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 311 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 344
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 157 bits (397), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 19 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 77
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 132
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 133 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 188
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 248
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 249 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 306
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 307 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 340
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 157 bits (397), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 24 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 82
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 137
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 138 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 193
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 194 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 253
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 254 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 311
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 312 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 345
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 157 bits (397), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 17 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 75
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 130
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 131 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 186
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 246
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 247 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 304
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 305 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 338
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 157 bits (397), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 11 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 69
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 70 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 124
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 125 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 180
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 181 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 240
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 241 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 298
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 299 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 332
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 18 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 76
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 131
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 132 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 187
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 247
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 248 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITA 305
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 306 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 339
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 31 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 89
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 144
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 145 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 200
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 201 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 260
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 261 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 318
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 319 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 352
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 172/325 (52%), Gaps = 30/325 (9%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K +Q++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----SQKLTDD 125
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG + +
Sbjct: 126 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DSELKILDFGLCRH--TDDEMTG 181
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 242 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 299
Query: 355 LEACAHPFFDELREPNARLPNGRPF 379
+A AH +F + +P+ P P+
Sbjct: 300 AQALAHAYFAQYHDPDDE-PVADPY 323
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 162/294 (55%), Gaps = 30/294 (10%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ GET A+KK+ ++ + RE+ +++ + H N++ L
Sbjct: 10 IGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + ++L + + K + Q+ G+AY H
Sbjct: 69 IHTKKR-----LVLVFEHLDQDLKKLL---DVCEGGLESVTAKSFLLQLLNGIAYCHD-R 119
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ ++K+ DFG A+ + + + +YRAP+++ G+ +Y
Sbjct: 120 RVLHRDLKPQNLLINR-EGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKY 178
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE------EIRCMNPNY 311
+T+IDIWS GC+ AE++ G PLFPG + DQL+ I ++LGTP + E+ +PN+
Sbjct: 179 STTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 365
T + + PW F K + IDL S++L+ P+ R TA +A H +F E
Sbjct: 239 TVY-----EPLPWES-FLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 32 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 90
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 145
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 146 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 201
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 202 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 261
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 262 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 319
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 320 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 353
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 125
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 126 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 181
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 242 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 299
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 300 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 125
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 126 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 181
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 242 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 299
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 300 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 35 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 93
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 148
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 149 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMXG 204
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 205 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 264
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 265 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITA 322
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 323 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 356
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 14 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 72
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 127
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 128 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 183
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 243
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 244 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 301
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 302 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 335
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 162/294 (55%), Gaps = 30/294 (10%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G+V++A+ GET A+KK+ ++ + RE+ +++ + H N++ L
Sbjct: 10 IGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+ L LV E++ + + ++L + + K + Q+ G+AY H
Sbjct: 69 IHTKKR-----LVLVFEHLDQDLKKLL---DVCEGGLESVTAKSFLLQLLNGIAYCHD-R 119
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATEY 257
V HRD+KPQNLL++ ++K+ DFG A+ + + + +YRAP+++ G+ +Y
Sbjct: 120 RVLHRDLKPQNLLINR-EGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKY 178
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE------EIRCMNPNY 311
+T+IDIWS GC+ AE++ G PLFPG + DQL+ I ++LGTP + E+ +PN+
Sbjct: 179 STTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNF 238
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 365
T + + PW F K + IDL S++L+ P+ R TA +A H +F E
Sbjct: 239 TVY-----EPLPWES-FLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 161/293 (54%), Gaps = 19/293 (6%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKNRELQLMRLMDHPNVISLKHC 138
+G GS+G+VF+ + +TG+ VAIKK L+ ++ RE+++++ + HPN+++L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
F + + L+LV EY T+ L Y + +P VK T+Q + + + H
Sbjct: 71 F-----RRKRRLHLVFEYCDHTVLHELDRYQ---RGVPEHLVKSITWQTLQAVNFCHK-H 121
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK-GEANISYICSRYYRAPELIFGATEY 257
HRDVKP+N+L+ + +KLCDFG A++L + + +R+YR+PEL+ G T+Y
Sbjct: 122 NCIHRDVKPENILITKHS-VIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQY 180
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG--TPTREEIRCMNPNYTDFR 315
+D+W+ GCV AELL G PL+PG++ VDQL I K LG P +++ N ++ +
Sbjct: 181 GPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVK 240
Query: 316 FPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 368
P + ++ + A+ L L P+ R T + HP+F+ +RE
Sbjct: 241 IPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIRE 293
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 10 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 68
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 69 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 123
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 124 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 179
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 180 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 239
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 240 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 297
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 298 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 331
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 8 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 66
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 121
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 122 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 177
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 178 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 237
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 238 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 295
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 296 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 329
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 9 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 67
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 122
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 123 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 178
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 179 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 238
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 239 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 296
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 297 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 330
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 172/325 (52%), Gaps = 30/325 (9%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 19 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 77
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 132
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 133 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TADEMTG 188
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 248
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 249 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 306
Query: 355 LEACAHPFFDELREPNARLPNGRPF 379
+A AH +F + +P+ P P+
Sbjct: 307 AQALAHAYFAQYHDPDDE-PVADPY 330
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/335 (33%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 9 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 67
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 122
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 123 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 178
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 179 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 238
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 239 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 296
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 297 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 330
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 172/325 (52%), Gaps = 30/325 (9%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 19 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 77
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 132
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 133 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TADEMTG 188
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 248
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 249 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 306
Query: 355 LEACAHPFFDELREPNARLPNGRPF 379
+A AH +F + +P+ P P+
Sbjct: 307 AQALAHAYFAQYHDPDDE-PVADPY 330
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 125
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 126 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMAG 181
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
++ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 182 FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 242 PGAELLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITA 299
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 300 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 8 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYR 66
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 121
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 122 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMAG 177
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
++ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 178 FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 237
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 238 PGAELLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITA 295
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 296 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 329
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 125
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 126 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMAG 181
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
++ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 182 FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 242 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITA 299
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 300 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/316 (33%), Positives = 169/316 (53%), Gaps = 29/316 (9%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 125
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 126 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 181
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 242 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 299
Query: 355 LEACAHPFFDELREPN 370
+A AH +F + +P+
Sbjct: 300 AQALAHAYFAQYHDPD 315
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/316 (33%), Positives = 169/316 (53%), Gaps = 29/316 (9%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 125
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 126 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 181
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 242 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 299
Query: 355 LEACAHPFFDELREPN 370
+A AH +F + +P+
Sbjct: 300 AQALAHAYFAQYHDPD 315
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/316 (33%), Positives = 169/316 (53%), Gaps = 29/316 (9%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 125
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 126 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 181
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 242 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 299
Query: 355 LEACAHPFFDELREPN 370
+A AH +F + +P+
Sbjct: 300 AQALAHAYFAQYHDPD 315
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 175/335 (52%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 125
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ D+G A+ +
Sbjct: 126 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDYGLARH--TDDEMTG 181
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 242 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 299
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 300 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 174/335 (51%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 8 ELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYR 66
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K ++
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CAKLTDD 121
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 122 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 177
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 178 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 237
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 238 PGAELLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITA 295
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 296 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 329
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 174/335 (51%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 32 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYR 90
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 145
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 146 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMXG 201
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 202 XVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 261
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 262 PGAELLKKISSESARNYIQ-SLAQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITA 319
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 320 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 353
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 154 bits (390), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 174/335 (51%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 125
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DF A+ +
Sbjct: 126 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFYLARH--TDDEMTG 181
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 242 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVF-IGANPLAVDLLEKMLVLDSDKRITA 299
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 300 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 154 bits (389), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 174/335 (51%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 125
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ FG A+ +
Sbjct: 126 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILGFGLARH--TDDEMTG 181
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 242 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 299
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 300 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 154 bits (389), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 174/335 (51%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 125
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ D G A+ +
Sbjct: 126 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDAGLARH--TDDEMTG 181
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 242 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 299
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 300 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 154 bits (389), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 174/335 (51%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 125
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ DFG A+ +
Sbjct: 126 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDFGLARH--TDDEMTG 181
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 182 XVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 242 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 299
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 300 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 154 bits (389), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 174/335 (51%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 125
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ D G A+ +
Sbjct: 126 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDGGLARH--TDDEMTG 181
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 242 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 299
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 300 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 174/335 (51%), Gaps = 30/335 (8%)
Query: 72 EPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKK-------VLQDRRYKNR 119
E +TI + ER VG+G++G V A +TG VA+KK ++ +R R
Sbjct: 12 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYR 70
Query: 120 ELQLMRLMDHPNVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
EL+L++ M H NVI L F S +E + LV + + ++K Q++
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-----CQKLTDD 125
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+V+ YQI RGL YIH+ + HRD+KP NL V+ ++K+ D G A+ +
Sbjct: 126 HVQFLIYQILRGLKYIHSA-DIIHRDLKPSNLAVNE-DCELKILDRGLARH--TDDEMTG 181
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
Y+ +R+YRAPE++ Y ++DIWS GC++AELL G+ LFPG + +DQL I++++GT
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 299 PTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA 354
P E ++ ++ NY Q+ + VF P A+DL ++L R TA
Sbjct: 242 PGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIG-ANPLAVDLLEKMLVLDSDKRITA 299
Query: 355 LEACAHPFFDELREPNARLPNGRPFPPLFNFKQEL 389
+A AH +F + +P+ P P+ F + L
Sbjct: 300 AQALAHAYFAQYHDPDDE-PVADPYDQSFESRDLL 333
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 157/298 (52%), Gaps = 28/298 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----RELQLMRLMDHPNVISLKHCF 139
+G G++ V++ TG VA+K+V D RE+ LM+ + H N++ L
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMN--QRMPLIYVKLYTYQIFRGLAYIHTV 197
+ L LV E++ + + + + N + + L VK + +Q+ +GLA+ H
Sbjct: 73 HTENK-----LTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE- 126
Query: 198 PGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIFGATE 256
+ HRD+KPQNLL++ Q+KL DFG A+ + S + + +YRAP+++ G+
Sbjct: 127 NKILHRDLKPQNLLINK-RGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRT 185
Query: 257 YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN--PNYTDF 314
Y+TSIDIWS GC+LAE++ G+PLFPG N +QL I ++GTP + P Y
Sbjct: 186 YSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYN-- 243
Query: 315 RFPQIKAHP---WHKVF--HKRMPPEA--IDLASRLLQYSPSLRCTALEACAHPFFDE 365
P I+ P +V H + P + +D LLQ +P +R +A +A HP+F E
Sbjct: 244 --PNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAE 299
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 168/311 (54%), Gaps = 40/311 (12%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVL----QDRRYKNRELQLMRLMDHPNVIS 134
YM + +G G G+VF A + + VAIKK++ Q ++ RE++++R +DH N++
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 135 LKHCFFSTTSK--DELF----LN---LVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTY 185
+ + S+ D++ LN +V EY+ + VL+ + + + +L+ Y
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEE-----HARLFMY 127
Query: 186 QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV-----KGEANISYI 240
Q+ RGL YIH+ V HRD+KP NL ++ +K+ DFG A+++ KG + +
Sbjct: 128 QLLRGLKYIHSA-NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLS-EGL 185
Query: 241 CSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQL---VEIIKVLG 297
+++YR+P L+ YT +ID+W+AGC+ AE+L G+ LF G + ++Q+ +E I V+
Sbjct: 186 VTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVH 245
Query: 298 TPTREEIRCMNPNY--TDFRFPQIKAHPWHKVFHKRMPP---EAIDLASRLLQYSPSLRC 352
R+E+ + P Y D P HK + +P EA+D ++L +SP R
Sbjct: 246 EEDRQELLSVIPVYIRNDMTEP-------HKPLTQLLPGISREAVDFLEQILTFSPMDRL 298
Query: 353 TALEACAHPFF 363
TA EA +HP+
Sbjct: 299 TAEEALSHPYM 309
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 167/315 (53%), Gaps = 35/315 (11%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM++++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKL--SRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 131 NVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+I L + F S +E + +VME + + +V++ ++RM + YQ+
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELD-HERMSYL-----LYQMLV 137
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
G+ ++H+ G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE
Sbjct: 138 GIKHLHSA-GIIHRDLKPSNIVVKS-DATLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+I G Y ++DIWS GC++ E++ G LFPG + +DQ ++I+ LGTP+ E ++ + P
Sbjct: 196 VILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 310 ---NYTDFRFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSPSLRCTAL 355
Y + R P+ + + K+F +K +A DL S++L S R +
Sbjct: 255 TVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 313
Query: 356 EACAHPFFDELREPN 370
EA HP+ + +P+
Sbjct: 314 EALQHPYINVWYDPS 328
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 167/315 (53%), Gaps = 35/315 (11%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM++++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKL--SRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+I L + F S +E + +VME + + +V++ ++RM + YQ+
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELD-HERMSYL-----LYQMLC 137
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
G+ ++H+ G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE
Sbjct: 138 GIKHLHSA-GIIHRDLKPSNIVVKS-DATLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+I G Y ++DIWS GC++ E++ G LFPG + +DQ ++I+ LGTP+ E ++ + P
Sbjct: 196 VILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 310 ---NYTDFRFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSPSLRCTAL 355
Y + R P+ + + K+F +K +A DL S++L S R +
Sbjct: 255 TVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 313
Query: 356 EACAHPFFDELREPN 370
EA HP+ + +P+
Sbjct: 314 EALQHPYINVWYDPS 328
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 165/313 (52%), Gaps = 33/313 (10%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL--SRPFQNQTHAKRAYRELVLMKXVNHK 83
Query: 131 NVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+ISL + F + +E + LVME + + +V++ ++RM + YQ+
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELD-HERMSYL-----LYQMLX 137
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
G+ ++H+ G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE
Sbjct: 138 GIKHLHSA-GIIHRDLKPSNIVVKS-DXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P
Sbjct: 196 VILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 310 ---NYTDFR-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 356
NY + R FP++ P +K +A DL S++L P+ R + +
Sbjct: 255 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 314
Query: 357 ACAHPFFDELREP 369
A HP+ + +P
Sbjct: 315 ALQHPYINVWYDP 327
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 165/313 (52%), Gaps = 33/313 (10%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 131 NVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+ISL + F + +E + LVME + + +V++ ++RM + YQ+
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELD-HERMSYL-----LYQMLX 137
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
G+ ++H+ G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE
Sbjct: 138 GIKHLHSA-GIIHRDLKPSNIVVKS-DXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P
Sbjct: 196 VILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 310 ---NYTDFR-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 356
NY + R FP++ P +K +A DL S++L P+ R + +
Sbjct: 255 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 314
Query: 357 ACAHPFFDELREP 369
A HP+ + +P
Sbjct: 315 ALQHPYINVWYDP 327
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 165/313 (52%), Gaps = 33/313 (10%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 76
Query: 131 NVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+ISL + F + +E + LVME + + +V++ ++RM + YQ+
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELD-HERMSYL-----LYQMLX 130
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
G+ ++H+ G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE
Sbjct: 131 GIKHLHSA-GIIHRDLKPSNIVVKS-DXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 188
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P
Sbjct: 189 VILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 247
Query: 310 ---NYTDFR-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 356
NY + R FP++ P +K +A DL S++L P+ R + +
Sbjct: 248 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 307
Query: 357 ACAHPFFDELREP 369
A HP+ + +P
Sbjct: 308 ALQHPYINVWYDP 320
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 164/309 (53%), Gaps = 35/309 (11%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHPNVISLK 136
+G+G+ GIV A VAIKK+ R ++N REL LM++++H N+I L
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKL--SRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 137 HCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
+ F S +E + +VME + + +V++ ++RM + YQ+ G+ ++H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELD-HERMSYL-----LYQMLVGIKHLH 143
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
+ G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE+I G
Sbjct: 144 SA-GIIHRDLKPSNIVVKS-DATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 256 EYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYT 312
Y ++DIWS G ++ E++ G LFPG + +DQ ++I+ LGTP+ E ++ + P Y
Sbjct: 202 -YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYV 260
Query: 313 DFRFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSPSLRCTALEACAHP 361
+ R P+ + + K+F +K +A DL S++L S R + EA HP
Sbjct: 261 ENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319
Query: 362 FFDELREPN 370
+ + +P+
Sbjct: 320 YINVWYDPS 328
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 158/312 (50%), Gaps = 30/312 (9%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKV---LQDRRYKN------------RELQL 123
Y +R + +GS+G V A G VAIK+V + D R N RE++L
Sbjct: 24 YTVQRFISSGSYGAVC-AGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 124 MRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLI--YVK 181
+ HPN++ L+ F L LV E + + +V+ +QR+ + +++
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH-----DQRIVISPQHIQ 137
Query: 182 LYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYIC 241
+ Y I GL +H GV HRD+ P N+L+ + + +CDF A+ Y+
Sbjct: 138 YFMYHILLGLHVLHEA-GVVHRDLHPGNILLAD-NNDITICDFNLAREDTADANKTHYVT 195
Query: 242 SRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 301
R+YRAPEL+ +T +D+WSAGCV+AE+ + LF G +QL +I++V+GTP
Sbjct: 196 HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI 255
Query: 302 EEIRCM-NPNYTDF---RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 357
E++ +P+ D+ + A W V P A+DL +++L+++P R + +A
Sbjct: 256 EDVVMFSSPSARDYLRNSLSNVPARAWTAVV-PTADPVALDLIAKMLEFNPQRRISTEQA 314
Query: 358 CAHPFFDELREP 369
HP+F+ L +P
Sbjct: 315 LRHPYFESLFDP 326
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 151/300 (50%), Gaps = 27/300 (9%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-NRELQLMR-LMDHPNVISL 135
Y R +G G + VF+A + E V +K + ++ K RE++++ L PN+I+L
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILENLRGGPNIITL 97
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
S+ LV E+V T ++ L Q + ++ Y Y+I + L Y H
Sbjct: 98 ADIVKDPVSRTPA---LVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILKALDYCH 148
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
++ G+ HRDVKP N+++D +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 149 SM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 256 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT-- 312
Y S+D+WS GC+LA ++ +P F G + DQLV I KVLGT E++ Y
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIE 264
Query: 313 -DFRFPQI----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
D RF I W + H + PEA+D +LL+Y R TA EA HP+F
Sbjct: 265 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 158/312 (50%), Gaps = 30/312 (9%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKV---LQDRRYKN------------RELQL 123
Y +R + +GS+G V A G VAIK+V + D R N RE++L
Sbjct: 24 YTVQRFISSGSYGAVC-AGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 124 MRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLI--YVK 181
+ HPN++ L+ F L LV E + + +V+ +QR+ + +++
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH-----DQRIVISPQHIQ 137
Query: 182 LYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYIC 241
+ Y I GL +H GV HRD+ P N+L+ + + +CDF A+ Y+
Sbjct: 138 YFMYHILLGLHVLHEA-GVVHRDLHPGNILLAD-NNDITICDFNLAREDTADANKTHYVT 195
Query: 242 SRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 301
R+YRAPEL+ +T +D+WSAGCV+AE+ + LF G +QL +I++V+GTP
Sbjct: 196 HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI 255
Query: 302 EEIRCM-NPNYTDF---RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 357
E++ +P+ D+ + A W V P A+DL +++L+++P R + +A
Sbjct: 256 EDVVMFSSPSARDYLRNSLSNVPARAWTAVV-PTADPVALDLIAKMLEFNPQRRISTEQA 314
Query: 358 CAHPFFDELREP 369
HP+F+ L +P
Sbjct: 315 LRHPYFESLFDP 326
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 166/315 (52%), Gaps = 35/315 (11%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 131 NVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+I L + F S +E + +VME + + +V++ ++RM + YQ+
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELD-HERMSYL-----LYQMLC 137
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
G+ ++H+ G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE
Sbjct: 138 GIKHLHSA-GIIHRDLKPSNIVVKS-DATLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+I G Y ++DIWS GC++ E++ G LFPG + +DQ ++I+ LGTP+ E ++ + P
Sbjct: 196 VILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 310 ---NYTDFRFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSPSLRCTAL 355
Y + R P+ + + K+F +K +A DL S++L S R +
Sbjct: 255 TVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 313
Query: 356 EACAHPFFDELREPN 370
EA HP+ + +P+
Sbjct: 314 EALQHPYINVWYDPS 328
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 165/313 (52%), Gaps = 33/313 (10%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL--SRPFQNQTHAKRAYRELVLMKXVNHK 83
Query: 131 NVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+ISL + F + +E + LVME + + +V++ ++RM + YQ+
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELD-HERMSYL-----LYQMLC 137
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
G+ ++H+ G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE
Sbjct: 138 GIKHLHSA-GIIHRDLKPSNIVVKS-DXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P
Sbjct: 196 VILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 310 ---NYTDFR-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 356
NY + R FP++ P +K +A DL S++L P+ R + +
Sbjct: 255 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 314
Query: 357 ACAHPFFDELREP 369
A HP+ + +P
Sbjct: 315 ALQHPYINVWYDP 327
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 169/332 (50%), Gaps = 41/332 (12%)
Query: 69 KNGEPKQTISYMAERVVGTGSFGIVFQAKCLETG-ETVAIKKVLQDRRYKN------REL 121
K+G + Y +G G++G VF+A+ L+ G VA+K+V + RE+
Sbjct: 3 KDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV 62
Query: 122 QLMR---LMDHPNVISL-KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPL 177
++R +HPNV+ L C S T + E L LV E+V + + L +P
Sbjct: 63 AVLRHLETFEHPNVVRLFDVCTVSRTDR-ETKLTLVFEHVDQDLTTYLDKVPEPG--VPT 119
Query: 178 IYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI 237
+K +Q+ RGL ++H+ V HRD+KPQN+LV + Q+KL DFG A++ A
Sbjct: 120 ETIKDMMFQLLRGLDFLHS-HRVVHRDLKPQNILVTS-SGQIKLADFGLARIYSFQMALT 177
Query: 238 SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG 297
S + + +YRAPE++ ++ Y T +D+WS GC+ AE+ +PLF G + VDQL +I+ V+G
Sbjct: 178 SVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG 236
Query: 298 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKR--MPPEAI---------DLASRLLQY 346
P E+ +P+ A P + FH + P E DL + L +
Sbjct: 237 LPGEED------------WPRDVALP-RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTF 283
Query: 347 SPSLRCTALEACAHPFFDELREPNARLPNGRP 378
+P+ R +A A +HP+F +L L + P
Sbjct: 284 NPAKRISAYSALSHPYFQDLERCKENLDSHLP 315
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 166/315 (52%), Gaps = 35/315 (11%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+I L + F S +E + +VME + + +V++ ++RM + YQ+
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELD-HERMSYL-----LYQMLC 137
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
G+ ++H+ G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE
Sbjct: 138 GIKHLHSA-GIIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+I G Y ++DIWS GC++ E++ G LFPG + +DQ ++I+ LGTP+ E ++ + P
Sbjct: 196 VILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 310 ---NYTDFRFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSPSLRCTAL 355
Y + R P+ + + K+F +K +A DL S++L S R +
Sbjct: 255 TVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 313
Query: 356 EACAHPFFDELREPN 370
EA HP+ + +P+
Sbjct: 314 EALQHPYINVWYDPS 328
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 166/315 (52%), Gaps = 35/315 (11%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM++++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKL--SRPFQNQTHAKRAYRELVLMKVVNHK 83
Query: 131 NVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+I L + F S +E + +VME + + +V++ ++RM + YQ+
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELD-HERMSYL-----LYQMLV 137
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
G+ ++H+ G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE
Sbjct: 138 GIKHLHSA-GIIHRDLKPSNIVVKS-DATLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+I G Y ++DIWS G ++ E++ G LFPG + +DQ ++I+ LGTP+ E ++ + P
Sbjct: 196 VILGMG-YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 310 ---NYTDFRFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSPSLRCTAL 355
Y + R P+ + + K+F +K +A DL S++L S R +
Sbjct: 255 TVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 313
Query: 356 EACAHPFFDELREPN 370
EA HP+ + +P+
Sbjct: 314 EALQHPYINVWYDPS 328
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 104/320 (32%), Positives = 166/320 (51%), Gaps = 41/320 (12%)
Query: 69 KNGEPKQTISYMAERVVGTGSFGIVFQAKCLETG-ETVAIKKVLQDRRYKN------REL 121
K+G + Y +G G++G VF+A+ L+ G VA+K+V + RE+
Sbjct: 3 KDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV 62
Query: 122 QLMR---LMDHPNVISL-KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPL 177
++R +HPNV+ L C S T + E L LV E+V + + L +P
Sbjct: 63 AVLRHLETFEHPNVVRLFDVCTVSRTDR-ETKLTLVFEHVDQDLTTYLDKVPEPG--VPT 119
Query: 178 IYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI 237
+K +Q+ RGL ++H+ V HRD+KPQN+LV + Q+KL DFG A++ A
Sbjct: 120 ETIKDMMFQLLRGLDFLHS-HRVVHRDLKPQNILVTS-SGQIKLADFGLARIYSFQMALT 177
Query: 238 SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG 297
S + + +YRAPE++ ++ Y T +D+WS GC+ AE+ +PLF G + VDQL +I+ V+G
Sbjct: 178 SVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG 236
Query: 298 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKR--MPPEAI---------DLASRLLQY 346
P E+ +P+ A P + FH + P E DL + L +
Sbjct: 237 LPGEED------------WPRDVALP-RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTF 283
Query: 347 SPSLRCTALEACAHPFFDEL 366
+P+ R +A A +HP+F +L
Sbjct: 284 NPAKRISAYSALSHPYFQDL 303
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 166/315 (52%), Gaps = 35/315 (11%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+I L + F S +E + +VME + + +V++ ++RM + YQ+
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYL-----LYQMLC 137
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
G+ ++H+ G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE
Sbjct: 138 GIKHLHSA-GIIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+I G Y ++DIWS GC++ E++ G LFPG + +DQ ++I+ LGTP+ E ++ + P
Sbjct: 196 VILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQP 254
Query: 310 ---NYTDFRFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSPSLRCTAL 355
Y + R P+ + + K+F +K +A DL S++L S R +
Sbjct: 255 TVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 313
Query: 356 EACAHPFFDELREPN 370
EA HP+ + +P+
Sbjct: 314 EALQHPYINVWYDPS 328
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 162/313 (51%), Gaps = 33/313 (10%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A G VA+KK+ R ++N REL L++ ++H
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKL--SRPFQNQTHAKRAYRELVLLKCVNHK 83
Query: 131 NVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+ISL + F + +E + LVME + + +V+ H ++RM + YQ+
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-HMELDHERMSYL-----LYQMLC 137
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
G+ ++H+ G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE
Sbjct: 138 GIKHLHSA-GIIHRDLKPSNIVVKS-DCTLKILDFGLARTACTNFMMTPYVVTRYYRAPE 195
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+I G Y ++DIWS GC++ EL+ G +F G + +DQ ++I+ LGTP+ E + + P
Sbjct: 196 VILGMG-YAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQP 254
Query: 310 ---NYTDFR--FPQIKAH--------PWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 356
NY + R +P IK P K +A DL S++L P R + E
Sbjct: 255 TVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDE 314
Query: 357 ACAHPFFDELREP 369
A HP+ +P
Sbjct: 315 ALRHPYITVWYDP 327
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 165/313 (52%), Gaps = 33/313 (10%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+ISL + F + +E + LVME + + +V++ ++RM + YQ+
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYL-----LYQMLC 137
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
G+ ++H+ G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE
Sbjct: 138 GIKHLHSA-GIIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P
Sbjct: 196 VILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 310 ---NYTDFR-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 356
NY + R FP++ P +K +A DL S++L P+ R + +
Sbjct: 255 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 314
Query: 357 ACAHPFFDELREP 369
A HP+ + +P
Sbjct: 315 ALQHPYINVWYDP 327
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 152/292 (52%), Gaps = 24/292 (8%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G++G V++A T ETVAIK++ + + RE+ L++ + H N+I LK
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
L+L+ EY LK Y N + + +K + YQ+ G+ + H+
Sbjct: 102 IHHNHR-----LHLIFEYAEND----LKKYMDKNPDVSMRVIKSFLYQLINGVNFCHS-R 151
Query: 199 GVCHRDVKPQNLLVD----PLTHQVKLCDFGSAKVLVKGEANISY-ICSRYYRAPELIFG 253
HRD+KPQNLL+ T +K+ DFG A+ ++ I + +YR PE++ G
Sbjct: 152 RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLG 211
Query: 254 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN--PNY 311
+ Y+TS+DIWS C+ AE+L+ PLFPG++ +DQL +I +VLG P + P++
Sbjct: 212 SRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDW 271
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
FP+ + +V + E +DL + +L+ P R +A A HP+F
Sbjct: 272 KQ-SFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYF 322
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 166/315 (52%), Gaps = 35/315 (11%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 85
Query: 131 NVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+I L + F S +E + +VME + + +V++ ++RM + YQ+
Sbjct: 86 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYL-----LYQMLC 139
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
G+ ++H+ G+ HRD+KP N++V +K+ DFG A+ + ++ +RYYRAPE
Sbjct: 140 GIKHLHSA-GIIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPE 197
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+I G Y ++DIWS GC++ E++ G LFPG + +DQ ++I+ LGTP E ++ + P
Sbjct: 198 VILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 256
Query: 310 ---NYTDFRFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSPSLRCTAL 355
Y + R P+ + + K+F +K +A DL S++L S R +
Sbjct: 257 TVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 315
Query: 356 EACAHPFFDELREPN 370
EA HP+ + +P+
Sbjct: 316 EALQHPYINVWYDPS 330
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 165/313 (52%), Gaps = 33/313 (10%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 121
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+ISL + F + +E + LVME + + +V++ ++RM + YQ+
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYL-----LYQMLC 175
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
G+ ++H+ G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE
Sbjct: 176 GIKHLHSA-GIIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 233
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P
Sbjct: 234 VILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 292
Query: 310 ---NYTDFR-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 356
NY + R FP++ P +K +A DL S++L P+ R + +
Sbjct: 293 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 352
Query: 357 ACAHPFFDELREP 369
A HP+ + +P
Sbjct: 353 ALQHPYINVWYDP 365
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 165/313 (52%), Gaps = 33/313 (10%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 84
Query: 131 NVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+ISL + F + +E + LVME + + +V++ ++RM + YQ+
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYL-----LYQMLC 138
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
G+ ++H+ G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE
Sbjct: 139 GIKHLHSA-GIIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 196
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P
Sbjct: 197 VILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 255
Query: 310 ---NYTDFR-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 356
NY + R FP++ P +K +A DL S++L P+ R + +
Sbjct: 256 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 315
Query: 357 ACAHPFFDELREP 369
A HP+ + +P
Sbjct: 316 ALQHPYINVWYDP 328
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 165/313 (52%), Gaps = 33/313 (10%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 131 NVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+ISL + F + +E + LVME + + +V++ ++RM + YQ+
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYL-----LYQMLC 137
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
G+ ++H+ G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE
Sbjct: 138 GIKHLHSA-GIIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P
Sbjct: 196 VILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 310 ---NYTDFR-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 356
NY + R FP++ P +K +A DL S++L P+ R + +
Sbjct: 255 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 314
Query: 357 ACAHPFFDELREP 369
A HP+ + +P
Sbjct: 315 ALQHPYINVWYDP 327
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 165/313 (52%), Gaps = 33/313 (10%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 84
Query: 131 NVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+ISL + F + +E + LVME + + +V++ ++RM + YQ+
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYL-----LYQMLC 138
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
G+ ++H+ G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE
Sbjct: 139 GIKHLHSA-GIIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 196
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P
Sbjct: 197 VILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 255
Query: 310 ---NYTDFR-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 356
NY + R FP++ P +K +A DL S++L P+ R + +
Sbjct: 256 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 315
Query: 357 ACAHPFFDELREP 369
A HP+ + +P
Sbjct: 316 ALQHPYINVWYDP 328
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 165/313 (52%), Gaps = 33/313 (10%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 82
Query: 131 NVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+ISL + F + +E + LVME + + +V++ ++RM + YQ+
Sbjct: 83 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYL-----LYQMLC 136
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
G+ ++H+ G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE
Sbjct: 137 GIKHLHSA-GIIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 194
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P
Sbjct: 195 VILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 253
Query: 310 ---NYTDFR-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 356
NY + R FP++ P +K +A DL S++L P+ R + +
Sbjct: 254 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 313
Query: 357 ACAHPFFDELREP 369
A HP+ + +P
Sbjct: 314 ALQHPYINVWYDP 326
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 155/307 (50%), Gaps = 33/307 (10%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGET--VAIKKVLQDRRYKNRELQLMRLMDHPNVISL 135
Y R VG G + VF+ + E + I K ++ ++ K L LM PN++ L
Sbjct: 32 DYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLMGGPNIVKL 91
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
SK +L+ EYV T ++VL Y ++ ++ Y Y++ + L Y H
Sbjct: 92 LDIVRDQHSKTP---SLIFEYVNNTDFKVL--YPTLTDYD----IRYYIYELLKALDYCH 142
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
+ G+ HRDVKP N+++D +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 143 S-QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 256 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+Y S+D+WS GC+ A ++ +P F G + DQLV+I KVLGT +N +
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LNVYLNKY 255
Query: 315 RF---PQIKA-------HPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAH 360
R PQ++A PW K + + PEAID +LL+Y R TALEA H
Sbjct: 256 RIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 361 PFFDELR 367
P+F ++R
Sbjct: 316 PYFQQVR 322
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 165/313 (52%), Gaps = 33/313 (10%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 121
Query: 131 NVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+ISL + F + +E + LVME + + +V++ ++RM + YQ+
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYL-----LYQMLC 175
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
G+ ++H+ G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE
Sbjct: 176 GIKHLHSA-GIIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 233
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P
Sbjct: 234 VILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 292
Query: 310 ---NYTDFR-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 356
NY + R FP++ P +K +A DL S++L P+ R + +
Sbjct: 293 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 352
Query: 357 ACAHPFFDELREP 369
A HP+ + +P
Sbjct: 353 ALQHPYINVWYDP 365
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 165/313 (52%), Gaps = 33/313 (10%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 77
Query: 131 NVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+ISL + F + +E + LVME + + +V++ ++RM + YQ+
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYL-----LYQMLC 131
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
G+ ++H+ G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE
Sbjct: 132 GIKHLHSA-GIIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 189
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P
Sbjct: 190 VILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 248
Query: 310 ---NYTDFR-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 356
NY + R FP++ P +K +A DL S++L P+ R + +
Sbjct: 249 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 308
Query: 357 ACAHPFFDELREP 369
A HP+ + +P
Sbjct: 309 ALQHPYINVWYDP 321
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 165/313 (52%), Gaps = 33/313 (10%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 76
Query: 131 NVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+ISL + F + +E + LVME + + +V++ ++RM + YQ+
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYL-----LYQMLC 130
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
G+ ++H+ G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE
Sbjct: 131 GIKHLHSA-GIIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 188
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P
Sbjct: 189 VILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 247
Query: 310 ---NYTDFR-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 356
NY + R FP++ P +K +A DL S++L P+ R + +
Sbjct: 248 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 307
Query: 357 ACAHPFFDELREP 369
A HP+ + +P
Sbjct: 308 ALQHPYINVWYDP 320
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 165/313 (52%), Gaps = 33/313 (10%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 77
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+ISL + F + +E + LVME + + +V++ ++RM + YQ+
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYL-----LYQMLC 131
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
G+ ++H+ G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE
Sbjct: 132 GIKHLHSA-GIIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 189
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P
Sbjct: 190 VILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 248
Query: 310 ---NYTDFR-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 356
NY + R FP++ P +K +A DL S++L P+ R + +
Sbjct: 249 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 308
Query: 357 ACAHPFFDELREP 369
A HP+ + +P
Sbjct: 309 ALQHPYINVWYDP 321
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/308 (31%), Positives = 163/308 (52%), Gaps = 33/308 (10%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKL--SRPFQNQTHAKRAYRELVLMKXVNHK 83
Query: 131 NVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+ISL + F + +E + LVME + + +V++ ++RM + YQ+
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYL-----LYQMLC 137
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
G+ ++H+ G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE
Sbjct: 138 GIKHLHSA-GIIHRDLKPSNIVVKS-DXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P
Sbjct: 196 VILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 310 ---NYTDFR-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 356
NY + R FP++ P +K +A DL S++L P+ R + +
Sbjct: 255 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD 314
Query: 357 ACAHPFFD 364
A HP+ +
Sbjct: 315 ALQHPYIN 322
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 165/315 (52%), Gaps = 35/315 (11%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 84
Query: 131 NVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+I L + F S +E + +VME + + +V++ ++RM + YQ+
Sbjct: 85 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYL-----LYQMLC 138
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
G+ ++H+ G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE
Sbjct: 139 GIKHLHSA-GIIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 196
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+I G Y ++DIWS GC++ E++ G LFPG + +DQ ++I+ LGTP E ++ + P
Sbjct: 197 VILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 255
Query: 310 ---NYTDFRFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSPSLRCTAL 355
Y + R P+ + + K+F +K +A DL S++L S R +
Sbjct: 256 TVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 314
Query: 356 EACAHPFFDELREPN 370
EA HP+ + +P+
Sbjct: 315 EALQHPYINVWYDPS 329
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 165/315 (52%), Gaps = 35/315 (11%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 131 NVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+I L + F S +E + +VME + + +V++ ++RM + YQ+
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYL-----LYQMLC 137
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
G+ ++H+ G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE
Sbjct: 138 GIKHLHSA-GIIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+I G Y ++DIWS GC++ E++ G LFPG + +DQ ++I+ LGTP E ++ + P
Sbjct: 196 VILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 310 ---NYTDFRFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSPSLRCTAL 355
Y + R P+ + + K+F +K +A DL S++L S R +
Sbjct: 255 TVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 313
Query: 356 EACAHPFFDELREPN 370
EA HP+ + +P+
Sbjct: 314 EALQHPYINVWYDPS 328
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 163/314 (51%), Gaps = 35/314 (11%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A G VA+KK+ R ++N REL L++ ++H
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKL--SRPFQNQTHAKRAYRELVLLKCVNHK 81
Query: 131 NVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+ISL + F + +E + LVME + + +V+ H ++RM + YQ+
Sbjct: 82 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-HMELDHERMSYL-----LYQMLC 135
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
G+ ++H+ G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE
Sbjct: 136 GIKHLHSA-GIIHRDLKPSNIVVKS-DCTLKILDFGLARTASTNFMMTPYVVTRYYRAPE 193
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+I G Y ++DIWS GC++ EL+ G +F G + +DQ ++I+ LGTP+ E + + P
Sbjct: 194 VILGMG-YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQP 252
Query: 310 ---NYTDFRFPQIKAHPWHKVFHKRMPP-----------EAIDLASRLLQYSPSLRCTAL 355
NY + R P + ++F + P +A DL S++L P R +
Sbjct: 253 TVRNYVENR-PAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVD 311
Query: 356 EACAHPFFDELREP 369
EA HP+ +P
Sbjct: 312 EALRHPYITVWYDP 325
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/317 (32%), Positives = 164/317 (51%), Gaps = 41/317 (12%)
Query: 69 KNGEPKQTISYMAERVVGTGSFGIVFQAKCLETG-ETVAIKKVLQDRRYKN------REL 121
K+G + Y +G G++G VF+A+ L+ G VA+K+V + RE+
Sbjct: 3 KDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV 62
Query: 122 QLMR---LMDHPNVISL-KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPL 177
++R +HPNV+ L C S T + E L LV E+V + + L +P
Sbjct: 63 AVLRHLETFEHPNVVRLFDVCTVSRTDR-ETKLTLVFEHVDQDLTTYLDKVPEPG--VPT 119
Query: 178 IYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI 237
+K +Q+ RGL ++H+ V HRD+KPQN+LV + Q+KL DFG A++ A
Sbjct: 120 ETIKDMMFQLLRGLDFLHS-HRVVHRDLKPQNILVTS-SGQIKLADFGLARIYSFQMALT 177
Query: 238 SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG 297
S + + +YRAPE++ ++ Y T +D+WS GC+ AE+ +PLF G + VDQL +I+ V+G
Sbjct: 178 SVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG 236
Query: 298 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKR--MPPEAI---------DLASRLLQY 346
P E+ +P+ A P + FH + P E DL + L +
Sbjct: 237 LPGEED------------WPRDVALP-RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTF 283
Query: 347 SPSLRCTALEACAHPFF 363
+P+ R +A A +HP+F
Sbjct: 284 NPAKRISAYSALSHPYF 300
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 154/307 (50%), Gaps = 33/307 (10%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGET--VAIKKVLQDRRYKNRELQLMRLMDHPNVISL 135
Y R VG G + VF+ + E + I K ++ ++ K L L PN++ L
Sbjct: 53 DYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKL 112
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
SK +L+ EYV T ++VL Y ++ ++ Y Y++ + L Y H
Sbjct: 113 LDIVRDQHSKTP---SLIFEYVNNTDFKVL--YPTLTDYD----IRYYIYELLKALDYCH 163
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
+ G+ HRDVKP N+++D +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 164 S-QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 222
Query: 256 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+Y S+D+WS GC+ A ++ +P F G + DQLV+I KVLGT +N +
Sbjct: 223 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LNAYLNKY 276
Query: 315 RF---PQIKA-------HPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAH 360
R PQ++A PW K + + PEAID +LL+Y R TALEA H
Sbjct: 277 RIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 336
Query: 361 PFFDELR 367
P+F ++R
Sbjct: 337 PYFQQVR 343
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 153/310 (49%), Gaps = 27/310 (8%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ--LMRLMDHPNVISL 135
Y R +G G + VF+A + E VA+K + ++ K + L L PN+I+L
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIKILENLRGGPNIITL 97
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
S+ LV E+V T ++ L Q + ++ Y Y+I + L Y H
Sbjct: 98 ADIVKDPVSRTPA---LVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILKALDYCH 148
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
++ G+ HRDVKP N+L+D +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 149 SM-GIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 256 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT-- 312
Y S+D+WS GC+LA ++ +P F G + DQLV I KVLGT E++ Y
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIE 264
Query: 313 -DFRFPQI----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
D RF I W + H + PEA+D +LL+Y R TA EA HP+F
Sbjct: 265 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Query: 364 DELREPNARL 373
+ + AR+
Sbjct: 325 YTVVKDQARM 334
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 154/307 (50%), Gaps = 33/307 (10%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGET--VAIKKVLQDRRYKNRELQLMRLMDHPNVISL 135
Y R VG G + VF+ + E + I K ++ ++ K L L PN++ L
Sbjct: 33 DYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKL 92
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
SK +L+ EYV T ++VL Y ++ ++ Y Y++ + L Y H
Sbjct: 93 LDIVRDQHSKTP---SLIFEYVNNTDFKVL--YPTLTDYD----IRYYIYELLKALDYCH 143
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
+ G+ HRDVKP N+++D +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 144 S-QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 202
Query: 256 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+Y S+D+WS GC+ A ++ +P F G + DQLV+I KVLGT +N +
Sbjct: 203 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LNVYLNKY 256
Query: 315 RF---PQIKA-------HPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAH 360
R PQ++A PW K + + PEAID +LL+Y R TALEA H
Sbjct: 257 RIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 316
Query: 361 PFFDELR 367
P+F ++R
Sbjct: 317 PYFQQVR 323
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 154/307 (50%), Gaps = 33/307 (10%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGET--VAIKKVLQDRRYKNRELQLMRLMDHPNVISL 135
Y R VG G + VF+ + E + I K ++ ++ K L L PN++ L
Sbjct: 32 DYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKL 91
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
SK +L+ EYV T ++VL Y ++ ++ Y Y++ + L Y H
Sbjct: 92 LDIVRDQHSKTP---SLIFEYVNNTDFKVL--YPTLTDYD----IRYYIYELLKALDYCH 142
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
+ G+ HRDVKP N+++D +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 143 S-QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 256 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+Y S+D+WS GC+ A ++ +P F G + DQLV+I KVLGT +N +
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LNVYLNKY 255
Query: 315 RF---PQIKA-------HPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAH 360
R PQ++A PW K + + PEAID +LL+Y R TALEA H
Sbjct: 256 RIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 361 PFFDELR 367
P+F ++R
Sbjct: 316 PYFQQVR 322
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 154/307 (50%), Gaps = 33/307 (10%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGET--VAIKKVLQDRRYKNRELQLMRLMDHPNVISL 135
Y R VG G + VF+ + E + I K ++ ++ K L L PN++ L
Sbjct: 32 DYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKL 91
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
SK +L+ EYV T ++VL Y ++ ++ Y Y++ + L Y H
Sbjct: 92 LDIVRDQHSKTP---SLIFEYVNNTDFKVL--YPTLTDYD----IRYYIYELLKALDYCH 142
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
+ G+ HRDVKP N+++D +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 143 S-QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 256 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+Y S+D+WS GC+ A ++ +P F G + DQLV+I KVLGT +N +
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LNVYLNKY 255
Query: 315 RF---PQIKA-------HPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAH 360
R PQ++A PW K + + PEAID +LL+Y R TALEA H
Sbjct: 256 RIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 361 PFFDELR 367
P+F ++R
Sbjct: 316 PYFQQVR 322
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 154/307 (50%), Gaps = 33/307 (10%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGET--VAIKKVLQDRRYKNRELQLMRLMDHPNVISL 135
Y R VG G + VF+ + E + I K ++ ++ K L L PN++ L
Sbjct: 32 DYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKL 91
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
SK +L+ EYV T ++VL Y ++ ++ Y Y++ + L Y H
Sbjct: 92 LDIVRDQHSKTP---SLIFEYVNNTDFKVL--YPTLTDYD----IRYYIYELLKALDYCH 142
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
+ G+ HRDVKP N+++D +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 143 S-QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 256 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+Y S+D+WS GC+ A ++ +P F G + DQLV+I KVLGT +N +
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LNVYLNKY 255
Query: 315 RF---PQIKA-------HPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAH 360
R PQ++A PW K + + PEAID +LL+Y R TALEA H
Sbjct: 256 RIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 361 PFFDELR 367
P+F ++R
Sbjct: 316 PYFQQVR 322
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 154/307 (50%), Gaps = 33/307 (10%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGET--VAIKKVLQDRRYKNRELQLMRLMDHPNVISL 135
Y R VG G + VF+ + E + I K ++ ++ K L L PN++ L
Sbjct: 34 DYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKL 93
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
SK +L+ EYV T ++VL Y ++ ++ Y Y++ + L Y H
Sbjct: 94 LDIVRDQHSKTP---SLIFEYVNNTDFKVL--YPTLTDYD----IRYYIYELLKALDYCH 144
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
+ G+ HRDVKP N+++D +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 145 S-QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 203
Query: 256 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+Y S+D+WS GC+ A ++ +P F G + DQLV+I KVLGT +N +
Sbjct: 204 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LNVYLNKY 257
Query: 315 RF---PQIKA-------HPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAH 360
R PQ++A PW K + + PEAID +LL+Y R TALEA H
Sbjct: 258 RIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 317
Query: 361 PFFDELR 367
P+F ++R
Sbjct: 318 PYFQQVR 324
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 154/307 (50%), Gaps = 33/307 (10%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGET--VAIKKVLQDRRYKNRELQLMRLMDHPNVISL 135
Y R VG G + VF+ + E + I K ++ ++ K L L PN++ L
Sbjct: 33 DYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKL 92
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
SK +L+ EYV T ++VL Y ++ ++ Y Y++ + L Y H
Sbjct: 93 LDIVRDQHSKTP---SLIFEYVNNTDFKVL--YPTLTDYD----IRYYIYELLKALDYCH 143
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
+ G+ HRDVKP N+++D +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 144 S-QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 202
Query: 256 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+Y S+D+WS GC+ A ++ +P F G + DQLV+I KVLGT +N +
Sbjct: 203 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LNVYLNKY 256
Query: 315 RF---PQIKA-------HPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAH 360
R PQ++A PW K + + PEAID +LL+Y R TALEA H
Sbjct: 257 RIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 316
Query: 361 PFFDELR 367
P+F ++R
Sbjct: 317 PYFQQVR 323
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 154/307 (50%), Gaps = 33/307 (10%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGET--VAIKKVLQDRRYKNRELQLMRLMDHPNVISL 135
Y R VG G + VF+ + E + I K ++ ++ K L L PN++ L
Sbjct: 32 DYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKL 91
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
SK +L+ EYV T ++VL Y ++ ++ Y Y++ + L Y H
Sbjct: 92 LDIVRDQHSKTP---SLIFEYVNNTDFKVL--YPTLTDYD----IRYYIYELLKALDYCH 142
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
+ G+ HRDVKP N+++D +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 143 S-QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 256 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+Y S+D+WS GC+ A ++ +P F G + DQLV+I KVLGT +N +
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LNVYLNKY 255
Query: 315 RF---PQIKA-------HPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAH 360
R PQ++A PW K + + PEAID +LL+Y R TALEA H
Sbjct: 256 RIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 361 PFFDELR 367
P+F ++R
Sbjct: 316 PYFQQVR 322
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 154/307 (50%), Gaps = 33/307 (10%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGET--VAIKKVLQDRRYKNRELQLMRLMDHPNVISL 135
Y R VG G + VF+ + E + I K ++ ++ K L L PN++ L
Sbjct: 32 DYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKL 91
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
SK +L+ EYV T ++VL Y ++ ++ Y Y++ + L Y H
Sbjct: 92 LDIVRDQHSKTP---SLIFEYVNNTDFKVL--YPTLTDYD----IRYYIYELLKALDYCH 142
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
+ G+ HRDVKP N+++D +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 143 S-QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 256 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+Y S+D+WS GC+ A ++ +P F G + DQLV+I KVLGT +N +
Sbjct: 202 DYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG------LNVYLNKY 255
Query: 315 RF---PQIKA-------HPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAH 360
R PQ++A PW K + + PEAID +LL+Y R TALEA H
Sbjct: 256 RIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTH 315
Query: 361 PFFDELR 367
P+F ++R
Sbjct: 316 PYFQQVR 322
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 165/315 (52%), Gaps = 35/315 (11%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 31 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 88
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+I L + F S +E + +VME + + +V++ ++RM + YQ+
Sbjct: 89 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYL-----LYQMLC 142
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
G+ ++H+ G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE
Sbjct: 143 GIKHLHSA-GIIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 200
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+I G Y ++D+WS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P
Sbjct: 201 VILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 259
Query: 310 ---NYTDFRFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSPSLRCTAL 355
Y + R P+ + + K+F +K +A DL S++L S R +
Sbjct: 260 TVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 318
Query: 356 EACAHPFFDELREPN 370
EA HP+ + +P+
Sbjct: 319 EALQHPYINVWYDPS 333
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 165/315 (52%), Gaps = 35/315 (11%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 77
Query: 131 NVISLKHCFFSTTSKDEL-FLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+I L + F S +E + +VME + + +V++ ++RM + YQ+
Sbjct: 78 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYL-----LYQMLC 131
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
G+ ++H+ G+ HRD+KP N++V +K+ DFG A+ Y+ +RYYRAPE
Sbjct: 132 GIKHLHSA-GIIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 189
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+I G Y ++D+WS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P
Sbjct: 190 VILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 248
Query: 310 ---NYTDFRFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSPSLRCTAL 355
Y + R P+ + + K+F +K +A DL S++L S R +
Sbjct: 249 TVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 307
Query: 356 EACAHPFFDELREPN 370
EA HP+ + +P+
Sbjct: 308 EALQHPYINVWYDPS 322
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/315 (31%), Positives = 164/315 (52%), Gaps = 35/315 (11%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 131 NVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+I L + F S +E + +VME + + +V++ ++RM + YQ+
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYL-----LYQMLC 137
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
G+ ++H+ G+ HRD+KP N++V +K+ DFG A+ + +RYYRAPE
Sbjct: 138 GIKHLHSA-GIIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPE 195
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+I G Y ++DIWS GC++ E++ G LFPG + +DQ ++I+ LGTP E ++ + P
Sbjct: 196 VILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 310 ---NYTDFRFPQIKAHPWHKVFHKRMPP-----------EAIDLASRLLQYSPSLRCTAL 355
Y + R P+ + + K+F + P +A DL S++L S R +
Sbjct: 255 TVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVD 313
Query: 356 EACAHPFFDELREPN 370
EA HP+ + +P+
Sbjct: 314 EALQHPYINVWYDPS 328
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 153/310 (49%), Gaps = 27/310 (8%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ--LMRLMDHPNVISL 135
Y R +G G + VF+A + E V +K + ++ K + L L PN+I+L
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITL 97
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
S+ LV E+V T ++ L+ Q + ++ Y Y+I + L Y H
Sbjct: 98 ADIVKDPVSRTPA---LVFEHVNNTDFKQLR------QTLTDYDIRFYMYEILKALDYCH 148
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
++ G+ HRDVKP N+++D +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 149 SM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 256 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT-- 312
Y S+D+WS GC+LA ++ +P F G + DQLV I KVLGT E++ Y
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIE 264
Query: 313 -DFRFPQI----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
D RF I W + H + PEA+D +LL+Y R TA EA HP+F
Sbjct: 265 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Query: 364 DELREPNARL 373
+ + AR+
Sbjct: 325 YTVVKDQARM 334
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 134 bits (337), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 152/310 (49%), Gaps = 27/310 (8%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ--LMRLMDHPNVISL 135
Y R +G G + VF+A + E V +K + ++ K + L L PN+I+L
Sbjct: 43 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITL 102
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
S+ LV E+V T ++ L Q + ++ Y Y+I + L Y H
Sbjct: 103 ADIVKDPVSRTPA---LVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILKALDYCH 153
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
++ G+ HRDVKP N+++D +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 154 SM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 212
Query: 256 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT-- 312
Y S+D+WS GC+LA ++ +P F G + DQLV I KVLGT E++ Y
Sbjct: 213 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIE 269
Query: 313 -DFRFPQI----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
D RF I W + H + PEA+D +LL+Y R TA EA HP+F
Sbjct: 270 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 329
Query: 364 DELREPNARL 373
+ + AR+
Sbjct: 330 YTVVKDQARM 339
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 134 bits (337), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 152/310 (49%), Gaps = 27/310 (8%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ--LMRLMDHPNVISL 135
Y R +G G + VF+A + E V +K + ++ K + L L PN+I+L
Sbjct: 37 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITL 96
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
S+ LV E+V T ++ L Q + ++ Y Y+I + L Y H
Sbjct: 97 ADIVKDPVSRTPA---LVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILKALDYCH 147
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
++ G+ HRDVKP N+++D +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 148 SM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 206
Query: 256 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT-- 312
Y S+D+WS GC+LA ++ +P F G + DQLV I KVLGT E++ Y
Sbjct: 207 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIE 263
Query: 313 -DFRFPQI----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
D RF I W + H + PEA+D +LL+Y R TA EA HP+F
Sbjct: 264 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
Query: 364 DELREPNARL 373
+ + AR+
Sbjct: 324 YTVVKDQARM 333
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 134 bits (337), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 152/310 (49%), Gaps = 27/310 (8%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ--LMRLMDHPNVISL 135
Y R +G G + VF+A + E V +K + ++ K + L L PN+I+L
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITL 97
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
S+ LV E+V T ++ L Q + ++ Y Y+I + L Y H
Sbjct: 98 ADIVKDPVSRTPA---LVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILKALDYCH 148
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
++ G+ HRDVKP N+++D +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 149 SM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 256 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT-- 312
Y S+D+WS GC+LA ++ +P F G + DQLV I KVLGT E++ Y
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIE 264
Query: 313 -DFRFPQI----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
D RF I W + H + PEA+D +LL+Y R TA EA HP+F
Sbjct: 265 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Query: 364 DELREPNARL 373
+ + AR+
Sbjct: 325 YTVVKDQARM 334
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 134 bits (337), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 164/315 (52%), Gaps = 35/315 (11%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 131 NVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+I L + F S +E + +VME + + +V++ ++RM + YQ+
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYL-----LYQMLC 137
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
G+ ++H+ G+ HRD+KP N++V +K+ DFG A+ + +RYYRAPE
Sbjct: 138 GIKHLHSA-GIIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPE 195
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+I G Y ++DIWS GC++ E++ + LFPG + +DQ ++I+ LGTP ++ + P
Sbjct: 196 VILGMG-YKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQP 254
Query: 310 ---NYTDFRFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSPSLRCTAL 355
NY + R P+ + + K+F +K +A DL S++L S R +
Sbjct: 255 TVRNYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 313
Query: 356 EACAHPFFDELREPN 370
EA HP+ + +P+
Sbjct: 314 EALQHPYINVWYDPS 328
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 134 bits (337), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 152/310 (49%), Gaps = 27/310 (8%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ--LMRLMDHPNVISL 135
Y R +G G + VF+A + E V +K + ++ K + L L PN+I+L
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITL 97
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
S+ LV E+V T ++ L Q + ++ Y Y+I + L Y H
Sbjct: 98 ADIVKDPVSRTPA---LVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILKALDYCH 148
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
++ G+ HRDVKP N+++D +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 149 SM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 256 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT-- 312
Y S+D+WS GC+LA ++ +P F G + DQLV I KVLGT E++ Y
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIE 264
Query: 313 -DFRFPQI----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
D RF I W + H + PEA+D +LL+Y R TA EA HP+F
Sbjct: 265 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Query: 364 DELREPNARL 373
+ + AR+
Sbjct: 325 YTVVKDQARM 334
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 134 bits (337), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 152/310 (49%), Gaps = 27/310 (8%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ--LMRLMDHPNVISL 135
Y R +G G + VF+A + E V +K + ++ K + L L PN+I+L
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITL 97
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
S+ LV E+V T ++ L Q + ++ Y Y+I + L Y H
Sbjct: 98 ADIVKDPVSRTPA---LVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILKALDYCH 148
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
++ G+ HRDVKP N+++D +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 149 SM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 256 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT-- 312
Y S+D+WS GC+LA ++ +P F G + DQLV I KVLGT E++ Y
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIE 264
Query: 313 -DFRFPQI----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
D RF I W + H + PEA+D +LL+Y R TA EA HP+F
Sbjct: 265 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Query: 364 DELREPNARL 373
+ + AR+
Sbjct: 325 YTVVKDQARM 334
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 152/310 (49%), Gaps = 27/310 (8%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ--LMRLMDHPNVISL 135
Y R +G G + VF+A + E V +K + ++ K + L L PN+I+L
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITL 97
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
S+ LV E+V T ++ L Q + ++ Y Y+I + L Y H
Sbjct: 98 ADIVKDPVSRTPA---LVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILKALDYCH 148
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
++ G+ HRDVKP N+++D +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 149 SM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 256 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT-- 312
Y S+D+WS GC+LA ++ +P F G + DQLV I KVLGT E++ Y
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIE 264
Query: 313 -DFRFPQI----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
D RF I W + H + PEA+D +LL+Y R TA EA HP+F
Sbjct: 265 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Query: 364 DELREPNARL 373
+ + AR+
Sbjct: 325 YTVVKDQARM 334
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/310 (31%), Positives = 152/310 (49%), Gaps = 27/310 (8%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ--LMRLMDHPNVISL 135
Y R +G G + VF+A + E V +K + ++ K + L L PN+I+L
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITL 97
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
S+ LV E+V T ++ L Q + ++ Y Y+I + L Y H
Sbjct: 98 ADIVKDPVSRTPA---LVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILKALDYCH 148
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
++ G+ HRDVKP N+++D +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 149 SM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 256 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT-- 312
Y S+D+WS GC+LA ++ +P F G + DQLV I KVLGT E++ Y
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIE 264
Query: 313 -DFRFPQI----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
D RF I W + H + PEA+D +LL+Y R TA EA HP+F
Sbjct: 265 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Query: 364 DELREPNARL 373
+ + AR+
Sbjct: 325 YTVVKDQARM 334
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/309 (31%), Positives = 151/309 (48%), Gaps = 27/309 (8%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ--LMRLMDHPNVISL 135
Y R +G G + VF+A + E V +K + ++ K + L L PN+I+L
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITL 97
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
S+ LV E+V T ++ L Q + ++ Y Y+I + L Y H
Sbjct: 98 ADIVKDPVSRTPA---LVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILKALDYCH 148
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
++ G+ HRDVKP N+++D +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 149 SM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 256 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT-- 312
Y S+D+WS GC+LA ++ +P F G + DQLV I KVLGT E++ Y
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIE 264
Query: 313 -DFRFPQI----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
D RF I W + H + PEA+D +LL+Y R TA EA HP+F
Sbjct: 265 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Query: 364 DELREPNAR 372
+ + AR
Sbjct: 325 YTVVKDQAR 333
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 164/315 (52%), Gaps = 35/315 (11%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y + +G+G+ GIV A VAIKK+ R ++N REL LM+ ++H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKL--SRPFQNQTHAKRAYRELVLMKCVNHK 83
Query: 131 NVISLKHCFFSTTSKDELF-LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+I L + F S +E + +VME + + +V++ ++RM + YQ+
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYL-----LYQMLC 137
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
G+ ++H+ G+ HRD+KP N++V +K+ DFG A+ + +RYYRAPE
Sbjct: 138 GIKHLHSA-GIIHRDLKPSNIVVKS-DCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPE 195
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+I G Y ++D+WS GC++ E++ + LFPG + +DQ ++I+ LGTP E ++ + P
Sbjct: 196 VILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP 254
Query: 310 ---NYTDFRFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSPSLRCTAL 355
Y + R P+ + + K+F +K +A DL S++L S R +
Sbjct: 255 TVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 313
Query: 356 EACAHPFFDELREPN 370
EA HP+ + +P+
Sbjct: 314 EALQHPYINVWYDPS 328
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 147/300 (49%), Gaps = 27/300 (9%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ--LMRLMDHPNVISL 135
Y R +G G + VF+A + E V +K + ++ K + L L PN+I+L
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITL 97
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
S+ LV E+V T ++ L Q + ++ Y Y+I + L Y H
Sbjct: 98 ADIVKDPVSRTPA---LVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILKALDYCH 148
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
++ G+ HRDVKP N+++D +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 149 SM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 256 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT-- 312
Y S+D+WS GC+LA ++ +P F G + DQLV I KVLGT E++ Y
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIE 264
Query: 313 -DFRFPQI----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
D RF I W + H + PEA+D +LL+Y R TA EA HP+F
Sbjct: 265 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 147/300 (49%), Gaps = 27/300 (9%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ--LMRLMDHPNVISL 135
Y R +G G + VF+A + E V +K + ++ K + L L PN+I+L
Sbjct: 37 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITL 96
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
S+ LV E+V T ++ L Q + ++ Y Y+I + L Y H
Sbjct: 97 ADIVKDPVSRTPA---LVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILKALDYCH 147
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
++ G+ HRDVKP N+++D +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 148 SM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 206
Query: 256 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT-- 312
Y S+D+WS GC+LA ++ +P F G + DQLV I KVLGT E++ Y
Sbjct: 207 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIE 263
Query: 313 -DFRFPQI----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
D RF I W + H + PEA+D +LL+Y R TA EA HP+F
Sbjct: 264 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 147/300 (49%), Gaps = 27/300 (9%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ--LMRLMDHPNVISL 135
Y R +G G + VF+A + E V +K + ++ K + L L PN+I+L
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITL 97
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
S+ LV E+V T ++ L Q + ++ Y Y+I + L Y H
Sbjct: 98 ADIVKDPVSRTPA---LVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILKALDYCH 148
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
++ G+ HRDVKP N+++D +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 149 SM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 256 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT-- 312
Y S+D+WS GC+LA ++ +P F G + DQLV I KVLGT E++ Y
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIE 264
Query: 313 -DFRFPQI----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
D RF I W + H + PEA+D +LL+Y R TA EA HP+F
Sbjct: 265 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 147/300 (49%), Gaps = 27/300 (9%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ--LMRLMDHPNVISL 135
Y R +G G + VF+A + E V +K + ++ K + L L PN+I+L
Sbjct: 36 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITL 95
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
S+ LV E+V T ++ L Q + ++ Y Y+I + L Y H
Sbjct: 96 ADIVKDPVSRTPA---LVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILKALDYCH 146
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
++ G+ HRDVKP N+++D +++L D+G A+ G+ + SRY++ PEL+
Sbjct: 147 SM-GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 205
Query: 256 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT-- 312
Y S+D+WS GC+LA ++ +P F G + DQLV I KVLGT E++ Y
Sbjct: 206 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT---EDLYDYIDKYNIE 262
Query: 313 -DFRFPQI----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
D RF I W + H + PEA+D +LL+Y R TA EA HP+F
Sbjct: 263 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 322
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 146/301 (48%), Gaps = 29/301 (9%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGE--TVAIKKVLQDRRYKNRELQLMRLMDHPNVISL 135
Y R +G G + VF+A + E V I K ++ ++ K L L N+I L
Sbjct: 39 DYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREVKILENLRGGTNIIKL 98
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
SK LV EY+ T ++ L Q + ++ Y Y++ + L Y H
Sbjct: 99 IDTVKDPVSKTPA---LVFEYINNTDFKQLY------QILTDFDIRFYMYELLKALDYCH 149
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
+ G+ HRDVKP N+++D +++L D+G A+ + + SRY++ PEL+
Sbjct: 150 S-KGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQ 208
Query: 256 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRC-------- 306
Y S+D+WS GC+LA ++ +P F G++ DQLV I KVLGT EE+
Sbjct: 209 MYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT---EELYGYLKKYHID 265
Query: 307 MNPNYTDFRFPQIKAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
++P++ D Q W H + PEA+DL +LL+Y R TA EA HP+
Sbjct: 266 LDPHFNDI-LGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPY 324
Query: 363 F 363
F
Sbjct: 325 F 325
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 146/301 (48%), Gaps = 29/301 (9%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGE--TVAIKKVLQDRRYKNRELQLMRLMDHPNVISL 135
Y R +G G + VF+A + E V I K ++ ++ K L L N+I L
Sbjct: 44 DYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREVKILENLRGGTNIIKL 103
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
SK LV EY+ T ++ L Q + ++ Y Y++ + L Y H
Sbjct: 104 IDTVKDPVSKTPA---LVFEYINNTDFKQLY------QILTDFDIRFYMYELLKALDYCH 154
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
+ G+ HRDVKP N+++D +++L D+G A+ + + SRY++ PEL+
Sbjct: 155 S-KGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQ 213
Query: 256 EYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRC-------- 306
Y S+D+WS GC+LA ++ +P F G++ DQLV I KVLGT EE+
Sbjct: 214 MYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT---EELYGYLKKYHID 270
Query: 307 MNPNYTDFRFPQIKAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
++P++ D Q W H + PEA+DL +LL+Y R TA EA HP+
Sbjct: 271 LDPHFNDI-LGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPY 329
Query: 363 F 363
F
Sbjct: 330 F 330
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 175/400 (43%), Gaps = 84/400 (21%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ------DRRYKNRELQLMRLMDHPNV 132
Y ++GTGS+G V +A VAIKK+L+ D + RE+ ++ ++H +V
Sbjct: 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHV 114
Query: 133 ISLKHCFFSTTSK--DELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRG 190
+ + + DEL++ V+E ++ + + + +++K Y + G
Sbjct: 115 VKVLDIVIPKDVEKFDELYV--VLEIADSDFKKLFRTPVYLTE----LHIKTLLYNLLVG 168
Query: 191 LAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS------------ 238
+ Y+H+ G+ HRD+KP N LV+ VK+CDFG A+ + E S
Sbjct: 169 VKYVHSA-GILHRDLKPANCLVNQDC-SVKVCDFGLARTVDYPENGNSQLPISPREDDMN 226
Query: 239 ----------------YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL------- 275
++ +R+YRAPELI YT +ID+WS GC+ AELL
Sbjct: 227 LVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVA 286
Query: 276 ----GQPLFPGENAV--------------------DQLVEIIKVLGTPTREEIRCMNPNY 311
PLFPG + DQL I +LGTP+ E+I +
Sbjct: 287 YHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKED 346
Query: 312 TDFRFPQIKAHPWHKVFHKRMP---PEAIDLASRLLQYSPSLRCTALEACAHPFFDELR- 367
R+ +I +R P +AI L R+L ++P+ R T E AHPFF E+R
Sbjct: 347 AK-RYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRI 405
Query: 368 ---EPNARLPNGRPFPPLFNFKQ-ELAGASPELINRLIPE 403
E NA PF N + +L A + I R PE
Sbjct: 406 AEVETNATEKVRLPFNDWMNMDEPQLRYAFVKEIQRYHPE 445
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 147/295 (49%), Gaps = 40/295 (13%)
Query: 119 RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHY--SSMNQR-- 174
RE+ L+R + HPNVISL+ F S + + L+ +Y ++ ++K + S N++
Sbjct: 67 REIALLRELKHPNVISLQKVFLSHADRK---VWLLFDYAEHDLWHIIKFHRASKANKKPV 123
Query: 175 -MPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLV---DPLTHQVKLCDFGSAKVL 230
+P VK YQI G+ Y+H V HRD+KP N+LV P +VK+ D G A++
Sbjct: 124 QLPRGMVKSLLYQILDGIHYLH-ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 182
Query: 231 ---VKGEANIS-YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV 286
+K A++ + + +YRAPEL+ GA YT +IDIW+ GC+ AELL +P+F
Sbjct: 183 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQED 242
Query: 287 ---------DQLVEIIKVLGTPTR---EEIRCMNPNYT---DFRFPQ------IKAHPWH 325
DQL I V+G P E+I+ M + T DFR IK H
Sbjct: 243 IKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKH 302
Query: 326 KVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPFP 380
KV + +A L +LL P R T+ +A P+F E P + + G P
Sbjct: 303 KV---KPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPTSDVFAGCQIP 354
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 143/292 (48%), Gaps = 24/292 (8%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN----------RELQLMRLMD---HPN 131
+G G++G V++A+ +G VA+K V R N RE+ L+R ++ HPN
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 132 VISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGL 191
V+ L ++ + E+ + LV E+V + + L +P +K Q RGL
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKDLMRQFLRGL 125
Query: 192 AYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELI 251
++H + HRD+KP+N+LV VKL DFG A++ A + + +YRAPE++
Sbjct: 126 DFLHAN-CIVHRDLKPENILVTS-GGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVL 183
Query: 252 FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 311
+T Y T +D+WS GC+ AE+ +PLF G + DQL +I ++G P E+ + +
Sbjct: 184 LQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP-EDDWPRDVSL 241
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
FP P V + M L +L ++P R +A A H +
Sbjct: 242 PRGAFPPRGPRPVQSVVPE-MEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 143/292 (48%), Gaps = 24/292 (8%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN----------RELQLMRLMD---HPN 131
+G G++G V++A+ +G VA+K V R N RE+ L+R ++ HPN
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 132 VISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGL 191
V+ L ++ + E+ + LV E+V + + L +P +K Q RGL
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKDLMRQFLRGL 125
Query: 192 AYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELI 251
++H + HRD+KP+N+LV VKL DFG A++ A + + +YRAPE++
Sbjct: 126 DFLHAN-CIVHRDLKPENILVTS-GGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVL 183
Query: 252 FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 311
+T Y T +D+WS GC+ AE+ +PLF G + DQL +I ++G P E+ + +
Sbjct: 184 LQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP-EDDWPRDVSL 241
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
FP P V + M L +L ++P R +A A H +
Sbjct: 242 PRGAFPPRGPRPVQSVVPE-MEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 143/292 (48%), Gaps = 24/292 (8%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN----------RELQLMRLMD---HPN 131
+G G++G V++A+ +G VA+K V R N RE+ L+R ++ HPN
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 132 VISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGL 191
V+ L ++ + E+ + LV E+V + + L +P +K Q RGL
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKDLMRQFLRGL 125
Query: 192 AYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELI 251
++H + HRD+KP+N+LV VKL DFG A++ A + + +YRAPE++
Sbjct: 126 DFLHAN-CIVHRDLKPENILVTS-GGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVL 183
Query: 252 FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 311
+T Y T +D+WS GC+ AE+ +PLF G + DQL +I ++G P E+ + +
Sbjct: 184 LQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP-EDDWPRDVSL 241
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
FP P V + M L +L ++P R +A A H +
Sbjct: 242 PRGAFPPRGPRPVQSVVPE-MEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 164/333 (49%), Gaps = 53/333 (15%)
Query: 73 PKQTISYMAE--RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDH- 129
P ++Y E +V+G GSFG V +A + + VA+K V ++R+ + + +R+++H
Sbjct: 91 PHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHL 150
Query: 130 -----PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYT 184
N +++ H + T ++ + + E + +Y ++K +PL V+ +
Sbjct: 151 RKQDKDNTMNVIHMLENFTFRNHICMTF--ELLSMNLYELIKKNKFQGFSLPL--VRKFA 206
Query: 185 YQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQ-VKLCDFGSAKVLVKGEANISYICSR 243
+ I + L +H + H D+KP+N+L+ +K+ DFGS+ + + + I SR
Sbjct: 207 HSILQCLDALHK-NRIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYTXIQSR 263
Query: 244 YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 303
+YRAPE+I GA Y ID+WS GC+LAELL G PL PGE+ DQL +I++LG P++
Sbjct: 264 FYRAPEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ-- 320
Query: 304 IRCMNPNYTDFRFPQIKAHPWH------------------KVFHKRMPPEA--------- 336
+ ++ + F K +P + + R PPE+
Sbjct: 321 -KLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKG 379
Query: 337 ------IDLASRLLQYSPSLRCTALEACAHPFF 363
+D + L++ P++R T +A HP+
Sbjct: 380 CDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 166/356 (46%), Gaps = 77/356 (21%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPN 131
+Y+ + ++G GS+G V+ A T + VAIKKV L D + RE+ ++ +
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 86
Query: 132 VISLKHCFF--STTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
+I L DEL++ V+E + ++ K + + ++K Y +
Sbjct: 87 IIRLYDLIIPDDLLKFDELYI--VLEIADSDLKKLFKTPIFLTEE----HIKTILYNLLL 140
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANI----------- 237
G +IH G+ HRD+KP N L++ VK+CDFG A+ + + + NI
Sbjct: 141 GENFIHE-SGIIHRDLKPANCLLNQ-DCSVKVCDFGLARTINSEKDTNIVNDLEENEEPG 198
Query: 238 -----------SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQ-------- 277
S++ +R+YRAPELI YT SIDIWS GC+ AELL + Q
Sbjct: 199 PHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTN 258
Query: 278 --PLFPGENAV-----------------DQLVEIIKVLGTPTREEIRCMN-PNYTDFRFP 317
PLFPG + DQL I ++GTPT ++++ +N P +
Sbjct: 259 RFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKY--- 315
Query: 318 QIKAHPWHKVFHKR-----MPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 368
IK P K + + + + I+L +L+++P+ R T +A HP+ ++R+
Sbjct: 316 -IKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRK 370
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 164/333 (49%), Gaps = 53/333 (15%)
Query: 73 PKQTISYMAE--RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDH- 129
P ++Y E +V+G GSFG V +A + + VA+K V ++R+ + + +R+++H
Sbjct: 91 PHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHL 150
Query: 130 -----PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYT 184
N +++ H + T ++ + + E + +Y ++K +PL V+ +
Sbjct: 151 RKQDKDNTMNVIHMLENFTFRNHICMTF--ELLSMNLYELIKKNKFQGFSLPL--VRKFA 206
Query: 185 YQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQ-VKLCDFGSAKVLVKGEANISYICSR 243
+ I + L +H + H D+KP+N+L+ +K+ DFGS+ + + + I SR
Sbjct: 207 HSILQCLDALHK-NRIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYTXIQSR 263
Query: 244 YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 303
+YRAPE+I GA Y ID+WS GC+LAELL G PL PGE+ DQL +I++LG P++
Sbjct: 264 FYRAPEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ-- 320
Query: 304 IRCMNPNYTDFRFPQIKAHPWH------------------KVFHKRMPPEA--------- 336
+ ++ + F K +P + + R PPE+
Sbjct: 321 -KLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKG 379
Query: 337 ------IDLASRLLQYSPSLRCTALEACAHPFF 363
+D + L++ P++R T +A HP+
Sbjct: 380 CDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 158/360 (43%), Gaps = 78/360 (21%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPN 131
+Y + ++G GS+G V+ A + VAIKKV L D + RE+ ++ +
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 88
Query: 132 VISLKHCFF--STTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
+I L DEL++ V+E + ++ K + ++ +VK Y +
Sbjct: 89 IIRLHDLIIPEDLLKFDELYI--VLEIADSDLKKLFKTPIFLTEQ----HVKTILYNLLL 142
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI------------ 237
G +IH G+ HRD+KP N L++ VK+CDFG A+ + + +I
Sbjct: 143 GEKFIHE-SGIIHRDLKPANCLLNQ-DCSVKICDFGLART-INSDKDIHIVNDLEEKEEN 199
Query: 238 ---------------SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ----- 277
S++ +R+YRAPELI YT SIDIWS GC+ AELL
Sbjct: 200 EEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHIN 259
Query: 278 ------PLFPGENAV-----------------DQLVEIIKVLGTPTREEIRCMNPN---- 310
PLFPG + DQL I V+GTP E+++C+
Sbjct: 260 NPTNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIK 319
Query: 311 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPN 370
Y FP K + + E IDL +L+++ R T +A +HP+ ++R+ N
Sbjct: 320 YIKL-FPTRDGIDLSKKY-SSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKDVRKEN 377
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 143/295 (48%), Gaps = 27/295 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------------RELQLMRLMD--- 128
+G G++G V++A+ +G VA+K V R N RE+ L+R ++
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGGGGGGGLPISTVREVALLRRLEAFE 72
Query: 129 HPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIF 188
HPNV+ L ++ + E+ + LV E+V + + L +P +K Q
Sbjct: 73 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKDLMRQFL 130
Query: 189 RGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAP 248
RGL ++H + HRD+KP+N+LV VKL DFG A++ A + + +YRAP
Sbjct: 131 RGLDFLHAN-CIVHRDLKPENILVTS-GGTVKLADFGLARIYSYQMALTPVVVTLWYRAP 188
Query: 249 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 308
E++ +T Y T +D+WS GC+ AE+ +PLF G + DQL +I ++G P E+ +
Sbjct: 189 EVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP-EDDWPRD 246
Query: 309 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
+ FP P V + M L +L ++P R +A A H +
Sbjct: 247 VSLPRGAFPPRGPRPVQSVVPE-MEESGAQLLLEMLTFNPHKRISAFRALQHSYL 300
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 161/333 (48%), Gaps = 53/333 (15%)
Query: 73 PKQTISYMAE--RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDH- 129
P ++Y E +V+G G FG V +A + + VA+K V ++R+ + + +R+++H
Sbjct: 91 PHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHL 150
Query: 130 -----PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYT 184
N +++ H + T ++ + + E + +Y ++K +PL V+ +
Sbjct: 151 RKQDKDNTMNVIHMLENFTFRNHICMTF--ELLSMNLYELIKKNKFQGFSLPL--VRKFA 206
Query: 185 YQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQ-VKLCDFGSAKVLVKGEANISYICSR 243
+ I + L +H + H D+KP+N+L+ +K+ DFGS+ + + I SR
Sbjct: 207 HSILQCLDALHK-NRIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYXXIQSR 263
Query: 244 YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 303
+YRAPE+I GA Y ID+WS GC+LAELL G PL PGE+ DQL +I++LG P +
Sbjct: 264 FYRAPEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQ-- 320
Query: 304 IRCMNPNYTDFRFPQIKAHPWH------------------KVFHKRMPPEA--------- 336
+ ++ + F K +P + + R PPE+
Sbjct: 321 -KLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKG 379
Query: 337 ------IDLASRLLQYSPSLRCTALEACAHPFF 363
+D + L++ P++R T +A HP+
Sbjct: 380 CDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 137/296 (46%), Gaps = 49/296 (16%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y +RV+G GSFG V K TG+ A+K V+ R+ K RE+QL++ +DHP
Sbjct: 52 YKGQRVLGKGSFGEVILCKDKITGQECAVK-VISKRQVKQKTDKESLLREVQLLKQLDHP 110
Query: 131 NVISLKHCFFSTTSKDELFLNLVME-YVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N++ L F +D+ + LV E Y ++ + +R + Q+
Sbjct: 111 NIMKLYEFF-----EDKGYFYLVGEVYTGGELFDEIIS----RKRFSEVDAARIIRQVLS 161
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTH--QVKLCDFGSAKVLVKGEANISYICSRYYRA 247
G+ Y+H + HRD+KP+NLL++ + +++ DFG + + I + YY A
Sbjct: 162 GITYMHKNK-IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIA 220
Query: 248 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 307
PE++ G Y D+WS G +L LL G P F G N D L ++ K
Sbjct: 221 PEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK------------- 265
Query: 308 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
YT F PQ W KV A DL ++L Y PS+R +A +A H +
Sbjct: 266 -GKYT-FELPQ-----WKKV-----SESAKDLIRKMLTYVPSMRISARDALDHEWI 309
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 137/296 (46%), Gaps = 49/296 (16%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y +RV+G GSFG V K TG+ A+K V+ R+ K RE+QL++ +DHP
Sbjct: 51 YKGQRVLGKGSFGEVILCKDKITGQECAVK-VISKRQVKQKTDKESLLREVQLLKQLDHP 109
Query: 131 NVISLKHCFFSTTSKDELFLNLVME-YVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N++ L F +D+ + LV E Y ++ + +R + Q+
Sbjct: 110 NIMKLYEFF-----EDKGYFYLVGEVYTGGELFDEIIS----RKRFSEVDAARIIRQVLS 160
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANISYICSRYYRA 247
G+ Y+H + HRD+KP+NLL++ + +++ DFG + + I + YY A
Sbjct: 161 GITYMHKNK-IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIA 219
Query: 248 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 307
PE++ G Y D+WS G +L LL G P F G N D L ++ K
Sbjct: 220 PEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK------------- 264
Query: 308 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
YT F PQ W KV A DL ++L Y PS+R +A +A H +
Sbjct: 265 -GKYT-FELPQ-----WKKV-----SESAKDLIRKMLTYVPSMRISARDALDHEWI 308
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 164/359 (45%), Gaps = 53/359 (14%)
Query: 71 GEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY---KNRELQLM-RL 126
GEP + Y+ R +G G F V+ AK + VA+K V D+ Y E++L+ R+
Sbjct: 13 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRV 72
Query: 127 MDHPNV----ISLKHCF-----FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPL 177
D N + H F+ + + + +V E + E + ++K Y ++ +PL
Sbjct: 73 NDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYE--HRGIPL 130
Query: 178 IYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTH-----QVKLCDFGSAKVLVK 232
IYVK + Q+ GL Y+H G+ H D+KP+N+L++ + Q+K+ D G+A
Sbjct: 131 IYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CWY 188
Query: 233 GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF-PGENAV----- 286
E + I +R YR+PE++ GA + DIWS C++ EL+ G LF P E
Sbjct: 189 DEHYTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247
Query: 287 DQLVEIIKVLGTPTREEIRCMNPNYTDFRF---------PQIKAHPWHKV------FHKR 331
D + +II++LG +R N YT F ++K P V F K
Sbjct: 248 DHIAQIIELLGELPSYLLR--NGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKD 305
Query: 332 MPPEAIDLASRLLQYSPSLRCTALEACAHPFF------DELREPNARL-PNGRPFPPLF 383
E D S +LQ P R A HP+ +E+R P+ L +G P F
Sbjct: 306 EAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRVPDRELYGSGSDIPGWF 364
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 105/359 (29%), Positives = 164/359 (45%), Gaps = 53/359 (14%)
Query: 71 GEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY---KNRELQLM-RL 126
GEP + Y+ R +G G F V+ AK + VA+K V D+ Y E++L+ R+
Sbjct: 13 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRV 72
Query: 127 MDHPNV----ISLKHCF-----FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPL 177
D N + H F+ + + + +V E + E + ++K Y ++ +PL
Sbjct: 73 NDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYE--HRGIPL 130
Query: 178 IYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTH-----QVKLCDFGSAKVLVK 232
IYVK + Q+ GL Y+H G+ H D+KP+N+L++ + Q+K+ D G+A
Sbjct: 131 IYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA--CWY 188
Query: 233 GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF-PGENAV----- 286
E + I +R YR+PE++ GA + DIWS C++ EL+ G LF P E
Sbjct: 189 DEHYTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247
Query: 287 DQLVEIIKVLGTPTREEIRCMNPNYTDFRF---------PQIKAHPWHKV------FHKR 331
D + +II++LG +R N YT F ++K P V F K
Sbjct: 248 DHIAQIIELLGELPSYLLR--NGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKD 305
Query: 332 MPPEAIDLASRLLQYSPSLRCTALEACAHPFF------DELREPNARL-PNGRPFPPLF 383
E D S +LQ P R A HP+ +E+R P+ L +G P F
Sbjct: 306 EAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRVPDRELYGSGSDIPGWF 364
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 130/242 (53%), Gaps = 22/242 (9%)
Query: 69 KNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR---ELQLMR 125
KNGE K Y + ++G GSFG V +A E VAIK + + + N+ E++L+
Sbjct: 28 KNGE-KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE 86
Query: 126 LMDHPN------VISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIY 179
LM+ + ++ LK F L LV E + +Y +L++ + + L
Sbjct: 87 LMNKHDTEMKYYIVHLKRHFMFRNH-----LCLVFEMLSYNLYDLLRNTNFRGVSLNL-- 139
Query: 180 VKLYTYQIFRGLAYIHTVP-GVCHRDVKPQN-LLVDPLTHQVKLCDFGSAKVLVKGEANI 237
+ + Q+ L ++ T + H D+KP+N LL +P +K+ DFGS+ L G+
Sbjct: 140 TRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIY 197
Query: 238 SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG 297
I SR+YR+PE++ G Y +ID+WS GC+L E+ G+PLF G N VDQ+ +I++VLG
Sbjct: 198 QXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLG 256
Query: 298 TP 299
P
Sbjct: 257 IP 258
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 130/242 (53%), Gaps = 22/242 (9%)
Query: 69 KNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR---ELQLMR 125
KNGE K Y + ++G GSFG V +A E VAIK + + + N+ E++L+
Sbjct: 47 KNGE-KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE 105
Query: 126 LMDHPN------VISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIY 179
LM+ + ++ LK F L LV E + +Y +L++ + + L
Sbjct: 106 LMNKHDTEMKYYIVHLKRHFMFRNH-----LCLVFEMLSYNLYDLLRNTNFRGVSLNL-- 158
Query: 180 VKLYTYQIFRGLAYIHTVP-GVCHRDVKPQN-LLVDPLTHQVKLCDFGSAKVLVKGEANI 237
+ + Q+ L ++ T + H D+KP+N LL +P +K+ DFGS+ L G+
Sbjct: 159 TRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQL--GQRIY 216
Query: 238 SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG 297
I SR+YR+PE++ G Y +ID+WS GC+L E+ G+PLF G N VDQ+ +I++VLG
Sbjct: 217 QXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLG 275
Query: 298 TP 299
P
Sbjct: 276 IP 277
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 137/295 (46%), Gaps = 49/295 (16%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y +RV+G GSFG V K TG+ A+K V+ R+ K RE+QL++ +DHP
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVK-VISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 131 NVISLKHCFFSTTSKDELFLNLVME-YVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N++ L F +D+ + LV E Y ++ + +R + Q+
Sbjct: 87 NIMKLYEFF-----EDKGYFYLVGEVYTGGELFDEIIS----RKRFSEVDAARIIRQVLS 137
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANISYICSRYYRA 247
G+ Y+H + HRD+KP+NLL++ + +++ DFG + + I + YY A
Sbjct: 138 GITYMHK-NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIA 196
Query: 248 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 307
PE++ G Y D+WS G +L LL G P F G N D L ++ K
Sbjct: 197 PEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK------------- 241
Query: 308 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
YT F PQ W KV A DL ++L Y PS+R +A +A H +
Sbjct: 242 -GKYT-FELPQ-----WKKV-----SESAKDLIRKMLTYVPSMRISARDALDHEW 284
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 148/299 (49%), Gaps = 28/299 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G+FG VF+A+ +TG+ VA+KKVL + + RE+++++L+ H NV++L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 139 FFSTTS-----KDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
+ S K ++L V ++ + +L S++ + L +K + GL Y
Sbjct: 86 CRTKASPYNRCKGSIYL--VFDFCEHDLAGLL---SNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV--LVKGEANISY---ICSRYYRAP 248
IH + HRD+K N+L+ +KL DFG A+ L K Y + + +YR P
Sbjct: 141 IHR-NKILHRDMKAANVLI-TRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 249 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 308
EL+ G +Y ID+W AGC++AE+ P+ G QL I ++ G+ T E ++
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 258
Query: 309 PNYTDFRFPQIKAHPWHKVFHKRMP----PEAIDLASRLLQYSPSLRCTALEACAHPFF 363
NY + ++ KV + P A+DL +LL P+ R + +A H FF
Sbjct: 259 -NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 148/297 (49%), Gaps = 24/297 (8%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G+FG VF+A+ +TG+ VA+KKVL + + RE+++++L+ H NV++L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 139 FFSTTS---KDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
+ S + + + LV ++ + +L S++ + L +K + GL YIH
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLL---SNVLVKFTLSEIKRVMQMLLNGLYYIH 142
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV--LVKGEANISY---ICSRYYRAPEL 250
+ HRD+K N+L+ +KL DFG A+ L K Y + + +YR PEL
Sbjct: 143 R-NKILHRDMKAANVLITR-DGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPEL 200
Query: 251 IFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 310
+ G +Y ID+W AGC++AE+ P+ G QL I ++ G+ T E ++ N
Sbjct: 201 LLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD-N 259
Query: 311 YTDFRFPQIKAHPWHKVFHKRMP----PEAIDLASRLLQYSPSLRCTALEACAHPFF 363
Y + ++ KV + P A+DL +LL P+ R + +A H FF
Sbjct: 260 YELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 130/242 (53%), Gaps = 22/242 (9%)
Query: 69 KNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR---ELQLMR 125
KNGE K Y + ++G GSFG V +A E VAIK + + + N+ E++L+
Sbjct: 47 KNGE-KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE 105
Query: 126 LMDHPN------VISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIY 179
LM+ + ++ LK F L LV E + +Y +L++ + + L
Sbjct: 106 LMNKHDTEMKYYIVHLKRHFMFRNH-----LCLVFEMLSYNLYDLLRNTNFRGVSLNL-- 158
Query: 180 VKLYTYQIFRGLAYIHTVP-GVCHRDVKPQN-LLVDPLTHQVKLCDFGSAKVLVKGEANI 237
+ + Q+ L ++ T + H D+KP+N LL +P +K+ DFGS+ L G+
Sbjct: 159 TRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQL--GQRIY 216
Query: 238 SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG 297
I SR+YR+PE++ G Y +ID+WS GC+L E+ G+PLF G N VDQ+ +I++VLG
Sbjct: 217 QXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLG 275
Query: 298 TP 299
P
Sbjct: 276 IP 277
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 148/299 (49%), Gaps = 28/299 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G+FG VF+A+ +TG+ VA+KKVL + + RE+++++L+ H NV++L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 139 FFSTTS-----KDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
+ S K ++L V ++ + +L S++ + L +K + GL Y
Sbjct: 85 CRTKASPYNRCKGSIYL--VFDFCEHDLAGLL---SNVLVKFTLSEIKRVMQMLLNGLYY 139
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV--LVKGEANISY---ICSRYYRAP 248
IH + HRD+K N+L+ +KL DFG A+ L K Y + + +YR P
Sbjct: 140 IHR-NKILHRDMKAANVLITR-DGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 197
Query: 249 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 308
EL+ G +Y ID+W AGC++AE+ P+ G QL I ++ G+ T E ++
Sbjct: 198 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 257
Query: 309 PNYTDFRFPQIKAHPWHKVFHKRMP----PEAIDLASRLLQYSPSLRCTALEACAHPFF 363
NY + ++ KV + P A+DL +LL P+ R + +A H FF
Sbjct: 258 -NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 315
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 148/299 (49%), Gaps = 28/299 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDHPNVISLKHC 138
+G G+FG VF+A+ +TG+ VA+KKVL + + RE+++++L+ H NV++L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 139 FFSTTS-----KDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
+ S K ++L V ++ + +L S++ + L +K + GL Y
Sbjct: 86 CRTKASPYNRCKGSIYL--VFDFCEHDLAGLL---SNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV--LVKGEANISY---ICSRYYRAP 248
IH + HRD+K N+L+ +KL DFG A+ L K Y + + +YR P
Sbjct: 141 IHR-NKILHRDMKAANVLI-TRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 249 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 308
EL+ G +Y ID+W AGC++AE+ P+ G QL I ++ G+ T E ++
Sbjct: 199 ELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVD 258
Query: 309 PNYTDFRFPQIKAHPWHKVFHKRMP----PEAIDLASRLLQYSPSLRCTALEACAHPFF 363
NY + ++ KV + P A+DL +LL P+ R + +A H FF
Sbjct: 259 -NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 137/295 (46%), Gaps = 49/295 (16%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y +RV+G GSFG V K TG+ A+K V+ R+ K RE+QL++ +DHP
Sbjct: 34 YKGQRVLGKGSFGEVILCKDKITGQECAVK-VISKRQVKQKTDKESLLREVQLLKQLDHP 92
Query: 131 NVISLKHCFFSTTSKDELFLNLVME-YVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N++ L F +D+ + LV E Y ++ + +R + Q+
Sbjct: 93 NIMKLYEFF-----EDKGYFYLVGEVYTGGELFDEI----ISRKRFSEVDAARIIRQVLS 143
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTH--QVKLCDFGSAKVLVKGEANISYICSRYYRA 247
G+ Y+H + HRD+KP+NLL++ + +++ DFG + + I + YY A
Sbjct: 144 GITYMHK-NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIA 202
Query: 248 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 307
PE++ G Y D+WS G +L LL G P F G N D L ++ K
Sbjct: 203 PEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK------------- 247
Query: 308 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
YT F PQ W KV A DL ++L Y PS+R +A +A H +
Sbjct: 248 -GKYT-FELPQ-----WKKV-----SESAKDLIRKMLTYVPSMRISARDALDHEW 290
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 133/295 (45%), Gaps = 49/295 (16%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y +RV+G GSFG V K TG+ A+K V+ R+ K RE+QL++ +DHP
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVK-VISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 131 NVISLKHCFFSTTSKDELFLNLVME-YVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
N+ L F +D+ + LV E Y ++ + +R + Q+
Sbjct: 87 NIXKLYEFF-----EDKGYFYLVGEVYTGGELFDEI----ISRKRFSEVDAARIIRQVLS 137
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANISYICSRYYRA 247
G+ Y H + HRD+KP+NLL++ + +++ DFG + + I + YY A
Sbjct: 138 GITYXHK-NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIA 196
Query: 248 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 307
PE++ G Y D+WS G +L LL G P F G N D L ++ K
Sbjct: 197 PEVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK------------- 241
Query: 308 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
YT F PQ W KV A DL + L Y PS R +A +A H +
Sbjct: 242 -GKYT-FELPQ-----WKKV-----SESAKDLIRKXLTYVPSXRISARDALDHEW 284
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 140/308 (45%), Gaps = 49/308 (15%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------RELQLMRLMDHPNVISLK 136
++G GSFG V + K T + A+K V+ KN RE++L++ +DHPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVK-VINKASAKNKDTSTILREVELLKKLDHPNIMKLF 87
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHT 196
++S F + Y ++ + ++ +K Q+F G+ Y+H
Sbjct: 88 EILEDSSS----FYIVGELYTGGELFDEIIKRKRFSEHDAARIIK----QVFSGITYMHK 139
Query: 197 VPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
+ HRD+KP+N+L++ +K+ DFG + + I + YY APE++ G
Sbjct: 140 -HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT 198
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
Y D+WSAG +L LL G P F G+N D I+K R Y F
Sbjct: 199 --YDEKCDVWSAGVILYILLSGTPPFYGKNEYD----ILK----------RVETGKYA-F 241
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLP 374
PQ W + +A DL ++L + PSLR TA + HP+ +++ ++ P
Sbjct: 242 DLPQ-----WRTI-----SDDAKDLIRKMLTFHPSLRITATQCLEHPW---IQKYSSETP 288
Query: 375 NGRPFPPL 382
P L
Sbjct: 289 TISDLPSL 296
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 145/306 (47%), Gaps = 60/306 (19%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 97
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L +F+ ++L+ L E + + ++ S ++ + YT +I L Y+
Sbjct: 98 L---YFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETC----TRFYTAEIVSALEYL 149
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV----KGEANISYICSRYYRAPEL 250
H G+ HRD+KP+N+L++ H +++ DFG+AKVL + AN S++ + Y +PEL
Sbjct: 150 HG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-SFVGTAQYVSPEL 206
Query: 251 IFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 310
+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 207 LTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--------------- 250
Query: 311 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFD 364
++ FP+ K F P+A DL +LL + R C +E AHPFF+
Sbjct: 251 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 296
Query: 365 ELREPN 370
+ N
Sbjct: 297 SVTWEN 302
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 131/288 (45%), Gaps = 46/288 (15%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------RELQLMRLMDHPNVISLK 136
++G GSFG V + K T + A+K V+ KN RE++L++ +DHPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVK-VINKASAKNKDTSTILREVELLKKLDHPNIMKL- 86
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHT 196
F F + Y ++ + ++ +K Q+F G+ Y+H
Sbjct: 87 ---FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK----QVFSGITYMHK 139
Query: 197 VPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
+ HRD+KP+N+L++ +K+ DFG + + I + YY APE++ G
Sbjct: 140 -HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT 198
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
Y D+WSAG +L LL G P F G+N D I+K R Y F
Sbjct: 199 --YDEKCDVWSAGVILYILLSGTPPFYGKNEYD----ILK----------RVETGKYA-F 241
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
PQ W + + +A DL ++L + PSLR TA + HP+
Sbjct: 242 DLPQ-----W-----RTISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 131/288 (45%), Gaps = 46/288 (15%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------RELQLMRLMDHPNVISLK 136
++G GSFG V + K T + A+K V+ KN RE++L++ +DHPN++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVK-VINKASAKNKDTSTILREVELLKKLDHPNIMKL- 86
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHT 196
F F + Y ++ + ++ +K Q+F G+ Y+H
Sbjct: 87 ---FEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK----QVFSGITYMHK 139
Query: 197 VPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
+ HRD+KP+N+L++ +K+ DFG + + I + YY APE++ G
Sbjct: 140 -HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT 198
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
Y D+WSAG +L LL G P F G+N D I+K R Y F
Sbjct: 199 --YDEKCDVWSAGVILYILLSGTPPFYGKNEYD----ILK----------RVETGKYA-F 241
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
PQ W + + +A DL ++L + PSLR TA + HP+
Sbjct: 242 DLPQ-----W-----RTISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 144/306 (47%), Gaps = 60/306 (19%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 93
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L +F+ ++L+ L E + + ++ S ++ + YT +I L Y+
Sbjct: 94 L---YFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETC----TRFYTAEIVSALEYL 145
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV----KGEANISYICSRYYRAPEL 250
H G+ HRD+KP+N+L++ H +++ DFG+AKVL + AN S++ + Y +PEL
Sbjct: 146 HG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-SFVGTAQYVSPEL 202
Query: 251 IFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 310
+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 203 LTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--------------- 246
Query: 311 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFD 364
++ FP+ + P+A DL +LL + R C +E AHPFF+
Sbjct: 247 --EYDFPE------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 292
Query: 365 ELREPN 370
+ N
Sbjct: 293 SVTWEN 298
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 143/306 (46%), Gaps = 60/306 (19%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 43 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 101
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L CF ++L+ L E + + ++ S ++ + YT +I L Y+
Sbjct: 102 LYFCF---QDDEKLYFGLSYAKNGELL-KYIRKIGSFDETC----TRFYTAEIVSALEYL 153
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV----KGEANISYICSRYYRAPEL 250
H G+ HRD+KP+N+L++ H +++ DFG+AKVL + AN ++ + Y +PEL
Sbjct: 154 HG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPEL 210
Query: 251 IFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 310
+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 211 LTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--------------- 254
Query: 311 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFD 364
++ FP+ K F P+A DL +LL + R C +E AHPFF+
Sbjct: 255 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 300
Query: 365 ELREPN 370
+ N
Sbjct: 301 SVTWEN 306
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 144/306 (47%), Gaps = 60/306 (19%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L +F+ ++L+ L E + + ++ S ++ + YT +I L Y+
Sbjct: 97 L---YFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETC----TRFYTAEIVSALEYL 148
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV----KGEANISYICSRYYRAPEL 250
H G+ HRD+KP+N+L++ H +++ DFG+AKVL + AN ++ + Y +PEL
Sbjct: 149 HG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPEL 205
Query: 251 IFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 310
+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 206 LTEKSAXKSS-DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL--------------- 249
Query: 311 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFD 364
++ FP+ K F P+A DL +LL + R C +E AHPFF+
Sbjct: 250 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
Query: 365 ELREPN 370
+ N
Sbjct: 296 SVTWEN 301
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 145/306 (47%), Gaps = 60/306 (19%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L +F+ ++L+ L E + + ++ S ++ + YT +I L Y+
Sbjct: 95 L---YFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETC----TRFYTAEIVSALEYL 146
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV----KGEANISYICSRYYRAPEL 250
H G+ HRD+KP+N+L++ H +++ DFG+AKVL + AN +++ + Y +PEL
Sbjct: 147 HG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-AFVGTAQYVSPEL 203
Query: 251 IFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 310
+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 204 LTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--------------- 247
Query: 311 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFD 364
++ FP+ K F P+A DL +LL + R C +E AHPFF+
Sbjct: 248 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
Query: 365 ELREPN 370
+ N
Sbjct: 294 SVTWEN 299
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 145/307 (47%), Gaps = 62/307 (20%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L +F+ ++L+ L Y + + ++ S ++ + YT +I L Y
Sbjct: 97 L---YFTFQDDEKLYFGL--SYAKNGCLLKYIRKIGSFDETC----TRFYTAEIVSALEY 147
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV----KGEANISYICSRYYRAPE 249
+H G+ HRD+KP+N+L++ H +++ DFG+AKVL + AN S++ + Y +PE
Sbjct: 148 LHG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-SFVGTAQYVSPE 204
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
L+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 205 LLTEKSASKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL-------------- 249
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFF 363
++ FP+ K F P+A DL +LL + R C +E AHPFF
Sbjct: 250 ---EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFF 294
Query: 364 DELREPN 370
+ + N
Sbjct: 295 ESVTWEN 301
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 144/306 (47%), Gaps = 60/306 (19%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L +F+ ++L+ L E + + ++ S ++ + YT +I L Y+
Sbjct: 97 L---YFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETC----TRFYTAEIVSALEYL 148
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV----KGEANISYICSRYYRAPEL 250
H G+ HRD+KP+N+L++ H +++ DFG+AKVL + AN ++ + Y +PEL
Sbjct: 149 HG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPEL 205
Query: 251 IFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 310
+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 206 LTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL--------------- 249
Query: 311 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFD 364
++ FP+ K F P+A DL +LL + R C +E AHPFF+
Sbjct: 250 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
Query: 365 ELREPN 370
+ N
Sbjct: 296 SVTWEN 301
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 144/306 (47%), Gaps = 60/306 (19%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 97
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L +F+ ++L+ L E + + ++ S ++ + YT +I L Y+
Sbjct: 98 L---YFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETC----TRFYTAEIVSALEYL 149
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV----KGEANISYICSRYYRAPEL 250
H G+ HRD+KP+N+L++ H +++ DFG+AKVL + AN ++ + Y +PEL
Sbjct: 150 HG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPEL 206
Query: 251 IFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 310
+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 207 LTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--------------- 250
Query: 311 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFD 364
++ FP+ K F P+A DL +LL + R C +E AHPFF+
Sbjct: 251 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 296
Query: 365 ELREPN 370
+ N
Sbjct: 297 SVTWEN 302
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 144/306 (47%), Gaps = 60/306 (19%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L +F+ ++L+ L E + + ++ S ++ + YT +I L Y+
Sbjct: 97 L---YFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETC----TRFYTAEIVSALEYL 148
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV----KGEANISYICSRYYRAPEL 250
H G+ HRD+KP+N+L++ H +++ DFG+AKVL + AN ++ + Y +PEL
Sbjct: 149 HG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPEL 205
Query: 251 IFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 310
+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 206 LTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--------------- 249
Query: 311 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFD 364
++ FP+ K F P+A DL +LL + R C +E AHPFF+
Sbjct: 250 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
Query: 365 ELREPN 370
+ N
Sbjct: 296 SVTWEN 301
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 144/306 (47%), Gaps = 60/306 (19%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L +F+ ++L+ L E + + ++ S ++ + YT +I L Y+
Sbjct: 95 L---YFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETC----TRFYTAEIVSALEYL 146
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV----KGEANISYICSRYYRAPEL 250
H G+ HRD+KP+N+L++ H +++ DFG+AKVL + AN ++ + Y +PEL
Sbjct: 147 HG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPEL 203
Query: 251 IFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 310
+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 204 LTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--------------- 247
Query: 311 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFD 364
++ FP+ K F P+A DL +LL + R C +E AHPFF+
Sbjct: 248 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
Query: 365 ELREPN 370
+ N
Sbjct: 294 SVTWEN 299
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 144/306 (47%), Gaps = 60/306 (19%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L +F+ ++L+ L E + + ++ S ++ + YT +I L Y+
Sbjct: 97 L---YFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETC----TRFYTAEIVSALEYL 148
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV----KGEANISYICSRYYRAPEL 250
H G+ HRD+KP+N+L++ H +++ DFG+AKVL + AN ++ + Y +PEL
Sbjct: 149 HG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPEL 205
Query: 251 IFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 310
+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 206 LTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--------------- 249
Query: 311 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFD 364
++ FP+ K F P+A DL +LL + R C +E AHPFF+
Sbjct: 250 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
Query: 365 ELREPN 370
+ N
Sbjct: 296 SVTWEN 301
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 144/306 (47%), Gaps = 60/306 (19%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L +F+ ++L+ L E + + ++ S ++ + YT +I L Y+
Sbjct: 95 L---YFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETC----TRFYTAEIVSALEYL 146
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV----KGEANISYICSRYYRAPEL 250
H G+ HRD+KP+N+L++ H +++ DFG+AKVL + AN ++ + Y +PEL
Sbjct: 147 HG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPEL 203
Query: 251 IFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 310
+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 204 LTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--------------- 247
Query: 311 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFD 364
++ FP+ K F P+A DL +LL + R C +E AHPFF+
Sbjct: 248 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
Query: 365 ELREPN 370
+ N
Sbjct: 294 SVTWEN 299
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 144/306 (47%), Gaps = 60/306 (19%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L +F+ ++L+ L E + + ++ S ++ + YT +I L Y+
Sbjct: 97 L---YFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETC----TRFYTAEIVSALEYL 148
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV----KGEANISYICSRYYRAPEL 250
H G+ HRD+KP+N+L++ H +++ DFG+AKVL + AN ++ + Y +PEL
Sbjct: 149 HG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPEL 205
Query: 251 IFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 310
+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 206 LTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--------------- 249
Query: 311 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFD 364
++ FP+ K F P+A DL +LL + R C +E AHPFF+
Sbjct: 250 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
Query: 365 ELREPN 370
+ N
Sbjct: 296 SVTWEN 301
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 143/306 (46%), Gaps = 60/306 (19%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 93
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L +F+ ++L+ L E + + ++ S ++ + YT +I L Y+
Sbjct: 94 L---YFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETC----TRFYTAEIVSALEYL 145
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV----KGEANISYICSRYYRAPEL 250
H G+ HRD+KP+N+L++ H +++ DFG+AKVL + AN ++ + Y +PEL
Sbjct: 146 HG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPEL 202
Query: 251 IFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 310
+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 203 LTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--------------- 246
Query: 311 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFD 364
++ FP+ + P+A DL +LL + R C +E AHPFF+
Sbjct: 247 --EYDFPE------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 292
Query: 365 ELREPN 370
+ N
Sbjct: 293 SVTWEN 298
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 143/306 (46%), Gaps = 60/306 (19%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 20 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 78
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L +F+ ++L+ L E + + ++ S ++ + YT +I L Y+
Sbjct: 79 L---YFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETC----TRFYTAEIVSALEYL 130
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV----KGEANISYICSRYYRAPEL 250
H G+ HRD+KP+N+L++ H +++ DFG+AKVL + AN ++ + Y +PEL
Sbjct: 131 HG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPEL 187
Query: 251 IFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 310
+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 188 LTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--------------- 231
Query: 311 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFD 364
++ FP+ + P+A DL +LL + R C +E AHPFF+
Sbjct: 232 --EYDFPE------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 277
Query: 365 ELREPN 370
+ N
Sbjct: 278 SVTWEN 283
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 144/306 (47%), Gaps = 60/306 (19%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 16 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 74
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L +F+ ++L+ L E + + ++ S ++ + YT +I L Y+
Sbjct: 75 L---YFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETC----TRFYTAEIVSALEYL 126
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV----KGEANISYICSRYYRAPEL 250
H G+ HRD+KP+N+L++ H +++ DFG+AKVL + AN ++ + Y +PEL
Sbjct: 127 HG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPEL 183
Query: 251 IFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 310
+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 184 LTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--------------- 227
Query: 311 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFD 364
++ FP+ K F P+A DL +LL + R C +E AHPFF+
Sbjct: 228 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 273
Query: 365 ELREPN 370
+ N
Sbjct: 274 SVTWEN 279
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 144/306 (47%), Gaps = 60/306 (19%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 15 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 73
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L +F+ ++L+ L E + + ++ S ++ + YT +I L Y+
Sbjct: 74 L---YFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETC----TRFYTAEIVSALEYL 125
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV----KGEANISYICSRYYRAPEL 250
H G+ HRD+KP+N+L++ H +++ DFG+AKVL + AN ++ + Y +PEL
Sbjct: 126 HG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPEL 182
Query: 251 IFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 310
+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 183 LTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--------------- 226
Query: 311 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFD 364
++ FP+ K F P+A DL +LL + R C +E AHPFF+
Sbjct: 227 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 272
Query: 365 ELREPN 370
+ N
Sbjct: 273 SVTWEN 278
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 144/306 (47%), Gaps = 60/306 (19%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 14 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 72
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L +F+ ++L+ L E + + ++ S ++ + YT +I L Y+
Sbjct: 73 L---YFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETC----TRFYTAEIVSALEYL 124
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV----KGEANISYICSRYYRAPEL 250
H G+ HRD+KP+N+L++ H +++ DFG+AKVL + AN ++ + Y +PEL
Sbjct: 125 HG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPEL 181
Query: 251 IFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 310
+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 182 LTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--------------- 225
Query: 311 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFD 364
++ FP+ K F P+A DL +LL + R C +E AHPFF+
Sbjct: 226 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 271
Query: 365 ELREPN 370
+ N
Sbjct: 272 SVTWEN 277
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 143/306 (46%), Gaps = 60/306 (19%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 13 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 71
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L +F+ ++L+ L E + + ++ S ++ + YT +I L Y+
Sbjct: 72 L---YFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETC----TRFYTAEIVSALEYL 123
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV----KGEANISYICSRYYRAPEL 250
H G+ HRD+KP+N+L++ H +++ DFG+AKVL + AN ++ + Y +PEL
Sbjct: 124 HG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPEL 180
Query: 251 IFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 310
+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 181 LTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--------------- 224
Query: 311 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFD 364
++ FP+ + P+A DL +LL + R C +E AHPFF+
Sbjct: 225 --EYDFPE------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 270
Query: 365 ELREPN 370
+ N
Sbjct: 271 SVTWEN 276
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 143/306 (46%), Gaps = 60/306 (19%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 36 KILGEGSFSTTVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L +F+ ++L+ L E + + ++ S ++ + YT +I L Y+
Sbjct: 95 L---YFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETC----TRFYTAEIVSALEYL 146
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV----KGEANISYICSRYYRAPEL 250
H G+ HRD+KP+N+L++ H +++ DFG+AKVL + AN ++ + Y +PEL
Sbjct: 147 HG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPEL 203
Query: 251 IFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 310
+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 204 LTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--------------- 247
Query: 311 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFD 364
++ FP+ K F P+A DL +LL + R C +E AHPFF+
Sbjct: 248 --EYDFPE-------KFF-----PKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
Query: 365 ELREPN 370
+ N
Sbjct: 294 SVTWEN 299
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 146/339 (43%), Gaps = 62/339 (18%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ--------LMRLMDH 129
++ +++G GSFG VF A+ +T + AIK + +D + +++ L +H
Sbjct: 18 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 77
Query: 130 PNVISLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQI 187
P L H F + +K+ LF VMEY+ + MY + + L Y +I
Sbjct: 78 P---FLTHMFCTFQTKENLFF--VMEYLNGGDLMYHI-----QSCHKFDLSRATFYAAEI 127
Query: 188 FRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYR 246
GL ++H+ G+ +RD+K N+L+D H +K+ DFG K + G+A + C Y
Sbjct: 128 ILGLQFLHS-KGIVYRDLKLDNILLDKDGH-IKIADFGMCKENMLGDAKTNXFCGTPDYI 185
Query: 247 APELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 306
APE++ G +Y S+D WS G +L E+L+GQ F G++ + IR
Sbjct: 186 APEILLG-QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF------------HSIRM 232
Query: 307 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTAL-EACAHPFFDE 365
NP Y + + EA DL +L P R + HP F E
Sbjct: 233 DNPFYP-----------------RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFRE 275
Query: 366 LR-EPNARLPNGRPFPPLF-------NFKQELAGASPEL 396
+ E R PF P NF +E P L
Sbjct: 276 INWEELERKEIDPPFRPKVKSPFDCSNFDKEFLNEKPRL 314
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 141/306 (46%), Gaps = 60/306 (19%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--------YKNRELQLMRLMDHPNVIS 134
+++G GSF V A+ L T AIK +L+ R Y RE +M +DHP +
Sbjct: 41 KILGEGSFSTVVLARELATSREYAIK-ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 99
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L +F+ ++L+ L E + + ++ S ++ + YT +I L Y+
Sbjct: 100 L---YFTFQDDEKLYFGLSYAKNGELL-KYIRKIGSFDETC----TRFYTAEIVSALEYL 151
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV----KGEANISYICSRYYRAPEL 250
H G+ HRD+KP+N+L++ H +++ DFG+AKVL + AN ++ + Y +PEL
Sbjct: 152 HG-KGIIHRDLKPENILLNEDMH-IQITDFGTAKVLSPESKQARAN-XFVGTAQYVSPEL 208
Query: 251 IFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 310
+ + +S D+W+ GC++ +L+ G P F N +IIK+
Sbjct: 209 LTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--------------- 252
Query: 311 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR--CTALEAC----AHPFFD 364
++ FP P+A DL +LL + R C +E AHPFF+
Sbjct: 253 --EYDFPAA------------FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 298
Query: 365 ELREPN 370
+ N
Sbjct: 299 SVTWEN 304
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 144/334 (43%), Gaps = 62/334 (18%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ--------LMRLMDHPNVIS 134
+++G GSFG VF A+ +T + AIK + +D + +++ L +HP
Sbjct: 24 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP---F 80
Query: 135 LKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
L H F + +K+ LF VMEY+ + MY + + L Y +I GL
Sbjct: 81 LTHMFCTFQTKENLFF--VMEYLNGGDLMYHI-----QSCHKFDLSRATFYAAEIILGLQ 133
Query: 193 YIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPELI 251
++H+ G+ +RD+K N+L+D H +K+ DFG K + G+A + C Y APE++
Sbjct: 134 FLHS-KGIVYRDLKLDNILLDKDGH-IKIADFGMCKENMLGDAKTNEFCGTPDYIAPEIL 191
Query: 252 FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 311
G +Y S+D WS G +L E+L+GQ F G++ + IR NP Y
Sbjct: 192 LG-QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF------------HSIRMDNPFY 238
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTAL-EACAHPFFDELR-EP 369
+ + EA DL +L P R + HP F E+ E
Sbjct: 239 P-----------------RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEE 281
Query: 370 NARLPNGRPFPPLF-------NFKQELAGASPEL 396
R PF P NF +E P L
Sbjct: 282 LERKEIDPPFRPKVKSPFDCSNFDKEFLNEKPRL 315
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 152/323 (47%), Gaps = 51/323 (15%)
Query: 73 PKQTISYMAERV--VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLM 124
K +S M +RV +G+G++G V + T AIK + + + E+ ++
Sbjct: 31 KKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVL 90
Query: 125 RLMDHPNVISLKHCFFSTTSKDELFLNLVME-YVPETMYRVLKHYSSMNQRMPLIYVKLY 183
+L+DHPN++ L + FF +D+ LVME Y ++ + H N+ + +K
Sbjct: 91 KLLDHPNIMKL-YDFF----EDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIK-- 143
Query: 184 TYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANISYIC 241
Q+ G+ Y+H + HRD+KP+NLL++ +K+ DFG + V + +
Sbjct: 144 --QVLSGVTYLHK-HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLG 200
Query: 242 SRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 301
+ YY APE++ +Y D+WS G +L LL G P F G+ DQ EI++
Sbjct: 201 TAYYIAPEVL--RKKYDEKCDVWSIGVILFILLAGYPPFGGQ--TDQ--EILR------- 247
Query: 302 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHP 361
+ YT F P+ W K + A DL ++LQ+ R +A +A HP
Sbjct: 248 ---KVEKGKYT-FDSPE-----W-----KNVSEGAKDLIKQMLQFDSQRRISAQQALEHP 293
Query: 362 FFDELREPNARLPNGRPFPPLFN 384
+ ++E ++ +G P L N
Sbjct: 294 W---IKEMCSKKESGIELPSLAN 313
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 122/254 (48%), Gaps = 29/254 (11%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKV----LQDRRYKN---RELQLMRLMDHP 130
++ E+ +G G F V++A CL G VA+KKV L D + + +E+ L++ ++HP
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
NVI F LN+V+E + R++KH+ + +P V Y Q+
Sbjct: 93 NVIKYYASFIEDNE-----LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCS 147
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAP 248
L ++H+ V HRD+KP N+ + T VKL D G + K A S + + YY +P
Sbjct: 148 ALEHMHS-RRVMHRDIKPANVFITA-TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSP 205
Query: 249 ELIFGATEYTTSIDIWSAGCVLAEL-LLGQPLFPGENAVDQLVEIIKVLGTP------TR 301
E I Y DIWS GC+L E+ L P + + + L + I+ P
Sbjct: 206 ERIH-ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYS 264
Query: 302 EEIR-----CMNPN 310
EE+R C+NP+
Sbjct: 265 EELRQLVNMCINPD 278
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 137/307 (44%), Gaps = 40/307 (13%)
Query: 65 TIGGKNGEPK-QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQL 123
+IG +N E K + + E +G G++G+V + + + +G+ +A+K++ R N + Q
Sbjct: 40 SIGNQNFEVKADDLEPIME--LGRGAYGVVEKMRHVPSGQIMAVKRI---RATVNSQEQK 94
Query: 124 MRLMDHPNVISLKHCFFSTTSKDELF----LNLVMEYVPETMYRVLKHYSSMNQRMPLIY 179
LMD + C F+ T LF + + ME + ++ + K Q +P
Sbjct: 95 RLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDI 154
Query: 180 VKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISY 239
+ I + L ++H+ V HRDVKP N+L++ L QVK+CDFG + LV A
Sbjct: 155 LGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINAL-GQVKMCDFGISGYLVDSVAKTID 213
Query: 240 ICSRYYRAPELI---FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 296
+ Y APE I Y+ DIWS G + EL + + FP ++
Sbjct: 214 AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR--FPYDS-----------W 260
Query: 297 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 356
GTP ++ Q+ P ++ + E +D S+ L+ + R T E
Sbjct: 261 GTPFQQ-------------LKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPE 307
Query: 357 ACAHPFF 363
HPFF
Sbjct: 308 LMQHPFF 314
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 22/221 (9%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------RELQLMRLMDHPNVISL 135
R +G GSFG V+ A+ + E VAIKK+ + N +E++ ++ + HPN I
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 119
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
+ C+ E LVMEY + +L+ + Q + + V T+ +GLAY+H
Sbjct: 120 RGCYLR-----EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAV---THGALQGLAYLH 171
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
+ + HRDVK N+L+ VKL DFGSA ++ ++ + Y+ APE+I
Sbjct: 172 S-HNMIHRDVKAGNILLSE-PGLVKLGDFGSASIMAPAN---XFVGTPYWMAPEVILAMD 226
Query: 256 E--YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIK 294
E Y +D+WS G EL +P NA+ L I +
Sbjct: 227 EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 267
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 108/221 (48%), Gaps = 22/221 (9%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------RELQLMRLMDHPNVISL 135
R +G GSFG V+ A+ + E VAIKK+ + N +E++ ++ + HPN I
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
+ C+ + LVMEY + +L+ + Q + + V T+ +GLAY+H
Sbjct: 81 RGCYLREHTA-----WLVMEYCLGSASDLLEVHKKPLQEVEIAAV---THGALQGLAYLH 132
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
+ + HRDVK N+L+ VKL DFGSA ++ ++ + Y+ APE+I
Sbjct: 133 S-HNMIHRDVKAGNILLSE-PGLVKLGDFGSASIMAPAN---XFVGTPYWMAPEVILAMD 187
Query: 256 E--YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIK 294
E Y +D+WS G EL +P NA+ L I +
Sbjct: 188 EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 228
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 12/203 (5%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQ-DRRYK---NRELQLMRLMDHPNVISLKHCF 139
V+G G++GIV+ + L +AIK++ + D RY + E+ L + + H N++ F
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
+ F+ + ME VP L + + YT QI GL Y+H
Sbjct: 89 -----SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ- 142
Query: 200 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK-GEANISYICSRYYRAPELI-FGATEY 257
+ HRD+K N+L++ + +K+ DFG++K L ++ + Y APE+I G Y
Sbjct: 143 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGY 202
Query: 258 TTSIDIWSAGCVLAELLLGQPLF 280
+ DIWS GC + E+ G+P F
Sbjct: 203 GKAADIWSLGCTIIEMATGKPPF 225
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 127/286 (44%), Gaps = 37/286 (12%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTS 144
+G G++G+V + + + +G+ +A+K++ R N + Q LMD + C F+ T
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRI---RATVNSQEQKRLLMDLDISMRTVDCPFTVTF 71
Query: 145 KDELF----LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGV 200
LF + + ME + ++ + K Q +P + I + L ++H+ V
Sbjct: 72 YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 131
Query: 201 CHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELI---FGATEY 257
HRDVKP N+L++ L QVK+CDFG + LV A + Y APE I Y
Sbjct: 132 IHRDVKPSNVLINALG-QVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGY 190
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFP 317
+ DIWS G + EL + + FP ++ GTP ++
Sbjct: 191 SVKSDIWSLGITMIELAILR--FPYDS-----------WGTPFQQ-------------LK 224
Query: 318 QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
Q+ P ++ + E +D S+ L+ + R T E HPFF
Sbjct: 225 QVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 270
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 137/307 (44%), Gaps = 48/307 (15%)
Query: 67 GGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKV----LQDRRYKNRELQ 122
G G+ Q Y E +G GS+G V A T A KK+ ++D +E++
Sbjct: 1 GSTKGDINQY--YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIE 58
Query: 123 LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYV 180
+M+ +DHPN+I L F +D + LVME E RV+ H + +
Sbjct: 59 IMKSLDHPNIIRLYETF-----EDNTDIYLVMELCTGGELFERVV-HKRVFRESDAARIM 112
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLL--VDPLTHQVKLCDFGSAKVLVKGEANIS 238
K + +AY H + V HRD+KP+N L D +KL DFG A G+ +
Sbjct: 113 K----DVLSAVAYCHKL-NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT 167
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
+ + YY +P+++ G Y D WSAG ++ LL G P F + +++I + GT
Sbjct: 168 KVGTPYYVSPQVLEGL--YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE--GT 223
Query: 299 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 358
F FP+ W V P+A L RLL SP R T+L+A
Sbjct: 224 ---------------FTFPE---KDWLNV-----SPQAESLIRRLLTKSPKQRITSLQAL 260
Query: 359 AHPFFDE 365
H +F++
Sbjct: 261 EHEWFEK 267
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/307 (29%), Positives = 137/307 (44%), Gaps = 48/307 (15%)
Query: 67 GGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKV----LQDRRYKNRELQ 122
G G+ Q Y E +G GS+G V A T A KK+ ++D +E++
Sbjct: 18 GSTKGDINQY--YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIE 75
Query: 123 LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYV 180
+M+ +DHPN+I L F +D + LVME E RV+ H + +
Sbjct: 76 IMKSLDHPNIIRLYETF-----EDNTDIYLVMELCTGGELFERVV-HKRVFRESDAARIM 129
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLL--VDPLTHQVKLCDFGSAKVLVKGEANIS 238
K + +AY H + V HRD+KP+N L D +KL DFG A G+ +
Sbjct: 130 K----DVLSAVAYCHKL-NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT 184
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT 298
+ + YY +P+++ G Y D WSAG ++ LL G P F + +++I + GT
Sbjct: 185 KVGTPYYVSPQVLEGL--YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE--GT 240
Query: 299 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 358
F FP+ W V P+A L RLL SP R T+L+A
Sbjct: 241 ---------------FTFPE---KDWLNV-----SPQAESLIRRLLTKSPKQRITSLQAL 277
Query: 359 AHPFFDE 365
H +F++
Sbjct: 278 EHEWFEK 284
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 12/203 (5%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQ-DRRYK---NRELQLMRLMDHPNVISLKHCF 139
V+G G++GIV+ + L +AIK++ + D RY + E+ L + + H N++ F
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
+ F+ + ME VP L + + YT QI GL Y+H
Sbjct: 75 -----SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ- 128
Query: 200 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK-GEANISYICSRYYRAPELI-FGATEY 257
+ HRD+K N+L++ + +K+ DFG++K L ++ + Y APE+I G Y
Sbjct: 129 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGY 188
Query: 258 TTSIDIWSAGCVLAELLLGQPLF 280
+ DIWS GC + E+ G+P F
Sbjct: 189 GKAADIWSLGCTIIEMATGKPPF 211
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 134/310 (43%), Gaps = 62/310 (20%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR-------- 119
GK GE SY R +G+G++G V K AIK + + + K R
Sbjct: 32 GKIGE-----SYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNI 86
Query: 120 ---------ELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVME-YVPETMYRVLKHYS 169
E+ L++ +DHPN+I L F +D+ + LV E Y ++ + +
Sbjct: 87 EKFHEEIYNEISLLKSLDHPNIIKLFDVF-----EDKKYFYLVTEFYEGGELFEQIINRH 141
Query: 170 SMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTH--QVKLCDFGSA 227
++ +K QI G+ Y+H + HRD+KP+N+L++ +K+ DFG +
Sbjct: 142 KFDECDAANIMK----QILSGICYLHK-HNIVHRDIKPENILLENKNSLLNIKIVDFGLS 196
Query: 228 KVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVD 287
K + + YY APE++ +Y D+WS G ++ LL G P F G+N D
Sbjct: 197 SFFSKDYKLRDRLGTAYYIAPEVL--KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD 254
Query: 288 QLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYS 347
+ ++ K Y DF + W K + EA +L +L Y
Sbjct: 255 IIKKVEK-------------GKYYFDF-------NDW-----KNISDEAKELIKLMLTYD 289
Query: 348 PSLRCTALEA 357
+ RCTA EA
Sbjct: 290 YNKRCTAEEA 299
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 130/288 (45%), Gaps = 50/288 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ + +A+K + + + K RE+++ + HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F +T + L++EY P T+YR L+ S +++ Y+ ++ L+Y
Sbjct: 74 YGYFHDSTR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H+ V HRD+KP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 125 HS-KKVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEGR 181
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+ +D+WS G + E L+G+P F D I +V +F
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRV-----------------EF 223
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
FP + A DL SRLL+++PS R E HP+
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 152/332 (45%), Gaps = 64/332 (19%)
Query: 85 VGTGSFGIVFQAKCLE---TGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFS 141
+G G+FG V + C++ G VA+K V RY +++++H N + F
Sbjct: 22 LGEGAFGKVVE--CIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTD-PNSTFR 78
Query: 142 TTSKDELF-----LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHT 196
E F + +V E + + Y +K + R+ +++ YQI + + ++H+
Sbjct: 79 CVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLD--HIRKMAYQICKSVNFLHS 136
Query: 197 VPGVCHRDVKPQNLL---------------------VDPLTHQVKLCDFGSAKVLVKGEA 235
+ H D+KP+N+L ++P +K+ DFGSA E
Sbjct: 137 -NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINP---DIKVVDFGSATY--DDEH 190
Query: 236 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV 295
+ + + +R+YRAPE+I A ++ D+WS GC+L E LG +FP ++ + L + ++
Sbjct: 191 HSTLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERI 249
Query: 296 LGTPTREEI------RCMNPNYTDF-------RFPQIKAHPWHK------VFHKRMPPEA 336
LG + I + + + D+ R+ P + V H+R+
Sbjct: 250 LGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERL---- 305
Query: 337 IDLASRLLQYSPSLRCTALEACAHPFFDELRE 368
DL ++L+Y P+ R T EA HPFFD L++
Sbjct: 306 FDLIQKMLEYDPAKRITLREALKHPFFDLLKK 337
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 117/227 (51%), Gaps = 24/227 (10%)
Query: 82 ERV--VGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVIS 134
ER+ +G G+ G+V + + +G +A K + + R RELQ++ + P ++
Sbjct: 19 ERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVG 78
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
F+S +++ ME++ ++ +VLK +R+P + + + RGLAY
Sbjct: 79 FYGAFYSDGE-----ISICMEHMDGGSLDQVLKEA----KRIPEEILGKVSIAVLRGLAY 129
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFG 253
+ + HRDVKP N+LV+ ++KLCDFG + L+ AN S++ +R Y APE + G
Sbjct: 130 LREKHQIMHRDVKPSNILVNS-RGEIKLCDFGVSGQLIDSMAN-SFVGTRSYMAPERLQG 187
Query: 254 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 300
T Y+ DIWS G L EL +G+ P +A E+ + G P
Sbjct: 188 -THYSVQSDIWSMGLSLVELAVGRYPIPPPDA----KELEAIFGRPV 229
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 130/289 (44%), Gaps = 50/289 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F T + L++EY P T+YR L+ S +++ Y+ ++ L+Y
Sbjct: 100 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 150
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H+ V HRD+KP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 151 HS-KRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 207
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+ +D+WS G + E L+G+P F + I +V +F
Sbjct: 208 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 249
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
FP + A DL SRLL+++PS R E HP+
Sbjct: 250 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 142/306 (46%), Gaps = 56/306 (18%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------------NRELQLMR 125
Y+ + +G+G+ G V A +T + VAIK ++ R++ E+++++
Sbjct: 18 YIMSKTLGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILK 76
Query: 126 LMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTY 185
++HP +I +K+ F ++ ++ L + E +V+ N+R+ KLY Y
Sbjct: 77 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFY 127
Query: 186 QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANI-SYICS 242
Q+ + Y+H G+ HRD+KP+N+L+ +K+ DFG +K+L GE ++ +C
Sbjct: 128 QMLLAVQYLHE-NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCG 184
Query: 243 R-YYRAPELIF--GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 299
Y APE++ G Y ++D WS G +L L G P F L
Sbjct: 185 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---------- 234
Query: 300 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 359
+++I N+ P++ W +V K A+DL +LL P R T EA
Sbjct: 235 -KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEALR 280
Query: 360 HPFFDE 365
HP+ +
Sbjct: 281 HPWLQD 286
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 142/306 (46%), Gaps = 56/306 (18%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------------NRELQLMR 125
Y+ + +G+G+ G V A +T + VAIK ++ R++ E+++++
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILK 70
Query: 126 LMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTY 185
++HP +I +K+ F ++ ++ L + E +V+ N+R+ KLY Y
Sbjct: 71 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFY 121
Query: 186 QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANI-SYICS 242
Q+ + Y+H G+ HRD+KP+N+L+ +K+ DFG +K+L GE ++ +C
Sbjct: 122 QMLLAVQYLHE-NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCG 178
Query: 243 R-YYRAPELIF--GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 299
Y APE++ G Y ++D WS G +L L G P F L
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---------- 228
Query: 300 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 359
+++I N+ P++ W +V K A+DL +LL P R T EA
Sbjct: 229 -KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEALR 274
Query: 360 HPFFDE 365
HP+ +
Sbjct: 275 HPWLQD 280
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 142/306 (46%), Gaps = 56/306 (18%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------------NRELQLMR 125
Y+ + +G+G+ G V A +T + VAIK ++ R++ E+++++
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILK 70
Query: 126 LMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTY 185
++HP +I +K+ F ++ ++ L + E +V+ N+R+ KLY Y
Sbjct: 71 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFY 121
Query: 186 QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANI-SYICS 242
Q+ + Y+H G+ HRD+KP+N+L+ +K+ DFG +K+L GE ++ +C
Sbjct: 122 QMLLAVQYLHE-NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCG 178
Query: 243 R-YYRAPELIF--GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 299
Y APE++ G Y ++D WS G +L L G P F L
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---------- 228
Query: 300 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 359
+++I N+ P++ W +V K A+DL +LL P R T EA
Sbjct: 229 -KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEALR 274
Query: 360 HPFFDE 365
HP+ +
Sbjct: 275 HPWLQD 280
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 142/306 (46%), Gaps = 56/306 (18%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------------NRELQLMR 125
Y+ + +G+G+ G V A +T + VAIK ++ R++ E+++++
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILK 70
Query: 126 LMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTY 185
++HP +I +K+ F ++ ++ L + E +V+ N+R+ KLY Y
Sbjct: 71 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFY 121
Query: 186 QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANI-SYICS 242
Q+ + Y+H G+ HRD+KP+N+L+ +K+ DFG +K+L GE ++ +C
Sbjct: 122 QMLLAVQYLHE-NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCG 178
Query: 243 R-YYRAPELIF--GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 299
Y APE++ G Y ++D WS G +L L G P F L
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---------- 228
Query: 300 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 359
+++I N+ P++ W +V K A+DL +LL P R T EA
Sbjct: 229 -KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEALR 274
Query: 360 HPFFDE 365
HP+ +
Sbjct: 275 HPWLQD 280
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 130/288 (45%), Gaps = 50/288 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 31 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 90
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F T + L++EY P T+YR L+ S +++ Y+ ++ L+Y
Sbjct: 91 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 141
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H+ V HRD+KP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 142 HS-KRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 198
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+ +D+WS G + E L+G+P F + I +V +F
Sbjct: 199 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 240
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
FP + A DL SRLL+++PS R E HP+
Sbjct: 241 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 276
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 142/306 (46%), Gaps = 56/306 (18%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------------NRELQLMR 125
Y+ + +G+G+ G V A +T + VAIK ++ R++ E+++++
Sbjct: 11 YIMSKTLGSGACGEVKLAFERKTCKKVAIK-IISKRKFAIGSAREADPALNVETEIEILK 69
Query: 126 LMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTY 185
++HP +I +K+ F ++ ++ L + E +V+ N+R+ KLY Y
Sbjct: 70 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFY 120
Query: 186 QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANI-SYICS 242
Q+ + Y+H G+ HRD+KP+N+L+ +K+ DFG +K+L GE ++ +C
Sbjct: 121 QMLLAVQYLHE-NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCG 177
Query: 243 R-YYRAPELIF--GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 299
Y APE++ G Y ++D WS G +L L G P F L
Sbjct: 178 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---------- 227
Query: 300 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 359
+++I N+ P++ W +V K A+DL +LL P R T EA
Sbjct: 228 -KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEALR 273
Query: 360 HPFFDE 365
HP+ +
Sbjct: 274 HPWLQD 279
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 115/228 (50%), Gaps = 20/228 (8%)
Query: 73 PKQTIS--YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR-----ELQLMR 125
P QT M ER+ GTG FG V + +TGE VAIK+ Q+ KNR E+Q+M+
Sbjct: 10 PTQTCGPWEMKERL-GTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMK 68
Query: 126 LMDHPNVISLKHC--FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIY--VK 181
++HPNV+S + + ++L L L MEY R K+ + L ++
Sbjct: 69 KLNHPNVVSAREVPDGLQKLAPNDLPL-LAMEYCEGGDLR--KYLNQFENCCGLKEGPIR 125
Query: 182 LYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQV--KLCDFGSAKVLVKGEANISY 239
I L Y+H + HRD+KP+N+++ P ++ K+ D G AK L +GE +
Sbjct: 126 TLLSDISSALRYLHE-NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEF 184
Query: 240 ICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLG-QPLFPGENAV 286
+ + Y APEL+ +YT ++D WS G + E + G +P P V
Sbjct: 185 VGTLQYLAPELL-EQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPV 231
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 115/228 (50%), Gaps = 20/228 (8%)
Query: 73 PKQTIS--YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR-----ELQLMR 125
P QT M ER+ GTG FG V + +TGE VAIK+ Q+ KNR E+Q+M+
Sbjct: 9 PTQTCGPWEMKERL-GTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMK 67
Query: 126 LMDHPNVISLKHC--FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIY--VK 181
++HPNV+S + + ++L L L MEY R K+ + L ++
Sbjct: 68 KLNHPNVVSAREVPDGLQKLAPNDLPL-LAMEYCEGGDLR--KYLNQFENCCGLKEGPIR 124
Query: 182 LYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQV--KLCDFGSAKVLVKGEANISY 239
I L Y+H + HRD+KP+N+++ P ++ K+ D G AK L +GE +
Sbjct: 125 TLLSDISSALRYLHE-NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEF 183
Query: 240 ICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLG-QPLFPGENAV 286
+ + Y APEL+ +YT ++D WS G + E + G +P P V
Sbjct: 184 VGTLQYLAPELL-EQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPV 230
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 130/288 (45%), Gaps = 50/288 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F T + L++EY P T+YR L+ S +++ Y+ ++ L+Y
Sbjct: 79 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 129
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H+ V HRD+KP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 130 HS-KRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 186
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+ +D+WS G + E L+G+P F + I +V +F
Sbjct: 187 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 228
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
FP + A DL SRLL+++PS R E HP+
Sbjct: 229 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 151/332 (45%), Gaps = 64/332 (19%)
Query: 85 VGTGSFGIVFQAKCLE---TGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFS 141
+G G+FG V + C++ G VA+K V RY +++++H N + F
Sbjct: 22 LGEGAFGKVVE--CIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTD-PNSTFR 78
Query: 142 TTSKDELF-----LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHT 196
E F + +V E + + Y +K + R+ +++ YQI + + ++H+
Sbjct: 79 CVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLD--HIRKMAYQICKSVNFLHS 136
Query: 197 VPGVCHRDVKPQNLL---------------------VDPLTHQVKLCDFGSAKVLVKGEA 235
+ H D+KP+N+L ++P +K+ DFGSA E
Sbjct: 137 -NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINP---DIKVVDFGSATY--DDEH 190
Query: 236 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV 295
+ + + R+YRAPE+I A ++ D+WS GC+L E LG +FP ++ + L + ++
Sbjct: 191 HSTLVXXRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERI 249
Query: 296 LGTPTREEI------RCMNPNYTDF-------RFPQIKAHPWHK------VFHKRMPPEA 336
LG + I + + + D+ R+ P + V H+R+
Sbjct: 250 LGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERL---- 305
Query: 337 IDLASRLLQYSPSLRCTALEACAHPFFDELRE 368
DL ++L+Y P+ R T EA HPFFD L++
Sbjct: 306 FDLIQKMLEYDPAKRITLREALKHPFFDLLKK 337
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 130/288 (45%), Gaps = 50/288 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F T + L++EY P T+YR L+ S +++ Y+ ++ L+Y
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 127
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H+ V HRD+KP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 128 HS-KRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 184
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+ +D+WS G + E L+G+P F + I +V +F
Sbjct: 185 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 226
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
FP + A DL SRLL+++PS R E HP+
Sbjct: 227 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 130/288 (45%), Gaps = 50/288 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 13 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 72
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F T + L++EY P T+YR L+ S +++ Y+ ++ L+Y
Sbjct: 73 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 123
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H+ V HRD+KP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 124 HS-KRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 180
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+ +D+WS G + E L+G+P F + I +V +F
Sbjct: 181 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 222
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
FP + A DL SRLL+++PS R E HP+
Sbjct: 223 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 258
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 130/288 (45%), Gaps = 50/288 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 18 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F T + L++EY P T+YR L+ S +++ Y+ ++ L+Y
Sbjct: 78 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 128
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H+ V HRD+KP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 129 HS-KRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 185
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+ +D+WS G + E L+G+P F + I +V +F
Sbjct: 186 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 227
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
FP + A DL SRLL+++PS R E HP+
Sbjct: 228 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 263
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 130/288 (45%), Gaps = 50/288 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F T + L++EY P T+YR L+ S +++ Y+ ++ L+Y
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H+ V HRD+KP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 125 HS-KRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 181
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+ +D+WS G + E L+G+P F + I +V +F
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 223
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
FP + A DL SRLL+++PS R E HP+
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 130/288 (45%), Gaps = 50/288 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F T + L++EY P T+YR L+ S +++ Y+ ++ L+Y
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 127
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H+ V HRD+KP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 128 HS-KRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEGR 184
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+ +D+WS G + E L+G+P F + I +V +F
Sbjct: 185 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 226
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
FP + A DL SRLL+++PS R E HP+
Sbjct: 227 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 130/288 (45%), Gaps = 50/288 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F T + L++EY P T+YR L+ S +++ Y+ ++ L+Y
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 127
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H+ V HRD+KP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 128 HS-KRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 184
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+ +D+WS G + E L+G+P F + I +V +F
Sbjct: 185 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 226
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
FP + A DL SRLL+++PS R E HP+
Sbjct: 227 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 130/288 (45%), Gaps = 50/288 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F T + L++EY P T+YR L+ S +++ Y+ ++ L+Y
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H+ V HRD+KP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 125 HS-KRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEGR 181
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+ +D+WS G + E L+G+P F + I +V +F
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 223
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
FP + A DL SRLL+++PS R E HP+
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 129/288 (44%), Gaps = 50/288 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F T + L++EY P T+YR L+ S +++ Y+ ++ L+Y
Sbjct: 75 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 125
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H+ V HRD+KP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 126 HS-KRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGR 182
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+ +D+WS G + E L+G+P F + I +V +F
Sbjct: 183 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 224
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
FP + A DL SRLL+++PS R E HP+
Sbjct: 225 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 129/288 (44%), Gaps = 50/288 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F T + L++EY P T+YR L+ S +++ Y+ ++ L+Y
Sbjct: 79 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 129
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H+ V HRD+KP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 130 HS-KRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGR 186
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+ +D+WS G + E L+G+P F + I +V +F
Sbjct: 187 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 228
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
FP + A DL SRLL+++PS R E HP+
Sbjct: 229 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 129/288 (44%), Gaps = 50/288 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F T + L++EY P T+YR L+ S +++ Y+ ++ L+Y
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H+ V HRD+KP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 125 HS-KRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTELCGTLDYLPPEMIEGR 181
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+ +D+WS G + E L+G+P F + I +V +F
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 223
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
FP + A DL SRLL+++PS R E HP+
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 143/313 (45%), Gaps = 53/313 (16%)
Query: 71 GEPKQTISYMAERV-VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL-----QLM 124
G+P+ SY+ + +G GS GIV A +G+ VA+KK + R+ + REL +M
Sbjct: 20 GDPR---SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKK-MDLRKQQRRELLFNEVVIM 75
Query: 125 RLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYT 184
R H NV+ + + + DEL++ VME++ + ++ MN+ +
Sbjct: 76 RDYQHENVVEMYNSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAVC 126
Query: 185 YQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTH--QVKLCDFG-SAKVLVKGEANISYIC 241
+ + L+ +H GV HRD+K ++L LTH +VKL DFG A+V + +
Sbjct: 127 LAVLQALSVLHA-QGVIHRDIKSDSIL---LTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 182
Query: 242 SRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 301
+ Y+ APELI Y +DIWS G ++ E++ G+P + E P
Sbjct: 183 TPYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPL 226
Query: 302 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHP 361
+ ++ + N P K HK + P RLL P+ R TA E HP
Sbjct: 227 KAMKMIRDNLP----------PRLKNLHK-VSPSLKGFLDRLLVRDPAQRATAAELLKHP 275
Query: 362 FFDELREPNARLP 374
F + P + +P
Sbjct: 276 FLAKAGPPASIVP 288
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 143/313 (45%), Gaps = 53/313 (16%)
Query: 71 GEPKQTISYMAERV-VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL-----QLM 124
G+P+ SY+ + +G GS GIV A +G+ VA+KK + R+ + REL +M
Sbjct: 70 GDPR---SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKK-MDLRKQQRRELLFNEVVIM 125
Query: 125 RLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYT 184
R H NV+ + + + DEL++ VME++ + ++ MN+ +
Sbjct: 126 RDYQHENVVEMYNSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAVC 176
Query: 185 YQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTH--QVKLCDFG-SAKVLVKGEANISYIC 241
+ + L+ +H GV HRD+K ++L LTH +VKL DFG A+V + +
Sbjct: 177 LAVLQALSVLHA-QGVIHRDIKSDSIL---LTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 232
Query: 242 SRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 301
+ Y+ APELI Y +DIWS G ++ E++ G+P + E P
Sbjct: 233 TPYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPL 276
Query: 302 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHP 361
+ ++ + N P K HK + P RLL P+ R TA E HP
Sbjct: 277 KAMKMIRDNLP----------PRLKNLHK-VSPSLKGFLDRLLVRDPAQRATAAELLKHP 325
Query: 362 FFDELREPNARLP 374
F + P + +P
Sbjct: 326 FLAKAGPPASIVP 338
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 129/289 (44%), Gaps = 50/289 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F T + L++EY P T+YR L+ S +++ Y+ ++ L+Y
Sbjct: 100 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 150
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H+ V HRD+KP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 151 HS-KRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRDDLCGTLDYLPPEMIEGR 207
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+ +D+WS G + E L+G+P F + I +V +F
Sbjct: 208 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 249
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
FP + A DL SRLL+++PS R E HP+
Sbjct: 250 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 143/313 (45%), Gaps = 53/313 (16%)
Query: 71 GEPKQTISYMAERV-VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL-----QLM 124
G+P+ SY+ + +G GS GIV A +G+ VA+KK + R+ + REL +M
Sbjct: 16 GDPR---SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKK-MDLRKQQRRELLFNEVVIM 71
Query: 125 RLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYT 184
R H NV+ + + + DEL++ VME++ + ++ MN+ +
Sbjct: 72 RDYQHENVVEMYNSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAVC 122
Query: 185 YQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTH--QVKLCDFG-SAKVLVKGEANISYIC 241
+ + L+ +H GV HRD+K ++L LTH +VKL DFG A+V + +
Sbjct: 123 LAVLQALSVLHA-QGVIHRDIKSDSIL---LTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 178
Query: 242 SRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 301
+ Y+ APELI Y +DIWS G ++ E++ G+P + E P
Sbjct: 179 TPYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPL 222
Query: 302 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHP 361
+ ++ + N P K HK + P RLL P+ R TA E HP
Sbjct: 223 KAMKMIRDNLP----------PRLKNLHK-VSPSLKGFLDRLLVRDPAQRATAAELLKHP 271
Query: 362 FFDELREPNARLP 374
F + P + +P
Sbjct: 272 FLAKAGPPASIVP 284
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 143/313 (45%), Gaps = 53/313 (16%)
Query: 71 GEPKQTISYMAERV-VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL-----QLM 124
G+P+ SY+ + +G GS GIV A +G+ VA+KK + R+ + REL +M
Sbjct: 27 GDPR---SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKK-MDLRKQQRRELLFNEVVIM 82
Query: 125 RLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYT 184
R H NV+ + + + DEL++ VME++ + ++ MN+ +
Sbjct: 83 RDYQHENVVEMYNSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAVC 133
Query: 185 YQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTH--QVKLCDFG-SAKVLVKGEANISYIC 241
+ + L+ +H GV HRD+K ++L LTH +VKL DFG A+V + +
Sbjct: 134 LAVLQALSVLHA-QGVIHRDIKSDSIL---LTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 189
Query: 242 SRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 301
+ Y+ APELI Y +DIWS G ++ E++ G+P + E P
Sbjct: 190 TPYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPL 233
Query: 302 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHP 361
+ ++ + N P K HK + P RLL P+ R TA E HP
Sbjct: 234 KAMKMIRDNLP----------PRLKNLHK-VSPSLKGFLDRLLVRDPAQRATAAELLKHP 282
Query: 362 FFDELREPNARLP 374
F + P + +P
Sbjct: 283 FLAKAGPPASIVP 295
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 129/288 (44%), Gaps = 50/288 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F T + L++EY P T+YR L+ S +++ Y+ ++ L+Y
Sbjct: 78 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSRFDEQRTATYIT----ELANALSYC 128
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H+ V HRD+KP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 129 HS-KRVIHRDIKPENLLLGS-NGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 185
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+ +D+WS G + E L+G P F + I +V +F
Sbjct: 186 M-HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV-----------------EF 227
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
FP + A DL SRLL+++ S R T E HP+
Sbjct: 228 TFPDF------------VTEGARDLISRLLKHNASQRLTLAEVLEHPW 263
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 143/313 (45%), Gaps = 53/313 (16%)
Query: 71 GEPKQTISYMAERV-VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL-----QLM 124
G+P+ SY+ + +G GS GIV A +G+ VA+KK + R+ + REL +M
Sbjct: 25 GDPR---SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKK-MDLRKQQRRELLFNEVVIM 80
Query: 125 RLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYT 184
R H NV+ + + + DEL++ VME++ + ++ MN+ +
Sbjct: 81 RDYQHENVVEMYNSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAVC 131
Query: 185 YQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTH--QVKLCDFG-SAKVLVKGEANISYIC 241
+ + L+ +H GV HRD+K ++L LTH +VKL DFG A+V + +
Sbjct: 132 LAVLQALSVLHA-QGVIHRDIKSDSIL---LTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 187
Query: 242 SRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 301
+ Y+ APELI Y +DIWS G ++ E++ G+P + E P
Sbjct: 188 TPYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPL 231
Query: 302 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHP 361
+ ++ + N P K HK + P RLL P+ R TA E HP
Sbjct: 232 KAMKMIRDNLP----------PRLKNLHK-VSPSLKGFLDRLLVRDPAQRATAAELLKHP 280
Query: 362 FFDELREPNARLP 374
F + P + +P
Sbjct: 281 FLAKAGPPASIVP 293
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 143/313 (45%), Gaps = 53/313 (16%)
Query: 71 GEPKQTISYMAERV-VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL-----QLM 124
G+P+ SY+ + +G GS GIV A +G+ VA+KK + R+ + REL +M
Sbjct: 147 GDPR---SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKK-MDLRKQQRRELLFNEVVIM 202
Query: 125 RLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYT 184
R H NV+ + + + DEL++ VME++ + ++ MN+ +
Sbjct: 203 RDYQHENVVEMYNSYLVG---DELWV--VMEFLEGGALTDIVTHTRMNEEQ----IAAVC 253
Query: 185 YQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTH--QVKLCDFG-SAKVLVKGEANISYIC 241
+ + L+ +H GV HRD+K ++L LTH +VKL DFG A+V + +
Sbjct: 254 LAVLQALSVLHAQ-GVIHRDIKSDSIL---LTHDGRVKLSDFGFCAQVSKEVPRRKXLVG 309
Query: 242 SRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 301
+ Y+ APELI Y +DIWS G ++ E++ G+P + E P
Sbjct: 310 TPYWMAPELI-SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE---------------PPL 353
Query: 302 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHP 361
+ ++ + N P K HK + P RLL P+ R TA E HP
Sbjct: 354 KAMKMIRDNLP----------PRLKNLHK-VSPSLKGFLDRLLVRDPAQRATAAELLKHP 402
Query: 362 FFDELREPNARLP 374
F + P + +P
Sbjct: 403 FLAKAGPPASIVP 415
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 129/288 (44%), Gaps = 50/288 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F T + L++EY P T+YR L+ S +++ Y+ ++ L+Y
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H+ V HRD+KP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 125 HS-KRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGR 181
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+ +D+WS G + E L+G+P F + I +V +F
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 223
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
FP + A DL SRLL+++PS R E HP+
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 130/288 (45%), Gaps = 50/288 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F T + L++EY P T+YR L+ S +++ Y+ ++ L+Y
Sbjct: 75 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 125
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H+ V HRD+KP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 126 HS-KRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRDTLCGTLDYLPPEMIEGR 182
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+ +D+WS G + E L+G+P F + I +V +F
Sbjct: 183 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 224
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
FP + A DL SRLL+++PS R E HP+
Sbjct: 225 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 129/288 (44%), Gaps = 50/288 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F T + L++EY P T+YR L+ S +++ Y+ ++ L+Y
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H+ V HRD+KP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 125 HS-KRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGR 181
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+ +D+WS G + E L+G+P F + I +V +F
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 223
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
FP + A DL SRLL+++PS R E HP+
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 107/214 (50%), Gaps = 18/214 (8%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIK----KVLQDRRYKNR---ELQLMRLMDHP 130
+Y + +G GSFG V A TG+ VA+K KVL + R E+ +RL+ HP
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRG 190
++I L + SKDE+ + V+EY ++ + M+++ + + QI
Sbjct: 75 HIIKL---YDVIKSKDEIIM--VIEYAGNELFDYIVQRDKMSEQE----ARRFFQQIISA 125
Query: 191 LAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPEL 250
+ Y H + HRD+KP+NLL+D + VK+ DFG + ++ G + S Y APE+
Sbjct: 126 VEYCHR-HKIVHRDLKPENLLLDEHLN-VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 183
Query: 251 IFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 284
I G +D+WS G +L +L + F E+
Sbjct: 184 ISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 217
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 129/288 (44%), Gaps = 50/288 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F T + L++EY P T+YR L+ S +++ Y+ ++ L+Y
Sbjct: 79 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 129
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H+ V HRD+KP+NLL+ ++K+ DFG + V + + Y PE I G
Sbjct: 130 HS-KRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEXIEGR 186
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+ +D+WS G + E L+G+P F + I +V +F
Sbjct: 187 X-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 228
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
FP + A DL SRLL+++PS R E HP+
Sbjct: 229 TFPDF------------VTEGARDLISRLLKHNPSQRPXLREVLEHPW 264
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 107/214 (50%), Gaps = 18/214 (8%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIK----KVLQDRRYKNR---ELQLMRLMDHP 130
+Y + +G GSFG V A TG+ VA+K KVL + R E+ +RL+ HP
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRG 190
++I L + SKDE+ + V+EY ++ + M+++ + + QI
Sbjct: 74 HIIKL---YDVIKSKDEIIM--VIEYAGNELFDYIVQRDKMSEQE----ARRFFQQIISA 124
Query: 191 LAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPEL 250
+ Y H + HRD+KP+NLL+D + VK+ DFG + ++ G + S Y APE+
Sbjct: 125 VEYCHR-HKIVHRDLKPENLLLDEHLN-VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 182
Query: 251 IFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 284
I G +D+WS G +L +L + F E+
Sbjct: 183 ISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 216
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 107/214 (50%), Gaps = 18/214 (8%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIK----KVLQDRRYKNR---ELQLMRLMDHP 130
+Y + +G GSFG V A TG+ VA+K KVL + R E+ +RL+ HP
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRG 190
++I L + SKDE+ + V+EY ++ + M+++ + + QI
Sbjct: 65 HIIKL---YDVIKSKDEIIM--VIEYAGNELFDYIVQRDKMSEQE----ARRFFQQIISA 115
Query: 191 LAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPEL 250
+ Y H + HRD+KP+NLL+D + VK+ DFG + ++ G + S Y APE+
Sbjct: 116 VEYCHR-HKIVHRDLKPENLLLDEHLN-VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 173
Query: 251 IFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 284
I G +D+WS G +L +L + F E+
Sbjct: 174 ISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 207
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 129/288 (44%), Gaps = 50/288 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F T + L++EY P T+YR L+ S +++ Y+ ++ L+Y
Sbjct: 76 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 126
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H+ V HRD+KP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 127 HS-KRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEGR 183
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+ +D+WS G + E L+G+P F + I +V +F
Sbjct: 184 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 225
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
FP + A DL SRLL+++PS R E HP+
Sbjct: 226 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 261
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 129/288 (44%), Gaps = 50/288 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F T + L++EY P T+YR L+ S +++ Y+ ++ L+Y
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H+ V HRD+KP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 125 HS-KRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTXLCGTLDYLPPEMIEGR 181
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+ +D+WS G + E L+G+P F + I +V +F
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 223
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
FP + A DL SRLL+++PS R E HP+
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 107/214 (50%), Gaps = 18/214 (8%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIK----KVLQDRRYKNR---ELQLMRLMDHP 130
+Y + +G GSFG V A TG+ VA+K KVL + R E+ +RL+ HP
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRG 190
++I L + SKDE+ + V+EY ++ + M+++ + + QI
Sbjct: 69 HIIKL---YDVIKSKDEIIM--VIEYAGNELFDYIVQRDKMSEQE----ARRFFQQIISA 119
Query: 191 LAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPEL 250
+ Y H + HRD+KP+NLL+D + VK+ DFG + ++ G + S Y APE+
Sbjct: 120 VEYCHR-HKIVHRDLKPENLLLDEHLN-VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEV 177
Query: 251 IFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 284
I G +D+WS G +L +L + F E+
Sbjct: 178 ISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES 211
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 131/295 (44%), Gaps = 64/295 (21%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F T + L++EY P T+YR L+ S +++ Y+ ++ L+Y
Sbjct: 75 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 125
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG-------SAKVLVKGEANISYICSRYYRA 247
H+ V HRD+KP+NLL+ ++K+ DFG S + + G + Y
Sbjct: 126 HS-KRVIHRDIKPENLLLGS-AGELKIADFGWSCHAPSSRRTTLSGTLD--------YLP 175
Query: 248 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 307
PE+I G + +D+WS G + E L+G+P F + I +V
Sbjct: 176 PEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV------------ 222
Query: 308 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
+F FP + A DL SRLL+++PS R E HP+
Sbjct: 223 -----EFTFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 129/288 (44%), Gaps = 50/288 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F T + L++EY P T+YR L+ S +++ Y+ ++ L+Y
Sbjct: 74 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 124
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H+ V HRD+KP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 125 HS-KRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEGR 181
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+ +D+WS G + E L+G+P F + I +V +F
Sbjct: 182 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 223
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
FP + A DL SRLL+++PS R E HP+
Sbjct: 224 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 18/207 (8%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISLKHCF 139
+G G+ G+VF+ +G +A K + + R RELQ++ + P ++ F
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 135
Query: 140 FSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+S +++ ME++ ++ +VLK R+P + + + +GL Y+
Sbjct: 136 YSDGE-----ISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLREKH 186
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYT 258
+ HRDVKP N+LV+ ++KLCDFG + L+ AN S++ +R Y +PE + G T Y+
Sbjct: 187 KIMHRDVKPSNILVNS-RGEIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-THYS 243
Query: 259 TSIDIWSAGCVLAELLLGQPLFPGENA 285
DIWS G L E+ +G+ P +A
Sbjct: 244 VQSDIWSMGLSLVEMAVGRYPIPPPDA 270
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 129/288 (44%), Gaps = 50/288 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F T + L++EY P T+YR L+ S +++ Y+ ++ L+Y
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 127
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H+ V HRD+KP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 128 HS-KRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEGR 184
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+ +D+WS G + E L+G+P F + I +V +F
Sbjct: 185 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 226
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
FP + A DL SRLL+++PS R E HP+
Sbjct: 227 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 129/288 (44%), Gaps = 50/288 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F T + L++EY P T+YR L+ S +++ Y+ ++ L+Y
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 127
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H+ V HRD+KP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 128 HS-KRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRDDLCGTLDYLPPEMIEGR 184
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+ +D+WS G + E L+G+P F + I +V +F
Sbjct: 185 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 226
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
FP + A DL SRLL+++PS R E HP+
Sbjct: 227 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 129/288 (44%), Gaps = 50/288 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F T + L++EY P T+YR L+ S +++ Y+ ++ L+Y
Sbjct: 78 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSRFDEQRTATYIT----ELANALSYC 128
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H+ V HRD+KP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 129 HS-KRVIHRDIKPENLLLGS-NGELKIADFGWS-VHAPSSRRDTLCGTLDYLPPEMIEGR 185
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+ +D+WS G + E L+G P F + I +V +F
Sbjct: 186 M-HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRV-----------------EF 227
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
FP + A DL SRLL+++ S R T E HP+
Sbjct: 228 TFPDF------------VTEGARDLISRLLKHNASQRLTLAEVLEHPW 263
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 129/288 (44%), Gaps = 50/288 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ + +A+K + + + K RE+++ + HPN++ L
Sbjct: 11 RPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 70
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F T + L++EY P T+YR L+ S +++ Y+ ++ L+Y
Sbjct: 71 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 121
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H+ V HRD+KP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 122 HS-KRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 178
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+ +D+WS G + E L+G+P F + I +V +F
Sbjct: 179 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 220
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
FP + A DL SRLL+++PS R E HP+
Sbjct: 221 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 256
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 142/306 (46%), Gaps = 56/306 (18%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------------NRELQLMR 125
Y+ + +G+G+ G V A +T + VAI+ ++ R++ E+++++
Sbjct: 151 YIMSKTLGSGACGEVKLAFERKTCKKVAIR-IISKRKFAIGSAREADPALNVETEIEILK 209
Query: 126 LMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTY 185
++HP +I +K+ F ++ ++ L + E +V+ N+R+ KLY Y
Sbjct: 210 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFY 260
Query: 186 QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANI-SYICS 242
Q+ + Y+H G+ HRD+KP+N+L+ +K+ DFG +K+L GE ++ +C
Sbjct: 261 QMLLAVQYLHE-NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCG 317
Query: 243 R-YYRAPELIF--GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 299
Y APE++ G Y ++D WS G +L L G P F L
Sbjct: 318 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---------- 367
Query: 300 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 359
+++I N+ P++ W +V K A+DL +LL P R T EA
Sbjct: 368 -KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEALR 413
Query: 360 HPFFDE 365
HP+ +
Sbjct: 414 HPWLQD 419
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 133/277 (48%), Gaps = 31/277 (11%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISLKHCF 139
+G G+ G+VF+ +G +A K + + R RELQ++ + P ++ F
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 92
Query: 140 FSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+S +++ ME++ ++ +VLK R+P + + + +GL Y+
Sbjct: 93 YSDGE-----ISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLREKH 143
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYT 258
+ HRDVKP N+LV+ ++KLCDFG + L+ AN S++ +R Y +PE + G T Y+
Sbjct: 144 KIMHRDVKPSNILVNS-RGEIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-THYS 200
Query: 259 TSIDIWSAGCVLAELLLGQ-PLFPGEN--AVDQLVEIIKVLGTPTREEIRCMNPNYTDFR 315
DIWS G L E+ +G+ P+ G A+ +L++ I V P + + + DF
Sbjct: 201 VQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYI-VNEPPPKLPSGVFSLEFQDFV 259
Query: 316 FPQIKAHPWHK---------VFHKRMPPEAIDLASRL 343
+ +P + F KR E +D A L
Sbjct: 260 NKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAGWL 296
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 119/250 (47%), Gaps = 27/250 (10%)
Query: 58 TGHIISTTIGGKNGEPK-QTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRY 116
TG++ TIGG+ + + + + E +G+G+ G V++ + +TG +A+K++ RR
Sbjct: 10 TGYL---TIGGQRYQAEINDLENLGE--MGSGTCGQVWKMRFRKTGHVIAVKQM---RRS 61
Query: 117 KNRELQLMRLMDHPNVIS------LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSS 170
N+E LMD V+ + CF + + ++F+ ME + ++ K
Sbjct: 62 GNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFI--AMELMGTCAEKLKKR--- 116
Query: 171 MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL 230
M +P + T I + L Y+ GV HRDVKP N+L+D Q+KLCDFG + L
Sbjct: 117 MQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDE-RGQIKLCDFGISGRL 175
Query: 231 VKGEANISYICSRYYRAPELIF----GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV 286
V +A Y APE I +Y D+WS G L EL GQ FP +N
Sbjct: 176 VDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ--FPYKNCK 233
Query: 287 DQLVEIIKVL 296
+ KVL
Sbjct: 234 TDFEVLTKVL 243
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 130/288 (45%), Gaps = 50/288 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F T + L++EY P T+YR L+ S +++ Y+ ++ L+Y
Sbjct: 77 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 127
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H+ V HRD+KP+NLL+ ++K+ +FG + V + + Y PE+I G
Sbjct: 128 HS-KRVIHRDIKPENLLLGS-AGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 184
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+ +D+WS G + E L+G+P F + I +V +F
Sbjct: 185 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 226
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
FP + A DL SRLL+++PS R E HP+
Sbjct: 227 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 142/306 (46%), Gaps = 56/306 (18%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------------NRELQLMR 125
Y+ + +G+G+ G V A +T + VAI+ ++ R++ E+++++
Sbjct: 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIR-IISKRKFAIGSAREADPALNVETEIEILK 195
Query: 126 LMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTY 185
++HP +I +K+ F ++ ++ L + E +V+ N+R+ KLY Y
Sbjct: 196 KLNHPCIIKIKNFF----DAEDYYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFY 246
Query: 186 QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANI-SYICS 242
Q+ + Y+H G+ HRD+KP+N+L+ +K+ DFG +K+L GE ++ +C
Sbjct: 247 QMLLAVQYLHE-NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCG 303
Query: 243 R-YYRAPELIF--GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 299
Y APE++ G Y ++D WS G +L L G P F L
Sbjct: 304 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL---------- 353
Query: 300 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 359
+++I N+ P++ W +V K A+DL +LL P R T EA
Sbjct: 354 -KDQITSGKYNF----IPEV----WAEVSEK-----ALDLVKKLLVVDPKARFTTEEALR 399
Query: 360 HPFFDE 365
HP+ +
Sbjct: 400 HPWLQD 405
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 130/288 (45%), Gaps = 50/288 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F T + L++EY P T+YR L+ S +++ Y+ ++ L+Y
Sbjct: 76 YGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTATYIT----ELANALSYC 126
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H+ V HRD+KP+NLL+ ++K+ +FG + V + + Y PE+I G
Sbjct: 127 HS-KRVIHRDIKPENLLLGS-AGELKIANFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 183
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+ +D+WS G + E L+G+P F + I +V +F
Sbjct: 184 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 225
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
FP + A DL SRLL+++PS R E HP+
Sbjct: 226 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 261
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 130/295 (44%), Gaps = 48/295 (16%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDHP 130
Y+ +G G+FG V K TG VA+K +L ++ ++ RE+Q ++L HP
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVK-ILNRQKIRSLDVVGKIRREIQNLKLFRHP 76
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRG 190
++I L + ST S ++F+ VMEYV L Y N R+ + QI G
Sbjct: 77 HIIKL-YQVISTPS--DIFM--VMEYVSGGE---LFDYICKNGRLDEKESRRLFQQILSG 128
Query: 191 LAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPEL 250
+ Y H V HRD+KP+N+L+D + K+ DFG + ++ GE S Y APE+
Sbjct: 129 VDYCHR-HMVVHRDLKPENVLLDAHMN-AKIADFGLSNMMSDGEFLRXSCGSPNYAAPEV 186
Query: 251 IFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 310
I G +DIWS+G +L LL G F ++ PT + C
Sbjct: 187 ISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH-------------VPTLFKKICDGIF 233
Query: 311 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 365
YT PQ + P I L +LQ P R T + H +F +
Sbjct: 234 YT----PQY------------LNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQ 272
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 138/296 (46%), Gaps = 44/296 (14%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-----RYKNRELQLMRLMDHPNVI 133
++ +R +G+G+FG V + +G IK + +DR E+++++ +DHPN+I
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGL 191
+ F +D + +VME E + R++ + + + YV Q+ L
Sbjct: 84 KIFEVF-----EDYHNMYIVMETCEGGELLERIVS-AQARGKALSEGYVAELMKQMMNAL 137
Query: 192 AYIHTVPGVCHRDVKPQNLLV-DPLTHQ-VKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
AY H+ V H+D+KP+N+L D H +K+ DFG A++ E + + + Y APE
Sbjct: 138 AYFHS-QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPE 196
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+ + T DIWSAG V+ LL G F G + + +V T +E P
Sbjct: 197 VF--KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTS-------LEEVQQKATYKE-----P 242
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 365
NY ++ P + P+A+DL ++L P R +A + H +F +
Sbjct: 243 NYA------VECRP--------LTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 18/207 (8%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISLKHCF 139
+G G+ G+VF+ +G +A K + + R RELQ++ + P ++ F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 140 FSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+S +++ ME++ ++ +VLK R+P + + + +GL Y+
Sbjct: 74 YSDGE-----ISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLREKH 124
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYT 258
+ HRDVKP N+LV+ ++KLCDFG + L+ AN S++ +R Y +PE + G T Y+
Sbjct: 125 KIMHRDVKPSNILVNS-RGEIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-THYS 181
Query: 259 TSIDIWSAGCVLAELLLGQPLFPGENA 285
DIWS G L E+ +G+ P +A
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDA 208
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 135/296 (45%), Gaps = 51/296 (17%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR-------ELQLMRLMDHPN 131
Y + +G+G++G V K TG AIK + + E+ +++ +DHPN
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 65
Query: 132 VISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSS--MNQRMPLIYVKLYTYQIFR 189
++ L F +D+ LVME +YR + + + Q+ + + Q+
Sbjct: 66 IMKLYEFF-----EDKRNYYLVME-----VYRGGELFDEIILRQKFSEVDAAVIMKQVLS 115
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFG-SAKVLVKGEANISYICSRYYR 246
G Y+H + HRD+KP+NLL++ + +K+ DFG SA V G+ + + YY
Sbjct: 116 GTTYLHK-HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMK-ERLGTAYYI 173
Query: 247 APELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 306
APE++ +Y D+WS G +L LL G P F G+ DQ EI+K R
Sbjct: 174 APEVL--RKKYDEKCDVWSCGVILYILLCGYPPFGGQ--TDQ--EILK----------RV 217
Query: 307 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
++ F P W +V EA L +L Y PS R +A EA HP+
Sbjct: 218 EKGKFS-FDPP-----DWTQV-----SDEAKQLVKLMLTYEPSKRISAEEALNHPW 262
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 148/316 (46%), Gaps = 49/316 (15%)
Query: 71 GEPKQTISYMAERV-VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL-----QLM 124
G+P++ Y+A + +G GS GIV A TG+ VA+KK + R+ + REL +M
Sbjct: 41 GDPRE---YLANFIKIGEGSTGIVCIATEKHTGKQVAVKK-MDLRKQQRRELLFNEVVIM 96
Query: 125 RLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYT 184
R H NV+ + + S DEL++ VME++ + ++ MN+ +
Sbjct: 97 RDYHHDNVVDM---YSSYLVGDELWV--VMEFLEGGALTDIVTHTRMNEEQ----IATVC 147
Query: 185 YQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG-SAKVLVKGEANISYICSR 243
+ R L+Y+H GV HRD+K ++L+ ++KL DFG A+V + + +
Sbjct: 148 LSVLRALSYLHN-QGVIHRDIKSDSILLTS-DGRIKLSDFGFCAQVSKEVPKRKXLVGTP 205
Query: 244 YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 303
Y+ APE+I Y T +DIWS G ++ E++ G+P + E + +
Sbjct: 206 YWMAPEVI-SRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAM------------RR 252
Query: 304 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
IR P P++K HKV + +DL +L PS R TA E HPF
Sbjct: 253 IRDSLP-------PRVK--DLHKV--SSVLRGFLDL---MLVREPSQRATAQELLGHPFL 298
Query: 364 DELREPNARLPNGRPF 379
P+ +P R +
Sbjct: 299 KLAGPPSCIVPLMRQY 314
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 18/207 (8%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISLKHCF 139
+G G+ G+VF+ +G +A K + + R RELQ++ + P ++ F
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 100
Query: 140 FSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+S +++ ME++ ++ +VLK R+P + + + +GL Y+
Sbjct: 101 YSDGE-----ISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLREKH 151
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYT 258
+ HRDVKP N+LV+ ++KLCDFG + L+ AN S++ +R Y +PE + G T Y+
Sbjct: 152 KIMHRDVKPSNILVNS-RGEIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-THYS 208
Query: 259 TSIDIWSAGCVLAELLLGQPLFPGENA 285
DIWS G L E+ +G+ P +A
Sbjct: 209 VQSDIWSMGLSLVEMAVGRYPIPPPDA 235
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 18/207 (8%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISLKHCF 139
+G G+ G+VF+ +G +A K + + R RELQ++ + P ++ F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 140 FSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+S +++ ME++ ++ +VLK R+P + + + +GL Y+
Sbjct: 74 YSDGE-----ISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLREKH 124
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYT 258
+ HRDVKP N+LV+ ++KLCDFG + L+ AN S++ +R Y +PE + G T Y+
Sbjct: 125 KIMHRDVKPSNILVNS-RGEIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-THYS 181
Query: 259 TSIDIWSAGCVLAELLLGQPLFPGENA 285
DIWS G L E+ +G+ P +A
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDA 208
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 18/207 (8%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISLKHCF 139
+G G+ G+VF+ +G +A K + + R RELQ++ + P ++ F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 140 FSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+S +++ ME++ ++ +VLK R+P + + + +GL Y+
Sbjct: 74 YSDGE-----ISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLREKH 124
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYT 258
+ HRDVKP N+LV+ ++KLCDFG + L+ AN S++ +R Y +PE + G T Y+
Sbjct: 125 KIMHRDVKPSNILVNS-RGEIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-THYS 181
Query: 259 TSIDIWSAGCVLAELLLGQPLFPGENA 285
DIWS G L E+ +G+ P +A
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDA 208
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 121/234 (51%), Gaps = 29/234 (12%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 33 PAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+++ ++ P ++ L+ F KD L +VMEYVP M+ L+ R +
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHA 143
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NLL+D + +K+ DFG AK VKG +
Sbjct: 144 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IKVADFGFAK-RVKGRT--WXL 198
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 199 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 129/288 (44%), Gaps = 50/288 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 136 KHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F T + L++EY P +Y+ L+ S +++ Y+ ++ L+Y
Sbjct: 79 YGYFHDATR-----VYLILEYAPRGEVYKELQKLSKFDEQRTATYIT----ELANALSYC 129
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H+ V HRD+KP+NLL+ ++K+ DFG + V + + Y PE+I G
Sbjct: 130 HS-KRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGR 186
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+ +D+WS G + E L+G+P F + I +V +F
Sbjct: 187 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 228
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
FP + A DL SRLL+++PS R E HP+
Sbjct: 229 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 135/301 (44%), Gaps = 51/301 (16%)
Query: 75 QTISYMAERV--VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR-------ELQLMR 125
Q +S +RV +G+G++G V K TG AIK + + E+ +++
Sbjct: 17 QGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 76
Query: 126 LMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSS--MNQRMPLIYVKLY 183
+DHPN++ L F +D+ LVME +YR + + + Q+ + +
Sbjct: 77 QLDHPNIMKLYEFF-----EDKRNYYLVME-----VYRGGELFDEIILRQKFSEVDAAVI 126
Query: 184 TYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANISYIC 241
Q+ G Y+H + HRD+KP+NLL++ + +K+ DFG + G +
Sbjct: 127 MKQVLSGTTYLHK-HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLG 185
Query: 242 SRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 301
+ YY APE++ +Y D+WS G +L LL G P F G+ DQ ++L +
Sbjct: 186 TAYYIAPEVL--RKKYDEKCDVWSCGVILYILLCGYPPFGGQT--DQ-----EILKRVEK 236
Query: 302 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHP 361
+ P++T ++ EA L +L Y PS R +A EA HP
Sbjct: 237 GKFSFDPPDWT------------------QVSDEAKQLVKLMLTYEPSKRISAEEALNHP 278
Query: 362 F 362
+
Sbjct: 279 W 279
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 18/207 (8%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISLKHCF 139
+G G+ G+VF+ +G +A K + + R RELQ++ + P ++ F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 140 FSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+S +++ ME++ ++ +VLK R+P + + + +GL Y+
Sbjct: 74 YSDGE-----ISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLREKH 124
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYT 258
+ HRDVKP N+LV+ ++KLCDFG + L+ AN S++ +R Y +PE + G T Y+
Sbjct: 125 KIMHRDVKPSNILVNS-RGEIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-THYS 181
Query: 259 TSIDIWSAGCVLAELLLGQPLFPGENA 285
DIWS G L E+ +G+ P +A
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDA 208
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 107/207 (51%), Gaps = 18/207 (8%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISLKHCF 139
+G G+ G+VF+ +G +A K + + R RELQ++ + P ++ F
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 140 FSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+S +++ ME++ ++ +VLK R+P + + + +GL Y+
Sbjct: 74 YSDGE-----ISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLREKH 124
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYT 258
+ HRDVKP N+LV+ ++KLCDFG + L+ AN S++ +R Y +PE + G T Y+
Sbjct: 125 KIMHRDVKPSNILVNS-RGEIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQG-THYS 181
Query: 259 TSIDIWSAGCVLAELLLGQPLFPGENA 285
DIWS G L E+ +G+ P +A
Sbjct: 182 VQSDIWSMGLSLVEMAVGRYPIPPPDA 208
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 50/288 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ +A+K + + + K RE+++ + HPN++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 136 KHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F T + L++EY P +Y+ L+ S +++ Y+ ++ L+Y
Sbjct: 79 YGYFHDATR-----VYLILEYAPRGEVYKELQKLSKFDEQRTATYIT----ELANALSYC 129
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H+ V HRD+KP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 130 HS-KRVIHRDIKPENLLLGS-AGELKIADFGWS-VHAPSSRRXXLXGTLDYLPPEMIEGR 186
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
+ +D+WS G + E L+G+P F + I +V +F
Sbjct: 187 M-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV-----------------EF 228
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
FP + A DL SRLL+++PS R E HP+
Sbjct: 229 TFPDF------------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 264
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 144/322 (44%), Gaps = 52/322 (16%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPNVISLKHC 138
+G G+F +V + + G+ A K + +D + RE ++ RL+ HPN++ L H
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL-HD 88
Query: 139 FFSTTSKDELFLNLVM--EYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHT 196
S L +LV E + + R ++YS + + QI + + H
Sbjct: 89 SISEEGHHYLIFDLVTGGELFEDIVAR--EYYSEADASHCI-------QQILEAVLHCHQ 139
Query: 197 VPGVCHRDVKPQNLLVDPLTH--QVKLCDFGSAKVLVKGE--ANISYICSRYYRAPELIF 252
+ GV HRD+KP+NLL+ VKL DFG A + V+GE A + + Y +PE +
Sbjct: 140 M-GVVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPE-VL 196
Query: 253 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 312
Y +D+W+ G +L LL+G P F E+ +L + IK
Sbjct: 197 RKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ-HRLYQQIKA--------------GAY 241
Query: 313 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNAR 372
DF P+ W V PEA DL +++L +PS R TA EA HP+ +
Sbjct: 242 DFPSPE-----WDTV-----TPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASC 291
Query: 373 LPNGRPFPPL--FNFKQELAGA 392
+ L FN +++L GA
Sbjct: 292 MHRQETVDCLKKFNARRKLKGA 313
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 147/337 (43%), Gaps = 68/337 (20%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIK-----KVLQDRRY-----KNRELQLMRLMDHPNV 132
RV+G GSFG V A+ ETG+ A+K +LQD + R L L R +HP +
Sbjct: 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR--NHPFL 86
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYV--PETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRG 190
L CF + D LF VME+V + M+ + K ++R + Y +I
Sbjct: 87 TQLFCCF---QTPDRLF--FVMEFVNGGDLMFHIQK-----SRRFDEARARFYAAEIISA 136
Query: 191 LAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV-LVKGEANISYICSRYYRAPE 249
L ++H G+ +RD+K N+L+D H KL DFG K + G ++ + Y APE
Sbjct: 137 LMFLHD-KGIIYRDLKLDNVLLDHEGH-CKLADFGMCKEGICNGVTTATFCGTPDYIAPE 194
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
I Y ++D W+ G +L E+L G F EN D L E I +E+
Sbjct: 195 -ILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE-DDLFEAI------LNDEV----- 241
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA------HPFF 363
V+ + +A + + +P++R +L HPFF
Sbjct: 242 -----------------VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFF 284
Query: 364 DELREPNARLPNGR---PFPPLFNFKQELAGASPELI 397
E+ A+L + + PF P +++++ P+ I
Sbjct: 285 KEIDW--AQLNHRQIEPPFRPRIKSREDVSNFDPDFI 319
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 148/338 (43%), Gaps = 66/338 (19%)
Query: 76 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDH 129
T Y +G G+F +V + + TG+ A K + +D + RE ++ RL+ H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 130 PNVISLK---------HCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYV 180
PN++ L + F + ELF ++V ++YS + +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR----------EYYSEADASHCI--- 109
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTH--QVKLCDFGSAKVLVKG--EAN 236
QI + + H + G+ HRD+KP+NLL+ + VKL DFG A + V+G +A
Sbjct: 110 ----QQILESVNHCH-LNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAW 163
Query: 237 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 296
+ + Y +PE + Y +D+W+ G +L LL+G P F E+ +L + IK
Sbjct: 164 FGFAGTPGYLSPE-VLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQ-HRLYQQIKA- 220
Query: 297 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 356
DF P+ W V PEA DL +++L +P+ R TA E
Sbjct: 221 -------------GAYDFPSPE-----WDTV-----TPEAKDLINKMLTINPAKRITASE 257
Query: 357 ACAHPFFDELREPNARLPNGRPFPPL--FNFKQELAGA 392
A HP+ + + + L FN +++L GA
Sbjct: 258 ALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGA 295
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 121/234 (51%), Gaps = 29/234 (12%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 33 PAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+++ ++ P ++ L+ F KD L +VMEY+P M+ L+ R +
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYMPGGDMFSHLRRIG----RFSEPHA 143
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NLL+D + +K+ DFG AK VKG +
Sbjct: 144 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IKVADFGFAK-RVKGRT--WXL 198
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 199 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 148/338 (43%), Gaps = 66/338 (19%)
Query: 76 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDH 129
T Y +G G+F +V + + TG+ A K + +D + RE ++ RL+ H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 130 PNVISLK---------HCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYV 180
PN++ L + F + ELF ++V ++YS + +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR----------EYYSEADASHCI--- 109
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTH--QVKLCDFGSAKVLVKG--EAN 236
QI + + H + G+ HRD+KP+NLL+ + VKL DFG A + V+G +A
Sbjct: 110 ----QQILESVNHCH-LNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAW 163
Query: 237 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 296
+ + Y +PE + Y +D+W+ G +L LL+G P F E+ +L + IK
Sbjct: 164 FGFAGTPGYLSPE-VLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQ-HRLYQQIKA- 220
Query: 297 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 356
DF P+ W V PEA DL +++L +P+ R TA E
Sbjct: 221 -------------GAYDFPSPE-----WDTV-----TPEAKDLINKMLTINPAKRITASE 257
Query: 357 ACAHPFFDELREPNARLPNGRPFPPL--FNFKQELAGA 392
A HP+ + + + L FN +++L GA
Sbjct: 258 ALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGA 295
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 121/234 (51%), Gaps = 29/234 (12%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 33 PAQNTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+++ ++ P ++ L+ F KD L +VMEY+P M+ L+ R +
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYMPGGDMFSHLRRIG----RFSEPHA 143
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NLL+D + +K+ DFG AK VKG +
Sbjct: 144 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IKVADFGFAK-RVKGRT--WXL 198
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 199 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 126/252 (50%), Gaps = 27/252 (10%)
Query: 62 ISTTIGGKNGEPKQTISYMAE-RVVGTGSFGIVFQAKCL---ETGETVAIKKV------L 111
IS T K G K S+ +V+G GSFG VF + + ++G A+K + +
Sbjct: 12 ISITHHVKAGSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKV 71
Query: 112 QDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYV--PETMYRVLKHYS 169
+DR E ++ ++HP V+ L H F T K L L+++++ + R+ K
Sbjct: 72 RDRVRTKMERDILADVNHPFVVKL-HYAFQTEGK----LYLILDFLRGGDLFTRLSKEVM 126
Query: 170 SMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 229
+ VK Y ++ GL ++H++ G+ +RD+KP+N+L+D H +KL DFG +K
Sbjct: 127 FTEED-----VKFYLAELALGLDHLHSL-GIIYRDLKPENILLDEEGH-IKLTDFGLSKE 179
Query: 230 LVKGEANISYICSRY-YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQ 288
+ E C Y APE++ ++ S D WS G ++ E+L G F G++ +
Sbjct: 180 AIDHEKKAYSFCGTVEYMAPEVV-NRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKET 238
Query: 289 LVEIIKV-LGTP 299
+ I+K LG P
Sbjct: 239 MTLILKAKLGMP 250
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 136/308 (44%), Gaps = 45/308 (14%)
Query: 66 IGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKV----LQDRRYKNREL 121
+ K G + ++G G FG V + + TG +A K + ++D+ E+
Sbjct: 78 VTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEI 137
Query: 122 QLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIY 179
+M +DH N+I L F SK+++ L VMEYV E R++ ++ + +++
Sbjct: 138 SVMNQLDHANLIQLYDAF---ESKNDIVL--VMEYVDGGELFDRIIDESYNLTELDTILF 192
Query: 180 VKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLL-VDPLTHQVKLCDFGSAKVLVKGEANIS 238
+K QI G+ ++H + + H D+KP+N+L V+ Q+K+ DFG A+ E
Sbjct: 193 MK----QICEGIRHMHQMY-ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV 247
Query: 239 YICSRYYRAPELI-FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG 297
+ + APE++ + + T D+WS G + LL G F G+N + L I+
Sbjct: 248 NFGTPEFLAPEVVNYDFVSFPT--DMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRW 305
Query: 298 TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEA 357
EE + + EA + S+LL S R +A EA
Sbjct: 306 DLEDEEFQ-------------------------DISEEAKEFISKLLIKEKSWRISASEA 340
Query: 358 CAHPFFDE 365
HP+ +
Sbjct: 341 LKHPWLSD 348
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 120/234 (51%), Gaps = 29/234 (12%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K +E++
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+++ ++ P ++ L+ F KD L +VMEY P M+ L+ R +
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYAPGGEMFSHLRRIG----RFSEPHA 143
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NL++D + +K+ DFG AK VKG +
Sbjct: 144 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLMIDQQGY-IKVTDFGLAK-RVKGRT--WXL 198
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 199 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 121/234 (51%), Gaps = 29/234 (12%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+++ ++ P ++ L+ F KD L +VMEYVP M+ L+ R +
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHA 143
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NLL+D + +++ DFG AK VKG +
Sbjct: 144 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXL 198
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 199 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 121/234 (51%), Gaps = 29/234 (12%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+++ ++ P ++ L+ F KD L +VMEYVP M+ L+ R +
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHA 143
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NLL+D + +++ DFG AK VKG +
Sbjct: 144 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXL 198
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 199 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 133/289 (46%), Gaps = 36/289 (12%)
Query: 73 PKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM 127
P+Q + AE + +G G++G V + +G+ +A+K++ R + + Q LM
Sbjct: 13 PEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRI---RSTVDEKEQKQLLM 69
Query: 128 DHPNVISLKHCFFSTTSKDELFLN----LVMEYVPETMYRVLKH-YSSMNQRMPLIYVKL 182
D V+ C + LF + ME + + + K+ YS ++ +P +
Sbjct: 70 DLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGK 129
Query: 183 YTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICS 242
T + L ++ + HRD+KP N+L+D + +KLCDFG + LV A
Sbjct: 130 ITLATVKALNHLKENLKIIHRDIKPSNILLD-RSGNIKLCDFGISGQLVDSIAKTRDAGC 188
Query: 243 RYYRAPELIFGATE---YTTSIDIWSAGCVLAELLLGQPLFPGENAV-DQLVEIIKVLGT 298
R Y APE I + Y D+WS G L EL G+ +P N+V DQL +++K G
Sbjct: 189 RPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK--GD 246
Query: 299 P---TREEIRCMNPNYTDF-------------RFPQIKAHPWHKVFHKR 331
P + E R +P++ +F ++ ++ HP+ ++ +R
Sbjct: 247 PPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEER 295
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 149/343 (43%), Gaps = 84/343 (24%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIK-----KVLQ----DRRYKNRELQLMRLMDH 129
Y + +G GS+G+V A +T AIK K+ Q D E++LM+ + H
Sbjct: 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHH 87
Query: 130 PNVISLKHCFFSTTSKDELFLNLVME-------------YVPETMYR----VLK------ 166
PN+ L + +DE ++ LVME ++ ++ + V+K
Sbjct: 88 PNIARLYEVY-----EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPC 142
Query: 167 ---HYSSMNQ-----RMPLIYV---KLYTY---QIFRGLAYIHTVPGVCHRDVKPQNLLV 212
+ ++N R L +V KL + QIF L Y+H G+CHRD+KP+N L
Sbjct: 143 PECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN-QGICHRDIKPENFLF 201
Query: 213 DP-LTHQVKLCDFGSAKVLVK---GE--ANISYICSRYYRAPELIFGATE-YTTSIDIWS 265
+ ++KL DFG +K K GE + + Y+ APE++ E Y D WS
Sbjct: 202 STNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWS 261
Query: 266 AGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 325
AG +L LL+G FPG N D + +++ +++ NPNY
Sbjct: 262 AGVLLHLLLMGAVPFPGVNDADTISQVLN-------KKLCFENPNYN------------- 301
Query: 326 KVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 368
+ P A DL S LL + R A+ A HP+ + +
Sbjct: 302 -----VLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSD 339
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 121/234 (51%), Gaps = 29/234 (12%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+++ ++ P ++ L+ F KD L +VMEYVP M+ L+ R +
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHA 143
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NLL+D + +++ DFG AK VKG +
Sbjct: 144 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXL 198
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 199 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 103/199 (51%), Gaps = 18/199 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISLKHCF 139
+G G+ G+VF+ +G +A K + + R RELQ++ + P ++ F
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 140 FSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+S +++ ME++ ++ +VLK R+P + + + +GL Y+
Sbjct: 77 YSDGE-----ISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLREKH 127
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYT 258
+ HRDVKP N+LV+ ++KLCDFG + L+ AN ++ +R Y +PE + G T Y+
Sbjct: 128 KIMHRDVKPSNILVNS-RGEIKLCDFGVSGQLIDEMAN-EFVGTRSYMSPERLQG-THYS 184
Query: 259 TSIDIWSAGCVLAELLLGQ 277
DIWS G L E+ +G+
Sbjct: 185 VQSDIWSMGLSLVEMAVGR 203
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 120/234 (51%), Gaps = 28/234 (11%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+++ ++ P ++ L+ F KD L +VMEYVP M+ L+ R +
Sbjct: 94 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHA 144
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NLL+D + +++ DFG AK VKG +
Sbjct: 145 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXL 199
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + +I+
Sbjct: 200 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 252
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 121/234 (51%), Gaps = 29/234 (12%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+++ ++ P ++ L+ F KD L +VMEYVP M+ L+ R +
Sbjct: 94 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHA 144
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NLL+D + +++ DFG AK VKG +
Sbjct: 145 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRTWT--L 199
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 200 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 24/217 (11%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDH 129
+Y ++ +G G+F V A+ + TG VA+K + D+ N RE+++M++++H
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKII--DKTQLNPTSLQKLFREVRIMKILNH 73
Query: 130 PNVISLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQI 187
PN++ L + E L LVMEY E ++ H RM + QI
Sbjct: 74 PNIVKLFEVI-----ETEKTLYLVMEYASGGEVFDYLVAH-----GRMKEKEARAKFRQI 123
Query: 188 FRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRA 247
+ Y H + HRD+K +NLL+D +K+ DFG + G ++ S Y A
Sbjct: 124 VSAVQYCHQ-KYIVHRDLKAENLLLDG-DMNIKIADFGFSNEFTVGNKLDTFCGSPPYAA 181
Query: 248 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 284
PEL G +D+WS G +L L+ G F G+N
Sbjct: 182 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 121/234 (51%), Gaps = 29/234 (12%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K ETG A+K + + + K ++++
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+++ ++ P ++ L++ F KD L +VMEYVP M+ L+ R +
Sbjct: 93 RILQAVNFPFLVKLEYSF-----KDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHA 143
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NLL+D + +++ DFG AK VKG +
Sbjct: 144 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXL 198
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 199 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 121/234 (51%), Gaps = 29/234 (12%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+++ ++ P ++ L+ F KD L +VMEYVP M+ L+ R +
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIG----RFXEPHA 143
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NLL+D + +++ DFG AK VKG +
Sbjct: 144 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXL 198
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 199 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 121/234 (51%), Gaps = 29/234 (12%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K ETG A+K + + + K ++++
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+++ ++ P ++ L++ F KD L +VMEYVP M+ L+ R +
Sbjct: 93 RILQAVNFPFLVKLEYSF-----KDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHA 143
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NLL+D + +++ DFG AK VKG +
Sbjct: 144 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXL 198
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 199 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 121/234 (51%), Gaps = 29/234 (12%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K ETG A+K + + + K ++++
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+++ ++ P ++ L++ F KD L +VMEYVP M+ L+ R +
Sbjct: 93 RILQAVNFPFLVKLEYSF-----KDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHA 143
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NLL+D + +++ DFG AK VKG +
Sbjct: 144 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXL 198
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 199 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 121/234 (51%), Gaps = 29/234 (12%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+++ ++ P ++ L+ F KD L +VMEYVP M+ L+ R +
Sbjct: 94 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIG----RFXEPHA 144
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NLL+D + +++ DFG AK VKG +
Sbjct: 145 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXL 199
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 200 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 121/234 (51%), Gaps = 29/234 (12%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+++ ++ P ++ L+ F KD L +VMEYVP M+ L+ R +
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIG----RFXEPHA 143
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NLL+D + +++ DFG AK VKG +
Sbjct: 144 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXL 198
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 199 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 125/257 (48%), Gaps = 32/257 (12%)
Query: 56 AVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAI--KKVLQ- 112
A+T H+ G + +P Q + +V+G GSFG VF K + + + KVL+
Sbjct: 9 AITHHVKE---GHEKADPSQ---FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKK 62
Query: 113 ------DRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYV--PETMYRV 164
DR E ++ ++HP ++ L H F T K L L+++++ + R+
Sbjct: 63 ATLKVRDRVRTKMERDILVEVNHPFIVKL-HYAFQTEGK----LYLILDFLRGGDLFTRL 117
Query: 165 LKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDF 224
K + VK Y ++ L ++H++ G+ +RD+KP+N+L+D H +KL DF
Sbjct: 118 SKEVMFTEED-----VKFYLAELALALDHLHSL-GIIYRDLKPENILLDEEGH-IKLTDF 170
Query: 225 GSAKVLVKGEANISYICSRY-YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGE 283
G +K + E C Y APE++ +T S D WS G ++ E+L G F G+
Sbjct: 171 GLSKESIDHEKKAYSFCGTVEYMAPEVV-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGK 229
Query: 284 NAVDQLVEIIKV-LGTP 299
+ + + I+K LG P
Sbjct: 230 DRKETMTMILKAKLGMP 246
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 121/234 (51%), Gaps = 29/234 (12%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 19 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 78
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+++ ++ P ++ L+ F KD L +VMEYVP M+ L+ R +
Sbjct: 79 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHA 129
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NLL+D + +++ DFG AK VKG +
Sbjct: 130 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRTWT--L 184
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 185 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 236
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 120/234 (51%), Gaps = 29/234 (12%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+++ ++ P ++ L+ F KD L +VMEY P M+ L+ R +
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYAPGGEMFSHLRRIG----RFSEPHA 143
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NL++D + +K+ DFG AK VKG +
Sbjct: 144 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLMIDQQGY-IKVTDFGFAK-RVKGRT--WXL 198
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 199 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 18/212 (8%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------RELQLMRLMDHPN 131
Y+ +G GSFG V A +T + VA+K + + K+ RE+ ++L+ HP+
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 132 VISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGL 191
+I L + T + +V+EY ++ Y +RM + + QI +
Sbjct: 71 IIKLYDVITTPTD-----IVMVIEYAGGELF----DYIVEKKRMTEDEGRRFFQQIICAI 121
Query: 192 AYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELI 251
Y H + HRD+KP+NLL+D VK+ DFG + ++ G + S Y APE+I
Sbjct: 122 EYCHR-HKIVHRDLKPENLLLDD-NLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI 179
Query: 252 FGATEYTTSIDIWSAGCVLAELLLGQPLFPGE 283
G +D+WS G VL +L+G+ F E
Sbjct: 180 NGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDE 211
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 149/353 (42%), Gaps = 55/353 (15%)
Query: 46 MSAAVIQGNDAVTGHIISTTIGGKN-----GEPKQTISYMAERVVGTGSFGIVFQAKCLE 100
MSAA+ + + + H+ + K +P+ YM R +G G F ++ ++
Sbjct: 6 MSAAIAKPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMD 65
Query: 101 TGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLV 153
T E A K V + K + E+ + + +D+P+V+ H FF +D+ F+ +V
Sbjct: 66 TKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF-HGFF----EDDDFVYVV 120
Query: 154 MEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 213
+E R L + + + + Q +G+ Y+H V HRD+K NL ++
Sbjct: 121 LEICRR---RSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHN-NRVIHRDLKLGNLFLN 176
Query: 214 PLTHQVKLCDFGSA-KVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAE 272
VK+ DFG A K+ GE + + Y APE + ++ +DIWS GC+L
Sbjct: 177 D-DMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPE-VLCKKGHSFEVDIWSLGCILYT 234
Query: 273 LLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRM 332
LL+G+P F E C+ Y +IK + + H +
Sbjct: 235 LLVGKPPF----------------------ETSCLKETYI-----RIKKNEYSVPRH--I 265
Query: 333 PPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNG-RPFPPLFN 384
P A L R+L P+LR + E FF P RLP PP F+
Sbjct: 266 NPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAP-MRLPTSCLTVPPRFS 317
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 120/234 (51%), Gaps = 29/234 (12%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K +E++
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+++ ++ P ++ L+ F KD L +VMEY P M+ L+ R +
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYAPGGEMFSHLRRIG----RFSEPHA 143
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NL++D + +++ DFG AK VKG +
Sbjct: 144 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLMIDQQGY-IQVTDFGLAK-RVKGRT--WXL 198
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 199 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 120/234 (51%), Gaps = 29/234 (12%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+++ ++ P ++ L+ F KD L +VMEY P M+ L+ R +
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYAPGGEMFSHLRRIG----RFXEPHA 143
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NL++D + +K+ DFG AK VKG +
Sbjct: 144 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLMIDQQGY-IKVTDFGFAK-RVKGRT--WXL 198
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 199 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 125/257 (48%), Gaps = 32/257 (12%)
Query: 56 AVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAI--KKVLQ- 112
A+T H+ G + +P Q + +V+G GSFG VF K + + + KVL+
Sbjct: 10 AITHHVKE---GHEKADPSQ---FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKK 63
Query: 113 ------DRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYV--PETMYRV 164
DR E ++ ++HP ++ L H F T K L L+++++ + R+
Sbjct: 64 ATLKVRDRVRTKMERDILVEVNHPFIVKL-HYAFQTEGK----LYLILDFLRGGDLFTRL 118
Query: 165 LKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDF 224
K + VK Y ++ L ++H++ G+ +RD+KP+N+L+D H +KL DF
Sbjct: 119 SKEVMFTEED-----VKFYLAELALALDHLHSL-GIIYRDLKPENILLDEEGH-IKLTDF 171
Query: 225 GSAKVLVKGEANISYICSRY-YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGE 283
G +K + E C Y APE++ +T S D WS G ++ E+L G F G+
Sbjct: 172 GLSKESIDHEKKAYSFCGTVEYMAPEVV-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGK 230
Query: 284 NAVDQLVEIIKV-LGTP 299
+ + + I+K LG P
Sbjct: 231 DRKETMTMILKAKLGMP 247
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 110/220 (50%), Gaps = 23/220 (10%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISLK 136
V+G GSFG V A T E AIK + +D ++ +++ ++ L+D P ++
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 137 HCFFSTTSKDELFLNLVMEYV--PETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
H F T + L VMEYV + MY + + + + Y +I GL ++
Sbjct: 86 HSCFQTVDR----LYFVMEYVNGGDLMYHI-QQVGKFKEPQAVFYAA----EISIGLFFL 136
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV-LVKGEANISYICSRYYRAPELIFG 253
H G+ +RD+K N+++D H +K+ DFG K ++ G + + Y APE+I
Sbjct: 137 HK-RGIIYRDLKLDNVMLDSEGH-IKIADFGMCKEHMMDGVTTREFCGTPDYIAPEII-A 193
Query: 254 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
Y S+D W+ G +L E+L GQP F GE+ D+L + I
Sbjct: 194 YQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE-DELFQSI 232
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 125/257 (48%), Gaps = 32/257 (12%)
Query: 56 AVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAI--KKVLQ- 112
A+T H+ G + +P Q + +V+G GSFG VF K + + + KVL+
Sbjct: 9 AITHHVKE---GHEKADPSQ---FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKK 62
Query: 113 ------DRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYV--PETMYRV 164
DR E ++ ++HP ++ L H F T K L L+++++ + R+
Sbjct: 63 ATLKVRDRVRTKMERDILVEVNHPFIVKL-HYAFQTEGK----LYLILDFLRGGDLFTRL 117
Query: 165 LKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDF 224
K + VK Y ++ L ++H++ G+ +RD+KP+N+L+D H +KL DF
Sbjct: 118 SKEVMFTEED-----VKFYLAELALALDHLHSL-GIIYRDLKPENILLDEEGH-IKLTDF 170
Query: 225 GSAKVLVKGEANISYICSRY-YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGE 283
G +K + E C Y APE++ +T S D WS G ++ E+L G F G+
Sbjct: 171 GLSKESIDHEKKAYSFCGTVEYMAPEVV-NRRGHTQSADWWSFGVLMFEMLTGTLPFQGK 229
Query: 284 NAVDQLVEIIKV-LGTP 299
+ + + I+K LG P
Sbjct: 230 DRKETMTMILKAKLGMP 246
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 124/281 (44%), Gaps = 39/281 (13%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKK--VLQDRRYKNRELQLMRLMDHPNVISLKHCFFST 142
+G GS+G V++A ETG+ VAIK+ V D + +E+ +M+ D P+V+ +F
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKN 96
Query: 143 TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCH 202
T L +VMEY V N+ + + +GL Y+H + + H
Sbjct: 97 TD-----LWIVMEYCGAG--SVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKI-H 148
Query: 203 RDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS-YICSRYYRAPELIFGATEYTTSI 261
RD+K N+L++ H KL DFG A L A + I + ++ APE+I Y
Sbjct: 149 RDIKAGNILLNTEGH-AKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVI-QEIGYNCVA 206
Query: 262 DIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA 321
DIWS G E+ G+P + + + + I PT NP T FR P++
Sbjct: 207 DIWSLGITAIEMAEGKPPYADIHPMRAIFMI------PT-------NPPPT-FRKPEL-- 250
Query: 322 HPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
W F D + L SP R TA + HPF
Sbjct: 251 --WSDNF--------TDFVKQCLVKSPEQRATATQLLQHPF 281
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 119/234 (50%), Gaps = 28/234 (11%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K ETG A+K + + + K ++++
Sbjct: 54 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 113
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+++ ++ P ++ L+ F KD L +VMEYVP M+ L+ R +
Sbjct: 114 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHA 164
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NLL+D + +++ DFG AK VKG +
Sbjct: 165 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXL 219
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + +I+
Sbjct: 220 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIV 272
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 148/353 (41%), Gaps = 55/353 (15%)
Query: 46 MSAAVIQGNDAVTGHIISTTIGGKN-----GEPKQTISYMAERVVGTGSFGIVFQAKCLE 100
MSAA+ + + + H+ + K +P+ YM R +G G F ++ ++
Sbjct: 6 MSAAIAKPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMD 65
Query: 101 TGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLV 153
T E A K V + K + E+ + + +D+P+V+ H FF +D+ F+ +V
Sbjct: 66 TKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF-HGFF----EDDDFVYVV 120
Query: 154 MEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 213
+E R L + + + + Q +G+ Y+H V HRD+K NL ++
Sbjct: 121 LEICRR---RSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHN-NRVIHRDLKLGNLFLN 176
Query: 214 PLTHQVKLCDFGSA-KVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAE 272
VK+ DFG A K+ GE + Y APE + ++ +DIWS GC+L
Sbjct: 177 D-DMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPE-VLCKKGHSFEVDIWSLGCILYT 234
Query: 273 LLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRM 332
LL+G+P F E C+ Y +IK + + H +
Sbjct: 235 LLVGKPPF----------------------ETSCLKETYI-----RIKKNEYSVPRH--I 265
Query: 333 PPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNG-RPFPPLFN 384
P A L R+L P+LR + E FF P RLP PP F+
Sbjct: 266 NPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAP-MRLPTSCLTVPPRFS 317
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 146/331 (44%), Gaps = 52/331 (15%)
Query: 76 TISYMAERVVGTGSFGIVFQ-AKCLETGETVAI-----KKVLQDRRYKNRELQLMRLMDH 129
T Y +G G+F +V + K L E A+ K +D + RE ++ RL+ H
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 130 PNVISLKHCFFSTTSKDELFLNLVM--EYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQI 187
PN++ L H S L +LV E + + R ++YS + + QI
Sbjct: 70 PNIVRL-HDSISEEGHHYLIFDLVTGGELFEDIVAR--EYYSEADASHCI-------QQI 119
Query: 188 FRGLAYIHTVPGVCHRDVKPQNLLVDPLTH--QVKLCDFGSAKVLVKGE--ANISYICSR 243
+ + H + GV HR++KP+NLL+ VKL DFG A + V+GE A + +
Sbjct: 120 LEAVLHCHQM-GVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTP 177
Query: 244 YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 303
Y +PE + Y +D+W+ G +L LL+G P F E+ +L + IK
Sbjct: 178 GYLSPE-VLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ-HRLYQQIKA-------- 227
Query: 304 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
DF P+ W V PEA DL +++L +PS R TA EA HP+
Sbjct: 228 ------GAYDFPSPE-----WDTV-----TPEAKDLINKMLTINPSKRITAAEALKHPWI 271
Query: 364 DELREPNARLPNGRPFPPL--FNFKQELAGA 392
+ + L FN +++L GA
Sbjct: 272 SHRSTVASCMHRQETVDCLKKFNARRKLKGA 302
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 120/234 (51%), Gaps = 29/234 (12%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K ETG A+K + + + K ++++
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+++ ++ P ++ L+ F KD L +VMEYVP M+ L+ R +
Sbjct: 94 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHA 144
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NLL+D + +++ DFG AK VKG +
Sbjct: 145 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXL 199
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 200 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 120/234 (51%), Gaps = 29/234 (12%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K ETG A+K + + + K ++++
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+++ ++ P ++ L+ F KD L +VMEYVP M+ L+ R +
Sbjct: 94 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHA 144
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NLL+D + +++ DFG AK VKG +
Sbjct: 145 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXL 199
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 200 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 120/234 (51%), Gaps = 29/234 (12%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K ETG A+K + + + K ++++
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+++ ++ P ++ L+ F KD L +VMEYVP M+ L+ R +
Sbjct: 94 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHA 144
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NLL+D + +++ DFG AK VKG +
Sbjct: 145 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXL 199
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 200 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 137/300 (45%), Gaps = 50/300 (16%)
Query: 74 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN----RELQLMRLMDH 129
++T +M V+G+G+F VF K TG+ A+K + + +++ E+ +++ + H
Sbjct: 8 RKTFIFM--EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKH 65
Query: 130 PNVISLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQI 187
N+++L+ + STT LVM+ V E R+L+ + L+ Q+
Sbjct: 66 ENIVTLEDIYESTTH-----YYLVMQLVSGGELFDRILERGVYTEKDASLV-----IQQV 115
Query: 188 FRGLAYIHTVPGVCHRDVKPQNLL-VDPLTH-QVKLCDFGSAKVLVKGEANISYICSR-Y 244
+ Y+H G+ HRD+KP+NLL + P + ++ + DFG +K+ G +S C
Sbjct: 116 LSAVKYLHE-NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG--IMSTACGTPG 172
Query: 245 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 304
Y APE + Y+ ++D WS G + LL G P F E +L E IK
Sbjct: 173 YVAPE-VLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE-SKLFEKIK---------- 220
Query: 305 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 364
Y +F P F + A D LL+ P+ R T +A +HP+ D
Sbjct: 221 ----EGYYEFESP----------FWDDISESAKDFICHLLEKDPNERYTCEKALSHPWID 266
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 120/286 (41%), Gaps = 37/286 (12%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTS 144
+G G++G+V + + + +G+ A+K++ R N + Q L D C F+ T
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRI---RATVNSQEQKRLLXDLDISXRTVDCPFTVTF 98
Query: 145 KDELF----LNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGV 200
LF + + E ++ + K Q +P + I + L ++H+ V
Sbjct: 99 YGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 158
Query: 201 CHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELI---FGATEY 257
HRDVKP N+L++ L QVK CDFG + LV A + Y APE I Y
Sbjct: 159 IHRDVKPSNVLINALG-QVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQKGY 217
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFP 317
+ DIWS G EL + + FP ++ GTP ++
Sbjct: 218 SVKSDIWSLGITXIELAILR--FPYDS-----------WGTPFQQ-------------LK 251
Query: 318 QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
Q+ P ++ + E +D S+ L+ + R T E HPFF
Sbjct: 252 QVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 120/234 (51%), Gaps = 29/234 (12%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K ETG A+K + + + K ++++
Sbjct: 26 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 85
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+++ ++ P ++ L+ F KD L +VMEYVP M+ L+ R +
Sbjct: 86 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHA 136
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NLL+D + +++ DFG AK VKG +
Sbjct: 137 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXL 191
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 192 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 243
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 148/353 (41%), Gaps = 55/353 (15%)
Query: 46 MSAAVIQGNDAVTGHIISTTIGGKN-----GEPKQTISYMAERVVGTGSFGIVFQAKCLE 100
MSAA+ + + + H+ + K +P+ YM R +G G F ++ ++
Sbjct: 6 MSAAIAKPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMD 65
Query: 101 TGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLV 153
T E A K V + K + E+ + + +D+P+V+ H FF +D+ F+ +V
Sbjct: 66 TKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGF-HGFF----EDDDFVYVV 120
Query: 154 MEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 213
+E R L + + + + Q +G+ Y+H V HRD+K NL ++
Sbjct: 121 LEICRR---RSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHN-NRVIHRDLKLGNLFLN 176
Query: 214 PLTHQVKLCDFGSA-KVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAE 272
VK+ DFG A K+ GE + Y APE + ++ +DIWS GC+L
Sbjct: 177 D-DMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPE-VLCKKGHSFEVDIWSLGCILYT 234
Query: 273 LLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRM 332
LL+G+P F E C+ Y +IK + + H +
Sbjct: 235 LLVGKPPF----------------------ETSCLKETYI-----RIKKNEYSVPRH--I 265
Query: 333 PPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNG-RPFPPLFN 384
P A L R+L P+LR + E FF P RLP PP F+
Sbjct: 266 NPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAP-MRLPTSCLTVPPRFS 317
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 149/311 (47%), Gaps = 60/311 (19%)
Query: 80 MAERVVGTGSFG-IVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM----DHPNVIS 134
++E+++G GS G +VFQ G VA+K++L D + + L ++L+ DHPNVI
Sbjct: 36 VSEKILGYGSSGTVVFQGSF--QGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIR 91
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVL--KHYSSMNQRMPLIYVKLYTY-QIFRGL 191
++ + + D FL + +E + ++ K+ S N ++ Y + QI G+
Sbjct: 92 ----YYCSETTDR-FLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 146
Query: 192 AYIHTVPGVCHRDVKPQNLLVDPLTH------------QVKLCDFGSAKVLVKGEANISY 239
A++H++ + HRD+KPQN+LV + ++ + DFG K L G+
Sbjct: 147 AHLHSLK-IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 205
Query: 240 IC-----SRYYRAPELIFGATE--YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEI 292
+ +RAPEL+ +T+ T SIDI+S GCV +L + P + + I
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY-YILSKGKHPFGDKYSRESNI 264
Query: 293 IKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC 352
I+ G + +E++C++ + + EA DL S+++ + P R
Sbjct: 265 IR--GIFSLDEMKCLH--------------------DRSLIAEATDLISQMIDHDPLKRP 302
Query: 353 TALEACAHPFF 363
TA++ HP F
Sbjct: 303 TAMKVLRHPLF 313
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 149/311 (47%), Gaps = 60/311 (19%)
Query: 80 MAERVVGTGSFG-IVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM----DHPNVIS 134
++E+++G GS G +VFQ G VA+K++L D + + L ++L+ DHPNVI
Sbjct: 36 VSEKILGYGSSGTVVFQGSF--QGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIR 91
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVL--KHYSSMNQRMPLIYVKLYTY-QIFRGL 191
++ + + D FL + +E + ++ K+ S N ++ Y + QI G+
Sbjct: 92 ----YYCSETTDR-FLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 146
Query: 192 AYIHTVPGVCHRDVKPQNLLVDPLTH------------QVKLCDFGSAKVLVKGEANISY 239
A++H++ + HRD+KPQN+LV + ++ + DFG K L G+
Sbjct: 147 AHLHSLK-IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 205
Query: 240 IC-----SRYYRAPELIFGATE--YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEI 292
+ +RAPEL+ +T+ T SIDI+S GCV +L + P + + I
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFY-YILSKGKHPFGDKYSRESNI 264
Query: 293 IKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC 352
I+ G + +E++C++ + + EA DL S+++ + P R
Sbjct: 265 IR--GIFSLDEMKCLH--------------------DRSLIAEATDLISQMIDHDPLKRP 302
Query: 353 TALEACAHPFF 363
TA++ HP F
Sbjct: 303 TAMKVLRHPLF 313
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 24/217 (11%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDH 129
+Y + +G G+F V A+ + TG+ VA+K + D+ N RE+++M++++H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 130 PNVISLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQI 187
PN++ L + E L LVMEY E ++ H RM + QI
Sbjct: 73 PNIVKLFEVI-----ETEKTLYLVMEYASGGEVFDYLVAH-----GRMKEKEARAKFRQI 122
Query: 188 FRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRA 247
+ Y H + HRD+K +NLL+D +K+ DFG + G ++ S Y A
Sbjct: 123 VSAVQYCHQ-KFIVHRDLKAENLLLDA-DMNIKIADFGFSNEFTFGNKLDTFCGSPPYAA 180
Query: 248 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 284
PEL G +D+WS G +L L+ G F G+N
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 24/217 (11%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDH 129
+Y + +G G+F V A+ + TG+ VA+K + D+ N RE+++M++++H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 130 PNVISLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQI 187
PN++ L + E L LVMEY E ++ H RM + QI
Sbjct: 73 PNIVKLFEVI-----ETEKTLYLVMEYASGGEVFDYLVAH-----GRMKEKEARAKFRQI 122
Query: 188 FRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRA 247
+ Y H + HRD+K +NLL+D +K+ DFG + G ++ S Y A
Sbjct: 123 VSAVQYCHQ-KFIVHRDLKAENLLLDA-DMNIKIADFGFSNEFTFGNKLDTFCGSPPYAA 180
Query: 248 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 284
PEL G +D+WS G +L L+ G F G+N
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 29/234 (12%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+++ ++ P + L+ F KD L +VMEY P M+ L+ R +
Sbjct: 94 RILQAVNFPFLTKLEFSF-----KDNSNLYMVMEYAPGGEMFSHLRRIG----RFSEPHA 144
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NL++D + +K+ DFG AK VKG +
Sbjct: 145 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLMIDQQGY-IKVTDFGFAK-RVKGRT--WXL 199
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 200 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 29/234 (12%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+++ ++ P + L+ F KD L +VMEY P M+ L+ R +
Sbjct: 94 RILQAVNFPFLTKLEFSF-----KDNSNLYMVMEYAPGGEMFSHLRRIG----RFSEPHA 144
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NL++D + +K+ DFG AK VKG +
Sbjct: 145 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLMIDQQGY-IKVTDFGFAK-RVKGRT--WXL 199
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 200 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 24/217 (11%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDH 129
+Y + +G G+F V A+ + TG VAIK + D+ N RE+++M++++H
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKII--DKTQLNPTSLQKLFREVRIMKILNH 70
Query: 130 PNVISLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQI 187
PN++ L + E L L+MEY E ++ H RM + QI
Sbjct: 71 PNIVKLFEVI-----ETEKTLYLIMEYASGGEVFDYLVAH-----GRMKEKEARSKFRQI 120
Query: 188 FRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRA 247
+ Y H + HRD+K +NLL+D +K+ DFG + G ++ S Y A
Sbjct: 121 VSAVQYCHQ-KRIVHRDLKAENLLLDA-DMNIKIADFGFSNEFTVGGKLDTFCGSPPYAA 178
Query: 248 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 284
PEL G +D+WS G +L L+ G F G+N
Sbjct: 179 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 215
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 120/234 (51%), Gaps = 29/234 (12%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+++ ++ P ++ L+ F KD L +VMEY P M+ L+ R +
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYAPGGEMFSHLRRIG----RFSEPHA 143
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NL++D + +++ DFG AK VKG +
Sbjct: 144 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLMIDQQGY-IQVTDFGFAK-RVKGRT--WXL 198
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 199 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 120/234 (51%), Gaps = 29/234 (12%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K ETG A+K + + + K ++++
Sbjct: 26 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 85
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+++ ++ P ++ L+ F KD L +VMEYVP M+ L+ R +
Sbjct: 86 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVPGGEMFSHLRRIG----RFXEPHA 136
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NLL+D + +++ DFG AK VKG +
Sbjct: 137 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXL 191
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 192 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 243
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 145/338 (42%), Gaps = 66/338 (19%)
Query: 76 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDH 129
T Y +G G+F +V + L TG A K + +D + RE ++ RL+ H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 130 PNVISLK---------HCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYV 180
N++ L + F + ELF ++V ++YS + +
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR----------EYYSEADASHCI--- 109
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTH--QVKLCDFGSAKVLVKG--EAN 236
QI + + H + GV HRD+KP+NLL+ VKL DFG A + V+G +A
Sbjct: 110 ----QQILEAVLHCHQM-GVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAW 163
Query: 237 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 296
+ + Y +PE + Y +DIW+ G +L LL+G P F E+ +L + IK
Sbjct: 164 FGFAGTPGYLSPE-VLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQ-HKLYQQIKA- 220
Query: 297 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 356
DF P+ W V PEA +L +++L +P+ R TA E
Sbjct: 221 -------------GAYDFPSPE-----WDTV-----TPEAKNLINQMLTINPAKRITAHE 257
Query: 357 ACAHPFFDELREPNARLPNGRPFPPL--FNFKQELAGA 392
A HP+ + + + L FN +++L GA
Sbjct: 258 ALKHPWVCQRSTVASMMHRQETVECLKKFNARRKLKGA 295
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 137/317 (43%), Gaps = 57/317 (17%)
Query: 65 TIGGKNGEPKQTISYMAERV---------VGTGSFGIVFQAKCLETGETVAIK----KVL 111
++ +NGE + AE + +GTG+F V A+ TG+ A+K K L
Sbjct: 1 SMARENGESSSSWKKQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKAL 60
Query: 112 QDRRYK-NRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVL-KH 167
+ + E+ ++R + H N+++L+ + S L LVM+ V E R++ K
Sbjct: 61 KGKESSIENEIAVLRKIKHENIVALEDIYESPN-----HLYLVMQLVSGGELFDRIVEKG 115
Query: 168 YSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKL--CDFG 225
+ + LI Q+ + Y+H + G+ HRD+KP+NLL + K+ DFG
Sbjct: 116 FYTEKDASTLIR------QVLDAVYYLHRM-GIVHRDLKPENLLYYSQDEESKIMISDFG 168
Query: 226 SAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENA 285
+K+ KG+ + + Y APE + Y+ ++D WS G + LL G P F EN
Sbjct: 169 LSKMEGKGDVMSTACGTPGYVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND 227
Query: 286 VDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQ 345
+I+K E +P + D + A D L++
Sbjct: 228 SKLFEQILKA-------EYEFDSPYWDD------------------ISDSAKDFIRNLME 262
Query: 346 YSPSLRCTALEACAHPF 362
P+ R T +A HP+
Sbjct: 263 KDPNKRYTCEQAARHPW 279
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 29/234 (12%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+++ ++ P + L+ F KD L +VMEY P M+ L+ R +
Sbjct: 94 RILQAVNFPFLTKLEFSF-----KDNSNLYMVMEYAPGGEMFSHLRRIG----RFXEPHA 144
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NL++D + +K+ DFG AK VKG +
Sbjct: 145 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLMIDQQGY-IKVTDFGFAK-RVKGRT--WXL 199
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 200 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 118/234 (50%), Gaps = 29/234 (12%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + R +GTGSFG V K ETG A+K + + + K ++++
Sbjct: 34 PAQNTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+ + ++ P ++ L+ F KD L +V+EY P M+ L+ R +
Sbjct: 94 RIQQAVNFPFLVKLEFSF-----KDNSNLYMVLEYAPGGEMFSHLRRIG----RFSEPHA 144
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NLL+D + +K+ DFG AK VKG +
Sbjct: 145 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IKVADFGFAK-RVKGRT--WXL 199
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 200 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 136/322 (42%), Gaps = 50/322 (15%)
Query: 72 EPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLM 124
+P+ YM R +G G F ++ ++T E A K V + K + E+ +
Sbjct: 21 DPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIH 80
Query: 125 RLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYT 184
+ +D+P+V+ H FF +D+ F+ +V+E R L + + + +
Sbjct: 81 KSLDNPHVVGF-HGFF----EDDDFVYVVLEICRR---RSLLELHKRRKAVTEPEARYFM 132
Query: 185 YQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSA-KVLVKGEANISYICSR 243
Q +G+ Y+H V HRD+K NL ++ VK+ DFG A K+ GE +
Sbjct: 133 RQTIQGVQYLHN-NRVIHRDLKLGNLFLND-DMDVKIGDFGLATKIEFDGERKKDLCGTP 190
Query: 244 YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE 303
Y APE + ++ +DIWS GC+L LL+G+P F E
Sbjct: 191 NYIAPE-VLCKKGHSFEVDIWSLGCILYTLLVGKPPF----------------------E 227
Query: 304 IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
C+ Y +IK + + H + P A L R+L P+LR + E FF
Sbjct: 228 TSCLKETYI-----RIKKNEYSVPRH--INPVASALIRRMLHADPTLRPSVAELLTDEFF 280
Query: 364 DELREPNARLPNG-RPFPPLFN 384
P RLP PP F+
Sbjct: 281 TSGYAP-MRLPTSCLTVPPRFS 301
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 132/299 (44%), Gaps = 60/299 (20%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKV-------LQDRRYKNRELQLMRLMDHPNVISL 135
R +GTGSFG V + G A+K + L+ + N E ++ ++ HP +I +
Sbjct: 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM 71
Query: 136 KHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F +D + ++M+Y+ ++ +L+ +QR P K Y ++ L Y+
Sbjct: 72 WGTF-----QDAQQIFMIMDYIEGGELFSLLRK----SQRFPNPVAKFYAAEVCLALEYL 122
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISY-ICSR-YYRAPELIF 252
H+ + +RD+KP+N+L+D H +K+ DFG AK + +++Y +C Y APE++
Sbjct: 123 HS-KDIIYRDLKPENILLDKNGH-IKITDFGFAKYV----PDVTYXLCGTPDYIAPEVV- 175
Query: 253 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 312
Y SID WS G ++ E+L G F N + +I+
Sbjct: 176 STKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILN-----------------A 218
Query: 313 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA-----HPFFDEL 366
+ RFP + DL SRL+ S R L+ HP+F E+
Sbjct: 219 ELRFPPF------------FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV 265
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 119/234 (50%), Gaps = 29/234 (12%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K ETG A+K + + + K ++++
Sbjct: 34 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK 93
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+++ ++ P ++ L+ F KD L +VMEY P M+ L+ R +
Sbjct: 94 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYAPGGEMFSHLRRIG----RFSEPHA 144
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NL++D + +K+ DFG AK VKG +
Sbjct: 145 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLMIDQQGY-IKVTDFGFAK-RVKGRT--WXL 199
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 200 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 144/312 (46%), Gaps = 49/312 (15%)
Query: 70 NGEPKQTI-SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL-----QL 123
G+P+ + SY+ +G GS GIV A+ +G VA+K ++ R+ + REL +
Sbjct: 40 QGDPRLLLDSYVK---IGEGSTGIVCLAREKHSGRQVAVK-MMDLRKQQRRELLFNEVVI 95
Query: 124 MRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLY 183
MR H NV+ + + S +EL++ +ME++ + +N+ +
Sbjct: 96 MRDYQHFNVVEM---YKSYLVGEELWV--LMEFLQGGALTDIVSQVRLNEEQ----IATV 146
Query: 184 TYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG-SAKVLVKGEANISYICS 242
+ + LAY+H GV HRD+K ++L+ L +VKL DFG A++ + +
Sbjct: 147 CEAVLQALAYLHA-QGVIHRDIKSDSILL-TLDGRVKLSDFGFCAQISKDVPKRKXLVGT 204
Query: 243 RYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 302
Y+ APE+I + Y T +DIWS G ++ E++ G+P + ++ V + +
Sbjct: 205 PYWMAPEVI-SRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM------------K 251
Query: 303 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
+R P P++K HKV P D R+L P R TA E HPF
Sbjct: 252 RLRDSPP-------PKLKNS--HKV-----SPVLRDFLERMLVRDPQERATAQELLDHPF 297
Query: 363 FDELREPNARLP 374
+ P +P
Sbjct: 298 LLQTGLPECLVP 309
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 131/291 (45%), Gaps = 53/291 (18%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-------NRELQLMRLMDHPNVISLK 136
++G GSF V++A+ + TG VAIK + + YK E+++ + HP+++ L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 137 HCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIY--VKLYTYQIFRGLAY 193
+ F +D ++ LV+E M R LK N+ P + + +QI G+ Y
Sbjct: 78 NYF-----EDSNYVYLVLEMCHNGEMNRYLK-----NRVKPFSENEARHFMHQIITGMLY 127
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-VKGEANISYICSRYYRAPELIF 252
+H+ G+ HRD+ NLL+ +K+ DFG A L + E + + + Y +PE I
Sbjct: 128 LHS-HGILHRDLTLSNLLLTR-NMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPE-IA 184
Query: 253 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 312
+ + D+WS GC+ LL+G+P F + + L +++
Sbjct: 185 TRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV-----------------LA 227
Query: 313 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
D+ P + EA DL +LL+ +P+ R + HPF
Sbjct: 228 DYEMPSF------------LSIEAKDLIHQLLRRNPADRLSLSSVLDHPFM 266
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 120/234 (51%), Gaps = 29/234 (12%)
Query: 73 PKQTISYMAE----RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
P Q +++ + + +GTGSFG V K +ETG A+K + + + K ++++
Sbjct: 33 PAQNTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEK 92
Query: 123 -LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
+++ ++ P ++ L+ F KD L +VMEYV M+ L+ R +
Sbjct: 93 RILQAVNFPFLVKLEFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHA 143
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
+ Y QI Y+H++ + +RD+KP+NLL+D + +++ DFG AK VKG +
Sbjct: 144 RFYAAQIVLTFEYLHSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXL 198
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
C Y APE+I + Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 199 CGTPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 24/217 (11%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDH 129
+Y + +G G+F V A+ + TG+ VA++ + D+ N RE+++M++++H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRII--DKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 130 PNVISLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQI 187
PN++ L + E L LVMEY E ++ H RM + QI
Sbjct: 73 PNIVKLFEVI-----ETEKTLYLVMEYASGGEVFDYLVAH-----GRMKEKEARAKFRQI 122
Query: 188 FRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRA 247
+ Y H + HRD+K +NLL+D +K+ DFG + G ++ S Y A
Sbjct: 123 VSAVQYCHQ-KFIVHRDLKAENLLLDA-DMNIKIADFGFSNEFTFGNKLDTFCGSPPYAA 180
Query: 248 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 284
PEL G +D+WS G +L L+ G F G+N
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 104/216 (48%), Gaps = 22/216 (10%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDH 129
+Y + +G G+F V A+ + TG+ VA+K + D+ N RE+++M++++H
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNH 65
Query: 130 PNVISLKHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIF 188
PN++ L + E L LVMEY ++ L + M ++ + QI
Sbjct: 66 PNIVKLFEVI-----ETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR----QIV 116
Query: 189 RGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAP 248
+ Y H + HRD+K +NLL+D +K+ DFG + G ++ S Y AP
Sbjct: 117 SAVQYCHQ-KFIVHRDLKAENLLLDA-DMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAP 174
Query: 249 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 284
EL G +D+WS G +L L+ G F G+N
Sbjct: 175 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 210
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 24/217 (11%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDH 129
+Y + +G G+F V A+ + TG+ VA+K + D+ N RE+++M++++H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 130 PNVISLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQI 187
PN++ L + E L LVMEY E ++ H RM + QI
Sbjct: 73 PNIVKLFEVI-----ETEKTLYLVMEYASGGEVFDYLVAH-----GRMKEKEARAKFRQI 122
Query: 188 FRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRA 247
+ Y H + HRD+K +NLL+D +K+ DFG + G ++ + Y A
Sbjct: 123 VSAVQYCHQ-KFIVHRDLKAENLLLDA-DMNIKIADFGFSNEFTFGNKLDAFCGAPPYAA 180
Query: 248 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 284
PEL G +D+WS G +L L+ G F G+N
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 129/293 (44%), Gaps = 48/293 (16%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNV 132
Y +GTG F V A + TGE VAIK + ++ R K E++ ++ + H ++
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKT-EIEALKNLRHQHI 70
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
L H + +++F+ V+EY P L Y R+ ++ QI +A
Sbjct: 71 CQLYHVL---ETANKIFM--VLEYCPGGE---LFDYIISQDRLSEEETRVVFRQIVSAVA 122
Query: 193 YIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG-SAKVLVKGEANISYIC-SRYYRAPEL 250
Y+H+ G HRD+KP+NLL D H++KL DFG AK + ++ C S Y APEL
Sbjct: 123 YVHS-QGYAHRDLKPENLLFDEY-HKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPEL 180
Query: 251 IFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 310
I G + + D+WS G +L L+ G F +N + +I++
Sbjct: 181 IQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMR---------------- 224
Query: 311 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
+ P K + P +I L ++LQ P R + HP+
Sbjct: 225 -GKYDVP------------KWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWI 264
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 24/217 (11%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDH 129
+Y + +G G+F V A+ + TG+ VA++ + D+ N RE+++M++++H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRII--DKTQLNSSSLQKLFREVRIMKVLNH 72
Query: 130 PNVISLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQI 187
PN++ L + E L LVMEY E ++ H RM + QI
Sbjct: 73 PNIVKLFEVI-----ETEKTLYLVMEYASGGEVFDYLVAH-----GRMKEKEARAKFRQI 122
Query: 188 FRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRA 247
+ Y H + HRD+K +NLL+D +K+ DFG + G + S Y A
Sbjct: 123 VSAVQYCHQ-KFIVHRDLKAENLLLDA-DMNIKIADFGFSNEFTFGNKLDEFCGSPPYAA 180
Query: 248 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 284
PEL G +D+WS G +L L+ G F G+N
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 24/217 (11%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDH 129
+Y + +G G+F V A+ + TG VAIK + D+ N RE+++M++++H
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKII--DKTQLNPTSLQKLFREVRIMKILNH 73
Query: 130 PNVISLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQI 187
PN++ L + E L L+MEY E ++ H RM + QI
Sbjct: 74 PNIVKLFEVI-----ETEKTLYLIMEYASGGEVFDYLVAH-----GRMKEKEARSKFRQI 123
Query: 188 FRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRA 247
+ Y H + HRD+K +NLL+D +K+ DFG + G ++ + Y A
Sbjct: 124 VSAVQYCHQ-KRIVHRDLKAENLLLDA-DMNIKIADFGFSNEFTVGGKLDAFCGAPPYAA 181
Query: 248 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 284
PEL G +D+WS G +L L+ G F G+N
Sbjct: 182 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 125/290 (43%), Gaps = 48/290 (16%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIK----KVLQDRRYK-NRELQLMRLMDHPNVISLKHC 138
V+GTG+F V A+ T + VAIK K L+ + E+ ++ + HPN+++L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 139 FFSTTSKDELFLNLVMEYVP--ETMYRVL-KHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
+ S L L+M+ V E R++ K + + LI+ Q+ + Y+H
Sbjct: 85 YESGGH-----LYLIMQLVSGGELFDRIVEKGFYTERDASRLIF------QVLDAVKYLH 133
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKL--CDFGSAKVLVKGEANISYICSRYYRAPELIFG 253
+ G+ HRD+KP+NLL L K+ DFG +K+ G + + Y APE +
Sbjct: 134 DL-GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE-VLA 191
Query: 254 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTD 313
Y+ ++D WS G + LL G P F EN +I+K E +P + D
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA-------EYEFDSPYWDD 244
Query: 314 FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
+ A D L++ P R T +A HP+
Sbjct: 245 ------------------ISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 106/222 (47%), Gaps = 24/222 (10%)
Query: 83 RVVGTGSFGIVFQAK--------CLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVIS 134
+V+G GSFG V A+ ++ + AI K +++ + L++ + HP ++
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 135 LKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
L FS + D+L+ V++Y+ E Y + + + R + Y +I L
Sbjct: 104 LH---FSFQTADKLYF--VLDYINGGELFYHLQRERCFLEPR-----ARFYAAEIASALG 153
Query: 193 YIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPELI 251
Y+H++ + +RD+KP+N+L+D H V L DFG K ++ + S C Y APE +
Sbjct: 154 YLHSL-NIVYRDLKPENILLDSQGHIV-LTDFGLCKENIEHNSTTSTFCGTPEYLAPE-V 210
Query: 252 FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
Y ++D W G VL E+L G P F N + I+
Sbjct: 211 LHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL 252
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 105/227 (46%), Gaps = 19/227 (8%)
Query: 67 GGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------- 118
G K+ + Y+ +G G+FG V + TG VA+K +L ++ ++
Sbjct: 1 GSKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVK-ILNRQKIRSLDVVGKIK 59
Query: 119 RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
RE+Q ++L HP++I L + T +VMEYV L Y + R+ +
Sbjct: 60 REIQNLKLFRHPHIIKLYQVISTPTD-----FFMVMEYVSGGE---LFDYICKHGRVEEM 111
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+ QI + Y H V HRD+KP+N+L+D K+ DFG + ++ GE +
Sbjct: 112 EARRLFQQILSAVDYCHR-HMVVHRDLKPENVLLDAHM-NAKIADFGLSNMMSDGEFLRT 169
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENA 285
S Y APE+I G +DIWS G +L LL G F E+
Sbjct: 170 SCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV 216
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 138/296 (46%), Gaps = 45/296 (15%)
Query: 77 ISYMAERVVGTGSFGIVFQAKCLE-TGETVAIKKVLQDRRYKNRELQLMR-LMDHPNVIS 134
+S + R V + G F K +E T E ++ +++ + R RE ++R + HP++I+
Sbjct: 106 VSSVVRRCVHRAT-GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIIT 164
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L + S++ F+ LV + + + ++ L +++++ + + +++
Sbjct: 165 LIDSYESSS-----FMFLVFDLMRKGELFDYLTEKVALSEK----ETRSIMRSLLEAVSF 215
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFG 253
+H + HRD+KP+N+L+D Q++L DFG + L GE + Y APE++
Sbjct: 216 LH-ANNIVHRDLKPENILLDD-NMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKC 273
Query: 254 ATE-----YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 308
+ + Y +D+W+ G +L LL G P F + L I++ + + +
Sbjct: 274 SMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIME-------GQYQFSS 326
Query: 309 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD 364
P + D R +K DL SRLLQ P R TA +A HPFF+
Sbjct: 327 PEWDD-RSSTVK-----------------DLISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 153/359 (42%), Gaps = 81/359 (22%)
Query: 73 PKQTISYMAERVVGTGSFGIVFQAKC-LETG--ETVAIKKVLQDRR--YKNRELQLMRLM 127
P+ + + E +G G+F V+ A L+ G E +A+K ++ ELQ + +
Sbjct: 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVA 76
Query: 128 D-HPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIY--VKLYT 184
NV+ +K+CF + + + M Y L+H S ++ L + V+ Y
Sbjct: 77 GGQDNVMGVKYCF-----RKNDHVVIAMPY--------LEHESFLDILNSLSFQEVREYM 123
Query: 185 YQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK----------VLVKGE 234
+F+ L IH G+ HRDVKP N L + + L DFG A+ V+ E
Sbjct: 124 LNLFKALKRIHQF-GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSE 182
Query: 235 A-------NISYIC-SRY-----------YRAPELIFGATEYTTSIDIWSAGCVLAELLL 275
A N IC SR +RAPE++ TT+ID+WSAG + LL
Sbjct: 183 AQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLS 242
Query: 276 GQ-PLFPGENAVDQLVEIIKVLGTPTREEIR-----------------------CMNPNY 311
G+ P + + + L +I+ + G +RE I+ C
Sbjct: 243 GRYPFYKASDDLTALAQIMTIRG--SRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRG 300
Query: 312 TDFRFPQ----IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 366
D P+ I+ H + +P EA DL +LL +P+ R TA EA HPFF ++
Sbjct: 301 MDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDM 359
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 134/325 (41%), Gaps = 43/325 (13%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK---NRELQLMRLMDHPNVISLKHCFFS 141
+G+G+FG+ + ++ E VA+K + + + RE+ R + HPN++ K +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILT 86
Query: 142 TTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
T L +VMEY E R+ R + + Q+ G++Y H +
Sbjct: 87 PTH-----LAIVMEYASGGELFERICN-----AGRFSEDEARFFFQQLISGVSYCHAM-Q 135
Query: 200 VCHRDVKPQNLLVDPL-THQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYT 258
VCHRD+K +N L+D ++K+CDFG +K V S + + Y APE++
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDG 195
Query: 259 TSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQ 318
D+WS G L +L+G F + I R +N Y +
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH----------RILNVQYAIPDYVH 245
Query: 319 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 378
I PE L SR+ P+ R + E H +F L+ A L N
Sbjct: 246 IS-------------PECRHLISRIFVADPAKRISIPEIRNHEWF--LKNLPADLMNDNT 290
Query: 379 FPPLFNFKQELAGASPELINRLIPE 403
F+ + + G S E I ++I E
Sbjct: 291 MTTQFD-ESDQPGQSIEEIMQIIAE 314
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 148/328 (45%), Gaps = 62/328 (18%)
Query: 83 RVVGTGSFGIVFQAKCL---ETGETVAIK--------KVLQDRRYKNRELQLMRLMDHPN 131
RV+G G +G VFQ + + TG+ A+K + +D + E ++ + HP
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 132 VISLKHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRG 190
++ L + F T K L L++EY+ ++ L+ + Y+ +I
Sbjct: 83 IVDLIYAF-QTGGK----LYLILEYLSGGELFMQLEREGIFMEDTACFYLA----EISMA 133
Query: 191 LAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV-KGEANISYICSRYYRAPE 249
L ++H G+ +RD+KP+N++++ H VKL DFG K + G ++ + Y APE
Sbjct: 134 LGHLHQ-KGIIYRDLKPENIMLNHQGH-VKLTDFGLCKESIHDGTVTHTFCGTIEYMAPE 191
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
++ + + ++D WS G ++ ++L G P F GEN + +I+K
Sbjct: 192 ILM-RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC-------------- 236
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFD 364
++ P+ + EA DL +LL+ + + R A E AHPFF
Sbjct: 237 --------KLNLPPY-------LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFR 281
Query: 365 EL--REPNARLPNGRPFPPLFNFKQELA 390
+ E AR PF PL +++++
Sbjct: 282 HINWEELLARKVE-PPFKPLLQSEEDVS 308
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 104/227 (45%), Gaps = 19/227 (8%)
Query: 67 GGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------- 118
G K+ + Y+ +G G+FG V + TG VA+K +L ++ ++
Sbjct: 1 GSKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVK-ILNRQKIRSLDVVGKIK 59
Query: 119 RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
RE+Q ++L HP++I L + T +VMEYV L Y + R+ +
Sbjct: 60 REIQNLKLFRHPHIIKLYQVISTPTD-----FFMVMEYVSGGE---LFDYICKHGRVEEM 111
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+ QI + Y H V HRD+KP+N+L+D K+ DFG + ++ GE
Sbjct: 112 EARRLFQQILSAVDYCHR-HMVVHRDLKPENVLLDAHM-NAKIADFGLSNMMSDGEFLRD 169
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENA 285
S Y APE+I G +DIWS G +L LL G F E+
Sbjct: 170 SCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV 216
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 34/211 (16%)
Query: 83 RVVGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVIS 134
R +G G+FG V + TGE VA+KK+ R RE+++++ + H N++
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQIFRGLAY 193
K +S ++ L L+ME++P Y L+ Y +R+ I + YT QI +G+ Y
Sbjct: 79 YKGVCYSAGRRN---LKLIMEFLP---YGSLREYLQKHKERIDHIKLLQYTSQICKGMEY 132
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL--------VK--GEANISYICSR 243
+ T + HRD+ +N+LV+ ++VK+ DFG KVL VK GE+ I
Sbjct: 133 LGTKRYI-HRDLATRNILVEN-ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------ 184
Query: 244 YYRAPELIFGATEYTTSIDIWSAGCVLAELL 274
++ APE + ++++ + D+WS G VL EL
Sbjct: 185 FWYAPESL-TESKFSVASDVWSFGVVLYELF 214
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 114/219 (52%), Gaps = 23/219 (10%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
+ F KD L +VMEYV M+ L+ R + + Y QI Y+
Sbjct: 128 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYL 178
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H++ + +RD+KP+NLL+D + +++ DFG AK VKG A + + Y APE+I +
Sbjct: 179 HSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKG-ATWTLCGTPEYLAPEIIL-S 233
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 234 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 271
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 112/230 (48%), Gaps = 27/230 (11%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ-------DRRYKNRELQLMRLMDHP 130
Y +V+G G+FG V + T + A+K + + D + E +M + P
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
V+ L + F +D+ +L +VMEY+P + ++ +Y +P + + YT ++
Sbjct: 135 WVVQLFYAF-----QDDRYLYMVMEYMPGGDLVNLMSNYD-----VPEKWARFYTAEVVL 184
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI---SYICSRYYR 246
L IH++ G HRDVKP N+L+D H +KL DFG+ + K E + + + + Y
Sbjct: 185 ALDAIHSM-GFIHRDVKPDNMLLDKSGH-LKLADFGTCMKMNK-EGMVRCDTAVGTPDYI 241
Query: 247 APELI---FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+PE++ G Y D WS G L E+L+G F ++ V +I+
Sbjct: 242 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 104/210 (49%), Gaps = 29/210 (13%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVL----QDRRYKNRELQLMRLMDHPNVISLKHCF 139
V+G G FG + ETGE + +K+++ + +R +E+++MR ++HPNV+ F
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLK----F 72
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
KD+ LN + EY+ R + SM+ + P + I G+AY+H++
Sbjct: 73 IGVLYKDKR-LNFITEYIKGGTLRGI--IKSMDSQYPWSQRVSFAKDIASGMAYLHSM-N 128
Query: 200 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEAN---------------ISYICSRY 244
+ HRD+ N LV V + DFG A+++V + + + + Y
Sbjct: 129 IIHRDLNSHNCLVRE-NKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPY 187
Query: 245 YRAPELIFGATEYTTSIDIWSAGCVLAELL 274
+ APE+I G + Y +D++S G VL E++
Sbjct: 188 WMAPEMINGRS-YDEKVDVFSFGIVLCEII 216
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 149/315 (47%), Gaps = 64/315 (20%)
Query: 80 MAERVVGTGSFG-IVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM----DHPNVIS 134
++E+++G GS G +VFQ G VA+K++L D + + L ++L+ DHPNVI
Sbjct: 18 VSEKILGYGSSGTVVFQGSF--QGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIR 73
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVL--KHYSSMNQRMPLIYVKLYTY-QIFRGL 191
++ + + D FL + +E + ++ K+ S N ++ Y + QI G+
Sbjct: 74 ----YYCSETTDR-FLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 128
Query: 192 AYIHTVPGVCHRDVKPQNLLVDPLTH------------QVKLCDFGSAKVLVKGEANISY 239
A++H++ + HRD+KPQN+LV + ++ + DFG K L G+++
Sbjct: 129 AHLHSLK-IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRT 187
Query: 240 IC-----SRYYRAPELIFGATEYTT------SIDIWSAGCVLAELLLGQPLFPGENAVDQ 288
+ +RAPEL+ + T SIDI+S GCV +L + P + +
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY-YILSKGKHPFGDKYSR 246
Query: 289 LVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSP 348
II+ G + +E++C++ + + EA DL S+++ + P
Sbjct: 247 ESNIIR--GIFSLDEMKCLH--------------------DRSLIAEATDLISQMIDHDP 284
Query: 349 SLRCTALEACAHPFF 363
R TA++ HP F
Sbjct: 285 LKRPTAMKVLRHPLF 299
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 110/209 (52%), Gaps = 34/209 (16%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TGE VA+KK+ R RE+++++ + H N++ K
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQIFRGLAYIH 195
+S ++ L L+MEY+P Y L+ Y +R+ I + YT QI +G+ Y+
Sbjct: 85 GVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 138
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL--------VK--GEANISYICSRYY 245
T + HRD+ +N+LV+ ++VK+ DFG KVL VK GE+ I ++
Sbjct: 139 TKRYI-HRDLATRNILVEN-ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------FW 190
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELL 274
APE + ++++ + D+WS G VL EL
Sbjct: 191 YAPESL-TESKFSVASDVWSFGVVLYELF 218
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 112/230 (48%), Gaps = 27/230 (11%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ-------DRRYKNRELQLMRLMDHP 130
Y +V+G G+FG V + T + A+K + + D + E +M + P
Sbjct: 70 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 129
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
V+ L + F +D+ +L +VMEY+P + ++ +Y +P + + YT ++
Sbjct: 130 WVVQLFYAF-----QDDRYLYMVMEYMPGGDLVNLMSNYD-----VPEKWARFYTAEVVL 179
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI---SYICSRYYR 246
L IH++ G HRDVKP N+L+D H +KL DFG+ + K E + + + + Y
Sbjct: 180 ALDAIHSM-GFIHRDVKPDNMLLDKSGH-LKLADFGTCMKMNK-EGMVRCDTAVGTPDYI 236
Query: 247 APELI---FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+PE++ G Y D WS G L E+L+G F ++ V +I+
Sbjct: 237 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 286
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 110/209 (52%), Gaps = 34/209 (16%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TGE VA+KK+ R RE+++++ + H N++ K
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQIFRGLAYIH 195
+S ++ L L+MEY+P Y L+ Y +R+ I + YT QI +G+ Y+
Sbjct: 83 GVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 136
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL--------VK--GEANISYICSRYY 245
T + HRD+ +N+LV+ ++VK+ DFG KVL VK GE+ I ++
Sbjct: 137 TKRYI-HRDLATRNILVEN-ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------FW 188
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELL 274
APE + ++++ + D+WS G VL EL
Sbjct: 189 YAPESL-TESKFSVASDVWSFGVVLYELF 216
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 139/303 (45%), Gaps = 48/303 (15%)
Query: 70 NGEPKQTIS--YMAERVVGTGSFGIVFQAKCLETGETVAIK--KVLQDRRYKNRELQLMR 125
+G + +S + E +G G+ IV++ K T + A+K K D++ E+ ++
Sbjct: 44 DGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLL 103
Query: 126 LMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVL-KHYSSMNQRMPLIYVKL 182
+ HPN+I LK F + T ++LV+E V E R++ K Y S +R VK
Sbjct: 104 RLSHPNIIKLKEIFETPTE-----ISLVLELVTGGELFDRIVEKGYYS--ERDAADAVK- 155
Query: 183 YTYQIFRGLAYIHTVPGVCHRDVKPQNLL-VDPLTHQ-VKLCDFGSAKVLVKGEANISYI 240
QI +AY+H G+ HRD+KP+NLL P +K+ DFG +K+ V+ + + +
Sbjct: 156 ---QILEAVAYLHE-NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKI-VEHQVLMKTV 210
Query: 241 CSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 299
C Y APE++ G Y +D+WS G + LL G F E DQ +
Sbjct: 211 CGTPGYCAPEILRGCA-YGPEVDMWSVGIITYILLCGFEPFYDERG-DQFM--------- 259
Query: 300 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 359
R + C ++ F PW + A DL +L+ P R T +A
Sbjct: 260 FRRILNC------EYYF----ISPW----WDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305
Query: 360 HPF 362
HP+
Sbjct: 306 HPW 308
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 109/209 (52%), Gaps = 34/209 (16%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TGE VA+KK+ R RE+++++ + H N++ K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQIFRGLAYIH 195
+S ++ L L+MEY+P Y L+ Y +R+ I + YT QI +G+ Y+
Sbjct: 81 GVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 134
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK----------GEANISYICSRYY 245
T + HRD+ +N+LV+ ++VK+ DFG KVL + GE+ I ++
Sbjct: 135 TKRYI-HRDLATRNILVEN-ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------FW 186
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELL 274
APE + ++++ + D+WS G VL EL
Sbjct: 187 YAPESL-TESKFSVASDVWSFGVVLYELF 214
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 110/209 (52%), Gaps = 34/209 (16%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TGE VA+KK+ R RE+++++ + H N++ K
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQIFRGLAYIH 195
+S ++ L L+MEY+P Y L+ Y +R+ I + YT QI +G+ Y+
Sbjct: 84 GVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 137
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL--------VK--GEANISYICSRYY 245
T + HRD+ +N+LV+ ++VK+ DFG KVL VK GE+ I ++
Sbjct: 138 TKRYI-HRDLATRNILVEN-ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------FW 189
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELL 274
APE + ++++ + D+WS G VL EL
Sbjct: 190 YAPESL-TESKFSVASDVWSFGVVLYELF 217
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 109/209 (52%), Gaps = 34/209 (16%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TGE VA+KK+ R RE+++++ + H N++ K
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQIFRGLAYIH 195
+S ++ L L+MEY+P Y L+ Y +R+ I + YT QI +G+ Y+
Sbjct: 109 GVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 162
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK----------GEANISYICSRYY 245
T + HRD+ +N+LV+ ++VK+ DFG KVL + GE+ I ++
Sbjct: 163 TKRYI-HRDLATRNILVEN-ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------FW 214
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELL 274
APE + ++++ + D+WS G VL EL
Sbjct: 215 YAPESL-TESKFSVASDVWSFGVVLYELF 242
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 111/209 (53%), Gaps = 34/209 (16%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TGE VA+KK+ R RE+++++ + H N++ K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQIFRGLAYIH 195
+S ++ L L+MEY+P Y L+ Y + +R+ I + YT QI +G+ Y+
Sbjct: 81 GVCYSAGRRN---LKLIMEYLP---YGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLG 134
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL--------VK--GEANISYICSRYY 245
T + HRD+ +N+LV+ ++VK+ DFG KVL VK GE+ I ++
Sbjct: 135 TKRYI-HRDLATRNILVEN-ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------FW 186
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELL 274
APE + ++++ + D+WS G VL EL
Sbjct: 187 YAPESL-TESKFSVASDVWSFGVVLYELF 214
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 112/230 (48%), Gaps = 27/230 (11%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ-------DRRYKNRELQLMRLMDHP 130
Y +V+G G+FG V + T + A+K + + D + E +M + P
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
V+ L + F +D+ +L +VMEY+P + ++ +Y +P + + YT ++
Sbjct: 135 WVVQLFYAF-----QDDRYLYMVMEYMPGGDLVNLMSNYD-----VPEKWARFYTAEVVL 184
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI---SYICSRYYR 246
L IH++ G HRDVKP N+L+D H +KL DFG+ + K E + + + + Y
Sbjct: 185 ALDAIHSM-GFIHRDVKPDNMLLDKSGH-LKLADFGTCMKMNK-EGMVRCDTAVGTPDYI 241
Query: 247 APELI---FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+PE++ G Y D WS G L E+L+G F ++ V +I+
Sbjct: 242 SPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 109/209 (52%), Gaps = 34/209 (16%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TGE VA+KK+ R RE+++++ + H N++ K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQIFRGLAYIH 195
+S ++ L L+MEY+P Y L+ Y +R+ I + YT QI +G+ Y+
Sbjct: 78 GVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK----------GEANISYICSRYY 245
T + HRD+ +N+LV+ ++VK+ DFG KVL + GE+ I ++
Sbjct: 132 TKRYI-HRDLATRNILVEN-ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------FW 183
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELL 274
APE + ++++ + D+WS G VL EL
Sbjct: 184 YAPESL-TESKFSVASDVWSFGVVLYELF 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 109/209 (52%), Gaps = 34/209 (16%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TGE VA+KK+ R RE+++++ + H N++ K
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQIFRGLAYIH 195
+S ++ L L+MEY+P Y L+ Y +R+ I + YT QI +G+ Y+
Sbjct: 82 GVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 135
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK----------GEANISYICSRYY 245
T + HRD+ +N+LV+ ++VK+ DFG KVL + GE+ I ++
Sbjct: 136 TKRYI-HRDLATRNILVEN-ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------FW 187
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELL 274
APE + ++++ + D+WS G VL EL
Sbjct: 188 YAPESL-TESKFSVASDVWSFGVVLYELF 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 110/209 (52%), Gaps = 34/209 (16%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TGE VA+KK+ R RE+++++ + H N++ K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQIFRGLAYIH 195
+S ++ L L+MEY+P Y L+ Y +R+ I + YT QI +G+ Y+
Sbjct: 78 GVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL--------VK--GEANISYICSRYY 245
T + HRD+ +N+LV+ ++VK+ DFG KVL VK GE+ I ++
Sbjct: 132 TKRYI-HRDLATRNILVEN-ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------FW 183
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELL 274
APE + ++++ + D+WS G VL EL
Sbjct: 184 YAPESL-TESKFSVASDVWSFGVVLYELF 211
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 110/209 (52%), Gaps = 34/209 (16%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TGE VA+KK+ R RE+++++ + H N++ K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQIFRGLAYIH 195
+S ++ L L+MEY+P Y L+ Y +R+ I + YT QI +G+ Y+
Sbjct: 96 GVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 149
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL--------VK--GEANISYICSRYY 245
T + HRD+ +N+LV+ ++VK+ DFG KVL VK GE+ I ++
Sbjct: 150 TKRYI-HRDLATRNILVEN-ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------FW 201
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELL 274
APE + ++++ + D+WS G VL EL
Sbjct: 202 YAPESL-TESKFSVASDVWSFGVVLYELF 229
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 110/209 (52%), Gaps = 34/209 (16%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TGE VA+KK+ R RE+++++ + H N++ K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQIFRGLAYIH 195
+S ++ L L+MEY+P Y L+ Y +R+ I + YT QI +G+ Y+
Sbjct: 96 GVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 149
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL--------VK--GEANISYICSRYY 245
T + HRD+ +N+LV+ ++VK+ DFG KVL VK GE+ I ++
Sbjct: 150 TKRYI-HRDLATRNILVEN-ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------FW 201
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELL 274
APE + ++++ + D+WS G VL EL
Sbjct: 202 YAPESL-TESKFSVASDVWSFGVVLYELF 229
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 110/209 (52%), Gaps = 34/209 (16%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TGE VA+KK+ R RE+++++ + H N++ K
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQIFRGLAYIH 195
+S ++ L L+MEY+P Y L+ Y +R+ I + YT QI +G+ Y+
Sbjct: 78 GVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL--------VK--GEANISYICSRYY 245
T + HRD+ +N+LV+ ++VK+ DFG KVL VK GE+ I ++
Sbjct: 132 TKRYI-HRDLATRNILVEN-ENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI------FW 183
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELL 274
APE + ++++ + D+WS G VL EL
Sbjct: 184 YAPESL-TESKFSVASDVWSFGVVLYELF 211
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 110/209 (52%), Gaps = 34/209 (16%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TGE VA+KK+ R RE+++++ + H N++ K
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQIFRGLAYIH 195
+S ++ L L+MEY+P Y L+ Y +R+ I + YT QI +G+ Y+
Sbjct: 77 GVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 130
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL--------VK--GEANISYICSRYY 245
T + HRD+ +N+LV+ ++VK+ DFG KVL VK GE+ I ++
Sbjct: 131 TKRYI-HRDLATRNILVEN-ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------FW 182
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELL 274
APE + ++++ + D+WS G VL EL
Sbjct: 183 YAPESL-TESKFSVASDVWSFGVVLYELF 210
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 109/209 (52%), Gaps = 34/209 (16%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TGE VA+KK+ R RE+++++ + H N++ K
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQIFRGLAYIH 195
+S ++ L L+MEY+P Y L+ Y +R+ I + YT QI +G+ Y+
Sbjct: 76 GVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 129
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK----------GEANISYICSRYY 245
T + HRD+ +N+LV+ ++VK+ DFG KVL + GE+ I ++
Sbjct: 130 TKRYI-HRDLATRNILVEN-ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------FW 181
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELL 274
APE + ++++ + D+WS G VL EL
Sbjct: 182 YAPESL-TESKFSVASDVWSFGVVLYELF 209
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 135/303 (44%), Gaps = 47/303 (15%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVL----QDRRYKNRELQLMRLMDHPNVISLKHCFF 140
+GTG+FG+V + TG A K V+ D+ +E+Q M ++ HP +++L F
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF- 117
Query: 141 STTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+D+ + ++ E++ E +V ++ M++ + Y++ Q+ +GL ++H
Sbjct: 118 ----EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR----QVCKGLCHMHE-N 168
Query: 199 GVCHRDVKPQNLL-VDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA-TE 256
H D+KP+N++ ++++KL DFG L ++ + + APE+ G
Sbjct: 169 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVG 228
Query: 257 YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRF 316
Y T D+WS G + LL G F GEN + L ++ + N D F
Sbjct: 229 YYT--DMWSVGVLSYILLSGLSPFGGENDDETL------------RNVKSCDWNMDDSAF 274
Query: 317 PQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP--NARLP 374
I + D +LL P+ R T +A HP+ P ++++P
Sbjct: 275 SGISE-------------DGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIP 321
Query: 375 NGR 377
+ R
Sbjct: 322 SSR 324
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 147/328 (44%), Gaps = 62/328 (18%)
Query: 83 RVVGTGSFGIVFQAKCL---ETGETVAIK--------KVLQDRRYKNRELQLMRLMDHPN 131
RV+G G +G VFQ + + TG+ A+K + +D + E ++ + HP
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF 82
Query: 132 VISLKHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRG 190
++ L + F T K L L++EY+ ++ L+ + Y+ +I
Sbjct: 83 IVDLIYAF-QTGGK----LYLILEYLSGGELFMQLEREGIFMEDTACFYLA----EISMA 133
Query: 191 LAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLV-KGEANISYICSRYYRAPE 249
L ++H G+ +RD+KP+N++++ H VKL DFG K + G + + Y APE
Sbjct: 134 LGHLHQ-KGIIYRDLKPENIMLNHQGH-VKLTDFGLCKESIHDGTVTHXFCGTIEYMAPE 191
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
++ + + ++D WS G ++ ++L G P F GEN + +I+K
Sbjct: 192 ILM-RSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC-------------- 236
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFFD 364
++ P+ + EA DL +LL+ + + R A E AHPFF
Sbjct: 237 --------KLNLPPY-------LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFR 281
Query: 365 EL--REPNARLPNGRPFPPLFNFKQELA 390
+ E AR PF PL +++++
Sbjct: 282 HINWEELLARKVE-PPFKPLLQSEEDVS 308
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 124/249 (49%), Gaps = 20/249 (8%)
Query: 71 GEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKV-LQDRRYKN---RELQLMRL 126
G+PK+ Y +G G+ G V+ A + TG+ VAI+++ LQ + K E+ +MR
Sbjct: 16 GDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73
Query: 127 MDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ 186
+PN+++ + DEL++ VMEY+ + + M++ + +
Sbjct: 74 NKNPNIVNYLDSYLVG---DELWV--VMEYLAGGSLTDVVTETCMDEGQ----IAAVCRE 124
Query: 187 IFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG-SAKVLVKGEANISYICSRYY 245
+ L ++H+ V HRD+K N+L+ + VKL DFG A++ + + + + Y+
Sbjct: 125 CLQALEFLHS-NQVIHRDIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYW 182
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 305
APE++ Y +DIWS G + E++ G+P + EN + L +I GTP +
Sbjct: 183 MAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNPE 240
Query: 306 CMNPNYTDF 314
++ + DF
Sbjct: 241 KLSAIFRDF 249
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 135/303 (44%), Gaps = 47/303 (15%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVL----QDRRYKNRELQLMRLMDHPNVISLKHCFF 140
+GTG+FG+V + TG A K V+ D+ +E+Q M ++ HP +++L F
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF- 223
Query: 141 STTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+D+ + ++ E++ E +V ++ M++ + Y++ Q+ +GL ++H
Sbjct: 224 ----EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMR----QVCKGLCHMHE-N 274
Query: 199 GVCHRDVKPQNLL-VDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA-TE 256
H D+KP+N++ ++++KL DFG L ++ + + APE+ G
Sbjct: 275 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVG 334
Query: 257 YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRF 316
Y T D+WS G + LL G F GEN + L ++ + N D F
Sbjct: 335 YYT--DMWSVGVLSYILLSGLSPFGGENDDETL------------RNVKSCDWNMDDSAF 380
Query: 317 PQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP--NARLP 374
I + D +LL P+ R T +A HP+ P ++++P
Sbjct: 381 SGISE-------------DGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIP 427
Query: 375 NGR 377
+ R
Sbjct: 428 SSR 430
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 124/289 (42%), Gaps = 48/289 (16%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISLKHC 138
V+GTG+F V A+ T + VAIK + ++ E+ ++ + HPN+++L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 139 FFSTTSKDELFLNLVMEYVP--ETMYRVL-KHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
+ S L L+M+ V E R++ K + + LI+ Q+ + Y+H
Sbjct: 85 YESGGH-----LYLIMQLVSGGELFDRIVEKGFYTERDASRLIF------QVLDAVKYLH 133
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKL--CDFGSAKVLVKGEANISYICSRYYRAPELIFG 253
+ G+ HRD+KP+NLL L K+ DFG +K+ G + + Y APE +
Sbjct: 134 DL-GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE-VLA 191
Query: 254 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTD 313
Y+ ++D WS G + LL G P F EN +I+K E +P + D
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA-------EYEFDSPYWDD 244
Query: 314 FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
+ A D L++ P R T +A HP+
Sbjct: 245 ------------------ISDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 124/290 (42%), Gaps = 48/290 (16%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISLKHC 138
V+GTG+F V A+ T + VAIK + ++ E+ ++ + HPN+++L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 139 FFSTTSKDELFLNLVMEYVP--ETMYRVL-KHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
+ S L L+M+ V E R++ K + + LI+ Q+ + Y+H
Sbjct: 85 YESGGH-----LYLIMQLVSGGELFDRIVEKGFYTERDASRLIF------QVLDAVKYLH 133
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKL--CDFGSAKVLVKGEANISYICSRYYRAPELIFG 253
+ G+ HRD+KP+NLL L K+ DFG +K+ G + + Y APE +
Sbjct: 134 DL-GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE-VLA 191
Query: 254 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTD 313
Y+ ++D WS G + LL G P F EN +I+K E +P + D
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA-------EYEFDSPYWDD 244
Query: 314 FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
+ A D L++ P R T +A HP+
Sbjct: 245 ------------------ISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 124/289 (42%), Gaps = 48/289 (16%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISLKHC 138
V+GTG+F V A+ T + VAIK + ++ E+ ++ + HPN+++L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 139 FFSTTSKDELFLNLVMEYVP--ETMYRVL-KHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
+ S L L+M+ V E R++ K + + LI+ Q+ + Y+H
Sbjct: 85 YESGGH-----LYLIMQLVSGGELFDRIVEKGFYTERDASRLIF------QVLDAVKYLH 133
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKL--CDFGSAKVLVKGEANISYICSRYYRAPELIFG 253
+ G+ HRD+KP+NLL L K+ DFG +K+ G + + Y APE +
Sbjct: 134 DL-GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE-VLA 191
Query: 254 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTD 313
Y+ ++D WS G + LL G P F EN +I+K E +P + D
Sbjct: 192 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKA-------EYEFDSPYWDD 244
Query: 314 FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
+ A D L++ P R T +A HP+
Sbjct: 245 ------------------ISDSAKDFIRHLMEKDPEKRFTCEQALQHPW 275
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 126/299 (42%), Gaps = 62/299 (20%)
Query: 83 RVVGTGSFGIVFQAKCLETG----------ETVAIKKVLQDRRYKNRELQLMRLMDHPNV 132
+++G G+FG V K TG E + K + +NR LQ R HP +
Sbjct: 16 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR---HPFL 72
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYV--PETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRG 190
+LK+ F + L VMEY E + + + R + Y +I
Sbjct: 73 TALKYSFQTHDR-----LCFVMEYANGGELFFHLSRERVFSEDR-----ARFYGAEIVSA 122
Query: 191 LAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPE 249
L Y+H+ V +RD+K +NL++D H +K+ DFG K +K A + C Y APE
Sbjct: 123 LDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXFCGTPEYLAPE 181
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+ +Y ++D W G V+ E++ G+ F ++ ++L E+I + EEIR
Sbjct: 182 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM------EEIR---- 229
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFF 363
F + + PEA L S LL+ P R A E H FF
Sbjct: 230 ------------------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 270
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 123/249 (49%), Gaps = 20/249 (8%)
Query: 71 GEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKV-LQDRRYKN---RELQLMRL 126
G+PK+ Y +G G+ G V+ A + TG+ VAI+++ LQ + K E+ +MR
Sbjct: 16 GDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73
Query: 127 MDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ 186
+PN+++ + DEL++ VMEY+ + + M++ + +
Sbjct: 74 NKNPNIVNYLDSYLVG---DELWV--VMEYLAGGSLTDVVTETCMDEGQ----IAAVCRE 124
Query: 187 IFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG-SAKVLVKGEANISYICSRYY 245
+ L ++H+ V HRD+K N+L+ + VKL DFG A++ + + + Y+
Sbjct: 125 CLQALEFLHS-NQVIHRDIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSEMVGTPYW 182
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 305
APE++ Y +DIWS G + E++ G+P + EN + L +I GTP +
Sbjct: 183 MAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNPE 240
Query: 306 CMNPNYTDF 314
++ + DF
Sbjct: 241 KLSAIFRDF 249
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 126/299 (42%), Gaps = 62/299 (20%)
Query: 83 RVVGTGSFGIVFQAKCLETG----------ETVAIKKVLQDRRYKNRELQLMRLMDHPNV 132
+++G G+FG V K TG E + K + +NR LQ R HP +
Sbjct: 14 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR---HPFL 70
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYV--PETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRG 190
+LK+ F + L VMEY E + + + R + Y +I
Sbjct: 71 TALKYSFQTHDR-----LCFVMEYANGGELFFHLSRERVFSEDR-----ARFYGAEIVSA 120
Query: 191 LAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPE 249
L Y+H+ V +RD+K +NL++D H +K+ DFG K +K A + C Y APE
Sbjct: 121 LDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXFCGTPEYLAPE 179
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+ +Y ++D W G V+ E++ G+ F ++ ++L E+I + EEIR
Sbjct: 180 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM------EEIR---- 227
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFF 363
F + + PEA L S LL+ P R A E H FF
Sbjct: 228 ------------------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 268
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 132/325 (40%), Gaps = 43/325 (13%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK---NRELQLMRLMDHPNVISLKHCFFS 141
+G+G+FG+ + ++ E VA+K + + + RE+ R + HPN++ K +
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 142 TTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
T L +VMEY E R+ R + + Q+ G++Y H +
Sbjct: 86 PTH-----LAIVMEYASGGELFERICN-----AGRFSEDEARFFFQQLISGVSYCHAMQ- 134
Query: 200 VCHRDVKPQNLLVDPL-THQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYT 258
VCHRD+K +N L+D ++K+CDFG +K V S + + Y APE++
Sbjct: 135 VCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDG 194
Query: 259 TSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQ 318
D+WS G L +L+G F + I R +N Y +
Sbjct: 195 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH----------RILNVQYAIPDYVH 244
Query: 319 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 378
I PE L SR+ P+ R + E H +F L+ A L N
Sbjct: 245 IS-------------PECRHLISRIFVADPAKRISIPEIRNHEWF--LKNLPADLMNDNT 289
Query: 379 FPPLFNFKQELAGASPELINRLIPE 403
F + G S E I ++I E
Sbjct: 290 MTTQFAASDQ-PGQSIEEIMQIIAE 313
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 126/299 (42%), Gaps = 62/299 (20%)
Query: 83 RVVGTGSFGIVFQAKCLETG----------ETVAIKKVLQDRRYKNRELQLMRLMDHPNV 132
+++G G+FG V K TG E + K + +NR LQ R HP +
Sbjct: 15 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR---HPFL 71
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYV--PETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRG 190
+LK+ F + L VMEY E + + + R + Y +I
Sbjct: 72 TALKYSFQTHDR-----LCFVMEYANGGELFFHLSRERVFSEDR-----ARFYGAEIVSA 121
Query: 191 LAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPE 249
L Y+H+ V +RD+K +NL++D H +K+ DFG K +K A + C Y APE
Sbjct: 122 LDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKXFCGTPEYLAPE 180
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+ +Y ++D W G V+ E++ G+ F ++ ++L E+I + EEIR
Sbjct: 181 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM------EEIR---- 228
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFF 363
F + + PEA L S LL+ P R A E H FF
Sbjct: 229 ------------------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 269
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 147/315 (46%), Gaps = 64/315 (20%)
Query: 80 MAERVVGTGSFG-IVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM----DHPNVIS 134
++E+++G GS G +VFQ G VA+K++L D + + L ++L+ DHPNVI
Sbjct: 18 VSEKILGYGSSGTVVFQGSF--QGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIR 73
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVL--KHYSSMNQRMPLIYVKLYTY-QIFRGL 191
++ + + D FL + +E + ++ K+ S N ++ Y + QI G+
Sbjct: 74 ----YYCSETTDR-FLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 128
Query: 192 AYIHTVPGVCHRDVKPQNLLVDPLTH------------QVKLCDFGSAKVLVKGEANISY 239
A++H++ + HRD+KPQN+LV + ++ + DFG K L G+
Sbjct: 129 AHLHSLK-IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 187
Query: 240 IC-----SRYYRAPELIFGATEYTT------SIDIWSAGCVLAELLLGQPLFPGENAVDQ 288
+ +RAPEL+ + T SIDI+S GCV +L + P + +
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY-YILSKGKHPFGDKYSR 246
Query: 289 LVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSP 348
II+ G + +E++C++ + + EA DL S+++ + P
Sbjct: 247 ESNIIR--GIFSLDEMKCLH--------------------DRSLIAEATDLISQMIDHDP 284
Query: 349 SLRCTALEACAHPFF 363
R TA++ HP F
Sbjct: 285 LKRPTAMKVLRHPLF 299
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 123/249 (49%), Gaps = 20/249 (8%)
Query: 71 GEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKV-LQDRRYKN---RELQLMRL 126
G+PK+ Y +G G+ G V+ A + TG+ VAI+++ LQ + K E+ +MR
Sbjct: 16 GDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 73
Query: 127 MDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ 186
+PN+++ + DEL++ VMEY+ + + M++ + +
Sbjct: 74 NKNPNIVNYLDSYLVG---DELWV--VMEYLAGGSLTDVVTETCMDEGQ----IAAVCRE 124
Query: 187 IFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG-SAKVLVKGEANISYICSRYY 245
+ L ++H+ V HRD+K N+L+ + VKL DFG A++ + + + Y+
Sbjct: 125 CLQALEFLHS-NQVIHRDIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSXMVGTPYW 182
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 305
APE++ Y +DIWS G + E++ G+P + EN + L +I GTP +
Sbjct: 183 MAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNPE 240
Query: 306 CMNPNYTDF 314
++ + DF
Sbjct: 241 KLSAIFRDF 249
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 126/299 (42%), Gaps = 62/299 (20%)
Query: 83 RVVGTGSFGIVFQAKCLETG----------ETVAIKKVLQDRRYKNRELQLMRLMDHPNV 132
+++G G+FG V K TG E + K + +NR LQ R HP +
Sbjct: 157 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR---HPFL 213
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYV--PETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRG 190
+LK+ F + L VMEY E + + + R + Y +I
Sbjct: 214 TALKYSFQTHDR-----LCFVMEYANGGELFFHLSRERVFSEDR-----ARFYGAEIVSA 263
Query: 191 LAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPE 249
L Y+H+ V +RD+K +NL++D H +K+ DFG K +K A + C Y APE
Sbjct: 264 LDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKTFCGTPEYLAPE 322
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+ +Y ++D W G V+ E++ G+ F ++ ++L E+I + EEIR
Sbjct: 323 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM------EEIR---- 370
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFF 363
F + + PEA L S LL+ P R A E H FF
Sbjct: 371 ------------------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 411
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 126/299 (42%), Gaps = 62/299 (20%)
Query: 83 RVVGTGSFGIVFQAKCLETG----------ETVAIKKVLQDRRYKNRELQLMRLMDHPNV 132
+++G G+FG V K TG E + K + +NR LQ R HP +
Sbjct: 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR---HPFL 210
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYV--PETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRG 190
+LK+ F + L VMEY E + + + R + Y +I
Sbjct: 211 TALKYSFQTHDR-----LCFVMEYANGGELFFHLSRERVFSEDR-----ARFYGAEIVSA 260
Query: 191 LAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPE 249
L Y+H+ V +RD+K +NL++D H +K+ DFG K +K A + C Y APE
Sbjct: 261 LDYLHSEKNVVYRDLKLENLMLDKDGH-IKITDFGLCKEGIKDGATMKTFCGTPEYLAPE 319
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
+ +Y ++D W G V+ E++ G+ F ++ ++L E+I + EEIR
Sbjct: 320 -VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELILM------EEIR---- 367
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPFF 363
F + + PEA L S LL+ P R A E H FF
Sbjct: 368 ------------------FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 408
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 134/309 (43%), Gaps = 62/309 (20%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-----NRELQLMRLMDHPNVI---- 133
+ +G G++G V A T E VA+K V R +E+ + ++++H NV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 134 -----SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIF 188
++++ F S ELF + + MP + + +Q+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLM 114
Query: 189 RGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG--EANISYICSRY-Y 245
G+ Y+H + G+ HRD+KP+NLL+D +K+ DFG A V E ++ +C Y
Sbjct: 115 AGVVYLHGI-GITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 305
APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------- 216
Query: 306 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 365
Y+D++ + +PW K++ + L ++L +PS R T + ++++
Sbjct: 217 -----YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
Query: 366 LREPNARLP 374
+ A+ P
Sbjct: 267 PLKKGAKRP 275
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 123/249 (49%), Gaps = 20/249 (8%)
Query: 71 GEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKV-LQDRRYKN---RELQLMRL 126
G+PK+ Y +G G+ G V+ A + TG+ VAI+++ LQ + K E+ +MR
Sbjct: 17 GDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 74
Query: 127 MDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ 186
+PN+++ + DEL++ VMEY+ + + M++ + +
Sbjct: 75 NKNPNIVNYLDSYLVG---DELWV--VMEYLAGGSLTDVVTETCMDEGQ----IAAVCRE 125
Query: 187 IFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG-SAKVLVKGEANISYICSRYY 245
+ L ++H+ V HRD+K N+L+ + VKL DFG A++ + + + Y+
Sbjct: 126 CLQALEFLHS-NQVIHRDIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSXMVGTPYW 183
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 305
APE++ Y +DIWS G + E++ G+P + EN + L +I GTP +
Sbjct: 184 MAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNPE 241
Query: 306 CMNPNYTDF 314
++ + DF
Sbjct: 242 KLSAIFRDF 250
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 113/220 (51%), Gaps = 25/220 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
+ F KD L +VMEYV M+ L+ R + + Y QI Y+
Sbjct: 107 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYL 157
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPELIFG 253
H++ + +RD+KP+NLL+D + +++ DFG AK VKG +C Y APE+I
Sbjct: 158 HSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEYLAPEIIL- 211
Query: 254 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+ Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 113/220 (51%), Gaps = 25/220 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 48 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
+ F KD L +VMEYV M+ L+ R + + Y QI Y+
Sbjct: 108 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYL 158
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPELIFG 253
H++ + +RD+KP+NLL+D + +++ DFG AK VKG +C Y APE+I
Sbjct: 159 HSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEYLAPEIIL- 212
Query: 254 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+ Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 251
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 113/220 (51%), Gaps = 25/220 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 127
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
+ F KD L +VMEYV M+ L+ R + + Y QI Y+
Sbjct: 128 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFXEPHARFYAAQIVLTFEYL 178
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPELIFG 253
H++ + +RD+KP+NLL+D + +++ DFG AK VKG +C Y APE+I
Sbjct: 179 HSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEYLAPEIIL- 232
Query: 254 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+ Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 271
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 113/220 (51%), Gaps = 25/220 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
+ F KD L +VMEYV M+ L+ R + + Y QI Y+
Sbjct: 107 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYL 157
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPELIFG 253
H++ + +RD+KP+NLL+D + +++ DFG AK VKG +C Y APE+I
Sbjct: 158 HSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEYLAPEIIL- 211
Query: 254 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+ Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 113/220 (51%), Gaps = 25/220 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
+ F KD L +VMEYV M+ L+ R + + Y QI Y+
Sbjct: 107 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYL 157
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPELIFG 253
H++ + +RD+KP+NLL+D + +++ DFG AK VKG +C Y APE+I
Sbjct: 158 HSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEYLAPEIIL- 211
Query: 254 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+ Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 113/220 (51%), Gaps = 25/220 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
+ F KD L +VMEYV M+ L+ R + + Y QI Y+
Sbjct: 107 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYL 157
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPELIFG 253
H++ + +RD+KP+NLL+D + +++ DFG AK VKG +C Y APE+I
Sbjct: 158 HSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEYLAPEIIL- 211
Query: 254 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+ Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 113/220 (51%), Gaps = 25/220 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
+ F KD L +VMEYV M+ L+ R + + Y QI Y+
Sbjct: 107 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFAEPHARFYAAQIVLTFEYL 157
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPELIFG 253
H++ + +RD+KP+NLL+D + +++ DFG AK VKG +C Y APE+I
Sbjct: 158 HSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEYLAPEIIL- 211
Query: 254 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+ Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 128/285 (44%), Gaps = 39/285 (13%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK---NRELQLMRLMDHPNVISLKHCFFS 141
+G+G+FG+ + T E VA+K + + RE+ R + HPN++ K +
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILT 87
Query: 142 TTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
T L ++MEY E R+ R + + Q+ G++Y H++
Sbjct: 88 PT-----HLAIIMEYASGGELYERICN-----AGRFSEDEARFFFQQLLSGVSYCHSM-Q 136
Query: 200 VCHRDVKPQNLLVD-PLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYT 258
+CHRD+K +N L+D ++K+CDFG +K V S + + Y APE++ EY
Sbjct: 137 ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLL-RQEYD 195
Query: 259 TSI-DIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTR--EEIRCMNPN---- 310
I D+WS G L +L+G P E D I ++L ++IR ++P
Sbjct: 196 GKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIR-ISPECCHL 254
Query: 311 ---------YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQY 346
T P+IK H W F K +P + ++ ++ Q+
Sbjct: 255 ISRIFVADPATRISIPEIKTHSW---FLKNLPADLMNESNTGSQF 296
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 113/220 (51%), Gaps = 25/220 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
+ F KD L +VMEYV M+ L+ R + + Y QI Y+
Sbjct: 107 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYL 157
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPELIFG 253
H++ + +RD+KP+NLL+D + +++ DFG AK VKG +C Y APE+I
Sbjct: 158 HSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEYLAPEIIL- 211
Query: 254 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+ Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADEPI-QIYEKI 250
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 32/230 (13%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRL--------MDHPNVIS 134
RV+G GS+ V + +T A+K V ++ + ++ ++ +HP ++
Sbjct: 26 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 85
Query: 135 LKHCFFSTTSKDELFLNLVMEYV--PETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
L CF T S+ L V+EYV + M+ + + +++P + + Y+ +I L
Sbjct: 86 LHSCF-QTESR----LFFVIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALN 135
Query: 193 YIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPELI 251
Y+H G+ +RD+K N+L+D H +KL D+G K ++ S C Y APE++
Sbjct: 136 YLHE-RGIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL 193
Query: 252 FGATEYTTSIDIWSAGCVLAELLLGQPLF--------PGENAVDQLVEII 293
G +Y S+D W+ G ++ E++ G+ F P +N D L ++I
Sbjct: 194 RGE-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 242
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 32/230 (13%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRL--------MDHPNVIS 134
RV+G GS+ V + +T A+K V ++ + ++ ++ +HP ++
Sbjct: 15 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 74
Query: 135 LKHCFFSTTSKDELFLNLVMEYV--PETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
L CF T S+ L V+EYV + M+ + + +++P + + Y+ +I L
Sbjct: 75 LHSCF-QTESR----LFFVIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALN 124
Query: 193 YIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPELI 251
Y+H G+ +RD+K N+L+D H +KL D+G K ++ S C Y APE++
Sbjct: 125 YLHE-RGIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL 182
Query: 252 FGATEYTTSIDIWSAGCVLAELLLGQPLF--------PGENAVDQLVEII 293
G +Y S+D W+ G ++ E++ G+ F P +N D L ++I
Sbjct: 183 RGE-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 231
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 113/220 (51%), Gaps = 25/220 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 93
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
+ F KD L +VMEYV M+ L+ R + + Y QI Y+
Sbjct: 94 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYL 144
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPELIFG 253
H++ + +RD+KP+NLL+D + +++ DFG AK VKG +C Y APE+I
Sbjct: 145 HSLD-LIYRDLKPENLLIDEQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEYLAPEIIL- 198
Query: 254 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+ Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 199 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 237
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 23/219 (10%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
+ F KD L +VMEYV M+ L+ R + + Y QI Y+
Sbjct: 107 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYL 157
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H++ + +RD+KP+NLL+D + +++ DFG AK VKG + Y APE+I +
Sbjct: 158 HSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT-WXLAGTPEYLAPEIIL-S 212
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 32/230 (13%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRL--------MDHPNVIS 134
RV+G GS+ V + +T A+K V ++ + ++ ++ +HP ++
Sbjct: 11 RVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 70
Query: 135 LKHCFFSTTSKDELFLNLVMEYV--PETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
L CF T S+ L V+EYV + M+ + + +++P + + Y+ +I L
Sbjct: 71 LHSCF-QTESR----LFFVIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALN 120
Query: 193 YIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPELI 251
Y+H G+ +RD+K N+L+D H +KL D+G K ++ S C Y APE++
Sbjct: 121 YLHE-RGIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL 178
Query: 252 FGATEYTTSIDIWSAGCVLAELLLGQPLF--------PGENAVDQLVEII 293
G +Y S+D W+ G ++ E++ G+ F P +N D L ++I
Sbjct: 179 RGE-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 227
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 113/220 (51%), Gaps = 25/220 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
+ F KD L +VMEYV M+ L+ R + + Y QI Y+
Sbjct: 107 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFXEPHARFYAAQIVLTFEYL 157
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPELIFG 253
H++ + +RD+KP+NLL+D + +++ DFG AK VKG +C Y APE+I
Sbjct: 158 HSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEYLAPEIIL- 211
Query: 254 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+ Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 112/219 (51%), Gaps = 23/219 (10%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
+ F KD L +VMEYV M+ L+ R + + Y QI Y+
Sbjct: 107 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYL 157
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H++ + +RD+KP+NLL+D + +++ DFG AK VKG + Y APE+I +
Sbjct: 158 HSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT-WXLXGTPEYLAPEIIL-S 212
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 146/324 (45%), Gaps = 60/324 (18%)
Query: 83 RVVGTGSFGIVFQAKCL---ETGETVAIK-----KVLQDRRYKNRELQLMRLMDH----P 130
+V+GTG++G VF + + +TG+ A+K ++Q + ++++H P
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRG 190
+++L + F + T L+L+++Y+ + H S +R V++Y +I
Sbjct: 120 FLVTLHYAFQTETK-----LHLILDYINGG--ELFTHLSQ-RERFTEHEVQIYVGEIVLA 171
Query: 191 LAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISY-ICSRY-YRAP 248
L ++H + G+ +RD+K +N+L+D H V L DFG +K V E +Y C Y AP
Sbjct: 172 LEHLHKL-GIIYRDIKLENILLDSNGHVV-LTDFGLSKEFVADETERAYDFCGTIEYMAP 229
Query: 249 ELIFGA-TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 307
+++ G + + ++D WS G ++ ELL G F + + EI +R ++
Sbjct: 230 DIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEI-------SRRILKSE 282
Query: 308 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACAHPF 362
P +PQ M A DL RLL P R A E H F
Sbjct: 283 PP------YPQ------------EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLF 324
Query: 363 FDELREPN---ARLPNGRPFPPLF 383
F ++ + ++P PF P+
Sbjct: 325 FQKINWDDLAAKKVPA--PFKPVI 346
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 116/230 (50%), Gaps = 32/230 (13%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRL--------MDHPNVIS 134
RV+G GS+ V + +T A++ V ++ + ++ ++ +HP ++
Sbjct: 58 RVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVG 117
Query: 135 LKHCFFSTTSKDELFLNLVMEYV--PETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
L CF T S+ L V+EYV + M+ + + +++P + + Y+ +I L
Sbjct: 118 LHSCF-QTESR----LFFVIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALN 167
Query: 193 YIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK-GEANISYICSRYYRAPELI 251
Y+H G+ +RD+K N+L+D H +KL D+G K ++ G+ ++ + Y APE++
Sbjct: 168 YLHE-RGIIYRDLKLDNVLLDSEGH-IKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEIL 225
Query: 252 FGATEYTTSIDIWSAGCVLAELLLGQPLF--------PGENAVDQLVEII 293
G +Y S+D W+ G ++ E++ G+ F P +N D L ++I
Sbjct: 226 RGE-DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 274
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 134/309 (43%), Gaps = 62/309 (20%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-----NRELQLMRLMDHPNVI---- 133
+ +G G++G V A T E VA+K V R +E+ + ++++H NV+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 134 -----SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIF 188
++++ F S ELF + + MP + + +Q+
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLM 115
Query: 189 RGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG--EANISYICSRY-Y 245
G+ Y+H + G+ HRD+KP+NLL+D +K+ DFG A V E ++ +C Y
Sbjct: 116 AGVVYLHGI-GITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 305
APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------- 217
Query: 306 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 365
Y+D++ + +PW K++ + L ++L +PS R T + ++++
Sbjct: 218 -----YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 267
Query: 366 LREPNARLP 374
+ A+ P
Sbjct: 268 PLKKGAKRP 276
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 113/220 (51%), Gaps = 25/220 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
+ F KD L +VMEYV M+ L+ R + + Y QI Y+
Sbjct: 107 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFXEPHARFYAAQIVLTFEYL 157
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPELIFG 253
H++ + +RD+KP+NLL+D + +++ DFG AK VKG +C Y APE+I
Sbjct: 158 HSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEYLAPEIIL- 211
Query: 254 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+ Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 110/209 (52%), Gaps = 34/209 (16%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TGE VA+KK+ R RE+++++ + H N++ K
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHY-SSMNQRMPLIYVKLYTYQIFRGLAYIH 195
+S ++ L L+MEY+P Y L+ Y +R+ I + YT QI +G+ Y+
Sbjct: 79 GVCYSAGRRN---LKLIMEYLP---YGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 132
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL--------VK--GEANISYICSRYY 245
T + HR++ +N+LV+ ++VK+ DFG KVL VK GE+ I ++
Sbjct: 133 TKRYI-HRNLATRNILVEN-ENRVKIGDFGLTKVLPQDKEYYKVKEPGESPI------FW 184
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELL 274
APE + ++++ + D+WS G VL EL
Sbjct: 185 YAPESL-TESKFSVASDVWSFGVVLYELF 212
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 134/309 (43%), Gaps = 62/309 (20%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-----NRELQLMRLMDHPNVI---- 133
+ +G G++G V A T E VA+K V R +E+ + ++++H NV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 134 -----SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIF 188
++++ F S ELF + + MP + + +Q+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLM 114
Query: 189 RGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG--EANISYICSRY-Y 245
G+ Y+H + G+ HRD+KP+NLL+D +K+ DFG A V E ++ +C Y
Sbjct: 115 AGVVYLHGI-GITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 305
APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------- 216
Query: 306 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 365
Y+D++ + +PW K++ + L ++L +PS R T + ++++
Sbjct: 217 -----YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
Query: 366 LREPNARLP 374
+ A+ P
Sbjct: 267 PLKKGAKRP 275
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 113/220 (51%), Gaps = 25/220 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
+ F KD L +VMEYV M+ L+ R + + Y QI Y+
Sbjct: 107 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFXEPHARFYAAQIVLTFEYL 157
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPELIFG 253
H++ + +RD+KP+NLL+D + +++ DFG AK VKG +C Y APE+I
Sbjct: 158 HSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEYLAPEIIL- 211
Query: 254 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+ Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 134/309 (43%), Gaps = 62/309 (20%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-----NRELQLMRLMDHPNVI---- 133
+ +G G++G V A T E VA+K V R +E+ + ++++H NV+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 134 -----SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIF 188
++++ F S ELF + + MP + + +Q+
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLM 115
Query: 189 RGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG--EANISYICSRY-Y 245
G+ Y+H + G+ HRD+KP+NLL+D +K+ DFG A V E ++ +C Y
Sbjct: 116 AGVVYLHGI-GITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 305
APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------- 217
Query: 306 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 365
Y+D++ + +PW K++ + L ++L +PS R T + ++++
Sbjct: 218 -----YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 267
Query: 366 LREPNARLP 374
+ A+ P
Sbjct: 268 PLKKGAKRP 276
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 134/309 (43%), Gaps = 62/309 (20%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-----NRELQLMRLMDHPNVI---- 133
+ +G G++G V A T E VA+K V R +E+ + ++++H NV+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 134 -----SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIF 188
++++ F S ELF + + MP + + +Q+
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLM 115
Query: 189 RGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG--EANISYICSRY-Y 245
G+ Y+H + G+ HRD+KP+NLL+D +K+ DFG A V E ++ +C Y
Sbjct: 116 AGVVYLHGI-GITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 305
APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------- 217
Query: 306 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 365
Y+D++ + +PW K++ + L ++L +PS R T + ++++
Sbjct: 218 -----YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 267
Query: 366 LREPNARLP 374
+ A+ P
Sbjct: 268 PLKKGAKRP 276
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 134/309 (43%), Gaps = 62/309 (20%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-----NRELQLMRLMDHPNVI---- 133
+ +G G++G V A T E VA+K V R +E+ + ++++H NV+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 134 -----SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIF 188
++++ F S ELF + + MP + + +Q+
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLM 115
Query: 189 RGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG--EANISYICSRY-Y 245
G+ Y+H + G+ HRD+KP+NLL+D +K+ DFG A V E ++ +C Y
Sbjct: 116 AGVVYLHGI-GITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 305
APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------- 217
Query: 306 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 365
Y+D++ + +PW K++ + L ++L +PS R T + ++++
Sbjct: 218 -----YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 267
Query: 366 LREPNARLP 374
+ A+ P
Sbjct: 268 PLKKGAKRP 276
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 34/220 (15%)
Query: 82 ERVVGTGSFGIVFQAKCLETGETVAIKKVLQD------RRYKN--RELQLMRLMDHPNVI 133
E ++G G FG V++A G+ VA+K D + +N +E +L ++ HPN+I
Sbjct: 12 EEIIGIGGFGKVYRA--FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNII 69
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPET-MYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
+L+ + L LVME+ + RVL +R+P + + QI RG+
Sbjct: 70 ALRGVCLKEPN-----LCLVMEFARGGPLNRVLS-----GKRIPPDILVNWAVQIARGMN 119
Query: 193 YIH---TVPGVCHRDVKPQNLLV-------DPLTHQVKLCDFGSAKVLVKGEANISYICS 242
Y+H VP + HRD+K N+L+ D +K+ DFG A+ + +S +
Sbjct: 120 YLHDEAIVP-IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHR-TTKMSAAGA 177
Query: 243 RYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPG 282
+ APE+I A+ ++ D+WS G +L ELL G+ F G
Sbjct: 178 YAWMAPEVI-RASMFSKGSDVWSYGVLLWELLTGEVPFRG 216
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 103/205 (50%), Gaps = 21/205 (10%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFS-- 141
++G+G FG VF+AK G+T IK+V + RE++ + +DH N++ C+
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFD 77
Query: 142 ----TTSKDE-------LFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRG 190
T+SK+ LF+ ME+ + + ++ ++L+ QI +G
Sbjct: 78 YDPETSSKNSSRSKTKCLFIQ--MEFCDKGTLEQWIEKRRGEKLDKVLALELFE-QITKG 134
Query: 191 LAYIHTVPGVCHRDVKPQNL-LVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
+ YIH+ + +RD+KP N+ LVD T QVK+ DFG L + Y +PE
Sbjct: 135 VDYIHS-KKLINRDLKPSNIFLVD--TKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPE 191
Query: 250 LIFGATEYTTSIDIWSAGCVLAELL 274
I + +Y +D+++ G +LAELL
Sbjct: 192 QI-SSQDYGKEVDLYALGLILAELL 215
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 113/220 (51%), Gaps = 25/220 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 101
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
+ F KD L +VMEYV M+ L+ R + + Y QI Y+
Sbjct: 102 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFXEPHARFYAAQIVLTFEYL 152
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPELIFG 253
H++ + +RD+KP+NLL+D + +++ DFG AK VKG +C Y APE+I
Sbjct: 153 HSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEYLAPEIIL- 206
Query: 254 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+ Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 207 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 245
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 146/343 (42%), Gaps = 76/343 (22%)
Query: 76 TISYMAERVVGTGSFGIV-----------FQAKCLETGETVAIKKVLQDRRYKNRELQLM 124
T Y +G G+F +V + AK + T + A +D + RE ++
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSA-----RDHQKLEREARIC 84
Query: 125 RLMDHPNVISLK---------HCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
RL+ HPN++ L + F + ELF ++V ++YS +
Sbjct: 85 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR----------EYYSEADASH 134
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTH--QVKLCDFGSAKVLVKG 233
+ +QI + +IH + HRD+KP+NLL+ VKL DFG A + V+G
Sbjct: 135 CI-------HQILESVNHIHQ-HDIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQG 185
Query: 234 E--ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVE 291
E A + + Y +PE + Y +DIW+ G +L LL+G P F E+ +L +
Sbjct: 186 EQQAWFGFAGTPGYLSPE-VLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQ-HKLYQ 243
Query: 292 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 351
IK DF P+ W V PEA +L +++L +P+ R
Sbjct: 244 QIKA--------------GAYDFPSPE-----WDTV-----TPEAKNLINQMLTINPAKR 279
Query: 352 CTALEACAHPFFDELREPNARLPNGRPFPPL--FNFKQELAGA 392
TA +A HP+ + + + L FN +++L GA
Sbjct: 280 ITADQALKHPWVCQRSTVASMMHRQETVECLRKFNARRKLKGA 322
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 124/249 (49%), Gaps = 20/249 (8%)
Query: 71 GEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKV-LQDRRYKN---RELQLMRL 126
G+PK+ Y +G G+ G V+ A + TG+ VAI+++ LQ + K E+ +MR
Sbjct: 17 GDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 74
Query: 127 MDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ 186
+PN+++ + DEL++ VMEY+ + + M++ + +
Sbjct: 75 NKNPNIVNYLDSYLVG---DELWV--VMEYLAGGSLTDVVTETCMDEGQ----IAAVCRE 125
Query: 187 IFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG-SAKVLVKGEANISYICSRYY 245
+ L ++H+ V HR++K N+L+ + VKL DFG A++ + + + + Y+
Sbjct: 126 CLQALEFLHS-NQVIHRNIKSDNILLG-MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYW 183
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 305
APE++ Y +DIWS G + E++ G+P + EN + L +I GTP +
Sbjct: 184 MAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNPE 241
Query: 306 CMNPNYTDF 314
++ + DF
Sbjct: 242 KLSAIFRDF 250
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 99/217 (45%), Gaps = 22/217 (10%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVL----QDRRYKNRELQLMRLMDHPNVIS 134
Y+ + +G G F V + L G A+K++L QDR RE + RL +HPN++
Sbjct: 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILR 90
Query: 135 L-KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L +C +K E +L L+ + T++ ++ + + I RGL
Sbjct: 91 LVAYCLRERGAKHEAWL-LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEA 149
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGS---AKVLVKGEANISYI-------CSR 243
IH G HRD+KP N+L+ V L D GS A + V+G + C+
Sbjct: 150 IHA-KGYAHRDLKPTNILLGDEGQPV-LMDLGSMNQACIHVEGSRQALTLQDWAAQRCTI 207
Query: 244 YYRAPELIFGATEYTT---SIDIWSAGCVLAELLLGQ 277
YRAPEL F + D+WS GCVL ++ G+
Sbjct: 208 SYRAPEL-FSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 113/229 (49%), Gaps = 25/229 (10%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ-------DRRYKNRELQLMRLMDHP 130
Y +V+G G+FG V + + + A+K + + D + E +M + P
Sbjct: 76 DYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 135
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
V+ L C F +D+ +L +VMEY+P + ++ +Y +P + K YT ++
Sbjct: 136 WVVQL-FCAF----QDDKYLYMVMEYMPGGDLVNLMSNYD-----VPEKWAKFYTAEVVL 185
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSA-KVLVKGEANI-SYICSRYYRA 247
L IH++ G+ HRDVKP N+L+D H +KL DFG+ K+ G + + + + Y +
Sbjct: 186 ALDAIHSM-GLIHRDVKPDNMLLDKHGH-LKLADFGTCMKMDETGMVHCDTAVGTPDYIS 243
Query: 248 PELI---FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
PE++ G Y D WS G L E+L+G F ++ V +I+
Sbjct: 244 PEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIM 292
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 132/289 (45%), Gaps = 52/289 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------RELQLMRLMDHPNVISL 135
R +G G FG V+ A+ ++ VA+K + + + K RE+++ + HPN++ L
Sbjct: 29 RPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRL 88
Query: 136 KHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMN-QRMPLIYVKLYTYQIFRGLAY 193
+ F+ D + L++EY P +Y+ L+ + + QR I +L L Y
Sbjct: 89 YNYFY-----DRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELAD-----ALMY 138
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFG 253
H V HRD+KP+NLL+ L ++K+ DFG + V + + Y PE+I G
Sbjct: 139 CHG-KKVIHRDIKPENLLLG-LKGELKIADFGWS-VHAPSLRRKTMCGTLDYLPPEMIEG 195
Query: 254 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTD 313
+ +D+W G + ELL+G P F + + I+KV D
Sbjct: 196 RM-HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV-----------------D 237
Query: 314 FRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
+FP +P A DL S+LL+++PS R + AHP+
Sbjct: 238 LKFPA------------SVPTGAQDLISKLLRHNPSERLPLAQVSAHPW 274
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 133/325 (40%), Gaps = 43/325 (13%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK---NRELQLMRLMDHPNVISLKHCFFS 141
+G+G+FG+ + ++ E VA+K + + + RE+ R + HPN++ K +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 142 TTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
T L +VMEY E R+ R + + Q+ G++Y H +
Sbjct: 87 PTH-----LAIVMEYASGGELFERICN-----AGRFSEDEARFFFQQLISGVSYCHAM-Q 135
Query: 200 VCHRDVKPQNLLVDPL-THQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYT 258
VCHRD+K +N L+D ++K+C FG +K V S + + Y APE++
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDG 195
Query: 259 TSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQ 318
D+WS G L +L+G F + I R +N Y +
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH----------RILNVQYAIPDYVH 245
Query: 319 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 378
I PE L SR+ P+ R + E H +F L+ A L N
Sbjct: 246 IS-------------PECRHLISRIFVADPAKRISIPEIRNHEWF--LKNLPADLMNDNT 290
Query: 379 FPPLFNFKQELAGASPELINRLIPE 403
F+ + + G S E I ++I E
Sbjct: 291 MTTQFD-ESDQPGQSIEEIMQIIAE 314
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 134/309 (43%), Gaps = 62/309 (20%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-----NRELQLMRLMDHPNVI---- 133
+ +G G++G V A T E VA+K V R +E+ + ++++H NV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 134 -----SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIF 188
++++ F S ELF + + MP + + +Q+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLM 114
Query: 189 RGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG--EANISYICSRY-Y 245
G+ Y+H + G+ HRD+KP+NLL+D +K+ DFG A V E ++ +C Y
Sbjct: 115 AGVVYLHGI-GITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 305
APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------- 216
Query: 306 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 365
Y+D++ + +PW K++ + L ++L +PS R T + ++++
Sbjct: 217 -----YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
Query: 366 LREPNARLP 374
+ A+ P
Sbjct: 267 PLKKGAKRP 275
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 113/220 (51%), Gaps = 25/220 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
+ F KD L +VMEYV M+ L+ R + + Y QI Y+
Sbjct: 107 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYL 157
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPELIFG 253
H++ + +RD+KP+NL++D + +++ DFG AK VKG +C Y APE+I
Sbjct: 158 HSLD-LIYRDLKPENLIIDQQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEYLAPEIII- 211
Query: 254 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+ Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 134/309 (43%), Gaps = 62/309 (20%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-----NRELQLMRLMDHPNVI---- 133
+ +G G++G V A T E VA+K V R +E+ + ++++H NV+
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 70
Query: 134 -----SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIF 188
++++ F S ELF + + MP + + +Q+
Sbjct: 71 HRREGNIQYLFLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLM 113
Query: 189 RGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG--EANISYICSRY-Y 245
G+ Y+H + G+ HRD+KP+NLL+D +K+ DFG A V E ++ +C Y
Sbjct: 114 AGVVYLHGI-GITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 171
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 305
APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 172 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------- 215
Query: 306 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 365
Y+D++ + +PW K++ + L ++L +PS R T + ++++
Sbjct: 216 -----YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 265
Query: 366 LREPNARLP 374
+ A+ P
Sbjct: 266 PLKKGAKRP 274
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 153/365 (41%), Gaps = 59/365 (16%)
Query: 40 MDSDKEMSAAVIQGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCL 99
M S K S +V D GH++ IG E + + + G G+FG V +CL
Sbjct: 23 MQSSKRSSRSV---EDDKEGHLV-CRIGDWLQERYEIVGNL-----GEGTFGKV--VECL 71
Query: 100 ETG---ETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLN----L 152
+ VA+K + +Y+ + ++ ++ F D + +
Sbjct: 72 DHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCI 131
Query: 153 VMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLV 212
E + + + LK + Q PL +V+ YQ+ L ++H + H D+KP+N+L
Sbjct: 132 AFELLGKNTFEFLK--ENNFQPYPLPHVRHMAYQLCHALRFLHE-NQLTHTDLKPENILF 188
Query: 213 -----DPLTHQVKLC-------------DFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
+ L ++ K C DFGSA E + + + +R+YR PE+I
Sbjct: 189 VNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--DHEHHTTIVATRHYRPPEVIL-E 245
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG-------TPTREEIR-- 305
+ D+WS GC+L E G LF + LV + K+LG TR++
Sbjct: 246 LGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFY 305
Query: 306 ----CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAI---DLASRLLQYSPSLRCTALEAC 358
+ N +D R+ + P K + + E + DL R+L++ P+ R T EA
Sbjct: 306 KGGLVWDENSSDGRYVKENCKPL-KSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEAL 364
Query: 359 AHPFF 363
HPFF
Sbjct: 365 LHPFF 369
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 134/309 (43%), Gaps = 62/309 (20%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-----NRELQLMRLMDHPNVI---- 133
+ +G G++G V A T E VA+K V R +E+ + ++++H NV+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 134 -----SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIF 188
++++ F S ELF + + MP + + +Q+
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLM 115
Query: 189 RGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG--EANISYICSRY-Y 245
G+ Y+H + G+ HRD+KP+NLL+D +K+ DFG A V E ++ +C Y
Sbjct: 116 AGVVYLHGI-GITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 305
APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------- 217
Query: 306 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 365
Y+D++ + +PW K++ + L ++L +PS R T + ++++
Sbjct: 218 -----YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 267
Query: 366 LREPNARLP 374
+ A+ P
Sbjct: 268 PLKKGAKRP 276
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 129/311 (41%), Gaps = 61/311 (19%)
Query: 70 NGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIK----KVLQDRRYKN--RELQL 123
N K + +Y + +G G+F +V + TG A K K L R ++ RE ++
Sbjct: 22 NASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARI 81
Query: 124 MRLMDHPNVI---------SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQR 174
R + HPN++ S + F + ELF ++V + YS +
Sbjct: 82 CRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR----------EFYSEADAS 131
Query: 175 MPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTH--QVKLCDFGSAKVLVK 232
+ QI +AY H+ G+ HR++KP+NLL+ VKL DFG A +
Sbjct: 132 HCI-------QQILESIAYCHS-NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183
Query: 233 GEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEI 292
EA + + Y +PE + Y+ +DIW+ G +L LL+G P F E+ +L
Sbjct: 184 SEAWHGFAGTPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-HRLYAQ 241
Query: 293 IKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC 352
IK D+ P+ W V PEA L +L +P R
Sbjct: 242 IKA--------------GAYDYPSPE-----WDTV-----TPEAKSLIDSMLTVNPKKRI 277
Query: 353 TALEACAHPFF 363
TA +A P+
Sbjct: 278 TADQALKVPWI 288
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 113/220 (51%), Gaps = 25/220 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
+ F KD L +VMEYV M+ L+ R + + Y QI Y+
Sbjct: 107 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYL 157
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPELIFG 253
H++ + +RD+KP+NLL+D + +++ DFG AK VKG +C Y APE+I
Sbjct: 158 HSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEYLAPEIIL- 211
Query: 254 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+ Y ++D W+ G ++ ++ G P F + + Q+ E I
Sbjct: 212 SKGYNKAVDWWALGVLIYQMAAGYPPFFADQPI-QIYEKI 250
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 125/288 (43%), Gaps = 62/288 (21%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-----NRELQLMRLMDHPNVI---- 133
+ +G G++G V A T E VA+K V R +E+ + ++++H NV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 134 -----SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIF 188
++++ F S ELF + + MP + + +Q+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLM 114
Query: 189 RGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG--EANISYICSRY-Y 245
G+ Y+H + G+ HRD+KP+NLL+D +K+ DFG A V E ++ +C Y
Sbjct: 115 AGVVYLHGI-GITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 305
APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------- 216
Query: 306 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 353
Y+D++ + +PW K++ + L ++L +PS R T
Sbjct: 217 -----YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARIT 254
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 125/288 (43%), Gaps = 62/288 (21%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-----NRELQLMRLMDHPNVI---- 133
+ +G G++G V A T E VA+K V R +E+ + ++++H NV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 134 -----SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIF 188
++++ F S ELF + + MP + + +Q+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLM 114
Query: 189 RGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG--EANISYICSRY-Y 245
G+ Y+H + G+ HRD+KP+NLL+D +K+ DFG A V E ++ +C Y
Sbjct: 115 AGVVYLHGI-GITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 305
APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------- 216
Query: 306 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 353
Y+D++ + +PW K++ + L ++L +PS R T
Sbjct: 217 -----YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARIT 254
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 125/288 (43%), Gaps = 62/288 (21%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-----NRELQLMRLMDHPNVI---- 133
+ +G G++G V A T E VA+K V R +E+ + ++++H NV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 134 -----SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIF 188
++++ F S ELF + + MP + + +Q+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLM 114
Query: 189 RGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG--EANISYICSRY-Y 245
G+ Y+H + G+ HRD+KP+NLL+D +K+ DFG A V E ++ +C Y
Sbjct: 115 AGVVYLHGI-GITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 305
APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------- 216
Query: 306 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 353
Y+D++ + +PW K++ + L ++L +PS R T
Sbjct: 217 -----YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARIT 254
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 125/288 (43%), Gaps = 62/288 (21%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-----NRELQLMRLMDHPNVI---- 133
+ +G G++G V A T E VA+K V R +E+ + ++++H NV+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 134 -----SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIF 188
++++ F S ELF + + MP + + +Q+
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLM 115
Query: 189 RGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG--EANISYICSRY-Y 245
G+ Y+H + G+ HRD+KP+NLL+D +K+ DFG A V E ++ +C Y
Sbjct: 116 AGVVYLHGI-GITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 305
APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------- 217
Query: 306 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 353
Y+D++ + +PW K++ + L ++L +PS R T
Sbjct: 218 -----YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARIT 255
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 125/288 (43%), Gaps = 62/288 (21%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-----NRELQLMRLMDHPNVI---- 133
+ +G G++G V A T E VA+K V R +E+ + ++++H NV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 134 -----SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIF 188
++++ F S ELF + + MP + + +Q+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLM 114
Query: 189 RGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG--EANISYICSRY-Y 245
G+ Y+H + G+ HRD+KP+NLL+D +K+ DFG A V E ++ +C Y
Sbjct: 115 AGVVYLHGI-GITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 305
APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------- 216
Query: 306 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 353
Y+D++ + +PW K++ + L ++L +PS R T
Sbjct: 217 -----YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARIT 254
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 120/275 (43%), Gaps = 51/275 (18%)
Query: 102 GETVAIKKVLQDRRYKNRELQLMR-LMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPE- 159
G + + ++V + R +E+ ++R + HPN+I LK + + T F LV + + +
Sbjct: 55 GGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT-----FFFLVFDLMKKG 109
Query: 160 TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGL----AYIHTVPGVCHRDVKPQNLLVDPL 215
++ L +++++ T +I R L +H + + HRD+KP+N+L+D
Sbjct: 110 ELFDYLTEKVTLSEKE--------TRKIMRALLEVICALHKL-NIVHRDLKPENILLDD- 159
Query: 216 THQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATE-----YTTSIDIWSAGCVL 270
+KL DFG + L GE S + Y APE+I + Y +D+WS G ++
Sbjct: 160 DMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219
Query: 271 AELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHK 330
LL G P F + L I M+ NY Q + W
Sbjct: 220 YTLLAGSPPFWHRKQMLMLRMI--------------MSGNY------QFGSPEWDD---- 255
Query: 331 RMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 365
DL SR L P R TA EA AHPFF +
Sbjct: 256 -YSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 110/232 (47%), Gaps = 46/232 (19%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-----LMRLMDHPNVISLKH 137
RV+ G F V++A+ + +G A+K++L + KNR + + +L HPN++
Sbjct: 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQF-- 91
Query: 138 CFFSTTSKDEL------FLNLVMEYVPETMYRVLKHYSSMNQRMPL---IYVKLYTYQIF 188
C ++ K+E FL L+ E + LK M R PL +K++ YQ
Sbjct: 92 CSAASIGKEESDTGQAEFL-LLTELCKGQLVEFLK---KMESRGPLSCDTVLKIF-YQTC 146
Query: 189 RGLAYIH-TVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSA---------------KVL 230
R + ++H P + HRD+K +NLL L++Q +KLCDFGSA + L
Sbjct: 147 RAVQHMHRQKPPIIHRDLKVENLL---LSNQGTIKLCDFGSATTISHYPDYSWSAQRRAL 203
Query: 231 VKGEANISYICSRYYRAPELI--FGATEYTTSIDIWSAGCVLAELLLGQPLF 280
V E I+ + YR PE+I + DIW+ GC+L L Q F
Sbjct: 204 V--EEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF 253
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 135/313 (43%), Gaps = 58/313 (18%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------RELQLMRLMDHPNVISL 135
R +G G FG V+ A+ + +A+K + + + K RE+++ + HPN++ +
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 136 KHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
+ F D + L++E+ P +Y+ L+ + +++ +++ ++ L Y
Sbjct: 80 YNYF-----HDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME----ELADALHYC 130
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H V HRD+KP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 131 HER-KVIHRDIKPENLLMG-YKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGK 187
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
T + +D+W AG + E L+G P F + + I+ V D
Sbjct: 188 T-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV-----------------DL 229
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLP 374
+FP + + DL S+LL+Y P R HP+ + N+R
Sbjct: 230 KFPPF------------LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWV----KANSR-- 271
Query: 375 NGRPFPPLFNFKQ 387
R PP++ Q
Sbjct: 272 --RVLPPVYQSTQ 282
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 135/313 (43%), Gaps = 58/313 (18%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------RELQLMRLMDHPNVISL 135
R +G G FG V+ A+ + +A+K + + + K RE+++ + HPN++ +
Sbjct: 21 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 80
Query: 136 KHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
+ F D + L++E+ P +Y+ L+ + +++ +++ ++ L Y
Sbjct: 81 YNYF-----HDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME----ELADALHYC 131
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H V HRD+KP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 132 HER-KVIHRDIKPENLLMG-YKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGK 188
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
T + +D+W AG + E L+G P F + + I+ V D
Sbjct: 189 T-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV-----------------DL 230
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLP 374
+FP + + DL S+LL+Y P R HP+ + N+R
Sbjct: 231 KFPPF------------LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWV----KANSR-- 272
Query: 375 NGRPFPPLFNFKQ 387
R PP++ Q
Sbjct: 273 --RVLPPVYQSTQ 283
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 102/198 (51%), Gaps = 18/198 (9%)
Query: 82 ERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRL--MDHPNVISLKHCF 139
E VVG G+FG+V +AK + VAIK++ + K ++L +L ++HPN++ L
Sbjct: 13 EEVVGRGAFGVVCKAKW--RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 140 FSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV- 197
+ LVMEY ++Y VL H + + + Q +G+AY+H++
Sbjct: 71 LNPVC-------LVMEYAEGGSLYNVL-HGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 122
Query: 198 -PGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATE 256
+ HRD+KP NLL+ +K+CDFG+A + N S + APE +F +
Sbjct: 123 PKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK--GSAAWMAPE-VFEGSN 179
Query: 257 YTTSIDIWSAGCVLAELL 274
Y+ D++S G +L E++
Sbjct: 180 YSEKCDVFSWGIILWEVI 197
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 102/198 (51%), Gaps = 18/198 (9%)
Query: 82 ERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRL--MDHPNVISLKHCF 139
E VVG G+FG+V +AK + VAIK++ + K ++L +L ++HPN++ L
Sbjct: 14 EEVVGRGAFGVVCKAKW--RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 140 FSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV- 197
+ LVMEY ++Y VL H + + + Q +G+AY+H++
Sbjct: 72 LNPVC-------LVMEYAEGGSLYNVL-HGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQ 123
Query: 198 -PGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATE 256
+ HRD+KP NLL+ +K+CDFG+A + N S + APE +F +
Sbjct: 124 PKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK--GSAAWMAPE-VFEGSN 180
Query: 257 YTTSIDIWSAGCVLAELL 274
Y+ D++S G +L E++
Sbjct: 181 YSEKCDVFSWGIILWEVI 198
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 125/277 (45%), Gaps = 31/277 (11%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK--------NRELQLMRLMDHP 130
Y+ ++G GS+G V + ET A+K + + + + +E+QL+R + H
Sbjct: 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHK 66
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRG 190
NVI L ++ + + +VMEY M +L S +R P+ Y Q+ G
Sbjct: 67 NVIQLVDVLYNEEKQK---MYMVMEYCVCGMQEMLD--SVPEKRFPVCQAHGYFCQLIDG 121
Query: 191 LAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR---YYRA 247
L Y+H+ G+ H+D+KP NLL+ +K+ G A+ L A+ + S+ ++
Sbjct: 122 LEYLHS-QGIVHKDIKPGNLLLT-TGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQP 179
Query: 248 PELIFGATEYTT-SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV-------LGTP 299
PE+ G ++ +DIWSAG L + G F G+N I K G P
Sbjct: 180 PEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPP 239
Query: 300 TREEIRCMNPNYTDFRFP--QIKAHPWHKVFHKRMPP 334
+ ++ M RF QI+ H W F K+ PP
Sbjct: 240 LSDLLKGMLEYEPAKRFSIRQIRQHSW---FRKKHPP 273
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 135/313 (43%), Gaps = 58/313 (18%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------RELQLMRLMDHPNVISL 135
R +G G FG V+ A+ + +A+K + + + K RE+++ + HPN++ +
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 136 KHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
+ F D + L++E+ P +Y+ L+ + +++ +++ ++ L Y
Sbjct: 80 YNYF-----HDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME----ELADALHYC 130
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGA 254
H V HRD+KP+NLL+ ++K+ DFG + V + Y PE+I G
Sbjct: 131 HER-KVIHRDIKPENLLMG-YKGELKIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGK 187
Query: 255 TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF 314
T + +D+W AG + E L+G P F + + I+ V D
Sbjct: 188 T-HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV-----------------DL 229
Query: 315 RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLP 374
+FP + + DL S+LL+Y P R HP+ + N+R
Sbjct: 230 KFPPF------------LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWV----KANSR-- 271
Query: 375 NGRPFPPLFNFKQ 387
R PP++ Q
Sbjct: 272 --RVLPPVYQSTQ 282
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 132/325 (40%), Gaps = 43/325 (13%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK---NRELQLMRLMDHPNVISLKHCFFS 141
+G+G+FG+ + ++ E VA+K + + + RE+ R + HPN++ K +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 142 TTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
T L +VMEY E R+ R + + Q+ G++Y H +
Sbjct: 87 PTH-----LAIVMEYASGGELFERICN-----AGRFSEDEARFFFQQLISGVSYCHAM-Q 135
Query: 200 VCHRDVKPQNLLVDPL-THQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYT 258
VCHRD+K +N L+D ++K+C FG +K V + + Y APE++
Sbjct: 136 VCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDG 195
Query: 259 TSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQ 318
D+WS G L +L+G F + I R +N Y +
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH----------RILNVQYAIPDYVH 245
Query: 319 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 378
I PE L SR+ P+ R + E H +F L+ A L N
Sbjct: 246 IS-------------PECRHLISRIFVADPAKRISIPEIRNHEWF--LKNLPADLMNDNT 290
Query: 379 FPPLFNFKQELAGASPELINRLIPE 403
F+ + + G S E I ++I E
Sbjct: 291 MTTQFD-ESDQPGQSIEEIMQIIAE 314
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 112/220 (50%), Gaps = 25/220 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
+ F KD L +VMEYV M+ L+ R + + Y QI Y+
Sbjct: 107 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYL 157
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPELIFG 253
H++ + +RD+KP+NLL+D + +++ DFG AK VKG +C Y AP +I
Sbjct: 158 HSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEYLAPAIIL- 211
Query: 254 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+ Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 117/259 (45%), Gaps = 26/259 (10%)
Query: 48 AAVIQGNDA---VTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGET 104
A + QG A T + IS N + + + V+G GSFG V ++ T E
Sbjct: 309 AKIGQGTKAPEEKTANTISKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDEL 368
Query: 105 VAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYV 157
A+K + +D ++ +++ ++ L P ++ H F T + L VMEYV
Sbjct: 369 YAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR----LYFVMEYV 424
Query: 158 --PETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPL 215
+ MY + R + Y +I GL ++ + G+ +RD+K N+++D
Sbjct: 425 NGGDLMYHI-----QQVGRFKEPHAVFYAAEIAIGLFFLQS-KGIIYRDLKLDNVMLDSE 478
Query: 216 THQVKLCDFGSAKVLVKGEANISYICSR-YYRAPELIFGATEYTTSIDIWSAGCVLAELL 274
H +K+ DFG K + C Y APE+I Y S+D W+ G +L E+L
Sbjct: 479 GH-IKIADFGMCKENIWDGVTTKXFCGTPDYIAPEII-AYQPYGKSVDWWAFGVLLYEML 536
Query: 275 LGQPLFPGENAVDQLVEII 293
GQ F GE+ D+L + I
Sbjct: 537 AGQAPFEGEDE-DELFQSI 554
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 125/283 (44%), Gaps = 45/283 (15%)
Query: 80 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--RELQLMRLMD-HPNVISLK 136
+ ++ +G GSF I + ++ + A+K ++ R N +E+ ++L + HPN++ L
Sbjct: 14 LKDKPLGEGSFSICRKCVHKKSNQAFAVK-IISKRMEANTQKEITALKLCEGHPNIVKLH 72
Query: 137 HCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
F D+L LVME + E R+ K I KL + ++++
Sbjct: 73 EVF-----HDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVS-----AVSHM 122
Query: 195 HTVPGVCHRDVKPQNLLVDPLTH--QVKLCDFGSAKVLVKGEANISYIC-SRYYRAPELI 251
H V GV HRD+KP+NLL ++K+ DFG A++ + C + +Y APEL+
Sbjct: 123 HDV-GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELL 181
Query: 252 FGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN---AVDQLVEIIKVLGTPTREEIRCMN 308
Y S D+WS G +L +L GQ F + VEI+K +
Sbjct: 182 -NQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKK---------- 230
Query: 309 PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 351
DF F + W K + EA DL LL P+ R
Sbjct: 231 ---GDFSF---EGEAW-----KNVSQEAKDLIQGLLTVDPNKR 262
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 133/315 (42%), Gaps = 74/315 (23%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-----NRELQLMRLMDHPNVI---- 133
+ +G G++G V A T E VA+K V R +E+ + ++++H NV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 134 -----SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIF 188
++++ F S ELF + + MP + + +Q+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLM 114
Query: 189 RGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV---------LVKGEANISY 239
G+ Y+H + G+ HRD+KP+NLL+D +K+ DFG A V L K + Y
Sbjct: 115 AGVVYLHGI-GITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 240 ICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 299
+ APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 173 V------APELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------- 216
Query: 300 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 359
Y+D++ + +PW K++ + L ++L +PS R T +
Sbjct: 217 -----------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARITIPDIKK 260
Query: 360 HPFFDELREPNARLP 374
++++ + A+ P
Sbjct: 261 DRWYNKPLKKGAKRP 275
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 137/320 (42%), Gaps = 50/320 (15%)
Query: 85 VGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFS 141
+G G+FG V +CL+ VA+K + +Y+ + ++ ++ F
Sbjct: 36 LGEGTFGKV--VECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLC 93
Query: 142 TTSKDELFLN----LVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV 197
D + + E + + + LK + Q PL +V+ YQ+ L ++H
Sbjct: 94 VLMSDWFNFHGHMCIAFELLGKNTFEFLK--ENNFQPYPLPHVRHMAYQLCHALRFLHE- 150
Query: 198 PGVCHRDVKPQNLLV-----DPLTHQVKLC-------------DFGSAKVLVKGEANISY 239
+ H D+KP+N+L + L ++ K C DFGSA E + +
Sbjct: 151 NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--DHEHHTTI 208
Query: 240 ICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG-- 297
+ +R+YR PE+I + D+WS GC+L E G LF + LV + K+LG
Sbjct: 209 VATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPI 267
Query: 298 -----TPTREEIR------CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAI---DLASRL 343
TR++ + N +D R+ + P K + + E + DL R+
Sbjct: 268 PSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPL-KSYMLQDSLEHVQLFDLMRRM 326
Query: 344 LQYSPSLRCTALEACAHPFF 363
L++ P+ R T EA HPFF
Sbjct: 327 LEFDPAQRITLAEALLHPFF 346
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 133/315 (42%), Gaps = 74/315 (23%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-----NRELQLMRLMDHPNVI---- 133
+ +G G++G V A T E VA+K V R +E+ + ++++H NV+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 72
Query: 134 -----SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIF 188
++++ F S ELF + + MP + + +Q+
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLM 115
Query: 189 RGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV---------LVKGEANISY 239
G+ Y+H + G+ HRD+KP+NLL+D +K+ DFG A V L K + Y
Sbjct: 116 AGVVYLHGI-GITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 173
Query: 240 ICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 299
+ APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 174 V------APELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------- 217
Query: 300 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 359
Y+D++ + +PW K++ + L ++L +PS R T +
Sbjct: 218 -----------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARITIPDIKK 261
Query: 360 HPFFDELREPNARLP 374
++++ + A+ P
Sbjct: 262 DRWYNKPLKKGAKRP 276
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 137/320 (42%), Gaps = 50/320 (15%)
Query: 85 VGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFS 141
+G G+FG V +CL+ VA+K + +Y+ + ++ ++ F
Sbjct: 27 LGEGTFGKV--VECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLC 84
Query: 142 TTSKDELFLN----LVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV 197
D + + E + + + LK + Q PL +V+ YQ+ L ++H
Sbjct: 85 VLMSDWFNFHGHMCIAFELLGKNTFEFLK--ENNFQPYPLPHVRHMAYQLCHALRFLHE- 141
Query: 198 PGVCHRDVKPQNLLV-----DPLTHQVKLC-------------DFGSAKVLVKGEANISY 239
+ H D+KP+N+L + L ++ K C DFGSA E + +
Sbjct: 142 NQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--DHEHHTTI 199
Query: 240 ICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG-- 297
+ +R+YR PE+I + D+WS GC+L E G LF + LV + K+LG
Sbjct: 200 VATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPI 258
Query: 298 -----TPTREEIR------CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAI---DLASRL 343
TR++ + N +D R+ + P K + + E + DL R+
Sbjct: 259 PSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPL-KSYMLQDSLEHVQLFDLMRRM 317
Query: 344 LQYSPSLRCTALEACAHPFF 363
L++ P+ R T EA HPFF
Sbjct: 318 LEFDPAQRITLAEALLHPFF 337
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 133/309 (43%), Gaps = 62/309 (20%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-----NRELQLMRLMDHPNVI---- 133
+ +G G+ G V A T E VA+K V R +E+ + ++++H NV+
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 134 -----SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIF 188
++++ F S ELF + + MP + + +Q+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLM 114
Query: 189 RGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG--EANISYICSRY-Y 245
G+ Y+H + G+ HRD+KP+NLL+D +K+ DFG A V E ++ +C Y
Sbjct: 115 AGVVYLHGI-GITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 305
APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------- 216
Query: 306 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 365
Y+D++ + +PW K++ + L ++L +PS R T + ++++
Sbjct: 217 -----YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK 266
Query: 366 LREPNARLP 374
+ A+ P
Sbjct: 267 PLKKGAKRP 275
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 124/288 (43%), Gaps = 62/288 (21%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-----NRELQLMRLMDHPNVI---- 133
+ +G G++G V A T E VA+K V R +E+ + +++H NV+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYG 72
Query: 134 -----SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIF 188
++++ F S ELF + + MP + + +Q+
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLM 115
Query: 189 RGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG--EANISYICSRY-Y 245
G+ Y+H + G+ HRD+KP+NLL+D +K+ DFG A V E ++ +C Y
Sbjct: 116 AGVVYLHGI-GITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR 305
APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------------- 217
Query: 306 CMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 353
Y+D++ + +PW K++ + L ++L +PS R T
Sbjct: 218 -----YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARIT 255
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 129/295 (43%), Gaps = 46/295 (15%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVA-----IKKVLQDRRYKNRELQLMRLMDHPNVI 133
YM +G G FGIV +C+ET +K D+ +E+ ++ + H N++
Sbjct: 7 YMIAEDLGRGEFGIVH--RCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNIL 64
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGL 191
L F S +EL + + E++ + R+ +N+R + YV +Q+ L
Sbjct: 65 HLHESF---ESMEELVM--IFEFISGLDIFERINTSAFELNEREIVSYV----HQVCEAL 115
Query: 192 AYIHTVPGVCHRDVKPQNLLVDPL-THQVKLCDFGSAKVLVKGEANISYICSRYYRAPEL 250
++H+ + H D++P+N++ + +K+ +FG A+ L G+ + Y APE
Sbjct: 116 QFLHS-HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPE- 173
Query: 251 IFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPN 310
+ +T+ D+WS G ++ LL G F E Q++E I MN
Sbjct: 174 VHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN-QQIIENI-------------MNAE 219
Query: 311 YTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 365
YT + + K + EA+D RLL R TA EA HP+ +
Sbjct: 220 YT-----------FDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ 263
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 104/214 (48%), Gaps = 26/214 (12%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------RELQLMRLMDHPNVISLKH 137
+G G V+ A+ VAIK + R K RE+ + H N++S+
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM-- 76
Query: 138 CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV 197
+D+ + LVMEY+ L Y + + + +T QI G+ + H +
Sbjct: 77 --IDVDEEDDCYY-LVMEYIEGP---TLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM 130
Query: 198 PGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS----YICSRYYRAPELIFG 253
+ HRD+KPQN+L+D +K+ DFG AK L E +++ + + Y +PE G
Sbjct: 131 R-IVHRDIKPQNILIDS-NKTLKIFDFGIAKAL--SETSLTQTNHVLGTVQYFSPEQAKG 186
Query: 254 -ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV 286
AT+ T DI+S G VL E+L+G+P F GE AV
Sbjct: 187 EATDECT--DIYSIGIVLYEMLVGEPPFNGETAV 218
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 112/220 (50%), Gaps = 25/220 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISL 135
+ +GTGSFG V K E+G A+K + + + K ++++ +++ ++ P ++ L
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 136 KHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
+ F KD L +VMEYV M+ L+ R + + Y QI Y+
Sbjct: 107 EFSF-----KDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYL 157
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPELIFG 253
H++ + +RD+KP+NLL+D + +++ DFG AK VKG +C APE+I
Sbjct: 158 HSLD-LIYRDLKPENLLIDQQGY-IQVTDFGFAK-RVKGRT--WXLCGTPEALAPEIIL- 211
Query: 254 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+ Y ++D W+ G ++ E+ G P F + + Q+ E I
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKI 250
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFS-- 141
++G+G FG VF+AK G+T I++V + RE++ + +DH N++ C+
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFD 78
Query: 142 ---TTSKDEL-------------------FLNLVMEYVPETMYRVLKHYSSMNQRMPLIY 179
TS D L L + ME+ + + ++
Sbjct: 79 YDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLA 138
Query: 180 VKLYTYQIFRGLAYIHTVPGVCHRDVKPQNL-LVDPLTHQVKLCDFGSAKVLVKGEANIS 238
++L+ QI +G+ YIH+ + HRD+KP N+ LVD T QVK+ DFG L
Sbjct: 139 LELFE-QITKGVDYIHS-KKLIHRDLKPSNIFLVD--TKQVKIGDFGLVTSLKNDGKRTR 194
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL 274
+ Y +PE I + +Y +D+++ G +LAELL
Sbjct: 195 SKGTLRYMSPEQI-SSQDYGKEVDLYALGLILAELL 229
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 119/275 (43%), Gaps = 51/275 (18%)
Query: 102 GETVAIKKVLQDRRYKNRELQLMR-LMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPE- 159
G + + ++V + R +E+ ++R + HPN+I LK + + T F LV + + +
Sbjct: 55 GGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT-----FFFLVFDLMKKG 109
Query: 160 TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGL----AYIHTVPGVCHRDVKPQNLLVDPL 215
++ L +++++ T +I R L +H + + HRD+KP+N+L+D
Sbjct: 110 ELFDYLTEKVTLSEKE--------TRKIMRALLEVICALHKL-NIVHRDLKPENILLDD- 159
Query: 216 THQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATE-----YTTSIDIWSAGCVL 270
+KL DFG + L GE + Y APE+I + Y +D+WS G ++
Sbjct: 160 DMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219
Query: 271 AELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHK 330
LL G P F + L I M+ NY Q + W
Sbjct: 220 YTLLAGSPPFWHRKQMLMLRMI--------------MSGNY------QFGSPEWDD---- 255
Query: 331 RMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 365
DL SR L P R TA EA AHPFF +
Sbjct: 256 -YSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 133/315 (42%), Gaps = 74/315 (23%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-----NRELQLMRLMDHPNVI---- 133
+ +G G++G V A T E VA+K V R +E+ + ++++H NV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 134 -----SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIF 188
++++ F S ELF + + MP + + +Q+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLM 114
Query: 189 RGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV---------LVKGEANISY 239
G+ Y+H + G+ HRD+KP+NLL+D +K+ DFG A V L K + Y
Sbjct: 115 AGVVYLHGI-GITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 240 ICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 299
+ APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 173 V------APELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSXQE-------- 216
Query: 300 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 359
Y+D++ + +PW K++ + L ++L +PS R T +
Sbjct: 217 -----------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARITIPDIKK 260
Query: 360 HPFFDELREPNARLP 374
++++ + A+ P
Sbjct: 261 DRWYNKPLKKGAKRP 275
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 119/275 (43%), Gaps = 51/275 (18%)
Query: 102 GETVAIKKVLQDRRYKNRELQLMR-LMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPE- 159
G + + ++V + R +E+ ++R + HPN+I LK + + T F LV + + +
Sbjct: 42 GGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT-----FFFLVFDLMKKG 96
Query: 160 TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGL----AYIHTVPGVCHRDVKPQNLLVDPL 215
++ L +++++ T +I R L +H + + HRD+KP+N+L+D
Sbjct: 97 ELFDYLTEKVTLSEKE--------TRKIMRALLEVICALHKL-NIVHRDLKPENILLDD- 146
Query: 216 THQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATE-----YTTSIDIWSAGCVL 270
+KL DFG + L GE + Y APE+I + Y +D+WS G ++
Sbjct: 147 DMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 206
Query: 271 AELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHK 330
LL G P F + L I M+ NY Q + W
Sbjct: 207 YTLLAGSPPFWHRKQMLMLRMI--------------MSGNY------QFGSPEWDD---- 242
Query: 331 RMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 365
DL SR L P R TA EA AHPFF +
Sbjct: 243 -YSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 155/364 (42%), Gaps = 63/364 (17%)
Query: 55 DAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLE---TGETVAIKKVL 111
D GH+I +G E + +S +G G+FG V Q C++ G VA+K +
Sbjct: 17 DDAEGHLI-YHVGDWLQERYEIVS-----TLGEGTFGRVVQ--CVDHRRGGARVALKIIK 68
Query: 112 QDRRYKNR---ELQLMRLM-----DHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYR 163
+YK E+ ++ + D+ N+ +F + + E + + +
Sbjct: 69 NVEKYKEAARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGH----MCISFELLGLSTFD 124
Query: 164 VLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLV----DPLTHQ- 218
LK + + P+ V+ +Q+ + + ++H + H D+KP+N+L LT+
Sbjct: 125 FLKDNNYLP--YPIHQVRHMAFQLCQAVKFLHD-NKLTHTDLKPENILFVNSDYELTYNL 181
Query: 219 -------------VKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWS 265
V++ DFGSA E + + + +R+YRAPE+I ++ D+WS
Sbjct: 182 EKKRDERSVKSTAVRVVDFGSATF--DHEHHSTIVSTRHYRAPEVILELG-WSQPCDVWS 238
Query: 266 AGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC-------------MNPNYT 312
GC++ E +G LF + + L + ++LG IR + N +
Sbjct: 239 IGCIIFEYYVGFTLFQTHDNREHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTS 298
Query: 313 DFRFPQIKAHPWHKVFHKRMPP--EAIDLASRLLQYSPSLRCTALEACAHPFFDELR-EP 369
R+ + P + + DL +L+Y P+ R T EA HPFF LR EP
Sbjct: 299 AGRYVRENCKPLRRYLTSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQHPFFARLRAEP 358
Query: 370 NARL 373
+L
Sbjct: 359 PNKL 362
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 24/217 (11%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--------RELQLMRLMDH 129
+Y + +G G+F V A+ + TG+ VA+K + D+ N RE+++ ++++H
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKII--DKTQLNSSSLQKLFREVRIXKVLNH 72
Query: 130 PNVISLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQI 187
PN++ L + E L LV EY E ++ H + + QI
Sbjct: 73 PNIVKLFEVI-----ETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKF-----RQI 122
Query: 188 FRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRA 247
+ Y H + HRD+K +NLL+D +K+ DFG + G ++ + Y A
Sbjct: 123 VSAVQYCHQ-KFIVHRDLKAENLLLDA-DXNIKIADFGFSNEFTFGNKLDAFCGAPPYAA 180
Query: 248 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 284
PEL G +D+WS G +L L+ G F G+N
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 133/315 (42%), Gaps = 74/315 (23%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-----NRELQLMRLMDHPNVI---- 133
+ +G G++G V A T E VA+K V R +E+ + ++++H NV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 134 -----SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIF 188
++++ F S ELF + + MP + + +Q+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLM 114
Query: 189 RGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV---------LVKGEANISY 239
G+ Y+H + G+ HRD+KP+NLL+D +K+ DFG A V L K + Y
Sbjct: 115 AGVVYLHGI-GITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 240 ICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 299
+ APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 173 V------APELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------- 216
Query: 300 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA 359
Y+D++ + +PW K++ + L ++L +PS R T +
Sbjct: 217 -----------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARITIPDIKK 260
Query: 360 HPFFDELREPNARLP 374
++++ + A+ P
Sbjct: 261 DRWYNKPLKKGAKRP 275
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 126/307 (41%), Gaps = 61/307 (19%)
Query: 74 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIK----KVLQDRRYKN--RELQLMRLM 127
K + +Y + +G G+F +V + TG A K K L R ++ RE ++ R +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 128 DHPNVI---------SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
HPN++ S + F + ELF ++V + YS + +
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR----------EFYSEADASHCI- 111
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTH--QVKLCDFGSAKVLVKGEAN 236
QI +AY H+ G+ HR++KP+NLL+ VKL DFG A + EA
Sbjct: 112 ------QQILESIAYCHS-NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW 164
Query: 237 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 296
+ + Y +PE + Y+ +DIW+ G +L LL+G P F E+ +I
Sbjct: 165 HGFAGTPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI---- 219
Query: 297 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 356
D+ P+ W V PEA L +L +P R TA +
Sbjct: 220 -----------KAGAYDYPSPE-----WDTV-----TPEAKSLIDSMLTVNPKKRITADQ 258
Query: 357 ACAHPFF 363
A P+
Sbjct: 259 ALKVPWI 265
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 127/303 (41%), Gaps = 52/303 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F IV + + TG+ A K ++ RR + RE+ ++R + HPN+I
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYA-AKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 71
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
+L F + T + L++E V ++ L S+ + ++K QI G+
Sbjct: 72 TLHDIFENKTD-----VVLILELVSGGELFDFLAEKESLTEDEATQFLK----QILDGVH 122
Query: 193 YIHTVPGVCHRDVKPQNLLV---DPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
Y+H+ + H D+KP+N+++ + ++KL DFG A + G + + + APE
Sbjct: 123 YLHS-KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPE 181
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
++ D+WS G + LL G F GE + L I V
Sbjct: 182 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV-------------- 226
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 369
NY DF + + A D RLL P R T ++ H + +R
Sbjct: 227 NY-DF----------DEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRR 275
Query: 370 NAR 372
N R
Sbjct: 276 NVR 278
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 126/307 (41%), Gaps = 61/307 (19%)
Query: 74 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIK----KVLQDRRYKN--RELQLMRLM 127
K + +Y + +G G+F +V + TG A K K L R ++ RE ++ R +
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 128 DHPNVI---------SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
HPN++ S + F + ELF ++V + YS + +
Sbjct: 62 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR----------EFYSEADASHCI- 110
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTH--QVKLCDFGSAKVLVKGEAN 236
QI +AY H+ G+ HR++KP+NLL+ VKL DFG A + EA
Sbjct: 111 ------QQILESIAYCHS-NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW 163
Query: 237 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 296
+ + Y +PE + Y+ +DIW+ G +L LL+G P F E+ +I
Sbjct: 164 HGFAGTPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI---- 218
Query: 297 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 356
D+ P+ W V PEA L +L +P R TA +
Sbjct: 219 -----------KAGAYDYPSPE-----WDTV-----TPEAKSLIDSMLTVNPKKRITADQ 257
Query: 357 ACAHPFF 363
A P+
Sbjct: 258 ALKVPWI 264
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----RELQLMRLMDHPNVI 133
Y + V+G+G+ +V A C E VAIK++ ++ + +E+Q M HPN++
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 76
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIY----VKLYTYQIF 188
S + S KDEL+ LVM+ + ++ ++KH + + + + ++
Sbjct: 77 SY---YTSFVVKDELW--LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 189 RGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG------EANISYICS 242
GL Y+H G HRDVK N+L+ V++ DFG + L G + +++ +
Sbjct: 132 EGLEYLHK-NGQIHRDVKAGNILLGE-DGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 243 RYYRAPELIFGATEYTTSIDIWSAGCVLAELLLG 276
+ APE++ Y DIWS G EL G
Sbjct: 190 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 223
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 126/307 (41%), Gaps = 61/307 (19%)
Query: 74 KQTISYMAERVVGTGSFGIVFQAKCLETGETVAIK----KVLQDRRYKN--RELQLMRLM 127
K + +Y + +G G+F +V + TG A K K L R ++ RE ++ R +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 128 DHPNVI---------SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLI 178
HPN++ S + F + ELF ++V + YS + +
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR----------EFYSEADASHCI- 111
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTH--QVKLCDFGSAKVLVKGEAN 236
QI +AY H+ G+ HR++KP+NLL+ VKL DFG A + EA
Sbjct: 112 ------QQILESIAYCHS-NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW 164
Query: 237 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 296
+ + Y +PE + Y+ +DIW+ G +L LL+G P F E+ +I
Sbjct: 165 HGFAGTPGYLSPE-VLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI---- 219
Query: 297 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 356
D+ P+ W V PEA L +L +P R TA +
Sbjct: 220 -----------KAGAYDYPSPE-----WDTV-----TPEAKSLIDSMLTVNPKKRITADQ 258
Query: 357 ACAHPFF 363
A P+
Sbjct: 259 ALKVPWI 265
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----RELQLMRLMDHPNVI 133
Y + V+G+G+ +V A C E VAIK++ ++ + +E+Q M HPN++
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIV 71
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIY----VKLYTYQIF 188
S + S KDEL+ LVM+ + ++ ++KH + + + + ++
Sbjct: 72 SY---YTSFVVKDELW--LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 189 RGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG------EANISYICS 242
GL Y+H G HRDVK N+L+ V++ DFG + L G + +++ +
Sbjct: 127 EGLEYLHK-NGQIHRDVKAGNILLGE-DGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
Query: 243 RYYRAPELIFGATEYTTSIDIWSAGCVLAELLLG 276
+ APE++ Y DIWS G EL G
Sbjct: 185 PCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 218
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 23/220 (10%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-------LMRLMDHPNVISLK 136
V+G GSFG V ++ T E A+K + +D ++ +++ ++ L P ++
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 137 HCFFSTTSKDELFLNLVMEYV--PETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
H F T + L VMEYV + MY + R + Y +I GL ++
Sbjct: 87 HSCFQTMDR----LYFVMEYVNGGDLMYHI-----QQVGRFKEPHAVFYAAEIAIGLFFL 137
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPELIFG 253
+ G+ +RD+K N+++D H +K+ DFG K + C Y APE+I
Sbjct: 138 QS-KGIIYRDLKLDNVMLDSEGH-IKIADFGMCKENIWDGVTTKXFCGTPDYIAPEII-A 194
Query: 254 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
Y S+D W+ G +L E+L GQ F GE+ D+L + I
Sbjct: 195 YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-DELFQSI 233
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 103/224 (45%), Gaps = 20/224 (8%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRLMDHPNV 132
Y+ + +G GSFG K E G IK++ ++R RE+ ++ M HPN+
Sbjct: 26 YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNI 85
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRG 190
+ + F S L +VM+Y + R+ + Q ++ + QI
Sbjct: 86 VQYRESFEENGS-----LYIVMDYCEGGDLFKRINAQKGVLFQEDQILD---WFVQICLA 137
Query: 191 LAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG-EANISYICSRYYRAPE 249
L ++H + HRD+K QN+ + V+L DFG A+VL E + I + YY +PE
Sbjct: 138 LKHVHDRK-ILHRDIKSQNIFLTK-DGTVQLGDFGIARVLNSTVELARACIGTPYYLSPE 195
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
I Y DIW+ GCVL EL + F + + +++II
Sbjct: 196 -ICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKII 238
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 135/291 (46%), Gaps = 42/291 (14%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIK-----KVLQDRRYKN--RELQLMRLMDHPNVISL 135
R +G GSFG V + +T + A+K K ++ +N +ELQ+M+ ++HP +++L
Sbjct: 21 RAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNL 80
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
+ F +DE + +V++ + + L+++ N VKL+ ++ L Y+
Sbjct: 81 WYSF-----QDEEDMFMVVDLL---LGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQ 132
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFG-- 253
+ HRD+KP N+L+D H V + DF A +L + + ++ Y APE+
Sbjct: 133 N-QRIIHRDMKPDNILLDEHGH-VHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRK 190
Query: 254 ATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP--------TREEI- 304
Y+ ++D WS G ELL G+ + ++ EI+ T ++E +
Sbjct: 191 GAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS-KEIVHTFETTVVTYPSAWSQEMVS 249
Query: 305 ---RCMNPNYTDFRFPQ---IKAHP------WHKVFHKRMPPEAIDLASRL 343
+ + PN D RF Q ++ P W VF KR+ P I RL
Sbjct: 250 LLKKLLEPN-PDQRFSQLSDVQNFPYMNDINWDAVFQKRLIPGFIPNKGRL 299
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 136/303 (44%), Gaps = 48/303 (15%)
Query: 76 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-LMRLMDHPNVIS 134
T Y + +G GS+ + + T A+K + + +R E++ L+R HPN+I+
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIIT 80
Query: 135 LKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKH-YSSMNQRMPLIYVKLYTYQIFRGL 191
LK + D ++ +V E + E + ++L+ + S + +++ I + +
Sbjct: 81 LKDVY-----DDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFT------ITKTV 129
Query: 192 AYIHTVPGVCHRDVKPQNLL-VDPLTH--QVKLCDFGSAKVLVKGEANISYIC-SRYYRA 247
Y+H GV HRD+KP N+L VD + +++CDFG AK L + C + + A
Sbjct: 130 EYLHA-QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVA 188
Query: 248 PELIFGATEYTTSIDIWSAGCVLAELLLG-QPLFPGENAVDQLVEIIKVLGTPTREEIRC 306
PE + Y + DIWS G +L +L G P G + D EI+ +G+
Sbjct: 189 PE-VLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD--DTPEEILARIGSG------- 238
Query: 307 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF---F 363
+F + W+ V A DL S++L P R TA HP+ +
Sbjct: 239 --------KF-SLSGGYWNSV-----SDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHW 284
Query: 364 DEL 366
D+L
Sbjct: 285 DQL 287
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 128/309 (41%), Gaps = 50/309 (16%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQD-------RRYKNRELQLMRLMDHPNVISLKH 137
+G G F F+ +T E A K V + R + E+ + R + H +V+ H
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF-H 83
Query: 138 CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV 197
FF +D F+ +V+E R L + + + Y QI G Y+H
Sbjct: 84 GFF----EDNDFVFVVLELC---RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR- 135
Query: 198 PGVCHRDVKPQNLLVDPLTHQVKLCDFGSA-KVLVKGEANISYICSRYYRAPELIFGATE 256
V HRD+K NL ++ +VK+ DFG A KV GE + + Y APE +
Sbjct: 136 NRVIHRDLKLGNLFLNE-DLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPE-VLSKKG 193
Query: 257 YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRF 316
++ +D+WS GC++ LL+G+P F E C+ Y
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPF----------------------ETSCLKETYL---- 227
Query: 317 PQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLP-N 375
+IK + + K + P A L ++LQ P+ R T E FF P ARLP
Sbjct: 228 -RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP-ARLPIT 283
Query: 376 GRPFPPLFN 384
PP F+
Sbjct: 284 CLTIPPXFS 292
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 124/294 (42%), Gaps = 74/294 (25%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK-----NRELQLMRLMDHPNVI---- 133
+ +G G++G V A T E VA+K V R +E+ + ++++H NV+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 134 -----SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIF 188
++++ F S ELF + + MP + + +Q+
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRI-----------------EPDIGMPEPDAQRFFHQLM 114
Query: 189 RGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV---------LVKGEANISY 239
G+ Y+H + G+ HRD+KP+NLL+D +K+ DFG A V L K + Y
Sbjct: 115 AGVVYLHGI-GITHRDIKPENLLLDE-RDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 240 ICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 299
+ APEL+ + +D+WS G VL +L G+ P + D E
Sbjct: 173 V------APELLKRREFHAEPVDVWSCGIVLTAMLAGE--LPWDQPSDSCQE-------- 216
Query: 300 TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 353
Y+D++ + +PW K++ + L ++L +PS R T
Sbjct: 217 -----------YSDWKEKKTYLNPW-----KKIDSAPLALLHKILVENPSARIT 254
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 128/309 (41%), Gaps = 50/309 (16%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQD-------RRYKNRELQLMRLMDHPNVISLKH 137
+G G F F+ +T E A K V + R + E+ + R + H +V+ H
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF-H 83
Query: 138 CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV 197
FF +D F+ +V+E R L + + + Y QI G Y+H
Sbjct: 84 GFF----EDNDFVFVVLELC---RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR- 135
Query: 198 PGVCHRDVKPQNLLVDPLTHQVKLCDFGSA-KVLVKGEANISYICSRYYRAPELIFGATE 256
V HRD+K NL ++ +VK+ DFG A KV GE + + Y APE +
Sbjct: 136 NRVIHRDLKLGNLFLNE-DLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPE-VLSKKG 193
Query: 257 YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRF 316
++ +D+WS GC++ LL+G+P F E C+ Y
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPF----------------------ETSCLKETYL---- 227
Query: 317 PQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLP-N 375
+IK + + K + P A L ++LQ P+ R T E FF P ARLP
Sbjct: 228 -RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP-ARLPIT 283
Query: 376 GRPFPPLFN 384
PP F+
Sbjct: 284 CLTIPPRFS 292
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 128/309 (41%), Gaps = 50/309 (16%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQD-------RRYKNRELQLMRLMDHPNVISLKH 137
+G G F F+ +T E A K V + R + E+ + R + H +V+ H
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF-H 87
Query: 138 CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV 197
FF +D F+ +V+E R L + + + Y QI G Y+H
Sbjct: 88 GFF----EDNDFVFVVLELC---RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR- 139
Query: 198 PGVCHRDVKPQNLLVDPLTHQVKLCDFGSA-KVLVKGEANISYICSRYYRAPELIFGATE 256
V HRD+K NL ++ +VK+ DFG A KV GE + + Y APE +
Sbjct: 140 NRVIHRDLKLGNLFLNE-DLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPE-VLSKKG 197
Query: 257 YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRF 316
++ +D+WS GC++ LL+G+P F E C+ Y
Sbjct: 198 HSFEVDVWSIGCIMYTLLVGKPPF----------------------ETSCLKETYL---- 231
Query: 317 PQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLP-N 375
+IK + + K + P A L ++LQ P+ R T E FF P ARLP
Sbjct: 232 -RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP-ARLPIT 287
Query: 376 GRPFPPLFN 384
PP F+
Sbjct: 288 CLTIPPRFS 296
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 130/325 (40%), Gaps = 43/325 (13%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK---NRELQLMRLMDHPNVISLKHCFFS 141
+G G+FG+ + + E VA+K + + + RE+ R + HPN++ K +
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 142 TTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
T L +VMEY E R+ R + + Q+ G++Y H +
Sbjct: 87 PTH-----LAIVMEYASGGELFERICN-----AGRFSEDEARFFFQQLISGVSYAHAM-Q 135
Query: 200 VCHRDVKPQNLLVDPL-THQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYT 258
V HRD+K +N L+D ++K+ DFG +K V S + + Y APE++
Sbjct: 136 VAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDG 195
Query: 259 TSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQ 318
D+WS G L +L+G F + I R +N Y +
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIH----------RILNVQYAIPDYVH 245
Query: 319 IKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 378
I PE L SR+ P+ R + E H +F L+ A L N
Sbjct: 246 IS-------------PECRHLISRIFVADPAKRISIPEIRNHEWF--LKNLPADLMNDNT 290
Query: 379 FPPLFNFKQELAGASPELINRLIPE 403
F+ + + G S E I ++I E
Sbjct: 291 MTTQFD-ESDQPGQSIEEIMQIIAE 314
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 143/333 (42%), Gaps = 66/333 (19%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKV----------LQDRRYKNRELQLMRLMDHPNVI 133
V+G G+F +V + ETG+ A+K V L K RE + ++ HP+++
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK-REASICHMLKHPHIV 89
Query: 134 SLKHCFFSTTSKDELFLNLVMEYV--PETMYRVLKHYSSMNQRMPLIYVKL----YTYQI 187
L T S D + L +V E++ + + ++K + +Y + Y QI
Sbjct: 90 EL----LETYSSDGM-LYMVFEFMDGADLCFEIVKRADA-----GFVYSEAVASHYMRQI 139
Query: 188 FRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANI---SYICS 242
L Y H + HRDVKP+N+L+ + VKL DFG A L GE+ + + +
Sbjct: 140 LEALRYCHD-NNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL--GESGLVAGGRVGT 196
Query: 243 RYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 302
++ APE++ Y +D+W G +L LL G F G ++L E I + G
Sbjct: 197 PHFMAPEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGI-IKGKYK-- 250
Query: 303 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
MNP W + A DL R+L P+ R T EA HP+
Sbjct: 251 ----MNPR------------QWSHI-----SESAKDLVRRMLMLDPAERITVYEALNHPW 289
Query: 363 FDELREPNA---RLPNGRPFPPLFNFKQELAGA 392
E R+ A LP FN +++L GA
Sbjct: 290 LKE-RDRYAYKIHLPETVEQLRKFNARRKLKGA 321
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 128/294 (43%), Gaps = 41/294 (13%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-LMRLMDHPNVISLKH 137
Y+ + +G GS+ + T A+K + + +R + E++ L+R HPN+I+LK
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKD 88
Query: 138 CFFSTTSKDELFLNLVMEYV--PETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
+ D + LV E + E + ++L+ + + + I + + Y+H
Sbjct: 89 VY-----DDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVL-----HTIGKTVEYLH 138
Query: 196 TVPGVCHRDVKPQNLL-VDPLTHQ--VKLCDFGSAKVLVKGEANISYIC-SRYYRAPELI 251
+ GV HRD+KP N+L VD + +++CDFG AK L + C + + APE +
Sbjct: 139 S-QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPE-V 196
Query: 252 FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 311
Y DIWS G +L +L G F D EI+ +G+
Sbjct: 197 LKRQGYDEGCDIWSLGILLYTMLAGYTPF-ANGPSDTPEEILTRIGSG------------ 243
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 365
+F + W+ V A DL S++L P R TA + HP+ +
Sbjct: 244 ---KF-TLSGGNWNTV-----SETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 139/320 (43%), Gaps = 54/320 (16%)
Query: 70 NGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIK-----KVLQDRRYKN------ 118
GE Q S M+ +G+G+FG V+ A E + V +K KVL+D ++
Sbjct: 19 EGEYSQKYSTMSP--LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKV 76
Query: 119 -RELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMN----- 172
E+ ++ ++H N+I + F +++ F LVME KH S ++
Sbjct: 77 TLEIAILSRVEHANIIKVLDIF-----ENQGFFQLVME----------KHGSGLDLFAFI 121
Query: 173 QRMPLIYVKLYTY---QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKV 229
R P + L +Y Q+ + Y+ + + HRD+K +N+++ +KL DFGSA
Sbjct: 122 DRHPRLDEPLASYIFRQLVSAVGYLR-LKDIIHRDIKDENIVIAE-DFTIKLIDFGSAAY 179
Query: 230 LVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVD- 287
L +G+ ++ + Y APE++ G +++WS G L L+ + P E V+
Sbjct: 180 LERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEA 239
Query: 288 ----------QLVEIIKVLGTPTREEIRCMNPNYTDFRFPQ---IKAHPWHKVFHKRMPP 334
+L+ ++ L P E + TD Q + + W +VF P
Sbjct: 240 AIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVNLADYTWEEVFRVNKPE 299
Query: 335 EAIDLASRLLQYSPSLRCTA 354
+ A+ L + SL A
Sbjct: 300 SGVLSAASLEMGNRSLSDVA 319
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 108/233 (46%), Gaps = 25/233 (10%)
Query: 71 GEPKQTISYMAER-----VVGTGSFGIVFQAKCLETGETVAIKKVLQDR--------RYK 117
G T S++++R ++G G V A+ L VA+K + D R++
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR 60
Query: 118 NRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPL 177
RE Q ++HP ++++ + T L +VMEYV R + H
Sbjct: 61 -REAQNAAALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 178 IYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI 237
I V Q L + H G+ HRDVKP N+L+ T+ VK+ DFG A+ + ++
Sbjct: 119 IEVIADACQ---ALNFSHQ-NGIIHRDVKPANILIS-ATNAVKVVDFGIARAIADSGNSV 173
Query: 238 ----SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV 286
+ I + Y +PE G + S D++S GCVL E+L G+P F G++ V
Sbjct: 174 XQTAAVIGTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 130/301 (43%), Gaps = 44/301 (14%)
Query: 85 VGTGSFGIVFQAKCLE--TGETVAIKKVLQ----DRRYKNRELQLMRLMDHPNVISLKHC 138
+G+G+FG+V +C+E TG K + D+ E+ +M + HP +I+L
Sbjct: 59 LGSGAFGVVH--RCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 116
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
F +D+ + L++E++ + + ++ + +M V Y Q GL ++H
Sbjct: 117 F-----EDKYEMVLILEFL--SGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE-H 168
Query: 199 GVCHRDVKPQNLLVD-PLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEY 257
+ H D+KP+N++ + VK+ DFG A L E + + APE++
Sbjct: 169 SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIV-DREPV 227
Query: 258 TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFP 317
D+W+ G + LL G F GE+ ++ L + RC D+ F
Sbjct: 228 GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVK-----------RC------DWEFD 270
Query: 318 QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFD-ELREPNARLPNG 376
+ F + PEA D LLQ P R T +A HP+ + +R+P+
Sbjct: 271 E-------DAF-SSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSRIPSS 322
Query: 377 R 377
R
Sbjct: 323 R 323
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 127/291 (43%), Gaps = 41/291 (14%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-LMRLMDHPNVISLKH 137
Y+ + +G GS+ + T A+K + + +R + E++ L+R HPN+I+LK
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKD 88
Query: 138 CFFSTTSKDELFLNLVMEYV--PETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
+ D + LV E + E + ++L+ + + + I + + Y+H
Sbjct: 89 VY-----DDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVL-----HTIGKTVEYLH 138
Query: 196 TVPGVCHRDVKPQNLL-VDPLTHQ--VKLCDFGSAKVLVKGEANISYIC-SRYYRAPELI 251
+ GV HRD+KP N+L VD + +++CDFG AK L + C + + APE +
Sbjct: 139 S-QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPE-V 196
Query: 252 FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNY 311
Y DIWS G +L +L G F D EI+ +G+
Sbjct: 197 LKRQGYDEGCDIWSLGILLYTMLAGYTPF-ANGPSDTPEEILTRIGSG------------ 243
Query: 312 TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
+F + W+ V A DL S++L P R TA + HP+
Sbjct: 244 ---KFT-LSGGNWNTV-----SETAKDLVSKMLHVDPHQRLTAKQVLQHPW 285
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 121/247 (48%), Gaps = 26/247 (10%)
Query: 69 KNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR-----ELQL 123
++ +P + + E +G G+FG V++AK ETG +A KV++ + + E+++
Sbjct: 5 RDLDPNEVWEIVGE--LGDGAFGKVYKAKNKETG-ALAAAKVIETKSEEELEDYIVEIEI 61
Query: 124 MRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLY 183
+ DHP ++ L ++ L +++E+ P + +++ + +++
Sbjct: 62 LATCDHPYIVKLLGAYYHDGK-----LWIMIEFCPGGAVDAI--MLELDRGLTEPQIQVV 114
Query: 184 TYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG-SAKVLVKGEANISYICS 242
Q+ L ++H+ + HRD+K N+L+ L ++L DFG SAK L + S+I +
Sbjct: 115 CRQMLEALNFLHS-KRIIHRDLKAGNVLM-TLEGDIRLADFGVSAKNLKTLQKRDSFIGT 172
Query: 243 RYYRAPELI----FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIK---- 294
Y+ APE++ T Y DIWS G L E+ +P N + L++I K
Sbjct: 173 PYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPP 232
Query: 295 VLGTPTR 301
L TP++
Sbjct: 233 TLLTPSK 239
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 121/247 (48%), Gaps = 26/247 (10%)
Query: 69 KNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR-----ELQL 123
++ +P + + E +G G+FG V++AK ETG +A KV++ + + E+++
Sbjct: 13 RDLDPNEVWEIVGE--LGDGAFGKVYKAKNKETG-ALAAAKVIETKSEEELEDYIVEIEI 69
Query: 124 MRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLY 183
+ DHP ++ L ++ L +++E+ P + +++ + +++
Sbjct: 70 LATCDHPYIVKLLGAYYHDGK-----LWIMIEFCPGGAVDAI--MLELDRGLTEPQIQVV 122
Query: 184 TYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFG-SAKVLVKGEANISYICS 242
Q+ L ++H+ + HRD+K N+L+ L ++L DFG SAK L + S+I +
Sbjct: 123 CRQMLEALNFLHS-KRIIHRDLKAGNVLM-TLEGDIRLADFGVSAKNLKTLQKRDSFIGT 180
Query: 243 RYYRAPELI----FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIK---- 294
Y+ APE++ T Y DIWS G L E+ +P N + L++I K
Sbjct: 181 PYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPP 240
Query: 295 VLGTPTR 301
L TP++
Sbjct: 241 TLLTPSK 247
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 30/217 (13%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN---RELQLMRLMDHPNVISLKHCFF 140
V+G G+FG V +A+ AIKK+ + E+ L+ ++H V+ +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 141 S--------TTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
T K + L + MEY L H ++NQ+ Y +L+ QI L+
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDE-YWRLFR-QILEALS 130
Query: 193 YIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK-------VLVKGEANI-------- 237
YIH+ G+ HRD+KP N+ +D + VK+ DFG AK +L N+
Sbjct: 131 YIHS-QGIIHRDLKPMNIFIDE-SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 238 SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL 274
S I + Y A E++ G Y ID++S G + E++
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 30/217 (13%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN---RELQLMRLMDHPNVISLKHCFF 140
V+G G+FG V +A+ AIKK+ + E+ L+ ++H V+ +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 141 S--------TTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
T K + L + MEY L H ++NQ+ Y +L+ QI L+
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE-YWRLFR-QILEALS 130
Query: 193 YIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK-------VLVKGEANI-------- 237
YIH+ G+ HRD+KP N+ +D + VK+ DFG AK +L N+
Sbjct: 131 YIHS-QGIIHRDLKPMNIFIDE-SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 238 SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL 274
S I + Y A E++ G Y ID++S G + E++
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 135/308 (43%), Gaps = 58/308 (18%)
Query: 72 EPKQTIS-YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL-------QL 123
+PK T++ + +++G G+FG V + TG A+K + ++ E+ ++
Sbjct: 4 DPKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 63
Query: 124 MRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYV--PETMYRVLKHYSSMNQRMPLIYVK 181
++ HP + +LK+ F + L VMEY E + + + +R +
Sbjct: 64 LQNTRHPFLTALKYAFQTHDR-----LCFVMEYANGGELFFHLSRERVFTEER-----AR 113
Query: 182 LYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYIC 241
Y +I L Y+H+ V +RD+K +NL++D H +K+ DFG K + A + C
Sbjct: 114 FYGAEIVSALEYLHS-RDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFC 171
Query: 242 SR-YYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 300
Y APE + +Y ++D W G V+ E++ G+ F ++ ++L E+I +
Sbjct: 172 GTPEYLAPE-VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM----- 224
Query: 301 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR-----CTAL 355
EEIR F + + PEA L + LL+ P R A
Sbjct: 225 -EEIR----------------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAK 261
Query: 356 EACAHPFF 363
E H FF
Sbjct: 262 EVMEHRFF 269
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 133/303 (43%), Gaps = 48/303 (15%)
Query: 76 TISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ-LMRLMDHPNVIS 134
T Y + +G GS+ + + T A+K + + +R E++ L+R HPN+I+
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQHPNIIT 80
Query: 135 LKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKH-YSSMNQRMPLIYVKLYTYQIFRGL 191
LK + D ++ +V E E + ++L+ + S + +++ I + +
Sbjct: 81 LKDVY-----DDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFT------ITKTV 129
Query: 192 AYIHTVPGVCHRDVKPQNLL-VDPLTH--QVKLCDFGSAKVLVKGEANISYIC-SRYYRA 247
Y+H GV HRD+KP N+L VD + +++CDFG AK L + C + + A
Sbjct: 130 EYLHA-QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVA 188
Query: 248 PELIFGATEYTTSIDIWSAGCVLAELLLG-QPLFPGENAVDQLVEIIKVLGTPTREEIRC 306
PE + Y + DIWS G +L L G P G + D EI+ +G+
Sbjct: 189 PE-VLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPD--DTPEEILARIGSG------- 238
Query: 307 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF---F 363
+F + W+ V A DL S+ L P R TA HP+ +
Sbjct: 239 --------KF-SLSGGYWNSV-----SDTAKDLVSKXLHVDPHQRLTAALVLRHPWIVHW 284
Query: 364 DEL 366
D+L
Sbjct: 285 DQL 287
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 127/309 (41%), Gaps = 50/309 (16%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQD-------RRYKNRELQLMRLMDHPNVISLKH 137
+G G F F+ +T E A K V + R + E+ + R + H +V+ H
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF-H 105
Query: 138 CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV 197
FF +D F+ +V+E R L + + + Y QI G Y+H
Sbjct: 106 GFF----EDNDFVFVVLELC---RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR- 157
Query: 198 PGVCHRDVKPQNLLVDPLTHQVKLCDFGSA-KVLVKGEANISYICSRYYRAPELIFGATE 256
V HRD+K NL ++ +VK+ DFG A KV GE + Y APE +
Sbjct: 158 NRVIHRDLKLGNLFLNE-DLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE-VLSKKG 215
Query: 257 YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRF 316
++ +D+WS GC++ LL+G+P F E C+ Y
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGKPPF----------------------ETSCLKETYL---- 249
Query: 317 PQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLP-N 375
+IK + + K + P A L ++LQ P+ R T E FF P ARLP
Sbjct: 250 -RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP-ARLPIT 305
Query: 376 GRPFPPLFN 384
PP F+
Sbjct: 306 CLTIPPRFS 314
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 123/298 (41%), Gaps = 49/298 (16%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQD-------RRYKNRELQLMRLMDHPNVISLKH 137
+G G F F+ +T E A K V + R + E+ + R + H +V+ H
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF-H 107
Query: 138 CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV 197
FF +D F+ +V+E R L + + + Y QI G Y+H
Sbjct: 108 GFF----EDNDFVFVVLELC---RRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR- 159
Query: 198 PGVCHRDVKPQNLLVDPLTHQVKLCDFGSA-KVLVKGEANISYICSRYYRAPELIFGATE 256
V HRD+K NL ++ +VK+ DFG A KV GE + Y APE +
Sbjct: 160 NRVIHRDLKLGNLFLNE-DLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE-VLSKKG 217
Query: 257 YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRF 316
++ +D+WS GC++ LL+G+P F E C+ Y
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGKPPF----------------------ETSCLKETYL---- 251
Query: 317 PQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLP 374
+IK + + K + P A L ++LQ P+ R T E FF P ARLP
Sbjct: 252 -RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP-ARLP 305
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 127/306 (41%), Gaps = 58/306 (18%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F IV + + TG+ A K ++ RR + RE+ ++R + HPN+I
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYA-AKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNII 92
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
+L F + T + L++E V ++ L S+ + ++K QI G+
Sbjct: 93 TLHDIFENKTD-----VVLILELVSGGELFDFLAEKESLTEDEATQFLK----QILDGVH 143
Query: 193 YIHTVPGVCHRDVKPQNLLV------DPLTHQVKLCDFGSAKVLVKGEANISYICSRYYR 246
Y+H+ + H D+KP+N+++ +P ++KL DFG A + G + + +
Sbjct: 144 YLHS-KRIAHFDLKPENIMLLDKNVPNP---RIKLIDFGIAHKIEAGNEFKNIFGTPEFV 199
Query: 247 APELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRC 306
APE++ D+WS G + LL G F GE + L I V
Sbjct: 200 APEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV----------- 247
Query: 307 MNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 366
NY DF + + A D RLL P R ++ H + +
Sbjct: 248 ---NY-DF----------DEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIKAI 293
Query: 367 REPNAR 372
R N R
Sbjct: 294 RRRNVR 299
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 142/323 (43%), Gaps = 48/323 (14%)
Query: 72 EPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------RELQLM 124
+P ++ RV+G G FG V + TG+ A KK+ + R K E Q++
Sbjct: 179 QPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL 238
Query: 125 RLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYT 184
++ V+SL + + +KD L L L + + + + Y P Y
Sbjct: 239 EKVNSRFVVSLAYAY---ETKDALCLVLTLMNGGDLKFHI---YHMGQAGFPEARAVFYA 292
Query: 185 YQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY 244
+I GL +H + +RD+KP+N+L+D H +++ D G A + +G+ + +
Sbjct: 293 AEICCGLEDLHR-ERIVYRDLKPENILLDDHGH-IRISDLGLAVHVPEGQTIKGRVGTVG 350
Query: 245 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 304
Y APE++ YT S D W+ GC+L E++ GQ F Q + IK REE+
Sbjct: 351 YMAPEVV-KNERYTFSPDWWALGCLLYEMIAGQSPF------QQRKKKIK------REEV 397
Query: 305 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACA 359
+ +K P + + +R P+A L S+LL P+ R +A E
Sbjct: 398 ERL-----------VKEVP--EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444
Query: 360 HPFFDELREPNARLPNGRPFPPL 382
HP F +L RL G PP
Sbjct: 445 HPLFKKLN--FKRLGAGMLEPPF 465
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 128/296 (43%), Gaps = 57/296 (19%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL-------QLMRLMDHPNVISL 135
+++G G+FG V + TG A+K + ++ E+ ++++ HP + +L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 136 KHCFFSTTSKDELFLNLVMEYV--PETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
K+ F + L VMEY E + + + +R + Y +I L Y
Sbjct: 71 KYAFQTHDR-----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAEIVSALEY 120
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPELIF 252
+H+ V +RD+K +NL++D H +K+ DFG K + A + C Y APE +
Sbjct: 121 LHS-RDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFCGTPEYLAPE-VL 177
Query: 253 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 312
+Y ++D W G V+ E++ G+ F ++ ++L E+I + EEIR
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR------- 223
Query: 313 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR-----CTALEACAHPFF 363
F + + PEA L + LL+ P R A E H FF
Sbjct: 224 ---------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 128/296 (43%), Gaps = 57/296 (19%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL-------QLMRLMDHPNVISL 135
+++G G+FG V + TG A+K + ++ E+ ++++ HP + +L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 136 KHCFFSTTSKDELFLNLVMEYV--PETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
K+ F + L VMEY E + + + +R + Y +I L Y
Sbjct: 71 KYAFQTHDR-----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAEIVSALEY 120
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPELIF 252
+H+ V +RD+K +NL++D H +K+ DFG K + A + C Y APE +
Sbjct: 121 LHS-RDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFCGTPEYLAPE-VL 177
Query: 253 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 312
+Y ++D W G V+ E++ G+ F ++ ++L E+I + EEIR
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR------- 223
Query: 313 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR-----CTALEACAHPFF 363
F + + PEA L + LL+ P R A E H FF
Sbjct: 224 ---------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 127/309 (41%), Gaps = 50/309 (16%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQD-------RRYKNRELQLMRLMDHPNVISLKH 137
+G G F F+ +T E A K V + R + E+ + R + H +V+ H
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGF-H 81
Query: 138 CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV 197
FF +D F+ +V+E R L + + + Y QI G Y+H
Sbjct: 82 GFF----EDNDFVFVVLELCRR---RSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR- 133
Query: 198 PGVCHRDVKPQNLLVDPLTHQVKLCDFGSA-KVLVKGEANISYICSRYYRAPELIFGATE 256
V HRD+K NL ++ +VK+ DFG A KV GE + Y APE +
Sbjct: 134 NRVIHRDLKLGNLFLNE-DLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPE-VLSKKG 191
Query: 257 YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRF 316
++ +D+WS GC++ LL+G+P F E C+ Y
Sbjct: 192 HSFEVDVWSIGCIMYTLLVGKPPF----------------------ETSCLKETYL---- 225
Query: 317 PQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLP-N 375
+IK + + K + P A L ++LQ P+ R T E FF P ARLP
Sbjct: 226 -RIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIP-ARLPIT 281
Query: 376 GRPFPPLFN 384
PP F+
Sbjct: 282 CLTIPPRFS 290
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 108/233 (46%), Gaps = 25/233 (10%)
Query: 71 GEPKQTISYMAER-----VVGTGSFGIVFQAKCLETGETVAIKKVLQDR--------RYK 117
G T S++++R ++G G V A+ L VA+K + D R++
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR 60
Query: 118 NRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPL 177
RE Q ++HP ++++ + T L +VMEYV R + H
Sbjct: 61 -REAQNAAALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 178 IYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI 237
I V Q L + H G+ HRDVKP N+++ T+ VK+ DFG A+ + ++
Sbjct: 119 IEVIADACQ---ALNFSHQ-NGIIHRDVKPANIMIS-ATNAVKVMDFGIARAIADSGNSV 173
Query: 238 S----YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV 286
+ I + Y +PE G + S D++S GCVL E+L G+P F G++ V
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 128/296 (43%), Gaps = 57/296 (19%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL-------QLMRLMDHPNVISL 135
+++G G+FG V + TG A+K + ++ E+ ++++ HP + +L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 136 KHCFFSTTSKDELFLNLVMEYV--PETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
K+ F + L VMEY E + + + +R + Y +I L Y
Sbjct: 71 KYAFQTHDR-----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAEIVSALEY 120
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPELIF 252
+H+ V +RD+K +NL++D H +K+ DFG K + A + C Y APE +
Sbjct: 121 LHS-RDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKXFCGTPEYLAPE-VL 177
Query: 253 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 312
+Y ++D W G V+ E++ G+ F ++ ++L E+I + EEIR
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR------- 223
Query: 313 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR-----CTALEACAHPFF 363
F + + PEA L + LL+ P R A E H FF
Sbjct: 224 ---------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 142/323 (43%), Gaps = 48/323 (14%)
Query: 72 EPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-------RELQLM 124
+P ++ RV+G G FG V + TG+ A KK+ + R K E Q++
Sbjct: 179 QPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL 238
Query: 125 RLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYT 184
++ V+SL + + +KD L L L + + + + Y P Y
Sbjct: 239 EKVNSRFVVSLAYAY---ETKDALCLVLTLMNGGDLKFHI---YHMGQAGFPEARAVFYA 292
Query: 185 YQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY 244
+I GL +H + +RD+KP+N+L+D H +++ D G A + +G+ + +
Sbjct: 293 AEICCGLEDLHR-ERIVYRDLKPENILLDDHGH-IRISDLGLAVHVPEGQTIKGRVGTVG 350
Query: 245 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI 304
Y APE++ YT S D W+ GC+L E++ GQ F Q + IK REE+
Sbjct: 351 YMAPEVV-KNERYTFSPDWWALGCLLYEMIAGQSPF------QQRKKKIK------REEV 397
Query: 305 RCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC-----TALEACA 359
+ +K P + + +R P+A L S+LL P+ R +A E
Sbjct: 398 ERL-----------VKEVP--EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444
Query: 360 HPFFDELREPNARLPNGRPFPPL 382
HP F +L RL G PP
Sbjct: 445 HPLFKKLN--FKRLGAGMLEPPF 465
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 128/296 (43%), Gaps = 57/296 (19%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL-------QLMRLMDHPNVISL 135
+++G G+FG V + TG A+K + ++ E+ ++++ HP + +L
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 73
Query: 136 KHCFFSTTSKDELFLNLVMEYV--PETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
K+ F + L VMEY E + + + +R + Y +I L Y
Sbjct: 74 KYAFQTHDR-----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAEIVSALEY 123
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPELIF 252
+H+ V +RD+K +NL++D H +K+ DFG K + A + C Y APE +
Sbjct: 124 LHS-RDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTFCGTPEYLAPE-VL 180
Query: 253 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 312
+Y ++D W G V+ E++ G+ F ++ ++L E+I + EEIR
Sbjct: 181 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR------- 226
Query: 313 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR-----CTALEACAHPFF 363
F + + PEA L + LL+ P R A E H FF
Sbjct: 227 ---------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 267
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 128/296 (43%), Gaps = 57/296 (19%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL-------QLMRLMDHPNVISL 135
+++G G+FG V + TG A+K + ++ E+ ++++ HP + +L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 136 KHCFFSTTSKDELFLNLVMEYV--PETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
K+ F + L VMEY E + + + +R + Y +I L Y
Sbjct: 71 KYAFQTHDR-----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAEIVSALEY 120
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPELIF 252
+H+ V +RD+K +NL++D H +K+ DFG K + A + C Y APE +
Sbjct: 121 LHS-RDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTFCGTPEYLAPE-VL 177
Query: 253 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 312
+Y ++D W G V+ E++ G+ F ++ ++L E+I + EEIR
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR------- 223
Query: 313 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR-----CTALEACAHPFF 363
F + + PEA L + LL+ P R A E H FF
Sbjct: 224 ---------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 108/233 (46%), Gaps = 25/233 (10%)
Query: 71 GEPKQTISYMAER-----VVGTGSFGIVFQAKCLETGETVAIKKVLQDR--------RYK 117
G T S++++R ++G G V A+ L VA+K + D R++
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR 60
Query: 118 NRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPL 177
RE Q ++HP ++++ + T L +VMEYV R + H
Sbjct: 61 -REAQNAAALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 178 IYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI 237
I V Q L + H G+ HRDVKP N+++ T+ VK+ DFG A+ + ++
Sbjct: 119 IEVIADACQ---ALNFSHQ-NGIIHRDVKPANIMIS-ATNAVKVMDFGIARAIADSGNSV 173
Query: 238 S----YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV 286
+ I + Y +PE G + S D++S GCVL E+L G+P F G++ V
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 104/209 (49%), Gaps = 30/209 (14%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR------ELQLMRLMDHPNVISLKHC 138
+G GSFG V +A+ G VA+K +++ + R E+ +M+ + HPN++
Sbjct: 45 IGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV----- 97
Query: 139 FFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV 197
F L++V EY+ ++YR+L H S +++ Y + +G+ Y+H
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLL-HKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 198 -PGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY------YRAPEL 250
P + HRD+K NLLVD + VK+CDFG +++ ++ S+ + APE+
Sbjct: 157 NPPIVHRDLKSPNLLVDK-KYTVKVCDFGLSRLKAS-----XFLXSKXAAGTPEWMAPEV 210
Query: 251 IFGATEYTTSIDIWSAGCVLAEL-LLGQP 278
+ S D++S G +L EL L QP
Sbjct: 211 LRDEPSNEKS-DVYSFGVILWELATLQQP 238
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 128/296 (43%), Gaps = 57/296 (19%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL-------QLMRLMDHPNVISL 135
+++G G+FG V + TG A+K + ++ E+ ++++ HP + +L
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 136 KHCFFSTTSKDELFLNLVMEYV--PETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
K+ F + L VMEY E + + + +R + Y +I L Y
Sbjct: 71 KYAFQTHDR-----LCFVMEYANGGELFFHLSRERVFTEER-----ARFYGAEIVSALEY 120
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-YYRAPELIF 252
+H+ V +RD+K +NL++D H +K+ DFG K + A + C Y APE +
Sbjct: 121 LHS-RDVVYRDIKLENLMLDKDGH-IKITDFGLCKEGISDGATMKTFCGTPEYLAPE-VL 177
Query: 253 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 312
+Y ++D W G V+ E++ G+ F ++ ++L E+I + EEIR
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELILM------EEIR------- 223
Query: 313 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR-----CTALEACAHPFF 363
F + + PEA L + LL+ P R A E H FF
Sbjct: 224 ---------------FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 20/204 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR------ELQLMRLMDHPNVISLKHC 138
+G GSFG V +A+ G VA+K +++ + R E+ +M+ + HPN++
Sbjct: 45 IGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV----- 97
Query: 139 FFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV 197
F L++V EY+ ++YR+L H S +++ Y + +G+ Y+H
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLL-HKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 198 -PGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG-EANISYICSRYYRAPELIFGAT 255
P + HR++K NLLVD + VK+CDFG +++ ++ S + + APE++
Sbjct: 157 NPPIVHRNLKSPNLLVDK-KYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEP 215
Query: 256 EYTTSIDIWSAGCVLAEL-LLGQP 278
S D++S G +L EL L QP
Sbjct: 216 SNEKS-DVYSFGVILWELATLQQP 238
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 105/224 (46%), Gaps = 27/224 (12%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRE-----------LQLMRL 126
+ R++G G FG V+ + +TG+ A+K L +R K ++ L L+
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMK-CLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 127 MDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKH--YSSMNQRMPLIYVKLYT 184
D P ++ + + F + D+L L + + Y + +H +S + R Y
Sbjct: 249 GDCPFIVCMSYAFHTP---DKLSFILDLMNGGDLHYHLSQHGVFSEADMR-------FYA 298
Query: 185 YQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY 244
+I GL ++H V +RD+KP N+L+D H V++ D G A K + + S + +
Sbjct: 299 AEIILGLEHMHN-RFVVYRDLKPANILLDEHGH-VRISDLGLACDFSKKKPHAS-VGTHG 355
Query: 245 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQ 288
Y APE++ Y +S D +S GC+L +LL G F D+
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 105/224 (46%), Gaps = 27/224 (12%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRE-----------LQLMRL 126
+ R++G G FG V+ + +TG+ A+K L +R K ++ L L+
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMK-CLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 127 MDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKH--YSSMNQRMPLIYVKLYT 184
D P ++ + + F + D+L L + + Y + +H +S + R Y
Sbjct: 248 GDCPFIVCMSYAFHTP---DKLSFILDLMNGGDLHYHLSQHGVFSEADMR-------FYA 297
Query: 185 YQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY 244
+I GL ++H V +RD+KP N+L+D H V++ D G A K + + S + +
Sbjct: 298 AEIILGLEHMHN-RFVVYRDLKPANILLDEHGH-VRISDLGLACDFSKKKPHAS-VGTHG 354
Query: 245 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQ 288
Y APE++ Y +S D +S GC+L +LL G F D+
Sbjct: 355 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 398
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 107/231 (46%), Gaps = 25/231 (10%)
Query: 71 GEPKQTISYMAER-----VVGTGSFGIVFQAKCLETGETVAIKKVLQDR--------RYK 117
G T S++++R ++G G V A+ L VA+K + D R++
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR 60
Query: 118 NRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPL 177
RE Q ++HP ++++ + T L +VMEYV R + H
Sbjct: 61 -REAQNAAALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 178 IYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI 237
I V Q L + H G+ HRDVKP N+++ T+ VK+ DFG A+ + ++
Sbjct: 119 IEVIADACQ---ALNFSHQ-NGIIHRDVKPANIMIS-ATNAVKVMDFGIARAIADSGNSV 173
Query: 238 S----YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGEN 284
+ I + Y +PE G + S D++S GCVL E+L G+P F G++
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 108/233 (46%), Gaps = 25/233 (10%)
Query: 71 GEPKQTISYMAER-----VVGTGSFGIVFQAKCLETGETVAIKKVLQDR--------RYK 117
G T S++++R ++G G V A+ L VA+K + D R++
Sbjct: 1 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR 60
Query: 118 NRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPL 177
RE Q ++HP ++++ + T L +VMEYV R + H
Sbjct: 61 -REAQNAAALNHPAIVAVYATGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRA 118
Query: 178 IYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI 237
I V Q L + H G+ HRDVKP N+++ T+ VK+ DFG A+ + ++
Sbjct: 119 IEVIADACQ---ALNFSHQ-NGIIHRDVKPANIMIS-ATNAVKVMDFGIARAIADSGNSV 173
Query: 238 S----YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV 286
+ I + Y +PE G + S D++S GCVL E+L G+P F G++ V
Sbjct: 174 TQTAAVIGTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 105/224 (46%), Gaps = 27/224 (12%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRE-----------LQLMRL 126
+ R++G G FG V+ + +TG+ A+K L +R K ++ L L+
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMK-CLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 127 MDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKH--YSSMNQRMPLIYVKLYT 184
D P ++ + + F + D+L L + + Y + +H +S + R Y
Sbjct: 249 GDCPFIVCMSYAFHTP---DKLSFILDLMNGGDLHYHLSQHGVFSEADMR-------FYA 298
Query: 185 YQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY 244
+I GL ++H V +RD+KP N+L+D H V++ D G A K + + S + +
Sbjct: 299 AEIILGLEHMHN-RFVVYRDLKPANILLDEHGH-VRISDLGLACDFSKKKPHAS-VGTHG 355
Query: 245 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQ 288
Y APE++ Y +S D +S GC+L +LL G F D+
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 105/224 (46%), Gaps = 27/224 (12%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRE-----------LQLMRL 126
+ R++G G FG V+ + +TG+ A+K L +R K ++ L L+
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMK-CLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 127 MDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKH--YSSMNQRMPLIYVKLYT 184
D P ++ + + F + D+L L + + Y + +H +S + R Y
Sbjct: 249 GDCPFIVCMSYAFHTP---DKLSFILDLMNGGDLHYHLSQHGVFSEADMR-------FYA 298
Query: 185 YQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY 244
+I GL ++H V +RD+KP N+L+D H V++ D G A K + + S + +
Sbjct: 299 AEIILGLEHMHN-RFVVYRDLKPANILLDEHGH-VRISDLGLACDFSKKKPHAS-VGTHG 355
Query: 245 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQ 288
Y APE++ Y +S D +S GC+L +LL G F D+
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 399
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 108/233 (46%), Gaps = 25/233 (10%)
Query: 71 GEPKQTISYMAER-----VVGTGSFGIVFQAKCLETGETVAIKKVLQDR--------RYK 117
G T S++++R ++G G V A+ L VA+K + D R++
Sbjct: 18 GSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR 77
Query: 118 NRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPL 177
RE Q ++HP ++++ + T L +VMEYV R + H
Sbjct: 78 -REAQNAAALNHPAIVAVYDTGEAETPAGPLPY-IVMEYVDGVTLRDIVHTEGPMTPKRA 135
Query: 178 IYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI 237
I V Q L + H G+ HRDVKP N+++ T+ VK+ DFG A+ + ++
Sbjct: 136 IEVIADACQ---ALNFSHQ-NGIIHRDVKPANIMIS-ATNAVKVMDFGIARAIADSGNSV 190
Query: 238 S----YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAV 286
+ I + Y +PE G + S D++S GCVL E+L G+P F G++ V
Sbjct: 191 TQTAAVIGTAQYLSPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPV 242
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 25/272 (9%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ----- 122
GK EP ++ Y ++G+G FG V+ + VAIK V +DR EL
Sbjct: 29 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 123 -----LMRLMDH--PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
L++ + VI L F D L L + ++ + ++ + +
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWF---ERPDSFVLILERPEPVQDLFDFITERGALQEEL 144
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
+ + +Q+ + + H GV HRD+K +N+L+D ++KL DFGS L+K
Sbjct: 145 ----ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTV 198
Query: 236 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIK 294
+ +R Y PE I + S +WS G +L +++ G P E + V +
Sbjct: 199 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ 258
Query: 295 VLGTPTREEIR-CMNPNYTDF-RFPQIKAHPW 324
+ + + IR C+ +D F +I+ HPW
Sbjct: 259 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPW 290
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 124/293 (42%), Gaps = 52/293 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIK--KVLQDRRYK--------NRELQLMRLMDHPNVIS 134
+G+G F IV + + TG A K K Q R + RE+ ++R + HPN+I+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 135 LKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L + + T + L++E V ++ L S+++ ++K QI G+ Y
Sbjct: 80 LHDVYENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIK----QILDGVNY 130
Query: 194 IHTVPGVCHRDVKPQN-LLVD---PLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
+HT + H D+KP+N +L+D P+ H +KL DFG A + G + + + APE
Sbjct: 131 LHT-KKIAHFDLKPENIMLLDKNIPIPH-IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE 188
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
++ D+WS G + LL G F G+ + L I V
Sbjct: 189 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV-------------- 233
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
++ + + F + A D +LL R T EA HP+
Sbjct: 234 -----------SYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 25/272 (9%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ----- 122
GK EP ++ Y ++G+G FG V+ + VAIK V +DR EL
Sbjct: 28 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 123 -----LMRLMDH--PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
L++ + VI L F D L L + ++ + ++ + +
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWF---ERPDSFVLILERPEPVQDLFDFITERGALQEEL 143
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
+ + +Q+ + + H GV HRD+K +N+L+D ++KL DFGS L+K
Sbjct: 144 ----ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTV 197
Query: 236 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIK 294
+ +R Y PE I + S +WS G +L +++ G P E + V +
Sbjct: 198 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ 257
Query: 295 VLGTPTREEIR-CMNPNYTDF-RFPQIKAHPW 324
+ + + IR C+ +D F +I+ HPW
Sbjct: 258 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPW 289
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 25/272 (9%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ----- 122
GK EP ++ Y ++G+G FG V+ + VAIK V +DR EL
Sbjct: 29 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 123 -----LMRLMDH--PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
L++ + VI L F D L L + ++ + ++ + +
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWF---ERPDSFVLILERPEPVQDLFDFITERGALQEEL 144
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
+ + +Q+ + + H GV HRD+K +N+L+D ++KL DFGS L+K
Sbjct: 145 ----ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTV 198
Query: 236 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIK 294
+ +R Y PE I + S +WS G +L +++ G P E + V +
Sbjct: 199 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ 258
Query: 295 VLGTPTREEIR-CMNPNYTDF-RFPQIKAHPW 324
+ + + IR C+ +D F +I+ HPW
Sbjct: 259 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPW 290
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 25/272 (9%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ----- 122
GK EP ++ Y ++G+G FG V+ + VAIK V +DR EL
Sbjct: 28 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 123 -----LMRLMDH--PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
L++ + VI L F D L L + ++ + ++ + +
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWF---ERPDSFVLILERPEPVQDLFDFITERGALQEEL 143
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
+ + +Q+ + + H GV HRD+K +N+L+D ++KL DFGS L+K
Sbjct: 144 ----ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTV 197
Query: 236 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIK 294
+ +R Y PE I + S +WS G +L +++ G P E + V +
Sbjct: 198 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ 257
Query: 295 VLGTPTREEIR-CMNPNYTDF-RFPQIKAHPW 324
+ + + IR C+ +D F +I+ HPW
Sbjct: 258 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPW 289
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 25/272 (9%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ----- 122
GK EP ++ Y ++G+G FG V+ + VAIK V +DR EL
Sbjct: 35 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 93
Query: 123 -----LMRLMDH--PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
L++ + VI L F D L L + ++ + ++ + +
Sbjct: 94 PMEVVLLKKVSSGFSGVIRLLDWF---ERPDSFVLILERPEPVQDLFDFITERGALQEEL 150
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
+ + +Q+ + + H GV HRD+K +N+L+D ++KL DFGS L+K
Sbjct: 151 ----ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTV 204
Query: 236 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIK 294
+ +R Y PE I + S +WS G +L +++ G P E + V +
Sbjct: 205 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ 264
Query: 295 VLGTPTREEIR-CMNPNYTDF-RFPQIKAHPW 324
+ + + IR C+ +D F +I+ HPW
Sbjct: 265 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPW 296
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 101/211 (47%), Gaps = 35/211 (16%)
Query: 83 RVVGTGSFGIVFQAKCLE-----TGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNV 132
R +G G FG V C + TGE VA+K + D R +E+ ++R + H ++
Sbjct: 20 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVPETMYR--VLKHYSSMNQRMPLIYVKLYTYQIFRG 190
I K C + E L LVMEYVP R + +H + Q + L+ QI G
Sbjct: 79 IKYKGC---CEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLL------LFAQQICEG 129
Query: 191 LAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR------- 243
+AY+H+ + HR++ +N+L+D VK+ DFG AK + +G Y R
Sbjct: 130 MAYLHSQHYI-HRNLAARNVLLDN-DRLVKIGDFGLAKAVPEGH---EYYRVREDGDSPV 184
Query: 244 YYRAPELIFGATEYTTSIDIWSAGCVLAELL 274
++ APE + Y S D+WS G L ELL
Sbjct: 185 FWYAPECLKEYKFYYAS-DVWSFGVTLYELL 214
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 25/272 (9%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ----- 122
GK EP ++ Y ++G+G FG V+ + VAIK V +DR EL
Sbjct: 16 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 74
Query: 123 -----LMRLMDH--PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
L++ + VI L F D L L + ++ + ++ + +
Sbjct: 75 PMEVVLLKKVSSGFSGVIRLLDWF---ERPDSFVLILERPEPVQDLFDFITERGALQEEL 131
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
+ + +Q+ + + H GV HRD+K +N+L+D ++KL DFGS L+K
Sbjct: 132 ----ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTV 185
Query: 236 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIK 294
+ +R Y PE I + S +WS G +L +++ G P E + V +
Sbjct: 186 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ 245
Query: 295 VLGTPTREEIR-CMNPNYTDF-RFPQIKAHPW 324
+ + + IR C+ +D F +I+ HPW
Sbjct: 246 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPW 277
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 25/272 (9%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ----- 122
GK EP ++ Y ++G+G FG V+ + VAIK V +DR EL
Sbjct: 15 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 73
Query: 123 -----LMRLMDH--PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
L++ + VI L F D L L + ++ + ++ + +
Sbjct: 74 PMEVVLLKKVSSGFSGVIRLLDWF---ERPDSFVLILERPEPVQDLFDFITERGALQEEL 130
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
+ + +Q+ + + H GV HRD+K +N+L+D ++KL DFGS L+K
Sbjct: 131 ----ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTV 184
Query: 236 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIK 294
+ +R Y PE I + S +WS G +L +++ G P E + V +
Sbjct: 185 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ 244
Query: 295 VLGTPTREEIR-CMNPNYTDF-RFPQIKAHPW 324
+ + + IR C+ +D F +I+ HPW
Sbjct: 245 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPW 276
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 100/211 (47%), Gaps = 35/211 (16%)
Query: 83 RVVGTGSFGIVFQAKCLE-----TGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNV 132
R +G G FG V C + TGE VA+K + D R +E+ ++R + H ++
Sbjct: 37 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHI 95
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVPETMYR--VLKHYSSMNQRMPLIYVKLYTYQIFRG 190
I K C + L LVMEYVP R + +H + Q + L+ QI G
Sbjct: 96 IKYKGCCEDAGAAS---LQLVMEYVPLGSLRDYLPRHSIGLAQLL------LFAQQICEG 146
Query: 191 LAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG-------EANISYICSR 243
+AY+H + HRD+ +N+L+D VK+ DFG AK + +G E S +
Sbjct: 147 MAYLHAQHYI-HRDLAARNVLLDN-DRLVKIGDFGLAKAVPEGHEXYRVREDGDSPV--- 201
Query: 244 YYRAPELIFGATEYTTSIDIWSAGCVLAELL 274
++ APE + Y S D+WS G L ELL
Sbjct: 202 FWYAPECLKEYKFYYAS-DVWSFGVTLYELL 231
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 25/272 (9%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ----- 122
GK EP ++ Y ++G+G FG V+ + VAIK V +DR EL
Sbjct: 43 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 101
Query: 123 -----LMRLMDH--PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
L++ + VI L F D L L + ++ + ++ + +
Sbjct: 102 PMEVVLLKKVSSGFSGVIRLLDWF---ERPDSFVLILERPEPVQDLFDFITERGALQEEL 158
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
+ + +Q+ + + H GV HRD+K +N+L+D ++KL DFGS L+K
Sbjct: 159 ----ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTV 212
Query: 236 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIK 294
+ +R Y PE I + S +WS G +L +++ G P E + V +
Sbjct: 213 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ 272
Query: 295 VLGTPTREEIR-CMNPNYTDF-RFPQIKAHPW 324
+ + + IR C+ +D F +I+ HPW
Sbjct: 273 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPW 304
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 25/272 (9%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ----- 122
GK EP ++ Y ++G+G FG V+ + VAIK V +DR EL
Sbjct: 28 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 123 -----LMRLMDH--PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
L++ + VI L F D L L + ++ + ++ + +
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWF---ERPDSFVLILERPEPVQDLFDFITERGALQEEL 143
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
+ + +Q+ + + H GV HRD+K +N+L+D ++KL DFGS L+K
Sbjct: 144 ----ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTV 197
Query: 236 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIK 294
+ +R Y PE I + S +WS G +L +++ G P E + V +
Sbjct: 198 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ 257
Query: 295 VLGTPTREEIR-CMNPNYTDF-RFPQIKAHPW 324
+ + + IR C+ +D F +I+ HPW
Sbjct: 258 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPW 289
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 140/306 (45%), Gaps = 51/306 (16%)
Query: 77 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQD-RRYKNRELQLMRLMD-HPNVIS 134
IS+ + V+G G+ G + + + VA+K++L + + +RE+QL+R D HPNVI
Sbjct: 24 ISFCPKDVLGHGAEGTIVYRGMFDNRD-VAVKRILPECFSFADREVQLLRESDEHPNVIR 82
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETM--YRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
+ T KD F + +E T+ Y K ++ + P+ ++ Q GLA
Sbjct: 83 -----YFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLE-PITLLQ----QTTSGLA 132
Query: 193 YIHTVPGVCHRDVKPQNLLVD-PLTH---QVKLCDFGSAKVLVKGEANISYIC----SRY 244
++H++ + HRD+KP N+L+ P H + + DFG K L G + S +
Sbjct: 133 HLHSL-NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEG 191
Query: 245 YRAPELIFGATEY--TTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 302
+ APE++ + T ++DI+SAGCV ++ + P ++ + I+ LG +
Sbjct: 192 WIAPEMLSEDCKENPTYTVDIFSAGCVFY-YVISEGSHPFGKSLQRQANIL--LGACS-- 246
Query: 303 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
+ C++P K A +L +++ P R +A HPF
Sbjct: 247 -LDCLHPE-------------------KHEDVIARELIEKMIAMDPQKRPSAKHVLKHPF 286
Query: 363 FDELRE 368
F L +
Sbjct: 287 FWSLEK 292
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 124/293 (42%), Gaps = 52/293 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F +V + + TG A K ++ RR K+ RE+ +++ + HPNVI
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
+L + + T + L++E V ++ L S+ + ++K QI G+
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 193 YIHTVPGVCHRDVKPQNLLV---DPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
Y+H++ + H D+KP+N+++ + ++K+ DFG A + G + + + APE
Sbjct: 129 YLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
++ D+WS G + LL G F G+ + L + +N
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA------------NVSAVNY 234
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
+ D F A A D RLL P R T ++ HP+
Sbjct: 235 EFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 100/211 (47%), Gaps = 35/211 (16%)
Query: 83 RVVGTGSFGIVFQAKCLE-----TGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNV 132
R +G G FG V C + TGE VA+K + D R +E+ ++R + H ++
Sbjct: 20 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHI 78
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVPETMYR--VLKHYSSMNQRMPLIYVKLYTYQIFRG 190
I K C + E L LVMEYVP R + +H + Q + L+ QI G
Sbjct: 79 IKYKGC---CEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLL------LFAQQICEG 129
Query: 191 LAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR------- 243
+AY+H + HR++ +N+L+D VK+ DFG AK + +G Y R
Sbjct: 130 MAYLHAQHYI-HRNLAARNVLLDN-DRLVKIGDFGLAKAVPEGH---EYYRVREDGDSPV 184
Query: 244 YYRAPELIFGATEYTTSIDIWSAGCVLAELL 274
++ APE + Y S D+WS G L ELL
Sbjct: 185 FWYAPECLKEYKFYYAS-DVWSFGVTLYELL 214
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 117/272 (43%), Gaps = 25/272 (9%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ----- 122
GK EP ++ Y ++G+G FG V+ + VAIK V +DR EL
Sbjct: 29 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 123 -----LMRLMDH--PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
L++ + VI L F D L L + ++ + ++ + +
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWF---ERPDSFVLILERPEPVQDLFDFITERGALQEEL 144
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
+ + +Q+ + + H GV HRD+K +N+L+D ++KL DFGS L+K
Sbjct: 145 ----ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTV 198
Query: 236 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIK 294
+ +R Y PE I + S +WS G +L +++ G P E + V +
Sbjct: 199 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ 258
Query: 295 VLGTPTREEIR-CMNPNYTDF-RFPQIKAHPW 324
+ + IR C+ +D F +I+ HPW
Sbjct: 259 RVSXECQHLIRWCLALRPSDRPTFEEIQNHPW 290
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 124/293 (42%), Gaps = 52/293 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F +V + + TG A K ++ RR K+ RE+ +++ + HPNVI
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
+L + + T + L++E V ++ L S+ + ++K QI G+
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 193 YIHTVPGVCHRDVKPQNLLV---DPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
Y+H++ + H D+KP+N+++ + ++K+ DFG A + G + + + APE
Sbjct: 129 YLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
++ D+WS G + LL G F G+ + L + +N
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA------------NVSAVNY 234
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
+ D F A A D RLL P R T ++ HP+
Sbjct: 235 EFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 124/293 (42%), Gaps = 52/293 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F +V + + TG A K ++ RR K+ RE+ +++ + HPNVI
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
+L + + T + L++E V ++ L S+ + ++K QI G+
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 193 YIHTVPGVCHRDVKPQNLLV---DPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
Y+H++ + H D+KP+N+++ + ++K+ DFG A + G + + + APE
Sbjct: 129 YLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
++ D+WS G + LL G F G+ + L + +N
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA------------NVSAVNY 234
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
+ D F A A D RLL P R T ++ HP+
Sbjct: 235 EFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 124/293 (42%), Gaps = 52/293 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F +V + + TG A K ++ RR K+ RE+ +++ + HPNVI
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
+L + + T + L++E V ++ L S+ + ++K QI G+
Sbjct: 77 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 127
Query: 193 YIHTVPGVCHRDVKPQNLLV---DPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
Y+H++ + H D+KP+N+++ + ++K+ DFG A + G + + + APE
Sbjct: 128 YLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 186
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
++ D+WS G + LL G F G+ + L + +N
Sbjct: 187 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA------------NVSAVNY 233
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
+ D F A A D RLL P R T ++ HP+
Sbjct: 234 EFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 273
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 124/293 (42%), Gaps = 52/293 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F +V + + TG A K ++ RR K+ RE+ +++ + HPNVI
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
+L + + T + L++E V ++ L S+ + ++K QI G+
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 193 YIHTVPGVCHRDVKPQNLLV---DPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
Y+H++ + H D+KP+N+++ + ++K+ DFG A + G + + + APE
Sbjct: 129 YLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
++ D+WS G + LL G F G+ + L + +N
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA------------NVSAVNY 234
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
+ D F A A D RLL P R T ++ HP+
Sbjct: 235 EFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 117/272 (43%), Gaps = 25/272 (9%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ----- 122
GK EP ++ Y ++G+G FG V+ + VAIK V +DR EL
Sbjct: 29 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 123 -----LMRLMDH--PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
L++ + VI L F D L L + ++ + ++ + +
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWF---ERPDSFVLILERPEPVQDLFDFITERGALQEEL 144
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
+ + +Q+ + + H GV HRD+K +N+L+D ++KL DFGS L+K
Sbjct: 145 ----ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTV 198
Query: 236 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIK 294
+ +R Y PE I + S +WS G +L +++ G P E + V +
Sbjct: 199 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ 258
Query: 295 VLGTPTREEIR-CMNPNYTDF-RFPQIKAHPW 324
+ + IR C+ +D F +I+ HPW
Sbjct: 259 RVSXECQHLIRWCLALRPSDRPTFEEIQNHPW 290
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 124/293 (42%), Gaps = 52/293 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F +V + + TG A K ++ RR K+ RE+ +++ + HPNVI
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
+L + + T + L++E V ++ L S+ + ++K QI G+
Sbjct: 77 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 127
Query: 193 YIHTVPGVCHRDVKPQNLLV---DPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
Y+H++ + H D+KP+N+++ + ++K+ DFG A + G + + + APE
Sbjct: 128 YLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 186
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
++ D+WS G + LL G F G+ + L + +N
Sbjct: 187 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA------------NVSAVNY 233
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
+ D F A A D RLL P R T ++ HP+
Sbjct: 234 EFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 273
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 124/293 (42%), Gaps = 52/293 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F +V + + TG A K ++ RR K+ RE+ +++ + HPNVI
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
+L + + T + L++E V ++ L S+ + ++K QI G+
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 193 YIHTVPGVCHRDVKPQNLLV---DPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
Y+H++ + H D+KP+N+++ + ++K+ DFG A + G + + + APE
Sbjct: 129 YLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
++ D+WS G + LL G F G+ + L + +N
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA------------NVSAVNY 234
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
+ D F A A D RLL P R T ++ HP+
Sbjct: 235 EFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 117/272 (43%), Gaps = 25/272 (9%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ----- 122
GK EP ++ Y ++G+G FG V+ + VAIK V +DR EL
Sbjct: 15 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 73
Query: 123 -----LMRLMDH--PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
L++ + VI L F D L L + ++ + ++ + +
Sbjct: 74 PMEVVLLKKVSSGFSGVIRLLDWF---ERPDSFVLILERPEPVQDLFDFITERGALQEEL 130
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
+ + +Q+ + + H GV HRD+K +N+L+D ++KL DFGS L+K
Sbjct: 131 ----ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTV 184
Query: 236 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIK 294
+ +R Y PE I + S +WS G +L +++ G P E + V +
Sbjct: 185 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ 244
Query: 295 VLGTPTREEIR-CMNPNYTDF-RFPQIKAHPW 324
+ + IR C+ +D F +I+ HPW
Sbjct: 245 RVSXECQHLIRWCLALRPSDRPTFEEIQNHPW 276
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 117/272 (43%), Gaps = 25/272 (9%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ----- 122
GK EP ++ Y ++G+G FG V+ + VAIK V +DR EL
Sbjct: 16 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 74
Query: 123 -----LMRLMDH--PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
L++ + VI L F D L L + ++ + ++ + +
Sbjct: 75 PMEVVLLKKVSSGFSGVIRLLDWF---ERPDSFVLILERPEPVQDLFDFITERGALQEEL 131
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
+ + +Q+ + + H GV HRD+K +N+L+D ++KL DFGS L+K
Sbjct: 132 ----ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTV 185
Query: 236 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIK 294
+ +R Y PE I + S +WS G +L +++ G P E + V +
Sbjct: 186 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ 245
Query: 295 VLGTPTREEIR-CMNPNYTDF-RFPQIKAHPW 324
+ + IR C+ +D F +I+ HPW
Sbjct: 246 RVSXECQHLIRWCLALRPSDRPTFEEIQNHPW 277
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 117/272 (43%), Gaps = 25/272 (9%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ----- 122
GK EP ++ Y ++G+G FG V+ + VAIK V +DR EL
Sbjct: 28 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 123 -----LMRLMDH--PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
L++ + VI L F D L L + ++ + ++ + +
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWF---ERPDSFVLILERPEPVQDLFDFITERGALQEEL 143
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
+ + +Q+ + + H GV HRD+K +N+L+D ++KL DFGS L+K
Sbjct: 144 ----ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTV 197
Query: 236 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIK 294
+ +R Y PE I + S +WS G +L +++ G P E + V +
Sbjct: 198 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQ 257
Query: 295 VLGTPTREEIR-CMNPNYTDF-RFPQIKAHPW 324
+ + IR C+ +D F +I+ HPW
Sbjct: 258 RVSXECQHLIRWCLALRPSDRPTFEEIQNHPW 289
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 124/293 (42%), Gaps = 52/293 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F +V + + TG A K ++ RR K+ RE+ +++ + HPNVI
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
+L + + T + L++E V ++ L S+ + ++K QI G+
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 193 YIHTVPGVCHRDVKPQNLLV---DPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
Y+H++ + H D+KP+N+++ + ++K+ DFG A + G + + + APE
Sbjct: 129 YLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
++ D+WS G + LL G F G+ + L + +N
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA------------NVSAVNY 234
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
+ D F A A D RLL P R T ++ HP+
Sbjct: 235 EFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 117/272 (43%), Gaps = 25/272 (9%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ----- 122
GK EP ++ Y ++G+G FG V+ + VAIK V +DR EL
Sbjct: 48 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 106
Query: 123 -----LMRLMDH--PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
L++ + VI L F D L L + ++ + ++ + +
Sbjct: 107 PMEVVLLKKVSSGFSGVIRLLDWF---ERPDSFVLILERPEPVQDLFDFITERGALQEEL 163
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
+ + +Q+ + + H GV HRD+K +N+L+D ++KL DFGS L+K
Sbjct: 164 ----ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTV 217
Query: 236 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIK 294
+ +R Y PE I + S +WS G +L +++ G P E + V +
Sbjct: 218 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ 277
Query: 295 VLGTPTREEIR-CMNPNYTDF-RFPQIKAHPW 324
+ + IR C+ +D F +I+ HPW
Sbjct: 278 RVSXECQHLIRWCLALRPSDRPTFEEIQNHPW 309
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 117/272 (43%), Gaps = 25/272 (9%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ----- 122
GK EP ++ Y ++G+G FG V+ + VAIK V +DR EL
Sbjct: 43 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 101
Query: 123 -----LMRLMDH--PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
L++ + VI L F D L L + ++ + ++ + +
Sbjct: 102 PMEVVLLKKVSSGFSGVIRLLDWF---ERPDSFVLILERPEPVQDLFDFITERGALQEEL 158
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
+ + +Q+ + + H GV HRD+K +N+L+D ++KL DFGS L+K
Sbjct: 159 ----ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTV 212
Query: 236 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIK 294
+ +R Y PE I + S +WS G +L +++ G P E + V +
Sbjct: 213 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ 272
Query: 295 VLGTPTREEIR-CMNPNYTDF-RFPQIKAHPW 324
+ + IR C+ +D F +I+ HPW
Sbjct: 273 RVSXECQHLIRWCLALRPSDRPTFEEIQNHPW 304
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 124/293 (42%), Gaps = 52/293 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F +V + + TG A K ++ RR K+ RE+ +++ + HPNVI
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
+L + + T + L++E V ++ L S+ + ++K QI G+
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 193 YIHTVPGVCHRDVKPQNLLV---DPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
Y+H++ + H D+KP+N+++ + ++K+ DFG A + G + + + APE
Sbjct: 129 YLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
++ D+WS G + LL G F G+ + L + +N
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA------------NVSAVNY 234
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
+ D F A A D RLL P R T ++ HP+
Sbjct: 235 EFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 124/293 (42%), Gaps = 52/293 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F +V + + TG A K ++ RR K+ RE+ +++ + HPNVI
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
+L + + T + L++E V ++ L S+ + ++K QI G+
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 193 YIHTVPGVCHRDVKPQNLLV---DPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
Y+H++ + H D+KP+N+++ + ++K+ DFG A + G + + + APE
Sbjct: 129 YLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
++ D+WS G + LL G F G+ + L + +N
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA------------NVSAVNY 234
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
+ D F A A D RLL P R T ++ HP+
Sbjct: 235 EFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 83 RVVGTGSFGIV----FQAKCLETGETVAIKKVLQDRRYKN-----RELQLMRLMDHPNVI 133
R +G G FG V + + TGE VA+K + + + +E++++R + H N++
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKL-YTYQIFRGLA 192
K T + L+ME++P LK Y N+ + +L Y QI +G+
Sbjct: 87 KYKGI---CTEDGGNGIKLIMEFLPSGS---LKEYLPKNKNKINLKQQLKYAVQICKGMD 140
Query: 193 YIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR----YYRAP 248
Y+ + V HRD+ +N+LV+ HQVK+ DFG K + + + R ++ AP
Sbjct: 141 YLGSRQYV-HRDLAARNVLVES-EHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAP 198
Query: 249 ELIFGATEYTTSIDIWSAGCVLAELL 274
E + + Y S D+WS G L ELL
Sbjct: 199 ECLMQSKFYIAS-DVWSFGVTLHELL 223
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 124/293 (42%), Gaps = 52/293 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F +V + + TG A K ++ RR K+ RE+ +++ + HPNVI
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
+L + + T + L++E V ++ L S+ + ++K QI G+
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 193 YIHTVPGVCHRDVKPQNLLV---DPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
Y+H++ + H D+KP+N+++ + ++K+ DFG A + G + + + APE
Sbjct: 129 YLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
++ D+WS G + LL G F G+ + L + +N
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA------------NVSAVNY 234
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
+ D F A A D RLL P R T ++ HP+
Sbjct: 235 EFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 111/246 (45%), Gaps = 33/246 (13%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRE-----LQLMRLMDHPNVISLKHCF 139
+G G+FG V++A+ ET +A KV+ + + E + ++ DHPN++ L F
Sbjct: 45 LGDGAFGKVYKAQNKETS-VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLI--YVKLYTYQIFRGLAYIHTV 197
+ + L +++E+ + + PL +++ Q L Y+H
Sbjct: 104 YYENN-----LWILIEFCAGGAVDAV----MLELERPLTESQIQVVCKQTLDALNYLHD- 153
Query: 198 PGVCHRDVKPQNLLVDPLTHQVKLCDFG-SAKVLVKGEANISYICSRYYRAPELIFGATE 256
+ HRD+K N+L L +KL DFG SAK + S+I + Y+ APE++ T
Sbjct: 154 NKIIHRDLKAGNILF-TLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 257 ----YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIK----VLGTPTREEIRCMN 308
Y D+WS G L E+ +P N + L++I K L P+R +
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSR-----WS 267
Query: 309 PNYTDF 314
N+ DF
Sbjct: 268 SNFKDF 273
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 100/206 (48%), Gaps = 23/206 (11%)
Query: 83 RVVGTGSFGIV----FQAKCLETGETVAIKKVLQDRRYKN-----RELQLMRLMDHPNVI 133
R +G G FG V + + TGE VA+K + + + +E++++R + H N++
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 74
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKL-YTYQIFRGLA 192
K T + L+ME++P LK Y N+ + +L Y QI +G+
Sbjct: 75 KYKGI---CTEDGGNGIKLIMEFLPSGS---LKEYLPKNKNKINLKQQLKYAVQICKGMD 128
Query: 193 YIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR----YYRAP 248
Y+ + V HRD+ +N+LV+ HQVK+ DFG K + + + R ++ AP
Sbjct: 129 YLGSRQYV-HRDLAARNVLVES-EHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAP 186
Query: 249 ELIFGATEYTTSIDIWSAGCVLAELL 274
E + + Y S D+WS G L ELL
Sbjct: 187 ECLMQSKFYIAS-DVWSFGVTLHELL 211
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 111/246 (45%), Gaps = 33/246 (13%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRE-----LQLMRLMDHPNVISLKHCF 139
+G G+FG V++A+ ET +A KV+ + + E + ++ DHPN++ L F
Sbjct: 45 LGDGAFGKVYKAQNKETS-VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLI--YVKLYTYQIFRGLAYIHTV 197
+ + L +++E+ + + PL +++ Q L Y+H
Sbjct: 104 YYENN-----LWILIEFCAGGAVDAV----MLELERPLTESQIQVVCKQTLDALNYLHD- 153
Query: 198 PGVCHRDVKPQNLLVDPLTHQVKLCDFG-SAKVLVKGEANISYICSRYYRAPELIFGATE 256
+ HRD+K N+L L +KL DFG SAK + S+I + Y+ APE++ T
Sbjct: 154 NKIIHRDLKAGNILF-TLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 257 ----YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIK----VLGTPTREEIRCMN 308
Y D+WS G L E+ +P N + L++I K L P+R +
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSR-----WS 267
Query: 309 PNYTDF 314
N+ DF
Sbjct: 268 SNFKDF 273
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 104/209 (49%), Gaps = 21/209 (10%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIK--KVLQDRRYK-NRELQLMRLMDHPNVISLKHCFF 140
+VG G++G V++ + ++TG+ AIK V D + +E+ +++ H I+ + F
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAF 90
Query: 141 STTS----KDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHT 196
+ D+L+ LVME+ L + N + ++ +I RGL+++H
Sbjct: 91 IKKNPPGMDDQLW--LVMEFCGAGSVTDLIKNTKGNT-LKEEWIAYICREILRGLSHLHQ 147
Query: 197 VPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK--GEANISYICSRYYRAPELIF-- 252
V HRD+K QN+L+ +VKL DFG + L + G N ++I + Y+ APE+I
Sbjct: 148 -HKVIHRDIKGQNVLLTE-NAEVKLVDFGVSAQLDRTVGRRN-TFIGTPYWMAPEVIACD 204
Query: 253 ---GATEYTTSIDIWSAGCVLAELLLGQP 278
AT Y D+WS G E+ G P
Sbjct: 205 ENPDAT-YDFKSDLWSLGITAIEMAEGAP 232
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 124/293 (42%), Gaps = 52/293 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F +V + + TG A K ++ RR K+ RE+ +++ + HPNVI
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
+L + + T + L++E V ++ L S+ + ++K QI G+
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 193 YIHTVPGVCHRDVKPQNLLV---DPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
Y+H++ + H D+KP+N+++ + ++K+ DFG A + G + + + APE
Sbjct: 129 YLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
++ D+WS G + LL G F G+ + L + +N
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA------------NVSAVNY 234
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
+ D F A A D RLL P R T ++ HP+
Sbjct: 235 EFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 116/272 (42%), Gaps = 25/272 (9%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ----- 122
GK EP ++ Y ++G+G FG V+ + VAIK V +DR EL
Sbjct: 16 GKEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 74
Query: 123 -----LMRLMDH--PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
L++ + VI L F D L L + ++ + ++ + +
Sbjct: 75 PMEVVLLKKVSSGFSGVIRLLDWF---ERPDSFVLILERPEPVQDLFDFITERGALQEEL 131
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
+ + +Q+ + + H GV HRD+K +N+L+D ++KL DFGS L+K
Sbjct: 132 ----ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTV 185
Query: 236 NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIK 294
+ +R Y PE I + S +WS G +L +++ G P E + V +
Sbjct: 186 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ 245
Query: 295 VLGTPTREEIR-CMNPNYTDF-RFPQIKAHPW 324
+ + IR C+ D F +I+ HPW
Sbjct: 246 RVSXECQHLIRWCLALRPXDRPTFEEIQNHPW 277
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 130/303 (42%), Gaps = 28/303 (9%)
Query: 69 KNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
K EP ++ Y ++G+G FG V+ + VAIK V +DR EL
Sbjct: 2 KEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 123 ----LMRLMDH--PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMP 176
L++ + VI L F D L L + ++ + ++ + +
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWF---ERPDSFVLILERPEPVQDLFDFITERGALQEEL- 116
Query: 177 LIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEAN 236
+ + +Q+ + + H GV HRD+K +N+L+D ++KL DFGS L+K
Sbjct: 117 ---ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVY 171
Query: 237 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKV 295
+ +R Y PE I + S +WS G +L +++ G P E + V +
Sbjct: 172 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 231
Query: 296 LGTPTREEIR-CMNPNYTDF-RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCT 353
+ + + IR C+ +D F +I+ HPW + +P E ++ L PS +
Sbjct: 232 VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQ--DVLLPQETAEIHLHSLSPGPS-KAA 288
Query: 354 ALE 356
ALE
Sbjct: 289 ALE 291
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 124/293 (42%), Gaps = 52/293 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F +V + + TG A K ++ RR K+ RE+ +++ + HPNVI
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
+L + + T + L++E V ++ L S+ + ++K QI G+
Sbjct: 78 TLHEVYENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 193 YIHTVPGVCHRDVKPQNLLV---DPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
Y+H++ + H D+KP+N+++ + ++K+ DFG A + G + + + APE
Sbjct: 129 YLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPE 187
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
++ D+WS G + LL G F G+ + L + +N
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA------------NVSAVNY 234
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
+ D F A A D RLL P R T ++ HP+
Sbjct: 235 EFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 106/229 (46%), Gaps = 33/229 (14%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F IV + + TG+ A K ++ RR + RE+ ++R + HPN+I
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYA-AKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNII 78
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
+L F + T + L++E V ++ L S+ + ++K QI G+
Sbjct: 79 TLHDIFENKTD-----VVLILELVSGGELFDFLAEKESLTEDEATQFLK----QILDGVH 129
Query: 193 YIHTVPGVCHRDVKPQNLLV------DPLTHQVKLCDFGSAKVLVKGEANISYICSRYYR 246
Y+H+ + H D+KP+N+++ +P ++KL DFG A + G + + +
Sbjct: 130 YLHS-KRIAHFDLKPENIMLLDKNVPNP---RIKLIDFGIAHKIEAGNEFKNIFGTPEFV 185
Query: 247 APELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV 295
APE++ D+WS G + LL G F GE + L I V
Sbjct: 186 APEIV-NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV 233
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 121/275 (44%), Gaps = 56/275 (20%)
Query: 85 VGTGSFGIVFQAKCL-----ETGETVAIKKVLQ-----DRRYKNRELQ-LMRLMDHPNVI 133
+G G+FG V +A T TVA+K + + + R EL+ L+ + H NV+
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 134 SL---------------KHCFFSTTSKDELFL----NLVMEYVPETMYRVLKHYSSMNQR 174
+L + C F S +L N + Y PE +Y+
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLST---YLRSKRNEFVPYKPEDLYKDF--------- 144
Query: 175 MPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE 234
+ L ++ Y++Q+ +G+ ++ + + HRD+ +N+L+ + VK+CDFG A+ + K
Sbjct: 145 LTLEHLIXYSFQVAKGMEFLASRKXI-HRDLAARNILLSE-KNVVKICDFGLARDIXKDP 202
Query: 235 ANISYICSRY---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLV 290
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 254
Query: 291 EIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 325
+I + +E R P+YT Q WH
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 289
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 100/211 (47%), Gaps = 35/211 (16%)
Query: 83 RVVGTGSFGIVFQAKCLE-----TGETVAIKKVL-----QDRRYKNRELQLMRLMDHPNV 132
R +G G FG V C + TGE VA+K + Q R RE++++R + H ++
Sbjct: 14 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVPETMYR--VLKHYSSMNQRMPLIYVKLYTYQIFRG 190
+ K C + E + LVMEYVP R + +H + Q + L+ QI G
Sbjct: 73 VKYKGC---CEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLL------LFAQQICEG 123
Query: 191 LAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR------- 243
+AY+H + HR + +N+L+D VK+ DFG AK + +G Y R
Sbjct: 124 MAYLHAQHYI-HRALAARNVLLDN-DRLVKIGDFGLAKAVPEGH---EYYRVREDGDSPV 178
Query: 244 YYRAPELIFGATEYTTSIDIWSAGCVLAELL 274
++ APE + Y S D+WS G L ELL
Sbjct: 179 FWYAPECLKECKFYYAS-DVWSFGVTLYELL 208
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 100/211 (47%), Gaps = 35/211 (16%)
Query: 83 RVVGTGSFGIVFQAKCLE-----TGETVAIKKVL-----QDRRYKNRELQLMRLMDHPNV 132
R +G G FG V C + TGE VA+K + Q R RE++++R + H ++
Sbjct: 15 RDLGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHI 73
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVPETMYR--VLKHYSSMNQRMPLIYVKLYTYQIFRG 190
+ K C + E + LVMEYVP R + +H + Q + L+ QI G
Sbjct: 74 VKYKGC---CEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLL------LFAQQICEG 124
Query: 191 LAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR------- 243
+AY+H + HR + +N+L+D VK+ DFG AK + +G Y R
Sbjct: 125 MAYLHAQHYI-HRALAARNVLLDN-DRLVKIGDFGLAKAVPEGH---EYYRVREDGDSPV 179
Query: 244 YYRAPELIFGATEYTTSIDIWSAGCVLAELL 274
++ APE + Y S D+WS G L ELL
Sbjct: 180 FWYAPECLKECKFYYAS-DVWSFGVTLYELL 209
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 123/293 (41%), Gaps = 52/293 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-----------RELQLMRLMDHPNVI 133
+G+G F +V + + TG A K ++ RR K+ RE+ +++ + HPNVI
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYA-AKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
+L + + T + L+ E V ++ L S+ + ++K QI G+
Sbjct: 78 TLHEVYENKTD-----VILIGELVAGGELFDFLAEKESLTEEEATEFLK----QILNGVY 128
Query: 193 YIHTVPGVCHRDVKPQNLLV---DPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
Y+H++ + H D+KP+N+++ + ++K+ DFG A + G + + + APE
Sbjct: 129 YLHSLQ-IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
++ D+WS G + LL G F G+ + L + +N
Sbjct: 188 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLA------------NVSAVNY 234
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
+ D F A A D RLL P R T ++ HP+
Sbjct: 235 EFEDEYFSNTSAL-------------AKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 123/293 (41%), Gaps = 52/293 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIK--KVLQDRRYK--------NRELQLMRLMDHPNVIS 134
+G+G F IV + + TG A K K Q R + RE+ ++R + H NVI+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 135 LKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L + + T + L++E V ++ L S+++ ++K QI G+ Y
Sbjct: 80 LHDVYENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIK----QILDGVNY 130
Query: 194 IHTVPGVCHRDVKPQN-LLVD---PLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
+HT + H D+KP+N +L+D P+ H +KL DFG A + G + + + APE
Sbjct: 131 LHT-KKIAHFDLKPENIMLLDKNIPIPH-IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE 188
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
++ D+WS G + LL G F G+ + L I V
Sbjct: 189 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV-------------- 233
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
++ + + F + A D +LL R T EA HP+
Sbjct: 234 -----------SYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 121/293 (41%), Gaps = 52/293 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQ----------DRRYKNRELQLMRLMDHPNVIS 134
+G+G F IV + + TG A K + + R RE+ ++R + H NVI+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 135 LKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L + + T + L++E V ++ L S+++ ++K QI G+ Y
Sbjct: 80 LHDVYENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIK----QILDGVNY 130
Query: 194 IHTVPGVCHRDVKPQN-LLVD---PLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
+HT + H D+KP+N +L+D P+ H +KL DFG A + G + + + APE
Sbjct: 131 LHT-KKIAHFDLKPENIMLLDKNIPIPH-IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE 188
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
++ D+WS G + LL G F G+ + L I V
Sbjct: 189 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV-------------- 233
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
++ + + F A D +LL R T EA HP+
Sbjct: 234 -----------SYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 130/298 (43%), Gaps = 50/298 (16%)
Query: 101 TGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-- 158
+ ++IK D +KN ELQ++ + + ++ C T+ DE+++ + EY+
Sbjct: 77 NNDKISIKSKYDD--FKN-ELQIITDIKNEYCLT---CEGIITNYDEVYI--IYEYMEND 128
Query: 159 ------ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLV 212
E + + K+Y+ +P+ +K + +YIH +CHRDVKP N+L+
Sbjct: 129 SILKFDEYFFVLDKNYTCF---IPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM 185
Query: 213 DPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYT-TSIDIWSAGCVLA 271
D +VKL DFG ++ +V + S + + PE + Y +DIWS G L
Sbjct: 186 DK-NGRVKLSDFGESEYMVDKKIKGSR-GTYEFMPPEFFSNESSYNGAKVDIWSLGICLY 243
Query: 272 ELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKR 331
+ F + + LVE+ + T E +P + H + + +K+
Sbjct: 244 VMFYNVVPFSLKIS---LVELFNNIRTKNIE-------------YPLDRNHFLYPLTNKK 287
Query: 332 -------MPPEAIDLASRLLQYSPSLRCTALEACAHPFF-----DELREPNARLPNGR 377
+ E ID L+ +P+ R T+ +A H + ++LRE + L R
Sbjct: 288 STCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNIEDLREFSKELYKKR 345
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 125/291 (42%), Gaps = 37/291 (12%)
Query: 80 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQL-MRLMDHPNVISLKHC 138
+ +V+G G G V Q T E A+K +LQD RE++L R P+++ +
Sbjct: 35 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 93
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA----YI 194
+ + + + L +VME + + +S + R + + +I + + Y+
Sbjct: 94 YENLYAGRKCLL-IVMECLDGG-----ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 147
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANISYICSRYYRAPELIF 252
H++ + HRDVKP+NLL +KL DFG AK + + + YY APE +
Sbjct: 148 HSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VL 205
Query: 253 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 312
G +Y S D+WS G ++ LL G P F + + + + IR
Sbjct: 206 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRIR-----MG 252
Query: 313 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
+ FP + W +V E L LL+ P+ R T E HP+
Sbjct: 253 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 295
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 123/293 (41%), Gaps = 52/293 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIK--KVLQDRRYK--------NRELQLMRLMDHPNVIS 134
+G+G F IV + + TG A K K Q R + RE+ ++R + H NVI+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 135 LKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L + + T + L++E V ++ L S+++ ++K QI G+ Y
Sbjct: 80 LHDVYENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIK----QILDGVNY 130
Query: 194 IHTVPGVCHRDVKPQN-LLVD---PLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
+HT + H D+KP+N +L+D P+ H +KL DFG A + G + + + APE
Sbjct: 131 LHT-KKIAHFDLKPENIMLLDKNIPIPH-IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE 188
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
++ D+WS G + LL G F G+ + L I V
Sbjct: 189 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV-------------- 233
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
++ + + F + A D +LL R T EA HP+
Sbjct: 234 -----------SYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 26/204 (12%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV-----LQDRRYKNRELQLMRLMDHPNVISLKHCF 139
+G GSFG VF+ T + VAIK + + +E+ ++ D P V +
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMN--QRMPLIYVKLYTY--QIFRGLAYIH 195
T L ++MEY L S+++ + PL ++ T +I +GL Y+H
Sbjct: 90 LKDTK-----LWIIMEY--------LGGGSALDLLEPGPLDETQIATILREILKGLDYLH 136
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS-YICSRYYRAPELIFGA 254
+ + HRD+K N+L+ +VKL DFG A L + + ++ + ++ APE+I
Sbjct: 137 SEKKI-HRDIKAANVLLSE-HGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQ 193
Query: 255 TEYTTSIDIWSAGCVLAELLLGQP 278
+ Y + DIWS G EL G+P
Sbjct: 194 SAYDSKADIWSLGITAIELARGEP 217
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 125/291 (42%), Gaps = 37/291 (12%)
Query: 80 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQL-MRLMDHPNVISLKHC 138
+ +V+G G G V Q T E A+K +LQD RE++L R P+++ +
Sbjct: 27 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 85
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA----YI 194
+ + + + L +VME + + +S + R + + +I + + Y+
Sbjct: 86 YENLYAGRKCLL-IVMECLDGG-----ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 139
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANISYICSRYYRAPELIF 252
H++ + HRDVKP+NLL +KL DFG AK + + + YY APE +
Sbjct: 140 HSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VL 197
Query: 253 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 312
G +Y S D+WS G ++ LL G P F + + + + IR
Sbjct: 198 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRIR-----MG 244
Query: 313 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
+ FP + W +V E L LL+ P+ R T E HP+
Sbjct: 245 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 287
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 20/213 (9%)
Query: 72 EPKQTISYMAER-VVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHP 130
E ++ + +M + VG GSFG V + K +TG A+KKV + ++ EL + P
Sbjct: 52 EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-FRVEELVACAGLSSP 110
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
++ L ++ ++N+ ME + ++ +++K + + L Y+ Q
Sbjct: 111 RIVPL-----YGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG----QALE 161
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY----- 244
GL Y+HT + H DVK N+L+ + LCDFG A L S + Y
Sbjct: 162 GLEYLHTRR-ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTE 220
Query: 245 -YRAPELIFGATEYTTSIDIWSAGCVLAELLLG 276
+ APE++ G +DIWS+ C++ +L G
Sbjct: 221 THMAPEVVMGKP-CDAKVDIWSSCCMMLHMLNG 252
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 20/213 (9%)
Query: 72 EPKQTISYMAER-VVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHP 130
E ++ + +M + VG GSFG V + K +TG A+KKV + ++ EL + P
Sbjct: 68 EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-FRVEELVACAGLSSP 126
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
++ L ++ ++N+ ME + ++ +++K + + L Y+ Q
Sbjct: 127 RIVPL-----YGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG----QALE 177
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY----- 244
GL Y+HT + H DVK N+L+ + LCDFG A L S + Y
Sbjct: 178 GLEYLHTRR-ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTE 236
Query: 245 -YRAPELIFGATEYTTSIDIWSAGCVLAELLLG 276
+ APE++ G +DIWS+ C++ +L G
Sbjct: 237 THMAPEVVMGKP-CDAKVDIWSSCCMMLHMLNG 268
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 125/291 (42%), Gaps = 37/291 (12%)
Query: 80 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQL-MRLMDHPNVISLKHC 138
+ +V+G G G V Q T E A+K +LQD RE++L R P+++ +
Sbjct: 71 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 129
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA----YI 194
+ + + + L +VME + + +S + R + + +I + + Y+
Sbjct: 130 YENLYAGRKCLL-IVMECLDGG-----ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 183
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANISYICSRYYRAPELIF 252
H++ + HRDVKP+NLL +KL DFG AK + + + YY APE +
Sbjct: 184 HSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VL 241
Query: 253 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 312
G +Y S D+WS G ++ LL G P F + + + + IR
Sbjct: 242 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRIR-----MG 288
Query: 313 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
+ FP + W +V E L LL+ P+ R T E HP+
Sbjct: 289 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 331
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 117/271 (43%), Gaps = 25/271 (9%)
Query: 69 KNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
K EP ++ Y ++G+G FG V+ + VAIK V +DR EL
Sbjct: 2 KEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 123 ----LMRLMDH--PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMP 176
L++ + VI L F D L L + ++ + ++ + +
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWF---ERPDSFVLILERPEPVQDLFDFITERGALQEEL- 116
Query: 177 LIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEAN 236
+ + +Q+ + + H GV HRD+K +N+L+D ++KL DFGS L+K
Sbjct: 117 ---ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVY 171
Query: 237 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKV 295
+ +R Y PE I + S +WS G +L +++ G P E + V +
Sbjct: 172 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 231
Query: 296 LGTPTREEIR-CMNPNYTDF-RFPQIKAHPW 324
+ + + IR C+ +D F +I+ HPW
Sbjct: 232 VSSECQHLIRWCLALRPSDRPTFEEIQNHPW 262
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 125/291 (42%), Gaps = 37/291 (12%)
Query: 80 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQL-MRLMDHPNVISLKHC 138
+ +V+G G G V Q T E A+K +LQD RE++L R P+++ +
Sbjct: 65 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 123
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA----YI 194
+ + + + L +VME + + +S + R + + +I + + Y+
Sbjct: 124 YENLYAGRKCLL-IVMECLDGG-----ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 177
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANISYICSRYYRAPELIF 252
H++ + HRDVKP+NLL +KL DFG AK + + + YY APE +
Sbjct: 178 HSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VL 235
Query: 253 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 312
G +Y S D+WS G ++ LL G P F + + + + IR
Sbjct: 236 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRIR-----MG 282
Query: 313 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
+ FP + W +V E L LL+ P+ R T E HP+
Sbjct: 283 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 325
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 119/268 (44%), Gaps = 19/268 (7%)
Query: 69 KNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL------- 121
K EP ++ Y ++G+G FG V+ + VAIK V +DR EL
Sbjct: 1 KEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 59
Query: 122 -QLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIY 179
+++ L + S + + F+ ++ P + ++ + ++ + +
Sbjct: 60 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEEL---- 115
Query: 180 VKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISY 239
+ + +Q+ + + H GV HRD+K +N+L+D ++KL DFGS L+K +
Sbjct: 116 ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDF 173
Query: 240 ICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGT 298
+R Y PE I + S +WS G +L +++ G P E + V + + +
Sbjct: 174 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS 233
Query: 299 PTREEIR-CMNPNYTDF-RFPQIKAHPW 324
+ IR C+ +D F +I+ HPW
Sbjct: 234 ECQHLIRWCLALRPSDRPTFEEIQNHPW 261
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 26/204 (12%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV-----LQDRRYKNRELQLMRLMDHPNVISLKHCF 139
+G GSFG VF+ T + VAIK + + +E+ ++ D P V +
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMN--QRMPLIYVKLYTY--QIFRGLAYIH 195
T L ++MEY L S+++ + PL ++ T +I +GL Y+H
Sbjct: 75 LKDTK-----LWIIMEY--------LGGGSALDLLEPGPLDETQIATILREILKGLDYLH 121
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE-ANISYICSRYYRAPELIFGA 254
+ + HRD+K N+L+ +VKL DFG A L + +++ + ++ APE+I
Sbjct: 122 SEKKI-HRDIKAANVLLSE-HGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-KQ 178
Query: 255 TEYTTSIDIWSAGCVLAELLLGQP 278
+ Y + DIWS G EL G+P
Sbjct: 179 SAYDSKADIWSLGITAIELARGEP 202
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 125/291 (42%), Gaps = 37/291 (12%)
Query: 80 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQL-MRLMDHPNVISLKHC 138
+ +V+G G G V Q T E A+K +LQD RE++L R P+++ +
Sbjct: 21 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 79
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA----YI 194
+ + + + L +VME + + +S + R + + +I + + Y+
Sbjct: 80 YENLYAGRKCLL-IVMECLDGG-----ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 133
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANISYICSRYYRAPELIF 252
H++ + HRDVKP+NLL +KL DFG AK + + + YY APE +
Sbjct: 134 HSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VL 191
Query: 253 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 312
G +Y S D+WS G ++ LL G P F + + + + IR
Sbjct: 192 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRIR-----MG 238
Query: 313 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
+ FP + W +V E L LL+ P+ R T E HP+
Sbjct: 239 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 117/271 (43%), Gaps = 25/271 (9%)
Query: 69 KNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
K EP ++ Y ++G+G FG V+ + VAIK V +DR EL
Sbjct: 2 KEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 123 ----LMRLMDH--PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMP 176
L++ + VI L F D L L + ++ + ++ + +
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWF---ERPDSFVLILERPEPVQDLFDFITERGALQEEL- 116
Query: 177 LIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEAN 236
+ + +Q+ + + H GV HRD+K +N+L+D ++KL DFGS L+K
Sbjct: 117 ---ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVY 171
Query: 237 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKV 295
+ +R Y PE I + S +WS G +L +++ G P E + V +
Sbjct: 172 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 231
Query: 296 LGTPTREEIR-CMNPNYTDF-RFPQIKAHPW 324
+ + + IR C+ +D F +I+ HPW
Sbjct: 232 VSSECQHLIRWCLALRPSDRPTFEEIQNHPW 262
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 125/291 (42%), Gaps = 37/291 (12%)
Query: 80 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQL-MRLMDHPNVISLKHC 138
+ +V+G G G V Q T E A+K +LQD RE++L R P+++ +
Sbjct: 25 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 83
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA----YI 194
+ + + + L +VME + + +S + R + + +I + + Y+
Sbjct: 84 YENLYAGRKCLL-IVMECLDGG-----ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 137
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANISYICSRYYRAPELIF 252
H++ + HRDVKP+NLL +KL DFG AK + + + YY APE +
Sbjct: 138 HSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VL 195
Query: 253 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 312
G +Y S D+WS G ++ LL G P F + + + + IR
Sbjct: 196 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRIR-----MG 242
Query: 313 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
+ FP + W +V E L LL+ P+ R T E HP+
Sbjct: 243 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 285
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 122/293 (41%), Gaps = 52/293 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIK--KVLQDRRYK--------NRELQLMRLMDHPNVIS 134
+G+G F IV + + TG A K K Q R + RE+ ++R + H NVI+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 135 LKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L + + T + L++E V ++ L S+++ ++K QI G+ Y
Sbjct: 80 LHDVYENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIK----QILDGVNY 130
Query: 194 IHTVPGVCHRDVKPQN-LLVD---PLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
+HT + H D+KP+N +L+D P+ H +KL DFG A + G + + + APE
Sbjct: 131 LHT-KKIAHFDLKPENIMLLDKNIPIPH-IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE 188
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
++ D+WS G + LL G F G+ + L I V
Sbjct: 189 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV-------------- 233
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
++ + + F A D +LL R T EA HP+
Sbjct: 234 -----------SYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 117/271 (43%), Gaps = 25/271 (9%)
Query: 69 KNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
K EP ++ Y ++G+G FG V+ + VAIK V +DR EL
Sbjct: 1 KEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 59
Query: 123 ----LMRLMDH--PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMP 176
L++ + VI L F D L L + ++ + ++ + +
Sbjct: 60 MEVVLLKKVSSGFSGVIRLLDWF---ERPDSFVLILERPEPVQDLFDFITERGALQEEL- 115
Query: 177 LIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEAN 236
+ + +Q+ + + H GV HRD+K +N+L+D ++KL DFGS L+K
Sbjct: 116 ---ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVY 170
Query: 237 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKV 295
+ +R Y PE I + S +WS G +L +++ G P E + V +
Sbjct: 171 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 230
Query: 296 LGTPTREEIR-CMNPNYTDF-RFPQIKAHPW 324
+ + + IR C+ +D F +I+ HPW
Sbjct: 231 VSSECQHLIRWCLALRPSDRPTFEEIQNHPW 261
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 125/291 (42%), Gaps = 37/291 (12%)
Query: 80 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQL-MRLMDHPNVISLKHC 138
+ +V+G G G V Q T E A+K +LQD RE++L R P+++ +
Sbjct: 26 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 84
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA----YI 194
+ + + + L +VME + + +S + R + + +I + + Y+
Sbjct: 85 YENLYAGRKCLL-IVMECLDGG-----ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 138
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANISYICSRYYRAPELIF 252
H++ + HRDVKP+NLL +KL DFG AK + + + YY APE +
Sbjct: 139 HSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VL 196
Query: 253 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 312
G +Y S D+WS G ++ LL G P F + + + + IR
Sbjct: 197 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRIR-----MG 243
Query: 313 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
+ FP + W +V E L LL+ P+ R T E HP+
Sbjct: 244 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 286
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 125/291 (42%), Gaps = 37/291 (12%)
Query: 80 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQL-MRLMDHPNVISLKHC 138
+ +V+G G G V Q T E A+K +LQD RE++L R P+++ +
Sbjct: 20 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 78
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA----YI 194
+ + + + L +VME + + +S + R + + +I + + Y+
Sbjct: 79 YENLYAGRKCLL-IVMECLDGG-----ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 132
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANISYICSRYYRAPELIF 252
H++ + HRDVKP+NLL +KL DFG AK + + + YY APE +
Sbjct: 133 HSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VL 190
Query: 253 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 312
G +Y S D+WS G ++ LL G P F + + + + IR
Sbjct: 191 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRIR-----MG 237
Query: 313 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
+ FP + W +V E L LL+ P+ R T E HP+
Sbjct: 238 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 280
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 125/291 (42%), Gaps = 37/291 (12%)
Query: 80 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQL-MRLMDHPNVISLKHC 138
+ +V+G G G V Q T E A+K +LQD RE++L R P+++ +
Sbjct: 19 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 77
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA----YI 194
+ + + + L +VME + + +S + R + + +I + + Y+
Sbjct: 78 YENLYAGRKCLL-IVMECLDGG-----ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 131
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANISYICSRYYRAPELIF 252
H++ + HRDVKP+NLL +KL DFG AK + + + YY APE +
Sbjct: 132 HSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VL 189
Query: 253 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 312
G +Y S D+WS G ++ LL G P F + + + + IR
Sbjct: 190 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRIR-----MG 236
Query: 313 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
+ FP + W +V E L LL+ P+ R T E HP+
Sbjct: 237 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 144/335 (42%), Gaps = 58/335 (17%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR---ELQLMRLMDHPNVIS 134
+++ R +G G+FG V + ++ + A+K V ++Y E +++ + + ++ +
Sbjct: 36 AFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINN 95
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVL--KHYSSMNQRMPLIYVKLYTYQIFRGLA 192
+ + L+ E + ++Y ++ +Y+ + + +KLY +I + L
Sbjct: 96 NNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFH----IEDIKLYCIEILKALN 151
Query: 193 YIHTVPGVCHRDVKPQNLLVD------------------------PLTHQVKLCDFGSAK 228
Y+ + + H D+KP+N+L+D + +KL DFG A
Sbjct: 152 YLRKM-SLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCAT 210
Query: 229 VLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQ 288
K + + S I +R YRAPE+I + S D+WS GCVLAEL G LF ++
Sbjct: 211 F--KSDYHGSIINTRQYRAPEVILNLG-WDVSSDMWSFGCVLAELYTGSLLFRTHEHMEH 267
Query: 289 LVEIIKVL----------GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFH--KRMPPEA 336
L + ++ T T + +N + +P+ A + + H K +P
Sbjct: 268 LAMMESIIQPIPKNMLYEATKTNGS-KYVNKDELKLAWPE-NASSINSIKHVKKCLPLYK 325
Query: 337 I-------DLASRLLQYSPSLRCTALEACAHPFFD 364
I D +LQ P+LR + E H F +
Sbjct: 326 IIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 122/293 (41%), Gaps = 52/293 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIK--KVLQDRRYK--------NRELQLMRLMDHPNVIS 134
+G+G F IV + + TG A K K Q R + RE+ ++R + H NVI+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 135 LKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L + + T + L++E V ++ L S+++ ++K QI G+ Y
Sbjct: 80 LHDVYENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIK----QILDGVNY 130
Query: 194 IHTVPGVCHRDVKPQN-LLVD---PLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
+HT + H D+KP+N +L+D P+ H +KL DFG A + G + + + APE
Sbjct: 131 LHT-KKIAHFDLKPENIMLLDKNIPIPH-IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPE 188
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP 309
++ D+WS G + LL G F G+ + L I V
Sbjct: 189 IV-NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV-------------- 233
Query: 310 NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
++ + + F A D +LL R T EA HP+
Sbjct: 234 -----------SYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 26/204 (12%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV-----LQDRRYKNRELQLMRLMDHPNVISLKHCF 139
+G GSFG VF+ T + VAIK + + +E+ ++ D P V +
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 94
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMN--QRMPLIYVKLYTY--QIFRGLAYIH 195
T L ++MEY L S+++ + PL ++ T +I +GL Y+H
Sbjct: 95 LKDTK-----LWIIMEY--------LGGGSALDLLEPGPLDETQIATILREILKGLDYLH 141
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEAN-ISYICSRYYRAPELIFGA 254
+ + HRD+K N+L+ +VKL DFG A L + +++ + ++ APE+I
Sbjct: 142 SEKKI-HRDIKAANVLLSE-HGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-KQ 198
Query: 255 TEYTTSIDIWSAGCVLAELLLGQP 278
+ Y + DIWS G EL G+P
Sbjct: 199 SAYDSKADIWSLGITAIELARGEP 222
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 125/291 (42%), Gaps = 37/291 (12%)
Query: 80 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQL-MRLMDHPNVISLKHC 138
+ +V+G G G V Q T E A+K +LQD RE++L R P+++ +
Sbjct: 21 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 79
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA----YI 194
+ + + + L +VME + + +S + R + + +I + + Y+
Sbjct: 80 YENLYAGRKCLL-IVMECLDGG-----ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 133
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANISYICSRYYRAPELIF 252
H++ + HRDVKP+NLL +KL DFG AK + + + YY APE +
Sbjct: 134 HSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VL 191
Query: 253 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 312
G +Y S D+WS G ++ LL G P F + + + + IR
Sbjct: 192 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRIR-----MG 238
Query: 313 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
+ FP + W +V E L LL+ P+ R T E HP+
Sbjct: 239 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 26/204 (12%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV-----LQDRRYKNRELQLMRLMDHPNVISLKHCF 139
+G GSFG VF+ T + VAIK + + +E+ ++ D P V +
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMN--QRMPLIYVKLYTY--QIFRGLAYIH 195
T L ++MEY L S+++ + PL ++ T +I +GL Y+H
Sbjct: 75 LKDTK-----LWIIMEY--------LGGGSALDLLEPGPLDETQIATILREILKGLDYLH 121
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS-YICSRYYRAPELIFGA 254
+ + HRD+K N+L+ +VKL DFG A L + + ++ + ++ APE+I
Sbjct: 122 SEKKI-HRDIKAANVLLSE-HGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQ 178
Query: 255 TEYTTSIDIWSAGCVLAELLLGQP 278
+ Y + DIWS G EL G+P
Sbjct: 179 SAYDSKADIWSLGITAIELARGEP 202
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 110/246 (44%), Gaps = 33/246 (13%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRE-----LQLMRLMDHPNVISLKHCF 139
+G G+FG V++A+ ET +A KV+ + + E + ++ DHPN++ L F
Sbjct: 45 LGDGAFGKVYKAQNKETS-VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLI--YVKLYTYQIFRGLAYIHTV 197
+ + L +++E+ + + PL +++ Q L Y+H
Sbjct: 104 YYENN-----LWILIEFCAGGAVDAV----MLELERPLTESQIQVVCKQTLDALNYLHD- 153
Query: 198 PGVCHRDVKPQNLLVDPLTHQVKLCDFG-SAKVLVKGEANISYICSRYYRAPELIFGATE 256
+ HRD+K N+L L +KL DFG SAK + +I + Y+ APE++ T
Sbjct: 154 NKIIHRDLKAGNILF-TLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETS 212
Query: 257 ----YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIK----VLGTPTREEIRCMN 308
Y D+WS G L E+ +P N + L++I K L P+R +
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSR-----WS 267
Query: 309 PNYTDF 314
N+ DF
Sbjct: 268 SNFKDF 273
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 104/238 (43%), Gaps = 32/238 (13%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN---RELQLMRLMDHPNVISLKHCFF 140
V+G G+FG V +A+ AIKK+ + E+ L+ ++H V+ +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWL 72
Query: 141 S--------TTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
T K + L + EY L H ++NQ+ Y +L+ QI L+
Sbjct: 73 ERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDE-YWRLFR-QILEALS 130
Query: 193 YIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK-------VLVKGEANI-------- 237
YIH+ G+ HR++KP N+ +D + VK+ DFG AK +L N+
Sbjct: 131 YIHS-QGIIHRNLKPXNIFIDE-SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 238 SYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV 295
S I + Y A E++ G Y ID +S G + E + P G V+ L ++ V
Sbjct: 189 SAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY--PFSTGXERVNILKKLRSV 244
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 124/291 (42%), Gaps = 37/291 (12%)
Query: 80 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQL-MRLMDHPNVISLKHC 138
+ +V+G G G V Q T E A+K +LQD RE++L R P+++ +
Sbjct: 19 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 77
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA----YI 194
+ + + + L +VME + + +S + R + + +I + + Y+
Sbjct: 78 YENLYAGRKCLL-IVMECLDGG-----ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 131
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANISYICSRYYRAPELIF 252
H++ + HRDVKP+NLL +KL DFG AK + + YY APE +
Sbjct: 132 HSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPE-VL 189
Query: 253 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 312
G +Y S D+WS G ++ LL G P F + + + + IR
Sbjct: 190 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRIR-----MG 236
Query: 313 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
+ FP + W +V E L LL+ P+ R T E HP+
Sbjct: 237 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 126/319 (39%), Gaps = 51/319 (15%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM-------DHPNVISL 135
+V+G G+F V K +TG+ A+K + + K E+ R D + L
Sbjct: 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQL 126
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
F +DE +L LVMEY +L S +R+P + Y +I + +H
Sbjct: 127 HFAF-----QDENYLYLVMEYY--VGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH 179
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSA-KVLVKGEA-NISYICSRYYRAPELIFG 253
+ G HRD+KP N+L+D H ++L DFGS K+ G ++ + + Y +PE++
Sbjct: 180 RL-GYVHRDIKPDNILLDRCGH-IRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQA 237
Query: 254 ATEYTT------SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM 307
D W+ G E+ GQ F ++ + +I+
Sbjct: 238 VGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIV-------------- 283
Query: 308 NPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSL--RCTALEACAHPFFDE 365
K H + + +P EA D RLL + R A + HPFF
Sbjct: 284 ----------HYKEHLSLPLVDEGVPEEARDFIQRLLCPPETRLGRGGAGDFRTHPFFFG 333
Query: 366 LREPNARLPNGRPFPPLFN 384
L R + PF P F
Sbjct: 334 LDWDGLR-DSVPPFTPDFE 351
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 116/271 (42%), Gaps = 25/271 (9%)
Query: 69 KNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------ 122
K EP ++ Y ++G+G FG V+ + VAIK V +DR EL
Sbjct: 24 KEKEPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 82
Query: 123 ----LMRLMDH--PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMP 176
L++ + VI L F D L L + ++ + ++ + +
Sbjct: 83 MEVVLLKKVSSGFSGVIRLLDWF---ERPDSFVLILERPEPVQDLFDFITERGALQEEL- 138
Query: 177 LIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEAN 236
+ + +Q+ + + H GV HRD+K +N+L+D ++KL DFGS L+K
Sbjct: 139 ---ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVY 193
Query: 237 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKV 295
+ +R Y PE I + S +WS G +L +++ G P E + V +
Sbjct: 194 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR 253
Query: 296 LGTPTREEIR-CMNPNYTDF-RFPQIKAHPW 324
+ + IR C+ +D F +I+ HPW
Sbjct: 254 VSXECQHLIRWCLALRPSDRPTFEEIQNHPW 284
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 20/213 (9%)
Query: 72 EPKQTISYMAER-VVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHP 130
E ++ + +M + +G GSFG V + K +TG A+KKV + ++ EL + P
Sbjct: 66 EYREEVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-FRVEELVACAGLSSP 124
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
++ L ++ ++N+ ME + ++ +++K + + L Y+ Q
Sbjct: 125 RIVPL-----YGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLG----QALE 175
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY----- 244
GL Y+HT + H DVK N+L+ + LCDFG A L S + Y
Sbjct: 176 GLEYLHTRR-ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTE 234
Query: 245 -YRAPELIFGATEYTTSIDIWSAGCVLAELLLG 276
+ APE++ G +DIWS+ C++ +L G
Sbjct: 235 THMAPEVVMGKP-CDAKVDIWSSCCMMLHMLNG 266
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 26/204 (12%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV-----LQDRRYKNRELQLMRLMDHPNVISLKHCF 139
+G GSFG V++ T E VAIK + + +E+ ++ D P + +
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMP----LIYVKLYTYQIFRGLAYIH 195
+T L ++MEY L S+++ P Y+ +I +GL Y+H
Sbjct: 87 LKSTK-----LWIIMEY--------LGGGSALDLLKPGPLEETYIATILREILKGLDYLH 133
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS-YICSRYYRAPELIFGA 254
+ + HRD+K N+L+ VKL DFG A L + + ++ + ++ APE+I
Sbjct: 134 SERKI-HRDIKAANVLLSE-QGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQ 190
Query: 255 TEYTTSIDIWSAGCVLAELLLGQP 278
+ Y DIWS G EL G+P
Sbjct: 191 SAYDFKADIWSLGITAIELAKGEP 214
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 183 YTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICS 242
Y++Q+ RG+ ++ + + HRD+ +N+L+ + VK+CDFG A+ + K + +
Sbjct: 204 YSFQVARGMEFLSSRKCI-HRDLAARNILLSE-NNVVKICDFGLARDIYKNPDYVRKGDT 261
Query: 243 RY---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKVLGT 298
R + APE IF Y+T D+WS G +L E+ LG +PG V++ + +
Sbjct: 262 RLPLKWMAPESIFDKI-YSTKSDVWSYGVLLWEIFSLGGSPYPG-------VQMDEDFCS 313
Query: 299 PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 343
RE +R P Y+ QI WH+ +R P +L +L
Sbjct: 314 RLREGMRMRAPEYSTPEIYQIMLDCWHRDPKER--PRFAELVEKL 356
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 96/220 (43%), Gaps = 17/220 (7%)
Query: 73 PKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRL 126
P + Y +GTGS+G + + G+ + K++ +++ E+ L+R
Sbjct: 2 PSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE 61
Query: 127 MDHPNVISLKHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTY 185
+ HPN++ T+ L +VMEY + V+ + Q + +V
Sbjct: 62 LKHPNIVRYYDRIIDRTNTT---LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 186 QIFRGLAYIHTVPG----VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA-NISYI 240
Q+ L H V HRD+KP N+ +D VKL DFG A++L E ++
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDG-KQNVKLGDFGLARILNHDEDFAKEFV 177
Query: 241 CSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF 280
+ YY +PE + Y DIWS GC+L EL P F
Sbjct: 178 GTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 112/261 (42%), Gaps = 24/261 (9%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ----------LMRLMD 128
Y ++G+G FG V+ + VAIK V +DR EL L++ +
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 129 H--PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ 186
VI L F D L L + ++ + ++ + + + + +Q
Sbjct: 66 SGFSGVIRLLDWF---ERPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQ 118
Query: 187 IFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYR 246
+ + + H GV HRD+K +N+L+D ++KL DFGS L+K + +R Y
Sbjct: 119 VLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYS 176
Query: 247 APELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTREEIR 305
PE I + S +WS G +L +++ G P E + V + + + + IR
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHLIR 236
Query: 306 -CMNPNYTDF-RFPQIKAHPW 324
C+ +D F +I+ HPW
Sbjct: 237 WCLALRPSDRPTFEEIQNHPW 257
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 116/268 (43%), Gaps = 25/268 (9%)
Query: 72 EPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ--------- 122
EP ++ Y ++G+G FG V+ + VAIK V +DR EL
Sbjct: 3 EPLES-QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV 61
Query: 123 -LMRLMDH--PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIY 179
L++ + VI L F D L L + ++ + ++ + +
Sbjct: 62 VLLKKVSSGFSGVIRLLDWF---ERPDSFVLILERPEPVQDLFDFITERGALQEEL---- 114
Query: 180 VKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISY 239
+ + +Q+ + + H GV HRD+K +N+L+D ++KL DFGS L+K +
Sbjct: 115 ARSFFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDF 172
Query: 240 ICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGT 298
+R Y PE I + S +WS G +L +++ G P E + V + + +
Sbjct: 173 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSS 232
Query: 299 PTREEIR-CMNPNYTDF-RFPQIKAHPW 324
+ IR C+ +D F +I+ HPW
Sbjct: 233 ECQHLIRWCLALRPSDRPTFEEIQNHPW 260
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 112/261 (42%), Gaps = 24/261 (9%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL----------QLMRLMD 128
Y ++G+G FG V+ + VAIK V +DR EL L++ +
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 129 H--PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ 186
VI L F D L L + ++ + ++ + + + + +Q
Sbjct: 66 SGFSGVIRLLDWF---ERPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQ 118
Query: 187 IFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYR 246
+ + + H GV HRD+K +N+L+D ++KL DFGS L+K + +R Y
Sbjct: 119 VLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYS 176
Query: 247 APELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTREEIR 305
PE I + S +WS G +L +++ G P E + V + + + + IR
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIR 236
Query: 306 -CMNPNYTDF-RFPQIKAHPW 324
C+ +D F +I+ HPW
Sbjct: 237 WCLALRPSDRPTFEEIQNHPW 257
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 139/333 (41%), Gaps = 66/333 (19%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKV----------LQDRRYKNRELQLMRLMDHPNVI 133
V+G G F +V + ETG+ A+K V L K RE + ++ HP+++
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK-REASICHMLKHPHIV 91
Query: 134 SLKHCFFSTTSKDELFLNLVMEYV--PETMYRVLKHYSSMNQRMPLIYVKL----YTYQI 187
L T S D + L +V E++ + + ++K + +Y + Y QI
Sbjct: 92 EL----LETYSSDGM-LYMVFEFMDGADLCFEIVKRADA-----GFVYSEAVASHYMRQI 141
Query: 188 FRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANI---SYICS 242
L Y H + HRDVKP +L+ + VKL FG A L GE+ + + +
Sbjct: 142 LEALRYCHD-NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GESGLVAGGRVGT 198
Query: 243 RYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 302
++ APE++ Y +D+W G +L LL G F G ++L E I + G
Sbjct: 199 PHFMAPEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGI-IKGKYK-- 252
Query: 303 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
MNP W + A DL R+L P+ R T EA HP+
Sbjct: 253 ----MNPR------------QWSHI-----SESAKDLVRRMLMLDPAERITVYEALNHPW 291
Query: 363 FDELREPNA---RLPNGRPFPPLFNFKQELAGA 392
E R+ A LP FN +++L GA
Sbjct: 292 LKE-RDRYAYKIHLPETVEQLRKFNARRKLKGA 323
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 93/199 (46%), Gaps = 19/199 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTS 144
+G GSFG V + + +TG A+KKV + ++ EL + P ++ L
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEV-FRAEELMACAGLTSPRIVPLY-----GAV 154
Query: 145 KDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHR 203
++ ++N+ ME + ++ +++K + + L Y+ Q GL Y+H+ + H
Sbjct: 155 REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLG----QALEGLEYLHSRR-ILHG 209
Query: 204 DVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY------YRAPELIFGATEY 257
DVK N+L+ LCDFG A L S + Y + APE++ G +
Sbjct: 210 DVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRS-C 268
Query: 258 TTSIDIWSAGCVLAELLLG 276
+D+WS+ C++ +L G
Sbjct: 269 DAKVDVWSSCCMMLHMLNG 287
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 139/333 (41%), Gaps = 66/333 (19%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKV----------LQDRRYKNRELQLMRLMDHPNVI 133
V+G G F +V + ETG+ A+K V L K RE + ++ HP+++
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLK-REASICHMLKHPHIV 89
Query: 134 SLKHCFFSTTSKDELFLNLVMEYV--PETMYRVLKHYSSMNQRMPLIYVKL----YTYQI 187
L T S D + L +V E++ + + ++K + +Y + Y QI
Sbjct: 90 EL----LETYSSDGM-LYMVFEFMDGADLCFEIVKRADA-----GFVYSEAVASHYMRQI 139
Query: 188 FRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANI---SYICS 242
L Y H + HRDVKP +L+ + VKL FG A L GE+ + + +
Sbjct: 140 LEALRYCHD-NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQL--GESGLVAGGRVGT 196
Query: 243 RYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE 302
++ APE++ Y +D+W G +L LL G F G ++L E I + G
Sbjct: 197 PHFMAPEVV-KREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGI-IKGKYK-- 250
Query: 303 EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPF 362
MNP W + A DL R+L P+ R T EA HP+
Sbjct: 251 ----MNPR------------QWSHI-----SESAKDLVRRMLMLDPAERITVYEALNHPW 289
Query: 363 FDELREPNA---RLPNGRPFPPLFNFKQELAGA 392
E R+ A LP FN +++L GA
Sbjct: 290 LKE-RDRYAYKIHLPETVEQLRKFNARRKLKGA 321
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 30/207 (14%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQD----RRYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TG VA+K++ +R RE+Q+++ + ++ +
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYR--VLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
+ + L LVMEY+P R + +H + ++ L LY+ QI +G+ Y+
Sbjct: 79 GVSYGPGRQS---LRLVMEYLPSGCLRDFLQRHRARLDASRLL----LYSSQICKGMEYL 131
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-------VKGEANISYICSRYYRA 247
+ V HRD+ +N+LV+ H VK+ DFG AK+L V E S I ++ A
Sbjct: 132 GSRRCV-HRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPI---FWYA 186
Query: 248 PELIFGATEYTTSIDIWSAGCVLAELL 274
PE + ++ D+WS G VL EL
Sbjct: 187 PESL-SDNIFSRQSDVWSFGVVLYELF 212
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 30/207 (14%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQD----RRYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TG VA+K++ +R RE+Q+++ + ++ +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYR--VLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
+ + L LVMEY+P R + +H + ++ L LY+ QI +G+ Y+
Sbjct: 78 GVSYGPGRQS---LRLVMEYLPSGCLRDFLQRHRARLDASRLL----LYSSQICKGMEYL 130
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-------VKGEANISYICSRYYRA 247
+ V HRD+ +N+LV+ H VK+ DFG AK+L V E S I ++ A
Sbjct: 131 GSRRCV-HRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPI---FWYA 185
Query: 248 PELIFGATEYTTSIDIWSAGCVLAELL 274
PE + ++ D+WS G VL EL
Sbjct: 186 PESL-SDNIFSRQSDVWSFGVVLYELF 211
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 97/220 (44%), Gaps = 17/220 (7%)
Query: 73 PKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRL 126
P + Y +GTGS+G + + G+ + K++ +++ E+ L+R
Sbjct: 2 PSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE 61
Query: 127 MDHPNVISLKHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTY 185
+ HPN++ T+ L +VMEY + V+ + Q + +V
Sbjct: 62 LKHPNIVRYYDRIIDRTNTT---LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 186 QIFRGLAYIHTVPG----VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA-NISYI 240
Q+ L H V HRD+KP N+ +D VKL DFG A++L + +++
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDG-KQNVKLGDFGLARILNHDTSFAKTFV 177
Query: 241 CSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF 280
+ YY +PE + Y DIWS GC+L EL P F
Sbjct: 178 GTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 30/207 (14%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQD----RRYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TG VA+K++ +R RE+Q+++ + ++ +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYR--VLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
+ + L LVMEY+P R + +H + ++ L LY+ QI +G+ Y+
Sbjct: 91 GVSYGPGRQS---LRLVMEYLPSGCLRDFLQRHRARLDASRLL----LYSSQICKGMEYL 143
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-------VKGEANISYICSRYYRA 247
+ V HRD+ +N+LV+ H VK+ DFG AK+L V E S I ++ A
Sbjct: 144 GSRRCV-HRDLAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPI---FWYA 198
Query: 248 PELIFGATEYTTSIDIWSAGCVLAELL 274
PE + ++ D+WS G VL EL
Sbjct: 199 PESL-SDNIFSRQSDVWSFGVVLYELF 224
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 97/220 (44%), Gaps = 17/220 (7%)
Query: 73 PKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKV------LQDRRYKNRELQLMRL 126
P + Y +GTGS+G + + G+ + K++ +++ E+ L+R
Sbjct: 2 PSRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRE 61
Query: 127 MDHPNVISLKHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTY 185
+ HPN++ T+ L +VMEY + V+ + Q + +V
Sbjct: 62 LKHPNIVRYYDRIIDRTNTT---LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 186 QIFRGLAYIHTVPG----VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA-NISYI 240
Q+ L H V HRD+KP N+ +D VKL DFG A++L + +++
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDG-KQNVKLGDFGLARILNHDTSFAKAFV 177
Query: 241 CSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF 280
+ YY +PE + Y DIWS GC+L EL P F
Sbjct: 178 GTPYYMSPEQM-NRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 140/366 (38%), Gaps = 88/366 (24%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM--------DHP 130
Y R +G G F V+ + ++ + VA+K V Y L +RL+ + P
Sbjct: 39 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDP 98
Query: 131 N---VISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQI 187
N V+ L F + + + +V E + + + + S Q +PL VK Q+
Sbjct: 99 NREMVVQLLDDF-KISGVNGTHICMVFEVLGHHLLKWI--IKSNYQGLPLPCVKKIIQQV 155
Query: 188 FRGLAYIHTVPGVCHRDVKPQNL------------------------------------- 210
+GL Y+HT + H D+KP+N+
Sbjct: 156 LQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPA 215
Query: 211 -----LVDPL------THQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYTT 259
LV+PL +VK+ D G+A + K I +R YR+ E++ G+ Y T
Sbjct: 216 TAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK--HFTEDIQTRQYRSLEVLIGSG-YNT 272
Query: 260 SIDIWSAGCVLAELLLGQPLF---PGENAV---DQLVEIIKVLGTPTREEIRCMNPNYTD 313
DIWS C+ EL G LF GE D + II++LG R+ I + Y+
Sbjct: 273 PADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLI--VAGKYSK 330
Query: 314 FRFPQ-------IKAHPW--------HKVFHKRMPPEAIDLASRLLQYSPSLRCTALEAC 358
F + K PW + + D +L+ P R TA E
Sbjct: 331 EFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECL 390
Query: 359 AHPFFD 364
HP+ +
Sbjct: 391 RHPWLN 396
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 128/306 (41%), Gaps = 46/306 (15%)
Query: 80 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQ----DRRYKNRELQ-LMRLMDHPNVIS 134
+ ++G G++ V A L+ G+ A+K + + R RE++ L + + N++
Sbjct: 16 LTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILE 75
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L F +D+ LV E + ++ ++ N+R V+ + L +
Sbjct: 76 LIEFF-----EDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVR----DVAAALDF 126
Query: 194 IHTVPGVCHRDVKPQNLLVDP--LTHQVKLCDF--GSAKVLVKGEANISY------ICSR 243
+HT G+ HRD+KP+N+L + VK+CDF GS L I+ S
Sbjct: 127 LHT-KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSA 185
Query: 244 YYRAPELIF----GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVD---QLVEIIKVL 296
Y APE++ AT Y D+WS G VL +L G P F G D E+ +V
Sbjct: 186 EYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVC 245
Query: 297 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALE 356
E I+ + D + I + EA DL S+LL R +A +
Sbjct: 246 QNKLFESIQEGKYEFPDKDWAHISS-------------EAKDLISKLLVRDAKQRLSAAQ 292
Query: 357 ACAHPF 362
HP+
Sbjct: 293 VLQHPW 298
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 111/261 (42%), Gaps = 24/261 (9%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ----------LMRLMD 128
Y ++G+G FG V+ + VAIK V +DR EL L++ +
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 129 H--PNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ 186
VI L F D L L + ++ + ++ + + + + +Q
Sbjct: 66 SGFSGVIRLLDWF---ERPDSFVLILERPEPVQDLFDFITERGALQEEL----ARSFFWQ 118
Query: 187 IFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYR 246
+ + + H GV HRD+K +N+L+D ++KL DFGS L+K + +R Y
Sbjct: 119 VLEAVRHCHNX-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGTRVYS 176
Query: 247 APELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTREEIR 305
PE I + S +WS G +L +++ G P E + V + + + IR
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHLIR 236
Query: 306 -CMNPNYTDF-RFPQIKAHPW 324
C+ +D F +I+ HPW
Sbjct: 237 WCLALRPSDRPTFEEIQNHPW 257
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 30/207 (14%)
Query: 85 VGTGSFGIV----FQAKCLETGETVAIKKVLQD----RRYKNRELQLMRLMDHPNVISLK 136
+G G+FG V + TG VA+K++ +R RE+Q+++ + ++ +
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYR--VLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
+ + L LVMEY+P R + +H + ++ L LY+ QI +G+ Y+
Sbjct: 75 GVSYGPGRPE---LRLVMEYLPSGCLRDFLQRHRARLDASRLL----LYSSQICKGMEYL 127
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL-------VKGEANISYICSRYYRA 247
+ V HRD+ +N+LV+ H VK+ DFG AK+L V E S I ++ A
Sbjct: 128 GSRRCV-HRDLAARNILVESEAH-VKIADFGLAKLLPLDKDXXVVREPGQSPI---FWYA 182
Query: 248 PELIFGATEYTTSIDIWSAGCVLAELL 274
PE + ++ D+WS G VL EL
Sbjct: 183 PESL-SDNIFSRQSDVWSFGVVLYELF 208
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 140/366 (38%), Gaps = 88/366 (24%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM--------DHP 130
Y R +G G F V+ + ++ + VA+K V Y L +RL+ + P
Sbjct: 23 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDP 82
Query: 131 N---VISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQI 187
N V+ L F + + + +V E + + + + S Q +PL VK Q+
Sbjct: 83 NREMVVQLLDDF-KISGVNGTHICMVFEVLGHHLLKWI--IKSNYQGLPLPCVKKIIQQV 139
Query: 188 FRGLAYIHTVPGVCHRDVKPQNL------------------------------------- 210
+GL Y+HT + H D+KP+N+
Sbjct: 140 LQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPA 199
Query: 211 -----LVDPL------THQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYTT 259
LV+PL +VK+ D G+A + K I +R YR+ E++ G+ Y T
Sbjct: 200 TAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK--HFTEDIQTRQYRSLEVLIGSG-YNT 256
Query: 260 SIDIWSAGCVLAELLLGQPLF---PGENAV---DQLVEIIKVLGTPTREEIRCMNPNYTD 313
DIWS C+ EL G LF GE D + II++LG R+ I + Y+
Sbjct: 257 PADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLI--VAGKYSK 314
Query: 314 FRFPQ-------IKAHPWHKV--------FHKRMPPEAIDLASRLLQYSPSLRCTALEAC 358
F + K PW + + D +L+ P R TA E
Sbjct: 315 EFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECL 374
Query: 359 AHPFFD 364
HP+ +
Sbjct: 375 RHPWLN 380
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 122/268 (45%), Gaps = 44/268 (16%)
Query: 85 VGTGSFGIVFQAKCL-----ETGETVAIKKVLQ-----DRRYKNRELQ-LMRLMDHPNVI 133
+G G+FG V +A T TVA+K + + + R EL+ L+ + H NV+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHY--SSMNQRMP----------LIYVK 181
+L +K L +++E+ + L Y S N+ +P L ++
Sbjct: 95 NL----LGACTKPGGPLMVIVEFCK---FGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLI 147
Query: 182 LYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYIC 241
Y++Q+ +G+ ++ + + HRD+ +N+L+ + VK+CDFG A+ + K +
Sbjct: 148 CYSFQVAKGMEFLASRKXI-HRDLAARNILLSE-KNVVKICDFGLARDIYKDPDYVRKGD 205
Query: 242 SRY---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKVLG 297
+R + APE IF YT D+WS G +L E+ LG +PG V+I +
Sbjct: 206 ARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFC 257
Query: 298 TPTREEIRCMNPNYTDFRFPQIKAHPWH 325
+E R P+YT Q WH
Sbjct: 258 RRLKEGTRMRAPDYTTPEMYQTMLDCWH 285
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 24/226 (10%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR--------ELQLMRLMDHPNVIS 134
+V+G G+FG V K L+ + V K+L R E ++ D + +
Sbjct: 80 KVIGRGAFGEVAVVK-LKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITT 138
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L + F +D+ L LVM+Y +L S R+P + Y ++ + +
Sbjct: 139 LHYAF-----QDDNNLYLVMDYY--VGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSV 191
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSA-KVLVKGEANISY-ICSRYYRAPELI- 251
H + V HRD+KP N+L+D H ++L DFGS K++ G S + + Y +PE++
Sbjct: 192 HQLHYV-HRDIKPDNILMDMNGH-IRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQ 249
Query: 252 ---FGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIK 294
G Y D WS G + E+L G+ F E+ V+ +I+
Sbjct: 250 AMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 295
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 102/221 (46%), Gaps = 16/221 (7%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFST 142
+V+G G+FG V K T A+K + + K E R + +V+ C + T
Sbjct: 96 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFR--EERDVLVNGDCQWIT 153
Query: 143 T----SKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+DE L LVM+Y +L S ++P + Y ++ + IH +
Sbjct: 154 ALHYAFQDENHLYLVMDYYVGG--DLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH 211
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSA-KVLVKGEANISY-ICSRYYRAPELI----F 252
V HRD+KP N+L+D H ++L DFGS K+ G S + + Y +PE++
Sbjct: 212 YV-HRDIKPDNVLLDVNGH-IRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMED 269
Query: 253 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
G +Y D WS G + E+L G+ F E+ V+ +I+
Sbjct: 270 GMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 310
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 102/221 (46%), Gaps = 16/221 (7%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFST 142
+V+G G+FG V K T A+K + + K E R + +V+ C + T
Sbjct: 80 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFR--EERDVLVNGDCQWIT 137
Query: 143 T----SKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+DE L LVM+Y +L S ++P + Y ++ + IH +
Sbjct: 138 ALHYAFQDENHLYLVMDYYVGG--DLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH 195
Query: 199 GVCHRDVKPQNLLVDPLTHQVKLCDFGSA-KVLVKGEANISY-ICSRYYRAPELI----F 252
V HRD+KP N+L+D H ++L DFGS K+ G S + + Y +PE++
Sbjct: 196 YV-HRDIKPDNVLLDVNGH-IRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMED 253
Query: 253 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
G +Y D WS G + E+L G+ F E+ V+ +I+
Sbjct: 254 GMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIM 294
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 102/217 (47%), Gaps = 26/217 (11%)
Query: 73 PKQTISYMAERVVGTGSFGIVFQAKCLETGET---VAIKKV-----LQDRRYKNRELQLM 124
P + + ++RV+G G FG+V+ + ++ + AIK + +Q RE LM
Sbjct: 17 PHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLM 76
Query: 125 RLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKL-Y 183
R ++HPNV++L + L P + L + QR P + + +
Sbjct: 77 RGLNHPNVLALIGIMLPPEGLPHVLL-------PYMCHGDLLQFIRSPQRNPTVKDLISF 129
Query: 184 TYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR 243
Q+ RG+ Y+ V HRD+ +N ++D + VK+ DFG A+ ++ E S R
Sbjct: 130 GLQVARGMEYLAEQKFV-HRDLAARNCMLDE-SFTVKVADFGLARDILDRE-YYSVQQHR 186
Query: 244 YYRAPELIFGATE------YTTSIDIWSAGCVLAELL 274
+ R P + + A E +TT D+WS G +L ELL
Sbjct: 187 HARLP-VKWTALESLQTYRFTTKSDVWSFGVLLWELL 222
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 52/274 (18%)
Query: 85 VGTGSFGIVFQAKCL-----ETGETVAIKKVLQ-----DRRYKNRELQ-LMRLMDHPNVI 133
+G G+FG V +A T TVA+K + + + R EL+ L+ + H NV+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 134 SL---------------KHCFF---STTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
+L + C F ST + + + + PE +Y+ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF---------L 145
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
L ++ Y++Q+ +G+ ++ + + HRD+ +N+L+ + VK+CDFG A+ + K
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNILLSE-KNVVKICDFGLARDIXKDPD 203
Query: 236 NISYICSRY---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVE 291
+ +R + APE IF YT D+WS G +L E+ LG +PG V+
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VK 255
Query: 292 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 325
I + +E R P+YT Q WH
Sbjct: 256 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 289
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 52/274 (18%)
Query: 85 VGTGSFGIVFQAKCL-----ETGETVAIKKVLQ-----DRRYKNRELQ-LMRLMDHPNVI 133
+G G+FG V +A T TVA+K + + + R EL+ L+ + H NV+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 134 SL---------------KHCFF---STTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
+L + C F ST + + + + PE +Y+ +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF---------L 136
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
L ++ Y++Q+ +G+ ++ + + HRD+ +N+L+ + VK+CDFG A+ + K
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNILLSE-KNVVKICDFGLARDIXKDPD 194
Query: 236 NISYICSRY---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVE 291
+ +R + APE IF YT D+WS G +L E+ LG +PG V+
Sbjct: 195 XVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VK 246
Query: 292 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 325
I + +E R P+YT Q WH
Sbjct: 247 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 280
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 52/274 (18%)
Query: 85 VGTGSFGIVFQAKCL-----ETGETVAIKKVLQ-----DRRYKNRELQ-LMRLMDHPNVI 133
+G G+FG V +A T TVA+K + + + R EL+ L+ + H NV+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 134 SL---------------KHCFF---STTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
+L + C F ST + + + + PE +Y+ +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF---------L 136
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
L ++ Y++Q+ +G+ ++ + + HRD+ +N+L+ + VK+CDFG A+ + K
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNILLSE-KNVVKICDFGLARDIXKDPD 194
Query: 236 NISYICSRY---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVE 291
+ +R + APE IF YT D+WS G +L E+ LG +PG V+
Sbjct: 195 XVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VK 246
Query: 292 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 325
I + +E R P+YT Q WH
Sbjct: 247 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 280
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 52/274 (18%)
Query: 85 VGTGSFGIVFQAKCL-----ETGETVAIKKVLQ-----DRRYKNRELQ-LMRLMDHPNVI 133
+G G+FG V +A T TVA+K + + + R EL+ L+ + H NV+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 134 SL---------------KHCFF---STTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
+L + C F ST + + + + PE +Y+ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF---------L 145
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
L ++ Y++Q+ +G+ ++ + + HRD+ +N+L+ + VK+CDFG A+ + K
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNILLSE-KNVVKICDFGLARDIYKDPD 203
Query: 236 NISYICSRY---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVE 291
+ +R + APE IF YT D+WS G +L E+ LG +PG V+
Sbjct: 204 XVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VK 255
Query: 292 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 325
I + +E R P+YT Q WH
Sbjct: 256 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 289
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 120/275 (43%), Gaps = 55/275 (20%)
Query: 85 VGTGSFGIVFQAKCL-----ETGETVAIKKVLQ-----DRRYKNRELQ-LMRLMDHPNVI 133
+G G+FG V +A T TVA+K + + + R EL+ L+ + H NV+
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 134 SL---------------KHCFFSTTSKDELFLNLVMEYVP----ETMYRVLKHYSSMNQR 174
+L + C F S + E+VP E +Y+
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLST--YLRSKRNEFVPYKTPEDLYKDF--------- 144
Query: 175 MPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE 234
+ L ++ Y++Q+ +G+ ++ + + HRD+ +N+L+ + VK+CDFG A+ + K
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNILLSE-KNVVKICDFGLARDIXKDP 202
Query: 235 ANISYICSRY---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLV 290
+ +R + APE IF YT D+WS G +L E+ LG +PG V
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------V 254
Query: 291 EIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 325
+I + +E R P+YT Q WH
Sbjct: 255 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 289
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 118/289 (40%), Gaps = 75/289 (25%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHC 138
Y R +G G F V+ ++ VA+K V + Y L ++L+ ++
Sbjct: 33 YHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLK-----CVRES 87
Query: 139 FFSTTSKDELFLNLVMEYVPETM--------YRVLKHY------SSMNQRMPLIYVKLYT 184
S +KD + + L+ ++ M + VL H+ S Q +P+ VK
Sbjct: 88 DPSDPNKD-MVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPVRCVKSII 146
Query: 185 YQIFRGLAYIHTVPGVCHRDVKPQN----------------------------------- 209
Q+ +GL Y+H+ + H D+KP+N
Sbjct: 147 RQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAVST 206
Query: 210 -----LLVDPLTHQ------VKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYT 258
LLV+PL + VK+ D G+A + K I +R YR+ E++ GA Y+
Sbjct: 207 APAADLLVNPLDPRNADKIRVKIADLGNACWVHK--HFTEDIQTRQYRSIEVLIGAG-YS 263
Query: 259 TSIDIWSAGCVLAELLLGQPLF---PGENAV---DQLVEIIKVLGTPTR 301
T DIWS C+ EL G LF GE+ D + II++LG+ R
Sbjct: 264 TPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPR 312
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 52/274 (18%)
Query: 85 VGTGSFGIVFQAKCL-----ETGETVAIKKVLQ-----DRRYKNRELQ-LMRLMDHPNVI 133
+G G+FG V +A T TVA+K + + + R EL+ L+ + H NV+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 134 SL---------------KHCFF---STTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
+L + C F ST + + + + PE +Y+ +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF---------L 145
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
L ++ Y++Q+ +G+ ++ + + HRD+ +N+L+ + VK+CDFG A+ + K
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNILLSE-KNVVKICDFGLARDIYKDPD 203
Query: 236 NISYICSRY---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVE 291
+ +R + APE IF YT D+WS G +L E+ LG +PG V+
Sbjct: 204 YVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VK 255
Query: 292 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 325
I + +E R P+YT Q WH
Sbjct: 256 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 289
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 18/200 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV-----LQDRRYKNRELQLMRLMDHPNVISLKHCF 139
+G GSFG VF+ T + VAIK + + +E+ ++ D V +
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSY 90
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
+ L ++MEY+ L ++ +K +I +GL Y+H+
Sbjct: 91 LKGSK-----LWIIMEYLGGGSALDLLRAGPFDEFQIATMLK----EILKGLDYLHSEKK 141
Query: 200 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE-ANISYICSRYYRAPELIFGATEYT 258
+ HRD+K N+L+ VKL DFG A L + +++ + ++ APE+I + Y
Sbjct: 142 I-HRDIKAANVLLSE-QGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-QQSAYD 198
Query: 259 TSIDIWSAGCVLAELLLGQP 278
+ DIWS G EL G+P
Sbjct: 199 SKADIWSLGITAIELAKGEP 218
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 52/274 (18%)
Query: 85 VGTGSFGIVFQAKCL-----ETGETVAIKKVLQ-----DRRYKNRELQ-LMRLMDHPNVI 133
+G G+FG V +A T TVA+K + + + R EL+ L+ + H NV+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 134 SL---------------KHCFF---STTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
+L + C F ST + + + + PE +Y+ +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF---------L 136
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
L ++ Y++Q+ +G+ ++ + + HRD+ +N+L+ + VK+CDFG A+ + K
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNILLSE-KNVVKICDFGLARDIYKDPD 194
Query: 236 NISYICSRY---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVE 291
+ +R + APE IF YT D+WS G +L E+ LG +PG V+
Sbjct: 195 YVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VK 246
Query: 292 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 325
I + +E R P+YT Q WH
Sbjct: 247 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 280
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 19/199 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTS 144
+G GSFG V + + +TG A+KKV + ++ EL + P ++ L
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEV-FRAEELMACAGLTSPRIVPLY-----GAV 135
Query: 145 KDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHR 203
++ ++N+ ME + ++ +++K + + L Y+ Q GL Y+H+ + H
Sbjct: 136 REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLG----QALEGLEYLHSRR-ILHG 190
Query: 204 DVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY------YRAPELIFGATEY 257
DVK N+L+ LCDFG A L + Y + APE++ G +
Sbjct: 191 DVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRS-C 249
Query: 258 TTSIDIWSAGCVLAELLLG 276
+D+WS+ C++ +L G
Sbjct: 250 DAKVDVWSSCCMMLHMLNG 268
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 106/222 (47%), Gaps = 22/222 (9%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIK-----KVLQDRRYKNRELQLMRLMDHPNVI 133
++ ++G G+ VF+ + +TG+ AIK L+ + RE ++++ ++H N++
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
L TT++ ++ L+ME+ P ++Y VL+ S+ +P + + G+
Sbjct: 71 KLFAIEEETTTRHKV---LIMEFCPCGSLYTVLEEPSNA-YGLPESEFLIVLRDVVGGMN 126
Query: 193 YIHTVPGVCHRDVKPQNLL--VDPLTHQV-KLCDFGSAKVLVKGEANISYICSRYYRAPE 249
++ G+ HR++KP N++ + V KL DFG+A+ L E +S + Y P+
Sbjct: 127 HLRE-NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPD 185
Query: 250 LIFGAT-------EYTTSIDIWSAGCVLAELLLGQ-PLFPGE 283
+ A +Y ++D+WS G G P P E
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 52/274 (18%)
Query: 85 VGTGSFGIVFQAKCL-----ETGETVAIKKVLQ-----DRRYKNRELQ-LMRLMDHPNVI 133
+G G+FG V +A T TVA+K + + + R EL+ L+ + H NV+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 134 SL---------------KHCFF---STTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
+L + C F ST + + + + PE +Y+ +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF---------L 136
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
L ++ Y++Q+ +G+ ++ + + HRD+ +N+L+ + VK+CDFG A+ + K
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNILLSE-KNVVKICDFGLARDIYKDPD 194
Query: 236 NISYICSRY---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVE 291
+ +R + APE IF YT D+WS G +L E+ LG +PG V+
Sbjct: 195 YVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VK 246
Query: 292 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 325
I + +E R P+YT Q WH
Sbjct: 247 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 280
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 52/274 (18%)
Query: 85 VGTGSFGIVFQAKCL-----ETGETVAIKKVLQ-----DRRYKNRELQ-LMRLMDHPNVI 133
+G G+FG V +A T TVA+K + + + R EL+ L+ + H NV+
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 134 SL---------------KHCFF---STTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
+L + C F ST + + + + PE +Y+ +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF---------L 182
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
L ++ Y++Q+ +G+ ++ + + HRD+ +N+L+ + VK+CDFG A+ + K
Sbjct: 183 TLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNILLSE-KNVVKICDFGLARDIYKDPD 240
Query: 236 NISYICSRY---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVE 291
+ +R + APE IF YT D+WS G +L E+ LG +PG V+
Sbjct: 241 YVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VK 292
Query: 292 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 325
I + +E R P+YT Q WH
Sbjct: 293 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 326
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 52/274 (18%)
Query: 85 VGTGSFGIVFQAKCL-----ETGETVAIKKVLQ-----DRRYKNRELQ-LMRLMDHPNVI 133
+G G+FG V +A T TVA+K + + + R EL+ L+ + H NV+
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 134 SL---------------KHCFF---STTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRM 175
+L + C F ST + + + + PE +Y+ +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDF---------L 147
Query: 176 PLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA 235
L ++ Y++Q+ +G+ ++ + + HRD+ +N+L+ + VK+CDFG A+ + K
Sbjct: 148 TLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNILLSE-KNVVKICDFGLARDIYKDPD 205
Query: 236 NISYICSRY---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVE 291
+ +R + APE IF YT D+WS G +L E+ LG +PG V+
Sbjct: 206 YVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VK 257
Query: 292 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 325
I + +E R P+YT Q WH
Sbjct: 258 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 291
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 90/207 (43%), Gaps = 9/207 (4%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQD-RRYKNRELQLMRLMDHPNVISLKHCFFSTT 143
+G GS+G VF+ + E G A+K+ + R K+R +L + H V C
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQ 124
Query: 144 SKDE-LFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCH 202
+ +E L L E ++ +H + +P V Y LA++H+ G+ H
Sbjct: 125 AWEEGGILYLQTELCGPSLQ---QHCEAWGASLPEAQVWGYLRDTLLALAHLHS-QGLVH 180
Query: 203 RDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYTTSID 262
DVKP N+ + P + KL DFG L A Y APEL+ G+ Y T+ D
Sbjct: 181 LDVKPANIFLGP-RGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGS--YGTAAD 237
Query: 263 IWSAGCVLAELLLGQPLFPGENAVDQL 289
++S G + E+ L G QL
Sbjct: 238 VFSLGLTILEVACNMELPHGGEGWQQL 264
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 111/231 (48%), Gaps = 30/231 (12%)
Query: 71 GEPKQTIS---YMAERVVGTGSFGIVFQAKCLE-TGE--TVAIKKVLQDRRYKNRE---- 120
G P+ I+ + R++G G FG V++ GE VA+K +D N+E
Sbjct: 15 GSPQYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMS 74
Query: 121 -LQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQR-MPLI 178
+M+ +DHP+++ L +E ++ME P Y L HY N+ + ++
Sbjct: 75 EAVIMKNLDHPHIVKLIGII------EEEPTWIIMELYP---YGELGHYLERNKNSLKVL 125
Query: 179 YVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+ LY+ QI + +AY+ ++ V HRD+ +N+LV VKL DFG ++ ++ E
Sbjct: 126 TLVLYSLQICKAMAYLESINCV-HRDIAVRNILVAS-PECVKLGDFGLSR-YIEDEDYYK 182
Query: 239 YICSRY---YRAPELIFGATEYTTSIDIWSAGCVLAELLL--GQPLFPGEN 284
+R + +PE I +TT+ D+W + E+L QP F EN
Sbjct: 183 ASVTRLPIKWMSPESI-NFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN 232
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 95/212 (44%), Gaps = 19/212 (8%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV-LQDRRYKNRELQ-------LMRLMDHPNVISLK 136
+G GSF V+ K L+T TV + LQDR+ E Q ++ + HPN++
Sbjct: 34 IGRGSFKTVY--KGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFY 91
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHT 196
+ ST + + + T+ LK + ++ ++ + QI +GL ++HT
Sbjct: 92 DSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKV----LRSWCRQILKGLQFLHT 147
Query: 197 -VPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGAT 255
P + HRD+K N+ + T VK+ D G A L + + I + + APE
Sbjct: 148 RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA-TLKRASFAKAVIGTPEFXAPEXY--EE 204
Query: 256 EYTTSIDIWSAG-CVLAELLLGQPLFPGENAV 286
+Y S+D+++ G C L P +NA
Sbjct: 205 KYDESVDVYAFGXCXLEXATSEYPYSECQNAA 236
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 34/244 (13%)
Query: 88 GSFGIVFQAKCLETGETVAIKKVLQDRRYKNRE-----LQLMRLMDHPNVISLKHCFFST 142
G FG V++A+ ET +A KV+ + + E + ++ DHPN++ L F+
Sbjct: 21 GDFGKVYKAQNKETS-VLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYE 79
Query: 143 TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLI--YVKLYTYQIFRGLAYIHTVPGV 200
+ L +++E+ + + PL +++ Q L Y+H +
Sbjct: 80 NN-----LWILIEFCAGGAVDAV----MLELERPLTESQIQVVCKQTLDALNYLHD-NKI 129
Query: 201 CHRDVKPQNLLVDPLTHQVKLCDFG-SAK-VLVKGEANISYICSRYYRAPELIFGATE-- 256
HRD+K N+L L +KL DFG SAK + S+I + Y+ APE++ T
Sbjct: 130 IHRDLKAGNILF-TLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKD 188
Query: 257 --YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIK----VLGTPTREEIRCMNPN 310
Y D+WS G L E+ +P N + L++I K L P+R + N
Sbjct: 189 RPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSR-----WSSN 243
Query: 311 YTDF 314
+ DF
Sbjct: 244 FKDF 247
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 106/216 (49%), Gaps = 27/216 (12%)
Query: 83 RVVGTGSFGIVFQAKCLE-TGE--TVAIKKVLQDRRYKNRE-----LQLMRLMDHPNVIS 134
R++G G FG V++ GE VA+K +D N+E +M+ +DHP+++
Sbjct: 14 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 73
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQR-MPLIYVKLYTYQIFRGLAY 193
L ++ + ++ME P Y L HY N+ + ++ + LY+ QI + +AY
Sbjct: 74 L----IGIIEEEPTW--IIMELYP---YGELGHYLERNKNSLKVLTLVLYSLQICKAMAY 124
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPEL 250
+ ++ V HRD+ +N+LV VKL DFG ++ ++ E +R + +PE
Sbjct: 125 LESINCV-HRDIAVRNILVAS-PECVKLGDFGLSR-YIEDEDYYKASVTRLPIKWMSPES 181
Query: 251 IFGATEYTTSIDIWSAGCVLAELLL--GQPLFPGEN 284
I +TT+ D+W + E+L QP F EN
Sbjct: 182 I-NFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN 216
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 27/216 (12%)
Query: 83 RVVGTGSFGIVFQAKCLE-TGE--TVAIKKVLQDRRYKNRE-----LQLMRLMDHPNVIS 134
R++G G FG V++ GE VA+K +D N+E +M+ +DHP+++
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 77
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQR-MPLIYVKLYTYQIFRGLAY 193
L +E ++ME P Y L HY N+ + ++ + LY+ QI + +AY
Sbjct: 78 LIGII------EEEPTWIIMELYP---YGELGHYLERNKNSLKVLTLVLYSLQICKAMAY 128
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE---ANISYICSRYYRAPEL 250
+ ++ V HRD+ +N+LV VKL DFG ++ + + A+++ + + + +PE
Sbjct: 129 LESINCV-HRDIAVRNILVAS-PECVKLGDFGLSRYIEDEDYYKASVTRLPIK-WMSPES 185
Query: 251 IFGATEYTTSIDIWSAGCVLAELLL--GQPLFPGEN 284
I +TT+ D+W + E+L QP F EN
Sbjct: 186 I-NFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN 220
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 122/293 (41%), Gaps = 37/293 (12%)
Query: 80 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQL-MRLMDHPNVISLKHC 138
+ +V+G G G V Q T E A+K LQD RE++L R P+++ +
Sbjct: 65 VTSQVLGLGINGKVLQIFNKRTQEKFALK-XLQDCPKARREVELHWRASQCPHIVRIVDV 123
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA----YI 194
+ + + + L +V E + + +S + R + + +I + + Y+
Sbjct: 124 YENLYAGRKCLL-IVXECLDGG-----ELFSRIQDRGDQAFTEREASEIXKSIGEAIQYL 177
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANISYICSRYYRAPELIF 252
H++ + HRDVKP+NLL +KL DFG AK + + + YY APE +
Sbjct: 178 HSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPE-VL 235
Query: 253 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 312
G +Y S D WS G + LL G P F + + + + IR
Sbjct: 236 GPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGL--------AISPGXKTRIR-----XG 282
Query: 313 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 365
+ FP + W +V E L LL+ P+ R T E HP+ +
Sbjct: 283 QYEFPNPE---WSEVSE-----EVKXLIRNLLKTEPTQRXTITEFXNHPWIXQ 327
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 110/222 (49%), Gaps = 28/222 (12%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV-------LQDRRYKNRELQLMRLMDHPNVISLKH 137
+G+GSFG V++ K G+ VA+K + Q + +KN E+ ++R H N++
Sbjct: 20 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 71
Query: 138 CFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHT 196
F ++K +L +V ++ ++Y L + + LI + Q RG+ Y+H
Sbjct: 72 LFMGYSTKPQL--AIVTQWCEGSSLYHHLHASETKFEMKKLIDI---ARQTARGMDYLH- 125
Query: 197 VPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISY---ICSRYYRAPELIF- 252
+ HRD+K N+ + + VK+ DFG A V + + + S + APE+I
Sbjct: 126 AKSIIHRDLKSNNIFLHE-DNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 184
Query: 253 -GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+ Y+ D+++ G VL EL+ GQ + N DQ++E++
Sbjct: 185 QDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 226
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 125/305 (40%), Gaps = 61/305 (20%)
Query: 68 GKNGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR-------- 119
G +G+ Q Y + +G GS+G+V A E T KVL ++ +
Sbjct: 4 GSSGDCVQLNQYTLKDEIGKGSYGVVKLAYN-ENDNTYYAMKVLSKKKLIRQAGFPRRPP 62
Query: 120 -----------------------ELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEY 156
E+ +++ +DHPNV+ L ++D L++ V E
Sbjct: 63 PRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVL-DDPNEDHLYM--VFEL 119
Query: 157 V---PETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVD 213
V P LK S R Y + +G+ Y+H + HRD+KP NLLV
Sbjct: 120 VNQGPVMEVPTLKPLSEDQAR-------FYFQDLIKGIEYLH-YQKIIHRDIKPSNLLVG 171
Query: 214 PLTHQVKLCDFGSAKVLVKGEANIS-YICSRYYRAPELIFGATEYTT--SIDIWSAGCVL 270
H +K+ DFG + +A +S + + + APE + + + ++D+W+ G L
Sbjct: 172 EDGH-IKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
Query: 271 AELLLGQPLFPGENAVDQLVEI-IKVLGTPTREEI---------RCMNPN-YTDFRFPQI 319
+ GQ F E + +I + L P + +I R ++ N + P+I
Sbjct: 231 YCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEI 290
Query: 320 KAHPW 324
K HPW
Sbjct: 291 KLHPW 295
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 110/246 (44%), Gaps = 21/246 (8%)
Query: 80 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN------RELQLMRLMDH-PNV 132
+ + +G G F +V Q TG+ A K + + RR ++ E+ ++ L P V
Sbjct: 32 LTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRV 91
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRG 190
I+L H + TS+ + L++EY E L + M +I + QI G
Sbjct: 92 INL-HEVYENTSE----IILILEYAAGGEIFSLCLPELAEMVSENDVIRL---IKQILEG 143
Query: 191 LAYIHTVPGVCHRDVKPQNLLVDPL--THQVKLCDFGSAKVLVKGEANISYICSRYYRAP 248
+ Y+H + H D+KPQN+L+ + +K+ DFG ++ + + + Y AP
Sbjct: 144 VYYLHQ-NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAP 202
Query: 249 ELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN 308
E I TT+ D+W+ G + LL F GE+ + + I +V + E ++
Sbjct: 203 E-ILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVS 261
Query: 309 PNYTDF 314
TDF
Sbjct: 262 QLATDF 267
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM---------DHPNVISL 135
+G G FG+VF+AK AIK++ R NREL ++M +HP ++
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRI----RLPNRELAREKVMREVKALAKLEHPGIVRY 68
Query: 136 KHCFFSTTSKDEL-------FLNLVMEYV-PETMYRVLKHYSSMNQRMPLIYVKLYTYQI 187
+ + + ++L +L + M+ E + + ++ +R + + ++ QI
Sbjct: 69 FNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF-LQI 127
Query: 188 FRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA------------ 235
+ ++H+ G+ HRD+KP N+ + VK+ DFG + + E
Sbjct: 128 AEAVEFLHS-KGLMHRDLKPSNIFFT-MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185
Query: 236 -NISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL 274
+ + ++ Y +PE I G + Y+ +DI+S G +L ELL
Sbjct: 186 RHTGQVGTKLYMSPEQIHGNS-YSHKVDIFSLGLILFELL 224
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 105/222 (47%), Gaps = 22/222 (9%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIK-----KVLQDRRYKNRELQLMRLMDHPNVI 133
++ ++G G+ VF+ + +TG+ AIK L+ + RE ++++ ++H N++
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
L TT++ ++ L+ME+ P ++Y VL+ S+ +P + + G+
Sbjct: 71 KLFAIEEETTTRHKV---LIMEFCPCGSLYTVLEEPSNA-YGLPESEFLIVLRDVVGGMN 126
Query: 193 YIHTVPGVCHRDVKPQNLL--VDPLTHQV-KLCDFGSAKVLVKGEANISYICSRYYRAPE 249
++ G+ HR++KP N++ + V KL DFG+A+ L E + + Y P+
Sbjct: 127 HLRE-NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPD 185
Query: 250 LIFGAT-------EYTTSIDIWSAGCVLAELLLGQ-PLFPGE 283
+ A +Y ++D+WS G G P P E
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 23/175 (13%)
Query: 155 EYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDP 214
E PE +Y+ + L ++ Y++Q+ +G+ ++ + + HRD+ +N+L+
Sbjct: 186 EEAPEDLYKDF---------LTLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNILLSE 235
Query: 215 LTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPELIFGATEYTTSIDIWSAGCVLA 271
+ VK+CDFG A+ + K + +R + APE IF YT D+WS G +L
Sbjct: 236 -KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLW 293
Query: 272 ELL-LGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 325
E+ LG +PG V+I + +E R P+YT Q WH
Sbjct: 294 EIFSLGASPYPG-------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 341
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 23/175 (13%)
Query: 155 EYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDP 214
E PE +Y+ + L ++ Y++Q+ +G+ ++ + + HRD+ +N+L+
Sbjct: 184 EEAPEDLYKDF---------LTLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNILLSE 233
Query: 215 LTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPELIFGATEYTTSIDIWSAGCVLA 271
+ VK+CDFG A+ + K + +R + APE IF YT D+WS G +L
Sbjct: 234 -KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLW 291
Query: 272 ELL-LGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 325
E+ LG +PG V+I + +E R P+YT Q WH
Sbjct: 292 EIFSLGASPYPG-------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 339
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 23/175 (13%)
Query: 155 EYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDP 214
E PE +Y+ + L ++ Y++Q+ +G+ ++ + + HRD+ +N+L+
Sbjct: 177 EEAPEDLYKDF---------LTLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNILLSE 226
Query: 215 LTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPELIFGATEYTTSIDIWSAGCVLA 271
+ VK+CDFG A+ + K + +R + APE IF YT D+WS G +L
Sbjct: 227 -KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLW 284
Query: 272 ELL-LGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 325
E+ LG +PG V+I + +E R P+YT Q WH
Sbjct: 285 EIFSLGASPYPG-------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 332
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 23/175 (13%)
Query: 155 EYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDP 214
E PE +Y+ + L ++ Y++Q+ +G+ ++ + + HRD+ +N+L+
Sbjct: 179 EEAPEDLYKDF---------LTLEHLICYSFQVAKGMEFLASRKCI-HRDLAARNILLSE 228
Query: 215 LTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPELIFGATEYTTSIDIWSAGCVLA 271
+ VK+CDFG A+ + K + +R + APE IF YT D+WS G +L
Sbjct: 229 -KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLW 286
Query: 272 ELL-LGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWH 325
E+ LG +PG V+I + +E R P+YT Q WH
Sbjct: 287 EIFSLGASPYPG-------VKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWH 334
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 27/206 (13%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIK---KVLQDRRYKNRELQ------LMRLMDHPNVI 133
+V+G+G+FG V++ + GETV I K+L + ++ +M MDHP+++
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPE--TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGL 191
L S T + LV + +P + V +H ++ ++ L + QI +G+
Sbjct: 104 RLLGVCLSPT------IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLN----WCVQIAKGM 153
Query: 192 AYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAP 248
Y+ + HRD+ +N+LV H VK+ DFG A++L E + + + A
Sbjct: 154 MYLEE-RRLVHRDLAARNVLVKSPNH-VKITDFGLARLLEGDEKEYNADGGKMPIKWMAL 211
Query: 249 ELIFGATEYTTSIDIWSAGCVLAELL 274
E I ++T D+WS G + EL+
Sbjct: 212 ECIH-YRKFTHQSDVWSYGVTIWELM 236
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 5/145 (3%)
Query: 183 YTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICS 242
+ +Q+ + + H GV HRD+K +N+L+D ++KL DFGS L+K + +
Sbjct: 162 FFWQVLEAVRHCHNC-GVLHRDIKDENILIDLNRGELKLIDFGSG-ALLKDTVYTDFDGT 219
Query: 243 RYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ-PLFPGENAVDQLVEIIKVLGTPTR 301
R Y PE I + S +WS G +L +++ G P E + V + + + +
Sbjct: 220 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQ 279
Query: 302 EEIR-CMNPNYTDF-RFPQIKAHPW 324
IR C+ +D F +I+ HPW
Sbjct: 280 HLIRWCLALRPSDRPTFEEIQNHPW 304
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 27/206 (13%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIK---KVLQDRRYKNRELQ------LMRLMDHPNVI 133
+V+G+G+FG V++ + GETV I K+L + ++ +M MDHP+++
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPE--TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGL 191
L S T + LV + +P + V +H ++ ++ L + QI +G+
Sbjct: 81 RLLGVCLSPT------IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLN----WCVQIAKGM 130
Query: 192 AYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAP 248
Y+ + HRD+ +N+LV H VK+ DFG A++L E + + + A
Sbjct: 131 MYLEE-RRLVHRDLAARNVLVKSPNH-VKITDFGLARLLEGDEKEYNADGGKMPIKWMAL 188
Query: 249 ELIFGATEYTTSIDIWSAGCVLAELL 274
E I ++T D+WS G + EL+
Sbjct: 189 ECIH-YRKFTHQSDVWSYGVTIWELM 213
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 109/222 (49%), Gaps = 28/222 (12%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV-------LQDRRYKNRELQLMRLMDHPNVISLKH 137
+G+GSFG V++ K G+ VA+K + Q + +KN E+ ++R H N++
Sbjct: 32 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 83
Query: 138 CFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHT 196
F ++K +L +V ++ ++Y L + + LI + Q RG+ Y+H
Sbjct: 84 LFMGYSTKPQL--AIVTQWCEGSSLYHHLHASETKFEMKKLIDI---ARQTARGMDYLH- 137
Query: 197 VPGVCHRDVKPQNLLVDPLTHQVKLCDFGSA--KVLVKGEANISYIC-SRYYRAPELIF- 252
+ HRD+K N+ + + VK+ DFG A K G + S + APE+I
Sbjct: 138 AKSIIHRDLKSNNIFLHE-DNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 196
Query: 253 -GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+ Y+ D+++ G VL EL+ GQ + N DQ++E++
Sbjct: 197 QDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 114/250 (45%), Gaps = 31/250 (12%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN-RELQLMRLMDHPNVISLKHCFFST 142
++G G +G V++ E V + + + N + + + LM+H N+
Sbjct: 20 LIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERV 79
Query: 143 TSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHT------ 196
T+ + LVMEY P L Y S++ + +L + + RGLAY+HT
Sbjct: 80 TADGRMEYLLVMEYYPNG---SLXKYLSLHTSDWVSSCRL-AHSVTRGLAYLHTELPRGD 135
Query: 197 --VPGVCHRDVKPQNLLVDPLTHQVKLCDFG-----SAKVLVK-GE---ANISYICSRYY 245
P + HRD+ +N+LV V + DFG + LV+ GE A IS + + Y
Sbjct: 136 HYKPAISHRDLNSRNVLVKNDGTCV-ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRY 194
Query: 246 RAPELIFGATEYT------TSIDIWSAGCVLAELLLG-QPLFPGENAVD-QLVEIIKVLG 297
APE++ GA +D+++ G + E+ + LFPGE+ + Q+ +V
Sbjct: 195 MAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGN 254
Query: 298 TPTREEIRCM 307
PT E+++ +
Sbjct: 255 HPTFEDMQVL 264
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 121/268 (45%), Gaps = 44/268 (16%)
Query: 85 VGTGSFGIVFQAKCL-----ETGETVAIKKVLQ-----DRRYKNRELQ-LMRLMDHPNVI 133
+G G+FG V +A T TVA+K + + + R EL+ L+ + H NV+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHY--SSMNQRMP----------LIYVK 181
+L +K L +++E+ + L Y S N+ +P L ++
Sbjct: 95 NL----LGACTKPGGPLMVIVEFCK---FGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLI 147
Query: 182 LYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYIC 241
Y++Q+ +G+ ++ + + HRD+ +N+L+ + VK+ DFG A+ + K +
Sbjct: 148 XYSFQVAKGMEFLASRKXI-HRDLAARNILLSE-KNVVKIXDFGLARDIYKDPDYVRKGD 205
Query: 242 SRY---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKVLG 297
+R + APE IF YT D+WS G +L E+ LG +PG V+I +
Sbjct: 206 ARLPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPG-------VKIDEEFX 257
Query: 298 TPTREEIRCMNPNYTDFRFPQIKAHPWH 325
+E R P+YT Q WH
Sbjct: 258 RRLKEGTRMRAPDYTTPEMYQTMLDCWH 285
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 104/221 (47%), Gaps = 38/221 (17%)
Query: 82 ERVVGTGSFGIVFQAKCLETGETVAIKK-VLQDRRYK----------NRELQLMRLMDHP 130
E+ +G G FG+V + + ++ VAIK +L D + RE+ +M ++HP
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIY-VKL-YTYQ 186
N++ L + +VME+VP + +R+L ++ P+ + VKL
Sbjct: 84 NIVKLYGLMHNPP-------RMVMEFVPCGDLYHRLL------DKAHPIKWSVKLRLMLD 130
Query: 187 IFRGLAYIHTV-PGVCHRDVKPQNLLVDPLTHQVKLC----DFGSAKVLVKGEANISYIC 241
I G+ Y+ P + HRD++ N+ + L +C DFG+++ V + + +
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGL--LG 188
Query: 242 SRYYRAPELIFGATE--YTTSIDIWSAGCVLAELLLGQPLF 280
+ + APE I GA E YT D +S +L +L G+ F
Sbjct: 189 NFQWMAPETI-GAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 27/206 (13%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGL 191
L ++T + L+M+ +P + V +H ++ + Y+ + QI +G+
Sbjct: 82 RLLGICLTST------VQLIMQLMPFGXLLDYVREHKDNIGSQ----YLLNWCVQIAKGM 131
Query: 192 AYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAP 248
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 132 NYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 189
Query: 249 ELIFGATEYTTSIDIWSAGCVLAELL 274
E I YT D+WS G + EL+
Sbjct: 190 ESILHRI-YTHQSDVWSYGVTVWELM 214
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 26/207 (12%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVL--------QDRRYKNRELQLMRLMDHPNVISLK 136
+G G FG+V++ T TVA+KK+ + ++ ++E+++M H N++ L
Sbjct: 39 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL- 95
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIY-VKLYTYQ-IFRGLAYI 194
FS+ D L LV Y+P +L S ++ PL + ++ Q G+ ++
Sbjct: 96 -LGFSSDGDD---LCLVYVYMPNG--SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL 149
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI---SYICSRYYRAPELI 251
H + HRD+K N+L+D K+ DFG A+ K + + + Y APE +
Sbjct: 150 HENHHI-HRDIKSANILLDE-AFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEAL 207
Query: 252 FGATEYTTSIDIWSAGCVLAELLLGQP 278
G E T DI+S G VL E++ G P
Sbjct: 208 RG--EITPKSDIYSFGVVLLEIITGLP 232
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 26/207 (12%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVL--------QDRRYKNRELQLMRLMDHPNVISLK 136
+G G FG+V++ T TVA+KK+ + ++ ++E+++M H N++ L
Sbjct: 39 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL- 95
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIY-VKLYTYQ-IFRGLAYI 194
FS+ D L LV Y+P +L S ++ PL + ++ Q G+ ++
Sbjct: 96 -LGFSSDGDD---LCLVYVYMPNG--SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL 149
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI---SYICSRYYRAPELI 251
H + HRD+K N+L+D K+ DFG A+ K + + + Y APE +
Sbjct: 150 HENHHI-HRDIKSANILLDE-AFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL 207
Query: 252 FGATEYTTSIDIWSAGCVLAELLLGQP 278
G E T DI+S G VL E++ G P
Sbjct: 208 RG--EITPKSDIYSFGVVLLEIITGLP 232
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 21/216 (9%)
Query: 70 NGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNR--ELQ 122
+P ++ RV+G G FG VF + TG+ A KK+ + R Y+ E +
Sbjct: 178 EAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKK 237
Query: 123 LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIY--- 179
++ + ++SL + F + T L LVM + R H ++++ P
Sbjct: 238 ILAKVHSRFIVSLAYAFETKTD-----LCLVMTIMNGGDIRY--HIYNVDEDNPGFQEPR 290
Query: 180 VKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI-S 238
YT QI GL ++H + +RD+KP+N+L+D V++ D G A L G+
Sbjct: 291 AIFYTAQIVSGLEHLHQ-RNIIYRDLKPENVLLDD-DGNVRISDLGLAVELKAGQTKTKG 348
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL 274
Y + + APEL+ G EY S+D ++ G L E++
Sbjct: 349 YAGTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMI 383
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 21/216 (9%)
Query: 70 NGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNR--ELQ 122
+P ++ RV+G G FG VF + TG+ A KK+ + R Y+ E +
Sbjct: 178 EAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKK 237
Query: 123 LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIY--- 179
++ + ++SL + F + T L LVM + R H ++++ P
Sbjct: 238 ILAKVHSRFIVSLAYAFETKTD-----LCLVMTIMNGGDIRY--HIYNVDEDNPGFQEPR 290
Query: 180 VKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI-S 238
YT QI GL ++H + +RD+KP+N+L+D V++ D G A L G+
Sbjct: 291 AIFYTAQIVSGLEHLHQ-RNIIYRDLKPENVLLDD-DGNVRISDLGLAVELKAGQTKTKG 348
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL 274
Y + + APEL+ G EY S+D ++ G L E++
Sbjct: 349 YAGTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMI 383
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 21/216 (9%)
Query: 70 NGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNR--ELQ 122
+P ++ RV+G G FG VF + TG+ A KK+ + R Y+ E +
Sbjct: 178 EAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKK 237
Query: 123 LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIY--- 179
++ + ++SL + F + T L LVM + R H ++++ P
Sbjct: 238 ILAKVHSRFIVSLAYAFETKTD-----LCLVMTIMNGGDIRY--HIYNVDEDNPGFQEPR 290
Query: 180 VKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI-S 238
YT QI GL ++H + +RD+KP+N+L+D V++ D G A L G+
Sbjct: 291 AIFYTAQIVSGLEHLHQ-RNIIYRDLKPENVLLDD-DGNVRISDLGLAVELKAGQTKTKG 348
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL 274
Y + + APEL+ G EY S+D ++ G L E++
Sbjct: 349 YAGTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMI 383
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 108/222 (48%), Gaps = 28/222 (12%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV-------LQDRRYKNRELQLMRLMDHPNVISLKH 137
+G+GSFG V++ K G+ VA+K + Q + +KN E+ ++R H N+ L
Sbjct: 32 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNI--LLF 85
Query: 138 CFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHT 196
+ST + L +V ++ ++Y L + + LI + Q RG+ Y+H
Sbjct: 86 MGYSTAPQ----LAIVTQWCEGSSLYHHLHASETKFEMKKLIDI---ARQTARGMDYLH- 137
Query: 197 VPGVCHRDVKPQNLLVDPLTHQVKLCDFGSA--KVLVKGEANISYIC-SRYYRAPELIF- 252
+ HRD+K N+ + + VK+ DFG A K G + S + APE+I
Sbjct: 138 AKSIIHRDLKSNNIFLHE-DNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 196
Query: 253 -GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+ Y+ D+++ G VL EL+ GQ + N DQ++E++
Sbjct: 197 QDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 23/204 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L ++T + L+M+ +P +L + + Y+ + QI +G+ Y
Sbjct: 83 RLLGICLTST------VQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPEL 250
+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 135 LED-RRLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 251 IFGATEYTTSIDIWSAGCVLAELL 274
I YT D+WS G + EL+
Sbjct: 193 ILHRI-YTHQSDVWSYGVTVWELM 215
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 23/204 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L ++T + L+M+ +P +L + + Y+ + QI +G+ Y
Sbjct: 83 RLLGICLTST------VQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPEL 250
+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 135 LED-RRLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 251 IFGATEYTTSIDIWSAGCVLAELL 274
I YT D+WS G + EL+
Sbjct: 193 ILHRI-YTHQSDVWSYGVTVWELM 215
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 21/216 (9%)
Query: 70 NGEPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNR--ELQ 122
+P ++ RV+G G FG VF + TG+ A KK+ + R Y+ E +
Sbjct: 178 EAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKK 237
Query: 123 LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIY--- 179
++ + ++SL + F + T L LVM + R H ++++ P
Sbjct: 238 ILAKVHSRFIVSLAYAFETKTD-----LCLVMTIMNGGDIRY--HIYNVDEDNPGFQEPR 290
Query: 180 VKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI-S 238
YT QI GL ++H + +RD+KP+N+L+D V++ D G A L G+
Sbjct: 291 AIFYTAQIVSGLEHLHQ-RNIIYRDLKPENVLLDD-DGNVRISDLGLAVELKAGQTKTKG 348
Query: 239 YICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL 274
Y + + APEL+ G EY S+D ++ G L E++
Sbjct: 349 YAGTPGFMAPELLLG-EEYDFSVDYFALGVTLYEMI 383
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 23/204 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L ++T + L+M+ +P +L + + Y+ + QI +G+ Y
Sbjct: 85 RLLGICLTST------VQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPEL 250
+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 137 LED-RRLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 194
Query: 251 IFGATEYTTSIDIWSAGCVLAELL 274
I YT D+WS G + EL+
Sbjct: 195 ILHRI-YTHQSDVWSYGVTVWELM 217
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 26/207 (12%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVL--------QDRRYKNRELQLMRLMDHPNVISLK 136
+G G FG+V++ T TVA+KK+ + ++ ++E+++M H N++ L
Sbjct: 33 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL- 89
Query: 137 HCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIY-VKLYTYQ-IFRGLAYI 194
FS+ D L LV Y+P +L S ++ PL + ++ Q G+ ++
Sbjct: 90 -LGFSSDGDD---LCLVYVYMPNG--SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFL 143
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI---SYICSRYYRAPELI 251
H + HRD+K N+L+D K+ DFG A+ K + + + Y APE +
Sbjct: 144 HENHHI-HRDIKSANILLDE-AFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEAL 201
Query: 252 FGATEYTTSIDIWSAGCVLAELLLGQP 278
G E T DI+S G VL E++ G P
Sbjct: 202 RG--EITPKSDIYSFGVVLLEIITGLP 226
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 108/221 (48%), Gaps = 26/221 (11%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVL-----QDRRYKNRELQLMRLMDHPNVISLKHCF 139
+G+GSFG V++ K V I KV+ Q + ++N E+ ++R H N++ F
Sbjct: 44 IGSGSFGTVYKGKW-HGDVAVKILKVVDPTPEQFQAFRN-EVAVLRKTRHVNIL----LF 97
Query: 140 FSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVP 198
+KD L +V ++ ++Y+ L + Q LI + T Q G+ Y+H
Sbjct: 98 MGYMTKDNL--AIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQ---GMDYLHA-K 151
Query: 199 GVCHRDVKPQNLLV-DPLTHQVKLCDFGSAKVLVK--GEANISY-ICSRYYRAPELIFGA 254
+ HRD+K N+ + + LT VK+ DFG A V + G + S + APE+I
Sbjct: 152 NIIHRDMKSNNIFLHEGLT--VKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQ 209
Query: 255 TE--YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
++ D++S G VL EL+ G+ + N DQ++ ++
Sbjct: 210 DNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMV 250
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 27/206 (13%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPE--TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGL 191
L ++T + L+M+ +P + V +H ++ + Y+ + QI +G+
Sbjct: 85 RLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQ----YLLNWCVQIAKGM 134
Query: 192 AYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAP 248
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 135 NYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 192
Query: 249 ELIFGATEYTTSIDIWSAGCVLAELL 274
E I YT D+WS G + EL+
Sbjct: 193 ESILHRI-YTHQSDVWSYGVTVWELM 217
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 38/221 (17%)
Query: 82 ERVVGTGSFGIVFQAKCLETGETVAIKK-VLQDRRYK----------NRELQLMRLMDHP 130
E+ +G G FG+V + + ++ VAIK +L D + RE+ +M ++HP
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIY-VKL-YTYQ 186
N++ L + +VME+VP + +R+L ++ P+ + VKL
Sbjct: 84 NIVKLYGLMHNPP-------RMVMEFVPCGDLYHRLL------DKAHPIKWSVKLRLMLD 130
Query: 187 IFRGLAYIHTV-PGVCHRDVKPQNLLVDPLTHQVKLC----DFGSAKVLVKGEANISYIC 241
I G+ Y+ P + HRD++ N+ + L +C DFG ++ V + + +
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGL--LG 188
Query: 242 SRYYRAPELIFGATE--YTTSIDIWSAGCVLAELLLGQPLF 280
+ + APE I GA E YT D +S +L +L G+ F
Sbjct: 189 NFQWMAPETI-GAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 23/204 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L ++T + L+M+ +P +L + + Y+ + QI +G+ Y
Sbjct: 83 RLLGICLTST------VQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPEL 250
+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 135 LED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 251 IFGATEYTTSIDIWSAGCVLAELL 274
I YT D+WS G + EL+
Sbjct: 193 ILHRI-YTHQSDVWSYGVTVWELM 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 23/204 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L ++T + L+M+ +P +L + + Y+ + QI +G+ Y
Sbjct: 81 RLLGICLTST------VQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPEL 250
+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 133 LED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 251 IFGATEYTTSIDIWSAGCVLAELL 274
I YT D+WS G + EL+
Sbjct: 191 ILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 23/204 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L ++T + L+M+ +P +L + + Y+ + QI +G+ Y
Sbjct: 84 RLLGICLTST------VQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPEL 250
+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 136 LED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 251 IFGATEYTTSIDIWSAGCVLAELL 274
I YT D+WS G + EL+
Sbjct: 194 ILHRI-YTHQSDVWSYGVTVWELM 216
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 23/204 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L ++T + L+M+ +P +L + + Y+ + QI +G+ Y
Sbjct: 82 RLLGICLTST------VQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPEL 250
+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 134 LED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 191
Query: 251 IFGATEYTTSIDIWSAGCVLAELL 274
I YT D+WS G + EL+
Sbjct: 192 ILHRI-YTHQSDVWSYGVTVWELM 214
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 112/223 (50%), Gaps = 30/223 (13%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV-------LQDRRYKNRELQLMRLMDHPNVISLKH 137
+G+GSFG V++ K G+ VA+K + Q + +KN E+ ++R H N++
Sbjct: 44 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 95
Query: 138 CFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHT 196
F ++K +L +V ++ ++Y L + + + LI + T Q G+ Y+H
Sbjct: 96 LFMGYSTKPQL--AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ---GMDYLHA 150
Query: 197 VPGVCHRDVKPQNLLV-DPLTHQVKLCDFGSAKVLVKGEANISY---ICSRYYRAPELIF 252
+ HRD+K N+ + + LT VK+ DFG A V + + + S + APE+I
Sbjct: 151 -KSIIHRDLKSNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 207
Query: 253 GATE--YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+ Y+ D+++ G VL EL+ GQ + N DQ++ ++
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 250
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 129/304 (42%), Gaps = 40/304 (13%)
Query: 72 EPKQ---TISY-MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM 127
EPK+ T Y ++++V+G G G V + TG+ A+K + + + +
Sbjct: 20 EPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQAS 79
Query: 128 DHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQI 187
P+++ + + + L ++ME + + +S + +R + + +I
Sbjct: 80 GGPHIVCILDVYENMHHGKRCLL-IIMECMEGG-----ELFSRIQERGDQAFTEREAAEI 133
Query: 188 FRGLA----YIHTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANISYIC 241
R + ++H+ + HRDVKP+NLL +KL DFG AK + A +
Sbjct: 134 MRDIGTAIQFLHS-HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN-ALQTPCY 191
Query: 242 SRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 301
+ YY APE + G +Y S D+WS G ++ LL G P F + + +
Sbjct: 192 TPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTG--------QAISPGMK 242
Query: 302 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHP 361
IR + FP + W +V +A L LL+ P+ R T + HP
Sbjct: 243 RRIR-----LGQYGFPNPE---WSEV-----SEDAKQLIRLLLKTDPTERLTITQFMNHP 289
Query: 362 FFDE 365
+ ++
Sbjct: 290 WINQ 293
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 112/223 (50%), Gaps = 30/223 (13%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV-------LQDRRYKNRELQLMRLMDHPNVISLKH 137
+G+GSFG V++ K G+ VA+K + Q + +KN E+ ++R H N++
Sbjct: 43 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 94
Query: 138 CFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHT 196
F ++K +L +V ++ ++Y L + + + LI + T Q G+ Y+H
Sbjct: 95 LFMGYSTKPQL--AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ---GMDYLHA 149
Query: 197 VPGVCHRDVKPQNLLV-DPLTHQVKLCDFGSAKVLVKGEANISY---ICSRYYRAPELIF 252
+ HRD+K N+ + + LT VK+ DFG A V + + + S + APE+I
Sbjct: 150 -KSIIHRDLKSNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 206
Query: 253 GATE--YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+ Y+ D+++ G VL EL+ GQ + N DQ++ ++
Sbjct: 207 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 249
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 129/304 (42%), Gaps = 40/304 (13%)
Query: 72 EPKQ---TISY-MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM 127
EPK+ T Y ++++V+G G G V + TG+ A+K + + + +
Sbjct: 1 EPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQAS 60
Query: 128 DHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQI 187
P+++ + + + L ++ME + + +S + +R + + +I
Sbjct: 61 GGPHIVCILDVYENMHHGKRCLL-IIMECMEGG-----ELFSRIQERGDQAFTEREAAEI 114
Query: 188 FRGLA----YIHTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANISYIC 241
R + ++H+ + HRDVKP+NLL +KL DFG AK + A +
Sbjct: 115 MRDIGTAIQFLHS-HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN-ALQTPCY 172
Query: 242 SRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTR 301
+ YY APE + G +Y S D+WS G ++ LL G P F + + +
Sbjct: 173 TPYYVAPE-VLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTG--------QAISPGMK 223
Query: 302 EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHP 361
IR + FP + W +V +A L LL+ P+ R T + HP
Sbjct: 224 RRIR-----LGQYGFPNPE---WSEV-----SEDAKQLIRLLLKTDPTERLTITQFMNHP 270
Query: 362 FFDE 365
+ ++
Sbjct: 271 WINQ 274
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 110/222 (49%), Gaps = 28/222 (12%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV-------LQDRRYKNRELQLMRLMDHPNVISLKH 137
+G+GSFG V++ K G+ VA+K + Q + +KN E+ ++R H N++
Sbjct: 18 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 69
Query: 138 CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV 197
F ++K +L +V ++ + + H + + +I + Q +G+ Y+H
Sbjct: 70 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA- 124
Query: 198 PGVCHRDVKPQNLLV-DPLTHQVKLCDFGSAKVLVKGEANISY---ICSRYYRAPELIFG 253
+ HRD+K N+ + + LT VK+ DFG A V + + + S + APE+I
Sbjct: 125 KSIIHRDLKSNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 182
Query: 254 ATE--YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+ Y+ D+++ G VL EL+ GQ + N DQ++ ++
Sbjct: 183 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 224
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 110/222 (49%), Gaps = 28/222 (12%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV-------LQDRRYKNRELQLMRLMDHPNVISLKH 137
+G+GSFG V++ K G+ VA+K + Q + +KN E+ ++R H N++
Sbjct: 21 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 72
Query: 138 CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV 197
F ++K +L +V ++ + + H + + +I + Q +G+ Y+H
Sbjct: 73 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA- 127
Query: 198 PGVCHRDVKPQNLLV-DPLTHQVKLCDFGSAKVLVKGEANISY---ICSRYYRAPELIFG 253
+ HRD+K N+ + + LT VK+ DFG A V + + + S + APE+I
Sbjct: 128 KSIIHRDLKSNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 185
Query: 254 ATE--YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+ Y+ D+++ G VL EL+ GQ + N DQ++ ++
Sbjct: 186 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 227
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 110/222 (49%), Gaps = 28/222 (12%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV-------LQDRRYKNRELQLMRLMDHPNVISLKH 137
+G+GSFG V++ K G+ VA+K + Q + +KN E+ ++R H N++
Sbjct: 21 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 72
Query: 138 CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV 197
F ++K +L +V ++ + + H + + +I + Q +G+ Y+H
Sbjct: 73 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA- 127
Query: 198 PGVCHRDVKPQNLLV-DPLTHQVKLCDFGSAKVLVKGEANISY---ICSRYYRAPELIFG 253
+ HRD+K N+ + + LT VK+ DFG A V + + + S + APE+I
Sbjct: 128 KSIIHRDLKSNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 185
Query: 254 ATE--YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+ Y+ D+++ G VL EL+ GQ + N DQ++ ++
Sbjct: 186 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 227
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 103/207 (49%), Gaps = 29/207 (14%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIK---KVLQDRRYKNR------ELQLMRLMDHPNVI 133
+V+G+G FG V + + GE++ I KV++D+ + + + +DH +++
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGL 191
L ++ L LV +Y+P + V +H ++ ++ L + QI +G+
Sbjct: 97 RLLGLCPGSS------LQLVTQYLPLGSLLDHVRQHRGALGPQLLLN----WGVQIAKGM 146
Query: 192 AYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAP 248
Y+ G+ HR++ +N+L+ + QV++ DFG A +L + + Y ++ + A
Sbjct: 147 YYLEE-HGMVHRNLAARNVLLKSPS-QVQVADFGVADLLPPDDKQLLYSEAKTPIKWMAL 204
Query: 249 ELI-FGATEYTTSIDIWSAGCVLAELL 274
E I FG +YT D+WS G + EL+
Sbjct: 205 ESIHFG--KYTHQSDVWSYGVTVWELM 229
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 115/248 (46%), Gaps = 51/248 (20%)
Query: 73 PKQTISYMAERVVGTGSFGIVFQAKCLETGET-----VAIKKVLQDRRYKNRE-----LQ 122
P++ + + +V+G+G+FG V A +T VA+K + + RE L+
Sbjct: 43 PRENLEF--GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELK 100
Query: 123 LM-RLMDHPNVISL--------------KHCFFSTT-----SKDELFLNLVMEYVPETMY 162
+M +L H N+++L ++C + SK E F +EY +
Sbjct: 101 MMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQ--- 157
Query: 163 RVLKHYSSMNQRMPLIYVKL--YTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQ-- 218
+ L+ +N L + L + YQ+ +G+ ++ V HRD+ +N+LV TH
Sbjct: 158 KRLEEEEDLN---VLTFEDLLCFAYQVAKGMEFLEFKSCV-HRDLAARNVLV---THGKV 210
Query: 219 VKLCDFGSAKVLVKGEANISYICSRY---YRAPELIFGATEYTTSIDIWSAGCVLAELL- 274
VK+CDFG A+ ++ + +R + APE +F YT D+WS G +L E+
Sbjct: 211 VKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI-YTIKSDVWSYGILLWEIFS 269
Query: 275 LGQPLFPG 282
LG +PG
Sbjct: 270 LGVNPYPG 277
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 110/222 (49%), Gaps = 28/222 (12%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV-------LQDRRYKNRELQLMRLMDHPNVISLKH 137
+G+GSFG V++ K G+ VA+K + Q + +KN E+ ++R H N++
Sbjct: 16 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 67
Query: 138 CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV 197
F ++K +L +V ++ + + H + + +I + Q +G+ Y+H
Sbjct: 68 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA- 122
Query: 198 PGVCHRDVKPQNLLV-DPLTHQVKLCDFGSAKVLVKGEANISY---ICSRYYRAPELIFG 253
+ HRD+K N+ + + LT VK+ DFG A V + + + S + APE+I
Sbjct: 123 KSIIHRDLKSNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 180
Query: 254 ATE--YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+ Y+ D+++ G VL EL+ GQ + N DQ++ ++
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 103/207 (49%), Gaps = 29/207 (14%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIK---KVLQDRRYKNR------ELQLMRLMDHPNVI 133
+V+G+G FG V + + GE++ I KV++D+ + + + +DH +++
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGL 191
L ++ L LV +Y+P + V +H ++ ++ L + QI +G+
Sbjct: 79 RLLGLCPGSS------LQLVTQYLPLGSLLDHVRQHRGALGPQLLLN----WGVQIAKGM 128
Query: 192 AYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAP 248
Y+ G+ HR++ +N+L+ + QV++ DFG A +L + + Y ++ + A
Sbjct: 129 YYLEE-HGMVHRNLAARNVLLKSPS-QVQVADFGVADLLPPDDKQLLYSEAKTPIKWMAL 186
Query: 249 ELI-FGATEYTTSIDIWSAGCVLAELL 274
E I FG +YT D+WS G + EL+
Sbjct: 187 ESIHFG--KYTHQSDVWSYGVTVWELM 211
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 89/215 (41%), Gaps = 27/215 (12%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKV----------LQDRRYKNRELQLMRLMD 128
Y ++G G FG VF L VAIK + L D E+ L+ +
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVG 92
Query: 129 ----HPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIY--VKL 182
HP VI L F E F+ ++ +P + + ++ PL +
Sbjct: 93 AGGGHPGVIRLLDWF----ETQEGFMLVLERPLPAQ-----DLFDYITEKGPLGEGPSRC 143
Query: 183 YTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICS 242
+ Q+ + + H+ GV HRD+K +N+L+D KL DFGS L+ E + +
Sbjct: 144 FFGQVVAAIQHCHSR-GVVHRDIKDENILIDLRRGCAKLIDFGSG-ALLHDEPYTDFDGT 201
Query: 243 RYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQ 277
R Y PE I + +WS G +L +++ G
Sbjct: 202 RVYSPPEWISRHQYHALPATVWSLGILLYDMVCGD 236
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 27/206 (13%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGL 191
L ++T + L+ + +P + V +H ++ + Y+ + QI +G+
Sbjct: 81 RLLGICLTST------VQLITQLMPFGXLLDYVREHKDNIGSQ----YLLNWCVQIAKGM 130
Query: 192 AYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAP 248
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 131 NYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 249 ELIFGATEYTTSIDIWSAGCVLAELL 274
E I YT D+WS G + EL+
Sbjct: 189 ESILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L ++T + L+ + +P +L + + Y+ + QI +G+ Y
Sbjct: 83 RLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPEL 250
+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 135 LED-RRLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 251 IFGATEYTTSIDIWSAGCVLAELL 274
I YT D+WS G + EL+
Sbjct: 193 ILHRI-YTHQSDVWSYGVTVWELM 215
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L ++T + L+ + +P +L + + Y+ + QI +G+ Y
Sbjct: 88 RLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPEL 250
+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 140 LED-RRLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 197
Query: 251 IFGATEYTTSIDIWSAGCVLAELL 274
I YT D+WS G + EL+
Sbjct: 198 ILHRI-YTHQSDVWSYGVTVWELM 220
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L ++T + L+ + +P +L + + Y+ + QI +G+ Y
Sbjct: 81 RLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPEL 250
+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 133 LED-RRLVHRDLAARNVLVKTPQH-VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 251 IFGATEYTTSIDIWSAGCVLAELL 274
I YT D+WS G + EL+
Sbjct: 191 ILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 97/194 (50%), Gaps = 21/194 (10%)
Query: 122 QLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYV 180
Q + + HP+++ + + T + +VMEYV +++ R S Q++P+
Sbjct: 131 QFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKR------SKGQKLPVAEA 184
Query: 181 KLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYI 240
Y +I L+Y+H++ G+ + D+KP+N+++ Q+KL D G+ + + Y+
Sbjct: 185 IAYLLEILPALSYLHSI-GLVYNDLKPENIML--TEEQLKLIDLGAVSRI----NSFGYL 237
Query: 241 -CSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVE---IIKVL 296
+ ++APE++ T T + DI++ G LA L L P G VD L E ++K
Sbjct: 238 YGTPGFQAPEIV--RTGPTVATDIYTVGRTLAALTLDLPTRNGRY-VDGLPEDDPVLKTY 294
Query: 297 GTPTREEIRCMNPN 310
+ R R ++P+
Sbjct: 295 DSYGRLLRRAIDPD 308
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 109/222 (49%), Gaps = 28/222 (12%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV-------LQDRRYKNRELQLMRLMDHPNVISLKH 137
+G+GSFG V++ K G+ VA+K + Q + +KN E+ ++R H N++
Sbjct: 36 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 87
Query: 138 CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV 197
F ++K +L +V ++ + + H + + +I + Q +G+ Y+H
Sbjct: 88 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA- 142
Query: 198 PGVCHRDVKPQNLLV-DPLTHQVKLCDFGSA--KVLVKGEANISYIC-SRYYRAPELIFG 253
+ HRD+K N+ + + LT VK+ DFG A K G + S + APE+I
Sbjct: 143 KSIIHRDLKSNNIFLHEDLT--VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 200
Query: 254 ATE--YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+ Y+ D+++ G VL EL+ GQ + N DQ++ ++
Sbjct: 201 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 242
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 111/223 (49%), Gaps = 30/223 (13%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV-------LQDRRYKNRELQLMRLMDHPNVISLKH 137
+G+GSFG V++ K G+ VA+K + Q + +KN E+ ++R H N++
Sbjct: 44 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 95
Query: 138 CFFSTTSKDELFLNLVMEYVP-ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHT 196
F ++K +L +V ++ ++Y L + + + LI + T Q G+ Y+H
Sbjct: 96 LFMGYSTKPQL--AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ---GMDYLHA 150
Query: 197 VPGVCHRDVKPQNLLV-DPLTHQVKLCDFGSA--KVLVKGEANISYIC-SRYYRAPELIF 252
+ HRD+K N+ + + LT VK+ DFG A K G + S + APE+I
Sbjct: 151 -KSIIHRDLKSNNIFLHEDLT--VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 207
Query: 253 GATE--YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+ Y+ D+++ G VL EL+ GQ + N DQ++ ++
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 250
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L ++T + L+ + +P +L + + Y+ + QI +G+ Y
Sbjct: 87 RLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 138
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPEL 250
+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 139 LED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 196
Query: 251 IFGATEYTTSIDIWSAGCVLAELL 274
I YT D+WS G + EL+
Sbjct: 197 ILHRI-YTHQSDVWSYGVTVWELM 219
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L ++T + L+ + +P +L + + Y+ + QI +G+ Y
Sbjct: 84 RLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPEL 250
+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 136 LED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 251 IFGATEYTTSIDIWSAGCVLAELL 274
I YT D+WS G + EL+
Sbjct: 194 ILHRI-YTHQSDVWSYGVTVWELM 216
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 19/206 (9%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN---RELQLMRLMDHPNVISLKHCFFS 141
+G G FG V++ + TVA+K + +D +E +M+ + HPN++ L
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL----LG 74
Query: 142 TTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLY-TYQIFRGLAYIHTVPGV 200
+++ F ++ E++ T +L + N++ V LY QI + Y+
Sbjct: 75 VCTREPPFY-IITEFM--TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK-KNF 130
Query: 201 CHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPELIFGATEY 257
HRD+ +N LV H VK+ DFG ++ L+ G+ ++ +++ + APE + ++
Sbjct: 131 IHRDLAARNCLVGE-NHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESL-AYNKF 187
Query: 258 TTSIDIWSAGCVLAEL-LLGQPLFPG 282
+ D+W+ G +L E+ G +PG
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSPYPG 213
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L ++T + L+ + +P +L + + Y+ + QI +G+ Y
Sbjct: 88 RLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPEL 250
+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 140 LED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 197
Query: 251 IFGATEYTTSIDIWSAGCVLAELL 274
I YT D+WS G + EL+
Sbjct: 198 ILHRI-YTHQSDVWSYGVTVWELM 220
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L ++T + L+ + +P +L + + Y+ + QI +G+ Y
Sbjct: 84 RLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPEL 250
+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 136 LED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 251 IFGATEYTTSIDIWSAGCVLAELL 274
I YT D+WS G + EL+
Sbjct: 194 ILHRI-YTHQSDVWSYGVTVWELM 216
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+ +G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L ++T + L+M+ +P +L + + Y+ + QI +G+ Y
Sbjct: 88 RLLGICLTST------VQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPEL 250
+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 140 LED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 197
Query: 251 IFGATEYTTSIDIWSAGCVLAELL 274
I YT D+WS G + EL+
Sbjct: 198 ILHRI-YTHQSDVWSYGVTVWELM 220
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L ++T + L+ + +P +L + + Y+ + QI +G+ Y
Sbjct: 83 RLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPEL 250
+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 135 LED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 192
Query: 251 IFGATEYTTSIDIWSAGCVLAELL 274
I YT D+WS G + EL+
Sbjct: 193 ILHRI-YTHQSDVWSYGVTVWELM 215
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 105
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L ++T + L+ + +P +L + + Y+ + QI +G+ Y
Sbjct: 106 RLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 157
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPEL 250
+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 158 LED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 215
Query: 251 IFGATEYTTSIDIWSAGCVLAELL 274
I YT D+WS G + EL+
Sbjct: 216 ILHRI-YTHQSDVWSYGVTVWELM 238
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L ++T + L+ + +P +L + + Y+ + QI +G+ Y
Sbjct: 84 RLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPEL 250
+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 136 LED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 193
Query: 251 IFGATEYTTSIDIWSAGCVLAELL 274
I YT D+WS G + EL+
Sbjct: 194 ILHRI-YTHQSDVWSYGVTVWELM 216
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L ++T + L+ + +P +L + + Y+ + QI +G+ Y
Sbjct: 91 RLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 142
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPEL 250
+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 143 LED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 200
Query: 251 IFGATEYTTSIDIWSAGCVLAELL 274
I YT D+WS G + EL+
Sbjct: 201 ILHRI-YTHQSDVWSYGVTVWELM 223
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 38/221 (17%)
Query: 82 ERVVGTGSFGIVFQAKCLETGETVAIKK-VLQDRRYK----------NRELQLMRLMDHP 130
E+ +G G FG+V + + ++ VAIK +L D + RE+ +M ++HP
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 131 NVISLKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIY-VKL-YTYQ 186
N++ L + +VME+VP + +R+L ++ P+ + VKL
Sbjct: 84 NIVKLYGLMHNPP-------RMVMEFVPCGDLYHRLL------DKAHPIKWSVKLRLMLD 130
Query: 187 IFRGLAYIHTV-PGVCHRDVKPQNLLVDPLTHQVKLC----DFGSAKVLVKGEANISYIC 241
I G+ Y+ P + HRD++ N+ + L +C DF ++ V + + +
Sbjct: 131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGL--LG 188
Query: 242 SRYYRAPELIFGATE--YTTSIDIWSAGCVLAELLLGQPLF 280
+ + APE I GA E YT D +S +L +L G+ F
Sbjct: 189 NFQWMAPETI-GAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L ++T + L+ + +P +L + + Y+ + QI +G+ Y
Sbjct: 81 RLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPEL 250
+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 133 LED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 251 IFGATEYTTSIDIWSAGCVLAELL 274
I YT D+WS G + EL+
Sbjct: 191 ILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 26/206 (12%)
Query: 86 GTGSFGIVFQAKCLETGETVAIKKVL--------QDRRYKNRELQLMRLMDHPNVISLKH 137
G G FG+V++ T TVA+KK+ + ++ ++E+++ H N++ L
Sbjct: 31 GEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVEL-- 86
Query: 138 CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIY-VKLYTYQ-IFRGLAYIH 195
FS+ D L LV Y P +L S ++ PL + + Q G+ ++H
Sbjct: 87 LGFSSDGDD---LCLVYVYXPNG--SLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLH 141
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISY---ICSRYYRAPELIF 252
+ HRD+K N+L+D K+ DFG A+ K + + + Y APE +
Sbjct: 142 ENHHI-HRDIKSANILLDE-AFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALR 199
Query: 253 GATEYTTSIDIWSAGCVLAELLLGQP 278
G E T DI+S G VL E++ G P
Sbjct: 200 G--EITPKSDIYSFGVVLLEIITGLP 223
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 24/216 (11%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------LMRLMDHPN 131
++ + ++G G FG V++ + L G VA+K+ L++ R + ELQ ++ + H N
Sbjct: 39 NFSNKNILGRGGFGKVYKGR-LADGTLVAVKR-LKEERXQGGELQFQTEVEMISMAVHRN 96
Query: 132 VISLKHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQI--F 188
++ L+ F T + L LV Y+ ++ L+ + PL + K +
Sbjct: 97 LLRLRG--FCMTPTERL---LVYPYMANGSVASCLRERPE--SQPPLDWPKRQRIALGSA 149
Query: 189 RGLAYIHT--VPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYIC--SRY 244
RGLAY+H P + HRDVK N+L+D V + DFG AK++ + ++ +
Sbjct: 150 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRGTIG 208
Query: 245 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF 280
+ APE + + + D++ G +L EL+ GQ F
Sbjct: 209 HIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 243
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 105/216 (48%), Gaps = 24/216 (11%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQ------LMRLMDHPN 131
++ + ++G G FG V++ + L G VA+K+ L++ R + ELQ ++ + H N
Sbjct: 31 NFXNKNILGRGGFGKVYKGR-LADGXLVAVKR-LKEERTQGGELQFQTEVEMISMAVHRN 88
Query: 132 VISLKHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQI--F 188
++ L+ F T + L LV Y+ ++ L+ + PL + K +
Sbjct: 89 LLRLRG--FCMTPTERL---LVYPYMANGSVASCLRERPE--SQPPLDWPKRQRIALGSA 141
Query: 189 RGLAYIHT--VPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY-- 244
RGLAY+H P + HRDVK N+L+D V + DFG AK++ + ++
Sbjct: 142 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRGXIG 200
Query: 245 YRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLF 280
+ APE + + + D++ G +L EL+ GQ F
Sbjct: 201 HIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAF 235
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 109/222 (49%), Gaps = 28/222 (12%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV-------LQDRRYKNRELQLMRLMDHPNVISLKH 137
+G+GSFG V++ K G+ VA+K + Q + +KN E+ ++R H N++
Sbjct: 16 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNIL---- 67
Query: 138 CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV 197
F ++K +L +V ++ + + H + + +I + Q +G+ Y+H
Sbjct: 68 LFMGYSTKPQL--AIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA- 122
Query: 198 PGVCHRDVKPQNLLV-DPLTHQVKLCDFGSA--KVLVKGEANISYIC-SRYYRAPELIFG 253
+ HRD+K N+ + + LT VK+ DFG A K G + S + APE+I
Sbjct: 123 KSIIHRDLKSNNIFLHEDLT--VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRM 180
Query: 254 ATE--YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+ Y+ D+++ G VL EL+ GQ + N DQ++ ++
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L ++T + L+ + +P +L + + Y+ + QI +G+ Y
Sbjct: 81 RLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPEL 250
+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 133 LED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 251 IFGATEYTTSIDIWSAGCVLAELL 274
I YT D+WS G + EL+
Sbjct: 191 ILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L ++T + L+ + +P +L + + Y+ + QI +G+ Y
Sbjct: 75 RLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 126
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPEL 250
+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 127 LED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 184
Query: 251 IFGATEYTTSIDIWSAGCVLAELL 274
I YT D+WS G + EL+
Sbjct: 185 ILHRI-YTHQSDVWSYGVTVWELM 207
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 109/222 (49%), Gaps = 28/222 (12%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKV-------LQDRRYKNRELQLMRLMDHPNVISLKH 137
+G+GSFG V++ K G+ VA+K + Q + +KN E+ ++R H N+ L
Sbjct: 16 IGSGSFGTVYKGKW--HGD-VAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNI--LLF 69
Query: 138 CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV 197
+ST + L +V ++ + + H + + +I + Q +G+ Y+H
Sbjct: 70 MGYSTAPQ----LAIVTQWCEGS--SLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA- 122
Query: 198 PGVCHRDVKPQNLLV-DPLTHQVKLCDFGSAKVLVKGEANISY---ICSRYYRAPELIFG 253
+ HRD+K N+ + + LT VK+ DFG A V + + + S + APE+I
Sbjct: 123 KSIIHRDLKSNNIFLHEDLT--VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRM 180
Query: 254 ATE--YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEII 293
+ Y+ D+++ G VL EL+ GQ + N DQ++ ++
Sbjct: 181 QDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 99/214 (46%), Gaps = 27/214 (12%)
Query: 77 ISYMA-ERVVGTGSFGIVFQAKCLETGET---VAIKKVL-----QDRRYKNRELQLMRLM 127
+SY+ E V+G G FG V + + G+ VAIK + + RR E +M
Sbjct: 13 VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQF 72
Query: 128 DHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQ-RMPLIYVKLYTYQ 186
+HPN+I L+ T S + L ME L + +N + +I +
Sbjct: 73 EHPNIIRLEGVV--TNSMPVMILTEFME------NGALDSFLRLNDGQFTVIQLVGMLRG 124
Query: 187 IFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR--- 243
I G+ Y+ + V HRD+ +N+LV+ K+ DFG ++ L + ++ +Y S
Sbjct: 125 IASGMRYLAEMSYV-HRDLAARNILVNS-NLVCKVSDFGLSRFLEENSSDPTYTSSLGGK 182
Query: 244 ---YYRAPELIFGATEYTTSIDIWSAGCVLAELL 274
+ APE I ++T++ D WS G V+ E++
Sbjct: 183 IPIRWTAPEAI-AFRKFTSASDAWSYGIVMWEVM 215
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 97/206 (47%), Gaps = 27/206 (13%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I + + R N+E+ +M +D+P+V
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPE--TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGL 191
L ++T + L+ + +P + V +H ++ + Y+ + QI +G+
Sbjct: 115 RLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQ----YLLNWCVQIAKGM 164
Query: 192 AYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAP 248
Y+ + HRD+ +N+LV H VK+ DFG AK+L E + + A
Sbjct: 165 NYLED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 222
Query: 249 ELIFGATEYTTSIDIWSAGCVLAELL 274
E I YT D+WS G + EL+
Sbjct: 223 ESILHRI-YTHQSDVWSYGVTVWELM 247
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+G+G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L ++T + L+ + +P +L + + Y+ + QI G+ Y
Sbjct: 78 RLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAEGMNY 129
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPEL 250
+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 130 LED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 187
Query: 251 IFGATEYTTSIDIWSAGCVLAELL 274
I YT D+WS G + EL+
Sbjct: 188 ILHRI-YTHQSDVWSYGVTVWELM 210
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 83 RVVGTGSFGIVFQAKCLET---GETVAIK--KVLQDRRYKNRELQ---LMRLMDHPNVIS 134
R +G G FG V Q + VAIK K + + LQ MR DHP+++
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L +++ ++ ++ME R + + L + LY YQ+ LAY+
Sbjct: 456 L----IGVITENPVW--IIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYL 507
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-----YYRAPE 249
+ V HRD+ +N+LV T VKL DFG ++ + E + Y S+ + APE
Sbjct: 508 ESKRFV-HRDIAARNVLVSA-TDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPE 562
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLL 275
I +T++ D+W G + E+L+
Sbjct: 563 SI-NFRRFTSASDVWMFGVCMWEILM 587
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 83 RVVGTGSFGIVFQAKCLET---GETVAIK--KVLQDRRYKNRELQ---LMRLMDHPNVIS 134
R +G G FG V Q + VAIK K + + LQ MR DHP+++
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L +++ ++ ++ME R + + L + LY YQ+ LAY+
Sbjct: 76 L----IGVITENPVW--IIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYL 127
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-----YYRAPE 249
+ V HRD+ +N+LV T VKL DFG ++ + E + Y S+ + APE
Sbjct: 128 ESKRFV-HRDIAARNVLVSA-TDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPE 182
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLL 275
I +T++ D+W G + E+L+
Sbjct: 183 SI-NFRRFTSASDVWMFGVCMWEILM 207
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 25/205 (12%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVIS-------- 134
+V+G+G+FG V++ + GE V I ++ R ++D V++
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVS 82
Query: 135 --LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
L C ST + LV + +P +L H R+ + + QI +G++
Sbjct: 83 RLLGICLTST-------VQLVTQLMPYGC--LLDHVRENRGRLGSQDLLNWCMQIAKGMS 133
Query: 193 YIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPE 249
Y+ V + HRD+ +N+LV H VK+ DFG A++L E + + A E
Sbjct: 134 YLEDVR-LVHRDLAARNVLVKSPNH-VKITDFGLARLLDIDETEYHADGGKVPIKWMALE 191
Query: 250 LIFGATEYTTSIDIWSAGCVLAELL 274
I +T D+WS G + EL+
Sbjct: 192 SIL-RRRFTHQSDVWSYGVTVWELM 215
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 24/206 (11%)
Query: 82 ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKNR-----ELQLMRLMDHPNVI 133
E+V+G G FG V + G+ VAIK + K R E +M DHPN+I
Sbjct: 34 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 93
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L+ T K + + ME + + R +I + I G+ Y
Sbjct: 94 HLEGVV--TKCKPVMIITEYMENGSLDAF-----LRKNDGRFTVIQLVGMLRGIGSGMKY 146
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-----YYRAP 248
+ + V HRD+ +N+LV+ K+ DFG ++VL + + +Y + AP
Sbjct: 147 LSDMSAV-HRDLAARNILVNS-NLVCKVSDFGMSRVL-EDDPEAAYTTRGGKIPIRWTAP 203
Query: 249 ELIFGATEYTTSIDIWSAGCVLAELL 274
E I ++T++ D+WS G V+ E++
Sbjct: 204 EAI-AYRKFTSASDVWSYGIVMWEVM 228
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 33/212 (15%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKV-LQDRRYKNRELQLMRL--MDHPNVISLKHCFF 140
V G FG V++A+ L E VA+K +QD++ E ++ L M H N++
Sbjct: 31 VKARGRFGCVWKAQLLN--EYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEK 88
Query: 141 STTSKDELFLNLVMEYVPETMYRVLK-HYSSMNQRMPLIYVKLYTYQIFRGLAYIH-TVP 198
TS D + + ++ LK + S N+ L ++ + RGLAY+H +P
Sbjct: 89 RGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNE---LCHI---AETMARGLAYLHEDIP 142
Query: 199 G--------VCHRDVKPQNLLVDPLTHQVKLC--DFGSAKVLVKGEA---NISYICSRYY 245
G + HRD+K +N+L L + + C DFG A G++ + +R Y
Sbjct: 143 GLKDGHKPAISHRDIKSKNVL---LKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRY 199
Query: 246 RAPELIFGATEYTTS----IDIWSAGCVLAEL 273
APE++ GA + ID+++ G VL EL
Sbjct: 200 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 24/206 (11%)
Query: 82 ERVVGTGSFGIVFQAKCLETGET---VAIKKVLQDRRYKNR-----ELQLMRLMDHPNVI 133
ERV+G G FG V + G+ VAIK + K R E +M DHPN+I
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L+ T SK + + ME ++ LK + + +I + I G+ Y
Sbjct: 87 HLEGVV--TKSKPVMIVTEYME--NGSLDTFLKKN---DGQFTVIQLVGMLRGISAGMKY 139
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-----YYRAP 248
+ + G HRD+ +N+L++ K+ DFG ++VL + + +Y + AP
Sbjct: 140 LSDM-GYVHRDLAARNILINS-NLVCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTAP 196
Query: 249 ELIFGATEYTTSIDIWSAGCVLAELL 274
E I ++T++ D+WS G V+ E++
Sbjct: 197 EAI-AFRKFTSASDVWSYGIVMWEVV 221
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 34/226 (15%)
Query: 72 EPKQTISYMA----------ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKN 118
+P QT+ A ++VVG G FG V + + +VAIK + K
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 119 R-----ELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQ 173
R E +M DHPN+I L+ T SK + + ME + + KH +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEYMENGSLDSF-LRKH----DA 142
Query: 174 RMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG 233
+ +I + I G+ Y+ + G HRD+ +N+L++ K+ DFG A+VL +
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDM-GYVHRDLAARNILINS-NLVCKVSDFGLARVL-ED 199
Query: 234 EANISYICSR-----YYRAPELIFGATEYTTSIDIWSAGCVLAELL 274
+ +Y + +PE I ++T++ D+WS G VL E++
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 26/207 (12%)
Query: 82 ERVVGTGSFGIVFQAKCLETGET---VAIKKVL-----QDRRYKNRELQLMRLMDHPNVI 133
E+++G+G G V + G+ VAIK + + RR E +M DHPN+I
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
L+ ++ L + +V EY+ ++ L+ + M L+ + + G+
Sbjct: 114 RLE----GVVTRGRLAM-IVTEYMENGSLDTFLRTHDGQFTIMQLVGM---LRGVGAGMR 165
Query: 193 YIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-----YYRA 247
Y+ + G HRD+ +N+LVD K+ DFG ++VL + + + +Y + + A
Sbjct: 166 YLSDL-GYVHRDLAARNVLVDS-NLVCKVSDFGLSRVL-EDDPDAAYTTTGGKIPIRWTA 222
Query: 248 PELIFGATEYTTSIDIWSAGCVLAELL 274
PE I T ++++ D+WS G V+ E+L
Sbjct: 223 PEAIAFRT-FSSASDVWSFGVVMWEVL 248
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 34/226 (15%)
Query: 72 EPKQTISYMA----------ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKN 118
+P QT+ A ++VVG G FG V + + +VAIK + K
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 119 R-----ELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQ 173
R E +M DHPN+I L+ T SK + + ME + + KH +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEXMENGSLDSF-LRKH----DA 142
Query: 174 RMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG 233
+ +I + I G+ Y+ + G HRD+ +N+L++ K+ DFG ++VL +
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDM-GAVHRDLAARNILINS-NLVCKVSDFGLSRVL-ED 199
Query: 234 EANISYICSR-----YYRAPELIFGATEYTTSIDIWSAGCVLAELL 274
+ +Y + +PE I ++T++ D+WS G VL E++
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 25/190 (13%)
Query: 187 IFRGLAYIHTVPGVCHRDVKPQNLLVD--PLTHQVKLCDFG-SAKVLVKGEAN------- 236
+ L ++H G+ HRD+KP+N+L + VK+CDFG + + + G+ +
Sbjct: 120 VASALDFLHN-KGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPEL 178
Query: 237 ISYICSRYYRAPELIFGATE----YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEI 292
++ S Y APE++ +E Y D+WS G +L LL G P F G D +
Sbjct: 179 LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWD- 237
Query: 293 IKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC 352
+ P + + + + FP W + A DL S+LL R
Sbjct: 238 -RGEACPACQNMLFESIQEGKYEFPD---KDW-----AHISCAAKDLISKLLVRDAKQRL 288
Query: 353 TALEACAHPF 362
+A + HP+
Sbjct: 289 SAAQVLQHPW 298
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+ +G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L ++T + L+ + +P +L + + Y+ + QI +G+ Y
Sbjct: 88 RLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPEL 250
+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 140 LED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 197
Query: 251 IFGATEYTTSIDIWSAGCVLAELL 274
I YT D+WS G + EL+
Sbjct: 198 ILHRI-YTHQSDVWSYGVTVWELM 220
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 34/226 (15%)
Query: 72 EPKQTISYMA----------ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKN 118
+P QT+ A ++VVG G FG V + + +VAIK + K
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 119 R-----ELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQ 173
R E +M DHPN+I L+ T SK + + ME + + KH +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEYMENGSLDSF-LRKH----DA 142
Query: 174 RMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG 233
+ +I + I G+ Y+ + G HRD+ +N+L++ K+ DFG ++VL +
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDM-GFVHRDLAARNILINS-NLVCKVSDFGLSRVL-ED 199
Query: 234 EANISYICSR-----YYRAPELIFGATEYTTSIDIWSAGCVLAELL 274
+ +Y + +PE I ++T++ D+WS G VL E++
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR-----YKNREL----QLMRLMDHPNVI 133
+V+ +G+FG V++ + GE V I +++ R N+E+ +M +D+P+V
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L ++T + L+ + +P +L + + Y+ + QI +G+ Y
Sbjct: 81 RLLGICLTST------VQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPEL 250
+ + HRD+ +N+LV H VK+ DFG AK+L E + + A E
Sbjct: 133 LED-RRLVHRDLAARNVLVKTPQH-VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALES 190
Query: 251 IFGATEYTTSIDIWSAGCVLAELL 274
I YT D+WS G + EL+
Sbjct: 191 ILHRI-YTHQSDVWSYGVTVWELM 213
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 83 RVVGTGSFGIVFQAKCLETGE---TVAIK--KVLQDRRYKNRELQ---LMRLMDHPNVIS 134
R +G G FG V Q + VAIK K + + LQ MR DHP+++
Sbjct: 18 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 77
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L +++ ++ ++ME T+ + + L + LY YQ+ LAY+
Sbjct: 78 L----IGVITENPVW--IIMELC--TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 129
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-----YYRAPE 249
+ V HRD+ +N+LV VKL DFG ++ + E + Y S+ + APE
Sbjct: 130 ESKRFV-HRDIAARNVLVSS-NDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPE 184
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLL 275
I +T++ D+W G + E+L+
Sbjct: 185 SI-NFRRFTSASDVWMFGVCMWEILM 209
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 83 RVVGTGSFGIVFQAKCLET---GETVAIK--KVLQDRRYKNRELQ---LMRLMDHPNVIS 134
R +G G FG V Q + VAIK K + + LQ MR DHP+++
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L +++ ++ ++ME T+ + + L + LY YQ+ LAY+
Sbjct: 76 L----IGVITENPVW--IIMELC--TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 127
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-----YYRAPE 249
+ V HRD+ +N+LV VKL DFG ++ + E + Y S+ + APE
Sbjct: 128 ESKRFV-HRDIAARNVLVSS-NDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPE 182
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLL 275
I +T++ D+W G + E+L+
Sbjct: 183 SI-NFRRFTSASDVWMFGVCMWEILM 207
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 83 RVVGTGSFGIVFQAKCLETGE---TVAIK--KVLQDRRYKNRELQ---LMRLMDHPNVIS 134
R +G G FG V Q + VAIK K + + LQ MR DHP+++
Sbjct: 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 80
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L +++ ++ ++ME T+ + + L + LY YQ+ LAY+
Sbjct: 81 L----IGVITENPVW--IIMELC--TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 132
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-----YYRAPE 249
+ V HRD+ +N+LV VKL DFG ++ + E + Y S+ + APE
Sbjct: 133 ESKRFV-HRDIAARNVLVSS-NDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPE 187
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLL 275
I +T++ D+W G + E+L+
Sbjct: 188 SI-NFRRFTSASDVWMFGVCMWEILM 212
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 83 RVVGTGSFGIVFQAKCLETGE---TVAIK--KVLQDRRYKNRELQ---LMRLMDHPNVIS 134
R +G G FG V Q + VAIK K + + LQ MR DHP+++
Sbjct: 19 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 78
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L +++ ++ ++ME T+ + + L + LY YQ+ LAY+
Sbjct: 79 L----IGVITENPVW--IIMELC--TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 130
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-----YYRAPE 249
+ V HRD+ +N+LV VKL DFG ++ + E + Y S+ + APE
Sbjct: 131 ESKRFV-HRDIAARNVLVSS-NDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPE 185
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLL 275
I +T++ D+W G + E+L+
Sbjct: 186 SI-NFRRFTSASDVWMFGVCMWEILM 210
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 83 RVVGTGSFGIVFQAKCLETGE---TVAIK--KVLQDRRYKNRELQ---LMRLMDHPNVIS 134
R +G G FG V Q + VAIK K + + LQ MR DHP+++
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 72
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L +++ ++ ++ME T+ + + L + LY YQ+ LAY+
Sbjct: 73 L----IGVITENPVW--IIMELC--TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 124
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-----YYRAPE 249
+ V HRD+ +N+LV VKL DFG ++ + E + Y S+ + APE
Sbjct: 125 ESKRFV-HRDIAARNVLVSS-NDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPE 179
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLL 275
I +T++ D+W G + E+L+
Sbjct: 180 SI-NFRRFTSASDVWMFGVCMWEILM 204
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 34/226 (15%)
Query: 72 EPKQTISYMA----------ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKN 118
+P QT+ A ++VVG G FG V + + +VAIK + K
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 119 R-----ELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQ 173
R E +M DHPN+I L+ T SK + + ME + + KH +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEXMENGSLDSF-LRKH----DA 142
Query: 174 RMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG 233
+ +I + I G+ Y+ + G HRD+ +N+L++ K+ DFG ++VL +
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDM-GYVHRDLAARNILINS-NLVCKVSDFGLSRVL-ED 199
Query: 234 EANISYICSR-----YYRAPELIFGATEYTTSIDIWSAGCVLAELL 274
+ +Y + +PE I ++T++ D+WS G VL E++
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 83 RVVGTGSFGIVFQAKCLETGE---TVAIK--KVLQDRRYKNRELQ---LMRLMDHPNVIS 134
R +G G FG V Q + VAIK K + + LQ MR DHP+++
Sbjct: 44 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 103
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L +++ ++ ++ME T+ + + L + LY YQ+ LAY+
Sbjct: 104 L----IGVITENPVW--IIMELC--TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 155
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-----YYRAPE 249
+ V HRD+ +N+LV VKL DFG ++ + E + Y S+ + APE
Sbjct: 156 ESKRFV-HRDIAARNVLVSS-NDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPE 210
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLL 275
I +T++ D+W G + E+L+
Sbjct: 211 SI-NFRRFTSASDVWMFGVCMWEILM 235
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 34/226 (15%)
Query: 72 EPKQTISYMA----------ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKN 118
+P QT+ A ++VVG G FG V + + +VAIK + K
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 119 R-----ELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQ 173
R E +M DHPN+I L+ T SK + + ME + + KH +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEYMENGSLDSF-LRKH----DA 142
Query: 174 RMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG 233
+ +I + I G+ Y+ + G HRD+ +N+L++ K+ DFG ++VL +
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDM-GYVHRDLAARNILINS-NLVCKVSDFGLSRVL-ED 199
Query: 234 EANISYICSR-----YYRAPELIFGATEYTTSIDIWSAGCVLAELL 274
+ +Y + +PE I ++T++ D+WS G VL E++
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 94/206 (45%), Gaps = 27/206 (13%)
Query: 83 RVVGTGSFGIVFQAKCLETGE---TVAIK--KVLQDRRYKNRELQ---LMRLMDHPNVIS 134
R +G G FG V Q + VAIK K + + LQ MR DHP+++
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L +++ ++ ++ME T+ + + L + LY YQ+ LAY+
Sbjct: 76 L----IGVITENPVW--IIMELC--TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 127
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-----YYRAPE 249
+ V HRD+ +N+LV VKL DFG ++ + E + Y S+ + APE
Sbjct: 128 ESKRFV-HRDIAARNVLVSS-NDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPE 182
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLL 275
I +T++ D+W G + E+L+
Sbjct: 183 SI-NFRRFTSASDVWMFGVCMWEILM 207
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 34/226 (15%)
Query: 72 EPKQTISYMA----------ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKN 118
+P QT+ A ++VVG G FG V + + +VAIK + K
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 119 R-----ELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQ 173
R E +M DHPN+I L+ T SK + + ME + + KH +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEYMENGSLDSF-LRKH----DA 142
Query: 174 RMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG 233
+ +I + I G+ Y+ + G HRD+ +N+L++ K+ DFG ++VL +
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDM-GYVHRDLAARNILINS-NLVCKVSDFGLSRVL-ED 199
Query: 234 EANISYICSR-----YYRAPELIFGATEYTTSIDIWSAGCVLAELL 274
+ +Y + +PE I ++T++ D+WS G VL E++
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 34/226 (15%)
Query: 72 EPKQTISYMA----------ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKN 118
+P QT+ A ++VVG G FG V + + +VAIK + K
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 119 R-----ELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQ 173
R E +M DHPN+I L+ T SK + + ME + + KH +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEYMENGSLDSF-LRKH----DA 142
Query: 174 RMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG 233
+ +I + I G+ Y+ + G HRD+ +N+L++ K+ DFG ++VL +
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDM-GYVHRDLAARNILINS-NLVCKVSDFGLSRVL-ED 199
Query: 234 EANISYICSR-----YYRAPELIFGATEYTTSIDIWSAGCVLAELL 274
+ +Y + +PE I ++T++ D+WS G VL E++
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 27/206 (13%)
Query: 83 RVVGTGSFGIVFQAKCLET---GETVAIK--KVLQDRRYKNRELQ---LMRLMDHPNVIS 134
R +G G FG V Q + VAIK K + + LQ MR DHP+++
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 455
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L +++ ++ ++ME R + + L + LY YQ+ LAY+
Sbjct: 456 L----IGVITENPVW--IIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYL 507
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-----YYRAPE 249
+ V HRD+ +N+LV VKL DFG ++ + E + Y S+ + APE
Sbjct: 508 ESKRFV-HRDIAARNVLVSS-NDCVKLGDFGLSRYM---EDSTYYKASKGKLPIKWMAPE 562
Query: 250 LIFGATEYTTSIDIWSAGCVLAELLL 275
I +T++ D+W G + E+L+
Sbjct: 563 SI-NFRRFTSASDVWMFGVCMWEILM 587
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 34/226 (15%)
Query: 72 EPKQTISYMA----------ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKN 118
+P QT+ A ++VVG G FG V + + +VAIK + K
Sbjct: 28 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 87
Query: 119 R-----ELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQ 173
R E +M DHPN+I L+ T SK + + ME + + KH +
Sbjct: 88 RRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEYMENGSLDSF-LRKH----DA 140
Query: 174 RMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG 233
+ +I + I G+ Y+ + G HRD+ +N+L++ K+ DFG ++VL +
Sbjct: 141 QFTVIQLVGMLRGIASGMKYLSDM-GYVHRDLAARNILINS-NLVCKVSDFGLSRVL-ED 197
Query: 234 EANISYICSR-----YYRAPELIFGATEYTTSIDIWSAGCVLAELL 274
+ +Y + +PE I ++T++ D+WS G VL E++
Sbjct: 198 DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 242
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 34/226 (15%)
Query: 72 EPKQTISYMA----------ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKN 118
+P QT+ A ++VVG G FG V + + +VAIK + K
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 119 R-----ELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQ 173
R E +M DHPN+I L+ T SK + + ME + + KH +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEYMENGSLDSF-LRKH----DA 142
Query: 174 RMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG 233
+ +I + I G+ Y+ + G HRD+ +N+L++ K+ DFG ++VL +
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDM-GYVHRDLAARNILINS-NLVCKVSDFGLSRVL-ED 199
Query: 234 EANISYICSR-----YYRAPELIFGATEYTTSIDIWSAGCVLAELL 274
+ +Y + +PE I ++T++ D+WS G VL E++
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 101/226 (44%), Gaps = 34/226 (15%)
Query: 72 EPKQTISYMA----------ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKN 118
+P QT+ A ++VVG G FG V + + +VAIK + K
Sbjct: 30 DPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ 89
Query: 119 R-----ELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQ 173
R E +M DHPN+I L+ T SK + + ME + + KH +
Sbjct: 90 RRDFLGEASIMGQFDHPNIIRLEGVV--TKSKPVMIVTEYMENGSLDSF-LRKH----DA 142
Query: 174 RMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG 233
+ +I + I G+ Y+ + G HRD+ +N+L++ K+ DFG +VL +
Sbjct: 143 QFTVIQLVGMLRGIASGMKYLSDM-GYVHRDLAARNILINS-NLVCKVSDFGLGRVL-ED 199
Query: 234 EANISYICSR-----YYRAPELIFGATEYTTSIDIWSAGCVLAELL 274
+ +Y + +PE I ++T++ D+WS G VL E++
Sbjct: 200 DPEAAYTTRGGKIPIRWTSPEAI-AYRKFTSASDVWSYGIVLWEVM 244
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 105/245 (42%), Gaps = 46/245 (18%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVL----------QDRRYKNRELQLM-RLMDHPN 131
+ +G G+FG V +A G+ A+ KV ++ EL++M L H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 132 VISL--------------KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPL 177
+++L ++C + LN + P + + +++
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGD------LLNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 178 IYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK-------VL 230
+ ++ Q+ +G+A++ + HRDV +N+L+ H K+ DFG A+ +
Sbjct: 166 RDLLHFSSQVAQGMAFLAS-KNCIHRDVAARNVLLTN-GHVAKIGDFGLARDIMNDSNYI 223
Query: 231 VKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQL 289
VKG A + + APE IF YT D+WS G +L E+ LG +PG +
Sbjct: 224 VKGNARLPV----KWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF 278
Query: 290 VEIIK 294
+++K
Sbjct: 279 YKLVK 283
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 24/206 (11%)
Query: 82 ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKNR-----ELQLMRLMDHPNVI 133
E+V+G G FG V + G+ VAIK + K R E +M DHPN+I
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L+ T K + + ME + + R +I + I G+ Y
Sbjct: 79 HLEGVV--TKCKPVMIITEYMENGSLDAF-----LRKNDGRFTVIQLVGMLRGIGSGMKY 131
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-----YYRAP 248
+ + V HRD+ +N+LV+ K+ DFG ++VL + + +Y + AP
Sbjct: 132 LSDMSYV-HRDLAARNILVNS-NLVCKVSDFGMSRVL-EDDPEAAYTTRGGKIPIRWTAP 188
Query: 249 ELIFGATEYTTSIDIWSAGCVLAELL 274
E I ++T++ D+WS G V+ E++
Sbjct: 189 EAI-AYRKFTSASDVWSYGIVMWEVM 213
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 82 ERVVGTGSFGIVFQAKCLETGET---VAIKKVL-----QDRRYKNRELQLMRLMDHPNVI 133
E+++G+G G V + G+ VAIK + + RR E +M DHPN+I
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
L+ ++ L + +V EY+ ++ L+ + M L+ + + G+
Sbjct: 114 RLE----GVVTRGRLAM-IVTEYMENGSLDTFLRTHDGQFTIMQLVGM---LRGVGAGMR 165
Query: 193 YIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG-EANISYICSRY---YRAP 248
Y+ + G HRD+ +N+LVD K+ DFG ++VL +A + + + AP
Sbjct: 166 YLSDL-GYVHRDLAARNVLVDS-NLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAP 223
Query: 249 ELIFGATEYTTSIDIWSAGCVLAELL 274
E I T ++++ D+WS G V+ E+L
Sbjct: 224 EAIAFRT-FSSASDVWSFGVVMWEVL 248
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 24/206 (11%)
Query: 82 ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKNR-----ELQLMRLMDHPNVI 133
E+V+G G FG V + G+ VAIK + K R E +M DHPN+I
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L+ T K + + ME + + R +I + I G+ Y
Sbjct: 73 HLEGVV--TKCKPVMIITEYMENGSLDAF-----LRKNDGRFTVIQLVGMLRGIGSGMKY 125
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-----YYRAP 248
+ + V HRD+ +N+LV+ K+ DFG ++VL + + +Y + AP
Sbjct: 126 LSDMSYV-HRDLAARNILVNS-NLVCKVSDFGMSRVL-EDDPEAAYTTRGGKIPIRWTAP 182
Query: 249 ELIFGATEYTTSIDIWSAGCVLAELL 274
E I ++T++ D+WS G V+ E++
Sbjct: 183 EAI-AYRKFTSASDVWSYGIVMWEVM 207
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 77 ISYMA-ERVVGTGSFGIVFQAKCLETGET---VAIKKVL-----QDRRYKNRELQLMRLM 127
+SY+ E V+G G FG V + + G+ VAIK + + RR E +M
Sbjct: 15 VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQF 74
Query: 128 DHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQ-RMPLIYVKLYTYQ 186
+HPN+I L+ T S + L ME L + +N + +I +
Sbjct: 75 EHPNIIRLEGVV--TNSMPVMILTEFME------NGALDSFLRLNDGQFTVIQLVGMLRG 126
Query: 187 IFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR--- 243
I G+ Y+ + V HRD+ +N+LV+ K+ DFG ++ L + ++ + S
Sbjct: 127 IASGMRYLAEMSYV-HRDLAARNILVNS-NLVCKVSDFGLSRFLEENSSDPTETSSLGGK 184
Query: 244 ---YYRAPELIFGATEYTTSIDIWSAGCVLAELL 274
+ APE I ++T++ D WS G V+ E++
Sbjct: 185 IPIRWTAPEAI-AFRKFTSASDAWSYGIVMWEVM 217
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 49/238 (20%)
Query: 83 RVVGTGSFGIVFQAKCL----ETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNV 132
+ +G G FG V +A G T K+L++ R E +++ ++HP+V
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKL---------- 182
I L + S+D L L++EY Y L+ + ++++ Y+
Sbjct: 89 IKL----YGACSQDGPLL-LIVEYAK---YGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 183 --------------YTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 228
+ +QI +G+ Y+ + + HRD+ +N+LV ++K+ DFG ++
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYLAEM-SLVHRDLAARNILVAE-GRKMKISDFGLSR 198
Query: 229 VLVKGEANISYICSRY---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPG 282
+ + ++ + R + A E +F YTT D+WS G +L E++ LG +PG
Sbjct: 199 DVYEEDSXVKRSQGRIPVKWMAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 24/206 (11%)
Query: 82 ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKNR-----ELQLMRLMDHPNVI 133
++VVG G FG V + + +VAIK + K R E +M DHPN+I
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L+ T SK + + ME + + KH + + +I + I G+ Y
Sbjct: 81 RLEGVV--TKSKPVMIVTEXMENGSLDSF-LRKH----DAQFTVIQLVGMLRGIASGMKY 133
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-----YYRAP 248
+ + G HRD+ +N+L++ K+ DFG ++VL + + +Y + +P
Sbjct: 134 LSDM-GYVHRDLAARNILINS-NLVCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSP 190
Query: 249 ELIFGATEYTTSIDIWSAGCVLAELL 274
E I ++T++ D+WS G VL E++
Sbjct: 191 EAI-AYRKFTSASDVWSYGIVLWEVM 215
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 24/206 (11%)
Query: 82 ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKNR-----ELQLMRLMDHPNVI 133
++VVG G FG V + + +VAIK + K R E +M DHPN+I
Sbjct: 38 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 97
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L+ T SK + + ME + + KH + + +I + I G+ Y
Sbjct: 98 RLEGVV--TKSKPVMIVTEYMENGSLDSF-LRKH----DAQFTVIQLVGMLRGIASGMKY 150
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-----YYRAP 248
+ + G HRD+ +N+L++ K+ DFG ++VL + + +Y + +P
Sbjct: 151 LSDM-GYVHRDLAARNILINS-NLVCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSP 207
Query: 249 ELIFGATEYTTSIDIWSAGCVLAELL 274
E I ++T++ D+WS G VL E++
Sbjct: 208 EAI-AYRKFTSASDVWSYGIVLWEVM 232
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 49/238 (20%)
Query: 83 RVVGTGSFGIVFQAKCL----ETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNV 132
+ +G G FG V +A G T K+L++ R E +++ ++HP+V
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKL---------- 182
I L + S+D L L++EY Y L+ + ++++ Y+
Sbjct: 89 IKL----YGACSQDGPLL-LIVEYAK---YGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 183 --------------YTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 228
+ +QI +G+ Y+ + + HRD+ +N+LV ++K+ DFG ++
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYLAEMK-LVHRDLAARNILVAE-GRKMKISDFGLSR 198
Query: 229 VLVKGEANISYICSRY---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPG 282
+ + ++ + R + A E +F YTT D+WS G +L E++ LG +PG
Sbjct: 199 DVYEEDSXVKRSQGRIPVKWMAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 33/209 (15%)
Query: 83 RVVGTGSFGIVFQAKCLET---GETVAIK--KVLQDRRYKNRELQ---LMRLMDHPNVIS 134
R +G G FG V Q + VAIK K + + LQ MR DHP+++
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 135 LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYI 194
L +++ ++ ++ME R + + L + LY YQ+ LAY+
Sbjct: 76 L----IGVITENPVW--IIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYL 127
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVL--------VKGEANISYICSRYYR 246
+ V HRD+ +N+LV VKL DFG ++ + KG+ I ++
Sbjct: 128 ESKRFV-HRDIAARNVLVSS-NDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWM------ 179
Query: 247 APELIFGATEYTTSIDIWSAGCVLAELLL 275
APE I +T++ D+W G + E+L+
Sbjct: 180 APESI-NFRRFTSASDVWMFGVCMWEILM 207
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 107/248 (43%), Gaps = 54/248 (21%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVL----------QDRRYKNRELQLM-RLMDHPN 131
+ +G G+FG V +A G+ A+ KV ++ EL++M L H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 132 VISL--------------KHCFFSTTSKDELFLNLVMEYVPETMYRVLK---HYSSMNQR 174
+++L ++C + LN + RVL+ ++ N
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGD------LLNFL-----RRKSRVLETDPAFAIANST 160
Query: 175 MPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK------ 228
+ + ++ Q+ +G+A++ + HRDV +N+L+ H K+ DFG A+
Sbjct: 161 LSTRDLLHFSSQVAQGMAFLAS-KNCIHRDVAARNVLLTN-GHVAKIGDFGLARDIMNDS 218
Query: 229 -VLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAV 286
+VKG A + + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 219 NYIVKGNARLPV----KWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPGILVN 273
Query: 287 DQLVEIIK 294
+ +++K
Sbjct: 274 SKFYKLVK 281
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 82 ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKNR-----ELQLMRLMDHPNVI 133
ERV+G G FG V + G+ VAIK + K R E +M DHPNV+
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L+ T K + + ME + + KH + + +I + I G+ Y
Sbjct: 108 HLEGVV--TRGKPVMIVIEFMENGALDAF-LRKH----DGQFTVIQLVGMLRGIAAGMRY 160
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKG-EANISYICSRY---YRAPE 249
+ + G HRD+ +N+LV+ K+ DFG ++V+ EA + + + APE
Sbjct: 161 LADM-GYVHRDLAARNILVNS-NLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPE 218
Query: 250 LIFGATEYTTSIDIWSAGCVLAELL 274
I ++T++ D+WS G V+ E++
Sbjct: 219 AI-QYRKFTSASDVWSYGIVMWEVM 242
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 24/206 (11%)
Query: 82 ERVVGTGSFGIVFQAKCLETGE---TVAIKKVLQDRRYKNR-----ELQLMRLMDHPNVI 133
++VVG G FG V + + +VAIK + K R E +M DHPN+I
Sbjct: 21 DKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
L+ T SK + + ME + + KH + + +I + I G+ Y
Sbjct: 81 RLEGVV--TKSKPVMIVTEYMENGSLDSF-LRKH----DAQFTVIQLVGMLRGIASGMKY 133
Query: 194 IHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR-----YYRAP 248
+ + G HRD+ +N+L++ K+ DFG ++VL + + +Y + +P
Sbjct: 134 LSDM-GYVHRDLAARNILINS-NLVCKVSDFGLSRVL-EDDPEAAYTTRGGKIPIRWTSP 190
Query: 249 ELIFGATEYTTSIDIWSAGCVLAELL 274
E I ++T++ D+WS G VL E++
Sbjct: 191 EAI-AYRKFTSASDVWSYGIVLWEVM 215
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 40/288 (13%)
Query: 73 PKQTISYMAERVVGTGSFGIVFQAKCLET-GETV--AIKKV--LQDRRYKNRELQ---LM 124
P I + E V+G G FG V+ L+ G+ + A+K + + D ++ L +M
Sbjct: 26 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 84
Query: 125 RLMDHPNVISLKH-CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKL- 182
+ HPNV+SL C S S + +P + L+++ P + +
Sbjct: 85 KDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLIG 136
Query: 183 YTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISY--- 239
+ Q+ +G+ Y+ + V HRD+ +N ++D VK+ DFG A+ + E +
Sbjct: 137 FGLQVAKGMKYLASKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDKEXXSVHNKT 194
Query: 240 ---ICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKV 295
+ ++ L ++TT D+WS G +L EL+ G P +P N D V ++
Sbjct: 195 GAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-- 250
Query: 296 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 343
+ R + P Y ++ WH M P +L SR+
Sbjct: 251 ------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 290
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 117/291 (40%), Gaps = 58/291 (19%)
Query: 80 MAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQL-MRLMDHPNVISLKHC 138
+ +V+G G G V Q T E A+K +LQD RE++L R P+++ +
Sbjct: 21 VTSQVLGLGINGKVLQIFNKRTQEKFALK-MLQDCPKARREVELHWRASQCPHIVRIVDV 79
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA----YI 194
+ + + + L +VME + + +S + R + + +I + + Y+
Sbjct: 80 YENLYAGRKCLL-IVMECLDGG-----ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 133
Query: 195 HTVPGVCHRDVKPQNLLVDPLTHQ--VKLCDFGSAKVLVKGEANISYICSRYYRAPELIF 252
H++ + HRDVKP+NLL +KL DFG AK GE
Sbjct: 134 HSI-NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTGE------------------ 173
Query: 253 GATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYT 312
+Y S D+WS G ++ LL G P F + + + + IR
Sbjct: 174 ---KYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--------AISPGMKTRIR-----MG 217
Query: 313 DFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 363
+ FP + W +V E L LL+ P+ R T E HP+
Sbjct: 218 QYEFPNPE---WSEV-----SEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 260
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 125/288 (43%), Gaps = 40/288 (13%)
Query: 73 PKQTISYMAERVVGTGSFGIVFQAKCLET-GETV--AIKKV--LQDRRYKNRELQ---LM 124
P I + E V+G G FG V+ L+ G+ + A+K + + D ++ L +M
Sbjct: 28 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 86
Query: 125 RLMDHPNVISLKH-CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKL- 182
+ HPNV+SL C S S + +P + L+++ P + +
Sbjct: 87 KDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLIG 138
Query: 183 YTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISY--- 239
+ Q+ +G+ ++ + V HRD+ +N ++D VK+ DFG A+ ++ E + +
Sbjct: 139 FGLQVAKGMKFLASKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMLDKEFDSVHNKT 196
Query: 240 ---ICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKV 295
+ ++ L ++TT D+WS G +L EL+ G P +P N D V ++
Sbjct: 197 GAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-- 252
Query: 296 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 343
+ R + P Y ++ WH M P +L SR+
Sbjct: 253 ------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 292
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 98/240 (40%), Gaps = 52/240 (21%)
Query: 73 PKQTISYMAERVVGTGSFGIVFQAKC-----LETGETVAIKKVLQDRRYK-----NRELQ 122
P+ I Y+ R +G G+FG VFQA+ E VA+K + ++ RE
Sbjct: 45 PRNNIEYV--RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 123 LMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKH------YSSMNQRM- 175
LM D+PN++ L LF + + E + + H +S ++ R
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 176 -------PLIYVK--LYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGS 226
PL + Q+ G+AY+ V HRD+ +N LV VK+ DFG
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFV-HRDLATRNCLVGE-NMVVKIADFGL 220
Query: 227 AKVLVKGEANISYICSRYYRA------------PELIFGATEYTTSIDIWSAGCVLAELL 274
++ + + YY+A PE IF YTT D+W+ G VL E+
Sbjct: 221 SRNIYSAD---------YYKADGNDAIPIRWMPPESIF-YNRYTTESDVWAYGVVLWEIF 270
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 49/238 (20%)
Query: 83 RVVGTGSFGIVFQAKCL----ETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNV 132
+ +G G FG V +A G T K+L++ R E +++ ++HP+V
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHV 88
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKL---------- 182
I L + S+D L L++EY Y L+ + ++++ Y+
Sbjct: 89 IKL----YGACSQDGPLL-LIVEYAK---YGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 183 --------------YTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK 228
+ +QI +G+ Y+ + + HRD+ +N+LV ++K+ DFG ++
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYLAEMK-LVHRDLAARNILVAE-GRKMKISDFGLSR 198
Query: 229 VLVKGEANISYICSRY---YRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPG 282
+ + ++ + R + A E +F YTT D+WS G +L E++ LG +PG
Sbjct: 199 DVYEEDSYVKRSQGRIPVKWMAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPG 255
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 40/288 (13%)
Query: 73 PKQTISYMAERVVGTGSFGIVFQAKCLET-GETV--AIKKV--LQDRRYKNRELQ---LM 124
P I + E V+G G FG V+ L+ G+ + A+K + + D ++ L +M
Sbjct: 45 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 103
Query: 125 RLMDHPNVISLKH-CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKL- 182
+ HPNV+SL C S S + +P + L+++ P + +
Sbjct: 104 KDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLIG 155
Query: 183 YTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE------AN 236
+ Q+ +G+ Y+ + V HRD+ +N ++D VK+ DFG A+ + E
Sbjct: 156 FGLQVAKGMKYLASKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDKEYYSVHNKT 213
Query: 237 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKV 295
+ + ++ L ++TT D+WS G +L EL+ G P +P N D V ++
Sbjct: 214 GAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-- 269
Query: 296 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 343
+ R + P Y ++ WH M P +L SR+
Sbjct: 270 ------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 309
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 104/235 (44%), Gaps = 32/235 (13%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVL----------QDRRYKNRELQLM-RLMDHPN 131
+ +G G+FG V +A G+ A+ KV ++ EL++M L H N
Sbjct: 44 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 103
Query: 132 VISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQR--MPLIYVKL--YTYQI 187
+++L T L + Y + K + +++ PL L ++ Q+
Sbjct: 104 IVNLLGA--CTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 161
Query: 188 FRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK-------VLVKGEANISYI 240
+G+A++ + HRDV +N+L+ H K+ DFG A+ +VKG A +
Sbjct: 162 AQGMAFLAS-KNCIHRDVAARNVLLTN-GHVAKIGDFGLARDIMNDSNYIVKGNARLPV- 218
Query: 241 CSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIK 294
+ APE IF YT D+WS G +L E+ LG +PG + +++K
Sbjct: 219 ---KWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 269
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 104/235 (44%), Gaps = 32/235 (13%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVL----------QDRRYKNRELQLM-RLMDHPN 131
+ +G G+FG V +A G+ A+ KV ++ EL++M L H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 132 VISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQR--MPLIYVKL--YTYQI 187
+++L T L + Y + K + +++ PL L ++ Q+
Sbjct: 112 IVNLLGA--CTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 169
Query: 188 FRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK-------VLVKGEANISYI 240
+G+A++ + HRDV +N+L+ H K+ DFG A+ +VKG A +
Sbjct: 170 AQGMAFLAS-KNCIHRDVAARNVLLTN-GHVAKIGDFGLARDIMNDSNYIVKGNARLPV- 226
Query: 241 CSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIK 294
+ APE IF YT D+WS G +L E+ LG +PG + +++K
Sbjct: 227 ---KWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 277
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 40/288 (13%)
Query: 73 PKQTISYMAERVVGTGSFGIVFQAKCLET-GETV--AIKKV--LQDRRYKNRELQ---LM 124
P I + E V+G G FG V+ L+ G+ + A+K + + D ++ L +M
Sbjct: 46 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 104
Query: 125 RLMDHPNVISLKH-CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKL- 182
+ HPNV+SL C S S + +P + L+++ P + +
Sbjct: 105 KDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLIG 156
Query: 183 YTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE------AN 236
+ Q+ +G+ Y+ + V HRD+ +N ++D VK+ DFG A+ + E
Sbjct: 157 FGLQVAKGMKYLASKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDKEYYSVHNKT 214
Query: 237 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKV 295
+ + ++ L ++TT D+WS G +L EL+ G P +P N D V ++
Sbjct: 215 GAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-- 270
Query: 296 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 343
+ R + P Y ++ WH M P +L SR+
Sbjct: 271 ------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 310
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 25/190 (13%)
Query: 187 IFRGLAYIHTVPGVCHRDVKPQNLLVD--PLTHQVKLCDFG-SAKVLVKGEAN------- 236
+ L ++H G+ HRD+KP+N+L + VK+CDF + + + G+ +
Sbjct: 120 VASALDFLHN-KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPEL 178
Query: 237 ISYICSRYYRAPELIFGATE----YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEI 292
++ S Y APE++ +E Y D+WS G +L LL G P F G D +
Sbjct: 179 LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWD- 237
Query: 293 IKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRC 352
+ P + + + + FP W + A DL S+LL R
Sbjct: 238 -RGEACPACQNMLFESIQEGKYEFPD---KDW-----AHISCAAKDLISKLLVRDAKQRL 288
Query: 353 TALEACAHPF 362
+A + HP+
Sbjct: 289 SAAQVLQHPW 298
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 26/208 (12%)
Query: 82 ERVVGTGSFGIVFQAKCLETGET---VAIKKVLQDRRYKNR-----ELQLMRLMDHPNVI 133
E+V+G G FG V G+ VAIK + K R E +M DHPNVI
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQ-RMPLIYVKLYTYQIFRGLA 192
L+ +T + ++ E++ L + N + +I + I G+
Sbjct: 98 HLEGVVTKSTP-----VMIITEFMENG---SLDSFLRQNDGQFTVIQLVGMLRGIAAGMK 149
Query: 193 YIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR------YYR 246
Y+ + V HRD+ +N+LV+ K+ DFG ++ L ++ +Y + +
Sbjct: 150 YLADMNYV-HRDLAARNILVNS-NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWT 207
Query: 247 APELIFGATEYTTSIDIWSAGCVLAELL 274
APE I ++T++ D+WS G V+ E++
Sbjct: 208 APEAI-QYRKFTSASDVWSYGIVMWEVM 234
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 40/288 (13%)
Query: 73 PKQTISYMAERVVGTGSFGIVFQAKCLET-GETV--AIKKV--LQDRRYKNRELQ---LM 124
P I + E V+G G FG V+ L+ G+ + A+K + + D ++ L +M
Sbjct: 25 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 83
Query: 125 RLMDHPNVISLKH-CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKL- 182
+ HPNV+SL C S S + +P + L+++ P + +
Sbjct: 84 KDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLIG 135
Query: 183 YTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE------AN 236
+ Q+ +G+ Y+ + V HRD+ +N ++D VK+ DFG A+ + E
Sbjct: 136 FGLQVAKGMKYLASKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDKEYYSVHNKT 193
Query: 237 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKV 295
+ + ++ L ++TT D+WS G +L EL+ G P +P N D V ++
Sbjct: 194 GAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-- 249
Query: 296 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 343
+ R + P Y ++ WH M P +L SR+
Sbjct: 250 ------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 289
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 121/290 (41%), Gaps = 44/290 (15%)
Query: 73 PKQTISYMAERVVGTGSFGIVFQAKCLET-GETV--AIKKV--LQDRRYKNRELQ---LM 124
P I + E V+G G FG V+ L+ G+ + A+K + + D ++ L +M
Sbjct: 27 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 85
Query: 125 RLMDHPNVISLKH-CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKL- 182
+ HPNV+SL C S S + +P + L+++ P + +
Sbjct: 86 KDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLIG 137
Query: 183 YTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICS 242
+ Q+ +G+ Y+ + V HRD+ +N ++D VK+ DFG A+ + E Y
Sbjct: 138 FGLQVAKGMKYLASKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDKE----YYSV 191
Query: 243 RYYRAPEL--------IFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEII 293
+L ++TT D+WS G +L EL+ G P +P N D V ++
Sbjct: 192 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 251
Query: 294 KVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 343
+ R + P Y ++ WH M P +L SR+
Sbjct: 252 --------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 291
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 40/288 (13%)
Query: 73 PKQTISYMAERVVGTGSFGIVFQAKCLET-GETV--AIKKV--LQDRRYKNRELQ---LM 124
P I + E V+G G FG V+ L+ G+ + A+K + + D ++ L +M
Sbjct: 24 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 82
Query: 125 RLMDHPNVISLKH-CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKL- 182
+ HPNV+SL C S S + +P + L+++ P + +
Sbjct: 83 KDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLIG 134
Query: 183 YTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE------AN 236
+ Q+ +G+ Y+ + V HRD+ +N ++D VK+ DFG A+ + E
Sbjct: 135 FGLQVAKGMKYLASKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDKEYYSVHNKT 192
Query: 237 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKV 295
+ + ++ L ++TT D+WS G +L EL+ G P +P N D V ++
Sbjct: 193 GAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-- 248
Query: 296 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 343
+ R + P Y ++ WH M P +L SR+
Sbjct: 249 ------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 288
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 104/252 (41%), Gaps = 62/252 (24%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVL----------QDRRYKNRELQLM-RLMDHPN 131
+ +G G+FG V +A G+ A+ KV ++ EL++M L H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 132 VISL--------------KHCFFSTTSKDELFLNLVMEYVPE-------TMYRVLKHYSS 170
+++L ++C + + V+E P R L H+SS
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSS 171
Query: 171 MNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK-- 228
Q+ +G+A++ + HRDV +N+L+ H K+ DFG A+
Sbjct: 172 ---------------QVAQGMAFLAS-KNCIHRDVAARNVLLTN-GHVAKIGDFGLARDI 214
Query: 229 -----VLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPG 282
+VKG A + + APE IF YT D+WS G +L E+ LG +PG
Sbjct: 215 MNDSNYIVKGNARLPV----KWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGLNPYPG 269
Query: 283 ENAVDQLVEIIK 294
+ +++K
Sbjct: 270 ILVNSKFYKLVK 281
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 119/292 (40%), Gaps = 48/292 (16%)
Query: 73 PKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR------------E 120
P I + E V+G G FG V+ L+ KK+ + NR E
Sbjct: 86 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 140
Query: 121 LQLMRLMDHPNVISLKH-CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIY 179
+M+ HPNV+SL C S S + +P + L+++ P +
Sbjct: 141 GIIMKDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVK 192
Query: 180 VKL-YTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+ + Q+ +G+ ++ + V HRD+ +N ++D VK+ DFG A+ + E +
Sbjct: 193 DLIGFGLQVAKGMKFLASKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDKEFDSV 250
Query: 239 Y------ICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVE 291
+ + ++ L ++TT D+WS G +L EL+ G P +P N D V
Sbjct: 251 HNKTGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 308
Query: 292 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 343
++ + R + P Y ++ WH M P +L SR+
Sbjct: 309 LL--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 350
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 40/288 (13%)
Query: 73 PKQTISYMAERVVGTGSFGIVFQAKCLET-GETV--AIKKV--LQDRRYKNRELQ---LM 124
P I + E V+G G FG V+ L+ G+ + A+K + + D ++ L +M
Sbjct: 19 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 77
Query: 125 RLMDHPNVISLKH-CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKL- 182
+ HPNV+SL C S S + +P + L+++ P + +
Sbjct: 78 KDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLIG 129
Query: 183 YTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE------AN 236
+ Q+ +G+ Y+ + V HRD+ +N ++D VK+ DFG A+ + E
Sbjct: 130 FGLQVAKGMKYLASKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDKEYYSVHNKT 187
Query: 237 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKV 295
+ + ++ L ++TT D+WS G +L EL+ G P +P N D V ++
Sbjct: 188 GAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-- 243
Query: 296 LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 343
+ R + P Y ++ WH M P +L SR+
Sbjct: 244 ------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 283
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 121/290 (41%), Gaps = 44/290 (15%)
Query: 73 PKQTISYMAERVVGTGSFGIVFQAKCLET-GETV--AIKKV--LQDRRYKNRELQ---LM 124
P I + E V+G G FG V+ L+ G+ + A+K + + D ++ L +M
Sbjct: 22 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 80
Query: 125 RLMDHPNVISLKH-CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKL- 182
+ HPNV+SL C S S + +P + L+++ P + +
Sbjct: 81 KDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLIG 132
Query: 183 YTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICS 242
+ Q+ +G+ Y+ + V HRD+ +N ++D VK+ DFG A+ + E Y
Sbjct: 133 FGLQVAKGMKYLASKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDKE----YYSV 186
Query: 243 RYYRAPEL--------IFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEII 293
+L ++TT D+WS G +L EL+ G P +P N D V ++
Sbjct: 187 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 246
Query: 294 KVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 343
+ R + P Y ++ WH M P +L SR+
Sbjct: 247 --------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 286
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 121/290 (41%), Gaps = 44/290 (15%)
Query: 73 PKQTISYMAERVVGTGSFGIVFQAKCLET-GETV--AIKKV--LQDRRYKNRELQ---LM 124
P I + E V+G G FG V+ L+ G+ + A+K + + D ++ L +M
Sbjct: 26 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 84
Query: 125 RLMDHPNVISLKH-CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKL- 182
+ HPNV+SL C S S + +P + L+++ P + +
Sbjct: 85 KDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLIG 136
Query: 183 YTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICS 242
+ Q+ +G+ Y+ + V HRD+ +N ++D VK+ DFG A+ + E Y
Sbjct: 137 FGLQVAKGMKYLASKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDKE----YYSV 190
Query: 243 RYYRAPEL--------IFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEII 293
+L ++TT D+WS G +L EL+ G P +P N D V ++
Sbjct: 191 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 250
Query: 294 KVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 343
+ R + P Y ++ WH M P +L SR+
Sbjct: 251 --------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 290
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 121/290 (41%), Gaps = 44/290 (15%)
Query: 73 PKQTISYMAERVVGTGSFGIVFQAKCLET-GETV--AIKKV--LQDRRYKNRELQ---LM 124
P I + E V+G G FG V+ L+ G+ + A+K + + D ++ L +M
Sbjct: 27 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIM 85
Query: 125 RLMDHPNVISLKH-CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKL- 182
+ HPNV+SL C S S + +P + L+++ P + +
Sbjct: 86 KDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVKDLIG 137
Query: 183 YTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICS 242
+ Q+ +G+ Y+ + V HRD+ +N ++D VK+ DFG A+ + E Y
Sbjct: 138 FGLQVAKGMKYLASKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDKE----YYSV 191
Query: 243 RYYRAPEL--------IFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEII 293
+L ++TT D+WS G +L EL+ G P +P N D V ++
Sbjct: 192 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 251
Query: 294 KVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 343
+ R + P Y ++ WH M P +L SR+
Sbjct: 252 --------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 291
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 119/292 (40%), Gaps = 48/292 (16%)
Query: 73 PKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR------------E 120
P I + E V+G G FG V+ L+ KK+ + NR E
Sbjct: 32 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 86
Query: 121 LQLMRLMDHPNVISLKH-CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIY 179
+M+ HPNV+SL C S S + +P + L+++ P +
Sbjct: 87 GIIMKDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVK 138
Query: 180 VKL-YTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+ + Q+ +G+ ++ + V HRD+ +N ++D VK+ DFG A+ + E +
Sbjct: 139 DLIGFGLQVAKGMKFLASKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDKEFDSV 196
Query: 239 Y------ICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVE 291
+ + ++ L ++TT D+WS G +L EL+ G P +P N D V
Sbjct: 197 HNKTGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 254
Query: 292 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 343
++ + R + P Y ++ WH M P +L SR+
Sbjct: 255 LL--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 296
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 119/292 (40%), Gaps = 48/292 (16%)
Query: 73 PKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR------------E 120
P I + E V+G G FG V+ L+ KK+ + NR E
Sbjct: 28 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 82
Query: 121 LQLMRLMDHPNVISLKH-CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIY 179
+M+ HPNV+SL C S S + +P + L+++ P +
Sbjct: 83 GIIMKDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVK 134
Query: 180 VKL-YTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+ + Q+ +G+ ++ + V HRD+ +N ++D VK+ DFG A+ + E +
Sbjct: 135 DLIGFGLQVAKGMKFLASKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDKEFDSV 192
Query: 239 Y------ICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVE 291
+ + ++ L ++TT D+WS G +L EL+ G P +P N D V
Sbjct: 193 HNKTGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 250
Query: 292 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 343
++ + R + P Y ++ WH M P +L SR+
Sbjct: 251 LL--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 292
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 119/292 (40%), Gaps = 48/292 (16%)
Query: 73 PKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR------------E 120
P I + E V+G G FG V+ L+ KK+ + NR E
Sbjct: 27 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 81
Query: 121 LQLMRLMDHPNVISLKH-CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIY 179
+M+ HPNV+SL C S S + +P + L+++ P +
Sbjct: 82 GIIMKDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVK 133
Query: 180 VKL-YTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+ + Q+ +G+ ++ + V HRD+ +N ++D VK+ DFG A+ + E +
Sbjct: 134 DLIGFGLQVAKGMKFLASKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDKEFDSV 191
Query: 239 Y------ICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVE 291
+ + ++ L ++TT D+WS G +L EL+ G P +P N D V
Sbjct: 192 HNKTGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 249
Query: 292 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 343
++ + R + P Y ++ WH M P +L SR+
Sbjct: 250 LL--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 291
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 119/292 (40%), Gaps = 48/292 (16%)
Query: 73 PKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR------------E 120
P I + E V+G G FG V+ L+ KK+ + NR E
Sbjct: 27 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 81
Query: 121 LQLMRLMDHPNVISLKH-CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIY 179
+M+ HPNV+SL C S S + +P + L+++ P +
Sbjct: 82 GIIMKDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVK 133
Query: 180 VKL-YTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+ + Q+ +G+ ++ + V HRD+ +N ++D VK+ DFG A+ + E +
Sbjct: 134 DLIGFGLQVAKGMKFLASKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDKEFDSV 191
Query: 239 Y------ICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVE 291
+ + ++ L ++TT D+WS G +L EL+ G P +P N D V
Sbjct: 192 HNKTGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 249
Query: 292 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 343
++ + R + P Y ++ WH M P +L SR+
Sbjct: 250 LL--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 291
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 119/292 (40%), Gaps = 48/292 (16%)
Query: 73 PKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNR------------E 120
P I + E V+G G FG V+ L+ KK+ + NR E
Sbjct: 25 PSSLIVHFNE-VIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTE 79
Query: 121 LQLMRLMDHPNVISLKH-CFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIY 179
+M+ HPNV+SL C S S + +P + L+++ P +
Sbjct: 80 GIIMKDFSHPNVLSLLGICLRSEGSP--------LVVLPYMKHGDLRNFIRNETHNPTVK 131
Query: 180 VKL-YTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANIS 238
+ + Q+ +G+ ++ + V HRD+ +N ++D VK+ DFG A+ + E +
Sbjct: 132 DLIGFGLQVAKGMKFLASKKFV-HRDLAARNCMLDE-KFTVKVADFGLARDMYDKEFDSV 189
Query: 239 Y------ICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVE 291
+ + ++ L ++TT D+WS G +L EL+ G P +P N D V
Sbjct: 190 HNKTGAKLPVKWMALESL--QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 247
Query: 292 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL 343
++ + R + P Y ++ WH M P +L SR+
Sbjct: 248 LL--------QGRRLLQPEYCPDPLYEVMLKCWHP--KAEMRPSFSELVSRI 289
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 107/261 (40%), Gaps = 71/261 (27%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVL----------QDRRYKNRELQLM-RLMDHPN 131
+ +G G+FG V +A G+ A+ KV ++ EL++M L H N
Sbjct: 37 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 96
Query: 132 VISL--------------KHC-------FFSTTSKDELFLNLVMEYVPETM--------- 161
+++L ++C F ++ L +L PE +
Sbjct: 97 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLE 156
Query: 162 YRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKL 221
R L H+SS Q+ +G+A++ + HRDV +N+L+ H K+
Sbjct: 157 LRDLLHFSS---------------QVAQGMAFLAS-KNCIHRDVAARNVLLTN-GHVAKI 199
Query: 222 CDFGSAK-------VLVKGEANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL 274
DFG A+ +VKG A + + APE IF YT D+WS G +L E+
Sbjct: 200 GDFGLARDIMNDSNYIVKGNARLPV----KWMAPESIFDCV-YTVQSDVWSYGILLWEIF 254
Query: 275 -LGQPLFPGENAVDQLVEIIK 294
LG +PG + +++K
Sbjct: 255 SLGLNPYPGILVNSKFYKLVK 275
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 106/266 (39%), Gaps = 81/266 (30%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLM---------DHPNVI 133
+ +G G FG+VF+AK AIK++ R NREL ++M +HP ++
Sbjct: 12 QCMGRGGFGVVFEAKNKVDDCNYAIKRI----RLPNRELAREKVMREVKALAKLEHPGIV 67
Query: 134 SLKHCFFSTTSK------DELFL-NLVMEY---------VPETMYRVLKHYSSMNQ---- 173
+ + T + DE++L + ++ P R + +S+ N
Sbjct: 68 RYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQL 127
Query: 174 --RMPLIY-----------------------------VKLYTY-QIFRGLAYIHTVPGVC 201
P +Y V L+ + QI + ++H+ G+
Sbjct: 128 QPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHS-KGLM 186
Query: 202 HRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE-------------ANISYICSRYYRAP 248
HRD+KP N+ + VK+ DFG + + E + + ++ Y +P
Sbjct: 187 HRDLKPSNIFFT-MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSP 245
Query: 249 ELIFGATEYTTSIDIWSAGCVLAELL 274
E I G Y+ +DI+S G +L ELL
Sbjct: 246 EQIHG-NNYSHKVDIFSLGLILFELL 270
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 100/248 (40%), Gaps = 55/248 (22%)
Query: 82 ERVVGTGSFGIVFQAKCLETGET-----VAIKKV----LQDRRYKNRELQLMRLMDHPNV 132
+R +G G+FG VF A+C T VA+K + L R+ RE +L+ + H ++
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHI 79
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYV-------------PETMYRVLKHYSSMNQRMPLIY 179
+ F D L +V EY+ P+ M V + L
Sbjct: 80 VK-----FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 134
Query: 180 VKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISY 239
+ QI G+ Y+ + V HRD+ +N LV VK+ DFG ++
Sbjct: 135 MLHIASQIASGMVYLASQHFV-HRDLATRNCLVGA-NLLVKIGDFGMSR---------DV 183
Query: 240 ICSRYYRA------------PELIFGATEYTTSIDIWSAGCVLAELLL--GQPLFPGENA 285
+ YYR PE I ++TT D+WS G +L E+ QP F N
Sbjct: 184 YSTDYYRVGGHTMLPIRWMPPESIM-YRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT 242
Query: 286 VDQLVEII 293
+++E I
Sbjct: 243 --EVIECI 248
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 41/220 (18%)
Query: 82 ERVVGTGSFGIVFQAKCLETG--ETVAIKKVLQ-----DRRYKNRELQLM-RLMDHPNVI 133
+ V+G G+FG V +A+ + G AIK++ + D R EL+++ +L HPN+I
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP----------------ETMYRVLKHYSSMNQRMPL 177
+L + +L L +EY P + + + +S L
Sbjct: 90 NL-----LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 178 IYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK---VLVKGE 234
++ + + RG+ Y+ + HRD+ +N+LV + K+ DFG ++ V VK
Sbjct: 145 LH---FAADVARGMDYL-SQKQFIHRDLAARNILVGE-NYVAKIADFGLSRGQEVYVK-- 197
Query: 235 ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL 274
+ + R+ L + YTT+ D+WS G +L E++
Sbjct: 198 KTMGRLPVRWMAIESLNYSV--YTTNSDVWSYGVLLWEIV 235
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 128/347 (36%), Gaps = 60/347 (17%)
Query: 84 VVGTG--SFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISL 135
V+G G V A+ TGE V ++++ + + EL + +L +HPN++
Sbjct: 32 VIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPY 91
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
+ F + +EL++ + H+ + + Y+ + + L YIH
Sbjct: 92 RATFI---ADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYI---LQGVLKALDYIH 145
Query: 196 TVPGVCHRDVKPQNLLV--------DPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRA 247
+ G HR VK ++L+ L + + G + +V S +
Sbjct: 146 HM-GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSP 204
Query: 248 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT--------- 298
L Y DI+S G EL G F A L+E K+ GT
Sbjct: 205 EVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLE--KLNGTVPCLLDTST 262
Query: 299 ---------PTR--------EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLAS 341
P+R + + P ++ P +HP+H+ F P
Sbjct: 263 IPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSP---SHPYHRTF----SPHFHHFVE 315
Query: 342 RLLQYSPSLRCTALEACAHPFFDEL-REPNARLPN-GRPFPPLFNFK 386
+ LQ +P R +A H FF ++ R + LP RP P+ NF+
Sbjct: 316 QCLQRNPDARPSASTLLNHSFFKQIKRRASEALPELLRPVTPITNFE 362
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 128/347 (36%), Gaps = 60/347 (17%)
Query: 84 VVGTG--SFGIVFQAKCLETGETVAIKKVLQDR------RYKNRELQLMRLMDHPNVISL 135
V+G G V A+ TGE V ++++ + + EL + +L +HPN++
Sbjct: 16 VIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPY 75
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
+ F + +EL++ + H+ + + Y+ + + L YIH
Sbjct: 76 RATFI---ADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYI---LQGVLKALDYIH 129
Query: 196 TVPGVCHRDVKPQNLLV--------DPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRA 247
+ G HR VK ++L+ L + + G + +V S +
Sbjct: 130 HM-GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSP 188
Query: 248 PELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT--------- 298
L Y DI+S G EL G F A L+E K+ GT
Sbjct: 189 EVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLE--KLNGTVPCLLDTST 246
Query: 299 ---------PTR--------EEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLAS 341
P+R + + P ++ P +HP+H+ F P
Sbjct: 247 IPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSP---SHPYHRTF----SPHFHHFVE 299
Query: 342 RLLQYSPSLRCTALEACAHPFFDEL-REPNARLPN-GRPFPPLFNFK 386
+ LQ +P R +A H FF ++ R + LP RP P+ NF+
Sbjct: 300 QCLQRNPDARPSASTLLNHSFFKQIKRRASEALPELLRPVTPITNFE 346
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 95/212 (44%), Gaps = 34/212 (16%)
Query: 80 MAERVVGTGSFGIVFQA--KCLETGETVAIKKVLQ-----DRRYKNRELQLMRLMDHPNV 132
+A+ +G G+FG V Q + + VAIK + Q D RE Q+M +D+P +
Sbjct: 13 IADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYI 72
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYV---PETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
+ L + L LVME P + V K + +P+ V +Q+
Sbjct: 73 VRL----IGVCQAEALM--LVMEMAGGGPLHKFLVGKR-----EEIPVSNVAELLHQVSM 121
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY----- 244
G+ Y+ HRD+ +N+L+ H K+ DFG +K L A+ SY +R
Sbjct: 122 GMKYLEE-KNFVHRDLAARNVLLVN-RHYAKISDFGLSKAL---GADDSYYTARSAGKWP 176
Query: 245 --YRAPELIFGATEYTTSIDIWSAGCVLAELL 274
+ APE I ++++ D+WS G + E L
Sbjct: 177 LKWYAPECI-NFRKFSSRSDVWSYGVTMWEAL 207
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 41/220 (18%)
Query: 82 ERVVGTGSFGIVFQAKCLETG--ETVAIKKVLQ-----DRRYKNRELQLM-RLMDHPNVI 133
+ V+G G+FG V +A+ + G AIK++ + D R EL+++ +L HPN+I
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP----------------ETMYRVLKHYSSMNQRMPL 177
+L + +L L +EY P + + + +S L
Sbjct: 80 NL-----LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 178 IYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK---VLVKGE 234
++ + + RG+ Y+ + HRD+ +N+LV + K+ DFG ++ V VK
Sbjct: 135 LH---FAADVARGMDYLSQKQFI-HRDLAARNILVGE-NYVAKIADFGLSRGQEVYVK-- 187
Query: 235 ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL 274
+ + R+ L + YTT+ D+WS G +L E++
Sbjct: 188 KTMGRLPVRWMAIESLNYSV--YTTNSDVWSYGVLLWEIV 225
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 36/213 (16%)
Query: 80 MAERVVGTGSFGIVFQA--KCLETGETVAIKKVLQ-----DRRYKNRELQLMRLMDHPNV 132
+A+ +G G+FG V Q + + VAIK + Q D RE Q+M +D+P +
Sbjct: 339 IADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYI 398
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYV---PETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
+ L + L LVME P + V K + +P+ V +Q+
Sbjct: 399 VRL----IGVCQAEALM--LVMEMAGGGPLHKFLVGK-----REEIPVSNVAELLHQVSM 447
Query: 190 GLAYIHTVPGVCHRDVKPQN-LLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---- 244
G+ Y+ HR++ +N LLV+ H K+ DFG +K L A+ SY +R
Sbjct: 448 GMKYLEE-KNFVHRNLAARNVLLVN--RHYAKISDFGLSKAL---GADDSYYTARSAGKW 501
Query: 245 ---YRAPELIFGATEYTTSIDIWSAGCVLAELL 274
+ APE I ++++ D+WS G + E L
Sbjct: 502 PLKWYAPECI-NFRKFSSRSDVWSYGVTMWEAL 533
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 82 ERVVGTGSFGIVFQAKCLETGET---VAIKKVLQDRRYKNR-----ELQLMRLMDHPNVI 133
E+V+G G FG V G+ VAIK + K R E +M DHPNVI
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQ-RMPLIYVKLYTYQIFRGLA 192
L+ +T + ++ E++ L + N + +I + I G+
Sbjct: 72 HLEGVVTKSTP-----VMIITEFMENG---SLDSFLRQNDGQFTVIQLVGMLRGIAAGMK 123
Query: 193 YIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR------YYR 246
Y+ + V HR + +N+LV+ K+ DFG ++ L ++ +Y + +
Sbjct: 124 YLADMNYV-HRALAARNILVNS-NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWT 181
Query: 247 APELIFGATEYTTSIDIWSAGCVLAELL 274
APE I ++T++ D+WS G V+ E++
Sbjct: 182 APEAI-QYRKFTSASDVWSYGIVMWEVM 208
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 132/344 (38%), Gaps = 68/344 (19%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPN 131
Y + +G+G VFQ E + AIK V + Y+N L +L H +
Sbjct: 58 YSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 132 VISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGL 191
I + + T + ++ +VME + LK S++ Y K L
Sbjct: 117 KIIRLYDYEIT----DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWK-------NML 165
Query: 192 AYIHTVP--GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI---SYICSRYYR 246
+HT+ G+ H D+KP N L+ + +KL DFG A + ++ S + + Y
Sbjct: 166 EAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 247 APELIFGATE----------YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 296
PE I + + D+WS GC+L + G+ P + ++Q+ ++ ++
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAII 281
Query: 297 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL---LQYSPSLRCT 353
+PN+ + FP I PE DL L L+ P R +
Sbjct: 282 -----------DPNH-EIEFPDI--------------PEK-DLQDVLKCCLKRDPKQRIS 314
Query: 354 ALEACAHPFFDELREPNARLPNGRPFPPLFNFKQELAGASPELI 397
E AHP+ P ++ G + Q + SP I
Sbjct: 315 IPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSI 358
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 79/163 (48%), Gaps = 16/163 (9%)
Query: 72 EPKQTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL----QLMRLM 127
EP+ + R +G+GSFG ++ ++T E VAIK L++ + K+ +L ++ R++
Sbjct: 2 EPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK--LENVKTKHPQLLYESKIYRIL 59
Query: 128 DHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQI 187
I F + L ++L+ + + ++ ++++ L V + Q+
Sbjct: 60 QGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDL-------FNFCSRKLSLKTVLMLADQM 112
Query: 188 FRGLAYIHTVPGVCHRDVKPQNLL--VDPLTHQVKLCDFGSAK 228
+ ++H+ HRD+KP N L + +QV + DFG AK
Sbjct: 113 INRVEFVHS-KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 127/323 (39%), Gaps = 68/323 (21%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPN 131
Y + +G+G VFQ E + AIK V + Y+N L +L H +
Sbjct: 58 YSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 132 VISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMN--QRMPLIYVKLYTYQIFR 189
I + + T + ++ +VME + LK S++ +R K Y +
Sbjct: 117 KIIRLYDYEIT----DQYIYMVMECGNIDLNSWLKKKKSIDPWER------KSYWKNMLE 166
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI---SYICSRYYR 246
+ IH G+ H D+KP N L+ + +KL DFG A + ++ S + + Y
Sbjct: 167 AVHTIHQ-HGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 247 APELIFGATE----------YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 296
PE I + + D+WS GC+L + G+ P + ++Q+ ++ ++
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAII 281
Query: 297 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL---LQYSPSLRCT 353
+PN+ + FP I PE DL L L+ P R +
Sbjct: 282 -----------DPNH-EIEFPDI--------------PEK-DLQDVLKCCLKRDPKQRIS 314
Query: 354 ALEACAHPFFDELREPNARLPNG 376
E AHP+ P ++ G
Sbjct: 315 IPELLAHPYVQIQTHPVNQMAKG 337
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 132/344 (38%), Gaps = 68/344 (19%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPN 131
Y + +G+G VFQ E + AIK V + Y+N L +L H +
Sbjct: 58 YSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 132 VISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGL 191
I + + T + ++ +VME + LK S++ Y K L
Sbjct: 117 KIIRLYDYEIT----DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWK-------NML 165
Query: 192 AYIHTVP--GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI---SYICSRYYR 246
+HT+ G+ H D+KP N L+ + +KL DFG A + ++ S + + Y
Sbjct: 166 EAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYM 223
Query: 247 APELIFGATE----------YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 296
PE I + + D+WS GC+L + G+ P + ++Q+ ++ ++
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAII 281
Query: 297 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL---LQYSPSLRCT 353
+PN+ + FP I PE DL L L+ P R +
Sbjct: 282 -----------DPNH-EIEFPDI--------------PEK-DLQDVLKCCLKRDPKQRIS 314
Query: 354 ALEACAHPFFDELREPNARLPNGRPFPPLFNFKQELAGASPELI 397
E AHP+ P ++ G + Q + SP I
Sbjct: 315 IPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSI 358
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 41/220 (18%)
Query: 82 ERVVGTGSFGIVFQAKCLETG--ETVAIKKVLQ-----DRRYKNRELQLM-RLMDHPNVI 133
+ V+G G+FG V +A+ + G AIK++ + D R EL+++ +L HPN+I
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVP----------------ETMYRVLKHYSSMNQRMPL 177
+L + +L L +EY P + + + +S L
Sbjct: 87 NL-----LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 178 IYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK---VLVKGE 234
++ + + RG+ Y+ + HR++ +N+LV + K+ DFG ++ V VK
Sbjct: 142 LH---FAADVARGMDYL-SQKQFIHRNLAARNILVGE-NYVAKIADFGLSRGQEVYVK-- 194
Query: 235 ANISYICSRYYRAPELIFGATEYTTSIDIWSAGCVLAELL 274
+ + R+ L + YTT+ D+WS G +L E++
Sbjct: 195 KTMGRLPVRWMAIESLNYSV--YTTNSDVWSYGVLLWEIV 232
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 132/344 (38%), Gaps = 68/344 (19%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPN 131
Y + +G+G VFQ E + AIK V + Y+N L +L H +
Sbjct: 11 YSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69
Query: 132 VISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGL 191
I + + T + ++ +VME + LK S++ Y K L
Sbjct: 70 KIIRLYDYEIT----DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWK-------NML 118
Query: 192 AYIHTVP--GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI---SYICSRYYR 246
+HT+ G+ H D+KP N L+ + +KL DFG A + ++ S + + Y
Sbjct: 119 EAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 176
Query: 247 APELIFGATE----------YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 296
PE I + + D+WS GC+L + G+ P + ++Q+ ++ ++
Sbjct: 177 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAII 234
Query: 297 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL---LQYSPSLRCT 353
+PN+ + FP I PE DL L L+ P R +
Sbjct: 235 -----------DPNH-EIEFPDI--------------PEK-DLQDVLKCCLKRDPKQRIS 267
Query: 354 ALEACAHPFFDELREPNARLPNGRPFPPLFNFKQELAGASPELI 397
E AHP+ P ++ G + Q + SP I
Sbjct: 268 IPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSI 311
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 126/323 (39%), Gaps = 68/323 (21%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPN 131
Y + +G+G VFQ E + AIK V + Y+N L +L H +
Sbjct: 30 YSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 132 VISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGL 191
I + + T + ++ +VME + LK S++ Y K L
Sbjct: 89 KIIRLYDYEIT----DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWK-------NML 137
Query: 192 AYIHTVP--GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI---SYICSRYYR 246
+HT+ G+ H D+KP N L+ + +KL DFG A + ++ S + + Y
Sbjct: 138 EAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 195
Query: 247 APELIFGATE----------YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 296
PE I + + D+WS GC+L + G+ P + ++Q+ ++ ++
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAII 253
Query: 297 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL---LQYSPSLRCT 353
+PN+ + FP I PE DL L L+ P R +
Sbjct: 254 -----------DPNH-EIEFPDI--------------PEK-DLQDVLKCCLKRDPKQRIS 286
Query: 354 ALEACAHPFFDELREPNARLPNG 376
E AHP+ P ++ G
Sbjct: 287 IPELLAHPYVQIQTHPVNQMAKG 309
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 133/344 (38%), Gaps = 68/344 (19%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPN 131
Y + +G+G VFQ E + AIK V + Y+N L +L H +
Sbjct: 14 YSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 72
Query: 132 VISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMN--QRMPLIYVKLYTYQIFR 189
I + + T + ++ +VME + LK S++ +R K Y +
Sbjct: 73 KIIRLYDYEIT----DQYIYMVMECGNIDLNSWLKKKKSIDPWER------KSYWKNMLE 122
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI---SYICSRYYR 246
+ IH G+ H D+KP N L+ + +KL DFG A + ++ S + + Y
Sbjct: 123 AVHTIHQ-HGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 179
Query: 247 APELIFGATE----------YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 296
PE I + + D+WS GC+L + G+ P + ++Q+ ++ ++
Sbjct: 180 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAII 237
Query: 297 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL---LQYSPSLRCT 353
+PN+ + FP I PE DL L L+ P R +
Sbjct: 238 -----------DPNH-EIEFPDI--------------PEK-DLQDVLKCCLKRDPKQRIS 270
Query: 354 ALEACAHPFFDELREPNARLPNGRPFPPLFNFKQELAGASPELI 397
E AHP+ P ++ G + Q + SP I
Sbjct: 271 IPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSI 314
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 201 CHRDVKPQNLLV--DPLTHQVKLCDFGSAKVLVKGEANI--SYICSRYYRAPELIFGATE 256
HRDVKP+N+LV D + L DFG A + + + + YY APE F +
Sbjct: 156 THRDVKPENILVSADDFAY---LVDFGIASATTDEKLTQLGNTVGTLYYXAPER-FSESH 211
Query: 257 YTTSIDIWSAGCVLAELLLGQPLFPGEN 284
T DI++ CVL E L G P + G+
Sbjct: 212 ATYRADIYALTCVLYECLTGSPPYQGDQ 239
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 127/323 (39%), Gaps = 68/323 (21%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPN 131
Y + +G+G VFQ E + AIK V + Y+N L +L H +
Sbjct: 10 YSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 68
Query: 132 VISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMN--QRMPLIYVKLYTYQIFR 189
I + + T + ++ +VME + LK S++ +R K Y +
Sbjct: 69 KIIRLYDYEIT----DQYIYMVMECGNIDLNSWLKKKKSIDPWER------KSYWKNMLE 118
Query: 190 GLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI---SYICSRYYR 246
+ IH G+ H D+KP N L+ + +KL DFG A + ++ S + + Y
Sbjct: 119 AVHTIHQ-HGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 175
Query: 247 APELIFGATE----------YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 296
PE I + + D+WS GC+L + G+ P + ++Q+ ++ ++
Sbjct: 176 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAII 233
Query: 297 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL---LQYSPSLRCT 353
+PN+ + FP I PE DL L L+ P R +
Sbjct: 234 -----------DPNH-EIEFPDI--------------PEK-DLQDVLKCCLKRDPKQRIS 266
Query: 354 ALEACAHPFFDELREPNARLPNG 376
E AHP+ P ++ G
Sbjct: 267 IPELLAHPYVQIQTHPVNQMAKG 289
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 34/229 (14%)
Query: 85 VGTGSFGIVFQAKC-LETGETVAIK------KVLQDRRYKN---RELQLMRLMDHPNVIS 134
+G GSFG+V + + +G+TV++ VL + RE+ M +DH N+I
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 135 LKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
L + K +V E P + R+ KH L + Y Q+ G+
Sbjct: 86 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQG----HFLLGTLSRYAVQVAEGMG 135
Query: 193 YIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYR------ 246
Y+ + + HRD+ +NLL+ VK+ DFG + L + + + Y+ + +
Sbjct: 136 YLESKRFI-HRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDH--YVMQEHRKVPFAWC 191
Query: 247 APELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIK 294
APE + T ++ + D W G L E+ GQ + G N L +I K
Sbjct: 192 APESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 239
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 125/323 (38%), Gaps = 68/323 (21%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDR-------RYKNRELQLMRLMDHPN 131
Y + +G+G VFQ E + AIK V + Y+N L +L H +
Sbjct: 30 YSILKQIGSGGSSKVFQV-LNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 132 VISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGL 191
I + + T + ++ +VME + LK S++ Y K L
Sbjct: 89 KIIRLYDYEIT----DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWK-------NML 137
Query: 192 AYIHTVP--GVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANI---SYICSRYYR 246
+HT+ G+ H D+KP N L+ + +KL DFG A + + S + + Y
Sbjct: 138 EAVHTIHQHGIVHSDLKPANFLI--VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYM 195
Query: 247 APELIFGATE----------YTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVL 296
PE I + + D+WS GC+L + G+ P + ++Q+ ++ ++
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAII 253
Query: 297 GTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRL---LQYSPSLRCT 353
+PN+ + FP I PE DL L L+ P R +
Sbjct: 254 -----------DPNH-EIEFPDI--------------PEK-DLQDVLKCCLKRDPKQRIS 286
Query: 354 ALEACAHPFFDELREPNARLPNG 376
E AHP+ P ++ G
Sbjct: 287 IPELLAHPYVQIQTHPVNQMAKG 309
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 34/229 (14%)
Query: 85 VGTGSFGIVFQAKC-LETGETVAIK------KVLQDRRYKN---RELQLMRLMDHPNVIS 134
+G GSFG+V + + +G+TV++ VL + RE+ M +DH N+I
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 135 LKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
L + K +V E P + R+ KH L + Y Q+ G+
Sbjct: 80 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQG----HFLLGTLSRYAVQVAEGMG 129
Query: 193 YIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYR------ 246
Y+ + + HRD+ +NLL+ VK+ DFG + L + + + Y+ + +
Sbjct: 130 YLESKRFI-HRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDH--YVMQEHRKVPFAWC 185
Query: 247 APELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIK 294
APE + T ++ + D W G L E+ GQ + G N L +I K
Sbjct: 186 APESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 34/229 (14%)
Query: 85 VGTGSFGIVFQAKC-LETGETVAIK------KVLQDRRYKN---RELQLMRLMDHPNVIS 134
+G GSFG+V + + +G+TV++ VL + RE+ M +DH N+I
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 135 LKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
L + K +V E P + R+ KH L + Y Q+ G+
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQG----HFLLGTLSRYAVQVAEGMG 125
Query: 193 YIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYR------ 246
Y+ + + HRD+ +NLL+ VK+ DFG + L + + + Y+ + +
Sbjct: 126 YLESKRFI-HRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDH--YVMQEHRKVPFAWC 181
Query: 247 APELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIK 294
APE + T ++ + D W G L E+ GQ + G N L +I K
Sbjct: 182 APESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 34/229 (14%)
Query: 85 VGTGSFGIVFQAKC-LETGETVAIK------KVLQDRRYKN---RELQLMRLMDHPNVIS 134
+G GSFG+V + + +G+TV++ VL + RE+ M +DH N+I
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 135 LKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
L + K +V E P + R+ KH L + Y Q+ G+
Sbjct: 80 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQG----HFLLGTLSRYAVQVAEGMG 129
Query: 193 YIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYR------ 246
Y+ + + HRD+ +NLL+ VK+ DFG + L + + + Y+ + +
Sbjct: 130 YLESKRFI-HRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDH--YVMQEHRKVPFAWC 185
Query: 247 APELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIK 294
APE + T ++ + D W G L E+ GQ + G N L +I K
Sbjct: 186 APESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 233
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 30/227 (13%)
Query: 85 VGTGSFGIVFQAKC-LETGETVAIK------KVLQDRRYKN---RELQLMRLMDHPNVIS 134
+G GSFG+V + + +G+TV++ VL + RE+ M +DH N+I
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 135 LKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
L + K +V E P + R+ KH L + Y Q+ G+
Sbjct: 86 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQG----HFLLGTLSRYAVQVAEGMG 135
Query: 193 YIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR----YYRAP 248
Y+ + + HRD+ +NLL+ VK+ DFG + L + + + R + AP
Sbjct: 136 YLESKRFI-HRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 193
Query: 249 ELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIK 294
E + T ++ + D W G L E+ GQ + G N L +I K
Sbjct: 194 ESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 239
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 34/229 (14%)
Query: 85 VGTGSFGIVFQAKC-LETGETVAIK------KVLQDRRYKN---RELQLMRLMDHPNVIS 134
+G GSFG+V + + +G+TV++ VL + RE+ M +DH N+I
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 135 LKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
L + K +V E P + R+ KH L + Y Q+ G+
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQG----HFLLGTLSRYAVQVAEGMG 125
Query: 193 YIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYR------ 246
Y+ + + HRD+ +NLL+ VK+ DFG + L + + + Y+ + +
Sbjct: 126 YLESKRFI-HRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDH--YVMQEHRKVPFAWC 181
Query: 247 APELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIK 294
APE + T ++ + D W G L E+ GQ + G N L +I K
Sbjct: 182 APESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 30/227 (13%)
Query: 85 VGTGSFGIVFQAKC-LETGETVAIK------KVLQDRRYKN---RELQLMRLMDHPNVIS 134
+G GSFG+V + + +G+TV++ VL + RE+ M +DH N+I
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 135 LKHCFFSTTSKDELFLNLVMEYVP--ETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
L + K +V E P + R+ KH L + Y Q+ G+
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQG----HFLLGTLSRYAVQVAEGMG 125
Query: 193 YIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR----YYRAP 248
Y+ + + HRD+ +NLL+ VK+ DFG + L + + + R + AP
Sbjct: 126 YLESKRFI-HRDLAARNLLL-ATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 183
Query: 249 ELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIK 294
E + T ++ + D W G L E+ GQ + G N L +I K
Sbjct: 184 ESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 32/209 (15%)
Query: 88 GSFGIVFQAKCLETGETVAIKKV-LQDRRYKNRELQLMRL--MDHPNVISLKHCFFSTTS 144
G FG V++A+ + + VA+K LQD++ E ++ M H N++ F +
Sbjct: 26 GRFGCVWKAQLM--NDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQ----FIAAEK 79
Query: 145 KDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKL--YTYQIFRGLAYIHT------ 196
+ NL +E T + + + + + +L + RGL+Y+H
Sbjct: 80 RGS---NLEVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCR 136
Query: 197 ----VPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE---ANISYICSRYYRAPE 249
P + HRD K +N+L+ V L DFG A G+ + +R Y APE
Sbjct: 137 GEGHKPSIAHRDFKSKNVLLKSDLTAV-LADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE 195
Query: 250 LIFGATEYTTS----IDIWSAGCVLAELL 274
++ GA + ID+++ G VL EL+
Sbjct: 196 VLEGAINFQRDAFLRIDMYAMGLVLWELV 224
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 25/209 (11%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQ----DRRYKN-RELQLMRLMDHPNVISLKHCF 139
+G G+FG VF + VA+K + D + K +E ++++ HPN++ L
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL---I 178
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
T K ++ +VME V + L + R+ + + G+ Y+ +
Sbjct: 179 GVCTQKQPIY--IVMELVQGGDF--LTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC 234
Query: 200 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATE--- 256
+ HRD+ +N LV + +K+ DFG + + EA+ Y S R + + A E
Sbjct: 235 I-HRDLAARNCLVTE-KNVLKISDFG----MSREEADGVYAASGGLRQVPVKWTAPEALN 288
Query: 257 ---YTTSIDIWSAGCVLAELL-LGQPLFP 281
Y++ D+WS G +L E LG +P
Sbjct: 289 YGRYSSESDVWSFGILLWETFSLGASPYP 317
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 129/312 (41%), Gaps = 65/312 (20%)
Query: 83 RVVGTGSFGIVFQ--AKCLETGET---VAIKKVLQDRRYKNRELQLMRLMDHPNVISLKH 137
R +G GSFG+V++ A+ + GE VA+K V + + R + ++ +V+
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER----IEFLNEASVMKGFT 78
Query: 138 C-----FFSTTSKDELFLNLVMEYVP----ETMYRVLKHYSSMNQRMP---LIYVKLYTY 185
C SK + L +VME + ++ R L+ + N P L +
Sbjct: 79 CHHVVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 186 QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA---NISYICS 242
+I G+AY++ V HRD+ +N +V VK+ DFG + + + + +
Sbjct: 138 EIADGMAYLNAKKFV-HRDLAARNCMV-AHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 195
Query: 243 RYYRAPELIFGATEYTTSIDIWSAGCVLAEL--LLGQPLFPGENAVDQLVEIIKVLGTPT 300
+ APE + +TTS D+WS G VL E+ L QP N +Q+++ +
Sbjct: 196 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN--EQVLKFV------- 245
Query: 301 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA- 359
M+ Y D P P DL Q++P++R T LE
Sbjct: 246 ------MDGGYLD--------QP------DNCPERVTDLMRMCWQFNPNMRPTFLEIVNL 285
Query: 360 -----HPFFDEL 366
HP F E+
Sbjct: 286 LKDDLHPSFPEV 297
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 128/312 (41%), Gaps = 65/312 (20%)
Query: 83 RVVGTGSFGIVFQ--AKCLETGET---VAIKKVLQDRRYKNRELQLMRLMDHPNVISLKH 137
R +G GSFG+V++ A+ + GE VA+K V + + R + ++ +V+
Sbjct: 20 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER----IEFLNEASVMKGFT 75
Query: 138 C-----FFSTTSKDELFLNLVMEYVP----ETMYRVLKHYSSMNQRMP---LIYVKLYTY 185
C SK + L +VME + ++ R L+ + N P L +
Sbjct: 76 CHHVVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 134
Query: 186 QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA---NISYICS 242
+I G+AY++ V HRD+ +N +V VK+ DFG + + + + +
Sbjct: 135 EIADGMAYLNAKKFV-HRDLAARNCMV-AHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 192
Query: 243 RYYRAPELIFGATEYTTSIDIWSAGCVLAEL--LLGQPLFPGENAVDQLVEIIKVLGTPT 300
+ APE + +TTS D+WS G VL E+ L QP N +Q+++ +
Sbjct: 193 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN--EQVLKFV------- 242
Query: 301 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA- 359
M+ Y D P P DL Q++P +R T LE
Sbjct: 243 ------MDGGYLD--------QP------DNCPERVTDLMRMCWQFNPKMRPTFLEIVNL 282
Query: 360 -----HPFFDEL 366
HP F E+
Sbjct: 283 LKDDLHPSFPEV 294
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 128/312 (41%), Gaps = 65/312 (20%)
Query: 83 RVVGTGSFGIVFQ--AKCLETGET---VAIKKVLQDRRYKNRELQLMRLMDHPNVISLKH 137
R +G GSFG+V++ A+ + GE VA+K V + + R + ++ +V+
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER----IEFLNEASVMKGFT 78
Query: 138 C-----FFSTTSKDELFLNLVMEYVP----ETMYRVLKHYSSMNQRMP---LIYVKLYTY 185
C SK + L +VME + ++ R L+ + N P L +
Sbjct: 79 CHHVVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 186 QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEA---NISYICS 242
+I G+AY++ V HRD+ +N +V VK+ DFG + + + + +
Sbjct: 138 EIADGMAYLNAKKFV-HRDLAARNCMV-AHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 195
Query: 243 RYYRAPELIFGATEYTTSIDIWSAGCVLAEL--LLGQPLFPGENAVDQLVEIIKVLGTPT 300
+ APE + +TTS D+WS G VL E+ L QP N +Q+++ +
Sbjct: 196 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN--EQVLKFV------- 245
Query: 301 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA- 359
M+ Y D P P DL Q++P +R T LE
Sbjct: 246 ------MDGGYLD--------QP------DNCPERVTDLMRMCWQFNPKMRPTFLEIVNL 285
Query: 360 -----HPFFDEL 366
HP F E+
Sbjct: 286 LKDDLHPSFPEV 297
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 50/223 (22%)
Query: 85 VGTGSFGIVFQAKCL----ETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISL 135
+G G+FG VF A+C E + + K L++ R+ RE +L+ ++ H +++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR- 107
Query: 136 KHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRM---------PLIYVKLYTY 185
FF ++ L +V EY+ + R L+ + + + PL +L
Sbjct: 108 ---FFGVCTEGRPLL-MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 186 --QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR 243
Q+ G+ Y+ + V HRD+ +N LV VK+ DFG ++ + +
Sbjct: 164 ASQVAAGMVYLAGLHFV-HRDLATRNCLVGQ-GLVVKIGDFGMSRDIYS---------TD 212
Query: 244 YYRA------------PELIFGATEYTTSIDIWSAGCVLAELL 274
YYR PE I ++TT D+WS G VL E+
Sbjct: 213 YYRVGGRTMLPIRWMPPESIL-YRKFTTESDVWSFGVVLWEIF 254
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 97/214 (45%), Gaps = 38/214 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDR----RYKNRELQLMRLMDHPNVIS-LKHCF 139
VG G +G V++ L GE+VA+K + R ++ E+ L+ H N++ +
Sbjct: 16 VGKGRYGEVWRG--LWHGESVAVK-IFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDM 72
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHT--- 196
S S +L+L + + ++Y L+ + P + ++L GLA++H
Sbjct: 73 TSRNSSTQLWL-ITHYHEHGSLYDFLQRQT----LEPHLALRLAVSAAC-GLAHLHVEIF 126
Query: 197 ----VPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE-----ANISYICSRYYRA 247
P + HRD K +N+LV Q + D G A + +G N + ++ Y A
Sbjct: 127 GTQGKPAIAHRDFKSRNVLVKS-NLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMA 185
Query: 248 PELI--------FGATEYTTSIDIWSAGCVLAEL 273
PE++ F + ++T DIW+ G VL E+
Sbjct: 186 PEVLDEQIRTDCFESYKWT---DIWAFGLVLWEI 216
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 21/207 (10%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQ----DRRYKN-RELQLMRLMDHPNVISLKHCF 139
+G G+FG VF + VA+K + D + K +E ++++ HPN++ L
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRL---I 178
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTVPG 199
T K ++ +VME V + L + R+ + + G+ Y+ +
Sbjct: 179 GVCTQKQPIY--IVMELVQGGDF--LTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC 234
Query: 200 VCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---YRAPE-LIFGAT 255
+ HRD+ +N LV + +K+ DFG ++ G S + + APE L +G
Sbjct: 235 I-HRDLAARNCLVTE-KNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYG-- 290
Query: 256 EYTTSIDIWSAGCVLAELL-LGQPLFP 281
Y++ D+WS G +L E LG +P
Sbjct: 291 RYSSESDVWSFGILLWETFSLGASPYP 317
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 128/312 (41%), Gaps = 65/312 (20%)
Query: 83 RVVGTGSFGIVFQ--AKCLETGET---VAIKKVLQDRRYKNRELQLMRLMDHPNVISLKH 137
R +G GSFG+V++ A+ + GE VA+K V + + R + ++ +V+
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER----IEFLNEASVMKGFT 77
Query: 138 C-----FFSTTSKDELFLNLVMEYVP----ETMYRVLKHYSSMNQRMP---LIYVKLYTY 185
C SK + L +VME + ++ R L+ + N P L +
Sbjct: 78 CHHVVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 136
Query: 186 QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE---ANISYICS 242
+I G+AY++ V HRD+ +N +V VK+ DFG + + + + +
Sbjct: 137 EIADGMAYLNAKKFV-HRDLAARNCMV-AHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 194
Query: 243 RYYRAPELIFGATEYTTSIDIWSAGCVLAEL--LLGQPLFPGENAVDQLVEIIKVLGTPT 300
+ APE + +TTS D+WS G VL E+ L QP N +Q+++ +
Sbjct: 195 VRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN--EQVLKFV------- 244
Query: 301 REEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACA- 359
M+ Y D P P DL Q++P +R T LE
Sbjct: 245 ------MDGGYLD--------QP------DNCPERVTDLMRMCWQFNPKMRPTFLEIVNL 284
Query: 360 -----HPFFDEL 366
HP F E+
Sbjct: 285 LKDDLHPSFPEV 296
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 54/244 (22%)
Query: 85 VGTGSFGIVFQAKCL----ETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISL 135
+G G+FG VF A+C E + + K L++ R+ RE +L+ ++ H +++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR- 78
Query: 136 KHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRM---------PLIYVKLYTY 185
FF ++ L +V EY+ + R L+ + + + PL +L
Sbjct: 79 ---FFGVCTEGRPLL-MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 186 --QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR 243
Q+ G+ Y+ + V HRD+ +N LV VK+ DFG ++ + +
Sbjct: 135 ASQVAAGMVYLAGLHFV-HRDLATRNCLVGQ-GLVVKIGDFGMSRDIYS---------TD 183
Query: 244 YYRA------------PELIFGATEYTTSIDIWSAGCVLAELLL--GQPLFPGEN--AVD 287
YYR PE I ++TT D+WS G VL E+ QP + N A+D
Sbjct: 184 YYRVGGRTMLPIRWMPPESIL-YRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID 242
Query: 288 QLVE 291
+ +
Sbjct: 243 CITQ 246
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 18/157 (11%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL----QLMRLMDHP-NVI 133
Y R +G+GSFG ++ + +GE VAIK L+ + K+ +L + ++M +
Sbjct: 11 YRLGRKIGSGSFGDIYLGANIASGEEVAIK--LECVKTKHPQLHIESKFYKMMQGGVGIP 68
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
S+K C + + +VME + ++ + ++ +++ L V L Q+ + Y
Sbjct: 69 SIKWC-----GAEGDYNVMVMELLGPSLEDL---FNFCSRKFSLKTVLLLADQMISRIEY 120
Query: 194 IHTVPGVCHRDVKPQNLL--VDPLTHQVKLCDFGSAK 228
IH+ HRDVKP N L + + V + DFG AK
Sbjct: 121 IHS-KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 54/244 (22%)
Query: 85 VGTGSFGIVFQAKCL----ETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNVISL 135
+G G+FG VF A+C E + + K L++ R+ RE +L+ ++ H +++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR- 84
Query: 136 KHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRM---------PLIYVKLYTY 185
FF ++ L +V EY+ + R L+ + + + PL +L
Sbjct: 85 ---FFGVCTEGRPLL-MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 186 --QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSR 243
Q+ G+ Y+ + V HRD+ +N LV VK+ DFG ++ + +
Sbjct: 141 ASQVAAGMVYLAGLHFV-HRDLATRNCLVGQ-GLVVKIGDFGMSRDIYS---------TD 189
Query: 244 YYRA------------PELIFGATEYTTSIDIWSAGCVLAELLL--GQPLFPGEN--AVD 287
YYR PE I ++TT D+WS G VL E+ QP + N A+D
Sbjct: 190 YYRVGGRTMLPIRWMPPESIL-YRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID 248
Query: 288 QLVE 291
+ +
Sbjct: 249 CITQ 252
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 111/254 (43%), Gaps = 55/254 (21%)
Query: 82 ERVVGTGSFGIVFQAKCL----ETGETVAIKKVLQD-----RRYKNRELQLMRLMDHPNV 132
+R +G G+FG VF A+C E + + K L+D R+ +RE +L+ + H ++
Sbjct: 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHI 77
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVPE-TMYRVLKHY-------SSMNQRMPLIYVKLY- 183
+ F+ + + + +V EY+ + + L+ + + N L ++
Sbjct: 78 VK----FYGVCVEGDPLI-MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH 132
Query: 184 -TYQIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICS 242
QI G+ Y+ + V HRD+ +N LV VK+ DFG ++ +
Sbjct: 133 IAQQIAAGMVYLASQHFV-HRDLATRNCLVGE-NLLVKIGDFGMSR---------DVYST 181
Query: 243 RYYRA------------PELIFGATEYTTSIDIWSAGCVLAELLL--GQPLFPGENAVDQ 288
YYR PE I ++TT D+WS G VL E+ QP + N ++
Sbjct: 182 DYYRVGGHTMLPIRWMPPESIM-YRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--NE 238
Query: 289 LVEII---KVLGTP 299
++E I +VL P
Sbjct: 239 VIECITQGRVLQRP 252
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 129/321 (40%), Gaps = 83/321 (25%)
Query: 83 RVVGTGSFGIVFQ--AKCLETGET---VAIKKVLQDRRYKNRELQLMRLMDHPNVISLKH 137
R +G GSFG+V++ A+ + GE VA+K V + + R + ++ +V+
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER----IEFLNEASVMKGFT 78
Query: 138 C-----FFSTTSKDELFLNLVMEYVP----ETMYRVLKHYSSMNQRMP---LIYVKLYTY 185
C SK + L +VME + ++ R L+ + N P L +
Sbjct: 79 CHHVVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 186 QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYY 245
+I G+AY++ V HRD+ +N +V VK+ DFG + + + + YY
Sbjct: 138 EIADGMAYLNAKKFV-HRDLAARNCMV-AHDFTVKIGDFGMTRDIYE---------TAYY 186
Query: 246 R------------APELIFGATEYTTSIDIWSAGCVLAEL--LLGQPLFPGENAVDQLVE 291
R APE + +TTS D+WS G VL E+ L QP N +Q+++
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN--EQVLK 243
Query: 292 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 351
+ M+ Y D P P DL Q++P +R
Sbjct: 244 FV-------------MDGGYLD--------QP------DNCPERVTDLMRMCWQFNPKMR 276
Query: 352 CTALEACA------HPFFDEL 366
T LE HP F E+
Sbjct: 277 PTFLEIVNLLKDDLHPSFPEV 297
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 101/248 (40%), Gaps = 57/248 (22%)
Query: 63 STTIGGKNGEPKQTISYMAERV-----VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK 117
S T G +G P +A ++ VG G +G V++ GE VA+K + R K
Sbjct: 18 SCTSGSGSGLPFLVQRTVARQITLLECVGKGRYGEVWRGSW--QGENVAVK-IFSSRDEK 74
Query: 118 N--RELQLMR--LMDHPNVIS-LKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMN 172
+ RE +L ++ H N++ + S S +L+L + HY M
Sbjct: 75 SWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL--------------ITHYHEMG 120
Query: 173 QRMPLIYVKLYTYQ----------IFRGLAYIHT-------VPGVCHRDVKPQNLLVDPL 215
Y++L T I GLA++H P + HRD+K +N+LV
Sbjct: 121 SLYD--YLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKK- 177
Query: 216 THQVKLCDFGSAKVLVKGE-----ANISYICSRYYRAPELI-----FGATEYTTSIDIWS 265
Q + D G A + + N + ++ Y APE++ + +DIW+
Sbjct: 178 NGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWA 237
Query: 266 AGCVLAEL 273
G VL E+
Sbjct: 238 FGLVLWEV 245
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 129/321 (40%), Gaps = 83/321 (25%)
Query: 83 RVVGTGSFGIVFQ--AKCLETGET---VAIKKVLQDRRYKNRELQLMRLMDHPNVISLKH 137
R +G GSFG+V++ A+ + GE VA+K V + + R + ++ +V+
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER----IEFLNEASVMKGFT 78
Query: 138 C-----FFSTTSKDELFLNLVMEYVP----ETMYRVLKHYSSMNQRMP---LIYVKLYTY 185
C SK + L +VME + ++ R L+ + N P L +
Sbjct: 79 CHHVVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 186 QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYY 245
+I G+AY++ V HRD+ +N +V VK+ DFG + + + + YY
Sbjct: 138 EIADGMAYLNAKKFV-HRDLAARNCMV-AHDFTVKIGDFGMTRDIYE---------TDYY 186
Query: 246 R------------APELIFGATEYTTSIDIWSAGCVLAEL--LLGQPLFPGENAVDQLVE 291
R APE + +TTS D+WS G VL E+ L QP N +Q+++
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN--EQVLK 243
Query: 292 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 351
+ M+ Y D P P DL Q++P +R
Sbjct: 244 FV-------------MDGGYLD--------QP------DNCPERVTDLMRMCWQFNPKMR 276
Query: 352 CTALEACA------HPFFDEL 366
T LE HP F E+
Sbjct: 277 PTFLEIVNLLKDDLHPSFPEV 297
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 93/220 (42%), Gaps = 27/220 (12%)
Query: 83 RVVGTGSFGIVFQAKCLETGET---VAIKKVLQDRRYKNR------ELQLMRLMDHPNVI 133
+++G G FG V + + T VA+K + D + E M+ HPNVI
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 134 SLKHCFFSTTSK---DELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRG 190
L +S+ + + M+Y Y + + + +PL + + I G
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 191 LAYIHTVPGVCHRDVKPQN-LLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPE 249
+ Y+ HRD+ +N +L D +T V + DFG +K + G+ Y R + P
Sbjct: 160 MEYLSN-RNFLHRDLAARNCMLRDDMT--VCVADFGLSKKIYSGDY---YRQGRIAKMP- 212
Query: 250 LIFGATE------YTTSIDIWSAGCVLAELLL-GQPLFPG 282
+ + A E YT+ D+W+ G + E+ G +PG
Sbjct: 213 VKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPG 252
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 104/240 (43%), Gaps = 43/240 (17%)
Query: 64 TTIGGKNGEP---KQTI--SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--- 115
TT G +G P ++TI + + + +G G FG V++ K GE VA+K + R
Sbjct: 24 TTSGSGSGLPLLVQRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVK-IFSSREERS 80
Query: 116 -YKNRELQLMRLMDHPNVISLKHCFFSTTSKDE---LFLNLVMEYVPE-TMYRVLKHYSS 170
++ E+ ++ H N++ F + +KD L LV +Y +++ L Y+
Sbjct: 81 WFREAEIYQTVMLRHENILG----FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTV 136
Query: 171 MNQRMPLIYVKLYTYQIFRGLAYIHT-------VPGVCHRDVKPQNLLVDPLTHQVKLCD 223
+ M I + L T GLA++H P + HRD+K +N+LV + D
Sbjct: 137 TVEGM--IKLALSTAS---GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK-NGTCCIAD 190
Query: 224 FGSAKVLVKGEANISY-----ICSRYYRAPELIFGAT-----EYTTSIDIWSAGCVLAEL 273
G A I + ++ Y APE++ + E DI++ G V E+
Sbjct: 191 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 91/221 (41%), Gaps = 52/221 (23%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--RELQLMR--LMDHPNVIS-LKHCF 139
VG G +G V++ GE VA+K + R K+ RE +L ++ H N++ +
Sbjct: 16 VGKGRYGEVWRGSW--QGENVAVK-IFSSRDEKSWFRETELYNTVMLRHENILGFIASDM 72
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ----------IFR 189
S S +L+L + HY M Y++L T I
Sbjct: 73 TSRHSSTQLWL--------------ITHYHEMGSLYD--YLQLTTLDTVSCLRIVLSIAS 116
Query: 190 GLAYIHT-------VPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE-----ANI 237
GLA++H P + HRD+K +N+LV Q + D G A + + N
Sbjct: 117 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKK-NGQCCIADLGLAVMHSQSTNQLDVGNN 175
Query: 238 SYICSRYYRAPELI-----FGATEYTTSIDIWSAGCVLAEL 273
+ ++ Y APE++ + +DIW+ G VL E+
Sbjct: 176 PRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 91/221 (41%), Gaps = 52/221 (23%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKN--RELQLMR--LMDHPNVIS-LKHCF 139
VG G +G V++ GE VA+K + R K+ RE +L ++ H N++ +
Sbjct: 16 VGKGRYGEVWRGSW--QGENVAVK-IFSSRDEKSWFRETELYNTVMLRHENILGFIASDM 72
Query: 140 FSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQ----------IFR 189
S S +L+L + HY M Y++L T I
Sbjct: 73 TSRHSSTQLWL--------------ITHYHEMGSLYD--YLQLTTLDTVSCLRIVLSIAS 116
Query: 190 GLAYIHT-------VPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE-----ANI 237
GLA++H P + HRD+K +N+LV Q + D G A + + N
Sbjct: 117 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKK-NGQCCIADLGLAVMHSQSTNQLDVGNN 175
Query: 238 SYICSRYYRAPELI-----FGATEYTTSIDIWSAGCVLAEL 273
+ ++ Y APE++ + +DIW+ G VL E+
Sbjct: 176 PRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 104/240 (43%), Gaps = 43/240 (17%)
Query: 64 TTIGGKNGEP---KQTI--SYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRR--- 115
TT G +G P ++TI + + + +G G FG V++ K GE VA+K + R
Sbjct: 11 TTSGSGSGLPLLVQRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVK-IFSSREERS 67
Query: 116 -YKNRELQLMRLMDHPNVISLKHCFFSTTSKDE---LFLNLVMEYVPE-TMYRVLKHYSS 170
++ E+ ++ H N++ F + +KD L LV +Y +++ L Y+
Sbjct: 68 WFREAEIYQTVMLRHENILG----FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTV 123
Query: 171 MNQRMPLIYVKLYTYQIFRGLAYIHT-------VPGVCHRDVKPQNLLVDPLTHQVKLCD 223
+ M I + L T GLA++H P + HRD+K +N+LV + D
Sbjct: 124 TVEGM--IKLALSTAS---GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK-NGTCCIAD 177
Query: 224 FGSAKVLVKGEANISY-----ICSRYYRAPELIFGAT-----EYTTSIDIWSAGCVLAEL 273
G A I + ++ Y APE++ + E DI++ G V E+
Sbjct: 178 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 130/321 (40%), Gaps = 83/321 (25%)
Query: 83 RVVGTGSFGIVFQ--AKCLETGET---VAIKKVLQDRRYKNRELQLMRLMDHPNVISLKH 137
R +G GSFG+V++ A+ + GE VA+K V + + R + ++ +V+
Sbjct: 24 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER----IEFLNEASVMKGFT 79
Query: 138 C-----FFSTTSKDELFLNLVMEYVP----ETMYRVLKHYSSMNQRMP---LIYVKLYTY 185
C SK + L +VME + ++ R L+ + N P L +
Sbjct: 80 CHHVVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 138
Query: 186 QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYY 245
+I G+AY++ V HR++ +N +V VK+ DFG + + + + YY
Sbjct: 139 EIADGMAYLNAKKFV-HRNLAARNCMV-AHDFTVKIGDFGMTRDIYE---------TDYY 187
Query: 246 R------------APELIFGATEYTTSIDIWSAGCVLAEL--LLGQPLFPGENAVDQLVE 291
R APE + +TTS D+WS G VL E+ L QP N +Q+++
Sbjct: 188 RKGGKGLLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN--EQVLK 244
Query: 292 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 351
+ M+ Y D P P DL Q++P++R
Sbjct: 245 FV-------------MDGGYLD--------QP------DNCPERVTDLMRMCWQFNPNMR 277
Query: 352 CTALEACA------HPFFDEL 366
T LE HP F E+
Sbjct: 278 PTFLEIVNLLKDDLHPSFPEV 298
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 130/321 (40%), Gaps = 83/321 (25%)
Query: 83 RVVGTGSFGIVFQ--AKCLETGET---VAIKKVLQDRRYKNRELQLMRLMDHPNVISLKH 137
R +G GSFG+V++ A+ + GE VA+K V + + R + ++ +V+
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER----IEFLNEASVMKGFT 78
Query: 138 C-----FFSTTSKDELFLNLVMEYVP----ETMYRVLKHYSSMNQRMP---LIYVKLYTY 185
C SK + L +VME + ++ R L+ + N P L +
Sbjct: 79 CHHVVRLLGVVSKGQPTL-VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 186 QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRYY 245
+I G+AY++ V HR++ +N +V VK+ DFG + + + + YY
Sbjct: 138 EIADGMAYLNAKKFV-HRNLAARNCMV-AHDFTVKIGDFGMTRDIYE---------TDYY 186
Query: 246 R------------APELIFGATEYTTSIDIWSAGCVLAEL--LLGQPLFPGENAVDQLVE 291
R APE + +TTS D+WS G VL E+ L QP N +Q+++
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSN--EQVLK 243
Query: 292 IIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLR 351
+ M+ Y D P P DL Q++P++R
Sbjct: 244 FV-------------MDGGYLD--------QP------DNCPERVTDLMRMCWQFNPNMR 276
Query: 352 CTALEACA------HPFFDEL 366
T LE HP F E+
Sbjct: 277 PTFLEIVNLLKDDLHPSFPEV 297
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 18/157 (11%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL----QLMRLMDHPNVI- 133
Y R +G+GSFG ++ + GE VAIK L+ + K+ +L ++ ++M I
Sbjct: 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIK--LECVKTKHPQLHIESKIYKMMQGGVGIP 68
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
+++ C + + +VME + ++ + ++ +++ L V L Q+ + Y
Sbjct: 69 TIRWC-----GAEGDYNVMVMELLGPSLEDL---FNFCSRKFSLKTVLLLADQMISRIEY 120
Query: 194 IHTVPGVCHRDVKPQNLL--VDPLTHQVKLCDFGSAK 228
IH+ HRDVKP N L + + V + DFG AK
Sbjct: 121 IHS-KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 39/210 (18%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVL----QDRRYKNRELQLMRLMDHPNVISL-KHC 138
++G G FG V++ L G VA+K+ Q E++ + HP+++SL C
Sbjct: 46 LIGHGVFGKVYKG-VLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC 104
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKH-YSSMNQRMPLIYVKLYTYQI--FRGLAYIH 195
++E+ L + +Y+ + +H Y S M + + + I RGL Y+H
Sbjct: 105 ----DERNEMIL--IYKYMENGNLK--RHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH 156
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK-----------VLVKGEANISYICSRY 244
T + HRDVK N+L+D K+ DFG +K +VKG + YI Y
Sbjct: 157 T-RAIIHRDVKSINILLDE-NFVPKITDFGISKKGTELDQTHLXXVVKG--TLGYIDPEY 212
Query: 245 YRAPELIFGATEYTTSIDIWSAGCVLAELL 274
+ L T D++S G VL E+L
Sbjct: 213 FIKGRL-------TEKSDVYSFGVVLFEVL 235
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 111/262 (42%), Gaps = 31/262 (11%)
Query: 83 RVVGTGSFGIVFQAKCLETGET---VAIKKVLQDRRYKN------RELQLMRLMDHPNVI 133
R++G G FG V +A+ + + VA+K + D + RE M+ DHP+V
Sbjct: 29 RMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVA 88
Query: 134 SLKHCFFSTTSKDELFLNLV----MEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFR 189
L + +K L + +V M++ + + +PL + + I
Sbjct: 89 KLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIAC 148
Query: 190 GLAYIHTVPGVCHRDVKPQN-LLVDPLTHQVKLCDFGSAKVLVKGEANISYICSRY---Y 245
G+ Y+ + HRD+ +N +L + +T V + DFG ++ + G+ S+ +
Sbjct: 149 GMEYLSS-RNFIHRDLAARNCMLAEDMT--VCVADFGLSRKIYSGDYYRQGCASKLPVKW 205
Query: 246 RAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPG-ENAVDQLVEIIKVL--GTPTR 301
A E + YT D+W+ G + E++ GQ + G ENA EI L G +
Sbjct: 206 LALESL-ADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA-----EIYNYLIGGNRLK 259
Query: 302 EEIRCMNPNYTDFRFPQIKAHP 323
+ CM Y D + A P
Sbjct: 260 QPPECMEEVY-DLMYQCWSADP 280
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 94/210 (44%), Gaps = 39/210 (18%)
Query: 84 VVGTGSFGIVFQAKCLETGETVAIKKVL----QDRRYKNRELQLMRLMDHPNVISL-KHC 138
++G G FG V++ L G VA+K+ Q E++ + HP+++SL C
Sbjct: 46 LIGHGVFGKVYKG-VLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC 104
Query: 139 FFSTTSKDELFLNLVMEYVPETMYRVLKH-YSSMNQRMPLIYVKLYTYQI--FRGLAYIH 195
++E+ L + +Y+ + +H Y S M + + + I RGL Y+H
Sbjct: 105 ----DERNEMIL--IYKYMENGNLK--RHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH 156
Query: 196 TVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAK-----------VLVKGEANISYICSRY 244
T + HRDVK N+L+D K+ DFG +K +VKG + YI Y
Sbjct: 157 T-RAIIHRDVKSINILLDE-NFVPKITDFGISKKGTELGQTHLXXVVKG--TLGYIDPEY 212
Query: 245 YRAPELIFGATEYTTSIDIWSAGCVLAELL 274
+ L T D++S G VL E+L
Sbjct: 213 FIKGRL-------TEKSDVYSFGVVLFEVL 235
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 18/157 (11%)
Query: 79 YMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNREL----QLMRLMDHP-NVI 133
Y R +G+GSFG ++ + GE VAIK L+ + K+ +L ++ ++M +
Sbjct: 9 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIK--LECVKTKHPQLHIESKIYKMMQGGVGIP 66
Query: 134 SLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAY 193
+++ C + + +VME + ++ + ++ +++ L V L Q+ + Y
Sbjct: 67 TIRWC-----GAEGDYNVMVMELLGPSLEDL---FNFCSRKFSLKTVLLLADQMISRIEY 118
Query: 194 IHTVPGVCHRDVKPQNLL--VDPLTHQVKLCDFGSAK 228
IH+ HRDVKP N L + + V + DFG AK
Sbjct: 119 IHS-KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 154
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 38/214 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRR----YKNRELQLMRLMDHPNVISLKHCFF 140
+G G FG V++ K GE VA+K + R ++ E+ ++ H N++ F
Sbjct: 12 IGKGRFGEVWRGKW--RGEEVAVK-IFSSREERSWFREAEIYQTVMLRHENILG----FI 64
Query: 141 STTSKDE---LFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHT 196
+ +KD L LV +Y +++ L Y+ + M I + L T GLA++H
Sbjct: 65 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALSTAS---GLAHLHM 119
Query: 197 -------VPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISY-----ICSRY 244
P + HRD+K +N+LV + D G A I + ++
Sbjct: 120 EIVGTQGKPAIAHRDLKSKNILVKK-NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 178
Query: 245 YRAPELIFGAT-----EYTTSIDIWSAGCVLAEL 273
Y APE++ + E DI++ G V E+
Sbjct: 179 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 38/214 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRR----YKNRELQLMRLMDHPNVISLKHCFF 140
+G G FG V++ K GE VA+K + R ++ E+ ++ H N++ F
Sbjct: 17 IGKGRFGEVWRGKW--RGEEVAVK-IFSSREERSWFREAEIYQTVMLRHENILG----FI 69
Query: 141 STTSKDE---LFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHT 196
+ +KD L LV +Y +++ L Y+ + M I + L T GLA++H
Sbjct: 70 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALSTAS---GLAHLHM 124
Query: 197 -------VPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISY-----ICSRY 244
P + HRD+K +N+LV + D G A I + ++
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILVKK-NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 183
Query: 245 YRAPELIFGAT-----EYTTSIDIWSAGCVLAEL 273
Y APE++ + E DI++ G V E+
Sbjct: 184 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 38/214 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRR----YKNRELQLMRLMDHPNVISLKHCFF 140
+G G FG V++ K GE VA+K + R ++ E+ ++ H N++ F
Sbjct: 11 IGKGRFGEVWRGKW--RGEEVAVK-IFSSREERSWFREAEIYQTVMLRHENILG----FI 63
Query: 141 STTSKDE---LFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHT 196
+ +KD L LV +Y +++ L Y+ + M I + L T GLA++H
Sbjct: 64 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALSTAS---GLAHLHM 118
Query: 197 -------VPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISY-----ICSRY 244
P + HRD+K +N+LV + D G A I + ++
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKK-NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 177
Query: 245 YRAPELIFGAT-----EYTTSIDIWSAGCVLAEL 273
Y APE++ + E DI++ G V E+
Sbjct: 178 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 38/214 (17%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVLQDRR----YKNRELQLMRLMDHPNVISLKHCFF 140
+G G FG V++ K GE VA+K + R ++ E+ ++ H N++ F
Sbjct: 14 IGKGRFGEVWRGKW--RGEEVAVK-IFSSREERSWFREAEIYQTVMLRHENILG----FI 66
Query: 141 STTSKDE---LFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHT 196
+ +KD L LV +Y +++ L Y+ + M I + L T GLA++H
Sbjct: 67 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM--IKLALSTAS---GLAHLHM 121
Query: 197 -------VPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGEANISY-----ICSRY 244
P + HRD+K +N+LV + D G A I + ++
Sbjct: 122 EIVGTQGKPAIAHRDLKSKNILVKK-NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKR 180
Query: 245 YRAPELIFGAT-----EYTTSIDIWSAGCVLAEL 273
Y APE++ + E DI++ G V E+
Sbjct: 181 YMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 84/189 (44%), Gaps = 38/189 (20%)
Query: 67 GGKNGEPKQTISYMAERVVGTGSFGIVFQAKCLE--TGETVAIKKVLQ------DRRYKN 118
G + + T + +G+G FG VF KC++ G AIK+ + D +
Sbjct: 1 GAMGMKSRYTTEFHELEKIGSGEFGSVF--KCVKRLDGCIYAIKRSKKPLAGSVDEQNAL 58
Query: 119 RELQLMRLM-DHPNVISLKHCFFSTTSKDELFL--------NLVMEYVPETMYRVLKHYS 169
RE+ ++ H +V+ +FS ++D+ L + + + E YR++ ++
Sbjct: 59 REVYAHAVLGQHSHVVR----YFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFK 113
Query: 170 SMNQRMPLIYVKLYTYQIFRGLAYIHTVPGVCHRDVKPQNLLV------DPLTHQVKLCD 223
+ L+ Q+ RGL YIH++ + H D+KP N+ + + + + D
Sbjct: 114 EAELKDLLL-------QVGRGLRYIHSM-SLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165
Query: 224 FGSAKVLVK 232
+ S KV+ K
Sbjct: 166 WASNKVMFK 174
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 32/211 (15%)
Query: 85 VGTGSFGIVFQAKCLETGETVAIKKVL---QDRRYKNRELQLMRLMDHPNVIS-LKHCFF 140
+G G +G V+ K GE VA+K + ++ E+ LM H N++ +
Sbjct: 45 IGKGRYGEVWMGKW--RGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIK 102
Query: 141 STTSKDELFLNLVMEYVPE-TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHT--- 196
T S +L+L + +Y ++Y LK + + M +KL Y GL ++HT
Sbjct: 103 GTGSWTQLYL--ITDYHENGSLYDYLKSTTLDAKSM----LKL-AYSSVSGLCHLHTEIF 155
Query: 197 ----VPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVK--GEANI---SYICSRYYRA 247
P + HRD+K +N+LV + D G A + E +I + + ++ Y
Sbjct: 156 STQGKPAIAHRDLKSKNILVKK-NGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMP 214
Query: 248 PELI---FGATEYTTSI--DIWSAGCVLAEL 273
PE++ + + I D++S G +L E+
Sbjct: 215 PEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 38/171 (22%)
Query: 85 VGTGSFGIVFQAKCLE--TGETVAIKKVLQ------DRRYKNRELQLMRLM-DHPNVISL 135
+G+G FG VF KC++ G AIK+ + D + RE+ ++ H +V+
Sbjct: 17 IGSGEFGSVF--KCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR- 73
Query: 136 KHCFFSTTSKDELFL--------NLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQI 187
+FS ++D+ L + + + E YR++ ++ + L+ Q+
Sbjct: 74 ---YFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAELKDLLL-------QV 122
Query: 188 FRGLAYIHTVPGVCHRDVKPQNLLV------DPLTHQVKLCDFGSAKVLVK 232
RGL YIH++ + H D+KP N+ + + + + D+ S KV+ K
Sbjct: 123 GRGLRYIHSM-SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK 172
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 38/171 (22%)
Query: 85 VGTGSFGIVFQAKCLE--TGETVAIKKVLQ------DRRYKNRELQLMRLM-DHPNVISL 135
+G+G FG VF KC++ G AIK+ + D + RE+ ++ H +V+
Sbjct: 17 IGSGEFGSVF--KCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR- 73
Query: 136 KHCFFSTTSKDELFL--------NLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQI 187
+FS ++D+ L + + + E YR++ ++ + L+ Q+
Sbjct: 74 ---YFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAELKDLLL-------QV 122
Query: 188 FRGLAYIHTVPGVCHRDVKPQNLLV------DPLTHQVKLCDFGSAKVLVK 232
RGL YIH++ + H D+KP N+ + + + + D+ S KV+ K
Sbjct: 123 GRGLRYIHSM-SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK 172
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 38/171 (22%)
Query: 85 VGTGSFGIVFQAKCLE--TGETVAIKKVLQ------DRRYKNRELQLMRLM-DHPNVISL 135
+G+G FG VF KC++ G AIK+ + D + RE+ ++ H +V+
Sbjct: 15 IGSGEFGSVF--KCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVR- 71
Query: 136 KHCFFSTTSKDELFL--------NLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQI 187
+FS ++D+ L + + + E YR++ ++ + L+ Q+
Sbjct: 72 ---YFSAWAEDDHMLIQNEYCNGGSLADAISEN-YRIMSYFKEAELKDLLL-------QV 120
Query: 188 FRGLAYIHTVPGVCHRDVKPQNLLV------DPLTHQVKLCDFGSAKVLVK 232
RGL YIH++ + H D+KP N+ + + + + D+ S KV+ K
Sbjct: 121 GRGLRYIHSM-SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK 170
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 75/173 (43%), Gaps = 30/173 (17%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIKKV----------LQDRRYKNRELQLMRLM 127
++ + +G G+FG + K L T E VAIK L+ R YK QL
Sbjct: 5 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYK----QLSATE 60
Query: 128 DHPNVISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQI 187
P V +F K + +V+E + ++ + + ++ L V + Q+
Sbjct: 61 GVPQVY-----YFGPXGK---YNAMVLELLGPSLEDL---FDLCDRTFTLKTVLMIAIQL 109
Query: 188 FRGLAYIHTVPGVCHRDVKPQNLLVD-PLT---HQVKLCDFGSAKVLVKGEAN 236
+ Y+HT + +RDVKP+N LV P T H + + DFG AK + E
Sbjct: 110 ITRMEYVHT-KSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETK 161
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 67/168 (39%), Gaps = 29/168 (17%)
Query: 83 RVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFST 142
+ +G G+FG + K L T E VAIK K+R QL L++ F+
Sbjct: 6 KKIGCGNFGELRLGKNLYTNEYVAIKL----EPIKSRAPQL----------HLEYRFYKQ 51
Query: 143 TSKDELFLNLVMEYVPETMYRVL----------KHYSSMNQRMPLIYVKLYTYQIFRGLA 192
L V + P Y + + ++ L V + Q+ +
Sbjct: 52 LGSAGEGLPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRME 111
Query: 193 YIHTVPGVCHRDVKPQNLLV----DPLTHQVKLCDFGSAKVLVKGEAN 236
Y+H+ + +RDVKP+N L+ + H + + DFG AK + E
Sbjct: 112 YVHS-KNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETK 158
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 32/219 (14%)
Query: 83 RVVGTGSFGIVFQ--AKCLETGE---TVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKH 137
R +G GSFG+V++ AK + E VAIK V + + R + ++ +V+ +
Sbjct: 31 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER----IEFLNEASVMKEFN 86
Query: 138 C-----FFSTTSKDELFLNLVMEYVP----ETMYRVLKHYSSMNQRMP---LIYVKLYTY 185
C S+ + L ++ME + ++ R L+ + N + L +
Sbjct: 87 CHHVVRLLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAG 145
Query: 186 QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE----ANISYIC 241
+I G+AY++ V HRD+ +N +V VK+ DFG + + + + +
Sbjct: 146 EIADGMAYLNANKFV-HRDLAARNCMVAE-DFTVKIGDFGMTRDIYETDYYRKGGKGLLP 203
Query: 242 SRYYRAPELIFGATEYTTSIDIWSAGCVLAEL--LLGQP 278
R+ L G +TT D+WS G VL E+ L QP
Sbjct: 204 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQP 240
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 30/212 (14%)
Query: 83 RVVGTGSFGIVFQ--AKCLETGE---TVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKH 137
R +G GSFG+V++ AK + E VAIK V + + R + ++ +V+ +
Sbjct: 16 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER----IEFLNEASVMKEFN 71
Query: 138 C-----FFSTTSKDELFLNLVMEYVP----ETMYRVLKHYSSMNQRMP---LIYVKLYTY 185
C S+ + L ++ME + ++ R L+ N + L +
Sbjct: 72 CHHVVRLLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 130
Query: 186 QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE----ANISYIC 241
+I G+AY++ V HRD+ +N +V VK+ DFG + + + + +
Sbjct: 131 EIADGMAYLNANKFV-HRDLAARNCMVAE-DFTVKIGDFGMTRDIXETDXXRKGGKGLLP 188
Query: 242 SRYYRAPELIFGATEYTTSIDIWSAGCVLAEL 273
R+ L G +TT D+WS G VL E+
Sbjct: 189 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEI 218
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 32/219 (14%)
Query: 83 RVVGTGSFGIVFQ--AKCLETGE---TVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKH 137
R +G GSFG+V++ AK + E VAIK V + + R + ++ +V+ +
Sbjct: 25 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER----IEFLNEASVMKEFN 80
Query: 138 C-----FFSTTSKDELFLNLVMEYVP----ETMYRVLKHYSSMNQRMP---LIYVKLYTY 185
C S+ + L ++ME + ++ R L+ N + L +
Sbjct: 81 CHHVVRLLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 139
Query: 186 QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE----ANISYIC 241
+I G+AY++ V HRD+ +N +V VK+ DFG + + + + +
Sbjct: 140 EIADGMAYLNANKFV-HRDLAARNCMVAE-DFTVKIGDFGMTRDIXETDXXRKGGKGLLP 197
Query: 242 SRYYRAPELIFGATEYTTSIDIWSAGCVLAEL--LLGQP 278
R+ L G +TT D+WS G VL E+ L QP
Sbjct: 198 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQP 234
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 35.0 bits (79), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 32/219 (14%)
Query: 83 RVVGTGSFGIVFQ--AKCLETGE---TVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKH 137
R +G GSFG+V++ AK + E VAIK V + + R + ++ +V+ +
Sbjct: 21 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER----IEFLNEASVMKEFN 76
Query: 138 C-----FFSTTSKDELFLNLVMEYVP----ETMYRVLKHYSSMNQRMP---LIYVKLYTY 185
C S+ + L ++ME + ++ R L+ + N + L +
Sbjct: 77 CHHVVRLLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAG 135
Query: 186 QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE----ANISYIC 241
+I G+AY++ V HRD+ +N +V VK+ DFG + + + + +
Sbjct: 136 EIADGMAYLNANKFV-HRDLAARNCMVAE-DFTVKIGDFGMTRDIYETDYYRKGGKGLLP 193
Query: 242 SRYYRAPELIFGATEYTTSIDIWSAGCVLAEL--LLGQP 278
R+ L G +TT D+WS G VL E+ L QP
Sbjct: 194 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQP 230
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 32/219 (14%)
Query: 83 RVVGTGSFGIVFQ--AKCLETGE---TVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKH 137
R +G GSFG+V++ AK + E VAIK V + + R + ++ +V+ +
Sbjct: 31 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER----IEFLNEASVMKEFN 86
Query: 138 C-----FFSTTSKDELFLNLVMEYVP----ETMYRVLKHYSSMNQRMP---LIYVKLYTY 185
C S+ + L ++ME + ++ R L+ N + L +
Sbjct: 87 CHHVVRLLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 145
Query: 186 QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE----ANISYIC 241
+I G+AY++ V HRD+ +N +V VK+ DFG + + + + +
Sbjct: 146 EIADGMAYLNANKFV-HRDLAARNCMVAE-DFTVKIGDFGMTRDIYETDYYRKGGKGLLP 203
Query: 242 SRYYRAPELIFGATEYTTSIDIWSAGCVLAEL--LLGQP 278
R+ L G +TT D+WS G VL E+ L QP
Sbjct: 204 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQP 240
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 34.7 bits (78), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 32/219 (14%)
Query: 83 RVVGTGSFGIVFQ--AKCLETGE---TVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKH 137
R +G GSFG+V++ AK + E VAIK V + + R + ++ +V+ +
Sbjct: 22 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER----IEFLNEASVMKEFN 77
Query: 138 C-----FFSTTSKDELFLNLVMEYVP----ETMYRVLKHYSSMNQRMP---LIYVKLYTY 185
C S+ + L ++ME + ++ R L+ N + L +
Sbjct: 78 CHHVVRLLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 136
Query: 186 QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE----ANISYIC 241
+I G+AY++ V HRD+ +N +V VK+ DFG + + + + +
Sbjct: 137 EIADGMAYLNANKFV-HRDLAARNCMVAE-DFTVKIGDFGMTRDIYETDYYRKGGKGLLP 194
Query: 242 SRYYRAPELIFGATEYTTSIDIWSAGCVLAEL--LLGQP 278
R+ L G +TT D+WS G VL E+ L QP
Sbjct: 195 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQP 231
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 34.7 bits (78), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 30/212 (14%)
Query: 83 RVVGTGSFGIVFQ--AKCLETGE---TVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKH 137
R +G GSFG+V++ AK + E VAIK V + + R + ++ +V+ +
Sbjct: 18 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER----IEFLNEASVMKEFN 73
Query: 138 C-----FFSTTSKDELFLNLVMEYVP----ETMYRVLKHYSSMNQRMP---LIYVKLYTY 185
C S+ + L ++ME + ++ R L+ N + L +
Sbjct: 74 CHHVVRLLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 132
Query: 186 QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE----ANISYIC 241
+I G+AY++ V HRD+ +N +V VK+ DFG + + + + +
Sbjct: 133 EIADGMAYLNANKFV-HRDLAARNCMVAE-DFTVKIGDFGMTRDIYETDYYRKGGKGLLP 190
Query: 242 SRYYRAPELIFGATEYTTSIDIWSAGCVLAEL 273
R+ L G +TT D+WS G VL E+
Sbjct: 191 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEI 220
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 32/219 (14%)
Query: 83 RVVGTGSFGIVFQ--AKCLETGE---TVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKH 137
R +G GSFG+V++ AK + E VAIK V + + R + ++ +V+ +
Sbjct: 24 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER----IEFLNEASVMKEFN 79
Query: 138 C-----FFSTTSKDELFLNLVMEYVP----ETMYRVLKHYSSMNQRMP---LIYVKLYTY 185
C S+ + L ++ME + ++ R L+ N + L +
Sbjct: 80 CHHVVRLLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 138
Query: 186 QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE----ANISYIC 241
+I G+AY++ V HRD+ +N +V VK+ DFG + + + + +
Sbjct: 139 EIADGMAYLNANKFV-HRDLAARNCMVAE-DFTVKIGDFGMTRDIYETDYYRKGGKGLLP 196
Query: 242 SRYYRAPELIFGATEYTTSIDIWSAGCVLAEL--LLGQP 278
R+ L G +TT D+WS G VL E+ L QP
Sbjct: 197 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQP 233
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 32/219 (14%)
Query: 83 RVVGTGSFGIVFQ--AKCLETGE---TVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKH 137
R +G GSFG+V++ AK + E VAIK V + + R + ++ +V+ +
Sbjct: 25 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER----IEFLNEASVMKEFN 80
Query: 138 C-----FFSTTSKDELFLNLVMEYVP----ETMYRVLKHYSSMNQRMP---LIYVKLYTY 185
C S+ + L ++ME + ++ R L+ N + L +
Sbjct: 81 CHHVVRLLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 139
Query: 186 QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE----ANISYIC 241
+I G+AY++ V HRD+ +N +V VK+ DFG + + + + +
Sbjct: 140 EIADGMAYLNANKFV-HRDLAARNCMVAE-DFTVKIGDFGMTRDIYETDYYRKGGKGLLP 197
Query: 242 SRYYRAPELIFGATEYTTSIDIWSAGCVLAEL--LLGQP 278
R+ L G +TT D+WS G VL E+ L QP
Sbjct: 198 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQP 234
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 32/219 (14%)
Query: 83 RVVGTGSFGIVFQ--AKCLETGE---TVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKH 137
R +G GSFG+V++ AK + E VAIK V + + R + ++ +V+ +
Sbjct: 24 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER----IEFLNEASVMKEFN 79
Query: 138 C-----FFSTTSKDELFLNLVMEYVP----ETMYRVLKHYSSMNQRMP---LIYVKLYTY 185
C S+ + L ++ME + ++ R L+ N + L +
Sbjct: 80 CHHVVRLLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 138
Query: 186 QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE----ANISYIC 241
+I G+AY++ V HRD+ +N +V VK+ DFG + + + + +
Sbjct: 139 EIADGMAYLNANKFV-HRDLAARNCMVAE-DFTVKIGDFGMTRDIYETDYYRKGGKGLLP 196
Query: 242 SRYYRAPELIFGATEYTTSIDIWSAGCVLAEL--LLGQP 278
R+ L G +TT D+WS G VL E+ L QP
Sbjct: 197 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQP 233
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 10/99 (10%)
Query: 186 QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE----ANISYIC 241
+I G+AY++ V HRD+ +N +V VK+ DFG + + + + +
Sbjct: 168 EIADGMAYLNANKFV-HRDLAARNCMVAE-DFTVKIGDFGMTRDIYETDYYRKGGKGLLP 225
Query: 242 SRYYRAPELIFGATEYTTSIDIWSAGCVLAEL--LLGQP 278
R+ L G +TT D+WS G VL E+ L QP
Sbjct: 226 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQP 262
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 103/251 (41%), Gaps = 33/251 (13%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIK-KVLQDRRYK-NRELQLMRLMDHPNVISL 135
++ + +G G+FG + K L T E VAIK + ++ R + + E + + + + I
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQ 69
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
+ F + + L L+ + + + ++ L V + Q+ + Y+H
Sbjct: 70 VYYFGPCGKYNAMVLELLGPSLEDL-------FDLCDRTFSLKTVLMIAIQLISRMEYVH 122
Query: 196 TVPGVCHRDVKPQNLLV----DPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELI 251
+ + +RDVKP+N L+ + + + DFG AK + E +I YR + +
Sbjct: 123 S-KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETK-KHIP---YREHKSL 177
Query: 252 FGATEYTT-----------SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 300
G Y + D+ + G + L G + G A D L E + +G
Sbjct: 178 TGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKA-DTLKERYQKIGDTK 236
Query: 301 RE---EIRCMN 308
R E+ C N
Sbjct: 237 RATPIEVLCEN 247
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 18/160 (11%)
Query: 77 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK----NRELQLMRLMDHPNV 132
+ Y R +G GSFG++F+ L + VAIK + RR E + +L+
Sbjct: 9 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIK--FEPRRSDAPQLRDEYRTYKLLAGCTG 66
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
I + F + L ++L+ + + + + +S V + Q+ +
Sbjct: 67 IPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKT-------VAMAAKQMLARVQ 119
Query: 193 YIHTVPGVCHRDVKPQNLLV----DPLTHQVKLCDFGSAK 228
IH + +RD+KP N L+ + + + DFG K
Sbjct: 120 SIHE-KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 158
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 18/160 (11%)
Query: 77 ISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDRRYK----NRELQLMRLMDHPNV 132
+ Y R +G GSFG++F+ L + VAIK + RR E + +L+
Sbjct: 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIK--FEPRRSDAPQLRDEYRTYKLLAGCTG 67
Query: 133 ISLKHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLA 192
I + F + L ++L+ + + + + +S V + Q+ +
Sbjct: 68 IPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKT-------VAMAAKQMLARVQ 120
Query: 193 YIHTVPGVCHRDVKPQNLLV----DPLTHQVKLCDFGSAK 228
IH + +RD+KP N L+ + + + DFG K
Sbjct: 121 SIHE-KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 95/219 (43%), Gaps = 32/219 (14%)
Query: 83 RVVGTGSFGIVFQ--AKCLETGE---TVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKH 137
R +G GSFG+V++ AK + E VAIK V + + R + ++ +V+ +
Sbjct: 18 RELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER----IEFLNEASVMKEFN 73
Query: 138 C-----FFSTTSKDELFLNLVMEYVP----ETMYRVLKHYSSMNQRMP---LIYVKLYTY 185
C S+ + L ++ME + ++ R L+ N + L +
Sbjct: 74 CHHVVRLLGVVSQGQPTL-VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAG 132
Query: 186 QIFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVKGE----ANISYIC 241
+I G+AY++ V HRD+ +N V VK+ DFG + + + + +
Sbjct: 133 EIADGMAYLNANKFV-HRDLAARNCXVAE-DFTVKIGDFGMTRDIYETDYYRKGGKGLLP 190
Query: 242 SRYYRAPELIFGATEYTTSIDIWSAGCVLAEL--LLGQP 278
R+ L G +TT D+WS G VL E+ L QP
Sbjct: 191 VRWMSPESLKDGV--FTTYSDVWSFGVVLWEIATLAEQP 227
>pdb|4AX8|A Chain A, Medium Resolution Structure Of The Bifunctional Kinase-
Methyltransferase Wbdd
Length = 569
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 187 IFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGS 226
+ R LA + G H DV+P N++VD H +L DFGS
Sbjct: 348 LLRSLAALEK-QGFWHDDVRPWNVMVDARQH-ARLIDFGS 385
>pdb|4AZS|A Chain A, High Resolution (2.2 A) Crystal Structure Of Wbdd.
pdb|4AZT|A Chain A, Co-Crystal Structure Of Wbdd And Kinase Inhibitor
Ly294002.
pdb|4AZV|A Chain A, Co-crystal Structure Of Wbdd And Kinase Inhibitor
Gw435821x
Length = 569
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 187 IFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGS 226
+ R LA + G H DV+P N++VD H +L DFGS
Sbjct: 348 LLRSLAALEK-QGFWHDDVRPWNVMVDARQH-ARLIDFGS 385
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
Query: 107 IKKVLQDRRYK-------NRELQLMRLMDHPNVISLKHCFFSTTSKDELFLNLVMEYVPE 159
+ KVL+ R + N E +R+ HPNV+ + S + + M Y
Sbjct: 37 VVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPY--G 94
Query: 160 TMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIHTV-PGVCHRDVKPQNLLVDP-LTH 217
++Y VL + N + + + RG+A++HT+ P + + +++++D +T
Sbjct: 95 SLYNVL--HEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTA 152
Query: 218 QVKLCDFGSAKVLVKGEANISYICSRYYRAPELIFGATEYTT--SIDIWSAGCVLAELL 274
++ + D K + + + + APE + E T S D+WS +L EL+
Sbjct: 153 RISMAD---VKFSFQSPGR---MYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELV 205
>pdb|4AZW|A Chain A, Crystal Structure Of Monomeric Wbdd
Length = 471
Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 187 IFRGLAYIHTVPGVCHRDVKPQNLLVDPLTHQVKLCDFGS 226
+ R LA + G H DV+P N++VD H +L DFGS
Sbjct: 348 LLRSLAALEK-KGFWHDDVRPWNVMVDARQH-ARLIDFGS 385
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 31.6 bits (70), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 102/251 (40%), Gaps = 33/251 (13%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIK-KVLQDRRYK-NRELQLMRLMDHPNVISL 135
++ + +G G+FG + K L T E VAIK + ++ R + + E + + + + I
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQ 69
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
+ F + + L L+ + + + ++ L V + Q+ + Y+H
Sbjct: 70 VYYFGPCGKYNAMVLELLGPSLEDL-------FDLCDRTFSLKTVLMIAIQLISRMEYVH 122
Query: 196 TVPGVCHRDVKPQNLLV----DPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELI 251
+ + +RDVKP+N L+ + + + DF AK + E +I YR + +
Sbjct: 123 S-KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETK-KHIP---YREHKSL 177
Query: 252 FGATEYTT-----------SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 300
G Y + D+ + G + L G + G A D L E + +G
Sbjct: 178 TGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKA-DTLKERYQKIGDTK 236
Query: 301 RE---EIRCMN 308
R E+ C N
Sbjct: 237 RATPIEVLCEN 247
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 102/251 (40%), Gaps = 33/251 (13%)
Query: 78 SYMAERVVGTGSFGIVFQAKCLETGETVAIK-KVLQDRRYK-NRELQLMRLMDHPNVISL 135
++ + +G G+FG + K L T E VAIK + ++ R + + E + + + + I
Sbjct: 31 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQ 90
Query: 136 KHCFFSTTSKDELFLNLVMEYVPETMYRVLKHYSSMNQRMPLIYVKLYTYQIFRGLAYIH 195
+ F + + L L+ + + + ++ L V + Q+ + Y+H
Sbjct: 91 VYYFGPCGKYNAMVLELLGPSLEDL-------FDLCDRTFSLKTVLMIAIQLISRMEYVH 143
Query: 196 TVPGVCHRDVKPQNLLV----DPLTHQVKLCDFGSAKVLVKGEANISYICSRYYRAPELI 251
+ + +RDVKP+N L+ + + + DF AK + E +I YR + +
Sbjct: 144 S-KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETK-KHIP---YREHKSL 198
Query: 252 FGATEYTT-----------SIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPT 300
G Y + D+ + G + L G + G A D L E + +G
Sbjct: 199 TGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKA-DTLKERYQKIGDTK 257
Query: 301 RE---EIRCMN 308
R E+ C N
Sbjct: 258 RATPIEVLCEN 268
>pdb|1QNL|A Chain A, Amide ReceptorNEGATIVE REGULATOR OF THE AMIDASE OPERON OF
Pseudomonas Aeruginosa (Amic) Complexed With Butyramide
Length = 385
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 17/114 (14%)
Query: 266 AGCVLAELLLGQPLFPGENAVDQLVEII----------KVLGTPTREEIRCMNPNYTDFR 315
G VL E+ + PL+P ++ + + VE I V+GT T E R + Y D R
Sbjct: 168 GGTVLEEIYI--PLYPSDDDLQRAVERIYQARADVVFSTVVGTGTAELYRAIARRYGDGR 225
Query: 316 FPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA----LEACAHPFFDE 365
P I + + +M + + + Y S+ A ++AC H FF E
Sbjct: 226 RPPIASLTTSEAEVAKMESDVAEGQVVVAPYFSSIDTPASRAFVQAC-HGFFPE 278
>pdb|1QO0|A Chain A, Amide Receptor Of The Amidase Operon Of Pseudomonas
Aeruginosa (Amic) Complexed With The Positive Regulator
Amir.
pdb|1QO0|B Chain B, Amide Receptor Of The Amidase Operon Of Pseudomonas
Aeruginosa (Amic) Complexed With The Positive Regulator
Amir.
pdb|1PEA|A Chain A, Amide ReceptorNEGATIVE REGULATOR OF THE AMIDASE OPERON OF
Pseudomonas Aeruginosa (Amic) Complexed With Acetamide
Length = 385
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 17/114 (14%)
Query: 266 AGCVLAELLLGQPLFPGENAVDQLVEII----------KVLGTPTREEIRCMNPNYTDFR 315
G VL E+ + PL+P ++ + + VE I V+GT T E R + Y D R
Sbjct: 168 GGTVLEEIYI--PLYPSDDDLQRAVERIYQARADVVFSTVVGTGTAELYRAIARRYGDGR 225
Query: 316 FPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTA----LEACAHPFFDE 365
P I + + +M + + + Y S+ A ++AC H FF E
Sbjct: 226 RPPIASLTTSEAEVAKMESDVAEGQVVVAPYFSSIDTPASRAFVQAC-HGFFPE 278
>pdb|3H5D|A Chain A, Dihydrodipicolinate Synthase From Drug-Resistant
Streptococc Pneumoniae
pdb|3H5D|B Chain B, Dihydrodipicolinate Synthase From Drug-Resistant
Streptococc Pneumoniae
pdb|3H5D|C Chain C, Dihydrodipicolinate Synthase From Drug-Resistant
Streptococc Pneumoniae
pdb|3H5D|D Chain D, Dihydrodipicolinate Synthase From Drug-Resistant
Streptococc Pneumoniae
Length = 311
Score = 29.3 bits (64), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 9/16 (56%), Positives = 13/16 (81%)
Query: 123 LMRLMDHPNVISLKHC 138
++RL DHPN+I +K C
Sbjct: 155 MLRLADHPNIIGVKEC 170
>pdb|3KRA|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium
pdb|3KRA|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium
pdb|3KRC|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp
pdb|3KRC|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Ipp
pdb|3KRF|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (I)
pdb|3KRF|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (I)
pdb|3KRO|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (Ii)
pdb|3KRO|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium, Ipp, And Dmaspp (Ii)
pdb|3KRP|A Chain A, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
pdb|3KRP|D Chain D, Mint Heterotetrameric Geranyl Pyrophosphate Synthase In
Complex With Magnesium And Gpp
pdb|3OAB|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
pdb|3OAB|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
pdb|3OAC|A Chain A, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
pdb|3OAC|D Chain D, Mint Deletion Mutant Of Heterotetrameric Geranyl
Pyrophosphate Synthase In Complex With Ligands
Length = 295
Score = 28.9 bits (63), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 28 FDNDLLKRHRPDMDSDKEMSAAVIQGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGT 87
DND L+R +P S AV+ G+ ++ K P++ + + E V
Sbjct: 88 MDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAPPERIVRVLGELAVSI 147
Query: 88 GSFGIV 93
GS G+V
Sbjct: 148 GSEGLV 153
>pdb|1JVJ|A Chain A, Crystal Structure Of N132a Mutant Of Tem-1 Beta-Lactamase
In Complex With A N-Formimidoyl-Thienamycine
Length = 263
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 10/57 (17%)
Query: 30 NDLLK------RHRPDMDSDKEMSAAVIQGNDAVTGHIISTTIGGKNGEPKQTISYM 80
NDL++ +H D + +E+ +A I +DA +++ TTIGG PK+ +++
Sbjct: 75 NDLVEYSPVTEKHLTDGMTVRELCSAAITMSDATAANLLLTTIGG----PKELTAFL 127
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,348,994
Number of Sequences: 62578
Number of extensions: 531335
Number of successful extensions: 4561
Number of sequences better than 100.0: 966
Number of HSP's better than 100.0 without gapping: 548
Number of HSP's successfully gapped in prelim test: 418
Number of HSP's that attempted gapping in prelim test: 1757
Number of HSP's gapped (non-prelim): 1062
length of query: 419
length of database: 14,973,337
effective HSP length: 101
effective length of query: 318
effective length of database: 8,652,959
effective search space: 2751640962
effective search space used: 2751640962
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)