Query 014754
Match_columns 419
No_of_seqs 327 out of 2053
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 17:13:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014754.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014754hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2nyi_A Unknown protein; protei 99.8 6.6E-18 2.2E-22 154.2 15.7 156 19-180 4-164 (195)
2 2nyi_A Unknown protein; protei 99.7 3E-17 1E-21 149.8 13.6 167 107-331 4-174 (195)
3 1u8s_A Glycine cleavage system 99.7 8.7E-17 3E-21 146.2 14.6 156 20-180 6-167 (192)
4 1u8s_A Glycine cleavage system 99.6 6.5E-15 2.2E-19 133.8 17.8 166 107-330 5-176 (192)
5 3p96_A Phosphoserine phosphata 99.0 7.4E-09 2.5E-13 104.5 16.7 153 19-180 11-167 (415)
6 3p96_A Phosphoserine phosphata 98.8 2.2E-07 7.7E-12 93.6 19.0 137 247-393 10-150 (415)
7 2f06_A Conserved hypothetical 98.4 1.5E-05 5.3E-10 68.1 16.7 112 21-155 7-118 (144)
8 1zpv_A ACT domain protein; str 98.2 1.1E-05 3.8E-10 63.2 10.6 66 19-87 4-70 (91)
9 3l76_A Aspartokinase; alloster 98.2 0.00053 1.8E-08 72.2 26.0 277 19-373 269-562 (600)
10 1zpv_A ACT domain protein; str 98.1 2.2E-05 7.7E-10 61.4 10.9 67 107-179 4-70 (91)
11 2f06_A Conserved hypothetical 97.9 0.00041 1.4E-08 59.1 16.1 100 250-375 7-106 (144)
12 2ko1_A CTR148A, GTP pyrophosph 97.9 6.6E-05 2.3E-09 58.1 9.1 64 107-176 4-67 (88)
13 3obi_A Formyltetrahydrofolate 97.7 0.0002 6.8E-09 68.5 10.3 116 20-143 6-124 (288)
14 3o1l_A Formyltetrahydrofolate 97.7 0.00018 6.3E-09 69.2 10.1 67 18-86 20-89 (302)
15 2re1_A Aspartokinase, alpha an 97.6 0.0011 3.6E-08 58.1 13.3 109 247-373 23-138 (167)
16 3n0v_A Formyltetrahydrofolate 97.6 0.00093 3.2E-08 63.8 13.9 66 19-87 7-75 (286)
17 2re1_A Aspartokinase, alpha an 97.5 0.0014 4.8E-08 57.4 13.6 108 18-138 23-136 (167)
18 3obi_A Formyltetrahydrofolate 97.5 0.002 6.9E-08 61.5 15.6 111 248-368 5-116 (288)
19 3lou_A Formyltetrahydrofolate 97.5 0.00033 1.1E-08 67.1 10.1 66 19-86 9-79 (292)
20 3nrb_A Formyltetrahydrofolate 97.5 0.0003 1E-08 67.3 9.6 116 19-144 6-124 (287)
21 2ko1_A CTR148A, GTP pyrophosph 97.5 0.00027 9.3E-09 54.5 7.6 64 20-85 5-68 (88)
22 3o1l_A Formyltetrahydrofolate 97.5 0.00044 1.5E-08 66.5 10.4 68 107-178 21-89 (302)
23 3n0v_A Formyltetrahydrofolate 97.4 0.0018 6.2E-08 61.8 13.6 37 248-284 7-43 (286)
24 3lou_A Formyltetrahydrofolate 97.4 0.0032 1.1E-07 60.2 14.9 38 247-284 8-45 (292)
25 3nrb_A Formyltetrahydrofolate 97.3 0.001 3.6E-08 63.5 10.8 66 107-178 6-72 (287)
26 2dt9_A Aspartokinase; protein- 97.3 0.0018 6.1E-08 56.6 11.2 111 247-373 14-130 (167)
27 2f1f_A Acetolactate synthase i 97.3 0.00096 3.3E-08 58.3 9.2 66 108-179 3-69 (164)
28 2pc6_A Probable acetolactate s 97.1 0.0018 6E-08 56.7 8.8 66 108-179 4-70 (165)
29 2dtj_A Aspartokinase; protein- 97.1 0.0081 2.8E-07 53.1 13.2 137 18-180 13-157 (178)
30 2dtj_A Aspartokinase; protein- 97.1 0.0021 7.1E-08 56.9 9.2 110 247-373 13-130 (178)
31 3l76_A Aspartokinase; alloster 96.8 0.18 6.2E-06 52.9 22.7 191 18-281 353-562 (600)
32 2dt9_A Aspartokinase; protein- 96.7 0.0033 1.1E-07 54.9 7.0 105 17-138 13-128 (167)
33 2fgc_A Acetolactate synthase, 96.6 0.007 2.4E-07 54.0 8.7 66 108-179 29-95 (193)
34 3s1t_A Aspartokinase; ACT doma 96.6 0.22 7.4E-06 43.9 18.4 111 107-281 15-131 (181)
35 2f1f_A Acetolactate synthase i 96.5 0.011 3.8E-07 51.6 9.1 66 249-321 3-69 (164)
36 3s1t_A Aspartokinase; ACT doma 96.4 0.041 1.4E-06 48.7 12.4 111 248-373 15-131 (181)
37 2pc6_A Probable acetolactate s 96.2 0.013 4.5E-07 51.1 7.8 64 342-414 5-68 (165)
38 2jhe_A Transcription regulator 96.0 0.024 8.1E-07 49.2 8.7 34 251-284 2-35 (190)
39 4go7_X Aspartokinase; transfer 96.0 0.042 1.4E-06 49.4 10.3 113 247-373 33-150 (200)
40 2jhe_A Transcription regulator 95.8 0.036 1.2E-06 48.0 8.8 60 110-178 2-61 (190)
41 4go7_X Aspartokinase; transfer 95.7 0.028 9.6E-07 50.6 8.0 110 17-139 32-149 (200)
42 1y7p_A Hypothetical protein AF 95.7 0.017 5.8E-07 52.3 6.3 49 108-156 4-56 (223)
43 3ab4_A Aspartokinase; aspartat 95.5 0.54 1.8E-05 47.0 17.6 110 107-280 263-378 (421)
44 3ab4_A Aspartokinase; aspartat 95.4 0.18 6E-06 50.6 13.6 112 247-373 262-379 (421)
45 2fgc_A Acetolactate synthase, 95.4 0.074 2.5E-06 47.3 9.5 113 20-139 29-143 (193)
46 1y7p_A Hypothetical protein AF 94.8 0.068 2.3E-06 48.4 7.5 60 20-85 4-69 (223)
47 3c1m_A Probable aspartokinase; 94.5 0.18 6.2E-06 51.3 10.7 107 247-373 316-439 (473)
48 2qmx_A Prephenate dehydratase; 94.5 0.075 2.6E-06 50.4 7.3 66 343-414 202-267 (283)
49 3mwb_A Prephenate dehydratase; 94.2 0.1 3.4E-06 50.2 7.5 67 343-415 203-270 (313)
50 3luy_A Probable chorismate mut 94.1 0.11 3.6E-06 50.4 7.6 59 350-414 217-275 (329)
51 2qmw_A PDT, prephenate dehydra 94.0 0.11 3.9E-06 48.7 7.3 66 343-415 188-256 (267)
52 2qmx_A Prephenate dehydratase; 93.4 0.43 1.5E-05 45.2 10.3 55 248-303 199-253 (283)
53 3tvi_A Aspartokinase; structur 92.4 0.73 2.5E-05 46.4 11.0 110 247-375 296-411 (446)
54 3luy_A Probable chorismate mut 91.8 1.2 4.2E-05 42.9 11.3 53 250-303 207-261 (329)
55 1ygy_A PGDH, D-3-phosphoglycer 91.1 0.61 2.1E-05 48.0 9.0 62 342-414 455-516 (529)
56 3c1m_A Probable aspartokinase; 90.8 6.8 0.00023 39.6 16.3 114 107-278 317-436 (473)
57 3mwb_A Prephenate dehydratase; 90.8 0.64 2.2E-05 44.6 8.1 56 247-303 199-255 (313)
58 3tvi_A Aspartokinase; structur 90.7 1.3 4.3E-05 44.7 10.5 108 19-141 297-410 (446)
59 1sc6_A PGDH, D-3-phosphoglycer 90.4 0.76 2.6E-05 45.7 8.6 50 107-157 330-379 (404)
60 2qmw_A PDT, prephenate dehydra 89.7 1.1 3.9E-05 41.8 8.7 53 247-300 184-239 (267)
61 1ygy_A PGDH, D-3-phosphoglycer 89.3 1.4 4.9E-05 45.2 9.9 66 246-315 451-516 (529)
62 2cdq_A Aspartokinase; aspartat 88.0 1.2 4.2E-05 45.6 8.3 109 247-373 339-454 (510)
63 1sc6_A PGDH, D-3-phosphoglycer 87.3 1.7 5.9E-05 43.1 8.6 64 19-85 330-393 (404)
64 3mah_A Aspartokinase; aspartat 86.9 0.88 3E-05 38.8 5.5 99 248-373 17-121 (157)
65 1phz_A Protein (phenylalanine 86.4 0.73 2.5E-05 45.9 5.2 67 342-415 35-101 (429)
66 3mah_A Aspartokinase; aspartat 85.7 2.4 8.3E-05 35.9 7.7 99 19-140 17-121 (157)
67 3k5p_A D-3-phosphoglycerate de 85.4 2.7 9.1E-05 41.9 8.8 49 18-66 341-389 (416)
68 3k5p_A D-3-phosphoglycerate de 83.1 3.5 0.00012 41.0 8.6 49 106-155 341-389 (416)
69 3mtj_A Homoserine dehydrogenas 79.6 3.7 0.00013 41.2 7.4 67 340-413 358-424 (444)
70 2cdq_A Aspartokinase; aspartat 78.2 11 0.00037 38.5 10.5 110 107-281 340-454 (510)
71 1phz_A Protein (phenylalanine 73.5 4.6 0.00016 40.2 5.9 55 245-300 30-84 (429)
72 3mtj_A Homoserine dehydrogenas 72.4 6 0.0002 39.7 6.6 51 107-157 358-409 (444)
73 1zhv_A Hypothetical protein AT 44.0 72 0.0025 26.2 7.3 44 107-156 61-107 (134)
74 1rwu_A Hypothetical UPF0250 pr 40.3 76 0.0026 25.1 6.6 47 19-66 35-84 (109)
75 3rri_A Glyoxalase/bleomycin re 37.7 46 0.0016 25.9 5.1 45 354-400 80-124 (135)
76 1zvp_A Hypothetical protein VC 37.2 64 0.0022 26.5 5.9 45 106-156 69-116 (133)
77 2j0w_A Lysine-sensitive aspart 35.2 14 0.00049 36.9 1.9 107 247-373 306-419 (449)
78 1rwu_A Hypothetical UPF0250 pr 32.5 1.8E+02 0.0062 22.8 8.4 63 247-317 34-99 (109)
79 3zw5_A Glyoxalase domain-conta 29.7 57 0.002 26.1 4.5 44 354-400 100-143 (147)
80 3g12_A Putative lactoylglutath 26.2 1.5E+02 0.0052 22.9 6.4 51 247-305 65-116 (128)
81 3ey7_A Biphenyl-2,3-DIOL 1,2-d 25.8 77 0.0026 24.2 4.5 43 355-400 84-126 (133)
82 1zhv_A Hypothetical protein AT 24.9 51 0.0017 27.1 3.2 32 343-374 64-98 (134)
83 3huh_A Virulence protein STM31 22.1 88 0.003 24.9 4.3 43 355-400 97-139 (152)
84 2dnr_A Synaptojanin-1; RRM dom 21.1 1.8E+02 0.0061 22.2 5.4 27 32-59 27-53 (91)
No 1
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.77 E-value=6.6e-18 Score=154.18 Aligned_cols=156 Identities=17% Similarity=0.168 Sum_probs=108.5
Q ss_pred CcEEEEEEcCCCCChHHHHHHHHHhCCceEEEEEeee-cCcEEEEEEEEecCCCC-cccHHHHHHHHHhhCCCC-Cc-cc
Q 014754 19 EPHVITVNCPDKTGLGCDICRIILDFGLYITKGDIST-DGIWCYIVLWVVPHSSS-IIRWTNLKNRLMLECPSC-SV-SF 94 (419)
Q Consensus 19 ~~~~v~V~~~DrpgL~~~i~~~l~~~~lnI~~A~i~t-dG~~~~d~f~V~~~~g~-~~~~~~l~~~Le~~L~~~-~~-~~ 94 (419)
..++|+|+||||||||++|+++|+++|+||++|++++ .|.++| .|.|..+... ..+++.|++.|...+... .. ..
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m-~~~v~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 82 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAM-IVLVSLNAKDGKLIQSALESALPGFQISTRRASSV 82 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEE-EEEEEESSSSSHHHHHHHHHHSTTCEEEEEECCCC
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEE-EEEEEecCccchhHHHHHHHHHHHHHHhcCCeEEE
Confidence 4579999999999999999999999999999999986 666655 7777654321 012455544444332110 00 01
Q ss_pred ccccCCCCCCCCCeEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeecC-CeEEEEEEEEcCCCCCCCHHHHHHHHH
Q 014754 95 YFNQLSTRPTCSPVYLLKLFCLDRKGLLHDVTQVLCELELSIQRVKVTTTPD-GRVLDLFFITDNRELLHTKKRQDETCE 173 (419)
Q Consensus 95 ~~~~~~~~~~~~~~~~i~v~~~DrpGLl~~i~~~l~~~glnI~~a~i~T~~~-~~~~d~F~V~~~~g~~~~~~~~~~l~~ 173 (419)
.+ .. . ......++|+|.|+|||||+++|+++|+++|+||.+++++|... ++..+.|++....+.. ++.. +.|++
T Consensus 83 ~~-~~-~-~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~~~~~-~~~~-~~l~~ 157 (195)
T 2nyi_A 83 AE-RH-V-SPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSRVAFP-FPLY-QEVVT 157 (195)
T ss_dssp ------C-CTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEEEEEE-GGGH-HHHHH
T ss_pred Ee-CC-c-CCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEEEEcC-CCcc-HHHHH
Confidence 11 10 1 23346789999999999999999999999999999999997530 2345788887654322 2345 78888
Q ss_pred HHHHHHc
Q 014754 174 QLHAVLG 180 (419)
Q Consensus 174 ~L~~~l~ 180 (419)
.|..+..
T Consensus 158 ~l~~~a~ 164 (195)
T 2nyi_A 158 ALSRVEE 164 (195)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8887653
No 2
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.73 E-value=3e-17 Score=149.83 Aligned_cols=167 Identities=13% Similarity=0.132 Sum_probs=115.2
Q ss_pred CeEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeecCCeEEEEEEEEcCCCCCCCHHHHHHHHHHHHHHHccccccc
Q 014754 107 PVYLLKLFCLDRKGLLHDVTQVLCELELSIQRVKVTTTPDGRVLDLFFITDNRELLHTKKRQDETCEQLHAVLGESCISC 186 (419)
Q Consensus 107 ~~~~i~v~~~DrpGLl~~i~~~l~~~glnI~~a~i~T~~~~~~~d~F~V~~~~g~~~~~~~~~~l~~~L~~~l~~~~~~~ 186 (419)
..++|+|+|+|||||++.|+++|+++|+||.++++++..++.++ .|.|..+.. ..+.+++.|++.|..++.+..
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m-~~~v~~~~~--~~~~~~~~l~~~L~~~~~~~~--- 77 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAM-IVLVSLNAK--DGKLIQSALESALPGFQISTR--- 77 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEE-EEEEEESSS--SSHHHHHHHHHHSTTCEEEEE---
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEE-EEEEEecCc--cchhHHHHHHHHHHHHHHhcC---
Confidence 46899999999999999999999999999999999986555554 788865421 123345666666654432210
Q ss_pred ccccCCCccccCCCcCCCcHHHHHHhhhhccchhhhhhhccCCCccCCCccEEEEeCCCCCCeeEEEEEEcCcchHHHHH
Q 014754 187 ELQLAGPECDCHQGVTSLSPVVAEELFRFELSDKETRLQALSPDMTKLKKANVVVDNSLSPAHTLLQIHCVDHKGLLYDI 266 (419)
Q Consensus 187 ~~~l~~~~~~~~~~~~~~~rrl~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~V~v~n~~~~~~tvi~v~~~DrpGLL~~i 266 (419)
+ .. .+ + . .+ . ..+...++|+|.|+|||||+++|
T Consensus 78 ---~---~~-------~~------------------------~---~--~~----~-~~~~~~~iltv~g~DrpGiva~V 110 (195)
T 2nyi_A 78 ---R---AS-------SV------------------------A---E--RH----V-SPDTREYELYVEGPDSEGIVEAV 110 (195)
T ss_dssp ---E---CC-------CC-------------------------------------C-CTTEEEEEEEEEEECCTTHHHHH
T ss_pred ---C---eE-------EE------------------------E---e--CC----c-CCCCcEEEEEEEeCCCcCHHHHH
Confidence 0 00 00 0 0 01 1 34457799999999999999999
Q ss_pred HHHHHhCCeEEEEEEEeecCCC--CeeEEEEEEe-cCCCcCCCHHHHHHHHHHHHHHhcC-CceEEEec
Q 014754 267 MRTLKDCNMKISYGRFSPNSQG--YRDLDLFIQQ-KDGKKIVDPEKQSAICSRLKMEMLH-PLRVIIAN 331 (419)
Q Consensus 267 ~~~l~~~g~~I~~a~i~t~t~g--~~~~D~F~v~-~~g~~~~d~~~~~~l~~~L~~~l~~-~~~v~i~~ 331 (419)
+++|+++|+||.+++..+ .+ ++..+.|++. .-+.+ ++.. +.|++.|.....+ .+.+.+.+
T Consensus 111 t~~La~~g~nI~~~~~~t--~~~~~~~~~~F~m~~~~~~~--~~~~-~~l~~~l~~~a~~l~~di~~~~ 174 (195)
T 2nyi_A 111 TAVLAKKGANIVELETET--LPAPFAGFTLFRMGSRVAFP--FPLY-QEVVTALSRVEEEFGVDIDLEE 174 (195)
T ss_dssp HHHHHHTTCEEEEEEEEE--EECSSTTCEEEEEEEEEEEE--GGGH-HHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHcCCCEEEceeee--cccccCCCCeEEEEEEEEcC--CCcc-HHHHHHHHHHHHHcCeEEEEEE
Confidence 999999999999999995 45 5677889772 22222 2334 7888887655443 35555543
No 3
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.71 E-value=8.7e-17 Score=146.24 Aligned_cols=156 Identities=15% Similarity=0.164 Sum_probs=111.8
Q ss_pred cEEEEEEcCCCCChHHHHHHHHHhCCceEEEEEeee-cCcEEEEEEEEecCCCCcccHHHHHHHHHhhCCCC-Cc-cccc
Q 014754 20 PHVITVNCPDKTGLGCDICRIILDFGLYITKGDIST-DGIWCYIVLWVVPHSSSIIRWTNLKNRLMLECPSC-SV-SFYF 96 (419)
Q Consensus 20 ~~~v~V~~~DrpgL~~~i~~~l~~~~lnI~~A~i~t-dG~~~~d~f~V~~~~g~~~~~~~l~~~Le~~L~~~-~~-~~~~ 96 (419)
.+.|+|+|+||||+|++++++|+++|+||+++++++ .|.++ ..|.|..+. ..++.|++.|+..+... .. ...+
T Consensus 6 ~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~-~~~~v~~~~---~~~~~l~~~L~~~~~~~~~~~~~~~ 81 (192)
T 1u8s_A 6 HLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFT-LLMLISGSP---SNITRVETTLPLLGQQHDLITMMKR 81 (192)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEE-EEEEEEECH---HHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred EEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceE-EEEEEecCC---CCHHHHHHHHHHHHHhcCCEEEEEe
Confidence 478999999999999999999999999999999986 66654 477776543 26778888887655211 11 1111
Q ss_pred ccCCCCCCCCCeEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeecC---CeEEEEEEEEcCCCCCCCHHHHHHHHH
Q 014754 97 NQLSTRPTCSPVYLLKLFCLDRKGLLHDVTQVLCELELSIQRVKVTTTPD---GRVLDLFFITDNRELLHTKKRQDETCE 173 (419)
Q Consensus 97 ~~~~~~~~~~~~~~i~v~~~DrpGLl~~i~~~l~~~glnI~~a~i~T~~~---~~~~d~F~V~~~~g~~~~~~~~~~l~~ 173 (419)
........+...++|+|.++||||++++|+++|+++|+||.+++.+|... .+..+.|++....+. +++...+.|++
T Consensus 82 ~~~~~~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~~~~-~~~~~~~~l~~ 160 (192)
T 1u8s_A 82 TSPHDHQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARV-DSGCNLMQLQE 160 (192)
T ss_dssp ECCCCCCCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEE-CTTSCHHHHHH
T ss_pred CCCCCCccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEEEeC-CCCCCHHHHHH
Confidence 11111233446889999999999999999999999999999999997531 246688888765432 12335678888
Q ss_pred HHHHHHc
Q 014754 174 QLHAVLG 180 (419)
Q Consensus 174 ~L~~~l~ 180 (419)
.|..+..
T Consensus 161 ~l~~~~~ 167 (192)
T 1u8s_A 161 EFDALCT 167 (192)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8887653
No 4
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.64 E-value=6.5e-15 Score=133.80 Aligned_cols=166 Identities=9% Similarity=0.067 Sum_probs=113.8
Q ss_pred CeEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeecCCeEEEEEEEEcCCCCCCCHHHHHHHHHHHHHHHccccccc
Q 014754 107 PVYLLKLFCLDRKGLLHDVTQVLCELELSIQRVKVTTTPDGRVLDLFFITDNRELLHTKKRQDETCEQLHAVLGESCISC 186 (419)
Q Consensus 107 ~~~~i~v~~~DrpGLl~~i~~~l~~~glnI~~a~i~T~~~~~~~d~F~V~~~~g~~~~~~~~~~l~~~L~~~l~~~~~~~ 186 (419)
..++|+|+|+||||++++|+++|+++|+||.++++++. .+...-.|.|..+ ...++.|++.|..++....
T Consensus 5 ~~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~-~~~f~~~~~v~~~------~~~~~~l~~~L~~~~~~~~--- 74 (192)
T 1u8s_A 5 QHLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMF-GKEFTLLMLISGS------PSNITRVETTLPLLGQQHD--- 74 (192)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEE-TTEEEEEEEEEEC------HHHHHHHHHHHHHHHHHHT---
T ss_pred cEEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeec-CCceEEEEEEecC------CCCHHHHHHHHHHHHHhcC---
Confidence 36789999999999999999999999999999999985 4566568888643 2467788888887663210
Q ss_pred ccccCCCccccCCCcCCCcHHHHHHhhhhccchhhhhhhccCCCccCCCccEEEEeCCCCCCeeEEEEEEcCcchHHHHH
Q 014754 187 ELQLAGPECDCHQGVTSLSPVVAEELFRFELSDKETRLQALSPDMTKLKKANVVVDNSLSPAHTLLQIHCVDHKGLLYDI 266 (419)
Q Consensus 187 ~~~l~~~~~~~~~~~~~~~rrl~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~V~v~n~~~~~~tvi~v~~~DrpGLL~~i 266 (419)
+ .. .+. ..++ ++ +..+...++|+|.|+||||++++|
T Consensus 75 ---~---~~-------~~~--------------------~~~~------~~-----~~~~~~~~~l~v~~~D~~Gil~~v 110 (192)
T 1u8s_A 75 ---L---IT-------MMK--------------------RTSP------HD-----HQTHAYTVEVYVESDDKLGLTEKF 110 (192)
T ss_dssp ---C---EE-------EEE--------------------EECC------CC-----CCCCSEEEEEEEEESCCTTHHHHH
T ss_pred ---C---EE-------EEE--------------------eCCC------CC-----CccCCceEEEEEEeCCCccHHHHH
Confidence 0 00 000 0000 11 244557899999999999999999
Q ss_pred HHHHHhCCeEEEEEEEeecCCC----CeeEEEEEEe-cCCCcCCCHHHHHHHHHHHHHHhcC-CceEEEe
Q 014754 267 MRTLKDCNMKISYGRFSPNSQG----YRDLDLFIQQ-KDGKKIVDPEKQSAICSRLKMEMLH-PLRVIIA 330 (419)
Q Consensus 267 ~~~l~~~g~~I~~a~i~t~t~g----~~~~D~F~v~-~~g~~~~d~~~~~~l~~~L~~~l~~-~~~v~i~ 330 (419)
+++|+++|+||.+++..+ .+ .+..+.|++. .-+.+ ++...+.|++.|.+...+ .+.+.+.
T Consensus 111 ~~~l~~~~~nI~~~~~~t--~~~~~~~~~~~~F~~~~~~~~~--~~~~~~~l~~~l~~~~~~~~~~~~~~ 176 (192)
T 1u8s_A 111 TQFFAQRQIGMASLSAQT--ISKDKLHSEQNQFHIAISARVD--SGCNLMQLQEEFDALCTALDVQGSLN 176 (192)
T ss_dssp HHHHHHTTCCEEEEEEEE--EC--------CEEEEEEEEEEC--TTSCHHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHcCCcHHHhhhhc--ccCCccCCCCCEEEEEEEEeCC--CCCCHHHHHHHHHHHHHHhCceEEEE
Confidence 999999999999999985 45 2567888662 21111 122467788887654443 3444443
No 5
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=99.00 E-value=7.4e-09 Score=104.52 Aligned_cols=153 Identities=9% Similarity=0.022 Sum_probs=100.4
Q ss_pred CcEEEEEEcCCCCChHHHHHHHHHhCCceEEEEEeee-cCcEEEEEEEEecCCCCcccHHHHHHHHHhhCCCC-Cc-ccc
Q 014754 19 EPHVITVNCPDKTGLGCDICRIILDFGLYITKGDIST-DGIWCYIVLWVVPHSSSIIRWTNLKNRLMLECPSC-SV-SFY 95 (419)
Q Consensus 19 ~~~~v~V~~~DrpgL~~~i~~~l~~~~lnI~~A~i~t-dG~~~~d~f~V~~~~g~~~~~~~l~~~Le~~L~~~-~~-~~~ 95 (419)
..+.|+|.|||||||++.++++|+++|+||++++-+. .|.+ .-...+.-+.. ....+.|++.|+...... .. .+.
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~f-~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~~~~ 88 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRL-TLGVLVCCPAD-VADGPALRHDVEAAIRKVGLDVSIE 88 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTEE-EEEEEEEECHH-HHTSHHHHHHHHHHHHHTTCEEEEE
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCEe-EEEEEEEecCC-cCCHHHHHHHHHHHHHHcCeEEEEE
Confidence 4578999999999999999999999999999999886 5554 34444432221 113466777776542111 11 111
Q ss_pred cccCCCCCCCCCeEEEEEEecC-cccHHHHHHHHHHhCCceEEEEEEEeecCCeEEEEEEEEcCCCCCCCHHHHHHHHHH
Q 014754 96 FNQLSTRPTCSPVYLLKLFCLD-RKGLLHDVTQVLCELELSIQRVKVTTTPDGRVLDLFFITDNRELLHTKKRQDETCEQ 174 (419)
Q Consensus 96 ~~~~~~~~~~~~~~~i~v~~~D-rpGLl~~i~~~l~~~glnI~~a~i~T~~~~~~~d~F~V~~~~g~~~~~~~~~~l~~~ 174 (419)
+...........++.+++++.| ++|++.+++.+|+.+|+||...+..+. .....--|++..+. ...+.+++.
T Consensus 89 ~~~~~~~~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~-~~~~~~~~~v~~~~------~~~~~l~~~ 161 (415)
T 3p96_A 89 RSDDVPIIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSD-YPVIGLELRVSVPP------GADEALRTA 161 (415)
T ss_dssp ECSSSCSSCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEES-SSSEEEEEEEECCT------TCHHHHHHH
T ss_pred ECCcccccCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccC-CCceEEEEEeeCCC------CCHHHHHHH
Confidence 1111111234568899999999 999999999999999999998888753 22222235564321 224556666
Q ss_pred HHHHHc
Q 014754 175 LHAVLG 180 (419)
Q Consensus 175 L~~~l~ 180 (419)
|.+.+.
T Consensus 162 l~~l~~ 167 (415)
T 3p96_A 162 LNRVSS 167 (415)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 666543
No 6
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.79 E-value=2.2e-07 Score=93.59 Aligned_cols=137 Identities=11% Similarity=0.018 Sum_probs=92.3
Q ss_pred CCeeEEEEEEcCcchHHHHHHHHHHhCCeEEEEEEEeecCCCCeeEEEEEEecCCCcCCCHHHHHHHHHHHHHHhc-CCc
Q 014754 247 PAHTLLQIHCVDHKGLLYDIMRTLKDCNMKISYGRFSPNSQGYRDLDLFIQQKDGKKIVDPEKQSAICSRLKMEML-HPL 325 (419)
Q Consensus 247 ~~~tvi~v~~~DrpGLL~~i~~~l~~~g~~I~~a~i~t~t~g~~~~D~F~v~~~g~~~~d~~~~~~l~~~L~~~l~-~~~ 325 (419)
...++|+|.|+|||||++.|+..|+++|+||.++.-.. .++++.-...++..... ...+.|++.|...-. -.+
T Consensus 10 ~~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~--~~~~f~~~~~~~~~~~~----~~~~~l~~~l~~~~~~~~~ 83 (415)
T 3p96_A 10 KVSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVV--IRHRLTLGVLVCCPADV----ADGPALRHDVEAAIRKVGL 83 (415)
T ss_dssp CEEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEE--ETTEEEEEEEEEECHHH----HTSHHHHHHHHHHHHHTTC
T ss_pred CCeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEE--ECCEeEEEEEEEecCCc----CCHHHHHHHHHHHHHHcCe
Confidence 35689999999999999999999999999999999875 34433211112221110 123677777754322 234
Q ss_pred eEEEecCCCC--cccccceeEEEeeCC-CCccHHHHHHHHHHcCceEEEEEeeeeeccCceeeEEEEEEEc
Q 014754 326 RVIIANRGPD--TELLVANPVELCGKG-RPRVFYDVTLALKVLGICVFSAAIGRYSTSEREWEIYRFLLDE 393 (419)
Q Consensus 326 ~v~i~~~~~~--~~~~~~~~~~v~g~D-RpGil~~vt~~l~~~~v~I~~~~~~t~~~~~~~~~~~~f~~~d 393 (419)
.+.+...... ......+.+.+.|.+ +||++.+|+.+|+++|+||..+...+ .+.. ....|++.-
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~--~~~~--~~~~~~v~~ 150 (415)
T 3p96_A 84 DVSIERSDDVPIIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVS--DYPV--IGLELRVSV 150 (415)
T ss_dssp EEEEEECSSSCSSCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEE--SSSS--EEEEEEEEC
T ss_pred EEEEEECCcccccCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeecc--CCCc--eEEEEEeeC
Confidence 5555442221 112335689999999 99999999999999999999888765 2333 445566643
No 7
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.39 E-value=1.5e-05 Score=68.12 Aligned_cols=112 Identities=11% Similarity=0.057 Sum_probs=77.3
Q ss_pred EEEEEEcCCCCChHHHHHHHHHhCCceEEEEEeeecCcEEEEEEEEecCCCCcccHHHHHHHHHhhCCCCCcccccccCC
Q 014754 21 HVITVNCPDKTGLGCDICRIILDFGLYITKGDISTDGIWCYIVLWVVPHSSSIIRWTNLKNRLMLECPSCSVSFYFNQLS 100 (419)
Q Consensus 21 ~~v~V~~~DrpgL~~~i~~~l~~~~lnI~~A~i~tdG~~~~d~f~V~~~~g~~~~~~~l~~~Le~~L~~~~~~~~~~~~~ 100 (419)
..++|..+|+||.++++++.|+++|+||..-.........+-.|.+ + +.+..++.|++. +..
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~~~~~~~---~----d~~~a~~~L~~~--G~~--------- 68 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFGILRGIV---S----DPDKAYKALKDN--HFA--------- 68 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEE---S----CHHHHHHHHHHT--TCC---------
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCCEEEEEe---C----CHHHHHHHHHHc--CCe---------
Confidence 5788999999999999999999999999987655321111123443 1 345555666653 211
Q ss_pred CCCCCCCeEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeecCCeEEEEEEE
Q 014754 101 TRPTCSPVYLLKLFCLDRKGLLHDVTQVLCELELSIQRVKVTTTPDGRVLDLFFI 155 (419)
Q Consensus 101 ~~~~~~~~~~i~v~~~DrpGLl~~i~~~l~~~glnI~~a~i~T~~~~~~~d~F~V 155 (419)
.....++.+..+|+||.+++++++|++.|+||.....+. .++...-+|-+
T Consensus 69 ----v~~~svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~-~~~~~~~~i~~ 118 (144)
T 2f06_A 69 ----VNITDVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSFA-NNNVANVVIRP 118 (144)
T ss_dssp ----EEEEEEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEE-ETTEEEEEEEE
T ss_pred ----EeeeeEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEc-cCCcEEEEEEe
Confidence 011246777889999999999999999999998766652 35555555533
No 8
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.21 E-value=1.1e-05 Score=63.20 Aligned_cols=66 Identities=23% Similarity=0.257 Sum_probs=51.4
Q ss_pred CcEEEEEEcCCCCChHHHHHHHHHhCCceEEEEEeee-cCcEEEEEEEEecCCCCcccHHHHHHHHHhhC
Q 014754 19 EPHVITVNCPDKTGLGCDICRIILDFGLYITKGDIST-DGIWCYIVLWVVPHSSSIIRWTNLKNRLMLEC 87 (419)
Q Consensus 19 ~~~~v~V~~~DrpgL~~~i~~~l~~~~lnI~~A~i~t-dG~~~~d~f~V~~~~g~~~~~~~l~~~Le~~L 87 (419)
....|+|.++||||++++++++|+++|+||.+....+ +|. +.-.+.+.-++.. ..+.+.+.|++..
T Consensus 4 ~~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~-~~~~i~v~~~~~~--~l~~l~~~L~~~~ 70 (91)
T 1zpv_A 4 MKAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEY-FTMMAVVSSDEKQ--DFTYLRNEFEAFG 70 (91)
T ss_dssp EEEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTE-EEEEEEEEESSCC--CHHHHHHHHHHHH
T ss_pred ceEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCE-EEEEEEEEeCCCC--CHHHHHHHHHHHH
Confidence 3478999999999999999999999999999999886 555 4556666444322 5777878887653
No 9
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=98.18 E-value=0.00053 Score=72.22 Aligned_cols=277 Identities=16% Similarity=0.162 Sum_probs=157.5
Q ss_pred CcEEEEEEc-CCCCChHHHHHHHHHhCCceEEEEEe--eecCcEEEEEEEEecCCCCcccHHHHHHHHHhhCCCCCcccc
Q 014754 19 EPHVITVNC-PDKTGLGCDICRIILDFGLYITKGDI--STDGIWCYIVLWVVPHSSSIIRWTNLKNRLMLECPSCSVSFY 95 (419)
Q Consensus 19 ~~~~v~V~~-~DrpgL~~~i~~~l~~~~lnI~~A~i--~tdG~~~~d~f~V~~~~g~~~~~~~l~~~Le~~L~~~~~~~~ 95 (419)
+.+.|++.. ++.||..++|...|+++|+||---.- +.+|.. -..|.|...+- ....++.+.+...+.....
T Consensus 269 ~~~~i~i~~~~~~~g~~~~if~~La~~~I~Vd~I~qs~~~~~~~-~Isftv~~~~~--~~a~~~l~~~~~el~~~~~--- 342 (600)
T 3l76_A 269 DQAKVALLRVPDRPGVASKLFRDIAQQQVDIDLIIQSIHDGNSN-DIAFTVVKDLL--NTAEAVTSAIAPALRSYPE--- 342 (600)
T ss_dssp CCEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEEBCCCBTTEE-EEEEEECGGGH--HHHHHHHHHHGGGGSSSTT---
T ss_pred CEEEEEEeCCCCcccHHHHHHHHHHHcCCCEEEEEeeccCCCCc-eEEEEEeHHHH--HHHHHHHHHHHHHhhcccc---
Confidence 345555554 89999999999999999999843221 124543 34666633221 1222222333333311000
Q ss_pred cccCCCCCCCCCeEEEEEEec---CcccHHHHHHHHHHhCCceEEEEEEEeecCCeEEEEEEEEcCCCCCCCHHHHHHHH
Q 014754 96 FNQLSTRPTCSPVYLLKLFCL---DRKGLLHDVTQVLCELELSIQRVKVTTTPDGRVLDLFFITDNRELLHTKKRQDETC 172 (419)
Q Consensus 96 ~~~~~~~~~~~~~~~i~v~~~---DrpGLl~~i~~~l~~~glnI~~a~i~T~~~~~~~d~F~V~~~~g~~~~~~~~~~l~ 172 (419)
...........+...|.|++. .+||+.+++..+|++.|+||.... |+ +. --.|.|.. +..++.-
T Consensus 343 ~~~~~~v~~~~~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~~is--tS--e~-~Is~vI~~--------~d~~~Av 409 (600)
T 3l76_A 343 ADQEAEIIVEKGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMIS--TS--EV-KVSCVIDQ--------RDADRAI 409 (600)
T ss_dssp CSSSSEEEEECSEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCCEEE--EC--SS-EEEEEEEG--------GGHHHHH
T ss_pred ccCcceeEecCCeEEEEEECCCcccCccHHHHHHHHHHhCCCcEEEEe--cC--CC-EEEEEEcH--------HHHHHHH
Confidence 000000012346888999986 689999999999999999998443 43 22 23344432 2334555
Q ss_pred HHHHHHHcccccccccccCCCccccCCCcCCCcHHHHHHhhhhccchhhhhhhccCCCccCCCccEEEEeCCCCCCeeEE
Q 014754 173 EQLHAVLGESCISCELQLAGPECDCHQGVTSLSPVVAEELFRFELSDKETRLQALSPDMTKLKKANVVVDNSLSPAHTLL 252 (419)
Q Consensus 173 ~~L~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~rrl~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~V~v~n~~~~~~tvi 252 (419)
+.|.+.+..... +. .++. . + .....-+-|..+. +.+.|
T Consensus 410 ~aLh~~f~~~~t--------~~---------~~~~--------~-----------~--~~~~~v~Gia~~~----~~a~i 447 (600)
T 3l76_A 410 AALSNAFGVTLS--------PP---------KNQT--------D-----------T--SHLPAVRGVALDQ----DQAQI 447 (600)
T ss_dssp HHHHHHTTCCBC--------CC---------CCCC--------C----------------CCSCCEEEEEC----SEEEE
T ss_pred HHHHHhhcccCC--------Cc---------cccc--------c-----------c--cccCceEEEEeeC----CEEEE
Confidence 566666643210 00 0000 0 0 0001124555543 45667
Q ss_pred EEEE-cCcchHHHHHHHHHHhCCeEEEEEEEeecCC---CCeeEE-EEEEecCCCcCCCHHHHHHHHHHHHHHhcCC---
Q 014754 253 QIHC-VDHKGLLYDIMRTLKDCNMKISYGRFSPNSQ---GYRDLD-LFIQQKDGKKIVDPEKQSAICSRLKMEMLHP--- 324 (419)
Q Consensus 253 ~v~~-~DrpGLL~~i~~~l~~~g~~I~~a~i~t~t~---g~~~~D-~F~v~~~g~~~~d~~~~~~l~~~L~~~l~~~--- 324 (419)
++.. +|+||+.++|...|++.|+||.--.-+.... |....| .|.+.. +.+++..+.|.+ +...
T Consensus 448 ~i~~~~~~~g~~~~if~~La~~~I~vDmI~q~~~~~~~~g~~~~~isftv~~--------~d~~~a~~~l~~-~~~~~~~ 518 (600)
T 3l76_A 448 AIRHVPDRPGMAAQLFTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVAE--------GDSSQAEAILQP-LIKDWLD 518 (600)
T ss_dssp EEEEEESSTTHHHHHHHHHHHTTCCCCEEEEEEECCCSSSSCEEEEEEEEEH--------HHHHHHHHHHHH-HTTTSTT
T ss_pred EEecCCCCccHHHHHHHHHHHcCCcEEEEEecccccccCCCccceEEEEEeH--------HHHHHHHHHHHH-HHHhcCC
Confidence 6654 8999999999999999999995333221011 321223 466632 233444444433 2221
Q ss_pred ceEEEecCCCCcccccceeEEEee---CCCCccHHHHHHHHHHcCceEEEEE
Q 014754 325 LRVIIANRGPDTELLVANPVELCG---KGRPRVFYDVTLALKVLGICVFSAA 373 (419)
Q Consensus 325 ~~v~i~~~~~~~~~~~~~~~~v~g---~DRpGil~~vt~~l~~~~v~I~~~~ 373 (419)
..+.+... -..+.++| ..+||+-..+.++|++.||||....
T Consensus 519 ~~v~~~~~--------~akVSiVG~GM~~~~Gvaa~~f~aL~~~~Ini~mis 562 (600)
T 3l76_A 519 AAIVVNKA--------IAKVSIVGSGMIGHPGVAAHFFAALAQENINIEMIA 562 (600)
T ss_dssp CEEEEECC--------EEEEEEECGGGTTCTTHHHHHHHHHHTTTCCCCEEE
T ss_pred ceEEEeCC--------eEEEEEECcccccCccHHHHHHHHHHHCCCceEEEE
Confidence 12332211 23889998 4899999999999999999998877
No 10
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.13 E-value=2.2e-05 Score=61.43 Aligned_cols=67 Identities=16% Similarity=0.225 Sum_probs=52.3
Q ss_pred CeEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeecCCeEEEEEEEEcCCCCCCCHHHHHHHHHHHHHHH
Q 014754 107 PVYLLKLFCLDRKGLLHDVTQVLCELELSIQRVKVTTTPDGRVLDLFFITDNRELLHTKKRQDETCEQLHAVL 179 (419)
Q Consensus 107 ~~~~i~v~~~DrpGLl~~i~~~l~~~glnI~~a~i~T~~~~~~~d~F~V~~~~g~~~~~~~~~~l~~~L~~~l 179 (419)
..+.|+|.++||||++++|+++|+++|+||.+....+. ++.+.-.+.+.-++ ...++.|.+.|.++-
T Consensus 4 ~~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~-~~~~~~~i~v~~~~-----~~~l~~l~~~L~~~~ 70 (91)
T 1zpv_A 4 MKAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVL-DEYFTMMAVVSSDE-----KQDFTYLRNEFEAFG 70 (91)
T ss_dssp EEEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEE-TTEEEEEEEEEESS-----CCCHHHHHHHHHHHH
T ss_pred ceEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEE-cCEEEEEEEEEeCC-----CCCHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999865 46666666664322 224667888887754
No 11
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=97.94 E-value=0.00041 Score=59.06 Aligned_cols=100 Identities=18% Similarity=0.121 Sum_probs=66.3
Q ss_pred eEEEEEEcCcchHHHHHHHHHHhCCeEEEEEEEeecCCCCeeEEEEEEecCCCcCCCHHHHHHHHHHHHHHhcCCceEEE
Q 014754 250 TLLQIHCVDHKGLLYDIMRTLKDCNMKISYGRFSPNSQGYRDLDLFIQQKDGKKIVDPEKQSAICSRLKMEMLHPLRVII 329 (419)
Q Consensus 250 tvi~v~~~DrpGLL~~i~~~l~~~g~~I~~a~i~t~t~g~~~~D~F~v~~~g~~~~d~~~~~~l~~~L~~~l~~~~~v~i 329 (419)
..++|.-+|+||.|++++..|++.|+||..-.+.. +. +. .++-+.. .++ +..++.|.. . +..+..
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~-~~-~~--~~~~~~~-----~d~---~~a~~~L~~-~--G~~v~~ 71 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIAE-NA-DF--GILRGIV-----SDP---DKAYKALKD-N--HFAVNI 71 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEE-CS-SC--EEEEEEE-----SCH---HHHHHHHHH-T--TCCEEE
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEe-cC-CC--CEEEEEe-----CCH---HHHHHHHHH-c--CCeEee
Confidence 46788889999999999999999999999877753 12 21 1121111 233 333333432 1 111110
Q ss_pred ecCCCCcccccceeEEEeeCCCCccHHHHHHHHHHcCceEEEEEee
Q 014754 330 ANRGPDTELLVANPVELCGKGRPRVFYDVTLALKVLGICVFSAAIG 375 (419)
Q Consensus 330 ~~~~~~~~~~~~~~~~v~g~DRpGil~~vt~~l~~~~v~I~~~~~~ 375 (419)
...+-+.-.|+||.+++++++|++.|+||..+-+.
T Consensus 72 -----------~svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~ 106 (144)
T 2f06_A 72 -----------TDVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSF 106 (144)
T ss_dssp -----------EEEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -----------eeEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEE
Confidence 11344556799999999999999999999877654
No 12
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.88 E-value=6.6e-05 Score=58.06 Aligned_cols=64 Identities=14% Similarity=0.278 Sum_probs=46.9
Q ss_pred CeEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeecCCeEEEEEEEEcCCCCCCCHHHHHHHHHHHH
Q 014754 107 PVYLLKLFCLDRKGLLHDVTQVLCELELSIQRVKVTTTPDGRVLDLFFITDNRELLHTKKRQDETCEQLH 176 (419)
Q Consensus 107 ~~~~i~v~~~DrpGLl~~i~~~l~~~glnI~~a~i~T~~~~~~~d~F~V~~~~g~~~~~~~~~~l~~~L~ 176 (419)
..+.|.|.++||||+|++|+++|++.|+||.+..+.+. ++.+...|.+... +...++++.+.|.
T Consensus 4 ~~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~-~~~~~~~i~v~~~-----~~~~l~~l~~~L~ 67 (88)
T 2ko1_A 4 FLAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAK-DGIFTCNLMIFVK-----NTDKLTTLMDKLR 67 (88)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEEC-SSEEEEEEEEEES-----SHHHHHHHHHHHT
T ss_pred EEEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEc-CCEEEEEEEEEEC-----CHHHHHHHHHHHh
Confidence 46789999999999999999999999999999999764 4455555555432 2344444444443
No 13
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.65 E-value=0.0002 Score=68.53 Aligned_cols=116 Identities=13% Similarity=0.215 Sum_probs=71.4
Q ss_pred cEEEEEEcCCCCChHHHHHHHHHhCCceEEEEEeee---cCcEEEEEEEEecCCCCcccHHHHHHHHHhhCCCCCccccc
Q 014754 20 PHVITVNCPDKTGLGCDICRIILDFGLYITKGDIST---DGIWCYIVLWVVPHSSSIIRWTNLKNRLMLECPSCSVSFYF 96 (419)
Q Consensus 20 ~~~v~V~~~DrpgL~~~i~~~l~~~~lnI~~A~i~t---dG~~~~d~f~V~~~~g~~~~~~~l~~~Le~~L~~~~~~~~~ 96 (419)
...++|.|+|||||++++++.|+++|+||.+++.++ .|.++ -...+.-+++ ....+.|++.|+....... +..
T Consensus 6 ~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ff-mr~~~~~~~~-~~~~~~L~~~f~~la~~~~--m~~ 81 (288)
T 3obi_A 6 QYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFF-MRVVFNAAAK-VIPLASLRTGFGVIAAKFT--MGW 81 (288)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEE-EEEEEEESSC-CCCHHHHHHHHHHHHHHTT--CEE
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceE-EEEEEEcCCC-CCCHHHHHHHHHHHHHHcC--CEE
Confidence 468999999999999999999999999999999874 66654 3344433332 2367888888876432111 100
Q ss_pred ccCCCCCCCCCeEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEe
Q 014754 97 NQLSTRPTCSPVYLLKLFCLDRKGLLHDVTQVLCELELSIQRVKVTT 143 (419)
Q Consensus 97 ~~~~~~~~~~~~~~i~v~~~DrpGLl~~i~~~l~~~glnI~~a~i~T 143 (419)
... . ......|-|..--+---|..+......-.+++.-+-+.+
T Consensus 82 ~l~---~-~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Vis 124 (288)
T 3obi_A 82 HMR---D-RETRRKVMLLVSQSDHCLADILYRWRVGDLHMIPTAIVS 124 (288)
T ss_dssp EEE---E-TTSCEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEE
T ss_pred Eee---c-cCCCcEEEEEEcCCCCCHHHHHHHHHCCCCCeEEEEEEc
Confidence 000 0 011233444444444457777777766666655445554
No 14
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.65 E-value=0.00018 Score=69.17 Aligned_cols=67 Identities=10% Similarity=0.257 Sum_probs=50.6
Q ss_pred CCcEEEEEEcCCCCChHHHHHHHHHhCCceEEEEEeee---cCcEEEEEEEEecCCCCcccHHHHHHHHHhh
Q 014754 18 GEPHVITVNCPDKTGLGCDICRIILDFGLYITKGDIST---DGIWCYIVLWVVPHSSSIIRWTNLKNRLMLE 86 (419)
Q Consensus 18 ~~~~~v~V~~~DrpgL~~~i~~~l~~~~lnI~~A~i~t---dG~~~~d~f~V~~~~g~~~~~~~l~~~Le~~ 86 (419)
.....++|.|||||||++++++.|+++|+||++++.+. .|.+| -...+..+.+ ....+.|++.|+..
T Consensus 20 ~~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~Ff-Mr~~~~~~~~-~~~~~~L~~~l~~l 89 (302)
T 3o1l_A 20 MRTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFF-MRHEIRADTL-PFDLDGFREAFTPI 89 (302)
T ss_dssp CCEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEE-EEEEEEGGGS-SSCHHHHHHHHHHH
T ss_pred cceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEE-EEEEEecCCC-CCCHHHHHHHHHHH
Confidence 34578999999999999999999999999999999886 46654 3444433321 13677888777654
No 15
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.58 E-value=0.0011 Score=58.14 Aligned_cols=109 Identities=14% Similarity=0.102 Sum_probs=71.7
Q ss_pred CCeeEEEEEE-cCcchHHHHHHHHHHhCCeEEEEEEEeecCCCCeeEEEEEEecCCCcCCCHHHHHHHHHHHHHHhcCCc
Q 014754 247 PAHTLLQIHC-VDHKGLLYDIMRTLKDCNMKISYGRFSPNSQGYRDLDLFIQQKDGKKIVDPEKQSAICSRLKMEMLHPL 325 (419)
Q Consensus 247 ~~~tvi~v~~-~DrpGLL~~i~~~l~~~g~~I~~a~i~t~t~g~~~~D~F~v~~~g~~~~d~~~~~~l~~~L~~~l~~~~ 325 (419)
.+.+.|+|.+ .|+||.++++..+|+++|+||..-..+. +.++...=.|+++. +..++..+.|.+ +...+
T Consensus 23 ~~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~-~~~g~~~isf~v~~--------~~~~~a~~~l~~-~~~~l 92 (167)
T 2re1_A 23 KNQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNV-GSEGTTDFSFTVPR--------GDYKQTLEILSE-RQDSI 92 (167)
T ss_dssp CCCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC-----CEEEEEEEECG--------GGHHHHHHHHHH-SSTTT
T ss_pred CCEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCC-CCCCeeEEEEEEec--------hHHHHHHHHHHH-HHHHc
Confidence 3567888885 9999999999999999999998766542 11222222367643 112333334433 22222
Q ss_pred e---EEEecCCCCcccccceeEEEeeCC---CCccHHHHHHHHHHcCceEEEEE
Q 014754 326 R---VIIANRGPDTELLVANPVELCGKG---RPRVFYDVTLALKVLGICVFSAA 373 (419)
Q Consensus 326 ~---v~i~~~~~~~~~~~~~~~~v~g~D---RpGil~~vt~~l~~~~v~I~~~~ 373 (419)
. +.+. . .-..+.+.|.+ +||++..+..+|++.|+||....
T Consensus 93 ~~~~i~~~-~-------~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~is 138 (167)
T 2re1_A 93 GAASIDGD-D-------TVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMIS 138 (167)
T ss_dssp TCSEEEEE-S-------SEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCEEE
T ss_pred CCceEEec-C-------CEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEEEE
Confidence 1 1111 1 12478999976 99999999999999999998865
No 16
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.58 E-value=0.00093 Score=63.80 Aligned_cols=66 Identities=14% Similarity=0.231 Sum_probs=50.9
Q ss_pred CcEEEEEEcCCCCChHHHHHHHHHhCCceEEEEEeee---cCcEEEEEEEEecCCCCcccHHHHHHHHHhhC
Q 014754 19 EPHVITVNCPDKTGLGCDICRIILDFGLYITKGDIST---DGIWCYIVLWVVPHSSSIIRWTNLKNRLMLEC 87 (419)
Q Consensus 19 ~~~~v~V~~~DrpgL~~~i~~~l~~~~lnI~~A~i~t---dG~~~~d~f~V~~~~g~~~~~~~l~~~Le~~L 87 (419)
....++|.|||||||++++++.|+++|+||.+++-++ .|.++| ...+..+++ ...+.|++.|+...
T Consensus 7 ~~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffm-r~~~~~~~~--~~~~~L~~~f~~la 75 (286)
T 3n0v_A 7 DTWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFI-RVEFRQPDD--FDEAGFRAGLAERS 75 (286)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEE-EEEEECCSS--CCHHHHHHHHHHHH
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEE-EEEEecCCC--CCHHHHHHHHHHHH
Confidence 3478999999999999999999999999999999884 566543 344433332 36788888887654
No 17
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.55 E-value=0.0014 Score=57.36 Aligned_cols=108 Identities=18% Similarity=0.114 Sum_probs=75.7
Q ss_pred CCcEEEEEEc-CCCCChHHHHHHHHHhCCceEEEEEee--ecCcEEEEEEEEecCCCCcccHHHHHHHHHhhCCCCCccc
Q 014754 18 GEPHVITVNC-PDKTGLGCDICRIILDFGLYITKGDIS--TDGIWCYIVLWVVPHSSSIIRWTNLKNRLMLECPSCSVSF 94 (419)
Q Consensus 18 ~~~~~v~V~~-~DrpgL~~~i~~~l~~~~lnI~~A~i~--tdG~~~~d~f~V~~~~g~~~~~~~l~~~Le~~L~~~~~~~ 94 (419)
.+...|+|.+ +|+||.++++...|+++|+||.--..+ .+|.. --.|.|... ..++..+.|++.... .. .
T Consensus 23 ~~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~~-~isf~v~~~-----~~~~a~~~l~~~~~~-l~-~ 94 (167)
T 2re1_A 23 KNQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGSEGTT-DFSFTVPRG-----DYKQTLEILSERQDS-IG-A 94 (167)
T ss_dssp CCCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC----CEE-EEEEEECGG-----GHHHHHHHHHHSSTT-TT-C
T ss_pred CCEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCee-EEEEEEech-----HHHHHHHHHHHHHHH-cC-C
Confidence 3678889984 999999999999999999999865433 25643 356777332 234444566664322 11 0
Q ss_pred ccccCCCCCCCCCeEEEEEEecC---cccHHHHHHHHHHhCCceEEE
Q 014754 95 YFNQLSTRPTCSPVYLLKLFCLD---RKGLLHDVTQVLCELELSIQR 138 (419)
Q Consensus 95 ~~~~~~~~~~~~~~~~i~v~~~D---rpGLl~~i~~~l~~~glnI~~ 138 (419)
. . -........|.|++.+ +||+++++..+|++.|+||..
T Consensus 95 ~-~----i~~~~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~ 136 (167)
T 2re1_A 95 A-S----IDGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQM 136 (167)
T ss_dssp S-E----EEEESSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCE
T ss_pred c-e----EEecCCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEE
Confidence 0 0 0112358889999987 999999999999999999996
No 18
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.54 E-value=0.002 Score=61.50 Aligned_cols=111 Identities=12% Similarity=0.121 Sum_probs=65.5
Q ss_pred CeeEEEEEEcCcchHHHHHHHHHHhCCeEEEEEEEeecCCCCeeEEEEEEecCCCcCCCHHHHHHHHHHHHHHhc-CCce
Q 014754 248 AHTLLQIHCVDHKGLLYDIMRTLKDCNMKISYGRFSPNSQGYRDLDLFIQQKDGKKIVDPEKQSAICSRLKMEML-HPLR 326 (419)
Q Consensus 248 ~~tvi~v~~~DrpGLL~~i~~~l~~~g~~I~~a~i~t~t~g~~~~D~F~v~~~g~~~~d~~~~~~l~~~L~~~l~-~~~~ 326 (419)
..++|++.|+|||||++.|+..|+++|+||.++.-.+....+.+.-...++...... ..+.|++.|.+.-. -.+.
T Consensus 5 ~~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~----~~~~L~~~f~~la~~~~m~ 80 (288)
T 3obi_A 5 HQYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAKVI----PLASLRTGFGVIAAKFTMG 80 (288)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSCCC----CHHHHHHHHHHHHHHTTCE
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCCCC----CHHHHHHHHHHHHHHcCCE
Confidence 457999999999999999999999999999999875311233221111112222111 25777777643322 1344
Q ss_pred EEEecCCCCcccccceeEEEeeCCCCccHHHHHHHHHHcCce
Q 014754 327 VIIANRGPDTELLVANPVELCGKGRPRVFYDVTLALKVLGIC 368 (419)
Q Consensus 327 v~i~~~~~~~~~~~~~~~~v~g~DRpGil~~vt~~l~~~~v~ 368 (419)
+.+..... ..++-|-...+---+.++-...++-.++
T Consensus 81 ~~l~~~~~------~~ri~vl~Sg~g~nl~~ll~~~~~g~l~ 116 (288)
T 3obi_A 81 WHMRDRET------RRKVMLLVSQSDHCLADILYRWRVGDLH 116 (288)
T ss_dssp EEEEETTS------CEEEEEEECSCCHHHHHHHHHHHTTSSC
T ss_pred EEeeccCC------CcEEEEEEcCCCCCHHHHHHHHHCCCCC
Confidence 55543321 1234443444444788888777665543
No 19
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.54 E-value=0.00033 Score=67.13 Aligned_cols=66 Identities=12% Similarity=0.214 Sum_probs=49.0
Q ss_pred CcEEEEEEcCCCCChHHHHHHHHHhCCceEEEEEeee---cCcEEEEEEEEecC--CCCcccHHHHHHHHHhh
Q 014754 19 EPHVITVNCPDKTGLGCDICRIILDFGLYITKGDIST---DGIWCYIVLWVVPH--SSSIIRWTNLKNRLMLE 86 (419)
Q Consensus 19 ~~~~v~V~~~DrpgL~~~i~~~l~~~~lnI~~A~i~t---dG~~~~d~f~V~~~--~g~~~~~~~l~~~Le~~ 86 (419)
....++|.|||||||++++++.|+++|+||.+++-++ .|.+|| ...+..+ + .....+.|++.|+..
T Consensus 9 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffm-r~~~~~~~~~-~~~~~~~L~~~f~~l 79 (292)
T 3lou_A 9 HQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFV-RCVFHATDDA-DALRVDALRREFEPI 79 (292)
T ss_dssp CEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEE-EEEEEECC-----CCHHHHHHHHHHH
T ss_pred CcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEE-EEEEEccCcc-cCCCHHHHHHHHHHH
Confidence 3578999999999999999999999999999999884 666543 3333222 2 012677888777664
No 20
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.53 E-value=0.0003 Score=67.29 Aligned_cols=116 Identities=11% Similarity=0.088 Sum_probs=67.8
Q ss_pred CcEEEEEEcCCCCChHHHHHHHHHhCCceEEEEEeee---cCcEEEEEEEEecCCCCcccHHHHHHHHHhhCCCCCcccc
Q 014754 19 EPHVITVNCPDKTGLGCDICRIILDFGLYITKGDIST---DGIWCYIVLWVVPHSSSIIRWTNLKNRLMLECPSCSVSFY 95 (419)
Q Consensus 19 ~~~~v~V~~~DrpgL~~~i~~~l~~~~lnI~~A~i~t---dG~~~~d~f~V~~~~g~~~~~~~l~~~Le~~L~~~~~~~~ 95 (419)
....++|.|||||||++++++.|+++|+||++++.++ .|.+|| ...+..+.. ..+.|++.|+....... +.
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffm-r~~~~~~~~---~~~~L~~~f~~la~~~~--m~ 79 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFM-RVSVEIPVA---GVNDFNSAFGKVVEKYN--AE 79 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEE-EEEEECCC------CHHHHHHHHHHGGGT--CE
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEE-EEEEEcCCC---CHHHHHHHHHHHHHHcC--Ce
Confidence 4578999999999999999999999999999999874 666543 333432221 35577777766432211 10
Q ss_pred cccCCCCCCCCCeEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEee
Q 014754 96 FNQLSTRPTCSPVYLLKLFCLDRKGLLHDVTQVLCELELSIQRVKVTTT 144 (419)
Q Consensus 96 ~~~~~~~~~~~~~~~i~v~~~DrpGLl~~i~~~l~~~glnI~~a~i~T~ 144 (419)
..... ........|-+.+ +---|..+......-.+++.-+-+.+.
T Consensus 80 ~~l~~--~~~~~ri~vl~Sg--~g~nl~~ll~~~~~g~l~~~i~~Visn 124 (287)
T 3nrb_A 80 WWFRP--RTDRKKVVIMVSK--FDHCLGDLLYRHRLGELDMEVVGIISN 124 (287)
T ss_dssp EEEEE--TTCCCEEEEEECS--CCHHHHHHHHHHHHTSSCCEEEEEEES
T ss_pred eEeec--cCCCcEEEEEEeC--CCcCHHHHHHHHHCCCCCeEEEEEEeC
Confidence 00000 1112233333333 334566777666665555444455543
No 21
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.51 E-value=0.00027 Score=54.49 Aligned_cols=64 Identities=19% Similarity=0.155 Sum_probs=44.9
Q ss_pred cEEEEEEcCCCCChHHHHHHHHHhCCceEEEEEeeecCcEEEEEEEEecCCCCcccHHHHHHHHHh
Q 014754 20 PHVITVNCPDKTGLGCDICRIILDFGLYITKGDISTDGIWCYIVLWVVPHSSSIIRWTNLKNRLML 85 (419)
Q Consensus 20 ~~~v~V~~~DrpgL~~~i~~~l~~~~lnI~~A~i~tdG~~~~d~f~V~~~~g~~~~~~~l~~~Le~ 85 (419)
.+.|.|.++||||++++|+++|++.|+||.+....+.+..+...|.+..++. ...+.+.+.|++
T Consensus 5 ~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v~~~~~--~~l~~l~~~L~~ 68 (88)
T 2ko1_A 5 LAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIFVKNT--DKLTTLMDKLRK 68 (88)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEEEESSH--HHHHHHHHHHTT
T ss_pred EEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEEEECCH--HHHHHHHHHHhc
Confidence 3578899999999999999999999999999998763324445565543321 133444444443
No 22
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.50 E-value=0.00044 Score=66.47 Aligned_cols=68 Identities=18% Similarity=0.192 Sum_probs=49.8
Q ss_pred CeEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeec-CCeEEEEEEEEcCCCCCCCHHHHHHHHHHHHHH
Q 014754 107 PVYLLKLFCLDRKGLLHDVTQVLCELELSIQRVKVTTTP-DGRVLDLFFITDNRELLHTKKRQDETCEQLHAV 178 (419)
Q Consensus 107 ~~~~i~v~~~DrpGLl~~i~~~l~~~glnI~~a~i~T~~-~~~~~d~F~V~~~~g~~~~~~~~~~l~~~L~~~ 178 (419)
..++|+|.|+|||||+++||++|+++|+||.+++.++.. .|++.-...+..+.+. ...++|++.|..+
T Consensus 21 ~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~~~~----~~~~~L~~~l~~l 89 (302)
T 3o1l_A 21 RTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRADTLP----FDLDGFREAFTPI 89 (302)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGGGSS----SCHHHHHHHHHHH
T ss_pred ceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecCCCC----CCHHHHHHHHHHH
Confidence 367899999999999999999999999999999998542 4665544444322211 1356777777654
No 23
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.43 E-value=0.0018 Score=61.78 Aligned_cols=37 Identities=14% Similarity=0.082 Sum_probs=34.1
Q ss_pred CeeEEEEEEcCcchHHHHHHHHHHhCCeEEEEEEEee
Q 014754 248 AHTLLQIHCVDHKGLLYDIMRTLKDCNMKISYGRFSP 284 (419)
Q Consensus 248 ~~tvi~v~~~DrpGLL~~i~~~l~~~g~~I~~a~i~t 284 (419)
..++|+|.|+|||||++.|+..|+++|+||.++.-.+
T Consensus 7 ~~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~ 43 (286)
T 3n0v_A 7 DTWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFD 43 (286)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeec
Confidence 4579999999999999999999999999999988774
No 24
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.39 E-value=0.0032 Score=60.24 Aligned_cols=38 Identities=13% Similarity=0.204 Sum_probs=34.6
Q ss_pred CCeeEEEEEEcCcchHHHHHHHHHHhCCeEEEEEEEee
Q 014754 247 PAHTLLQIHCVDHKGLLYDIMRTLKDCNMKISYGRFSP 284 (419)
Q Consensus 247 ~~~tvi~v~~~DrpGLL~~i~~~l~~~g~~I~~a~i~t 284 (419)
...++|++.|+|||||++.|+..|+++|+||.++.-.+
T Consensus 8 ~~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~ 45 (292)
T 3lou_A 8 PHQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFD 45 (292)
T ss_dssp CCEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CCcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEe
Confidence 34579999999999999999999999999999988774
No 25
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.34 E-value=0.001 Score=63.46 Aligned_cols=66 Identities=15% Similarity=0.210 Sum_probs=47.7
Q ss_pred CeEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeec-CCeEEEEEEEEcCCCCCCCHHHHHHHHHHHHHH
Q 014754 107 PVYLLKLFCLDRKGLLHDVTQVLCELELSIQRVKVTTTP-DGRVLDLFFITDNRELLHTKKRQDETCEQLHAV 178 (419)
Q Consensus 107 ~~~~i~v~~~DrpGLl~~i~~~l~~~glnI~~a~i~T~~-~~~~~d~F~V~~~~g~~~~~~~~~~l~~~L~~~ 178 (419)
..++|++.|+|||||+++||++|+++|+||.+++.++.. .|++.-...+..+. ..+++|++.|..+
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~------~~~~~L~~~f~~l 72 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEIPV------AGVNDFNSAFGKV 72 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCC---------CHHHHHHHHH
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEcCC------CCHHHHHHHHHHH
Confidence 468999999999999999999999999999999997433 55554443332221 1234677777664
No 26
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=97.31 E-value=0.0018 Score=56.64 Aligned_cols=111 Identities=16% Similarity=0.156 Sum_probs=72.4
Q ss_pred CCeeEEEEEE-cCcchHHHHHHHHHHhCCeEEEEEEEeecCC--CCeeEEEEEEecCCCcCCCHHHHHHHHHHHHHHhcC
Q 014754 247 PAHTLLQIHC-VDHKGLLYDIMRTLKDCNMKISYGRFSPNSQ--GYRDLDLFIQQKDGKKIVDPEKQSAICSRLKMEMLH 323 (419)
Q Consensus 247 ~~~tvi~v~~-~DrpGLL~~i~~~l~~~g~~I~~a~i~t~t~--g~~~~D~F~v~~~g~~~~d~~~~~~l~~~L~~~l~~ 323 (419)
++.+.|++.+ +|+||.++++..+|++.|+||..-..+. +. .+...=.|+++.+ +.++..++-..+...++
T Consensus 14 ~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~-~~~~~g~~~isf~V~~~-----d~~~a~~~L~~~~~~~~- 86 (167)
T 2dt9_A 14 LDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGV-PGHDPSRQQMAFTVKKD-----FAQEALEALEPVLAEIG- 86 (167)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCC-CCSCTTEEEEEEEEEGG-----GHHHHHHHHHHHHHHHC-
T ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCC-CCCCCCceEEEEEEehH-----HHHHHHHHHHHHHHHhC-
Confidence 4678888887 8999999999999999999998754432 11 1122224777431 12222222223333444
Q ss_pred CceEEEecCCCCcccccceeEEEeeCC---CCccHHHHHHHHHHcCceEEEEE
Q 014754 324 PLRVIIANRGPDTELLVANPVELCGKG---RPRVFYDVTLALKVLGICVFSAA 373 (419)
Q Consensus 324 ~~~v~i~~~~~~~~~~~~~~~~v~g~D---RpGil~~vt~~l~~~~v~I~~~~ 373 (419)
. .+.+... -..+.+.|.+ +||++..+.++|++.||||....
T Consensus 87 ~-~v~~~~~--------~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~is 130 (167)
T 2dt9_A 87 G-EAILRPD--------IAKVSIVGVGLASTPEVPAKMFQAVASTGANIEMIA 130 (167)
T ss_dssp C-EEEEECS--------EEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEEE
T ss_pred C-cEEEeCC--------EEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEEE
Confidence 2 3333211 2378999976 99999999999999999995554
No 27
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=97.30 E-value=0.00096 Score=58.34 Aligned_cols=66 Identities=18% Similarity=0.222 Sum_probs=53.1
Q ss_pred eEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeecC-CeEEEEEEEEcCCCCCCCHHHHHHHHHHHHHHH
Q 014754 108 VYLLKLFCLDRKGLLHDVTQVLCELELSIQRVKVTTTPD-GRVLDLFFITDNRELLHTKKRQDETCEQLHAVL 179 (419)
Q Consensus 108 ~~~i~v~~~DrpGLl~~i~~~l~~~glnI~~a~i~T~~~-~~~~d~F~V~~~~g~~~~~~~~~~l~~~L~~~l 179 (419)
.+.|+|...|+||+|++|+++|++.|+||.+..+.++.+ +...-+|.|. . +...++.|.+.|.++.
T Consensus 3 ~~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~-~-----d~~~leqI~kqL~Kl~ 69 (164)
T 2f1f_A 3 RRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTV-G-----DEKVLEQIEKQLHKLV 69 (164)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEE-S-----CHHHHHHHHHHHHHST
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEe-c-----cHHHHHHHHHHHcCCC
Confidence 367999999999999999999999999999999986654 6666666665 1 2556778888888764
No 28
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=97.10 E-value=0.0018 Score=56.68 Aligned_cols=66 Identities=14% Similarity=0.195 Sum_probs=52.9
Q ss_pred eEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeec-CCeEEEEEEEEcCCCCCCCHHHHHHHHHHHHHHH
Q 014754 108 VYLLKLFCLDRKGLLHDVTQVLCELELSIQRVKVTTTP-DGRVLDLFFITDNRELLHTKKRQDETCEQLHAVL 179 (419)
Q Consensus 108 ~~~i~v~~~DrpGLl~~i~~~l~~~glnI~~a~i~T~~-~~~~~d~F~V~~~~g~~~~~~~~~~l~~~L~~~l 179 (419)
...|.|...|+||+|++|+++|++.|+||.+..+..+. .+...-+|.|.. ++..++.|.+.|.++.
T Consensus 4 ~~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~------d~~~leql~kQL~Kl~ 70 (165)
T 2pc6_A 4 RHIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNG------PDEIVEQITKQLNKLI 70 (165)
T ss_dssp EEEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEE------CHHHHHHHHHHHHHST
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEec------cHHHHHHHHHHhcCCC
Confidence 36799999999999999999999999999999997655 366666666652 2556778888888764
No 29
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=97.09 E-value=0.0081 Score=53.06 Aligned_cols=137 Identities=17% Similarity=0.130 Sum_probs=85.5
Q ss_pred CCcEEEEE-EcCCCCChHHHHHHHHHhCCceEEEEEeee----cCcEEEEEEEEecCCCCcccHHHHHHHHHhhCCCCCc
Q 014754 18 GEPHVITV-NCPDKTGLGCDICRIILDFGLYITKGDIST----DGIWCYIVLWVVPHSSSIIRWTNLKNRLMLECPSCSV 92 (419)
Q Consensus 18 ~~~~~v~V-~~~DrpgL~~~i~~~l~~~~lnI~~A~i~t----dG~~~~d~f~V~~~~g~~~~~~~l~~~Le~~L~~~~~ 92 (419)
.+.+.|+| ..+|+||.++++...|+++|+||.---.++ +|.. -..|.+... +.++..+.|++.... ..
T Consensus 13 ~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~-~isf~v~~~-----d~~~a~~~l~~~~~~-~~ 85 (178)
T 2dtj_A 13 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTT-DITFTCPRS-----DGRRAMEILKKLQVQ-GN 85 (178)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEE-EEEEEEEHH-----HHHHHHHHHHTTTTT-TT
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCce-EEEEEEccc-----cHHHHHHHHHHHHHh-cC
Confidence 46778888 469999999999999999999987644332 4332 124666332 234444556553211 11
Q ss_pred ccccccCCCCCCCCCeEEEEEEec---CcccHHHHHHHHHHhCCceEEEEEEEeecCCeEEEEEEEEcCCCCCCCHHHHH
Q 014754 93 SFYFNQLSTRPTCSPVYLLKLFCL---DRKGLLHDVTQVLCELELSIQRVKVTTTPDGRVLDLFFITDNRELLHTKKRQD 169 (419)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~i~v~~~---DrpGLl~~i~~~l~~~glnI~~a~i~T~~~~~~~d~F~V~~~~g~~~~~~~~~ 169 (419)
.. ..........|.|+|. +.||+++++..+|++.|+||.. +.|+.. . -.|.|. .++.+
T Consensus 86 -~~-----~v~~~~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~--istSe~-~--Is~vV~--------~~d~~ 146 (178)
T 2dtj_A 86 -WT-----NVLYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIEL--ISTSEI-R--ISVLIR--------EDDLD 146 (178)
T ss_dssp -CS-----EEEEESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCE--EEEETT-E--EEEEEE--------GGGHH
T ss_pred -CC-----eEEEeCCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEE--EEcCCC-e--EEEEEe--------HHHHH
Confidence 00 0012346788899986 8999999999999999999996 334321 1 234442 23344
Q ss_pred HHHHHHHHHHc
Q 014754 170 ETCEQLHAVLG 180 (419)
Q Consensus 170 ~l~~~L~~~l~ 180 (419)
+..+.|.+.+.
T Consensus 147 ~Av~~Lh~~F~ 157 (178)
T 2dtj_A 147 AAARALHEQFQ 157 (178)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHc
Confidence 44455666663
No 30
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=97.07 E-value=0.0021 Score=56.92 Aligned_cols=110 Identities=16% Similarity=0.146 Sum_probs=71.3
Q ss_pred CCeeEEEEE-EcCcchHHHHHHHHHHhCCeEEEEEEEeecCC-CCeeEEEEEEecCCCcCCCHHHHHHHHHHHHHHhcCC
Q 014754 247 PAHTLLQIH-CVDHKGLLYDIMRTLKDCNMKISYGRFSPNSQ-GYRDLDLFIQQKDGKKIVDPEKQSAICSRLKMEMLHP 324 (419)
Q Consensus 247 ~~~tvi~v~-~~DrpGLL~~i~~~l~~~g~~I~~a~i~t~t~-g~~~~D~F~v~~~g~~~~d~~~~~~l~~~L~~~l~~~ 324 (419)
.+.+.|+|. ..|+||.++++...|++.|+||..-..++... .+...=.|.+.. +..++..+.|.+ +...
T Consensus 13 ~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~--------~d~~~a~~~l~~-~~~~ 83 (178)
T 2dtj_A 13 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPR--------SDGRRAMEILKK-LQVQ 83 (178)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEH--------HHHHHHHHHHHT-TTTT
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEcc--------ccHHHHHHHHHH-HHHh
Confidence 356778884 58999999999999999999998776553100 111111266643 122333344433 2221
Q ss_pred c---eEEEecCCCCcccccceeEEEeeC---CCCccHHHHHHHHHHcCceEEEEE
Q 014754 325 L---RVIIANRGPDTELLVANPVELCGK---GRPRVFYDVTLALKVLGICVFSAA 373 (419)
Q Consensus 325 ~---~v~i~~~~~~~~~~~~~~~~v~g~---DRpGil~~vt~~l~~~~v~I~~~~ 373 (419)
+ .+.+.. .-..+.+.|. ++||+...+.++|++.||||....
T Consensus 84 ~~~~~v~~~~--------~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~is 130 (178)
T 2dtj_A 84 GNWTNVLYDD--------QVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELIS 130 (178)
T ss_dssp TTCSEEEEES--------CEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred cCCCeEEEeC--------CeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEEEE
Confidence 1 122211 1247888886 899999999999999999998865
No 31
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=96.80 E-value=0.18 Score=52.90 Aligned_cols=191 Identities=14% Similarity=0.112 Sum_probs=119.4
Q ss_pred CCcEEEEEEcC---CCCChHHHHHHHHHhCCceEEEEEeeecCcEEEEEEEEecCCCCcccHHHHHHHHHhhCCCCCccc
Q 014754 18 GEPHVITVNCP---DKTGLGCDICRIILDFGLYITKGDISTDGIWCYIVLWVVPHSSSIIRWTNLKNRLMLECPSCSVSF 94 (419)
Q Consensus 18 ~~~~~v~V~~~---DrpgL~~~i~~~l~~~~lnI~~A~i~tdG~~~~d~f~V~~~~g~~~~~~~l~~~Le~~L~~~~~~~ 94 (419)
.+...|.|++. ++||+.+++..+|++.|.||.-.. +... -.+|.|... +.++..+.|.+.+.......
T Consensus 353 ~~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~~is--tSe~--~Is~vI~~~-----d~~~Av~aLh~~f~~~~t~~ 423 (600)
T 3l76_A 353 KGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMIS--TSEV--KVSCVIDQR-----DADRAIAALSNAFGVTLSPP 423 (600)
T ss_dssp CSEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCCEEE--ECSS--EEEEEEEGG-----GHHHHHHHHHHHTTCCBCCC
T ss_pred CCeEEEEEECCCcccCccHHHHHHHHHHhCCCcEEEEe--cCCC--EEEEEEcHH-----HHHHHHHHHHHhhcccCCCc
Confidence 45778899985 799999999999999999997544 3333 245556332 34444467777763321000
Q ss_pred cc-----ccC--CCCCCCCCeEEEEEEe-cCcccHHHHHHHHHHhCCceEEEEEEEeec---CC--eEEEEEEEEcCCCC
Q 014754 95 YF-----NQL--STRPTCSPVYLLKLFC-LDRKGLLHDVTQVLCELELSIQRVKVTTTP---DG--RVLDLFFITDNREL 161 (419)
Q Consensus 95 ~~-----~~~--~~~~~~~~~~~i~v~~-~DrpGLl~~i~~~l~~~glnI~~a~i~T~~---~~--~~~d~F~V~~~~g~ 161 (419)
.. ... ..-........|+|.. +|+||+.++|.+.|+++|+||.--...... +| ..--.|.|.
T Consensus 424 ~~~~~~~~~~~v~Gia~~~~~a~i~i~~~~~~~g~~~~if~~La~~~I~vDmI~q~~~~~~~~g~~~~~isftv~----- 498 (600)
T 3l76_A 424 KNQTDTSHLPAVRGVALDQDQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVA----- 498 (600)
T ss_dssp CCCCC---CCSCCEEEEECSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCEEEEEEECCCSSSSCEEEEEEEEE-----
T ss_pred cccccccccCceEEEEeeCCEEEEEEecCCCCccHHHHHHHHHHHcCCcEEEEEecccccccCCCccceEEEEEe-----
Confidence 00 000 0001123566777754 899999999999999999999643333221 23 233345554
Q ss_pred CCCHHHHHHHHHHHHHHHcccccccccccCCCccccCCCcCCCcHHHHHHhhhhccchhhhhhhccCCCccCCCccEEEE
Q 014754 162 LHTKKRQDETCEQLHAVLGESCISCELQLAGPECDCHQGVTSLSPVVAEELFRFELSDKETRLQALSPDMTKLKKANVVV 241 (419)
Q Consensus 162 ~~~~~~~~~l~~~L~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~rrl~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~V~v 241 (419)
.+.+++..+.|++. ..+. .+.++.+
T Consensus 499 ---~~d~~~a~~~l~~~-~~~~---------------------------------------------------~~~~v~~ 523 (600)
T 3l76_A 499 ---EGDSSQAEAILQPL-IKDW---------------------------------------------------LDAAIVV 523 (600)
T ss_dssp ---HHHHHHHHHHHHHH-TTTS---------------------------------------------------TTCEEEE
T ss_pred ---HHHHHHHHHHHHHH-HHhc---------------------------------------------------CCceEEE
Confidence 23334444444442 1110 0123454
Q ss_pred eCCCCCCeeEEEEEE---cCcchHHHHHHHHHHhCCeEEEEEE
Q 014754 242 DNSLSPAHTLLQIHC---VDHKGLLYDIMRTLKDCNMKISYGR 281 (419)
Q Consensus 242 ~n~~~~~~tvi~v~~---~DrpGLL~~i~~~l~~~g~~I~~a~ 281 (419)
+ .+...|.+.| +.+||+.+.+.++|.+.|+||..-.
T Consensus 524 ~----~~~akVSiVG~GM~~~~Gvaa~~f~aL~~~~Ini~mis 562 (600)
T 3l76_A 524 N----KAIAKVSIVGSGMIGHPGVAAHFFAALAQENINIEMIA 562 (600)
T ss_dssp E----CCEEEEEEECGGGTTCTTHHHHHHHHHHTTTCCCCEEE
T ss_pred e----CCeEEEEEECcccccCccHHHHHHHHHHHCCCceEEEE
Confidence 4 3577888888 5799999999999999999997665
No 32
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=96.67 E-value=0.0033 Score=54.92 Aligned_cols=105 Identities=10% Similarity=0.025 Sum_probs=71.9
Q ss_pred CCCcEEEEEEc-CCCCChHHHHHHHHHhCCceEEEEEee-e---cCcEEEEEEEEecCCCCcccHHHHHHHHHh---hCC
Q 014754 17 PGEPHVITVNC-PDKTGLGCDICRIILDFGLYITKGDIS-T---DGIWCYIVLWVVPHSSSIIRWTNLKNRLML---ECP 88 (419)
Q Consensus 17 ~~~~~~v~V~~-~DrpgL~~~i~~~l~~~~lnI~~A~i~-t---dG~~~~d~f~V~~~~g~~~~~~~l~~~Le~---~L~ 88 (419)
..+...|+|.+ +|+||..+++...|+++|+||.--... + .|.. --.|.|...+ .++..+.|++ .+.
T Consensus 13 ~~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~-~isf~V~~~d-----~~~a~~~L~~~~~~~~ 86 (167)
T 2dt9_A 13 DLDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQ-QMAFTVKKDF-----AQEALEALEPVLAEIG 86 (167)
T ss_dssp ECSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEE-EEEEEEEGGG-----HHHHHHHHHHHHHHHC
T ss_pred eCCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCce-EEEEEEehHH-----HHHHHHHHHHHHHHhC
Confidence 34677888877 999999999999999999999764332 1 3332 3457774322 2222233433 221
Q ss_pred CCCcccccccCCCCCCCCCeEEEEEEecC---cccHHHHHHHHHHhCCceEEE
Q 014754 89 SCSVSFYFNQLSTRPTCSPVYLLKLFCLD---RKGLLHDVTQVLCELELSIQR 138 (419)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~i~v~~~D---rpGLl~~i~~~l~~~glnI~~ 138 (419)
. . . ........+.|+|.+ +||+++++..+|++.|+||..
T Consensus 87 ~--~-v--------~~~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~ 128 (167)
T 2dt9_A 87 G--E-A--------ILRPDIAKVSIVGVGLASTPEVPAKMFQAVASTGANIEM 128 (167)
T ss_dssp C--E-E--------EEECSEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCE
T ss_pred C--c-E--------EEeCCEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEE
Confidence 1 0 0 112457789999976 999999999999999999963
No 33
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.61 E-value=0.007 Score=53.98 Aligned_cols=66 Identities=12% Similarity=0.275 Sum_probs=50.9
Q ss_pred eEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeecC-CeEEEEEEEEcCCCCCCCHHHHHHHHHHHHHHH
Q 014754 108 VYLLKLFCLDRKGLLHDVTQVLCELELSIQRVKVTTTPD-GRVLDLFFITDNRELLHTKKRQDETCEQLHAVL 179 (419)
Q Consensus 108 ~~~i~v~~~DrpGLl~~i~~~l~~~glnI~~a~i~T~~~-~~~~d~F~V~~~~g~~~~~~~~~~l~~~L~~~l 179 (419)
...|+|...|+||.|++|+++|++.|+||.+..+..+.+ +...-++.|... +..++.|.+.|.++.
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~------e~~ieqL~kQL~KLi 95 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD------DKTIEQIEKQAYKLV 95 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC------TTHHHHHHHHHTTST
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC------HHHHHHHHHHhcCcC
Confidence 578999999999999999999999999999988864444 566666666532 234667777777654
No 34
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=96.59 E-value=0.22 Score=43.91 Aligned_cols=111 Identities=14% Similarity=0.162 Sum_probs=72.7
Q ss_pred CeEEEEEE-ecCcccHHHHHHHHHHhCCceEEEEEEEeec--CCeEEEEEEEEcCCCCCCCHHHHHHHHHHHHHHHcccc
Q 014754 107 PVYLLKLF-CLDRKGLLHDVTQVLCELELSIQRVKVTTTP--DGRVLDLFFITDNRELLHTKKRQDETCEQLHAVLGESC 183 (419)
Q Consensus 107 ~~~~i~v~-~~DrpGLl~~i~~~l~~~glnI~~a~i~T~~--~~~~~d~F~V~~~~g~~~~~~~~~~l~~~L~~~l~~~~ 183 (419)
+.+.|+|. .+|+||.+++|...|+++|+||.--...... .|..--.|.|.... .++..+.|.+.. .+.
T Consensus 15 ~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~~--------~~~a~~~L~~~~-~el 85 (181)
T 3s1t_A 15 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDV--------GPAAVEKLDSLR-NEI 85 (181)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETTT--------HHHHHHHHHHTH-HHH
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehhH--------HHHHHHHHHHHH-Hhc
Confidence 34556654 5899999999999999999999844332122 45555667775432 122223333321 110
Q ss_pred cccccccCCCccccCCCcCCCcHHHHHHhhhhccchhhhhhhccCCCccCCCccEEEEeCCCCCCeeEEEEEEc---Ccc
Q 014754 184 ISCELQLAGPECDCHQGVTSLSPVVAEELFRFELSDKETRLQALSPDMTKLKKANVVVDNSLSPAHTLLQIHCV---DHK 260 (419)
Q Consensus 184 ~~~~~~l~~~~~~~~~~~~~~~rrl~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~V~v~n~~~~~~tvi~v~~~---Drp 260 (419)
....|.++ .+...+.+.|. ++|
T Consensus 86 ---------------------------------------------------~~~~v~~~----~~va~VsvVG~gm~~~~ 110 (181)
T 3s1t_A 86 ---------------------------------------------------GFSQLLYD----DHIGKVSLIGAGMRSHP 110 (181)
T ss_dssp ---------------------------------------------------CCSEEEEE----SCEEEEEEEEECCTTCH
T ss_pred ---------------------------------------------------CcceEEEe----CCEEEEEEEecccccCc
Confidence 01234443 25678888886 799
Q ss_pred hHHHHHHHHHHhCCeEEEEEE
Q 014754 261 GLLYDIMRTLKDCNMKISYGR 281 (419)
Q Consensus 261 GLL~~i~~~l~~~g~~I~~a~ 281 (419)
|+.+.+.++|.+.|+||....
T Consensus 111 Gvaa~~f~aLa~~~InI~~Is 131 (181)
T 3s1t_A 111 GVTATFCEALAAVGVNIELIS 131 (181)
T ss_dssp HHHHHHHHHHHHTTCCCCEEE
T ss_pred hHHHHHHHHHHHCCCcEEEEE
Confidence 999999999999999998766
No 35
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=96.50 E-value=0.011 Score=51.56 Aligned_cols=66 Identities=14% Similarity=0.154 Sum_probs=49.6
Q ss_pred eeEEEEEEcCcchHHHHHHHHHHhCCeEEEEEEEeecCCC-CeeEEEEEEecCCCcCCCHHHHHHHHHHHHHHh
Q 014754 249 HTLLQIHCVDHKGLLYDIMRTLKDCNMKISYGRFSPNSQG-YRDLDLFIQQKDGKKIVDPEKQSAICSRLKMEM 321 (419)
Q Consensus 249 ~tvi~v~~~DrpGLL~~i~~~l~~~g~~I~~a~i~t~t~g-~~~~D~F~v~~~g~~~~d~~~~~~l~~~L~~~l 321 (419)
...|+|...||||+|++|+.+|++.|+||.+..+.. +.. +...=+|.++ | ++..++.|.++|.+..
T Consensus 3 ~~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~-t~d~~~sriti~V~--~----d~~~leqI~kqL~Kl~ 69 (164)
T 2f1f_A 3 RRILSVLLENESGALSRVIGLFSQRGYNIESLTVAP-TDDPTLSRMTIQTV--G----DEKVLEQIEKQLHKLV 69 (164)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEE-CSCSSEEEEEEEEE--S----CHHHHHHHHHHHHHST
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeee-cCCCCEEEEEEEEe--c----cHHHHHHHHHHHcCCC
Confidence 357899999999999999999999999999999875 342 3333234444 2 2467899998886543
No 36
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=96.40 E-value=0.041 Score=48.68 Aligned_cols=111 Identities=17% Similarity=0.164 Sum_probs=70.5
Q ss_pred CeeEEEEE-EcCcchHHHHHHHHHHhCCeEEEEEEEeecCC--CCeeEEEEEEecCCCcCCCHHHHHHHHHHHHHHhcCC
Q 014754 248 AHTLLQIH-CVDHKGLLYDIMRTLKDCNMKISYGRFSPNSQ--GYRDLDLFIQQKDGKKIVDPEKQSAICSRLKMEMLHP 324 (419)
Q Consensus 248 ~~tvi~v~-~~DrpGLL~~i~~~l~~~g~~I~~a~i~t~t~--g~~~~D~F~v~~~g~~~~d~~~~~~l~~~L~~~l~~~ 324 (419)
+.+.|+|. -.|+||.+++|...|++.|++|..-.-+. +. .+...=.|+++.+. .+...++.+.+...+. .
T Consensus 15 ~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~-s~~~~g~~~isftv~~~~-----~~~a~~~L~~~~~el~-~ 87 (181)
T 3s1t_A 15 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNV-SKVEDGKTDITFTCSRDV-----GPAAVEKLDSLRNEIG-F 87 (181)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECC-CCTTTCEEEEEEEEETTT-----HHHHHHHHHHTHHHHC-C
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecC-CcccCCccEEEEEEehhH-----HHHHHHHHHHHHHhcC-c
Confidence 45666664 47999999999999999999997554321 12 22223347775421 1222222222333332 2
Q ss_pred ceEEEecCCCCcccccceeEEEeeC---CCCccHHHHHHHHHHcCceEEEEE
Q 014754 325 LRVIIANRGPDTELLVANPVELCGK---GRPRVFYDVTLALKVLGICVFSAA 373 (419)
Q Consensus 325 ~~v~i~~~~~~~~~~~~~~~~v~g~---DRpGil~~vt~~l~~~~v~I~~~~ 373 (419)
..+.+... -..+.+.|. ++||+...+.++|++.||||....
T Consensus 88 ~~v~~~~~--------va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is 131 (181)
T 3s1t_A 88 SQLLYDDH--------IGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 131 (181)
T ss_dssp SEEEEESC--------EEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred ceEEEeCC--------EEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE
Confidence 23333211 237888886 899999999999999999998887
No 37
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.20 E-value=0.013 Score=51.09 Aligned_cols=64 Identities=11% Similarity=0.079 Sum_probs=45.8
Q ss_pred eeEEEeeCCCCccHHHHHHHHHHcCceEEEEEeeeeeccCceeeEEEEEEEcCCCCCCcchHHHHHHHHHHHH
Q 014754 342 NPVELCGKGRPRVFYDVTLALKVLGICVFSAAIGRYSTSEREWEIYRFLLDENCKFQLSSMVAREQIVDRVRR 414 (419)
Q Consensus 342 ~~~~v~g~DRpGil~~vt~~l~~~~v~I~~~~~~t~~~~~~~~~~~~f~~~d~~g~~~~~~~~~~~~~~~~~~ 414 (419)
+.+.+...||||+|.+|+.+|+++|+||.++.+......+. ..-+|.+... +....++...+++
T Consensus 5 ~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~--sritivV~~d-------~~~leql~kQL~K 68 (165)
T 2pc6_A 5 HIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTL--SRMTLVTNGP-------DEIVEQITKQLNK 68 (165)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTE--EEEEEEEEEC-------HHHHHHHHHHHHH
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCE--EEEEEEEecc-------HHHHHHHHHHhcC
Confidence 47888999999999999999999999999999875322233 5566666321 3344555555544
No 38
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=95.99 E-value=0.024 Score=49.24 Aligned_cols=34 Identities=21% Similarity=0.360 Sum_probs=31.9
Q ss_pred EEEEEEcCcchHHHHHHHHHHhCCeEEEEEEEee
Q 014754 251 LLQIHCVDHKGLLYDIMRTLKDCNMKISYGRFSP 284 (419)
Q Consensus 251 vi~v~~~DrpGLL~~i~~~l~~~g~~I~~a~i~t 284 (419)
-|+|.|.||+|||.+|+++|.++++||....+.+
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~ 35 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDP 35 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEET
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEec
Confidence 3789999999999999999999999999999983
No 39
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=95.98 E-value=0.042 Score=49.42 Aligned_cols=113 Identities=15% Similarity=0.134 Sum_probs=70.5
Q ss_pred CCeeEEEEEE-cCcchHHHHHHHHHHhCCeEEEEEEEeecCC-CCeeEEEEEEecCCCcCCCHHHHHHHHHHHHHHhcCC
Q 014754 247 PAHTLLQIHC-VDHKGLLYDIMRTLKDCNMKISYGRFSPNSQ-GYRDLDLFIQQKDGKKIVDPEKQSAICSRLKMEMLHP 324 (419)
Q Consensus 247 ~~~tvi~v~~-~DrpGLL~~i~~~l~~~g~~I~~a~i~t~t~-g~~~~D~F~v~~~g~~~~d~~~~~~l~~~L~~~l~~~ 324 (419)
++.+.|+|.+ +|+||++++|...|++.|+||.--.-+.... .....-.|.+.. .+.....++...+...+..
T Consensus 33 ~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~-----~d~~~~~~~l~~~~~~~~~- 106 (200)
T 4go7_X 33 RSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSR-----DVGPAAVEKLDSLRNEIGF- 106 (200)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEG-----GGHHHHHHHHHTTHHHHCC-
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecch-----hhHHHHHHHHHHHHhhhce-
Confidence 4567788765 8999999999999999999997643221011 122333465532 1112222222233333321
Q ss_pred ceEEEecCCCCcccccceeEEEeeC---CCCccHHHHHHHHHHcCceEEEEE
Q 014754 325 LRVIIANRGPDTELLVANPVELCGK---GRPRVFYDVTLALKVLGICVFSAA 373 (419)
Q Consensus 325 ~~v~i~~~~~~~~~~~~~~~~v~g~---DRpGil~~vt~~l~~~~v~I~~~~ 373 (419)
..+.+... -..+.++|. .+||+-..+..+|++.||||.-..
T Consensus 107 ~~v~~~~~--------iakVSvVG~GM~~~~GVaak~F~aLa~~~INI~mIs 150 (200)
T 4go7_X 107 SQLLYDDH--------IGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 150 (200)
T ss_dssp SEEEEECC--------EEEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred eeEEEecC--------eeeeeeeccccccCCCcHHHHHHHHHHCCCCEEEEE
Confidence 22222111 237888884 889999999999999999998886
No 40
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=95.76 E-value=0.036 Score=48.02 Aligned_cols=60 Identities=17% Similarity=0.359 Sum_probs=44.9
Q ss_pred EEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeecCCeEEEEEEEEcCCCCCCCHHHHHHHHHHHHHH
Q 014754 110 LLKLFCLDRKGLLHDVTQVLCELELSIQRVKVTTTPDGRVLDLFFITDNRELLHTKKRQDETCEQLHAV 178 (419)
Q Consensus 110 ~i~v~~~DrpGLl~~i~~~l~~~glnI~~a~i~T~~~~~~~d~F~V~~~~g~~~~~~~~~~l~~~L~~~ 178 (419)
.|+|.+.||+|++++|+.+|+.+++||..+.+.+ +|. +++.-+ ..+.+.+..|...+..+
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~--~g~----i~~~~~---~~~~~~~~~L~~~l~~i 61 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDP--IGR----IYLNFA---ELEFESFSSLMAEIRRI 61 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEET--TTE----EEEEEC---CCCHHHHHHHHHHHHHS
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEec--CCE----EEEEEE---eCCHHHHHHHHHHHHcC
Confidence 4889999999999999999999999999999964 344 444332 12345566676666664
No 41
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=95.73 E-value=0.028 Score=50.61 Aligned_cols=110 Identities=15% Similarity=0.111 Sum_probs=70.3
Q ss_pred CCCcEEEEEEc-CCCCChHHHHHHHHHhCCceEEEEE--eee--cCcEEEEEEEEecCCCCcccHHHHHHHHHhhCCCCC
Q 014754 17 PGEPHVITVNC-PDKTGLGCDICRIILDFGLYITKGD--IST--DGIWCYIVLWVVPHSSSIIRWTNLKNRLMLECPSCS 91 (419)
Q Consensus 17 ~~~~~~v~V~~-~DrpgL~~~i~~~l~~~~lnI~~A~--i~t--dG~~~~d~f~V~~~~g~~~~~~~l~~~Le~~L~~~~ 91 (419)
..+...|+|.+ ||+||+.++|...|++.|+||-=-- ++. ++. .-..|.+... ..++..+.|++......
T Consensus 32 ~~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~-~~~sftv~~~-----d~~~~~~~l~~~~~~~~ 105 (200)
T 4go7_X 32 DRSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGK-TDITFTCSRD-----VGPAAVEKLDSLRNEIG 105 (200)
T ss_dssp ECSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCE-EEEEEEEEGG-----GHHHHHHHHHTTHHHHC
T ss_pred cCCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccc-eEEEEecchh-----hHHHHHHHHHHHHhhhc
Confidence 34577888875 9999999999999999999986432 111 343 3345766332 23333333333211000
Q ss_pred cccccccCCCCCCCCCeEEEEEEe---cCcccHHHHHHHHHHhCCceEEEE
Q 014754 92 VSFYFNQLSTRPTCSPVYLLKLFC---LDRKGLLHDVTQVLCELELSIQRV 139 (419)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~i~v~~---~DrpGLl~~i~~~l~~~glnI~~a 139 (419)
. . . .........|.|+| ...||+.+++..+|++.|+||.--
T Consensus 106 ~----~-~--v~~~~~iakVSvVG~GM~~~~GVaak~F~aLa~~~INI~mI 149 (200)
T 4go7_X 106 F----S-Q--LLYDDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELI 149 (200)
T ss_dssp C----S-E--EEEECCEEEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEE
T ss_pred e----e-e--EEEecCeeeeeeeccccccCCCcHHHHHHHHHHCCCCEEEE
Confidence 0 0 0 01123466777776 578999999999999999999944
No 42
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=95.67 E-value=0.017 Score=52.33 Aligned_cols=49 Identities=22% Similarity=0.331 Sum_probs=36.7
Q ss_pred eEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeec----CCeEEEEEEEE
Q 014754 108 VYLLKLFCLDRKGLLHDVTQVLCELELSIQRVKVTTTP----DGRVLDLFFIT 156 (419)
Q Consensus 108 ~~~i~v~~~DrpGLl~~i~~~l~~~glnI~~a~i~T~~----~~~~~d~F~V~ 156 (419)
...|.|.+.||||+|++|+++|+++++||...+..+.. ++.+.-.+.+.
T Consensus 4 ~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IEV~ 56 (223)
T 1y7p_A 4 LRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIE 56 (223)
T ss_dssp CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEEC
T ss_pred eEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEEEC
Confidence 46789999999999999999999999999999998754 55665554443
No 43
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=95.55 E-value=0.54 Score=47.01 Aligned_cols=110 Identities=20% Similarity=0.225 Sum_probs=73.3
Q ss_pred CeEEEEEE-ecCcccHHHHHHHHHHhCCceEEEEEEEeec--CCeEEEEEEEEcCCCCCCCHHHHHHHHHHHHHHHcccc
Q 014754 107 PVYLLKLF-CLDRKGLLHDVTQVLCELELSIQRVKVTTTP--DGRVLDLFFITDNRELLHTKKRQDETCEQLHAVLGESC 183 (419)
Q Consensus 107 ~~~~i~v~-~~DrpGLl~~i~~~l~~~glnI~~a~i~T~~--~~~~~d~F~V~~~~g~~~~~~~~~~l~~~L~~~l~~~~ 183 (419)
+.+.|+|. .+|+||.+++|.+.|+++|+||.-....|.. .|...-.|.|...+ . ++..+.|++. ..+.
T Consensus 263 ~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~~-----~---~~a~~~l~~~-~~~~ 333 (421)
T 3ab4_A 263 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRSD-----G---RRAMEILKKL-QVQG 333 (421)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETTT-----H---HHHHHHHHHH-HTTT
T ss_pred CEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEechh-----H---HHHHHHHHHH-HHHc
Confidence 35567777 5899999999999999999999955443332 34444557665321 2 2223334432 1110
Q ss_pred cccccccCCCccccCCCcCCCcHHHHHHhhhhccchhhhhhhccCCCccCCCccEEEEeCCCCCCeeEEEEEEc---Ccc
Q 014754 184 ISCELQLAGPECDCHQGVTSLSPVVAEELFRFELSDKETRLQALSPDMTKLKKANVVVDNSLSPAHTLLQIHCV---DHK 260 (419)
Q Consensus 184 ~~~~~~l~~~~~~~~~~~~~~~rrl~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~V~v~n~~~~~~tvi~v~~~---Drp 260 (419)
....+.++ .+..++.|.|. +.|
T Consensus 334 ---------------------------------------------------~~~~v~~~----~~~a~vsvVG~gm~~~~ 358 (421)
T 3ab4_A 334 ---------------------------------------------------NWTNVLYD----DQVGKVSLVGAGMKSHP 358 (421)
T ss_dssp ---------------------------------------------------TCSEEEEE----CCEEEEEEECGGGTSCT
T ss_pred ---------------------------------------------------CCceEEEe----CCeEEEEEEccCcccCc
Confidence 00134443 35778899986 689
Q ss_pred hHHHHHHHHHHhCCeEEEEE
Q 014754 261 GLLYDIMRTLKDCNMKISYG 280 (419)
Q Consensus 261 GLL~~i~~~l~~~g~~I~~a 280 (419)
|++..+..+|.+.|+||.--
T Consensus 359 Gv~a~~f~aL~~~~InI~~i 378 (421)
T 3ab4_A 359 GVTAEFMEALRDVNVNIELI 378 (421)
T ss_dssp THHHHHHHHHHHTTCCCCEE
T ss_pred cHHHHHHHHHHHCCCCEEEE
Confidence 99999999999999999833
No 44
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=95.43 E-value=0.18 Score=50.57 Aligned_cols=112 Identities=16% Similarity=0.185 Sum_probs=71.3
Q ss_pred CCeeEEEEE-EcCcchHHHHHHHHHHhCCeEEEEEEEeecCC--CCeeEEEEEEecCCCcCCCHHHHHHHHHHHHHHhcC
Q 014754 247 PAHTLLQIH-CVDHKGLLYDIMRTLKDCNMKISYGRFSPNSQ--GYRDLDLFIQQKDGKKIVDPEKQSAICSRLKMEMLH 323 (419)
Q Consensus 247 ~~~tvi~v~-~~DrpGLL~~i~~~l~~~g~~I~~a~i~t~t~--g~~~~D~F~v~~~g~~~~d~~~~~~l~~~L~~~l~~ 323 (419)
.+.+.|+|. -.|+||.+++|...|.+.|+||..-..++ .. .+...=.|+++.+ +.++..++.+.+...+.-
T Consensus 262 ~~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~-s~~~~g~~~isf~v~~~-----~~~~a~~~l~~~~~~~~~ 335 (421)
T 3ab4_A 262 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNV-FSVEDGTTDITFTCPRS-----DGRRAMEILKKLQVQGNW 335 (421)
T ss_dssp CSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECC-CC--CCEEEEEEEEETT-----THHHHHHHHHHHHTTTTC
T ss_pred CCEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccC-ccccCCcceEEEEEech-----hHHHHHHHHHHHHHHcCC
Confidence 356778888 58999999999999999999998765443 12 1212224677541 222222222222222221
Q ss_pred CceEEEecCCCCcccccceeEEEeeC---CCCccHHHHHHHHHHcCceEEEEE
Q 014754 324 PLRVIIANRGPDTELLVANPVELCGK---GRPRVFYDVTLALKVLGICVFSAA 373 (419)
Q Consensus 324 ~~~v~i~~~~~~~~~~~~~~~~v~g~---DRpGil~~vt~~l~~~~v~I~~~~ 373 (419)
-.+.+... -..+.+.|. ++||+...+..+|++.||||....
T Consensus 336 -~~v~~~~~--------~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~is 379 (421)
T 3ab4_A 336 -TNVLYDDQ--------VGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELIS 379 (421)
T ss_dssp -SEEEEECC--------EEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCCEEE
T ss_pred -ceEEEeCC--------eEEEEEEccCcccCccHHHHHHHHHHHCCCCEEEEE
Confidence 12222111 236888885 799999999999999999998554
No 45
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=95.43 E-value=0.074 Score=47.34 Aligned_cols=113 Identities=12% Similarity=0.123 Sum_probs=69.0
Q ss_pred cEEEEEEcCCCCChHHHHHHHHHhCCceEEEEEee-e-cCcEEEEEEEEecCCCCcccHHHHHHHHHhhCCCCCcccccc
Q 014754 20 PHVITVNCPDKTGLGCDICRIILDFGLYITKGDIS-T-DGIWCYIVLWVVPHSSSIIRWTNLKNRLMLECPSCSVSFYFN 97 (419)
Q Consensus 20 ~~~v~V~~~DrpgL~~~i~~~l~~~~lnI~~A~i~-t-dG~~~~d~f~V~~~~g~~~~~~~l~~~Le~~L~~~~~~~~~~ 97 (419)
...+.|+..|+||.+++++++|+..|+||.+-.+. + +....--++.|...+. ..+.|.+.|.+..+-.. -....
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~e~---~ieqL~kQL~KLidVik-V~dl~ 104 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGDDK---TIEQIEKQAYKLVEVVK-VTPID 104 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEECTT---HHHHHHHHHTTSTTEEE-EEECC
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECCHH---HHHHHHHHhcCcCceEE-EEEec
Confidence 35899999999999999999999999999988876 3 4232234566643332 45666666665432100 00000
Q ss_pred cCCCCCCCCCeEEEEEEecCcccHHHHHHHHHHhCCceEEEE
Q 014754 98 QLSTRPTCSPVYLLKLFCLDRKGLLHDVTQVLCELELSIQRV 139 (419)
Q Consensus 98 ~~~~~~~~~~~~~i~v~~~DrpGLl~~i~~~l~~~glnI~~a 139 (419)
........-+...|.|.+... -.+|.+....++.+|.+.
T Consensus 105 ~~~~~~v~REl~LiKV~~~~~---r~ei~~i~~~fra~ivDv 143 (193)
T 2fgc_A 105 PLPENRVEREMALIKVRFDED---KQEIFQLVEIFRGKIIDV 143 (193)
T ss_dssp SSGGGEEEEEEEEEEEECSSC---HHHHHHHHHHTTCEEEEE
T ss_pred CCCCccceeEEEEEEEeCCcC---HHHHHHHHHHcCCEEEEE
Confidence 000001122456777766443 667777777777777743
No 46
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=94.83 E-value=0.068 Score=48.40 Aligned_cols=60 Identities=18% Similarity=0.188 Sum_probs=42.8
Q ss_pred cEEEEEEcCCCCChHHHHHHHHHhCCceEEEEEeee------cCcEEEEEEEEecCCCCcccHHHHHHHHHh
Q 014754 20 PHVITVNCPDKTGLGCDICRIILDFGLYITKGDIST------DGIWCYIVLWVVPHSSSIIRWTNLKNRLML 85 (419)
Q Consensus 20 ~~~v~V~~~DrpgL~~~i~~~l~~~~lnI~~A~i~t------dG~~~~d~f~V~~~~g~~~~~~~l~~~Le~ 85 (419)
...+.|.+.||||++++++.+|++++.||...+.++ +|. +.-.+.+.+. ..+.+.+.|++
T Consensus 4 ~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~-A~I~IEV~d~-----~Le~LL~kLrk 69 (223)
T 1y7p_A 4 LRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGK-ALIYFEIEGG-----DFEKILERVKT 69 (223)
T ss_dssp CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTE-EEEEEEECSS-----CHHHHHHHHHT
T ss_pred eEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCE-EEEEEEECCC-----CHHHHHHHHhC
Confidence 468899999999999999999999999999999886 344 3444666433 46667666665
No 47
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=94.47 E-value=0.18 Score=51.32 Aligned_cols=107 Identities=15% Similarity=0.137 Sum_probs=71.0
Q ss_pred CCeeEEEEEE---cCcchHHHHHHHHHHhCCeEEEEEEEeecCCCCeeEEEEEEecCCCcCCCHHHHHHHHHHHHHHh--
Q 014754 247 PAHTLLQIHC---VDHKGLLYDIMRTLKDCNMKISYGRFSPNSQGYRDLDLFIQQKDGKKIVDPEKQSAICSRLKMEM-- 321 (419)
Q Consensus 247 ~~~tvi~v~~---~DrpGLL~~i~~~l~~~g~~I~~a~i~t~t~g~~~~D~F~v~~~g~~~~d~~~~~~l~~~L~~~l-- 321 (419)
.+.+.|+|.+ .++||+++++..+|.+.|++|..-.-.+ ..... .|+++.+ ..++..+.|...+
T Consensus 316 ~~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~t--se~~I--s~~V~~~--------d~~~a~~~L~~~l~~ 383 (473)
T 3c1m_A 316 KNVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGS--SETNI--SLVVSEE--------DVDKALKALKREFGD 383 (473)
T ss_dssp EEEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECC--TTCCE--EEEEEGG--------GHHHHHHHHHHHHCC
T ss_pred CCeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecC--CCCEE--EEEEech--------HHHHHHHHHHHHHhh
Confidence 4678899997 6789999999999999999998766543 11222 3777531 1233444444444
Q ss_pred ------cCCc---eEEEecCCCCcccccceeEEEeeC---CCCccHHHHHHHHHHcCceEEEEE
Q 014754 322 ------LHPL---RVIIANRGPDTELLVANPVELCGK---GRPRVFYDVTLALKVLGICVFSAA 373 (419)
Q Consensus 322 ------~~~~---~v~i~~~~~~~~~~~~~~~~v~g~---DRpGil~~vt~~l~~~~v~I~~~~ 373 (419)
...+ .+.+.. .-..+.+.|. ++||+...+..+|++.||||....
T Consensus 384 ~~~~~~~~~~~~~~v~~~~--------~~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~mis 439 (473)
T 3c1m_A 384 FGKKSFLNNNLIRDVSVDK--------DVCVISVVGAGMRGAKGIAGKIFTAVSESGANIKMIA 439 (473)
T ss_dssp ----CTTSCCCEEEEEEEE--------EEEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCCEEE
T ss_pred hcccccccccccceEEEeC--------CcEEEEEEecCCCCChhHHHHHHHHHHHCCCCEEEEe
Confidence 3211 122110 0126888885 689999999999999999994443
No 48
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=94.46 E-value=0.075 Score=50.37 Aligned_cols=66 Identities=8% Similarity=0.113 Sum_probs=48.1
Q ss_pred eEEEeeCCCCccHHHHHHHHHHcCceEEEEEeeeeeccCceeeEEEEEEEcCCCCCCcchHHHHHHHHHHHH
Q 014754 343 PVELCGKGRPRVFYDVTLALKVLGICVFSAAIGRYSTSEREWEIYRFLLDENCKFQLSSMVAREQIVDRVRR 414 (419)
Q Consensus 343 ~~~v~g~DRpGil~~vt~~l~~~~v~I~~~~~~t~~~~~~~~~~~~f~~~d~~g~~~~~~~~~~~~~~~~~~ 414 (419)
.+-+.-.|+||-|+++...|+.+|||+.+++++. ..+.. -.+.||+ |.+|..-+ +.. +..++.|+.
T Consensus 202 sl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP--~~~~~-~~Y~Ffv-D~eg~~~d-~~v-~~aL~~L~~ 267 (283)
T 2qmx_A 202 SIVFALPNEQGSLFRALATFALRGIDLTKIESRP--SRKKA-FEYLFYA-DFIGHRED-QNV-HNALENLRE 267 (283)
T ss_dssp EEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEE--CSSST-TEEEEEE-EEESCTTS-HHH-HHHHHHHHT
T ss_pred EEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeE--cCCCC-cceEEEE-EEecCCCc-HHH-HHHHHHHHH
Confidence 4444446999999999999999999999999986 33443 5799999 77886544 333 444455543
No 49
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=94.18 E-value=0.1 Score=50.21 Aligned_cols=67 Identities=10% Similarity=0.078 Sum_probs=48.4
Q ss_pred eEEEeeC-CCCccHHHHHHHHHHcCceEEEEEeeeeeccCceeeEEEEEEEcCCCCCCcchHHHHHHHHHHHHH
Q 014754 343 PVELCGK-GRPRVFYDVTLALKVLGICVFSAAIGRYSTSEREWEIYRFLLDENCKFQLSSMVAREQIVDRVRRA 415 (419)
Q Consensus 343 ~~~v~g~-DRpGil~~vt~~l~~~~v~I~~~~~~t~~~~~~~~~~~~f~~~d~~g~~~~~~~~~~~~~~~~~~~ 415 (419)
++-+.-. |+||-|+++-..|+.+|||+.++++.. ..+.. -.|.||+ |.+|..-+ +.. +..++.|+..
T Consensus 203 Sl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP--~~~~~-~~Y~Ffi-D~eg~~~d-~~v-~~aL~~L~~~ 270 (313)
T 3mwb_A 203 TVVVPLPEDHPGALMEILDQFASRGVNLSRIESRP--TGQYL-GHYFFSI-DADGHATD-SRV-ADALAGLHRI 270 (313)
T ss_dssp EEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEE--CSSST-TSEEEEE-EEESCTTS-HHH-HHHHHHHHHH
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEee--cCCCC-ccEEEEE-EEeCCCCc-HHH-HHHHHHHHHh
Confidence 4445554 999999999999999999999999975 33443 5799999 77776533 333 4445555543
No 50
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=94.08 E-value=0.11 Score=50.38 Aligned_cols=59 Identities=12% Similarity=0.100 Sum_probs=44.8
Q ss_pred CCCccHHHHHHHHHHcCceEEEEEeeeeeccCceeeEEEEEEEcCCCCCCcchHHHHHHHHHHHH
Q 014754 350 GRPRVFYDVTLALKVLGICVFSAAIGRYSTSEREWEIYRFLLDENCKFQLSSMVAREQIVDRVRR 414 (419)
Q Consensus 350 DRpGil~~vt~~l~~~~v~I~~~~~~t~~~~~~~~~~~~f~~~d~~g~~~~~~~~~~~~~~~~~~ 414 (419)
|+||-|+++-..|+.+|||..++++.. ..+.. -.|.||+ |.+|..-+ +.. +..++.|+.
T Consensus 217 ~~pGaL~~~L~~Fa~~gINLtkIESRP--~~~~~-~~Y~Ffi-D~eg~~~d-~~v-~~AL~~L~~ 275 (329)
T 3luy_A 217 TGPGVLANLLDVFRDAGLNMTSFISRP--IKGRT-GTYSFIV-TLDAAPWE-ERF-RDALVEIAE 275 (329)
T ss_dssp CSTTHHHHHHHHHHHTTCCEEEEEEEE--ETTEE-EEEEEEE-EESSCTTS-HHH-HHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHCCcceEEEEeeE--CCCCC-ccEEEEE-EEeCCcCC-HHH-HHHHHHHHH
Confidence 799999999999999999999999985 44444 6899998 88886544 333 334444443
No 51
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=93.96 E-value=0.11 Score=48.73 Aligned_cols=66 Identities=9% Similarity=0.149 Sum_probs=47.7
Q ss_pred eEEEee---CCCCccHHHHHHHHHHcCceEEEEEeeeeeccCceeeEEEEEEEcCCCCCCcchHHHHHHHHHHHHH
Q 014754 343 PVELCG---KGRPRVFYDVTLALKVLGICVFSAAIGRYSTSEREWEIYRFLLDENCKFQLSSMVAREQIVDRVRRA 415 (419)
Q Consensus 343 ~~~v~g---~DRpGil~~vt~~l~~~~v~I~~~~~~t~~~~~~~~~~~~f~~~d~~g~~~~~~~~~~~~~~~~~~~ 415 (419)
.+-+.- .|+||-|+++...|+.+|||+.+++++. ..+.. -.+.||+ |.+ -+.++.. ++.++.|+..
T Consensus 188 sl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP--~~~~~-~~Y~Ffi-D~e--~~~d~~v-~~aL~~L~~~ 256 (267)
T 2qmw_A 188 SLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRP--LKTQL-GMYRFFV-QAD--SAITTDI-KKVIAILETL 256 (267)
T ss_dssp EEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEE--CSSST-TCEEEEE-EES--CCSCHHH-HHHHHHHHHT
T ss_pred EEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEee--cCCCC-ccEEEEE-EEe--cCCcHHH-HHHHHHHHHh
Confidence 444555 7999999999999999999999999986 33333 5799999 666 3443333 4455555543
No 52
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=93.41 E-value=0.43 Score=45.16 Aligned_cols=55 Identities=16% Similarity=0.156 Sum_probs=42.1
Q ss_pred CeeEEEEEEcCcchHHHHHHHHHHhCCeEEEEEEEeecCCCCeeEEEEEEecCCCc
Q 014754 248 AHTLLQIHCVDHKGLLYDIMRTLKDCNMKISYGRFSPNSQGYRDLDLFIQQKDGKK 303 (419)
Q Consensus 248 ~~tvi~v~~~DrpGLL~~i~~~l~~~g~~I~~a~i~t~t~g~~~~D~F~v~~~g~~ 303 (419)
..|.|-+.-+|+||-|+++...|+.+|+|+.+-.-.- +.+....-.||+|.+|..
T Consensus 199 ~ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP-~~~~~~~Y~FfvD~eg~~ 253 (283)
T 2qmx_A 199 QKTSIVFALPNEQGSLFRALATFALRGIDLTKIESRP-SRKKAFEYLFYADFIGHR 253 (283)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEE-CSSSTTEEEEEEEEESCT
T ss_pred ceEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeE-cCCCCcceEEEEEEecCC
Confidence 3566666678999999999999999999998766553 234444556899988864
No 53
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=92.43 E-value=0.73 Score=46.44 Aligned_cols=110 Identities=14% Similarity=0.070 Sum_probs=72.3
Q ss_pred CCeeEEEEEE---cCcchHHHHHHHHHHhCCeEEEEEEEeecCCCCeeEEEEEEecCCCcCCCHHHHHHHHHHHHHHhcC
Q 014754 247 PAHTLLQIHC---VDHKGLLYDIMRTLKDCNMKISYGRFSPNSQGYRDLDLFIQQKDGKKIVDPEKQSAICSRLKMEMLH 323 (419)
Q Consensus 247 ~~~tvi~v~~---~DrpGLL~~i~~~l~~~g~~I~~a~i~t~t~g~~~~D~F~v~~~g~~~~d~~~~~~l~~~L~~~l~~ 323 (419)
.+.+.|+|.+ .+.||++++|..+|.++|++|..-.-+ -... .|.++.+. +. ...+++.+.|...+.
T Consensus 296 ~~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i~~~----~~~i--s~~V~~~d--~~--~~~~~~~~el~~~~~- 364 (446)
T 3tvi_A 296 KNFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHMPSG----VDSV--SLVIEDCK--LD--GKCDKIIEEIKKQCN- 364 (446)
T ss_dssp EEEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEBCEE----TTEE--EEEEEHHH--HT--TTHHHHHHHHHHHSC-
T ss_pred CCEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEEecC----CCEE--EEEEecch--HH--HHHHHHHHHHHHhcC-
Confidence 3567899987 589999999999999999999754211 1222 37774311 00 023444445544432
Q ss_pred CceEEEecCCCCcccccceeEEEeeC---CCCccHHHHHHHHHHcCceEEEEEee
Q 014754 324 PLRVIIANRGPDTELLVANPVELCGK---GRPRVFYDVTLALKVLGICVFSAAIG 375 (419)
Q Consensus 324 ~~~v~i~~~~~~~~~~~~~~~~v~g~---DRpGil~~vt~~l~~~~v~I~~~~~~ 375 (419)
.-.+.+... -..+.++|. .+||+...+..+|++.||||....-.
T Consensus 365 ~~~v~v~~~--------vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIsqg 411 (446)
T 3tvi_A 365 PDSIEIHPN--------MALVATVGTGMAKTKGIANKIFTALSKENVNIRMIDQG 411 (446)
T ss_dssp CSEEEEEEE--------EEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCcEEEeCC--------eEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEEec
Confidence 122332111 237888886 58999999999999999999887733
No 54
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=91.79 E-value=1.2 Score=42.91 Aligned_cols=53 Identities=15% Similarity=0.197 Sum_probs=37.6
Q ss_pred eEEEEEEc--CcchHHHHHHHHHHhCCeEEEEEEEeecCCCCeeEEEEEEecCCCc
Q 014754 250 TLLQIHCV--DHKGLLYDIMRTLKDCNMKISYGRFSPNSQGYRDLDLFIQQKDGKK 303 (419)
Q Consensus 250 tvi~v~~~--DrpGLL~~i~~~l~~~g~~I~~a~i~t~t~g~~~~D~F~v~~~g~~ 303 (419)
+.+-+... |+||-|+++...|+.+|+|+.+-.-.- +.+....-+||+|.+|..
T Consensus 207 ts~i~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP-~~~~~~~Y~FfiD~eg~~ 261 (329)
T 3luy_A 207 ESVLTLIPLVTGPGVLANLLDVFRDAGLNMTSFISRP-IKGRTGTYSFIVTLDAAP 261 (329)
T ss_dssp EEEEEEECSCCSTTHHHHHHHHHHHTTCCEEEEEEEE-ETTEEEEEEEEEEESSCT
T ss_pred eEEEEEecCCCCCCHHHHHHHHHHHCCcceEEEEeeE-CCCCCccEEEEEEEeCCc
Confidence 33334444 799999999999999999997665543 134333446788998864
No 55
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=91.12 E-value=0.61 Score=48.04 Aligned_cols=62 Identities=11% Similarity=0.173 Sum_probs=48.0
Q ss_pred eeEEEeeCCCCccHHHHHHHHHHcCceEEEEEeeeeeccCceeeEEEEEEEcCCCCCCcchHHHHHHHHHHHH
Q 014754 342 NPVELCGKGRPRVFYDVTLALKVLGICVFSAAIGRYSTSEREWEIYRFLLDENCKFQLSSMVAREQIVDRVRR 414 (419)
Q Consensus 342 ~~~~v~g~DRpGil~~vt~~l~~~~v~I~~~~~~t~~~~~~~~~~~~f~~~d~~g~~~~~~~~~~~~~~~~~~ 414 (419)
+.+-+.-.|+||++..|+..|.++||||..+.+.+...++. +...+.++++ +. +.+++.|++
T Consensus 455 ~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~--a~~~i~vd~~----~~-----~~~l~~l~~ 516 (529)
T 1ygy_A 455 INLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPG--ATILLRLDQD----VP-----DDVRTAIAA 516 (529)
T ss_dssp EEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSC--EEEEEEESSC----CC-----HHHHHHHHH
T ss_pred cEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCE--EEEEEEECCC----CC-----HHHHHHHhc
Confidence 35666678999999999999999999999999987545444 8888888443 55 556666654
No 56
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=90.82 E-value=6.8 Score=39.56 Aligned_cols=114 Identities=15% Similarity=0.215 Sum_probs=71.2
Q ss_pred CeEEEEEEe---cCcccHHHHHHHHHHhCCceEEEEEEEeecCCeEEEEEEEEcCCCCCCCHHHHHHHHHHHHHHHcccc
Q 014754 107 PVYLLKLFC---LDRKGLLHDVTQVLCELELSIQRVKVTTTPDGRVLDLFFITDNRELLHTKKRQDETCEQLHAVLGESC 183 (419)
Q Consensus 107 ~~~~i~v~~---~DrpGLl~~i~~~l~~~glnI~~a~i~T~~~~~~~d~F~V~~~~g~~~~~~~~~~l~~~L~~~l~~~~ 183 (419)
+...|+|.+ .++||+++++..+|+++|+||.-....|. . .--.|.|... ..++..+.|.+.+-+..
T Consensus 317 ~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~ts--e-~~Is~~V~~~--------d~~~a~~~L~~~l~~~~ 385 (473)
T 3c1m_A 317 NVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSS--E-TNISLVVSEE--------DVDKALKALKREFGDFG 385 (473)
T ss_dssp EEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCT--T-CCEEEEEEGG--------GHHHHHHHHHHHHCC--
T ss_pred CeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCC--C-CEEEEEEech--------HHHHHHHHHHHHHhhhc
Confidence 467788886 67889999999999999999985544332 2 2244666532 12334444444441000
Q ss_pred cccccccCCCccccCCCcCCCcHHHHHHhhhhccchhhhhhhccCCCccCCCccEEEEeCCCCCCeeEEEEEEcC---cc
Q 014754 184 ISCELQLAGPECDCHQGVTSLSPVVAEELFRFELSDKETRLQALSPDMTKLKKANVVVDNSLSPAHTLLQIHCVD---HK 260 (419)
Q Consensus 184 ~~~~~~l~~~~~~~~~~~~~~~rrl~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~V~v~n~~~~~~tvi~v~~~D---rp 260 (419)
++ ++.. ...-..+.++ .+..++.|.|.. +|
T Consensus 386 ----------------------~~------------------~~~~---~~~~~~v~~~----~~~a~vsvVG~gm~~~~ 418 (473)
T 3c1m_A 386 ----------------------KK------------------SFLN---NNLIRDVSVD----KDVCVISVVGAGMRGAK 418 (473)
T ss_dssp ------------------------------------------CTTS---CCCEEEEEEE----EEEEEEEEECTTTTTCT
T ss_pred ----------------------cc------------------cccc---ccccceEEEe----CCcEEEEEEecCCCCCh
Confidence 00 0000 0001234443 356789999865 89
Q ss_pred hHHHHHHHHHHhCCeEEE
Q 014754 261 GLLYDIMRTLKDCNMKIS 278 (419)
Q Consensus 261 GLL~~i~~~l~~~g~~I~ 278 (419)
|.+..+..+|.+.|+||.
T Consensus 419 Gvaak~f~aL~~~~InI~ 436 (473)
T 3c1m_A 419 GIAGKIFTAVSESGANIK 436 (473)
T ss_dssp THHHHHHHHHHHHTCCCC
T ss_pred hHHHHHHHHHHHCCCCEE
Confidence 999999999999999994
No 57
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=90.78 E-value=0.64 Score=44.56 Aligned_cols=56 Identities=21% Similarity=0.320 Sum_probs=41.6
Q ss_pred CCeeEEEEEEc-CcchHHHHHHHHHHhCCeEEEEEEEeecCCCCeeEEEEEEecCCCc
Q 014754 247 PAHTLLQIHCV-DHKGLLYDIMRTLKDCNMKISYGRFSPNSQGYRDLDLFIQQKDGKK 303 (419)
Q Consensus 247 ~~~tvi~v~~~-DrpGLL~~i~~~l~~~g~~I~~a~i~t~t~g~~~~D~F~v~~~g~~ 303 (419)
...|.|-+..+ |+||-|+++...|+.+|+|+.+-.-.- +.+.-..-+||+|.+|..
T Consensus 199 ~~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP-~~~~~~~Y~FfiD~eg~~ 255 (313)
T 3mwb_A 199 ADKTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRP-TGQYLGHYFFSIDADGHA 255 (313)
T ss_dssp SEEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEE-CSSSTTSEEEEEEEESCT
T ss_pred CCeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEee-cCCCCccEEEEEEEeCCC
Confidence 35677777775 999999999999999999997665543 133333445899988864
No 58
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=90.65 E-value=1.3 Score=44.68 Aligned_cols=108 Identities=14% Similarity=0.206 Sum_probs=72.1
Q ss_pred CcEEEEEEc---CCCCChHHHHHHHHHhCCceEEEEEeeecCcEEEEEEEEecCCCCcccHHHHHHHHHhhCCCCCcccc
Q 014754 19 EPHVITVNC---PDKTGLGCDICRIILDFGLYITKGDISTDGIWCYIVLWVVPHSSSIIRWTNLKNRLMLECPSCSVSFY 95 (419)
Q Consensus 19 ~~~~v~V~~---~DrpgL~~~i~~~l~~~~lnI~~A~i~tdG~~~~d~f~V~~~~g~~~~~~~l~~~Le~~L~~~~~~~~ 95 (419)
+.+.|+|.+ ++.||..++|..+|+++|+||.-. .+ |.. -..|.|...+-. ...+++.+.|+..+.... .
T Consensus 297 ~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i--~~-~~~-~is~~V~~~d~~-~~~~~~~~el~~~~~~~~--v- 368 (446)
T 3tvi_A 297 NFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHM--PS-GVD-SVSLVIEDCKLD-GKCDKIIEEIKKQCNPDS--I- 368 (446)
T ss_dssp EEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEB--CE-ETT-EEEEEEEHHHHT-TTHHHHHHHHHHHSCCSE--E-
T ss_pred CEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEE--ec-CCC-EEEEEEecchHH-HHHHHHHHHHHHhcCCCc--E-
Confidence 345677775 699999999999999999998632 22 222 245666433210 023455566666553211 0
Q ss_pred cccCCCCCCCCCeEEEEEEec---CcccHHHHHHHHHHhCCceEEEEEE
Q 014754 96 FNQLSTRPTCSPVYLLKLFCL---DRKGLLHDVTQVLCELELSIQRVKV 141 (419)
Q Consensus 96 ~~~~~~~~~~~~~~~i~v~~~---DrpGLl~~i~~~l~~~glnI~~a~i 141 (419)
........|.|+|. ..||+.+++..+|++.|+||.-..-
T Consensus 369 -------~v~~~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIsq 410 (446)
T 3tvi_A 369 -------EIHPNMALVATVGTGMAKTKGIANKIFTALSKENVNIRMIDQ 410 (446)
T ss_dssp -------EEEEEEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEEE
T ss_pred -------EEeCCeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEEe
Confidence 11235778999986 5899999999999999999985443
No 59
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=90.43 E-value=0.76 Score=45.70 Aligned_cols=50 Identities=16% Similarity=0.116 Sum_probs=43.4
Q ss_pred CeEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeecCCeEEEEEEEEc
Q 014754 107 PVYLLKLFCLDRKGLLHDVTQVLCELELSIQRVKVTTTPDGRVLDLFFITD 157 (419)
Q Consensus 107 ~~~~i~v~~~DrpGLl~~i~~~l~~~glnI~~a~i~T~~~~~~~d~F~V~~ 157 (419)
....|.+.-.|+||.+..|+.+|+++|+||......+ .++.++-++-+..
T Consensus 330 ~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r-~g~~A~~vidvD~ 379 (404)
T 1sc6_A 330 GGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQT-SAQMGYVVIDIEA 379 (404)
T ss_dssp SSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEE-CSSEEEEEEEEEC
T ss_pred CcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccC-CCCEEEEEEEcCC
Confidence 4556888899999999999999999999999999986 7888877777753
No 60
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=89.74 E-value=1.1 Score=41.82 Aligned_cols=53 Identities=25% Similarity=0.276 Sum_probs=40.4
Q ss_pred CCeeEEEEEE---cCcchHHHHHHHHHHhCCeEEEEEEEeecCCCCeeEEEEEEecC
Q 014754 247 PAHTLLQIHC---VDHKGLLYDIMRTLKDCNMKISYGRFSPNSQGYRDLDLFIQQKD 300 (419)
Q Consensus 247 ~~~tvi~v~~---~DrpGLL~~i~~~l~~~g~~I~~a~i~t~t~g~~~~D~F~v~~~ 300 (419)
...|.|-+.. +|+||-|+++...|+.+|+|+.+-.-.- +.+....-.||+|.+
T Consensus 184 ~~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP-~~~~~~~Y~FfiD~e 239 (267)
T 2qmw_A 184 QNATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRP-LKTQLGMYRFFVQAD 239 (267)
T ss_dssp SSCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEE-CSSSTTCEEEEEEES
T ss_pred CCeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEee-cCCCCccEEEEEEEe
Confidence 3556777777 8999999999999999999998766553 234334456899887
No 61
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=89.28 E-value=1.4 Score=45.23 Aligned_cols=66 Identities=23% Similarity=0.269 Sum_probs=48.1
Q ss_pred CCCeeEEEEEEcCcchHHHHHHHHHHhCCeEEEEEEEeecCCCCeeEEEEEEecCCCcCCCHHHHHHHHH
Q 014754 246 SPAHTLLQIHCVDHKGLLYDIMRTLKDCNMKISYGRFSPNSQGYRDLDLFIQQKDGKKIVDPEKQSAICS 315 (419)
Q Consensus 246 ~~~~tvi~v~~~DrpGLL~~i~~~l~~~g~~I~~a~i~t~t~g~~~~D~F~v~~~g~~~~d~~~~~~l~~ 315 (419)
.+.+..+-+.-.|+||.+..++..|.++|+||...++.+...|+.+.-++-+|. +++ ++.+++|++
T Consensus 451 ~~~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd~---~~~-~~~l~~l~~ 516 (529)
T 1ygy_A 451 RAQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQ---DVP-DDVRTAIAA 516 (529)
T ss_dssp ESCSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESS---CCC-HHHHHHHHH
T ss_pred cCCccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEECC---CCC-HHHHHHHhc
Confidence 455778889999999999999999999999999999997434555553333332 334 455566653
No 62
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=88.02 E-value=1.2 Score=45.57 Aligned_cols=109 Identities=12% Similarity=0.085 Sum_probs=71.0
Q ss_pred CCeeEEEEEE---cCcchHHHHHHHHHHhCCeEEEEEEEeecCCCCeeEEEEEEecCC-CcCC-CHHHHHHHHHHHHHHh
Q 014754 247 PAHTLLQIHC---VDHKGLLYDIMRTLKDCNMKISYGRFSPNSQGYRDLDLFIQQKDG-KKIV-DPEKQSAICSRLKMEM 321 (419)
Q Consensus 247 ~~~tvi~v~~---~DrpGLL~~i~~~l~~~g~~I~~a~i~t~t~g~~~~D~F~v~~~g-~~~~-d~~~~~~l~~~L~~~l 321 (419)
.+.+.|+|.+ .++||++++|..+|.++|++|..-.-+ -..+ .|+++.+. .+.. ..+.++++. ..+
T Consensus 339 ~~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I~ss----e~si--s~~v~~~~~~~~~~~~~~l~~~~----~el 408 (510)
T 2cdq_A 339 RNVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVATS----EVSI--SLTLDPSKLWSRELIQQELDHVV----EEL 408 (510)
T ss_dssp EEEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEEEE----TTEE--EEEECCGGGSSSCCCHHHHHHHH----HHH
T ss_pred CCeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEEEeC----CCeE--EEEEechHhhhhhHHHHHHHHHH----HHh
Confidence 3578899987 679999999999999999999877322 1222 37774321 1110 112333333 333
Q ss_pred cCCceEEEecCCCCcccccceeEEEeeC--CCCccHHHHHHHHHHcCceEEEEE
Q 014754 322 LHPLRVIIANRGPDTELLVANPVELCGK--GRPRVFYDVTLALKVLGICVFSAA 373 (419)
Q Consensus 322 ~~~~~v~i~~~~~~~~~~~~~~~~v~g~--DRpGil~~vt~~l~~~~v~I~~~~ 373 (419)
...-.+.+... -..+.+.|. .+||+...+..+|++.||||.-..
T Consensus 409 ~~~~~v~~~~~--------~a~VsiVG~m~~~~Gvaa~~f~aL~~~~InI~mIs 454 (510)
T 2cdq_A 409 EKIAVVNLLKG--------RAIISLIGNVQHSSLILERAFHVLYTKGVNVQMIS 454 (510)
T ss_dssp TTTSEEEEEEE--------EEEEEEEECGGGHHHHHHHHHHHHHHHTCCCSEEE
T ss_pred CCCCeEEEeCC--------cEEEEEEEECCCChhHHHHHHHHHHHCCCCEEEEE
Confidence 33223333211 127888887 779999999999999999998776
No 63
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=87.27 E-value=1.7 Score=43.11 Aligned_cols=64 Identities=11% Similarity=0.101 Sum_probs=48.1
Q ss_pred CcEEEEEEcCCCCChHHHHHHHHHhCCceEEEEEeeecCcEEEEEEEEecCCCCcccHHHHHHHHHh
Q 014754 19 EPHVITVNCPDKTGLGCDICRIILDFGLYITKGDISTDGIWCYIVLWVVPHSSSIIRWTNLKNRLML 85 (419)
Q Consensus 19 ~~~~v~V~~~DrpgL~~~i~~~l~~~~lnI~~A~i~tdG~~~~d~f~V~~~~g~~~~~~~l~~~Le~ 85 (419)
+...+.+.-.|+||.+.+|+.+|+++|+||...+..+.|..++-++.|..+. + -.+.+.+.|++
T Consensus 330 ~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidvD~~~--~-~~~~~l~~l~~ 393 (404)
T 1sc6_A 330 GGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIEADE--D-VAEKALQAMKA 393 (404)
T ss_dssp SSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEEECCH--H-HHHHHHHHHHT
T ss_pred CcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEcCCCC--C-CCHHHHHHHhc
Confidence 4567889999999999999999999999999999988776666666663321 0 12344455654
No 64
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=86.86 E-value=0.88 Score=38.77 Aligned_cols=99 Identities=12% Similarity=0.054 Sum_probs=62.9
Q ss_pred CeeEEEEEEc---CcchHHHHHHHHHHhCCeEEEEEEEeecCCCCeeEEEEEEecCCCcCCCHHHHHHHHHHHHHHhcCC
Q 014754 248 AHTLLQIHCV---DHKGLLYDIMRTLKDCNMKISYGRFSPNSQGYRDLDLFIQQKDGKKIVDPEKQSAICSRLKMEMLHP 324 (419)
Q Consensus 248 ~~tvi~v~~~---DrpGLL~~i~~~l~~~g~~I~~a~i~t~t~g~~~~D~F~v~~~g~~~~d~~~~~~l~~~L~~~l~~~ 324 (419)
+.+.|+|.+. |+||.++++..+|++.|++|..-..+ .... .|+++... ..+++.+.| ...
T Consensus 17 ~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~~s----~~~I--sf~v~~~~-------~~~~il~~l----~~~ 79 (157)
T 3mah_A 17 GITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVATS----EVGV--SLTIDNDK-------NLPDIVRAL----SDI 79 (157)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEECC----SSEE--EEEESCCT-------THHHHHHHH----TTT
T ss_pred CEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEEec----CCEE--EEEECChH-------HHHHHHHHH----hcc
Confidence 5678888864 78999999999999999999655422 1222 37775311 233333333 222
Q ss_pred ceEEEecCCCCcccccceeEEEeeC---CCCccHHHHHHHHHHcCceEEEEE
Q 014754 325 LRVIIANRGPDTELLVANPVELCGK---GRPRVFYDVTLALKVLGICVFSAA 373 (419)
Q Consensus 325 ~~v~i~~~~~~~~~~~~~~~~v~g~---DRpGil~~vt~~l~~~~v~I~~~~ 373 (419)
..+.+... -..+.+.|. ++||+...+..+|+ |+||....
T Consensus 80 ~~v~~~~~--------~a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~is 121 (157)
T 3mah_A 80 GDVTVDKD--------MVIICIVGDMEWDNVGFEARIINALK--GVPVRMIS 121 (157)
T ss_dssp EEEEEEEE--------EEEEEEEC------CCHHHHHHHTTT--TSCCSEEE
T ss_pred CeEEEeCC--------eEEEEEECCCcccCccHHHHHHHHhC--CCCeEEEe
Confidence 22332111 237788885 68999999999998 89887766
No 65
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=86.40 E-value=0.73 Score=45.86 Aligned_cols=67 Identities=10% Similarity=0.034 Sum_probs=49.3
Q ss_pred eeEEEeeCCCCccHHHHHHHHHHcCceEEEEEeeeeeccCceeeEEEEEEEcCCCCCCcchHHHHHHHHHHHHH
Q 014754 342 NPVELCGKGRPRVFYDVTLALKVLGICVFSAAIGRYSTSEREWEIYRFLLDENCKFQLSSMVAREQIVDRVRRA 415 (419)
Q Consensus 342 ~~~~v~g~DRpGil~~vt~~l~~~~v~I~~~~~~t~~~~~~~~~~~~f~~~d~~g~~~~~~~~~~~~~~~~~~~ 415 (419)
+++-+.-.++||-|+++...|+.+|||+.++++.. ..+.. -.+.||| |.+ ...+ ..-+.+++.|+..
T Consensus 35 TSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRP--sk~~~-~eY~FfV-D~e--h~~d-~~v~~AL~eL~~~ 101 (429)
T 1phz_A 35 ISLIFSLKEEVGALAKVLRLFEENDINLTHIESRP--SRLNK-DEYEFFT-YLD--KRTK-PVLGSIIKSLRND 101 (429)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEE--CSSCT-TEEEEEE-CBC--GGGH-HHHHHHHHHHHHT
T ss_pred EEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeee--cCCCC-ccEEEEE-EEe--eCCC-HHHHHHHHHHHhh
Confidence 35555557899999999999999999999999975 33333 6899999 766 3332 3345666777665
No 66
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=85.71 E-value=2.4 Score=35.92 Aligned_cols=99 Identities=10% Similarity=0.001 Sum_probs=63.5
Q ss_pred CcEEEEEEc---CCCCChHHHHHHHHHhCCceEEEEEeeecCcEEEEEEEEecCCCCcccHHHHHHHHHhhCCCCCcccc
Q 014754 19 EPHVITVNC---PDKTGLGCDICRIILDFGLYITKGDISTDGIWCYIVLWVVPHSSSIIRWTNLKNRLMLECPSCSVSFY 95 (419)
Q Consensus 19 ~~~~v~V~~---~DrpgL~~~i~~~l~~~~lnI~~A~i~tdG~~~~d~f~V~~~~g~~~~~~~l~~~Le~~L~~~~~~~~ 95 (419)
+...|+|.+ ++.||..+++...|+++|+||.--. + +.. -.+|.|.+.+ ..+++.+.|.+ ....
T Consensus 17 ~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~--~-s~~-~Isf~v~~~~----~~~~il~~l~~-----~~~v- 82 (157)
T 3mah_A 17 GITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVA--T-SEV-GVSLTIDNDK----NLPDIVRALSD-----IGDV- 82 (157)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEE--C-CSS-EEEEEESCCT----THHHHHHHHTT-----TEEE-
T ss_pred CEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEE--e-cCC-EEEEEECChH----HHHHHHHHHhc-----cCeE-
Confidence 567888874 6889999999999999999985322 2 221 2466664322 34444344432 1100
Q ss_pred cccCCCCCCCCCeEEEEEEec---CcccHHHHHHHHHHhCCceEEEEE
Q 014754 96 FNQLSTRPTCSPVYLLKLFCL---DRKGLLHDVTQVLCELELSIQRVK 140 (419)
Q Consensus 96 ~~~~~~~~~~~~~~~i~v~~~---DrpGLl~~i~~~l~~~glnI~~a~ 140 (419)
....+...|.|+|. +.||+.+++..+|+ |+||.-..
T Consensus 83 -------~~~~~~a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~is 121 (157)
T 3mah_A 83 -------TVDKDMVIICIVGDMEWDNVGFEARIINALK--GVPVRMIS 121 (157)
T ss_dssp -------EEEEEEEEEEEEC------CCHHHHHHHTTT--TSCCSEEE
T ss_pred -------EEeCCeEEEEEECCCcccCccHHHHHHHHhC--CCCeEEEe
Confidence 11124677888875 68999999999999 99998543
No 67
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=85.43 E-value=2.7 Score=41.90 Aligned_cols=49 Identities=14% Similarity=0.160 Sum_probs=41.3
Q ss_pred CCcEEEEEEcCCCCChHHHHHHHHHhCCceEEEEEeeecCcEEEEEEEE
Q 014754 18 GEPHVITVNCPDKTGLGCDICRIILDFGLYITKGDISTDGIWCYIVLWV 66 (419)
Q Consensus 18 ~~~~~v~V~~~DrpgL~~~i~~~l~~~~lnI~~A~i~tdG~~~~d~f~V 66 (419)
.+...|++.-+|.||.+.+|..+|+++|+||.+-...+.|.++.-+.-|
T Consensus 341 ~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~~~~~y~~~d~ 389 (416)
T 3k5p_A 341 PTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEA 389 (416)
T ss_dssp SSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEE
T ss_pred CCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCCCceEEEEEEe
Confidence 3578999999999999999999999999999987777877765444444
No 68
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=83.07 E-value=3.5 Score=40.99 Aligned_cols=49 Identities=12% Similarity=0.072 Sum_probs=41.4
Q ss_pred CCeEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeecCCeEEEEEEE
Q 014754 106 SPVYLLKLFCLDRKGLLHDVTQVLCELELSIQRVKVTTTPDGRVLDLFFI 155 (419)
Q Consensus 106 ~~~~~i~v~~~DrpGLl~~i~~~l~~~glnI~~a~i~T~~~~~~~d~F~V 155 (419)
+....|.+.-.|.||.+..|..+|+++|+||..-...| .++.+.-+.-|
T Consensus 341 ~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~-~~~~~y~~~d~ 389 (416)
T 3k5p_A 341 PTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQT-DGEVGYLVMEA 389 (416)
T ss_dssp SSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEE-CSSCEEEEEEE
T ss_pred CCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccC-CCceEEEEEEe
Confidence 35789999999999999999999999999999887775 67777555544
No 69
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=79.58 E-value=3.7 Score=41.21 Aligned_cols=67 Identities=18% Similarity=0.161 Sum_probs=42.3
Q ss_pred cceeEEEeeCCCCccHHHHHHHHHHcCceEEEEEeeeeeccCceeeEEEEEEEcCCCCCCcchHHHHHHHHHHH
Q 014754 340 VANPVELCGKGRPRVFYDVTLALKVLGICVFSAAIGRYSTSEREWEIYRFLLDENCKFQLSSMVAREQIVDRVR 413 (419)
Q Consensus 340 ~~~~~~v~g~DRpGil~~vt~~l~~~~v~I~~~~~~t~~~~~~~~~~~~f~~~d~~g~~~~~~~~~~~~~~~~~ 413 (419)
..+.+-+...|+||++.+|+.+|.++||+|.++--.....++. .+....+++. ..++.-+..++.|+
T Consensus 358 ~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~--~~~~v~~th~-----~~e~~~~~~~~~~~ 424 (444)
T 3mtj_A 358 TAYYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEE--QVDIILLTHV-----TLEKNVNAAIAKIE 424 (444)
T ss_dssp EEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC--------CEEEEEEECS-----EEHHHHHHHHHHHT
T ss_pred eeeEEEEEecCcccHHHHHHHHHHhcCCceeEEeecccccCCC--CceEEEEecc-----CCHHHHHHHHHHHh
Confidence 3567888999999999999999999999998865321100111 2455566553 23444455555544
No 70
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=78.22 E-value=11 Score=38.49 Aligned_cols=110 Identities=17% Similarity=0.160 Sum_probs=67.8
Q ss_pred CeEEEEEEe---cCcccHHHHHHHHHHhCCceEEEEEEEeecCCeEEEEEEEEcCCCCCCCHHHHHHHHHHHHHHHcccc
Q 014754 107 PVYLLKLFC---LDRKGLLHDVTQVLCELELSIQRVKVTTTPDGRVLDLFFITDNRELLHTKKRQDETCEQLHAVLGESC 183 (419)
Q Consensus 107 ~~~~i~v~~---~DrpGLl~~i~~~l~~~glnI~~a~i~T~~~~~~~d~F~V~~~~g~~~~~~~~~~l~~~L~~~l~~~~ 183 (419)
..+.|+|.+ .++||++++|..+|+++|+||.-. .|... --.|.|........+. +++.|...+..-
T Consensus 340 ~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I--~sse~---sis~~v~~~~~~~~~~-----~~~~l~~~~~el- 408 (510)
T 2cdq_A 340 NVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVV--ATSEV---SISLTLDPSKLWSREL-----IQQELDHVVEEL- 408 (510)
T ss_dssp EEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEE--EEETT---EEEEEECCGGGSSSCC-----CHHHHHHHHHHH-
T ss_pred CeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEE--EeCCC---eEEEEEechHhhhhhH-----HHHHHHHHHHHh-
Confidence 467788885 679999999999999999999954 33322 1345554322110000 111222221100
Q ss_pred cccccccCCCccccCCCcCCCcHHHHHHhhhhccchhhhhhhccCCCccCCCccEEEEeCCCCCCeeEEEEEEc--Ccch
Q 014754 184 ISCELQLAGPECDCHQGVTSLSPVVAEELFRFELSDKETRLQALSPDMTKLKKANVVVDNSLSPAHTLLQIHCV--DHKG 261 (419)
Q Consensus 184 ~~~~~~l~~~~~~~~~~~~~~~rrl~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~V~v~n~~~~~~tvi~v~~~--DrpG 261 (419)
. .-..|.++ .+..+|.+.|. ..||
T Consensus 409 --------------------------------------------~------~~~~v~~~----~~~a~VsiVG~m~~~~G 434 (510)
T 2cdq_A 409 --------------------------------------------E------KIAVVNLL----KGRAIISLIGNVQHSSL 434 (510)
T ss_dssp --------------------------------------------T------TTSEEEEE----EEEEEEEEEECGGGHHH
T ss_pred --------------------------------------------C------CCCeEEEe----CCcEEEEEEEECCCChh
Confidence 0 00123443 24568888887 7899
Q ss_pred HHHHHHHHHHhCCeEEEEEE
Q 014754 262 LLYDIMRTLKDCNMKISYGR 281 (419)
Q Consensus 262 LL~~i~~~l~~~g~~I~~a~ 281 (419)
+...+..+|.+.|+||.--.
T Consensus 435 vaa~~f~aL~~~~InI~mIs 454 (510)
T 2cdq_A 435 ILERAFHVLYTKGVNVQMIS 454 (510)
T ss_dssp HHHHHHHHHHHHTCCCSEEE
T ss_pred HHHHHHHHHHHCCCCEEEEE
Confidence 99999999999999997643
No 71
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=73.48 E-value=4.6 Score=40.17 Aligned_cols=55 Identities=16% Similarity=0.180 Sum_probs=39.7
Q ss_pred CCCCeeEEEEEEcCcchHHHHHHHHHHhCCeEEEEEEEeecCCCCeeEEEEEEecC
Q 014754 245 LSPAHTLLQIHCVDHKGLLYDIMRTLKDCNMKISYGRFSPNSQGYRDLDLFIQQKD 300 (419)
Q Consensus 245 ~~~~~tvi~v~~~DrpGLL~~i~~~l~~~g~~I~~a~i~t~t~g~~~~D~F~v~~~ 300 (419)
+....|.|-+..+|+||-|+++...|+.+|+|+.+-.-.- +.+....=.|++|.+
T Consensus 30 tg~dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRP-sk~~~~eY~FfVD~e 84 (429)
T 1phz_A 30 NQNGAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRP-SRLNKDEYEFFTYLD 84 (429)
T ss_dssp CSSCCEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEE-CSSCTTEEEEEECBC
T ss_pred CCCCeEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeee-cCCCCccEEEEEEEe
Confidence 3345666777778999999999999999999996544432 133333445888876
No 72
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=72.38 E-value=6 Score=39.70 Aligned_cols=51 Identities=27% Similarity=0.542 Sum_probs=35.4
Q ss_pred CeEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeec-CCeEEEEEEEEc
Q 014754 107 PVYLLKLFCLDRKGLLHDVTQVLCELELSIQRVKVTTTP-DGRVLDLFFITD 157 (419)
Q Consensus 107 ~~~~i~v~~~DrpGLl~~i~~~l~~~glnI~~a~i~T~~-~~~~~d~F~V~~ 157 (419)
..+-+.+...|+||.|++|+++|.++|++|.+....-.. ++....+.+++.
T Consensus 358 ~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~~~~~v~~th 409 (444)
T 3mtj_A 358 TAYYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQVDIILLTH 409 (444)
T ss_dssp EEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC------CEEEEEEEC
T ss_pred eeeEEEEEecCcccHHHHHHHHHHhcCCceeEEeecccccCCCCceEEEEec
Confidence 466788889999999999999999999999976543111 111245566664
No 73
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=43.95 E-value=72 Score=26.21 Aligned_cols=44 Identities=20% Similarity=0.201 Sum_probs=32.9
Q ss_pred CeEEEEEEec---CcccHHHHHHHHHHhCCceEEEEEEEeecCCeEEEEEEEE
Q 014754 107 PVYLLKLFCL---DRKGLLHDVTQVLCELELSIQRVKVTTTPDGRVLDLFFIT 156 (419)
Q Consensus 107 ~~~~i~v~~~---DrpGLl~~i~~~l~~~glnI~~a~i~T~~~~~~~d~F~V~ 156 (419)
.+..|+|.++ |-.|+++.+++.|++.|+.|- -|+|... |-.+|.
T Consensus 61 ~wr~i~v~~~l~~~~vGilA~is~pLA~agIsif--~iSty~t----D~IlVp 107 (134)
T 1zhv_A 61 GWSCFKFQGPFAFDETGIVLSVISPLSTNGIGIF--VVSTFDG----DHLLVR 107 (134)
T ss_dssp EEEEEEECSCCCCSSCCHHHHHHHHHHTTTCCCE--EEECSSC----EEEEEE
T ss_pred CeEEEEEecCCCccHHHHHHHHHHHHHhCCCCeE--EEEeccc----cEEEEe
Confidence 3556666655 788999999999999999998 4555433 656665
No 74
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=40.28 E-value=76 Score=25.10 Aligned_cols=47 Identities=11% Similarity=0.091 Sum_probs=37.4
Q ss_pred CcEEEEEEcCCCCChHHHHHHHHHhC---CceEEEEEeeecCcEEEEEEEE
Q 014754 19 EPHVITVNCPDKTGLGCDICRIILDF---GLYITKGDISTDGIWCYIVLWV 66 (419)
Q Consensus 19 ~~~~v~V~~~DrpgL~~~i~~~l~~~---~lnI~~A~i~tdG~~~~d~f~V 66 (419)
....+.|.+++.+++...|..++..+ +..+ ..+-++.|.+.--.+.|
T Consensus 35 c~y~~KvIG~a~~~~~~~V~~vv~~~~p~d~~~-~~r~Ss~GkY~Svtv~v 84 (109)
T 1rwu_A 35 TPFTYKVMGQALPELVDQVVEVVQRHAPGDYTP-TVKPSSKGNYHSVSITI 84 (109)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHHHSSSCCCE-EEEESSCSSEEEEEEEE
T ss_pred CCceEEEEEECcHHHHHHHHHHHHHhCCCCCCc-eecCCCCCeEEEEEEEE
Confidence 35899999999999999999999988 7887 56778899863333333
No 75
>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=37.66 E-value=46 Score=25.91 Aligned_cols=45 Identities=20% Similarity=0.131 Sum_probs=30.8
Q ss_pred cHHHHHHHHHHcCceEEEEEeeeeeccCceeeEEEEEEEcCCCCCCc
Q 014754 354 VFYDVTLALKVLGICVFSAAIGRYSTSEREWEIYRFLLDENCKFQLS 400 (419)
Q Consensus 354 il~~vt~~l~~~~v~I~~~~~~t~~~~~~~~~~~~f~~~d~~g~~~~ 400 (419)
=+.++.+.|.+.|+.+...-.... .+..+....||+.||+|..+.
T Consensus 80 d~~~~~~~l~~~G~~~~~~p~~~~--~~~~~~~~~~~~~DPdGn~ie 124 (135)
T 3rri_A 80 HFDNLYKLAKQRGIPFYHDLSRRF--EGLIEEHETFFLIDPSNNLLE 124 (135)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEES--TTSTTCEEEEEEECTTCCEEE
T ss_pred hHHHHHHHHHHcCCceecCccccc--CCCCCceEEEEEECCCCCEEE
Confidence 467788999999999866544320 111113567999999998764
No 76
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=37.16 E-value=64 Score=26.47 Aligned_cols=45 Identities=22% Similarity=0.282 Sum_probs=33.2
Q ss_pred CCeEEEEEEe---cCcccHHHHHHHHHHhCCceEEEEEEEeecCCeEEEEEEEE
Q 014754 106 SPVYLLKLFC---LDRKGLLHDVTQVLCELELSIQRVKVTTTPDGRVLDLFFIT 156 (419)
Q Consensus 106 ~~~~~i~v~~---~DrpGLl~~i~~~l~~~glnI~~a~i~T~~~~~~~d~F~V~ 156 (419)
..+..|+|.+ .|-.|+++.+++.|++.|+.|. -+.|... |-.+|.
T Consensus 69 ~~wr~i~l~~~~~l~~vGi~a~is~~LA~agIsif--~iSty~t----DhIlVp 116 (133)
T 1zvp_A 69 ALFSLITLTVHSSLEAVGLTAAFATKLAEHGISAN--VIAGYYH----DHIFVQ 116 (133)
T ss_dssp SCEEEEEEECCC--CCSCHHHHHHHHHHHTTCCCE--EEECSSC----EEEEEE
T ss_pred CCeEEEEEeccCCccHHHHHHHHHHHHHhCCCCcE--EEEeccc----cEEEEe
Confidence 3456677665 6899999999999999999998 4554433 556665
No 77
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=35.19 E-value=14 Score=36.93 Aligned_cols=107 Identities=18% Similarity=0.172 Sum_probs=67.4
Q ss_pred CCeeEEEEEEc---CcchHHHHHHHHHHhCCeEEEEEEEeecCCCCeeEEEEEEecCCC-cCCCHHHHHHHHHHHHHHhc
Q 014754 247 PAHTLLQIHCV---DHKGLLYDIMRTLKDCNMKISYGRFSPNSQGYRDLDLFIQQKDGK-KIVDPEKQSAICSRLKMEML 322 (419)
Q Consensus 247 ~~~tvi~v~~~---DrpGLL~~i~~~l~~~g~~I~~a~i~t~t~g~~~~D~F~v~~~g~-~~~d~~~~~~l~~~L~~~l~ 322 (419)
.+.+.|+|.+. +.||++.+|..+|.++|++|..-.-+ .... .|.++.+.. .-.....++++...|.. +.
T Consensus 306 ~~~~~i~i~~~~m~~~~g~~~~if~~l~~~~i~vd~i~ss----~~si--s~~v~~~~~~~~~~~~~~~~~~~el~~-~~ 378 (449)
T 2j0w_A 306 RNQTLLTLHSLNMLHSRGFLAEVFGILARHNISVDLITTS----EVSV--ALTLDTTGSTSTGDTLLTQSLLMELSA-LC 378 (449)
T ss_dssp EEEEEEEECCCSCSCHHHHHHHHTTTTTTTTCCCSEEEEE----TTEE--EEEECCCCCSSTTCCSSCHHHHHHHHH-HS
T ss_pred CCEEEEEEEecCCCCccCHHHHHHHHHHHcCCCEEEEEeC----CCeE--EEEEeccccchhhHHHHHHHHHHHhcc-CC
Confidence 35678888875 68999999999999999999765522 2223 377753211 10001234556555543 21
Q ss_pred CCceEEEecCCCCcccccceeEEEeeC---CCCccHHHHHHHHHHcCceEEEEE
Q 014754 323 HPLRVIIANRGPDTELLVANPVELCGK---GRPRVFYDVTLALKVLGICVFSAA 373 (419)
Q Consensus 323 ~~~~v~i~~~~~~~~~~~~~~~~v~g~---DRpGil~~vt~~l~~~~v~I~~~~ 373 (419)
. +.+... -..+.+.|. .+||+...+..+|++ +||.-..
T Consensus 379 -~--v~~~~~--------~a~vsvVG~gm~~~~gv~~~~f~aL~~--ini~mIs 419 (449)
T 2j0w_A 379 -R--VEVEEG--------LALVALIGNDLSKACGVGKEVFGVLEP--FNIRMIC 419 (449)
T ss_dssp -C--EEEEEE--------EEEEEEEESSCTTSSSHHHHHHSSCTT--SCCCEEE
T ss_pred -e--EEEeCC--------eEEEEEECCCccccccHHHHHHHHHhC--CCeEEEE
Confidence 1 222111 127888886 689999999999965 7766554
No 78
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=32.45 E-value=1.8e+02 Score=22.84 Aligned_cols=63 Identities=11% Similarity=0.080 Sum_probs=43.8
Q ss_pred CCeeEEEEEEcCcchHHHHHHHHHHhC---CeEEEEEEEeecCCCCeeEEEEEEecCCCcCCCHHHHHHHHHHH
Q 014754 247 PAHTLLQIHCVDHKGLLYDIMRTLKDC---NMKISYGRFSPNSQGYRDLDLFIQQKDGKKIVDPEKQSAICSRL 317 (419)
Q Consensus 247 ~~~tvi~v~~~DrpGLL~~i~~~l~~~---g~~I~~a~i~t~t~g~~~~D~F~v~~~g~~~~d~~~~~~l~~~L 317 (419)
+-.+.+.|.|.+.+++...|..++..+ +..+ ..+-+ ..|.... +-+.. .+.++++++.|=++|
T Consensus 34 Pc~y~~KvIG~a~~~~~~~V~~vv~~~~p~d~~~-~~r~S--s~GkY~S--vtv~v---~v~S~eQv~aiY~~L 99 (109)
T 1rwu_A 34 PTPFTYKVMGQALPELVDQVVEVVQRHAPGDYTP-TVKPS--SKGNYHS--VSITI---NATHIEQVETLYEEL 99 (109)
T ss_dssp CCCEEEEEEEECCTTHHHHHHHHHHHHSSSCCCE-EEEES--SCSSEEE--EEEEE---CCSSHHHHHHHHHHH
T ss_pred CCCceEEEEEECcHHHHHHHHHHHHHhCCCCCCc-eecCC--CCCeEEE--EEEEE---EECCHHHHHHHHHHH
Confidence 346899999999999999999999988 6777 44666 3677444 22222 334466777665554
No 79
>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}
Probab=29.68 E-value=57 Score=26.07 Aligned_cols=44 Identities=11% Similarity=0.163 Sum_probs=30.5
Q ss_pred cHHHHHHHHHHcCceEEEEEeeeeeccCceeeEEEEEEEcCCCCCCc
Q 014754 354 VFYDVTLALKVLGICVFSAAIGRYSTSEREWEIYRFLLDENCKFQLS 400 (419)
Q Consensus 354 il~~vt~~l~~~~v~I~~~~~~t~~~~~~~~~~~~f~~~d~~g~~~~ 400 (419)
=+.++.+.|.+.|+.+....... .+... ....||+.||+|..+.
T Consensus 100 dl~~~~~~l~~~G~~~~~~p~~~--~~~~g-~~~~~~~~DPdGn~iE 143 (147)
T 3zw5_A 100 PLEEMIQHLKACDVPIEEGPVPR--TGAKG-PIMSIYFRDPDRNLIE 143 (147)
T ss_dssp CHHHHHHHHHHTTCCCCEEEEEE--EETTE-EEEEEEEECTTCCEEE
T ss_pred CHHHHHHHHHHcCCceeeCcccc--cCCCC-ceEEEEEECCCCCEEE
Confidence 46778889999999887554432 12211 3457899999998764
No 80
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=26.19 E-value=1.5e+02 Score=22.92 Aligned_cols=51 Identities=16% Similarity=0.139 Sum_probs=35.7
Q ss_pred CCeeEEEEEEcCcchHHHHHHHHHHhCCeE-EEEEEEeecCCCCeeEEEEEEecCCCcCC
Q 014754 247 PAHTLLQIHCVDHKGLLYDIMRTLKDCNMK-ISYGRFSPNSQGYRDLDLFIQQKDGKKIV 305 (419)
Q Consensus 247 ~~~tvi~v~~~DrpGLL~~i~~~l~~~g~~-I~~a~i~t~t~g~~~~D~F~v~~~g~~~~ 305 (419)
..++.+.+...| +..+.+.+.+.|+. +...-... ..|.+ .|+.|++|+.+.
T Consensus 65 ~~~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~~~-~~G~~---~~~~DPdGn~ie 116 (128)
T 3g12_A 65 IPSLQLGFQITD----LEKTVQELVKIPGAMCILDPTDM-PDGKK---AIVLDPDGHSIE 116 (128)
T ss_dssp CCSEEEEEEESC----HHHHHHHHTTSTTCEEEEEEEEC-C-CEE---EEEECTTCCEEE
T ss_pred CCceEEEEEeCC----HHHHHHHHHHCCCceeccCceeC-CCccE---EEEECCCCCEEE
Confidence 356778888888 88899999999999 76544442 23433 355599998653
No 81
>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*
Probab=25.84 E-value=77 Score=24.16 Aligned_cols=43 Identities=14% Similarity=0.246 Sum_probs=30.3
Q ss_pred HHHHHHHHHHcCceEEEEEeeeeeccCceeeEEEEEEEcCCCCCCc
Q 014754 355 FYDVTLALKVLGICVFSAAIGRYSTSEREWEIYRFLLDENCKFQLS 400 (419)
Q Consensus 355 l~~vt~~l~~~~v~I~~~~~~t~~~~~~~~~~~~f~~~d~~g~~~~ 400 (419)
+.++.+.|.++|+.+...-... .+... ....||+.||+|..+.
T Consensus 84 ~~~~~~~l~~~G~~~~~~~~~~--~~~~g-~~~~~~~~DPdG~~ie 126 (133)
T 3ey7_A 84 LSDAMKHVEDQGVTIMEGPVKR--TGAQG-AITSFYFRDPDGNLIE 126 (133)
T ss_dssp HHHHHHHHHHTTCCCCEEEEEE--EETTE-EEEEEEEECTTCCEEE
T ss_pred HHHHHHHHHHCCCccccCCccc--cCCCC-CeEEEEEECCCCCEEE
Confidence 7778899999999987654332 11111 3578999999998764
No 82
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=24.93 E-value=51 Score=27.15 Aligned_cols=32 Identities=19% Similarity=0.288 Sum_probs=26.3
Q ss_pred eEEEeeC---CCCccHHHHHHHHHHcCceEEEEEe
Q 014754 343 PVELCGK---GRPRVFYDVTLALKVLGICVFSAAI 374 (419)
Q Consensus 343 ~~~v~g~---DRpGil~~vt~~l~~~~v~I~~~~~ 374 (419)
.+.|.|. |-.|++..|+..|++.||+|+-...
T Consensus 64 ~i~v~~~l~~~~vGilA~is~pLA~agIsif~iSt 98 (134)
T 1zhv_A 64 CFKFQGPFAFDETGIVLSVISPLSTNGIGIFVVST 98 (134)
T ss_dssp EEEECSCCCCSSCCHHHHHHHHHHTTTCCCEEEEC
T ss_pred EEEEecCCCccHHHHHHHHHHHHHhCCCCeEEEEe
Confidence 3444444 8889999999999999999998873
No 83
>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A
Probab=22.07 E-value=88 Score=24.86 Aligned_cols=43 Identities=19% Similarity=0.264 Sum_probs=29.8
Q ss_pred HHHHHHHHHHcCceEEEEEeeeeeccCceeeEEEEEEEcCCCCCCc
Q 014754 355 FYDVTLALKVLGICVFSAAIGRYSTSEREWEIYRFLLDENCKFQLS 400 (419)
Q Consensus 355 l~~vt~~l~~~~v~I~~~~~~t~~~~~~~~~~~~f~~~d~~g~~~~ 400 (419)
+.++.+.|.+.|+.+...-... .++.. ....||+.||+|..+.
T Consensus 97 l~~~~~~l~~~G~~~~~~p~~~--~~~~g-~~~~~~~~DPdG~~iE 139 (152)
T 3huh_A 97 INDVVSEILQAGISIVEGPVER--TGATG-EIMSIYIRDPDGNLIE 139 (152)
T ss_dssp HHHHHHHHHHTTCCCSEEEEEE--EETTE-EEEEEEEECTTCCEEE
T ss_pred HHHHHHHHHHCCCeEecCCccc--cCCCC-cEEEEEEECCCCCEEE
Confidence 6778889999999877644332 11111 3577899999998764
No 84
>2dnr_A Synaptojanin-1; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.14 E-value=1.8e+02 Score=22.16 Aligned_cols=27 Identities=19% Similarity=0.340 Sum_probs=24.1
Q ss_pred ChHHHHHHHHHhCCceEEEEEeeecCcE
Q 014754 32 GLGCDICRIILDFGLYITKGDISTDGIW 59 (419)
Q Consensus 32 gL~~~i~~~l~~~~lnI~~A~i~tdG~~ 59 (419)
.|+..+-+.|+..| +|..+++..|-.|
T Consensus 27 ~l~~~L~~~F~~~G-~Vi~vr~~~d~~f 53 (91)
T 2dnr_A 27 ALIDELLQQFASFG-EVILIRFVEDKMW 53 (91)
T ss_dssp HHHHHHHHHHHTTC-CEEEEEECSSSEE
T ss_pred HHHHHHHHHHHhCC-CeEEEEEecCCEE
Confidence 68899999999999 8999999987764
Done!