Query         014753
Match_columns 419
No_of_seqs    163 out of 439
Neff          2.7 
Searched_HMMs 46136
Date          Fri Mar 29 08:11:18 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014753.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014753hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 PLN03162 golden-2 like transcr  99.9 1.1E-23 2.4E-28  210.7   6.7   63  242-305   230-292 (526)
  2 TIGR01557 myb_SHAQKYF myb-like  99.8 1.7E-21 3.6E-26  149.2   6.4   56  247-302     1-56  (57)
  3 PF00249 Myb_DNA-binding:  Myb-  97.3 0.00071 1.5E-08   48.9   5.3   48  249-300     1-48  (48)
  4 PF14379 Myb_CC_LHEQLE:  MYB-CC  95.2 0.00045 9.8E-09   53.4  -5.7   34  325-358     3-45  (51)
  5 smart00426 TEA TEA domain.      86.5    0.75 1.6E-05   37.8   3.1   46  251-298     5-67  (68)
  6 smart00717 SANT SANT  SWI3, AD  60.0      39 0.00086   22.5   5.6   45  250-299     2-46  (49)
  7 PF01285 TEA:  TEA/ATTS domain   58.6     9.5 0.00021   40.1   3.4   54  245-299    45-112 (431)
  8 PF12776 Myb_DNA-bind_3:  Myb/S  55.7      15 0.00032   29.2   3.3   51  251-301     1-63  (96)
  9 cd00167 SANT 'SWI3, ADA2, N-Co  54.1      53  0.0011   21.6   5.4   44  251-299     1-44  (45)
 10 smart00501 BRIGHT BRIGHT, ARID  43.5      22 0.00049   28.8   2.7   44  255-299    33-83  (93)
 11 TIGR02894 DNA_bind_RsfA transc  41.7      15 0.00033   34.5   1.6   54  242-301    41-94  (161)
 12 PF11888 DUF3408:  Protein of u  39.7      35 0.00077   30.1   3.5   61  229-302    65-125 (136)
 13 PF07384 DUF1497:  Protein of u  36.9      30 0.00066   27.7   2.3   22  250-271    36-57  (59)
 14 KOG3841 TEF-1 and related tran  26.3      38 0.00082   36.2   1.7   71  229-303    58-145 (455)

No 1  
>PLN03162 golden-2 like transcription factor; Provisional
Probab=99.89  E-value=1.1e-23  Score=210.68  Aligned_cols=63  Identities=46%  Similarity=0.729  Sum_probs=59.3

Q ss_pred             cCCCCCCCcccCHHHHHHHHHHHHHhCCCCCCChHHHHhhcCCCCccHHHHHHhhhhhhccccC
Q 014753          242 KRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTT  305 (419)
Q Consensus       242 krs~kKpRlrWT~ELH~rFV~AVeqLGG~dkAtPK~ILelMnV~gLTr~hVkSHLQKYRl~k~t  305 (419)
                      ....||+||+||+|||+|||+||++|| .+|||||+||++|+|+|||++||||||||||+.++.
T Consensus       230 ~~g~KKpRLrWTpELH~rFVeAV~qLG-~dKATPK~ILelMnV~GLTRenVKSHLQKYRl~rk~  292 (526)
T PLN03162        230 APGKKKAKVDWTPELHRRFVHAVEQLG-VEKAFPSRILELMGVQCLTRHNIASHLQKYRSHRRH  292 (526)
T ss_pred             CCCCCCCcccCCHHHHHHHHHHHHHhC-cCccchHHHHHHcCCCCcCHHHHHHHHHHHHHhccc
Confidence            445789999999999999999999999 799999999999999999999999999999998773


No 2  
>TIGR01557 myb_SHAQKYF myb-like DNA-binding domain, SHAQKYF class. This model describes a DNA-binding domain restricted to (but common in) plant proteins, many of which also contain a response regulator domain. The domain appears related to the Myb-like DNA-binding domain described by Pfam model pfam00249. It is distinguished in part by a well-conserved motif SH[AL]QKY[RF] at the C-terminal end of the motif.
Probab=99.85  E-value=1.7e-21  Score=149.17  Aligned_cols=56  Identities=55%  Similarity=0.844  Sum_probs=54.1

Q ss_pred             CCCcccCHHHHHHHHHHHHHhCCCCCCChHHHHhhcCCCCccHHHHHHhhhhhhcc
Q 014753          247 APRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTV  302 (419)
Q Consensus       247 KpRlrWT~ELH~rFV~AVeqLGG~dkAtPK~ILelMnV~gLTr~hVkSHLQKYRl~  302 (419)
                      |+|++||+|+|++||+||+.||+.+.|+||+|+++|++++||+.+|+|||||||+.
T Consensus         1 k~r~~WT~eeh~~Fl~ai~~~G~g~~a~pk~I~~~~~~~~lT~~qV~SH~QKy~~k   56 (57)
T TIGR01557         1 KPRVVWTEDLHDRFLQAVQKLGGPDWATPKRILELMVVDGLTRDQVASHLQKYRLK   56 (57)
T ss_pred             CCCCCCCHHHHHHHHHHHHHhCCCcccchHHHHHHcCCCCCCHHHHHHHHHHHHcc
Confidence            68999999999999999999998789999999999999999999999999999985


No 3  
>PF00249 Myb_DNA-binding:  Myb-like DNA-binding domain;  InterPro: IPR014778 The retroviral oncogene v-myb, and its cellular counterpart c-myb, encode nuclear DNA-binding proteins. These belong to the SANT domain family that specifically recognise the sequence YAAC(G/T)G [, ]. In myb, one of the most conserved regions consisting of three tandem repeats has been shown to be involved in DNA-binding [].; PDB: 1X41_A 2XAF_B 2XAG_B 2XAH_B 2UXN_B 2Y48_B 2XAQ_B 2X0L_B 2IW5_B 2XAJ_B ....
Probab=97.25  E-value=0.00071  Score=48.93  Aligned_cols=48  Identities=23%  Similarity=0.261  Sum_probs=41.6

Q ss_pred             CcccCHHHHHHHHHHHHHhCCCCCCChHHHHhhcCCCCccHHHHHHhhhhhh
Q 014753          249 RMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYR  300 (419)
Q Consensus       249 RlrWT~ELH~rFV~AVeqLGG~dkAtPK~ILelMnV~gLTr~hVkSHLQKYR  300 (419)
                      |..||+|=+.+|++||.++|.   -.-+.|.+.|+ .+-|..+|++|.++|+
T Consensus         1 r~~Wt~eE~~~l~~~v~~~g~---~~W~~Ia~~~~-~~Rt~~qc~~~~~~~~   48 (48)
T PF00249_consen    1 RGPWTEEEDEKLLEAVKKYGK---DNWKKIAKRMP-GGRTAKQCRSRYQNLL   48 (48)
T ss_dssp             S-SS-HHHHHHHHHHHHHSTT---THHHHHHHHHS-SSSTHHHHHHHHHHHT
T ss_pred             CCCCCHHHHHHHHHHHHHhCC---cHHHHHHHHcC-CCCCHHHHHHHHHhhC
Confidence            568999999999999999992   26899999998 8999999999999985


No 4  
>PF14379 Myb_CC_LHEQLE:  MYB-CC type transfactor, LHEQLE motif
Probab=95.22  E-value=0.00045  Score=53.40  Aligned_cols=34  Identities=18%  Similarity=0.297  Sum_probs=28.1

Q ss_pred             CCcccccccccCCCCCC--C-------ccccccCCCCCCcccc
Q 014753          325 DTSEDIMFGIQHPRRPE--T-------SSIQQQGRASNGLWSN  358 (419)
Q Consensus       325 d~SEALrlQiEvQRRle--l-------~sIeqQGk~~qtLWSN  358 (419)
                      .++|||++||||||||.  +       ++|+++|+|+++|...
T Consensus         3 ~i~EALr~QmEvQrrLhEQLEvQr~Lqlrieaqgkyl~~ilek   45 (51)
T PF14379_consen    3 QITEALRMQMEVQRRLHEQLEVQRHLQLRIEAQGKYLQSILEK   45 (51)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence            56899999999999983  2       6899999998877654


No 5  
>smart00426 TEA TEA domain.
Probab=86.47  E-value=0.75  Score=37.77  Aligned_cols=46  Identities=24%  Similarity=0.323  Sum_probs=30.1

Q ss_pred             ccCHHHHHHHHHHHHHhCCCCCCChH-HHHhh--c------------CC--CCccHHHHHHhhhh
Q 014753          251 RWTTTLHARFVHAVELLGGHERATPK-SVLEL--M------------DV--KDLTLAHVKSHLQM  298 (419)
Q Consensus       251 rWT~ELH~rFV~AVeqLGG~dkAtPK-~ILel--M------------nV--~gLTr~hVkSHLQK  298 (419)
                      +|.++|-..|++|++..-  ...+=| +++..  |            ..  .-=|+.+|+||||.
T Consensus         5 vWp~~lE~Af~~aL~~~~--~~g~~kik~~~r~k~~gRNelIs~YI~~~tGk~Rt~KQVsShIQv   67 (68)
T smart00426        5 VWSPDIEQAFQEALAIYP--PCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQV   67 (68)
T ss_pred             cCcHHHHHHHHHHHHHcC--ccCcccchhhhcCcccchhHHHHHHHHHHhCCccchhhhcchhee
Confidence            799999999999999875  222222 22221  0            11  23577889999885


No 6  
>smart00717 SANT SANT  SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains.
Probab=59.97  E-value=39  Score=22.46  Aligned_cols=45  Identities=11%  Similarity=0.175  Sum_probs=33.8

Q ss_pred             cccCHHHHHHHHHHHHHhCCCCCCChHHHHhhcCCCCccHHHHHHhhhhh
Q 014753          250 MRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMY  299 (419)
Q Consensus       250 lrWT~ELH~rFV~AVeqLGG~dkAtPK~ILelMnV~gLTr~hVkSHLQKY  299 (419)
                      -.||++=...|+.+|.++| .  ..=+.|.+.|+  +=|...|+.+..++
T Consensus         2 ~~Wt~~E~~~l~~~~~~~g-~--~~w~~Ia~~~~--~rt~~~~~~~~~~~   46 (49)
T smart00717        2 GEWTEEEDELLIELVKKYG-K--NNWEKIAKELP--GRTAEQCRERWNNL   46 (49)
T ss_pred             CCCCHHHHHHHHHHHHHHC-c--CCHHHHHHHcC--CCCHHHHHHHHHHH
Confidence            4699999999999999999 1  23466777765  77888887765443


No 7  
>PF01285 TEA:  TEA/ATTS domain family;  InterPro: IPR000818 Transcriptional enhancer activators are nuclear proteins that contain a TEA/ATTSdomain, a DNA-binding region of 66-68 amino acids. The TEA/ATTS domain is found in the N-termini of certain gene regulatory proteins, such as the Simian virus 40 (SV40) enhancer factor TEF-1, yeast trans-acting factor TEC-1 (which is required for TY1 enhancer activity), and the Aspergillus abaA regulatory gene product. SV40 and retroviral enhancers, and those to which TEF-1, TEC-1 and abaA proteins bind, contain GT-IIC sites: the TEA/ATTS domain may therefore recognise and bind such sites. Secondary structure predictions suggest the presence of 3 helices, but have not confirmed the presence of the helix-turn-helix motif characteristic of many DNA-binding proteins: DNA-binding may therefore be effected by a different mechanism [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3L15_B 2HZD_A 3KYS_A 3JUA_C 4EAZ_B.
Probab=58.62  E-value=9.5  Score=40.11  Aligned_cols=54  Identities=19%  Similarity=0.187  Sum_probs=29.2

Q ss_pred             CCCCCcccCHHHHHHHHHHHHHhCCCCCCChH--------------HHHhhcCCCCccHHHHHHhhhhh
Q 014753          245 MRAPRMRWTTTLHARFVHAVELLGGHERATPK--------------SVLELMDVKDLTLAHVKSHLQMY  299 (419)
Q Consensus       245 ~kKpRlrWT~ELH~rFV~AVeqLGG~dkAtPK--------------~ILelMnV~gLTr~hVkSHLQKY  299 (419)
                      ..+..-+|.+++...|++|+...-=..++.-+              .|...-| +.=|+.+|+||||..
T Consensus        45 ~~~~~~vw~~~~e~af~~al~~~~~~g~~k~~~~~~~~grn~li~~yi~~~tg-~~rt~kqvsshiqvl  112 (431)
T PF01285_consen   45 DGDGEGVWPPDIEQAFQEALAIYPPCGRRKLSDEGKMYGRNELISDYIKLKTG-KTRTRKQVSSHIQVL  112 (431)
T ss_dssp             -GGGS--S-HHHHHHHHHHHHHS-SSS---HHHH-----THHHHHHHHHHHHS-----SHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHhCCCCCCcccccccccccchhHHHHHHHHHhC-cccchhHHHHHHHHH
Confidence            35678899999999999999887411112211              1111111 346889999999998


No 8  
>PF12776 Myb_DNA-bind_3:  Myb/SANT-like DNA-binding domain;  InterPro: IPR024752 This domain, found in a range of uncharacterised proteins, may be related to Myb/SANT-like DNA binding domains.
Probab=55.73  E-value=15  Score=29.16  Aligned_cols=51  Identities=14%  Similarity=0.236  Sum_probs=34.4

Q ss_pred             ccCHHHHHHHHHHHHHh---CCC-CCCChH-----HHHhhcCC---CCccHHHHHHhhhhhhc
Q 014753          251 RWTTTLHARFVHAVELL---GGH-ERATPK-----SVLELMDV---KDLTLAHVKSHLQMYRT  301 (419)
Q Consensus       251 rWT~ELH~rFV~AVeqL---GG~-dkAtPK-----~ILelMnV---~gLTr~hVkSHLQKYRl  301 (419)
                      +||++..+.||+++-+.   |.. .....|     .|.+.|+-   -.+|..+|++|+...|.
T Consensus         1 ~Wt~~~~~~ll~~~~e~~~~g~~~~~~~fk~~~w~~i~~~~~~~~~~~~t~~qlknk~~~lk~   63 (96)
T PF12776_consen    1 SWTPEMTRFLLDLLIEQINKGNRPTNGGFKKEGWNNIAEEFNEKTGLNYTKKQLKNKWKTLKK   63 (96)
T ss_pred             CCChHHHHHHHHHHHHHHHhCCCCCCCCcCHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHH
Confidence            59999999999988433   433 233333     35555544   45889999999885543


No 9  
>cd00167 SANT 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is also found in regulatory transcriptional repressor complexes where it also binds DNA.
Probab=54.13  E-value=53  Score=21.61  Aligned_cols=44  Identities=14%  Similarity=0.195  Sum_probs=33.7

Q ss_pred             ccCHHHHHHHHHHHHHhCCCCCCChHHHHhhcCCCCccHHHHHHhhhhh
Q 014753          251 RWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMY  299 (419)
Q Consensus       251 rWT~ELH~rFV~AVeqLGG~dkAtPK~ILelMnV~gLTr~hVkSHLQKY  299 (419)
                      .||.+=...|+.++.++|-   ..=+.|.+.|+  +=|..+|+.+.+++
T Consensus         1 ~Wt~eE~~~l~~~~~~~g~---~~w~~Ia~~~~--~rs~~~~~~~~~~~   44 (45)
T cd00167           1 PWTEEEDELLLEAVKKYGK---NNWEKIAKELP--GRTPKQCRERWRNL   44 (45)
T ss_pred             CCCHHHHHHHHHHHHHHCc---CCHHHHHhHcC--CCCHHHHHHHHHHh
Confidence            4999999999999999992   33567777774  46888888776543


No 10 
>smart00501 BRIGHT BRIGHT, ARID (A/T-rich interaction domain) domain. DNA-binding domain containing a helix-turn-helix structure
Probab=43.48  E-value=22  Score=28.85  Aligned_cols=44  Identities=20%  Similarity=0.336  Sum_probs=31.8

Q ss_pred             HHHHHHHHHHHHhCCCCCCC----hHHHHhhcCCCCc---cHHHHHHhhhhh
Q 014753          255 TLHARFVHAVELLGGHERAT----PKSVLELMDVKDL---TLAHVKSHLQMY  299 (419)
Q Consensus       255 ELH~rFV~AVeqLGG~dkAt----PK~ILelMnV~gL---Tr~hVkSHLQKY  299 (419)
                      +|++.|. +|..+||.++.+    =+.|.+.|+++.-   ....++++-+||
T Consensus        33 dL~~Ly~-~V~~~GG~~~v~~~~~W~~Va~~lg~~~~~~~~~~~lk~~Y~k~   83 (93)
T smart00501       33 DLYRLYR-LVQERGGYDQVTKDKKWKEIARELGIPDTSTSAASSLRKHYERY   83 (93)
T ss_pred             cHHHHHH-HHHHccCHHHHcCCCCHHHHHHHhCCCcccchHHHHHHHHHHHH
Confidence            7999998 589999977543    3568889999752   245566766666


No 11 
>TIGR02894 DNA_bind_RsfA transcription factor, RsfA family. In a subset of endospore-forming members of the Firmcutes, members of this protein family are found, several to a genome. Two very strongly conserved sequences regions are separated by a highly variable linker region. Much of the linker region was excised from the seed alignment for this model. A characterized member is the prespore-specific transcription RsfA from Bacillus subtilis, previously called YwfN, which is controlled by sigma factor F and seems to fine-tune expression of some genes in the sigma-F regulon. A paralog in Bacillus subtilis is designated YlbO.
Probab=41.73  E-value=15  Score=34.50  Aligned_cols=54  Identities=31%  Similarity=0.434  Sum_probs=41.1

Q ss_pred             cCCCCCCCcccCHHHHHHHHHHHHHhCCCCCCChHHHHhhcCCCCccHHHHHHhhhhhhc
Q 014753          242 KRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT  301 (419)
Q Consensus       242 krs~kKpRlrWT~ELH~rFV~AVeqLGG~dkAtPK~ILelMnV~gLTr~hVkSHLQKYRl  301 (419)
                      .|..-++.+||...+-.++.+||+..- .++-.+|..     ...||++.|-+-||.|..
T Consensus        41 ~RTsAACGFRWNs~VRkqY~~~i~~AK-kqRk~~~~~-----~~~ltl~~vI~fLq~l~~   94 (161)
T TIGR02894        41 NRTAAACGFRWNAYVRKQYEEAIELAK-KQRKELKRE-----AGSLTLQDVISFLQNLKT   94 (161)
T ss_pred             cccHHHhcchHHHHHHHHHHHHHHHHH-HHHhccccC-----cccCCHHHHHHHHHHHHh
Confidence            455678999999999999999999765 222222221     367999999999999974


No 12 
>PF11888 DUF3408:  Protein of unknown function (DUF3408);  InterPro: IPR021823  This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 128 to 160 amino acids in length. 
Probab=39.67  E-value=35  Score=30.10  Aligned_cols=61  Identities=23%  Similarity=0.335  Sum_probs=42.7

Q ss_pred             ccchhcccccCcccCCCCCCCcccCHHHHHHHHHHHHHhCCCCCCChHHHHhhcCCCCccHHHHHHhhhhhhcc
Q 014753          229 GLMRSRFMSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTV  302 (419)
Q Consensus       229 g~~rs~~~~~~p~krs~kKpRlrWT~ELH~rFV~AVeqLGG~dkAtPK~ILelMnV~gLTr~hVkSHLQKYRl~  302 (419)
                      .-.|++|+...  +-..|++ +-=..|+|++....|..+|+.          -|.|.|+--.=++-||..|+.-
T Consensus        65 ~~Y~~~FL~~~--~~~~R~~-vyI~~e~h~~l~~Iv~~ig~~----------~~si~~yidNIL~~Hle~~~ee  125 (136)
T PF11888_consen   65 EDYRETFLKRP--KIKARKG-VYISRETHERLSRIVRVIGER----------KMSISGYIDNILRHHLEEYREE  125 (136)
T ss_pred             HHHHHHhCCCC--CCCCCee-eEECHHHHHHHHHHHHHHCCC----------CCcHHHHHHHHHHHHHHHHHHH
Confidence            45677887433  3334555 888999999999999999963          3455555445567899999753


No 13 
>PF07384 DUF1497:  Protein of unknown function (DUF1497);  InterPro: IPR009972 This entry is represented by Bacteriophage r1t, Orf17. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several phage and bacterial proteins of around 59 residues in length. Members of this family seem to be found exclusively in Lactococcus lactis and the bacteriophages that infect this organism. The function of this family is unknown.
Probab=36.90  E-value=30  Score=27.68  Aligned_cols=22  Identities=23%  Similarity=0.561  Sum_probs=19.3

Q ss_pred             cccCHHHHHHHHHHHHHhCCCC
Q 014753          250 MRWTTTLHARFVHAVELLGGHE  271 (419)
Q Consensus       250 lrWT~ELH~rFV~AVeqLGG~d  271 (419)
                      -.+..|+|..|-+-|+.|||.+
T Consensus        36 ~kfnqem~aefheri~klggk~   57 (59)
T PF07384_consen   36 NKFNQEMQAEFHERIKKLGGKN   57 (59)
T ss_pred             hHhhHHHHHHHHHHHHHhcccc
Confidence            4578999999999999999854


No 14 
>KOG3841 consensus TEF-1 and related transcription factor, TEAD family [Transcription]
Probab=26.28  E-value=38  Score=36.17  Aligned_cols=71  Identities=21%  Similarity=0.286  Sum_probs=43.2

Q ss_pred             ccchhcccccCcccCCCCCCCcccCHHHHHHHHHHHHHhCCCCCCChHHHHhh--------------cC---CCCccHHH
Q 014753          229 GLMRSRFMSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLEL--------------MD---VKDLTLAH  291 (419)
Q Consensus       229 g~~rs~~~~~~p~krs~kKpRlrWT~ELH~rFV~AVeqLGG~dkAtPK~ILel--------------Mn---V~gLTr~h  291 (419)
                      |.+.+.-.+++-.+  .+-.-=+|.++.-+.|.||+...-  .--+=|-||.-              ..   =+-=||.+
T Consensus        58 ~~~~p~~~~~~~D~--~~daegvWSpdIEqsFqEALaiyp--pcGrrKIilsdegkmyGRNELIarYIKlrtgktRTrKQ  133 (455)
T KOG3841|consen   58 DLKGPEAKDKFTDN--QRDAEGVWSPDIEQSFQEALAIYP--PCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQ  133 (455)
T ss_pred             ccCCccccccCCcc--ccccccccChhHHHHHHHHHhhcC--CCCceeEEEccCccccchHHHHHHHHHHhcCCchhHHH
Confidence            44444444444433  224456899999999999998763  11222333321              11   14578999


Q ss_pred             HHHhhhhhhccc
Q 014753          292 VKSHLQMYRTVK  303 (419)
Q Consensus       292 VkSHLQKYRl~k  303 (419)
                      |.||+|.....|
T Consensus       134 VSSHIQVlarrk  145 (455)
T KOG3841|consen  134 VSSHIQVLARRK  145 (455)
T ss_pred             HHHHHHHHHHHH
Confidence            999999775443


Done!