Your job contains 1 sequence.
>014751
MAPPDLRRPFKRTAISDQQRRRELSLQRQSQNRRDAQQQARCLASSVLSLQSQYPDPVPE
LEIEPESQPQQEAGPLTKDLDIRQASKLRGPEVRKWFASQLMLPEWMIDVPDRLSHDWYV
FARPAGKRCIVVSSNGTTVSRERNGSILHHFPSALPSGARTKDPSGSAQSYCILDCIFHE
LDQTYYVIDMVCWRGYSLYDCTAEFRFFWLNSKLAETGACDAPSHYYKFRFSTVPVYNCD
QRGLYSAYIESVPYAKDGLLFYNKHAHYQTGNTPLALVWKDEKCSQYVIDTDSKGQVLSQ
QQVVLELQEDGKLSTSDDPPVIFGCLDGEFIQKSGLQSGSLLKFAIGNGGLSFVDGKLEK
SDLNYLGKSNRARMFADSYSKVIFQYMVRHTPLKFDDLLASVSPSDDEENKPCDVEMVD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014751
(419 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2117348 - symbol:AT4G24880 species:3702 "Arabi... 1456 3.8e-149 1
ZFIN|ZDB-GENE-030131-3464 - symbol:snupn "snurportin 1" s... 454 5.7e-43 1
UNIPROTKB|Q5ZI43 - symbol:SNUPN "Snurportin-1" species:90... 442 1.1e-41 1
UNIPROTKB|Q2TBK8 - symbol:SNUPN "Snurportin-1" species:99... 434 7.5e-41 1
UNIPROTKB|E2RL29 - symbol:SNUPN "Uncharacterized protein"... 434 7.5e-41 1
UNIPROTKB|F1SJ72 - symbol:SNUPN "Uncharacterized protein"... 434 7.5e-41 1
RGD|1303191 - symbol:Snupn "snurportin 1" species:10116 "... 433 9.6e-41 1
MGI|MGI:1913319 - symbol:Snupn "snurportin 1" species:100... 431 1.6e-40 1
UNIPROTKB|C9K0X5 - symbol:SNUPN "Snurportin-1" species:96... 430 2.0e-40 1
UNIPROTKB|O95149 - symbol:SNUPN "Snurportin-1" species:96... 430 2.0e-40 1
UNIPROTKB|H3BRI5 - symbol:SNUPN "Snurportin-1" species:96... 334 3.0e-30 1
WB|WBGene00017746 - symbol:F23F1.5 species:6239 "Caenorha... 316 2.4e-28 1
UNIPROTKB|E1BWZ6 - symbol:SNUPN "Snurportin-1" species:90... 306 2.8e-27 1
UNIPROTKB|F1NVH6 - symbol:SNUPN "Snurportin-1" species:90... 302 7.3e-27 1
UNIPROTKB|H3BSK1 - symbol:SNUPN "Snurportin-1" species:96... 122 5.8e-07 1
>TAIR|locus:2117348 [details] [associations]
symbol:AT4G24880 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] EMBL:CP002687 KO:K13151
EMBL:AY057614 EMBL:BT029012 IPI:IPI00540371 RefSeq:NP_567711.1
UniGene:At.26269 ProteinModelPortal:Q93ZD6 IntAct:Q93ZD6
STRING:Q93ZD6 PRIDE:Q93ZD6 EnsemblPlants:AT4G24880.1 GeneID:828590
KEGG:ath:AT4G24880 TAIR:At4g24880 HOGENOM:HOG000265187
InParanoid:Q93ZD6 OMA:ETGACDP PhylomeDB:Q93ZD6
ProtClustDB:CLSN2689598 Genevestigator:Q93ZD6 Uniprot:Q93ZD6
Length = 417
Score = 1456 (517.6 bits), Expect = 3.8e-149, P = 3.8e-149
Identities = 276/421 (65%), Positives = 319/421 (75%)
Query: 1 MAPPDLRRPFKRTAISDXXXXXXXXXXXXXXXXXDAQQQARCLASSVLSLQSQYPDPVPE 60
MAP ++RRPFKR ISD DAQQ+AR LASS++SLQS PD PE
Sbjct: 1 MAPHEIRRPFKRRPISDQQKRRELSLIRQTQHRSDAQQRARNLASSLISLQSSSPDVDPE 60
Query: 61 L--EIEPESQPQQEAGPLTKDLDIRQASKLRGPEVRKWFASQLMLPEWMIDVPDRLSHDW 118
+ E PE + + D+RQAS+LRGPE RKWFA QLMLPEWMIDVPD LS DW
Sbjct: 61 ILSEAVPELVGTESE---SSSFDVRQASRLRGPEARKWFAKQLMLPEWMIDVPDNLSQDW 117
Query: 119 YVFARPAGKRCIVVSSNGTTVSRERNGSILHHFPSALPSGARTKDPSGSAQSYCILDCIF 178
YV ARPAGKRC VVSS+GTTVSR RNGS LH FPSALP GAR K SG A SY ILDCIF
Sbjct: 118 YVLARPAGKRCFVVSSDGTTVSRVRNGSTLHLFPSALPGGARKKGASGPANSYSILDCIF 177
Query: 179 HELDQTYYVIDMVCWRGYSLYDCTAEFRFFWLNSKLAETGACDAPSHYYKFRFSTVPVYN 238
HE DQTYYVIDMVCWRGYSLY+CT+EFRFFWL SKLAETGACD PS Y+KFRFS VP YN
Sbjct: 178 HESDQTYYVIDMVCWRGYSLYECTSEFRFFWLQSKLAETGACDPPSVYHKFRFSVVPFYN 237
Query: 239 CDQRGLYSAYIESVPYAKDGLLFYNKHAHYQTGNTPLALVWKDEKCSQYVIDTDSKGXXX 298
CDQ GL+SAY S+PY +DGLLFYNKHAHY TGNTPL L+WKDE CSQYVIDTD+ G
Sbjct: 238 CDQSGLHSAYTGSLPYVRDGLLFYNKHAHYHTGNTPLVLIWKDESCSQYVIDTDNNGEVP 297
Query: 299 XXXXXXXXXXXDGKLSTSDDPPVIFGCLDGEFIQKSGLQSGSLLKFAIGNGGLSFVDGKL 358
+GKL TSDDPPV F CL+ +F+++SGL SGSL++FAIG+GGL VDG+
Sbjct: 298 NQQHIVLELQEEGKLVTSDDPPVPFSCLNADFVKQSGLSSGSLIRFAIGDGGLKCVDGRF 357
Query: 359 EKSDLNYLGKSNRARMFADSYSKVIFQYMVRHTPLKFDDLLASVSPSDDEENKPCDVEMV 418
EK+DL Y+G SNRAR FADSYSK++FQYM RH+PLK +DL +++SP +D+++KP +VEM
Sbjct: 358 EKADLQYIGVSNRARAFADSYSKIMFQYMARHSPLKVEDLASTISP-EDQQDKPPEVEMS 416
Query: 419 D 419
D
Sbjct: 417 D 417
>ZFIN|ZDB-GENE-030131-3464 [details] [associations]
symbol:snupn "snurportin 1" species:7955 "Danio
rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006370
"7-methylguanosine mRNA capping" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0004484 "mRNA
guanylyltransferase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0061015 "snRNA import into nucleus" evidence=IEA] [GO:0006606
"protein import into nucleus" evidence=IEA] InterPro:IPR001339
InterPro:IPR002652 InterPro:IPR017336 InterPro:IPR024721
Pfam:PF01331 Pfam:PF11538 PIRSF:PIRSF037955 PROSITE:PS51214
ZFIN:ZDB-GENE-030131-3464 GO:GO:0005634 GO:GO:0005737 GO:GO:0008565
GO:GO:0006606 GO:GO:0006370 GO:GO:0004484 CTD:10073
eggNOG:NOG317385 GeneTree:ENSGT00510000047494 HOGENOM:HOG000012990
HOVERGEN:HBG053257 KO:K13151 OMA:YHRQTHY OrthoDB:EOG4XH00J
GO:GO:0061015 EMBL:CR354425 EMBL:BC062858 IPI:IPI00490944
RefSeq:NP_955988.1 UniGene:Dr.3168 SMR:Q6P5J9 STRING:Q6P5J9
Ensembl:ENSDART00000012820 GeneID:324743 KEGG:dre:324743
InParanoid:Q6P5J9 NextBio:20808949 Uniprot:Q6P5J9
Length = 365
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 91/220 (41%), Positives = 129/220 (58%)
Query: 56 DPVPELEIEPESQPQQEAGPLTKDLDIRQASKLRGPEVRKWFASQLMLPEWMIDVPDRLS 115
D E E E +S Q E G + +++ KL P K +A+QLML EW++DVP LS
Sbjct: 74 DSEDEEEAEKKSL-QTENGADEEGMEVEPRKKL--P---KHYANQLMLSEWLVDVPADLS 127
Query: 116 HDWYVFARPAGKRCIVVSSNGTTVSRERNGSILHHFPSALPSGARTKDPSGSAQSYCILD 175
DW + P GKR +VV+S G+T S ++G ++ FPS +P G R G + Y ILD
Sbjct: 128 SDWLMVVCPVGKRSLVVASKGSTTSYTKSGYCVNRFPSLIPGGNRHNSALG--KDYTILD 185
Query: 176 CIFHELDQTYYVIDMVCWRGYSLYDCTAEFRFFWLNSKLAETGACDAPSHYYKFRFSTVP 235
CI+ ++D+TYY++D++CWRG+ +YDC+ EFRF+WL SK+ E + S FRF +
Sbjct: 186 CIYSDVDRTYYILDVMCWRGHPVYDCSTEFRFYWLQSKVDEVESLSEISKINPFRFVALS 245
Query: 236 VYNCDQRGLYSAYIESVPYAKDGLLFYNKHAHYQTGNTPL 275
+C + A Y DGLLFY+K HY G+TPL
Sbjct: 246 SISCSTESIQMALAHEYSYKVDGLLFYHKETHYTPGSTPL 285
>UNIPROTKB|Q5ZI43 [details] [associations]
symbol:SNUPN "Snurportin-1" species:9031 "Gallus gallus"
[GO:0004484 "mRNA guanylyltransferase activity" evidence=IEA]
[GO:0006370 "7-methylguanosine mRNA capping" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0061015 "snRNA
import into nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR001339 InterPro:IPR002652
InterPro:IPR017336 InterPro:IPR024721 Pfam:PF01331 Pfam:PF11538
PIRSF:PIRSF037955 PROSITE:PS51214 GO:GO:0005634 GO:GO:0005737
GO:GO:0008565 GO:GO:0003723 GO:GO:0006606 GO:GO:0006370
GO:GO:0004484 CTD:10073 eggNOG:NOG317385 HOGENOM:HOG000012990
HOVERGEN:HBG053257 KO:K13151 GO:GO:0061015 EMBL:AJ720941
IPI:IPI00589131 RefSeq:NP_001074347.1 UniGene:Gga.2904
ProteinModelPortal:Q5ZI43 SMR:Q5ZI43 STRING:Q5ZI43 GeneID:770225
KEGG:gga:770225 NextBio:20920448 Uniprot:Q5ZI43
Length = 365
Score = 442 (160.7 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 79/186 (42%), Positives = 116/186 (62%)
Query: 90 GPEVRKWFASQLMLPEWMIDVPDRLSHDWYVFARPAGKRCIVVSSNGTTVSRERNGSILH 149
G + K +A+QLML EW++DVP L +W V P GKR +VV+S G+T + ++G ++
Sbjct: 93 GRRLPKRYANQLMLSEWLVDVPVDLEQEWIVVVCPVGKRALVVASRGSTAAYTKSGFCVN 152
Query: 150 HFPSALPSGARTKDPSGSAQSYCILDCIFHELDQTYYVIDMVCWRGYSLYDCTAEFRFFW 209
FPS LP G R + + + YCILDCI++E +QTYY++D++CWRG+ +YDC +FRFFW
Sbjct: 153 RFPSLLPGGNRHN--TMNEKVYCILDCIYNEAEQTYYILDVMCWRGHPVYDCQTDFRFFW 210
Query: 210 LNSKLAETGACDAPSHYYKFRFSTVPVYNCDQRGLYSAYIESVPYAKDGLLFYNKHAHYQ 269
L+SK+ E S ++F + + C L + P+ DGLLFY+K HY
Sbjct: 211 LSSKIQEEEGLGEKSRINPYKFVGLQNFPCTSESLCEVLTTNFPFEVDGLLFYHKQTHYT 270
Query: 270 TGNTPL 275
G+TPL
Sbjct: 271 PGSTPL 276
>UNIPROTKB|Q2TBK8 [details] [associations]
symbol:SNUPN "Snurportin-1" species:9913 "Bos taurus"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0061015
"snRNA import into nucleus" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006606 "protein import
into nucleus" evidence=IEA] InterPro:IPR002652 InterPro:IPR017336
InterPro:IPR024721 Pfam:PF11538 PIRSF:PIRSF037955 PROSITE:PS51214
GO:GO:0005634 GO:GO:0005737 GO:GO:0008565 GO:GO:0003723
GO:GO:0006606 EMBL:BC109999 IPI:IPI00705795 RefSeq:NP_001033635.1
UniGene:Bt.26566 ProteinModelPortal:Q2TBK8 SMR:Q2TBK8 STRING:Q2TBK8
PRIDE:Q2TBK8 Ensembl:ENSBTAT00000028371 GeneID:515588
KEGG:bta:515588 CTD:10073 eggNOG:NOG317385
GeneTree:ENSGT00510000047494 HOGENOM:HOG000012990
HOVERGEN:HBG053257 InParanoid:Q2TBK8 KO:K13151 OMA:YHRQTHY
OrthoDB:EOG4XH00J NextBio:20871906 GO:GO:0061015 Uniprot:Q2TBK8
Length = 362
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 81/186 (43%), Positives = 113/186 (60%)
Query: 90 GPEVRKWFASQLMLPEWMIDVPDRLSHDWYVFARPAGKRCIVVSSNGTTVSRERNGSILH 149
G E+ K +A+QLML EW+IDVP L +W V P GKR ++V+S G T + ++G ++
Sbjct: 92 GKELPKRYANQLMLSEWLIDVPSDLGQEWIVVVCPVGKRSLIVASQGLTSAYTKSGYCVN 151
Query: 150 HFPSALPSGARTKDPSGSAQSYCILDCIFHELDQTYYVIDMVCWRGYSLYDCTAEFRFFW 209
FPS LP G R S + + Y ILDCI+ E++QTYYV+D++CWRG+ YDC +FRF+W
Sbjct: 152 TFPSLLPGGNRRN--STTEKDYTILDCIYSEVNQTYYVLDVMCWRGHPFYDCQTDFRFYW 209
Query: 210 LNSKLAETGACDAPSHYYKFRFSTVPVYNCDQRGLYSAYIESVPYAKDGLLFYNKHAHYQ 269
L+SKL E + F+F + + C L P+ DGLLFY+K HY
Sbjct: 210 LHSKLPEEEGLGEKTKRNPFKFVGLKNFPCTPESLCKVLSMDFPFEVDGLLFYHKQTHYS 269
Query: 270 TGNTPL 275
G+TPL
Sbjct: 270 PGSTPL 275
>UNIPROTKB|E2RL29 [details] [associations]
symbol:SNUPN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0061015 "snRNA import into nucleus"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR002652 InterPro:IPR017336
InterPro:IPR024721 Pfam:PF11538 PIRSF:PIRSF037955 PROSITE:PS51214
GO:GO:0005634 GO:GO:0005737 GO:GO:0008565 GO:GO:0006606 CTD:10073
GeneTree:ENSGT00510000047494 KO:K13151 OMA:YHRQTHY GO:GO:0061015
EMBL:AAEX03016332 EMBL:AAEX03016333 RefSeq:XP_544780.2
Ensembl:ENSCAFT00000028653 GeneID:487655 KEGG:cfa:487655
Uniprot:E2RL29
Length = 358
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 85/210 (40%), Positives = 126/210 (60%)
Query: 66 ESQPQQEAGPLTKDLDIRQASKLRGPEVRKWFASQLMLPEWMIDVPDRLSHDWYVFARPA 125
ES+ +++ +++DI KL P K +A+QLML EW+IDVP L +W V P
Sbjct: 74 ESEEEEDKKD-DEEMDIDAVKKL--P---KRYANQLMLSEWLIDVPSDLGQEWIVVVCPV 127
Query: 126 GKRCIVVSSNGTTVSRERNGSILHHFPSALPSGARTKDPSGSAQSYCILDCIFHELDQTY 185
GKR ++V+S G+T + ++G ++ F S LP G K S +A+ Y ILDCI+ E++QTY
Sbjct: 128 GKRALIVASRGSTSAYTKSGYCVNRFSSLLPGG--NKRNSTTAKDYTILDCIYSEVNQTY 185
Query: 186 YVIDMVCWRGYSLYDCTAEFRFFWLNSKLAETGACDAPSHYYKFRFSTVPVYNCDQRGLY 245
YV+D++CWRG+ YDC +FRF+W++SKL E + + F+F + + C L
Sbjct: 186 YVLDVMCWRGHPFYDCQTDFRFYWMHSKLPEEEGLEEKTKLNPFKFVGLKNFPCTPESLC 245
Query: 246 SAYIESVPYAKDGLLFYNKHAHYQTGNTPL 275
P+ DGLLFY+K HY G+TPL
Sbjct: 246 KVLSMDFPFEVDGLLFYHKQTHYSPGSTPL 275
>UNIPROTKB|F1SJ72 [details] [associations]
symbol:SNUPN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0061015 "snRNA import into nucleus" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002652 InterPro:IPR017336 InterPro:IPR024721
Pfam:PF11538 PIRSF:PIRSF037955 PROSITE:PS51214 GO:GO:0005634
GO:GO:0005737 GO:GO:0008565 GO:GO:0006606
GeneTree:ENSGT00510000047494 OMA:YHRQTHY GO:GO:0061015
EMBL:CU582918 Ensembl:ENSSSCT00000002102 Uniprot:F1SJ72
Length = 363
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 86/210 (40%), Positives = 125/210 (59%)
Query: 66 ESQPQQEAGPLTKDLDIRQASKLRGPEVRKWFASQLMLPEWMIDVPDRLSHDWYVFARPA 125
ES+ ++E +++DI KL P K +A+QLML EW+IDVP L +W V P
Sbjct: 75 ESEEEEEKKD-DEEMDIDIGKKL--P---KHYANQLMLSEWLIDVPSDLGQEWIVVVCPV 128
Query: 126 GKRCIVVSSNGTTVSRERNGSILHHFPSALPSGARTKDPSGSAQSYCILDCIFHELDQTY 185
GKR ++V+S G+T + ++G ++ F S LP G R S +A+ Y ILDCI+ E++QTY
Sbjct: 129 GKRALIVASRGSTSAYTKSGYCVNRFSSLLPGGNRRN--STTAKDYTILDCIYSEVNQTY 186
Query: 186 YVIDMVCWRGYSLYDCTAEFRFFWLNSKLAETGACDAPSHYYKFRFSTVPVYNCDQRGLY 245
YV+D++CWRG+ YDC +FRF+W++SKL E + F+F + + C L
Sbjct: 187 YVLDVMCWRGHPFYDCQTDFRFYWMHSKLPEEEGLGEKTKLNPFKFVGLKNFPCTPESLC 246
Query: 246 SAYIESVPYAKDGLLFYNKHAHYQTGNTPL 275
P+ DGLLFY+K HY G+TPL
Sbjct: 247 EVLSMDFPFEVDGLLFYHKQTHYSPGSTPL 276
>RGD|1303191 [details] [associations]
symbol:Snupn "snurportin 1" species:10116 "Rattus norvegicus"
[GO:0000339 "RNA cap binding" evidence=TAS] [GO:0005643 "nuclear
pore" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005846 "nuclear cap binding complex" evidence=TAS] [GO:0006606
"protein import into nucleus" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0061015 "snRNA import into
nucleus" evidence=IEA] InterPro:IPR002652 InterPro:IPR017336
InterPro:IPR024721 Pfam:PF11538 PIRSF:PIRSF037955 PROSITE:PS51214
RGD:1303191 GO:GO:0005737 GO:GO:0008565 GO:GO:0005643 GO:GO:0006606
GO:GO:0000339 GO:GO:0005846 CTD:10073 eggNOG:NOG317385
GeneTree:ENSGT00510000047494 HOGENOM:HOG000012990
HOVERGEN:HBG053257 KO:K13151 OMA:YHRQTHY OrthoDB:EOG4XH00J
GO:GO:0061015 EMBL:BC079451 IPI:IPI00371325 RefSeq:NP_001004270.1
UniGene:Rn.46302 ProteinModelPortal:Q68FP5 SMR:Q68FP5 STRING:Q68FP5
Ensembl:ENSRNOT00000007261 GeneID:316108 KEGG:rno:316108
UCSC:RGD:1303191 InParanoid:Q68FP5 NextBio:670445
Genevestigator:Q68FP5 GermOnline:ENSRNOG00000005426 Uniprot:Q68FP5
Length = 358
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 83/198 (41%), Positives = 119/198 (60%)
Query: 78 KDLDIRQASKLRGPEVRKWFASQLMLPEWMIDVPDRLSHDWYVFARPAGKRCIVVSSNGT 137
+++D+ KL P K +A+QLML EW+IDVP L +W V P GKR ++V+S G+
Sbjct: 85 EEMDLDPVKKL--P---KRYANQLMLSEWLIDVPSDLGQEWIVVVCPVGKRALIVASRGS 139
Query: 138 TVSRERNGSILHHFPSALPSGARTKDPSGSAQSYCILDCIFHELDQTYYVIDMVCWRGYS 197
T + ++G ++ F S LP G R S +A+ Y ILDCI+ E++QTYYV+D++CWRG+
Sbjct: 140 TSAYTKSGYCVNRFSSLLPGGNRRN--STTAKDYTILDCIYSEVNQTYYVLDVMCWRGHP 197
Query: 198 LYDCTAEFRFFWLNSKLAETGACDAPSHYYKFRFSTVPVYNCDQRGLYSAYIESVPYAKD 257
YDC +FRF+W+NSKL E + F+F + + C L P+ D
Sbjct: 198 FYDCQTDFRFYWMNSKLPEEEGLGEKTKINPFKFVGLKNFPCTPESLCKVLSMDFPFEVD 257
Query: 258 GLLFYNKHAHYQTGNTPL 275
GLLFY+K HY G+TPL
Sbjct: 258 GLLFYHKQTHYSPGSTPL 275
>MGI|MGI:1913319 [details] [associations]
symbol:Snupn "snurportin 1" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006606 "protein import
into nucleus" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0061015 "snRNA import into nucleus" evidence=IEA]
InterPro:IPR002652 InterPro:IPR017336 InterPro:IPR024721
Pfam:PF11538 PIRSF:PIRSF037955 PROSITE:PS51214 MGI:MGI:1913319
GO:GO:0005634 GO:GO:0005737 GO:GO:0008565 GO:GO:0003723
GO:GO:0006606 CTD:10073 eggNOG:NOG317385
GeneTree:ENSGT00510000047494 HOGENOM:HOG000012990
HOVERGEN:HBG053257 KO:K13151 OMA:YHRQTHY OrthoDB:EOG4XH00J
GO:GO:0061015 EMBL:AK155315 EMBL:BC049638 EMBL:BC061258
IPI:IPI00330516 RefSeq:NP_848461.1 UniGene:Mm.220984
ProteinModelPortal:Q80W37 SMR:Q80W37 STRING:Q80W37
PhosphoSite:Q80W37 PRIDE:Q80W37 Ensembl:ENSMUST00000068856
GeneID:66069 KEGG:mmu:66069 UCSC:uc009ptr.1 InParanoid:Q80W37
NextBio:320532 Bgee:Q80W37 CleanEx:MM_SNUPN Genevestigator:Q80W37
GermOnline:ENSMUSG00000055334 Uniprot:Q80W37
Length = 358
Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
Identities = 83/198 (41%), Positives = 120/198 (60%)
Query: 78 KDLDIRQASKLRGPEVRKWFASQLMLPEWMIDVPDRLSHDWYVFARPAGKRCIVVSSNGT 137
+++DI + KL P K +A+QLML EW+IDVP L +W V P GKR ++V+S G+
Sbjct: 85 EEMDIDPSKKL--P---KRYANQLMLSEWLIDVPSDLGQEWIVVVCPVGKRALIVASRGS 139
Query: 138 TVSRERNGSILHHFPSALPSGARTKDPSGSAQSYCILDCIFHELDQTYYVIDMVCWRGYS 197
T + ++G ++ F S LP G R S +A+ Y ILDCI+ E++QTYYV+D++CWRG+
Sbjct: 140 TSAYTKSGYCVNRFSSLLPGGNRRN--STTAKDYTILDCIYSEVNQTYYVLDVMCWRGHP 197
Query: 198 LYDCTAEFRFFWLNSKLAETGACDAPSHYYKFRFSTVPVYNCDQRGLYSAYIESVPYAKD 257
YDC +FRF+W++SKL E + F+F + + C L P+ D
Sbjct: 198 FYDCQTDFRFYWMHSKLPEEEGLGEKTKINPFKFVGLKNFPCTPESLCEVLSMDFPFEVD 257
Query: 258 GLLFYNKHAHYQTGNTPL 275
GLLFY+K HY G+TPL
Sbjct: 258 GLLFYHKQTHYSPGSTPL 275
>UNIPROTKB|C9K0X5 [details] [associations]
symbol:SNUPN "Snurportin-1" species:9606 "Homo sapiens"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0061015 "snRNA import into nucleus" evidence=IEA]
InterPro:IPR002652 InterPro:IPR017336 InterPro:IPR024721
Pfam:PF11538 PIRSF:PIRSF037955 PROSITE:PS51214 GO:GO:0005634
GO:GO:0005737 GO:GO:0008565 GO:GO:0006606 EMBL:AC105020 OMA:YHRQTHY
GO:GO:0061015 HGNC:HGNC:14245 EMBL:AC105036 IPI:IPI00024299
ProteinModelPortal:C9K0X5 SMR:C9K0X5 STRING:C9K0X5 PRIDE:C9K0X5
Ensembl:ENST00000371091 UCSC:uc002bap.3 ArrayExpress:C9K0X5
Bgee:C9K0X5 Uniprot:C9K0X5
Length = 402
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 82/198 (41%), Positives = 120/198 (60%)
Query: 78 KDLDIRQASKLRGPEVRKWFASQLMLPEWMIDVPDRLSHDWYVFARPAGKRCIVVSSNGT 137
+++DI KL P K +A+QLML EW+IDVP L +W V P GKR ++V+S G+
Sbjct: 126 EEMDIDTVKKL--P---KHYANQLMLSEWLIDVPSDLGQEWIVVVCPVGKRALIVASRGS 180
Query: 138 TVSRERNGSILHHFPSALPSGARTKDPSGSAQSYCILDCIFHELDQTYYVIDMVCWRGYS 197
T + ++G ++ F S LP G R + +A+ Y ILDCI++E++QTYYV+D++CWRG+
Sbjct: 181 TSAYTKSGYCVNRFSSLLPGGNRR---NSTAKDYTILDCIYNEVNQTYYVLDVMCWRGHP 237
Query: 198 LYDCTAEFRFFWLNSKLAETGACDAPSHYYKFRFSTVPVYNCDQRGLYSAYIESVPYAKD 257
YDC +FRF+W++SKL E + F+F + + C L P+ D
Sbjct: 238 FYDCQTDFRFYWMHSKLPEEEGLGEKTKLNPFKFVGLKNFPCTPESLCDVLSMDFPFEVD 297
Query: 258 GLLFYNKHAHYQTGNTPL 275
GLLFY+K HY G+TPL
Sbjct: 298 GLLFYHKQTHYSPGSTPL 315
>UNIPROTKB|O95149 [details] [associations]
symbol:SNUPN "Snurportin-1" species:9606 "Homo sapiens"
[GO:0006606 "protein import into nucleus" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0061015 "snRNA
import into nucleus" evidence=IEA] [GO:0000339 "RNA cap binding"
evidence=TAS] [GO:0005643 "nuclear pore" evidence=TAS] [GO:0000387
"spliceosomal snRNP assembly" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0034660
"ncRNA metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR002652 InterPro:IPR017336
InterPro:IPR024721 Pfam:PF11538 PIRSF:PIRSF037955 PROSITE:PS51214
GO:GO:0005829 GO:GO:0008565 GO:GO:0005643 GO:GO:0006606
EMBL:CH471136 GO:GO:0000387 GO:GO:0034660 GO:GO:0000339 PDB:2P8Q
PDB:2Q5D PDB:2QNA PDB:3LWW PDBsum:2P8Q PDBsum:2Q5D PDBsum:2QNA
PDBsum:3LWW PDB:3GJX PDB:3NBY PDB:3NBZ PDB:3NC0 PDBsum:3GJX
PDBsum:3NBY PDBsum:3NBZ PDBsum:3NC0 CTD:10073 eggNOG:NOG317385
HOGENOM:HOG000012990 HOVERGEN:HBG053257 KO:K13151 OrthoDB:EOG4XH00J
GO:GO:0061015 EMBL:AF039029 EMBL:CR456811 EMBL:AK289475
EMBL:BC004203 IPI:IPI00939743 RefSeq:NP_001036046.1
RefSeq:NP_001036053.1 RefSeq:NP_005692.1 UniGene:Hs.21577 PDB:1XK5
PDB:3GB8 PDBsum:1XK5 PDBsum:3GB8 ProteinModelPortal:O95149
SMR:O95149 DIP:DIP-48513N IntAct:O95149 MINT:MINT-1378592
STRING:O95149 PhosphoSite:O95149 PaxDb:O95149 PeptideAtlas:O95149
PRIDE:O95149 DNASU:10073 Ensembl:ENST00000308588
Ensembl:ENST00000564644 Ensembl:ENST00000564675
Ensembl:ENST00000567134 GeneID:10073 KEGG:hsa:10073 UCSC:uc002ban.3
GeneCards:GC15M075890 HGNC:HGNC:14245 HPA:CAB005004 MIM:607902
neXtProt:NX_O95149 PharmGKB:PA34611 InParanoid:O95149
PhylomeDB:O95149 EvolutionaryTrace:O95149 GenomeRNAi:10073
NextBio:38077 ArrayExpress:O95149 Bgee:O95149 CleanEx:HS_SNUPN
Genevestigator:O95149 GermOnline:ENSG00000169371 Uniprot:O95149
Length = 360
Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
Identities = 82/198 (41%), Positives = 120/198 (60%)
Query: 78 KDLDIRQASKLRGPEVRKWFASQLMLPEWMIDVPDRLSHDWYVFARPAGKRCIVVSSNGT 137
+++DI KL P K +A+QLML EW+IDVP L +W V P GKR ++V+S G+
Sbjct: 84 EEMDIDTVKKL--P---KHYANQLMLSEWLIDVPSDLGQEWIVVVCPVGKRALIVASRGS 138
Query: 138 TVSRERNGSILHHFPSALPSGARTKDPSGSAQSYCILDCIFHELDQTYYVIDMVCWRGYS 197
T + ++G ++ F S LP G R + +A+ Y ILDCI++E++QTYYV+D++CWRG+
Sbjct: 139 TSAYTKSGYCVNRFSSLLPGGNRR---NSTAKDYTILDCIYNEVNQTYYVLDVMCWRGHP 195
Query: 198 LYDCTAEFRFFWLNSKLAETGACDAPSHYYKFRFSTVPVYNCDQRGLYSAYIESVPYAKD 257
YDC +FRF+W++SKL E + F+F + + C L P+ D
Sbjct: 196 FYDCQTDFRFYWMHSKLPEEEGLGEKTKLNPFKFVGLKNFPCTPESLCDVLSMDFPFEVD 255
Query: 258 GLLFYNKHAHYQTGNTPL 275
GLLFY+K HY G+TPL
Sbjct: 256 GLLFYHKQTHYSPGSTPL 273
>UNIPROTKB|H3BRI5 [details] [associations]
symbol:SNUPN "Snurportin-1" species:9606 "Homo sapiens"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] InterPro:IPR002652 InterPro:IPR024721 Pfam:PF11538
PROSITE:PS51214 GO:GO:0005634 GO:GO:0005737 GO:GO:0008565
GO:GO:0006606 EMBL:AC105020 HGNC:HGNC:14245 EMBL:AC105036
Ensembl:ENST00000569817 Bgee:H3BRI5 Uniprot:H3BRI5
Length = 210
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 61/135 (45%), Positives = 92/135 (68%)
Query: 78 KDLDIRQASKLRGPEVRKWFASQLMLPEWMIDVPDRLSHDWYVFARPAGKRCIVVSSNGT 137
+++DI KL P K +A+QLML EW+IDVP L +W V P GKR ++V+S G+
Sbjct: 84 EEMDIDTVKKL--P---KHYANQLMLSEWLIDVPSDLGQEWIVVVCPVGKRALIVASRGS 138
Query: 138 TVSRERNGSILHHFPSALPSGARTKDPSGSAQSYCILDCIFHELDQTYYVIDMVCWRGYS 197
T + ++G ++ F S LP G R + +A+ Y ILDCI++E++QTYYV+D++CWRG+
Sbjct: 139 TSAYTKSGYCVNRFSSLLPGGNRR---NSTAKDYTILDCIYNEVNQTYYVLDVMCWRGHP 195
Query: 198 LYDCTAEFRFFWLNS 212
YDC +FRF+W++S
Sbjct: 196 FYDCQTDFRFYWMHS 210
>WB|WBGene00017746 [details] [associations]
symbol:F23F1.5 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0061015 "snRNA import into nucleus" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR002652
InterPro:IPR012310 InterPro:IPR017336 InterPro:IPR024721
Pfam:PF11538 PIRSF:PIRSF037955 PROSITE:PS50160 PROSITE:PS51214
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0008565 GO:GO:0006281 GO:GO:0040011 GO:GO:0000003
GO:GO:0006606 GO:GO:0006310 GO:GO:0003910 EMBL:FO080251
eggNOG:NOG317385 GeneTree:ENSGT00510000047494 HOGENOM:HOG000012990
KO:K13151 OMA:YHRQTHY GO:GO:0061015 PIR:T32263 RefSeq:NP_493639.1
UniGene:Cel.15314 ProteinModelPortal:O17066 DIP:DIP-25169N
IntAct:O17066 MINT:MINT-1069287 STRING:O17066 PaxDb:O17066
EnsemblMetazoa:F23F1.5 GeneID:173383 KEGG:cel:CELE_F23F1.5
UCSC:F23F1.5 CTD:173383 WormBase:F23F1.5 InParanoid:O17066
NextBio:879411 Uniprot:O17066
Length = 322
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 67/182 (36%), Positives = 100/182 (54%)
Query: 95 KWFASQLMLPEWMIDVPDRLSHDWYVFARPAGKRCIVVSSNGTTVSRERNGSILHHFPSA 154
K +A ++ML EW++D+P+ LS DW + P GKR +VV+S G TV+ + G + F S
Sbjct: 95 KKYADKMMLSEWLVDIPESLSSDWTMVMAPVGKRTLVVASRGFTVAYNKGGREVSRFQSR 154
Query: 155 LPSG-ARTKDPSGSAQSYCILDCIFHELDQTYYVIDMVCWRGYSLYDCTAEFRFFWLNSK 213
LP G R K+ Q++ ILDCI+ +QTYYV+D++ W + + +FR F L SK
Sbjct: 155 LPGGNTRAKN-----QAWTILDCIYS--NQTYYVLDLLSWNAHEYVESPYDFRQFMLKSK 207
Query: 214 LAETGACDAPSHYYKFRFSTVPVYNCDQRGLYSAYIESVPYAKDGLLFYNKHAHYQTGNT 273
L E + ++ FS +P C Q + + + DGLLFY+ YQ G +
Sbjct: 208 LEEAPELAKSTPGFRNIFSPIPSCPCSQDQMAELMKNEISFRLDGLLFYHNSVVYQPGQS 267
Query: 274 PL 275
PL
Sbjct: 268 PL 269
>UNIPROTKB|E1BWZ6 [details] [associations]
symbol:SNUPN "Snurportin-1" species:9031 "Gallus gallus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0061015 "snRNA import into nucleus" evidence=IEA]
InterPro:IPR002652 InterPro:IPR017336 InterPro:IPR024721
Pfam:PF11538 PIRSF:PIRSF037955 PROSITE:PS51214 GO:GO:0005634
GO:GO:0005737 GO:GO:0008565 GO:GO:0006606
GeneTree:ENSGT00510000047494 OMA:YHRQTHY GO:GO:0061015
EMBL:AADN02074781 EMBL:AADN02074782 EMBL:AADN02074783
IPI:IPI00681867 Ensembl:ENSGALT00000002558 Uniprot:E1BWZ6
Length = 366
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 65/187 (34%), Positives = 96/187 (51%)
Query: 90 GPEVRKWFASQLMLPEWMIDVPDRLSHDWYVFARPAGKRCIVVSSNGTTVSRERNGSILH 149
G + K +A+QLML EW++DVP L +W V P GKR +VV+S G+T + ++G ++
Sbjct: 93 GRRLPKRYANQLMLSEWLVDVPVDLEQEWIVVVCPVGKRALVVASRGSTAAYTKSGFCVN 152
Query: 150 HFPSALPSGARTKDPSGSAQSYCILDCIFHELDQTYYVIDMVCWRGY-SLYDCTAEFRFF 208
FPS LP G R + A + C + TY ++ + GY +FRFF
Sbjct: 153 RFPSLLPGGNRHNTMNEKA--FTCAPCSGSSVPVTYSIVTVEILGGYLEKEQRLTDFRFF 210
Query: 209 WLNSKLAETGACDAPSHYYKFRFSTVPVYNCDQRGLYSAYIESVPYAKDGLLFYNKHAHY 268
WL+SK+ E S ++F + + C L + P+ DGLLFY+K HY
Sbjct: 211 WLSSKIQEEEGLGEKSRINPYKFVGLQNFPCTSESLCEVLTTNFPFEVDGLLFYHKQTHY 270
Query: 269 QTGNTPL 275
G+TPL
Sbjct: 271 TPGSTPL 277
>UNIPROTKB|F1NVH6 [details] [associations]
symbol:SNUPN "Snurportin-1" species:9031 "Gallus gallus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0061015 "snRNA import into nucleus" evidence=IEA]
InterPro:IPR002652 InterPro:IPR017336 InterPro:IPR024721
Pfam:PF11538 PIRSF:PIRSF037955 PROSITE:PS51214 GO:GO:0005634
GO:GO:0005737 GO:GO:0008565 GO:GO:0006606
GeneTree:ENSGT00510000047494 GO:GO:0061015 IPI:IPI00589131
EMBL:AADN02074781 EMBL:AADN02074782 EMBL:AADN02074783
Ensembl:ENSGALT00000034782 Uniprot:F1NVH6
Length = 365
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 63/186 (33%), Positives = 96/186 (51%)
Query: 90 GPEVRKWFASQLMLPEWMIDVPDRLSHDWYVFARPAGKRCIVVSSNGTTVSRERNGSILH 149
G + K +A+QLML EW++DVP L +W V P GKR +VV+S G+T + ++G ++
Sbjct: 93 GRRLPKRYANQLMLSEWLVDVPVDLEQEWIVVVCPVGKRALVVASRGSTAAYTKSGFCVN 152
Query: 150 HFPSALPSGARTKDPSGSAQSYCILDCIFHELDQTYYVIDMVCWRGYSLYDCTAEFRFFW 209
FPS LP G R + ++ +LD I ++ + W + +FRFFW
Sbjct: 153 RFPSLLPGGNR-HNTMNEKDTF-MLDNISSTAYSMMFISTLFTWIFHLCSSVPTDFRFFW 210
Query: 210 LNSKLAETGACDAPSHYYKFRFSTVPVYNCDQRGLYSAYIESVPYAKDGLLFYNKHAHYQ 269
L+SK+ E S ++F + + C L + P+ DGLLFY+K HY
Sbjct: 211 LSSKIQEEEGLGEKSRINPYKFVGLQNFPCTSESLCEVLTTNFPFEVDGLLFYHKQTHYT 270
Query: 270 TGNTPL 275
G+TPL
Sbjct: 271 PGSTPL 276
>UNIPROTKB|H3BSK1 [details] [associations]
symbol:SNUPN "Snurportin-1" species:9606 "Homo sapiens"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] InterPro:IPR002652 InterPro:IPR024721 Pfam:PF11538
PROSITE:PS51214 GO:GO:0005634 GO:GO:0005737 GO:GO:0008565
GO:GO:0006606 EMBL:AC105020 HGNC:HGNC:14245 EMBL:AC105036
Ensembl:ENST00000564086 Bgee:H3BSK1 Uniprot:H3BSK1
Length = 136
Score = 122 (48.0 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 78 KDLDIRQASKLRGPEVRKWFASQLMLPEWMIDVPDRLSHDWYVFARPAGKRCIVVSS 134
+++DI KL P K +A+QLML EW+IDVP L +W V P GKR ++V+S
Sbjct: 84 EEMDIDTVKKL--P---KHYANQLMLSEWLIDVPSDLGQEWIVVVCPVGKRALIVAS 135
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.421 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 419 388 0.00093 117 3 11 22 0.40 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 623 (66 KB)
Total size of DFA: 279 KB (2146 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.49u 0.08s 31.57t Elapsed: 00:00:05
Total cpu time: 31.50u 0.08s 31.58t Elapsed: 00:00:05
Start: Mon May 20 15:43:07 2013 End: Mon May 20 15:43:12 2013