Query 014755
Match_columns 419
No_of_seqs 784 out of 1603
Neff 11.9
Searched_HMMs 46136
Date Fri Mar 29 08:12:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014755.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014755hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0271 Notchless-like WD40 re 100.0 4.4E-58 9.4E-63 364.8 28.1 319 5-404 110-479 (480)
2 KOG0271 Notchless-like WD40 re 100.0 4.4E-52 9.6E-57 330.7 26.0 287 45-411 113-444 (480)
3 KOG0272 U4/U6 small nuclear ri 100.0 6.7E-50 1.5E-54 322.1 23.4 281 44-404 172-458 (459)
4 KOG0272 U4/U6 small nuclear ri 100.0 2.4E-48 5.2E-53 313.1 23.1 271 13-363 181-458 (459)
5 KOG0286 G-protein beta subunit 100.0 1.4E-44 3.1E-49 278.1 32.8 283 43-404 51-343 (343)
6 KOG4497 Uncharacterized conser 100.0 2.8E-45 6E-50 286.8 21.4 402 1-419 1-404 (447)
7 KOG0286 G-protein beta subunit 100.0 3.5E-43 7.5E-48 270.5 32.2 279 6-363 51-343 (343)
8 KOG0315 G-protein beta subunit 100.0 3E-43 6.6E-48 264.7 29.9 287 19-385 10-309 (311)
9 KOG0291 WD40-repeat-containing 100.0 4.9E-42 1.1E-46 295.9 41.5 367 10-411 99-555 (893)
10 KOG0315 G-protein beta subunit 100.0 2.6E-43 5.6E-48 265.1 27.1 280 60-414 11-296 (311)
11 KOG0279 G protein beta subunit 100.0 2.8E-42 6E-47 263.8 31.8 283 44-406 12-313 (315)
12 KOG0273 Beta-transducin family 100.0 1E-41 2.2E-46 278.7 30.4 312 13-406 184-523 (524)
13 KOG0318 WD40 repeat stress pro 100.0 2.5E-40 5.5E-45 274.2 36.9 322 6-406 189-602 (603)
14 KOG0296 Angio-associated migra 100.0 1.2E-40 2.5E-45 264.1 32.2 320 7-406 61-398 (399)
15 KOG0318 WD40 repeat stress pro 100.0 9E-40 1.9E-44 270.9 38.9 385 3-407 99-561 (603)
16 KOG0295 WD40 repeat-containing 100.0 8.2E-42 1.8E-46 270.5 23.1 285 41-405 102-405 (406)
17 KOG0291 WD40-repeat-containing 100.0 8E-40 1.7E-44 282.3 36.7 321 12-412 270-618 (893)
18 KOG0319 WD40-repeat-containing 100.0 8.7E-41 1.9E-45 287.6 30.0 376 9-415 104-544 (775)
19 KOG0284 Polyadenylation factor 100.0 2.5E-42 5.5E-47 277.3 18.0 280 47-406 96-380 (464)
20 KOG0279 G protein beta subunit 100.0 4.6E-40 9.9E-45 251.7 28.5 257 82-416 7-272 (315)
21 KOG0273 Beta-transducin family 100.0 2.4E-39 5.2E-44 264.8 28.1 293 42-415 173-491 (524)
22 KOG0293 WD40 repeat-containing 100.0 1.5E-39 3.2E-44 261.9 23.0 283 44-407 221-514 (519)
23 KOG0265 U5 snRNP-specific prot 100.0 1.8E-38 3.9E-43 245.4 27.6 286 43-405 43-337 (338)
24 KOG0284 Polyadenylation factor 100.0 1.4E-40 3.1E-45 267.2 16.4 273 13-365 102-380 (464)
25 KOG0263 Transcription initiati 100.0 1.2E-39 2.6E-44 283.1 23.0 270 47-407 378-650 (707)
26 cd00200 WD40 WD40 domain, foun 100.0 2.6E-37 5.7E-42 264.1 36.5 280 45-404 7-289 (289)
27 KOG0295 WD40 repeat-containing 100.0 7.9E-39 1.7E-43 253.6 24.0 272 13-364 114-405 (406)
28 KOG0266 WD40 repeat-containing 100.0 9.5E-38 2.1E-42 278.3 32.9 285 46-406 158-454 (456)
29 KOG0285 Pleiotropic regulator 100.0 3.8E-38 8.1E-43 249.4 25.7 280 45-406 149-439 (460)
30 KOG0263 Transcription initiati 100.0 1.5E-38 3.2E-43 276.4 24.4 268 9-366 380-650 (707)
31 KOG0645 WD40 repeat protein [G 100.0 2.6E-36 5.7E-41 230.2 32.8 278 43-406 10-311 (312)
32 KOG0265 U5 snRNP-specific prot 100.0 2E-37 4.4E-42 239.6 27.0 281 6-363 43-336 (338)
33 KOG0296 Angio-associated migra 100.0 4.1E-37 8.8E-42 244.1 28.4 304 39-414 56-364 (399)
34 KOG0645 WD40 repeat protein [G 100.0 1E-36 2.3E-41 232.4 29.5 284 4-365 8-311 (312)
35 KOG0319 WD40-repeat-containing 100.0 9.9E-37 2.1E-41 262.7 30.0 314 13-407 288-620 (775)
36 KOG0266 WD40 repeat-containing 100.0 1.3E-36 2.9E-41 271.0 31.3 277 13-365 165-454 (456)
37 KOG0306 WD40-repeat-containing 100.0 5.3E-36 1.1E-40 258.8 32.9 363 13-413 71-629 (888)
38 KOG0282 mRNA splicing factor [ 100.0 2.9E-38 6.3E-43 259.4 18.0 284 44-404 211-503 (503)
39 cd00200 WD40 WD40 domain, foun 100.0 2.4E-35 5.2E-40 252.0 36.6 277 7-363 6-289 (289)
40 KOG0293 WD40 repeat-containing 100.0 2.5E-37 5.5E-42 249.1 22.0 282 6-366 220-514 (519)
41 PLN00181 protein SPA1-RELATED; 100.0 4.3E-35 9.3E-40 280.8 38.8 301 28-405 458-792 (793)
42 KOG0285 Pleiotropic regulator 100.0 4.1E-36 8.9E-41 237.9 26.0 282 7-365 148-439 (460)
43 KOG0643 Translation initiation 100.0 1.3E-35 2.8E-40 226.0 27.2 291 40-406 3-317 (327)
44 KOG0278 Serine/threonine kinas 100.0 3.4E-37 7.4E-42 232.4 16.8 287 40-409 7-300 (334)
45 KOG1407 WD40 repeat protein [F 100.0 2.7E-35 5.8E-40 223.5 26.9 283 43-406 16-311 (313)
46 PLN00181 protein SPA1-RELATED; 100.0 5.4E-34 1.2E-38 273.2 38.4 282 13-364 489-792 (793)
47 KOG0306 WD40-repeat-containing 100.0 1.5E-34 3.3E-39 249.8 30.8 312 13-407 326-665 (888)
48 KOG0316 Conserved WD40 repeat- 100.0 1.2E-34 2.5E-39 216.9 25.6 278 43-404 13-297 (307)
49 KOG0276 Vesicle coat complex C 100.0 1.3E-34 2.8E-39 245.3 27.1 278 45-402 11-295 (794)
50 KOG0316 Conserved WD40 repeat- 100.0 1.9E-34 4.2E-39 215.7 23.7 239 12-261 22-266 (307)
51 KOG0282 mRNA splicing factor [ 100.0 6.9E-36 1.5E-40 245.5 17.5 273 12-363 219-503 (503)
52 KOG0275 Conserved WD40 repeat- 100.0 8E-36 1.7E-40 233.7 16.6 285 44-404 210-507 (508)
53 KOG1407 WD40 repeat protein [F 100.0 8.5E-34 1.8E-38 215.4 27.0 244 8-261 21-270 (313)
54 KOG0275 Conserved WD40 repeat- 100.0 9.5E-36 2.1E-40 233.2 16.8 278 8-363 214-507 (508)
55 KOG0281 Beta-TrCP (transducin 100.0 4.7E-36 1E-40 236.9 14.8 269 47-409 197-480 (499)
56 KOG0292 Vesicle coat complex C 100.0 1.4E-33 3E-38 248.2 31.3 245 8-261 10-289 (1202)
57 KOG0276 Vesicle coat complex C 100.0 1.4E-33 3E-38 239.1 30.2 241 12-261 18-266 (794)
58 KOG0640 mRNA cleavage stimulat 100.0 1.3E-34 2.8E-39 225.3 21.5 293 42-406 107-426 (430)
59 KOG1446 Histone H3 (Lys4) meth 100.0 3.3E-32 7.1E-37 212.8 32.8 288 41-408 7-305 (311)
60 KOG1446 Histone H3 (Lys4) meth 100.0 1.9E-32 4E-37 214.2 31.0 252 3-261 10-271 (311)
61 KOG0278 Serine/threonine kinas 100.0 8.6E-35 1.9E-39 219.5 17.3 281 7-370 11-302 (334)
62 KOG0292 Vesicle coat complex C 100.0 1.1E-33 2.4E-38 248.8 26.4 282 46-406 8-321 (1202)
63 KOG0281 Beta-TrCP (transducin 100.0 4.9E-35 1.1E-39 231.2 14.5 274 14-370 202-482 (499)
64 KOG0313 Microtubule binding pr 100.0 8.7E-33 1.9E-37 220.7 26.9 287 37-406 95-418 (423)
65 KOG1539 WD repeat protein [Gen 100.0 2.5E-31 5.3E-36 232.6 35.4 361 13-406 208-648 (910)
66 KOG0305 Anaphase promoting com 100.0 2.3E-32 5.1E-37 233.6 28.5 273 13-367 183-463 (484)
67 KOG0973 Histone transcription 100.0 1.7E-32 3.7E-37 247.0 28.0 286 46-409 12-358 (942)
68 KOG0305 Anaphase promoting com 100.0 8.8E-32 1.9E-36 230.1 28.1 275 51-408 181-463 (484)
69 KOG1408 WD40 repeat protein [F 100.0 1.1E-31 2.3E-36 231.3 28.3 320 13-407 330-714 (1080)
70 KOG0643 Translation initiation 100.0 1.4E-31 3.1E-36 204.1 25.7 297 1-366 1-318 (327)
71 KOG0288 WD40 repeat protein Ti 100.0 4.9E-33 1.1E-37 224.4 16.7 280 45-404 173-459 (459)
72 KOG0268 Sof1-like rRNA process 100.0 1.1E-32 2.3E-37 218.9 16.8 284 43-410 62-349 (433)
73 TIGR03866 PQQ_ABC_repeats PQQ- 100.0 2.6E-29 5.6E-34 216.2 39.0 290 20-386 2-300 (300)
74 KOG2096 WD40 repeat protein [G 100.0 1.3E-30 2.8E-35 203.9 27.5 291 44-404 83-400 (420)
75 KOG0310 Conserved WD40 repeat- 100.0 5.3E-31 1.2E-35 217.2 25.5 273 12-366 31-310 (487)
76 KOG0973 Histone transcription 100.0 1.1E-30 2.3E-35 235.6 27.5 279 13-368 19-358 (942)
77 KOG0288 WD40 repeat protein Ti 100.0 7.3E-32 1.6E-36 217.7 17.3 277 8-363 176-459 (459)
78 KOG0277 Peroxisomal targeting 100.0 1.6E-30 3.4E-35 197.0 22.5 277 51-405 12-308 (311)
79 PTZ00421 coronin; Provisional 100.0 3.9E-29 8.4E-34 222.0 34.9 242 14-261 27-299 (493)
80 KOG0310 Conserved WD40 repeat- 100.0 3.3E-30 7.2E-35 212.5 25.3 281 45-406 24-309 (487)
81 KOG0772 Uncharacterized conser 100.0 2.5E-30 5.5E-35 214.6 24.6 290 40-403 160-484 (641)
82 KOG0313 Microtubule binding pr 100.0 1.7E-29 3.7E-34 202.0 28.1 264 19-365 115-418 (423)
83 KOG0274 Cdc4 and related F-box 100.0 6.7E-30 1.5E-34 227.0 28.2 276 46-412 207-488 (537)
84 KOG0647 mRNA export protein (c 100.0 9.4E-30 2E-34 197.5 25.2 277 46-395 26-312 (347)
85 PTZ00421 coronin; Provisional 100.0 8.4E-29 1.8E-33 219.9 35.0 281 48-408 21-333 (493)
86 KOG0283 WD40 repeat-containing 100.0 1.7E-30 3.6E-35 228.4 23.3 244 45-366 265-577 (712)
87 KOG0289 mRNA splicing factor [ 100.0 1.5E-29 3.3E-34 205.7 26.8 279 48-405 220-505 (506)
88 KOG2055 WD40 repeat protein [G 100.0 7.5E-30 1.6E-34 209.0 25.0 288 47-406 213-512 (514)
89 KOG0641 WD40 repeat protein [G 100.0 4.2E-28 9E-33 181.0 32.0 289 40-406 25-349 (350)
90 KOG1539 WD repeat protein [Gen 100.0 1.2E-28 2.6E-33 216.0 33.7 356 20-412 173-612 (910)
91 KOG0299 U3 snoRNP-associated p 100.0 1.3E-29 2.9E-34 207.5 26.0 295 42-405 137-455 (479)
92 KOG2106 Uncharacterized conser 100.0 1.4E-28 3E-33 203.9 29.5 333 8-406 247-626 (626)
93 TIGR03866 PQQ_ABC_repeats PQQ- 100.0 1.3E-27 2.9E-32 205.6 37.0 278 60-411 2-284 (300)
94 KOG1408 WD40 repeat protein [F 100.0 5.6E-29 1.2E-33 214.7 27.8 209 178-413 460-678 (1080)
95 KOG0640 mRNA cleavage stimulat 100.0 1.1E-29 2.5E-34 197.9 21.0 276 13-365 118-426 (430)
96 KOG0277 Peroxisomal targeting 100.0 2.3E-29 5E-34 190.7 22.0 278 8-364 9-308 (311)
97 KOG0283 WD40 repeat-containing 100.0 9.1E-30 2E-34 223.8 22.9 237 8-253 265-577 (712)
98 KOG0274 Cdc4 and related F-box 100.0 1.1E-28 2.3E-33 219.4 29.6 267 19-373 218-490 (537)
99 PTZ00420 coronin; Provisional 100.0 6.6E-28 1.4E-32 215.1 34.2 236 15-255 34-296 (568)
100 KOG0294 WD40 repeat-containing 100.0 2.3E-28 4.9E-33 191.0 27.2 255 45-385 41-306 (362)
101 PTZ00420 coronin; Provisional 100.0 5.9E-28 1.3E-32 215.4 33.9 244 70-389 54-319 (568)
102 KOG2096 WD40 repeat protein [G 100.0 1.2E-28 2.7E-33 192.8 25.1 282 3-363 79-400 (420)
103 KOG2048 WD40 repeat protein [G 100.0 6.1E-27 1.3E-31 200.9 37.4 233 12-255 30-278 (691)
104 KOG0647 mRNA export protein (c 100.0 8.8E-29 1.9E-33 192.2 23.7 241 9-259 29-288 (347)
105 KOG0639 Transducin-like enhanc 100.0 1.2E-29 2.6E-34 210.1 20.0 282 41-405 413-703 (705)
106 KOG0289 mRNA splicing factor [ 100.0 1.4E-28 3E-33 200.1 24.7 272 14-364 226-505 (506)
107 KOG0300 WD40 repeat-containing 100.0 6.7E-29 1.5E-33 194.4 21.9 282 44-407 145-477 (481)
108 KOG0294 WD40 repeat-containing 100.0 7.7E-28 1.7E-32 188.1 26.5 261 62-408 4-283 (362)
109 KOG1273 WD40 repeat protein [G 100.0 2.6E-28 5.7E-33 190.7 23.4 300 43-410 20-326 (405)
110 KOG0772 Uncharacterized conser 100.0 1.6E-28 3.4E-33 204.1 22.7 273 13-363 173-485 (641)
111 KOG1036 Mitotic spindle checkp 100.0 1E-27 2.2E-32 186.9 25.5 244 7-261 13-271 (323)
112 KOG0308 Conserved WD40 repeat- 100.0 1E-28 2.2E-33 210.7 21.5 229 17-254 35-287 (735)
113 KOG0639 Transducin-like enhanc 100.0 9.5E-29 2.1E-33 204.9 19.9 270 13-364 425-703 (705)
114 KOG1036 Mitotic spindle checkp 100.0 2.9E-27 6.4E-32 184.4 26.9 276 46-396 12-294 (323)
115 KOG0299 U3 snoRNP-associated p 100.0 6.1E-28 1.3E-32 197.8 24.1 243 3-254 135-412 (479)
116 KOG0268 Sof1-like rRNA process 100.0 4E-29 8.7E-34 198.7 16.2 276 6-367 62-347 (433)
117 KOG2106 Uncharacterized conser 100.0 7.6E-26 1.6E-30 187.8 35.8 305 13-406 206-521 (626)
118 KOG1063 RNA polymerase II elon 100.0 9.8E-28 2.1E-32 206.1 24.9 324 5-408 186-650 (764)
119 KOG1274 WD40 repeat protein [G 100.0 3.6E-27 7.8E-32 209.0 27.8 279 44-403 10-297 (933)
120 KOG0646 WD40 repeat protein [G 100.0 1.3E-27 2.9E-32 196.2 23.1 298 28-389 18-332 (476)
121 KOG0646 WD40 repeat protein [G 100.0 7.1E-28 1.5E-32 197.8 21.2 271 63-413 11-314 (476)
122 KOG0641 WD40 repeat protein [G 100.0 8.4E-26 1.8E-30 168.8 29.8 278 12-365 37-349 (350)
123 KOG0308 Conserved WD40 repeat- 100.0 3.4E-28 7.4E-33 207.5 19.0 275 52-406 29-327 (735)
124 KOG2048 WD40 repeat protein [G 100.0 4.2E-25 9.1E-30 189.7 35.6 384 9-406 71-548 (691)
125 KOG0301 Phospholipase A2-activ 100.0 1.5E-26 3.2E-31 199.0 25.7 273 44-407 11-289 (745)
126 KOG1273 WD40 repeat protein [G 100.0 1.3E-26 2.9E-31 181.2 22.6 245 10-261 26-289 (405)
127 KOG0650 WD40 repeat nucleolar 100.0 3.7E-27 8.1E-32 199.4 20.6 306 8-404 398-733 (733)
128 KOG1274 WD40 repeat protein [G 100.0 4.1E-26 8.9E-31 202.4 27.3 238 7-253 10-263 (933)
129 KOG0300 WD40 repeat-containing 100.0 2.9E-26 6.2E-31 179.8 22.4 284 6-367 144-478 (481)
130 KOG1445 Tumor-specific antigen 100.0 1.6E-26 3.6E-31 197.1 21.8 152 13-166 85-249 (1012)
131 KOG1063 RNA polymerase II elon 100.0 3.1E-25 6.8E-30 190.9 28.8 378 13-408 151-604 (764)
132 KOG1332 Vesicle coat complex C 100.0 8E-27 1.7E-31 176.0 16.5 257 87-416 8-297 (299)
133 KOG2055 WD40 repeat protein [G 99.9 1.2E-25 2.5E-30 184.6 23.6 277 12-365 218-512 (514)
134 KOG0264 Nucleosome remodeling 99.9 1.8E-25 4E-30 183.2 21.4 244 87-406 121-404 (422)
135 KOG4283 Transcription-coupled 99.9 2.5E-24 5.5E-29 167.1 24.9 289 45-406 41-365 (397)
136 KOG0301 Phospholipase A2-activ 99.9 8.3E-25 1.8E-29 188.4 24.7 240 6-263 10-258 (745)
137 KOG0264 Nucleosome remodeling 99.9 5.7E-25 1.2E-29 180.4 22.4 260 43-366 120-405 (422)
138 KOG1538 Uncharacterized conser 99.9 3.1E-24 6.8E-29 184.4 26.9 232 13-259 18-258 (1081)
139 KOG4378 Nuclear protein COP1 [ 99.9 9.6E-25 2.1E-29 181.0 21.6 291 21-388 5-305 (673)
140 KOG1332 Vesicle coat complex C 99.9 3.3E-25 7.2E-30 167.3 17.2 244 45-365 9-286 (299)
141 KOG1034 Transcriptional repres 99.9 9.1E-25 2E-29 171.9 19.4 312 13-406 44-383 (385)
142 KOG0269 WD40 repeat-containing 99.9 5E-25 1.1E-29 192.0 17.1 240 7-253 39-297 (839)
143 KOG1963 WD40 repeat protein [G 99.9 1.2E-22 2.6E-27 180.0 31.4 372 13-407 22-539 (792)
144 KOG0267 Microtubule severing p 99.9 9.3E-26 2E-30 195.1 10.8 220 27-260 13-234 (825)
145 KOG1009 Chromatin assembly com 99.9 3.1E-23 6.8E-28 167.8 24.6 304 46-410 12-376 (434)
146 KOG0321 WD40 repeat-containing 99.9 1.3E-23 2.9E-28 179.3 22.8 286 51-408 53-393 (720)
147 KOG4328 WD40 protein [Function 99.9 2.8E-23 6E-28 170.6 23.5 290 46-407 185-496 (498)
148 KOG1538 Uncharacterized conser 99.9 1.2E-23 2.7E-28 180.7 21.3 276 49-409 14-296 (1081)
149 KOG0267 Microtubule severing p 99.9 1.4E-25 3E-30 194.0 9.4 243 70-397 14-259 (825)
150 KOG2919 Guanine nucleotide-bin 99.9 7.9E-23 1.7E-27 160.8 22.9 238 9-253 51-328 (406)
151 KOG2919 Guanine nucleotide-bin 99.9 7.4E-23 1.6E-27 161.0 22.3 270 49-397 51-361 (406)
152 KOG0269 WD40 repeat-containing 99.9 5.1E-24 1.1E-28 185.8 17.5 283 47-406 39-340 (839)
153 KOG2445 Nuclear pore complex c 99.9 2.4E-22 5.3E-27 157.0 24.3 248 87-406 10-318 (361)
154 PRK11028 6-phosphogluconolacto 99.9 7.7E-21 1.7E-25 164.8 34.5 279 61-410 3-310 (330)
155 KOG2445 Nuclear pore complex c 99.9 7E-22 1.5E-26 154.5 24.1 285 45-386 11-342 (361)
156 KOG4378 Nuclear protein COP1 [ 99.9 1.2E-22 2.6E-27 168.7 19.6 267 61-407 5-281 (673)
157 KOG4328 WD40 protein [Function 99.9 1.6E-22 3.5E-27 166.2 19.8 261 76-410 172-454 (498)
158 KOG4283 Transcription-coupled 99.9 1.2E-21 2.5E-26 152.4 23.2 217 86-368 39-279 (397)
159 KOG1009 Chromatin assembly com 99.9 5E-22 1.1E-26 161.0 21.2 280 13-370 19-377 (434)
160 PRK11028 6-phosphogluconolacto 99.9 2.7E-20 5.9E-25 161.4 33.4 225 26-254 10-260 (330)
161 KOG2110 Uncharacterized conser 99.9 1.3E-19 2.8E-24 145.5 32.0 286 48-414 6-341 (391)
162 KOG0270 WD40 repeat-containing 99.9 7.1E-22 1.5E-26 161.8 19.6 236 18-258 191-455 (463)
163 KOG0321 WD40 repeat-containing 99.9 1E-21 2.3E-26 167.9 21.0 278 13-367 55-393 (720)
164 KOG0307 Vesicle coat complex C 99.9 5.2E-23 1.1E-27 187.3 13.5 286 6-368 5-330 (1049)
165 COG2319 FOG: WD40 repeat [Gene 99.9 1.1E-18 2.3E-23 158.5 41.5 321 13-412 71-406 (466)
166 PF02239 Cytochrom_D1: Cytochr 99.9 7.5E-19 1.6E-23 151.6 36.2 321 59-411 5-352 (369)
167 KOG1963 WD40 repeat protein [G 99.9 7.1E-20 1.5E-24 162.7 30.0 376 10-411 163-588 (792)
168 KOG1445 Tumor-specific antigen 99.9 6.6E-21 1.4E-25 163.3 22.7 153 179-406 629-798 (1012)
169 PRK01742 tolB translocation pr 99.9 1.4E-20 2.9E-25 168.0 25.8 219 28-260 184-411 (429)
170 COG2319 FOG: WD40 repeat [Gene 99.9 2.3E-18 4.9E-23 156.3 40.0 313 13-407 115-443 (466)
171 KOG0302 Ribosome Assembly prot 99.9 1E-20 2.2E-25 152.0 21.1 233 10-249 154-435 (440)
172 KOG0650 WD40 repeat nucleolar 99.9 6.9E-21 1.5E-25 161.9 21.3 274 43-405 396-679 (733)
173 KOG4227 WD40 repeat protein [G 99.9 1.2E-20 2.6E-25 152.5 21.6 292 43-406 52-387 (609)
174 KOG0307 Vesicle coat complex C 99.9 2.5E-22 5.3E-27 183.0 12.8 239 13-255 70-330 (1049)
175 KOG0270 WD40 repeat-containing 99.9 4.4E-20 9.5E-25 151.5 23.8 234 13-256 131-408 (463)
176 PRK01742 tolB translocation pr 99.9 4.2E-20 9.1E-25 164.9 26.0 236 70-387 184-426 (429)
177 PF02239 Cytochrom_D1: Cytochr 99.9 2.4E-19 5.3E-24 154.6 29.8 288 13-374 42-356 (369)
178 KOG0322 G-protein beta subunit 99.9 4E-21 8.6E-26 147.1 16.5 286 45-405 12-322 (323)
179 KOG0302 Ribosome Assembly prot 99.9 4.7E-20 1E-24 148.2 21.8 201 44-253 148-379 (440)
180 PRK03629 tolB translocation pr 99.9 2.2E-19 4.8E-24 159.8 28.6 219 29-252 180-406 (429)
181 PRK03629 tolB translocation pr 99.9 3.4E-19 7.4E-24 158.6 29.2 241 71-386 180-427 (429)
182 PRK05137 tolB translocation pr 99.9 9E-19 2E-23 157.0 30.0 241 71-387 183-433 (435)
183 KOG1188 WD40 repeat protein [G 99.9 3.5E-20 7.6E-25 147.1 18.3 286 60-406 41-346 (376)
184 PRK05137 tolB translocation pr 99.9 9.3E-19 2E-23 156.9 30.0 223 29-256 183-416 (435)
185 PRK04922 tolB translocation pr 99.9 5.5E-19 1.2E-23 158.1 26.6 242 70-386 184-432 (433)
186 KOG1524 WD40 repeat-containing 99.9 9.6E-20 2.1E-24 153.1 19.2 222 13-247 20-250 (737)
187 KOG0303 Actin-binding protein 99.9 7.2E-19 1.6E-23 142.4 23.5 234 18-256 43-298 (472)
188 KOG0649 WD40 repeat protein [G 99.9 9.2E-19 2E-23 132.7 22.6 245 92-416 12-284 (325)
189 KOG4227 WD40 repeat protein [G 99.8 3.8E-19 8.2E-24 144.0 21.2 299 7-365 53-387 (609)
190 KOG1034 Transcriptional repres 99.8 2.3E-20 5.1E-25 147.3 13.7 263 13-365 95-383 (385)
191 KOG2315 Predicted translation 99.8 8.3E-18 1.8E-22 142.5 29.5 321 13-411 40-395 (566)
192 KOG1007 WD repeat protein TSSC 99.8 1.2E-18 2.6E-23 135.4 22.4 261 69-408 39-363 (370)
193 PRK04922 tolB translocation pr 99.8 1.4E-18 3E-23 155.5 26.4 220 29-253 185-412 (433)
194 PRK02889 tolB translocation pr 99.8 4E-18 8.8E-23 152.0 28.8 241 71-387 177-425 (427)
195 KOG1007 WD repeat protein TSSC 99.8 1.3E-18 2.7E-23 135.3 21.5 288 27-365 39-361 (370)
196 KOG0290 Conserved WD40 repeat- 99.8 2.5E-18 5.4E-23 133.8 22.0 231 13-253 50-319 (364)
197 KOG2110 Uncharacterized conser 99.8 5.8E-17 1.3E-21 130.5 30.5 233 13-255 11-251 (391)
198 KOG0322 G-protein beta subunit 99.8 1.9E-19 4.2E-24 138.0 15.4 271 13-364 20-322 (323)
199 KOG4497 Uncharacterized conser 99.8 1.5E-17 3.3E-22 131.8 25.7 307 13-399 54-425 (447)
200 KOG2314 Translation initiation 99.8 9.7E-18 2.1E-22 141.8 25.9 322 13-411 216-578 (698)
201 KOG1524 WD40 repeat-containing 99.8 7.3E-19 1.6E-23 147.9 18.8 262 45-402 12-282 (737)
202 KOG0771 Prolactin regulatory e 99.8 2.4E-19 5.1E-24 146.5 14.4 203 136-410 148-358 (398)
203 PRK02889 tolB translocation pr 99.8 4.7E-18 1E-22 151.6 24.2 216 13-233 201-425 (427)
204 COG5354 Uncharacterized protei 99.8 4.4E-17 9.5E-22 136.5 27.2 321 13-411 38-400 (561)
205 KOG0303 Actin-binding protein 99.8 3.8E-18 8.2E-23 138.2 19.9 223 6-233 77-320 (472)
206 KOG2321 WD40 repeat protein [G 99.8 1.7E-17 3.7E-22 140.9 23.8 282 43-406 47-343 (703)
207 KOG2111 Uncharacterized conser 99.8 4.2E-16 9E-21 123.2 29.7 283 49-413 7-332 (346)
208 KOG1188 WD40 repeat protein [G 99.8 3.5E-18 7.6E-23 135.9 18.0 190 21-216 42-250 (376)
209 KOG1517 Guanine nucleotide bin 99.8 1.4E-17 3.1E-22 151.0 24.1 283 12-368 1069-1384(1387)
210 KOG2139 WD40 repeat protein [G 99.8 8E-17 1.7E-21 129.3 25.5 176 13-194 104-297 (445)
211 KOG0642 Cell-cycle nuclear pro 99.8 7.1E-19 1.5E-23 148.8 14.6 247 44-371 291-567 (577)
212 KOG0644 Uncharacterized conser 99.8 2.5E-19 5.4E-24 158.2 11.8 276 43-408 186-470 (1113)
213 KOG0642 Cell-cycle nuclear pro 99.8 2.1E-18 4.6E-23 146.0 16.2 258 85-412 289-567 (577)
214 KOG1517 Guanine nucleotide bin 99.8 3.3E-17 7.1E-22 148.7 24.5 287 49-409 1066-1384(1387)
215 PRK04792 tolB translocation pr 99.8 1E-16 2.2E-21 143.4 27.8 226 29-260 199-432 (448)
216 KOG1587 Cytoplasmic dynein int 99.8 4.5E-17 9.7E-22 144.5 25.1 263 70-409 222-519 (555)
217 KOG0771 Prolactin regulatory e 99.8 3E-18 6.4E-23 140.2 16.0 198 94-366 148-355 (398)
218 KOG2394 WD40 protein DMR-N9 [G 99.8 3.1E-17 6.7E-22 138.2 22.1 270 49-413 125-459 (636)
219 KOG0290 Conserved WD40 repeat- 99.8 2.4E-16 5.1E-21 122.9 25.0 284 41-402 38-361 (364)
220 KOG1587 Cytoplasmic dynein int 99.8 7.4E-17 1.6E-21 143.2 25.2 261 29-366 223-517 (555)
221 PRK00178 tolB translocation pr 99.8 2.6E-16 5.7E-21 141.5 29.1 219 29-252 180-406 (430)
222 PRK04792 tolB translocation pr 99.8 7.1E-17 1.5E-21 144.4 25.0 217 12-233 222-447 (448)
223 PRK01029 tolB translocation pr 99.8 4E-16 8.6E-21 138.4 29.4 246 70-388 165-426 (428)
224 KOG1310 WD40 repeat protein [G 99.8 7.6E-17 1.6E-21 136.4 23.2 224 5-256 45-307 (758)
225 PF10282 Lactonase: Lactonase, 99.8 4.3E-14 9.2E-19 122.7 41.1 286 28-384 13-345 (345)
226 PF08662 eIF2A: Eukaryotic tra 99.8 2.2E-17 4.7E-22 129.6 18.5 164 181-418 9-191 (194)
227 KOG1523 Actin-related protein 99.8 6.1E-17 1.3E-21 127.8 20.6 201 46-255 9-239 (361)
228 KOG0649 WD40 repeat protein [G 99.8 3.2E-16 7E-21 119.1 23.4 222 13-252 16-274 (325)
229 COG4946 Uncharacterized protei 99.8 3.8E-15 8.3E-20 124.1 31.3 364 15-416 44-487 (668)
230 TIGR02800 propeller_TolB tol-p 99.8 4.9E-16 1.1E-20 139.7 28.4 226 29-260 171-404 (417)
231 KOG1240 Protein kinase contain 99.8 1.7E-16 3.6E-21 146.3 25.2 221 33-261 1034-1282(1431)
232 COG2706 3-carboxymuconate cycl 99.8 1.1E-14 2.4E-19 117.8 32.5 289 27-385 15-345 (346)
233 PRK01029 tolB translocation pr 99.8 3.8E-16 8.3E-21 138.5 26.6 219 13-234 190-426 (428)
234 PRK00178 tolB translocation pr 99.8 5.7E-16 1.2E-20 139.3 27.8 241 71-387 180-428 (430)
235 TIGR02800 propeller_TolB tol-p 99.8 6.6E-16 1.4E-20 138.9 28.1 181 71-255 171-357 (417)
236 KOG0644 Uncharacterized conser 99.8 2.2E-18 4.7E-23 152.4 11.0 240 4-261 184-435 (1113)
237 KOG1334 WD40 repeat protein [G 99.8 7.3E-18 1.6E-22 140.3 13.4 283 6-366 138-467 (559)
238 KOG1334 WD40 repeat protein [G 99.8 1.9E-17 4.2E-22 137.8 15.7 303 44-411 139-471 (559)
239 KOG1272 WD40-repeat-containing 99.8 1.9E-18 4.2E-23 142.8 9.4 233 90-406 129-362 (545)
240 KOG2111 Uncharacterized conser 99.8 1.1E-14 2.5E-19 115.1 28.7 234 12-254 10-258 (346)
241 TIGR02658 TTQ_MADH_Hv methylam 99.8 9.3E-14 2E-18 117.2 36.2 272 18-373 11-338 (352)
242 PF10282 Lactonase: Lactonase, 99.8 6.3E-14 1.4E-18 121.6 36.1 244 12-258 41-330 (345)
243 KOG1272 WD40-repeat-containing 99.8 1.1E-17 2.3E-22 138.5 11.9 200 49-260 131-331 (545)
244 TIGR02658 TTQ_MADH_Hv methylam 99.8 9.5E-14 2E-18 117.1 35.5 278 70-413 27-337 (352)
245 COG4946 Uncharacterized protei 99.8 2.7E-14 5.8E-19 119.2 31.5 219 15-242 274-508 (668)
246 KOG2315 Predicted translation 99.7 1.7E-15 3.6E-20 128.7 24.5 294 11-386 77-410 (566)
247 KOG1523 Actin-related protein 99.7 6.3E-16 1.4E-20 122.2 20.4 251 88-398 8-270 (361)
248 COG2706 3-carboxymuconate cycl 99.7 9.1E-14 2E-18 112.6 32.8 237 13-252 45-321 (346)
249 PF08662 eIF2A: Eukaryotic tra 99.7 1.1E-15 2.4E-20 120.0 21.1 163 51-217 9-187 (194)
250 KOG2394 WD40 protein DMR-N9 [G 99.7 4.2E-16 9.1E-21 131.5 19.6 236 16-277 132-384 (636)
251 KOG2139 WD40 repeat protein [G 99.7 2.4E-15 5.2E-20 121.0 22.6 239 9-252 142-431 (445)
252 KOG1240 Protein kinase contain 99.7 1.2E-14 2.6E-19 134.3 26.8 238 13-255 1054-1337(1431)
253 KOG2321 WD40 repeat protein [G 99.7 5.7E-15 1.2E-19 125.8 22.3 247 4-261 45-311 (703)
254 PRK04043 tolB translocation pr 99.7 2.4E-13 5.1E-18 120.0 31.5 218 29-254 170-402 (419)
255 KOG2314 Translation initiation 99.7 6.2E-14 1.3E-18 119.2 25.9 287 50-415 213-534 (698)
256 PRK04043 tolB translocation pr 99.7 7.1E-14 1.5E-18 123.2 26.0 201 13-218 193-409 (419)
257 KOG1354 Serine/threonine prote 99.7 4.1E-14 8.9E-19 113.2 21.5 289 46-412 24-365 (433)
258 COG5354 Uncharacterized protei 99.7 3.3E-13 7.1E-18 113.7 27.9 298 13-397 77-420 (561)
259 KOG3881 Uncharacterized conser 99.6 2.9E-13 6.3E-18 110.2 21.9 265 45-389 53-344 (412)
260 KOG3881 Uncharacterized conser 99.6 1.2E-13 2.7E-18 112.4 18.3 207 18-233 115-342 (412)
261 KOG0974 WD-repeat protein WDR6 99.6 9.2E-14 2E-18 126.6 19.3 269 48-407 8-289 (967)
262 PF04762 IKI3: IKI3 family; I 99.6 6.8E-11 1.5E-15 113.7 38.2 351 13-406 81-519 (928)
263 KOG1354 Serine/threonine prote 99.6 1.5E-13 3.4E-18 110.0 17.0 234 13-255 31-362 (433)
264 KOG1310 WD40 repeat protein [G 99.6 5.8E-14 1.3E-18 119.2 14.1 165 83-252 43-231 (758)
265 KOG1912 WD40 repeat protein [G 99.6 7.8E-12 1.7E-16 110.9 27.8 231 13-253 21-305 (1062)
266 PLN02919 haloacid dehalogenase 99.6 2.6E-11 5.6E-16 118.8 33.6 243 8-256 568-892 (1057)
267 PLN02919 haloacid dehalogenase 99.5 3.6E-11 7.8E-16 117.8 31.9 263 94-410 571-892 (1057)
268 TIGR03300 assembly_YfgL outer 99.5 4.4E-11 9.5E-16 106.0 29.4 290 19-403 65-376 (377)
269 PF04762 IKI3: IKI3 family; I 99.5 4.6E-10 1E-14 108.1 37.8 313 47-407 75-457 (928)
270 KOG1409 Uncharacterized conser 99.5 1.3E-11 2.8E-16 99.2 21.9 231 14-254 31-272 (404)
271 PF07433 DUF1513: Protein of u 99.5 1.6E-10 3.5E-15 94.1 28.1 245 92-404 6-283 (305)
272 KOG4547 WD40 repeat-containing 99.5 2.3E-11 4.9E-16 104.8 23.8 185 16-208 2-219 (541)
273 KOG2041 WD40 repeat protein [G 99.5 3.4E-10 7.4E-15 100.0 29.4 227 13-248 20-333 (1189)
274 KOG2041 WD40 repeat protein [G 99.5 1.9E-11 4.2E-16 107.6 21.6 279 46-405 13-336 (1189)
275 KOG4547 WD40 repeat-containing 99.5 1.1E-11 2.4E-16 106.6 18.8 188 142-407 3-221 (541)
276 PF00930 DPPIV_N: Dipeptidyl p 99.4 1.5E-09 3.2E-14 94.8 30.7 225 16-255 1-271 (353)
277 KOG0974 WD-repeat protein WDR6 99.4 1E-11 2.2E-16 113.6 16.0 190 54-253 94-289 (967)
278 TIGR03300 assembly_YfgL outer 99.4 1.8E-09 3.8E-14 95.8 30.1 261 59-411 65-343 (377)
279 PF08450 SGL: SMP-30/Gluconola 99.4 4.7E-09 1E-13 87.0 30.2 217 12-240 4-243 (246)
280 PF15492 Nbas_N: Neuroblastoma 99.4 7.6E-10 1.6E-14 87.5 22.5 231 13-261 3-268 (282)
281 COG0823 TolB Periplasmic compo 99.4 1.5E-10 3.3E-15 101.5 20.0 202 13-216 198-409 (425)
282 KOG0280 Uncharacterized conser 99.4 7.5E-10 1.6E-14 87.4 21.5 260 70-409 46-336 (339)
283 KOG1912 WD40 repeat protein [G 99.4 6.1E-10 1.3E-14 99.2 23.4 367 21-411 81-556 (1062)
284 PF08450 SGL: SMP-30/Gluconola 99.4 2.3E-08 4.9E-13 83.0 31.6 225 94-394 3-243 (246)
285 KOG4532 WD40-like repeat conta 99.3 1.4E-09 3.1E-14 84.7 21.6 265 70-415 52-340 (344)
286 KOG1409 Uncharacterized conser 99.3 1.3E-10 2.9E-15 93.5 16.2 248 81-409 15-273 (404)
287 KOG1064 RAVE (regulator of V-A 99.3 2.5E-11 5.4E-16 117.1 13.2 165 88-261 2206-2375(2439)
288 PF07433 DUF1513: Protein of u 99.3 9.9E-09 2.1E-13 83.9 26.0 213 48-261 5-256 (305)
289 COG0823 TolB Periplasmic compo 99.3 1.7E-09 3.8E-14 94.9 21.1 181 71-255 174-361 (425)
290 KOG0309 Conserved WD40 repeat- 99.2 2.1E-10 4.5E-15 101.6 13.9 198 45-253 22-233 (1081)
291 PF14583 Pectate_lyase22: Olig 99.2 1.2E-07 2.6E-12 80.2 29.7 226 13-243 41-303 (386)
292 COG5170 CDC55 Serine/threonine 99.2 1.1E-09 2.4E-14 87.2 16.5 292 46-406 25-367 (460)
293 PF14583 Pectate_lyase22: Olig 99.2 1E-07 2.2E-12 80.5 29.1 220 34-256 16-276 (386)
294 PF15492 Nbas_N: Neuroblastoma 99.2 2.1E-08 4.6E-13 79.5 22.4 226 95-373 2-267 (282)
295 KOG4532 WD40-like repeat conta 99.2 9.6E-09 2.1E-13 80.3 20.2 226 20-253 85-332 (344)
296 KOG3914 WD repeat protein WDR4 99.2 4.8E-10 1E-14 92.3 13.4 79 331-412 149-229 (390)
297 PRK11138 outer membrane biogen 99.2 8E-08 1.7E-12 85.6 27.7 296 19-405 69-393 (394)
298 KOG1064 RAVE (regulator of V-A 99.1 3.8E-10 8.2E-15 109.3 11.9 197 45-261 2206-2407(2439)
299 PF06433 Me-amine-dh_H: Methyl 99.1 1.5E-07 3.3E-12 78.0 25.3 277 70-413 17-327 (342)
300 PF13360 PQQ_2: PQQ-like domai 99.1 1.2E-07 2.5E-12 78.5 25.4 216 27-258 2-236 (238)
301 PF00930 DPPIV_N: Dipeptidyl p 99.1 1.3E-07 2.8E-12 82.7 26.4 227 12-241 47-346 (353)
302 PRK02888 nitrous-oxide reducta 99.1 1.1E-07 2.3E-12 85.3 25.4 202 18-256 140-355 (635)
303 PF13360 PQQ_2: PQQ-like domai 99.1 2.1E-07 4.7E-12 76.9 25.8 227 113-411 3-235 (238)
304 KOG4649 PQQ (pyrrolo-quinoline 99.1 1.5E-06 3.4E-11 68.1 27.8 127 13-142 16-145 (354)
305 PF06433 Me-amine-dh_H: Methyl 99.1 1.6E-06 3.4E-11 72.2 29.6 267 28-376 17-331 (342)
306 KOG0882 Cyclophilin-related pe 99.1 1.2E-09 2.6E-14 91.4 11.3 284 44-375 6-315 (558)
307 KOG4190 Uncharacterized conser 99.1 1.2E-09 2.6E-14 93.9 10.6 207 43-260 731-956 (1034)
308 KOG3617 WD40 and TPR repeat-co 99.0 1.2E-08 2.6E-13 92.3 16.3 330 6-395 14-374 (1416)
309 KOG0309 Conserved WD40 repeat- 99.0 3.6E-09 7.7E-14 94.0 12.0 217 10-235 27-258 (1081)
310 KOG3914 WD repeat protein WDR4 99.0 1.2E-08 2.5E-13 84.3 13.4 157 13-175 68-233 (390)
311 KOG0280 Uncharacterized conser 99.0 1.5E-07 3.3E-12 74.7 18.8 196 50-254 124-335 (339)
312 KOG1920 IkappaB kinase complex 99.0 7E-07 1.5E-11 84.4 26.3 195 46-252 67-274 (1265)
313 KOG4190 Uncharacterized conser 99.0 1.8E-09 3.8E-14 92.9 8.4 208 128-409 731-951 (1034)
314 COG3391 Uncharacterized conser 99.0 1.1E-05 2.4E-10 71.1 32.2 287 30-388 13-310 (381)
315 KOG0882 Cyclophilin-related pe 99.0 3.5E-08 7.6E-13 82.8 15.0 262 89-414 8-313 (558)
316 PRK11138 outer membrane biogen 99.0 4E-07 8.7E-12 81.2 22.8 265 59-411 69-358 (394)
317 PRK02888 nitrous-oxide reducta 99.0 1.9E-07 4.1E-12 83.8 20.2 217 13-241 198-450 (635)
318 PF02897 Peptidase_S9_N: Proly 99.0 6.8E-06 1.5E-10 74.0 30.7 242 13-257 129-409 (414)
319 COG5170 CDC55 Serine/threonine 98.9 1.3E-08 2.9E-13 81.2 10.5 231 13-252 32-367 (460)
320 KOG2695 WD40 repeat protein [G 98.9 1.5E-08 3.4E-13 82.0 9.5 161 97-265 218-389 (425)
321 KOG1832 HIV-1 Vpr-binding prot 98.9 4.1E-09 8.9E-14 95.6 6.3 195 45-261 1099-1300(1516)
322 KOG1920 IkappaB kinase complex 98.8 2.9E-06 6.2E-11 80.5 24.3 194 13-208 74-321 (1265)
323 COG3391 Uncharacterized conser 98.8 1.2E-05 2.5E-10 71.0 27.1 220 12-233 78-309 (381)
324 KOG1832 HIV-1 Vpr-binding prot 98.8 4E-09 8.7E-14 95.7 4.1 124 128-260 1097-1222(1516)
325 cd00216 PQQ_DH Dehydrogenases 98.8 3.7E-05 8E-10 70.4 29.8 232 18-260 61-382 (488)
326 COG3386 Gluconolactonase [Carb 98.8 1.8E-05 4E-10 66.6 25.4 227 95-395 29-274 (307)
327 KOG2695 WD40 repeat protein [G 98.8 3.9E-08 8.3E-13 79.8 8.6 158 13-176 217-387 (425)
328 cd00216 PQQ_DH Dehydrogenases 98.8 1.7E-05 3.8E-10 72.5 26.8 196 59-261 61-328 (488)
329 KOG1275 PAB-dependent poly(A) 98.8 3E-07 6.4E-12 84.2 14.7 179 143-404 146-340 (1118)
330 PF00400 WD40: WD domain, G-be 98.7 2.1E-08 4.5E-13 56.1 4.4 36 369-404 3-39 (39)
331 COG3490 Uncharacterized protei 98.7 1.5E-05 3.3E-10 63.6 21.3 153 91-243 68-246 (366)
332 KOG3621 WD40 repeat-containing 98.7 1.1E-05 2.4E-10 72.2 22.4 205 46-261 32-254 (726)
333 PF00780 CNH: CNH domain; Int 98.7 6.3E-05 1.4E-09 63.7 26.6 226 15-261 3-264 (275)
334 KOG1645 RING-finger-containing 98.7 3E-06 6.5E-11 70.5 17.1 94 72-168 175-269 (463)
335 PF02897 Peptidase_S9_N: Proly 98.7 0.00025 5.5E-09 64.0 31.7 199 50-252 126-357 (414)
336 PF00400 WD40: WD domain, G-be 98.7 7.8E-08 1.7E-12 53.8 5.6 38 211-250 2-39 (39)
337 KOG1645 RING-finger-containing 98.7 3E-06 6.4E-11 70.6 16.2 225 30-261 175-428 (463)
338 COG3386 Gluconolactonase [Carb 98.6 0.00012 2.5E-09 61.9 25.5 218 13-241 30-274 (307)
339 KOG4714 Nucleoporin [Nuclear s 98.6 6.5E-07 1.4E-11 70.0 10.8 192 136-404 93-316 (319)
340 KOG1275 PAB-dependent poly(A) 98.6 1.8E-06 3.9E-11 79.3 15.1 180 18-208 146-341 (1118)
341 PF11768 DUF3312: Protein of u 98.6 9.3E-06 2E-10 71.5 18.9 72 332-406 258-329 (545)
342 PF04053 Coatomer_WDAD: Coatom 98.6 4.6E-05 9.9E-10 67.8 23.0 176 46-248 31-219 (443)
343 KOG2114 Vacuolar assembly/sort 98.6 9.3E-06 2E-10 74.3 18.8 198 54-261 30-252 (933)
344 PF04053 Coatomer_WDAD: Coatom 98.6 4.1E-05 8.9E-10 68.1 22.5 217 11-253 36-263 (443)
345 PF04841 Vps16_N: Vps16, N-ter 98.6 0.00023 5.1E-09 63.3 27.2 205 13-233 34-270 (410)
346 KOG2114 Vacuolar assembly/sort 98.6 6.7E-05 1.5E-09 69.0 23.6 189 13-210 29-244 (933)
347 KOG3621 WD40 repeat-containing 98.6 1.9E-05 4.1E-10 70.9 19.6 107 14-122 40-155 (726)
348 KOG4714 Nucleoporin [Nuclear s 98.6 2E-06 4.4E-11 67.3 11.9 163 46-214 88-259 (319)
349 KOG4649 PQQ (pyrrolo-quinoline 98.5 0.00023 5E-09 56.3 25.2 196 55-264 18-218 (354)
350 PRK13616 lipoprotein LpqB; Pro 98.5 4.5E-05 9.7E-10 70.6 22.4 188 48-247 350-563 (591)
351 KOG2066 Vacuolar assembly/sort 98.5 3.2E-05 7E-10 70.4 19.1 169 19-208 49-232 (846)
352 PRK10115 protease 2; Provision 98.5 0.00068 1.5E-08 64.7 28.9 235 13-255 132-397 (686)
353 TIGR03075 PQQ_enz_alc_DH PQQ-d 98.5 0.0012 2.7E-08 60.8 31.6 188 20-213 70-338 (527)
354 PF06977 SdiA-regulated: SdiA- 98.5 0.00049 1.1E-08 56.1 26.0 196 47-249 21-247 (248)
355 KOG2066 Vacuolar assembly/sort 98.4 1.2E-05 2.5E-10 73.2 15.0 137 18-165 82-233 (846)
356 PF06977 SdiA-regulated: SdiA- 98.4 0.0006 1.3E-08 55.6 25.6 206 128-403 17-247 (248)
357 COG3490 Uncharacterized protei 98.4 0.00046 9.9E-09 55.5 21.4 225 36-260 56-318 (366)
358 PF11768 DUF3312: Protein of u 98.4 1E-05 2.2E-10 71.3 13.1 92 30-125 238-333 (545)
359 PF04841 Vps16_N: Vps16, N-ter 98.4 0.0017 3.7E-08 57.9 28.7 174 71-260 62-254 (410)
360 KOG3617 WD40 and TPR repeat-co 98.3 2.8E-05 6E-10 71.3 15.6 110 51-166 19-132 (1416)
361 PRK10115 protease 2; Provision 98.3 0.0044 9.6E-08 59.3 33.4 197 49-249 128-341 (686)
362 PF08596 Lgl_C: Lethal giant l 98.3 0.0011 2.3E-08 58.4 23.2 202 49-261 3-299 (395)
363 PF03178 CPSF_A: CPSF A subuni 98.2 0.0023 5.1E-08 55.4 25.2 175 70-252 2-202 (321)
364 TIGR03075 PQQ_enz_alc_DH PQQ-d 98.2 0.0041 8.9E-08 57.5 31.5 195 59-259 69-340 (527)
365 PF03178 CPSF_A: CPSF A subuni 98.2 0.0025 5.5E-08 55.2 23.4 212 28-249 2-262 (321)
366 PRK13616 lipoprotein LpqB; Pro 98.2 0.00055 1.2E-08 63.6 20.1 147 11-166 353-528 (591)
367 PF10647 Gmad1: Lipoprotein Lp 98.1 0.0043 9.2E-08 51.4 22.2 163 49-216 25-204 (253)
368 PF08553 VID27: VID27 cytoplas 98.1 0.00019 4.1E-09 67.6 15.6 131 157-364 504-646 (794)
369 KOG1008 Uncharacterized conser 97.9 3.8E-06 8.3E-11 74.3 1.2 198 47-252 56-275 (783)
370 KOG4499 Ca2+-binding protein R 97.9 0.0076 1.6E-07 47.3 19.0 222 98-386 22-263 (310)
371 PF08553 VID27: VID27 cytoplas 97.9 0.0019 4.2E-08 61.1 18.2 149 187-406 490-647 (794)
372 KOG2395 Protein involved in va 97.8 0.0029 6.4E-08 55.5 17.2 149 141-365 342-500 (644)
373 KOG1897 Damage-specific DNA bi 97.8 0.035 7.6E-07 53.0 28.7 312 15-406 591-942 (1096)
374 PF00780 CNH: CNH domain; Int 97.8 0.018 3.9E-07 48.7 24.2 144 100-259 5-172 (275)
375 PF05096 Glu_cyclase_2: Glutam 97.8 0.014 3.1E-07 47.5 20.3 172 13-194 50-247 (264)
376 KOG1897 Damage-specific DNA bi 97.8 0.04 8.7E-07 52.6 33.6 367 18-414 498-908 (1096)
377 KOG4640 Anaphase-promoting com 97.7 0.00015 3.3E-09 64.5 8.2 76 334-412 21-98 (665)
378 KOG1008 Uncharacterized conser 97.7 1.2E-05 2.6E-10 71.2 0.5 186 18-208 69-274 (783)
379 COG3204 Uncharacterized protei 97.6 0.026 5.6E-07 46.2 19.3 186 45-236 83-297 (316)
380 smart00320 WD40 WD40 repeats. 97.6 0.00017 3.7E-09 39.5 4.7 31 374-404 10-40 (40)
381 KOG4441 Proteins containing BT 97.6 0.017 3.6E-07 54.0 19.9 230 17-254 283-548 (571)
382 KOG4640 Anaphase-promoting com 97.6 0.00055 1.2E-08 61.1 9.3 92 47-141 20-114 (665)
383 PHA02713 hypothetical protein; 97.6 0.015 3.2E-07 54.5 19.3 220 29-255 273-536 (557)
384 PF05694 SBP56: 56kDa selenium 97.6 0.046 9.9E-07 47.8 23.7 243 101-395 86-392 (461)
385 PF14655 RAB3GAP2_N: Rab3 GTPa 97.4 0.08 1.7E-06 46.9 23.8 81 178-261 308-407 (415)
386 smart00320 WD40 WD40 repeats. 97.4 0.00057 1.2E-08 37.2 5.2 38 211-250 3-40 (40)
387 KOG4441 Proteins containing BT 97.3 0.1 2.2E-06 48.9 21.4 237 101-415 284-555 (571)
388 PHA02713 hypothetical protein; 97.3 0.041 9E-07 51.5 18.7 96 71-168 273-378 (557)
389 PF05096 Glu_cyclase_2: Glutam 97.3 0.07 1.5E-06 43.6 24.6 193 39-241 34-249 (264)
390 PF08596 Lgl_C: Lethal giant l 97.3 0.059 1.3E-06 47.7 18.4 179 8-194 87-323 (395)
391 TIGR03118 PEPCTERM_chp_1 conse 97.3 0.078 1.7E-06 43.8 25.0 208 49-261 24-288 (336)
392 PF12894 Apc4_WD40: Anaphase-p 97.3 0.0012 2.6E-08 37.8 5.3 35 375-409 10-44 (47)
393 PF05694 SBP56: 56kDa selenium 97.3 0.11 2.4E-06 45.5 24.0 221 18-241 86-392 (461)
394 PF10647 Gmad1: Lipoprotein Lp 97.2 0.092 2E-06 43.6 26.0 113 134-251 25-143 (253)
395 KOG2395 Protein involved in va 97.2 0.0099 2.1E-07 52.4 12.1 142 17-165 343-500 (644)
396 COG4257 Vgb Streptogramin lyas 97.1 0.11 2.5E-06 42.1 21.8 246 93-416 64-315 (353)
397 PF14783 BBS2_Mid: Ciliary BBS 97.0 0.053 1.1E-06 37.6 13.4 88 20-115 16-108 (111)
398 KOG4499 Ca2+-binding protein R 97.0 0.11 2.5E-06 41.0 19.8 213 13-232 20-263 (310)
399 PF15390 DUF4613: Domain of un 97.0 0.25 5.4E-06 44.8 29.1 149 48-210 20-187 (671)
400 PF14870 PSII_BNR: Photosynthe 97.0 0.17 3.7E-06 42.8 22.2 223 12-249 66-301 (302)
401 PF14655 RAB3GAP2_N: Rab3 GTPa 97.0 0.23 4.9E-06 44.1 20.1 82 328-411 302-403 (415)
402 PF12894 Apc4_WD40: Anaphase-p 96.9 0.0043 9.3E-08 35.5 5.4 32 224-256 13-44 (47)
403 KOG2444 WD40 repeat protein [G 96.8 0.0051 1.1E-07 48.1 6.7 62 343-406 112-177 (238)
404 PHA02790 Kelch-like protein; P 96.8 0.17 3.6E-06 46.7 17.7 187 58-254 271-472 (480)
405 KOG2079 Vacuolar assembly/sort 96.7 0.0089 1.9E-07 57.3 8.5 99 19-121 99-203 (1206)
406 PHA03098 kelch-like protein; P 96.7 0.25 5.4E-06 46.5 18.2 152 17-169 293-468 (534)
407 PHA03098 kelch-like protein; P 96.6 0.21 4.5E-06 47.0 17.4 190 57-254 293-513 (534)
408 PF14783 BBS2_Mid: Ciliary BBS 96.6 0.13 2.8E-06 35.7 13.7 100 50-160 2-109 (111)
409 KOG2079 Vacuolar assembly/sort 96.5 0.011 2.3E-07 56.8 7.9 71 189-261 99-169 (1206)
410 TIGR02604 Piru_Ver_Nterm putat 96.5 0.3 6.5E-06 43.3 16.7 138 9-150 15-201 (367)
411 KOG2280 Vacuolar assembly/sort 96.5 0.6 1.3E-05 43.7 18.4 203 157-388 64-271 (829)
412 PF07995 GSDH: Glucose / Sorbo 96.5 0.5 1.1E-05 41.1 25.8 101 49-152 3-133 (331)
413 TIGR02604 Piru_Ver_Nterm putat 96.5 0.47 1E-05 42.1 17.7 143 91-241 14-202 (367)
414 PF07995 GSDH: Glucose / Sorbo 96.4 0.56 1.2E-05 40.8 27.4 66 334-401 253-330 (331)
415 PF15390 DUF4613: Domain of un 96.3 0.23 4.9E-06 45.1 14.4 116 6-123 55-188 (671)
416 PF14870 PSII_BNR: Photosynthe 96.3 0.55 1.2E-05 39.9 31.9 271 46-403 15-301 (302)
417 KOG2377 Uncharacterized conser 96.2 0.61 1.3E-05 41.0 16.0 124 223-415 67-194 (657)
418 PF12234 Rav1p_C: RAVE protein 96.2 0.32 6.9E-06 45.5 15.4 72 178-251 30-103 (631)
419 TIGR03074 PQQ_membr_DH membran 96.2 1.3 2.9E-05 43.1 23.5 113 144-261 194-353 (764)
420 COG3204 Uncharacterized protei 96.2 0.56 1.2E-05 38.8 20.4 162 87-252 82-263 (316)
421 COG5167 VID27 Protein involved 96.2 0.2 4.4E-06 44.5 13.2 142 15-165 475-632 (776)
422 COG5167 VID27 Protein involved 96.2 0.25 5.5E-06 43.9 13.5 100 142-251 477-590 (776)
423 COG3823 Glutamine cyclotransfe 96.1 0.46 9.9E-06 37.1 14.5 153 101-261 55-213 (262)
424 TIGR03074 PQQ_membr_DH membran 96.1 1.6 3.5E-05 42.5 33.3 201 59-261 194-486 (764)
425 COG4257 Vgb Streptogramin lyas 95.9 0.77 1.7E-05 37.6 22.0 194 48-252 62-262 (353)
426 PF05935 Arylsulfotrans: Aryls 95.8 1.6 3.4E-05 40.3 21.4 166 157-374 128-310 (477)
427 KOG3630 Nuclear pore complex, 95.6 1.1 2.4E-05 44.3 16.3 113 134-251 102-227 (1405)
428 PF12234 Rav1p_C: RAVE protein 95.6 0.34 7.3E-06 45.3 12.8 105 13-121 35-156 (631)
429 PF07569 Hira: TUP1-like enhan 95.6 0.14 3.1E-06 41.2 9.4 75 339-416 16-105 (219)
430 PF10313 DUF2415: Uncharacteri 95.6 0.083 1.8E-06 29.3 5.4 32 48-80 1-35 (43)
431 KOG2444 WD40 repeat protein [G 95.5 0.055 1.2E-06 42.5 6.3 101 20-122 71-178 (238)
432 PF07250 Glyoxal_oxid_N: Glyox 95.5 0.31 6.8E-06 39.7 10.8 141 30-175 48-207 (243)
433 KOG2377 Uncharacterized conser 95.5 0.52 1.1E-05 41.4 12.4 136 13-152 28-173 (657)
434 PHA02790 Kelch-like protein; P 95.4 2.2 4.8E-05 39.5 17.9 144 18-169 271-427 (480)
435 KOG2280 Vacuolar assembly/sort 95.3 2.7 5.8E-05 39.7 17.5 182 70-261 64-255 (829)
436 PF07676 PD40: WD40-like Beta 95.2 0.11 2.3E-06 28.4 5.4 32 44-75 5-38 (39)
437 PF12768 Rax2: Cortical protei 95.2 0.67 1.4E-05 38.9 12.2 103 70-172 16-130 (281)
438 KOG3630 Nuclear pore complex, 95.2 0.43 9.3E-06 46.9 12.2 146 91-241 101-262 (1405)
439 PF10168 Nup88: Nuclear pore c 95.0 0.64 1.4E-05 44.8 13.1 70 335-407 86-180 (717)
440 TIGR02276 beta_rpt_yvtn 40-res 94.9 0.2 4.3E-06 27.8 6.1 39 17-55 1-41 (42)
441 PRK13684 Ycf48-like protein; P 94.9 2.4 5.2E-05 37.0 25.3 151 90-250 172-329 (334)
442 PF07676 PD40: WD40-like Beta 94.8 0.16 3.4E-06 27.7 5.4 34 85-118 3-38 (39)
443 KOG1520 Predicted alkaloid syn 94.8 1.8 4E-05 37.4 13.8 119 91-242 115-238 (376)
444 PF14269 Arylsulfotran_2: Aryl 94.8 2.3 5.1E-05 36.3 19.2 68 336-405 146-219 (299)
445 PF03022 MRJP: Major royal jel 94.7 2.4 5.2E-05 36.0 18.4 69 336-407 130-216 (287)
446 TIGR02276 beta_rpt_yvtn 40-res 94.7 0.22 4.8E-06 27.6 5.8 41 57-98 1-41 (42)
447 PF10313 DUF2415: Uncharacteri 94.7 0.17 3.7E-06 28.1 4.9 31 377-407 1-34 (43)
448 KOG2247 WD40 repeat-containing 94.6 0.0043 9.3E-08 54.1 -2.1 134 13-149 40-176 (615)
449 PRK13684 Ycf48-like protein; P 94.5 3 6.5E-05 36.4 30.9 155 177-406 172-331 (334)
450 PLN02153 epithiospecifier prot 94.5 3.1 6.7E-05 36.5 20.9 151 18-169 32-229 (341)
451 PF07250 Glyoxal_oxid_N: Glyox 94.5 1.6 3.4E-05 35.8 12.3 145 114-261 47-206 (243)
452 PF10168 Nup88: Nuclear pore c 94.4 1 2.3E-05 43.4 12.9 34 332-367 145-181 (717)
453 PF03022 MRJP: Major royal jel 94.4 2.8 6.1E-05 35.6 19.7 163 71-239 35-252 (287)
454 PF07569 Hira: TUP1-like enhan 94.3 0.34 7.4E-06 39.1 8.2 30 230-259 18-47 (219)
455 smart00036 CNH Domain found in 94.2 3.3 7.2E-05 35.5 25.5 232 17-261 11-279 (302)
456 PF14781 BBS2_N: Ciliary BBSom 94.1 1.6 3.4E-05 31.6 11.6 73 336-411 50-130 (136)
457 COG1506 DAP2 Dipeptidyl aminop 94.1 5.8 0.00013 38.2 23.2 140 10-153 62-236 (620)
458 KOG1898 Splicing factor 3b, su 94.1 5.5 0.00012 39.4 16.4 175 71-252 854-1048(1205)
459 COG3823 Glutamine cyclotransfe 94.0 2.4 5.1E-05 33.3 15.5 169 18-194 55-245 (262)
460 PF08728 CRT10: CRT10; InterP 94.0 5.1 0.00011 38.4 16.0 69 335-405 165-245 (717)
461 COG4590 ABC-type uncharacteriz 94.0 0.63 1.4E-05 40.9 9.5 153 11-169 224-390 (733)
462 COG4590 ABC-type uncharacteriz 94.0 0.17 3.6E-06 44.2 6.1 164 224-408 222-388 (733)
463 KOG1983 Tomosyn and related SN 93.9 4.4 9.5E-05 41.0 16.5 77 331-414 196-272 (993)
464 KOG2247 WD40 repeat-containing 93.8 0.0077 1.7E-07 52.6 -2.1 138 50-193 37-175 (615)
465 PF13449 Phytase-like: Esteras 93.8 4.3 9.2E-05 35.4 15.0 75 332-406 145-249 (326)
466 PF14781 BBS2_N: Ciliary BBSom 93.6 2 4.3E-05 31.1 13.3 107 53-167 4-127 (136)
467 PF08728 CRT10: CRT10; InterP 93.3 8 0.00017 37.1 16.6 147 13-164 44-245 (717)
468 COG1770 PtrB Protease II [Amin 93.2 7.5 0.00016 36.6 22.9 57 12-69 133-195 (682)
469 COG1770 PtrB Protease II [Amin 93.0 8 0.00017 36.4 22.9 118 49-168 130-259 (682)
470 TIGR02171 Fb_sc_TIGR02171 Fibr 93.0 1.3 2.9E-05 43.0 10.7 91 104-194 320-415 (912)
471 TIGR03118 PEPCTERM_chp_1 conse 92.9 5.1 0.00011 33.7 21.0 66 343-411 210-284 (336)
472 COG5276 Uncharacterized conser 92.6 5.4 0.00012 33.3 28.5 194 44-252 83-285 (370)
473 KOG3616 Selective LIM binding 92.6 7.6 0.00016 37.0 14.5 72 329-406 333-405 (1636)
474 TIGR02171 Fb_sc_TIGR02171 Fibr 92.6 1.3 2.8E-05 43.1 10.0 87 20-106 319-414 (912)
475 KOG1916 Nuclear protein, conta 92.5 0.11 2.4E-06 49.3 3.1 64 341-406 191-265 (1283)
476 KOG1916 Nuclear protein, conta 92.5 0.16 3.5E-06 48.3 4.1 130 114-252 112-265 (1283)
477 PF12657 TFIIIC_delta: Transcr 92.5 1.3 2.9E-05 34.3 8.6 30 378-407 87-122 (173)
478 PRK13614 lipoprotein LpqB; Pro 92.2 10 0.00023 35.6 19.8 154 12-167 347-520 (573)
479 PF12657 TFIIIC_delta: Transcr 92.2 2.6 5.6E-05 32.7 9.9 24 10-34 7-30 (173)
480 KOG4460 Nuclear pore complex, 92.2 3.9 8.4E-05 37.0 11.7 34 224-257 167-203 (741)
481 PF03088 Str_synth: Strictosid 92.0 2.5 5.5E-05 28.3 8.5 42 156-198 36-77 (89)
482 PF13449 Phytase-like: Esteras 91.9 8.1 0.00017 33.7 21.7 62 179-242 86-166 (326)
483 PLN02153 epithiospecifier prot 91.6 9 0.0002 33.6 15.2 110 18-128 85-232 (341)
484 PF14761 HPS3_N: Hermansky-Pud 91.5 6 0.00013 31.5 15.6 103 21-125 31-167 (215)
485 TIGR03032 conserved hypothetic 91.2 8.2 0.00018 32.8 12.0 109 73-188 188-315 (335)
486 COG1506 DAP2 Dipeptidyl aminop 90.8 16 0.00035 35.2 28.4 178 11-195 16-233 (620)
487 PRK13613 lipoprotein LpqB; Pro 90.6 16 0.00035 34.8 19.3 176 12-190 367-564 (599)
488 KOG4460 Nuclear pore complex, 90.5 5.7 0.00012 36.0 11.1 71 335-407 105-199 (741)
489 PF02333 Phytase: Phytase; In 90.2 12 0.00027 32.9 22.8 187 18-210 67-291 (381)
490 PLN00033 photosystem II stabil 90.2 13 0.00029 33.3 27.0 147 93-249 241-396 (398)
491 COG5290 IkappaB kinase complex 89.8 20 0.00043 34.6 15.4 32 88-120 110-141 (1243)
492 PRK13613 lipoprotein LpqB; Pro 89.7 19 0.00042 34.3 20.4 194 49-246 364-576 (599)
493 COG5290 IkappaB kinase complex 89.3 6.5 0.00014 37.7 10.9 94 93-190 249-349 (1243)
494 PF14761 HPS3_N: Hermansky-Pud 89.3 9.7 0.00021 30.3 13.9 101 60-166 29-164 (215)
495 PLN00033 photosystem II stabil 89.1 16 0.00035 32.7 31.4 104 136-249 242-353 (398)
496 TIGR03547 muta_rot_YjhT mutatr 88.4 17 0.00037 32.0 22.5 40 358-397 291-331 (346)
497 PF11715 Nup160: Nucleoporin N 88.2 1.7 3.7E-05 41.1 7.1 68 343-412 156-254 (547)
498 PF03088 Str_synth: Strictosid 88.1 6.1 0.00013 26.5 7.7 41 28-68 37-77 (89)
499 COG5276 Uncharacterized conser 87.8 15 0.00033 30.8 24.2 139 19-168 96-244 (370)
500 PF10214 Rrn6: RNA polymerase 87.7 31 0.00068 34.3 22.1 213 146-419 29-292 (765)
No 1
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=4.4e-58 Score=364.85 Aligned_cols=319 Identities=17% Similarity=0.301 Sum_probs=286.3
Q ss_pred hhcccccC---eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEe-ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccC
Q 014755 5 EAYKQTGP---SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLF-SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQ 79 (419)
Q Consensus 5 ~~~~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~ 79 (419)
...||.+. ++|+|+|++||+|+ |.++++||+.+..+..+. +|...|.|++|+|||+.||+|+.+ |+|++||..+
T Consensus 110 S~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~d-g~I~lwdpkt 188 (480)
T KOG0271|consen 110 SIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKD-GSIRLWDPKT 188 (480)
T ss_pred ccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccC-CeEEEecCCC
Confidence 34577776 68999999999998 888999999999888765 499999999999999999999987 8999999999
Q ss_pred Ccce-eeeecCCccEeEEEECC-----CCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEee
Q 014755 80 PEWT-CKIDEGLAGIAYARWSP-----DSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTR 152 (419)
Q Consensus 80 ~~~~-~~~~~~~~~v~~~~~~~-----~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~ 152 (419)
|+++ ..+.+|...|++++|.| ..++|++++.|+ .++|||+..+.++. +.+|..+|+|+.|--+| +|++++.
T Consensus 189 g~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg-~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~g-liySgS~ 266 (480)
T KOG0271|consen 189 GQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDG-SVRIWDTKLGTCVRTLSGHTASVTCVRWGGEG-LIYSGSQ 266 (480)
T ss_pred CCcccccccCcccceeEEeecccccCCCccceecccCCC-CEEEEEccCceEEEEeccCccceEEEEEcCCc-eEEecCC
Confidence 8765 45889999999999976 677899999988 99999999999988 99999999999997654 8899998
Q ss_pred cCCCCeEEEEeccCCeEEEEEeccccceeeeeEC-----------CCCC-------------------------eEEEEc
Q 014755 153 RDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWS-----------PDDS-------------------------AIVIWD 196 (419)
Q Consensus 153 ~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~-----------~~~~-------------------------~l~~~~ 196 (419)
| ++|++|+...|...+.+++|...|+.++.+ |.++ .++.
T Consensus 267 D---rtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVS-- 341 (480)
T KOG0271|consen 267 D---RTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVS-- 341 (480)
T ss_pred C---ceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEE--
Confidence 7 899999999999999999999999998877 2233 3555
Q ss_pred CCCCceEEEEcC--CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccce
Q 014755 197 SPLEYKVLIYSP--DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAV 274 (419)
Q Consensus 197 ~~~~~~i~~~d~--~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 274 (419)
++.|.++.+|+. +.+++..+.+|.. -|+.+.||||+++||+++.|..|++|+..+|+.+.+|.
T Consensus 342 gsDd~tlflW~p~~~kkpi~rmtgHq~--lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfR------------- 406 (480)
T KOG0271|consen 342 GSDDFTLFLWNPFKSKKPITRMTGHQA--LVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFR------------- 406 (480)
T ss_pred ecCCceEEEecccccccchhhhhchhh--heeeEEECCCccEEEEeecccceeeeeCCCcchhhhhh-------------
Confidence 778999999999 5667888888777 89999999999999999999999999999999888765
Q ss_pred eccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCC
Q 014755 275 FKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDS 354 (419)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d 354 (419)
+|-..|..++||.|.++|++++.|
T Consensus 407 --------------------------------------------------------GHv~~VYqvawsaDsRLlVS~SkD 430 (480)
T KOG0271|consen 407 --------------------------------------------------------GHVAAVYQVAWSADSRLLVSGSKD 430 (480)
T ss_pred --------------------------------------------------------hccceeEEEEeccCccEEEEcCCC
Confidence 578889999999999999999999
Q ss_pred CCceEEEeeccCCCceeec-ccCCCeeEEEeCCCCCeEEEEeCCCcEEEee
Q 014755 355 MPTTLWIWDICRQEPAAIL-VQKDPIRAATWDPTCTRLVLCTGSSHLYMWT 404 (419)
Q Consensus 355 ~~~~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~ 404 (419)
.++++|++++.++..-+ +|...|.++.|+|||+.+++++.|..+++|.
T Consensus 431 --sTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 431 --STLKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred --ceEEEEEeeeeeecccCCCCCceEEEEEecCCCceeecCCCceEEEeec
Confidence 99999999999988766 5999999999999999999999999999995
No 2
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=4.4e-52 Score=330.68 Aligned_cols=287 Identities=16% Similarity=0.239 Sum_probs=256.7
Q ss_pred ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCe
Q 014755 45 SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTA 124 (419)
Q Consensus 45 ~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~ 124 (419)
+|.++|.|++|+|+|+.|++|+.| .++++||+.+..+..+.++|...|.|++|+|||+.|++++.++ +|++||.++|+
T Consensus 113 GH~e~Vl~~~fsp~g~~l~tGsGD-~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg-~I~lwdpktg~ 190 (480)
T KOG0271|consen 113 GHGEAVLSVQFSPTGSRLVTGSGD-TTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDG-SIRLWDPKTGQ 190 (480)
T ss_pred CCCCcEEEEEecCCCceEEecCCC-ceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCC-eEEEecCCCCC
Confidence 589999999999999999999988 6999999999999999999999999999999999999999998 99999999988
Q ss_pred EEE--eccCCCCeeeEEEcc-----CCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcC
Q 014755 125 CVH--VQSPKHASKGVAFTQ-----DGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDS 197 (419)
Q Consensus 125 ~~~--~~~~~~~~~~~~~~~-----~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 197 (419)
.+. +.+|...|++++|.| .+++|++++.| |.++|||+..+.++..+.+|..+|+|+.|--+| +|+. +
T Consensus 191 ~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skD---g~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~g-liyS--g 264 (480)
T KOG0271|consen 191 QIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKD---GSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEG-LIYS--G 264 (480)
T ss_pred cccccccCcccceeEEeecccccCCCccceecccCC---CCEEEEEccCceEEEEeccCccceEEEEEcCCc-eEEe--c
Confidence 776 899999999999965 56899999987 899999999999999999999999999997655 4555 8
Q ss_pred CCCceEEEEcC-CCceEEEEeecCCCCceeEEEEc-----------cCCC-------------------------eEEEE
Q 014755 198 PLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWS-----------PCGQ-------------------------FLAVG 240 (419)
Q Consensus 198 ~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s-----------~~~~-------------------------~l~~~ 240 (419)
+.|++|++|+. +|.+.+.+.+|.+ .|+.++.+ |.++ .+++|
T Consensus 265 S~DrtIkvw~a~dG~~~r~lkGHah--wvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSg 342 (480)
T KOG0271|consen 265 SQDRTIKVWRALDGKLCRELKGHAH--WVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSG 342 (480)
T ss_pred CCCceEEEEEccchhHHHhhcccch--heeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEe
Confidence 88999999999 9999999999998 89999887 2233 48888
Q ss_pred EecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCC
Q 014755 241 SYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISL 320 (419)
Q Consensus 241 ~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (419)
+.|.++.+|+....+
T Consensus 343 sDd~tlflW~p~~~k----------------------------------------------------------------- 357 (480)
T KOG0271|consen 343 SDDFTLFLWNPFKSK----------------------------------------------------------------- 357 (480)
T ss_pred cCCceEEEecccccc-----------------------------------------------------------------
Confidence 888888888854211
Q ss_pred CCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec-ccCCCeeEEEeCCCCCeEEEEeCCCc
Q 014755 321 PFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL-VQKDPIRAATWDPTCTRLVLCTGSSH 399 (419)
Q Consensus 321 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~ 399 (419)
++.....+|...|+.+.||||++++|+++-| ..|++||..+|+.+..+ +|-.+|+.++|+.|.++|++||.|.+
T Consensus 358 ---kpi~rmtgHq~lVn~V~fSPd~r~IASaSFD--kSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS~SkDsT 432 (480)
T KOG0271|consen 358 ---KPITRMTGHQALVNHVSFSPDGRYIASASFD--KSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVSGSKDST 432 (480)
T ss_pred ---cchhhhhchhhheeeEEECCCccEEEEeecc--cceeeeeCCCcchhhhhhhccceeEEEEeccCccEEEEcCCCce
Confidence 2223345799999999999999999999999 99999999999988777 59999999999999999999999999
Q ss_pred EEEeecCCCeEE
Q 014755 400 LYMWTPSGAYCV 411 (419)
Q Consensus 400 i~vw~~~~~~~~ 411 (419)
+++|++.+.++.
T Consensus 433 LKvw~V~tkKl~ 444 (480)
T KOG0271|consen 433 LKVWDVRTKKLK 444 (480)
T ss_pred EEEEEeeeeeec
Confidence 999999987764
No 3
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=6.7e-50 Score=322.09 Aligned_cols=281 Identities=18% Similarity=0.274 Sum_probs=262.5
Q ss_pred eecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCC--CCEEEEEecCCCeEEEEEcC
Q 014755 44 FSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPD--SRHILTTSDFQLRLTVWSLL 121 (419)
Q Consensus 44 ~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~~i~iwd~~ 121 (419)
++...+|..+.||+|++.|++++.+ |.++||+..+...+.++.+|...+.++.|+|. +..+++++.|+ ++++|++.
T Consensus 172 ~gd~rPis~~~fS~ds~~laT~sws-G~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dg-tvklw~~~ 249 (459)
T KOG0272|consen 172 VGDTRPISGCSFSRDSKHLATGSWS-GLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADG-TVKLWKLS 249 (459)
T ss_pred ccCCCcceeeEeecCCCeEEEeecC-CceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCC-ceeeeccC
Confidence 3457899999999999999999998 99999999999999999999999999999996 66899999998 99999999
Q ss_pred CCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCC
Q 014755 122 NTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLE 200 (419)
Q Consensus 122 ~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~ 200 (419)
+..++. +.+|...|..++|+|+|++|++++.| .+-++||++++.++....+|...|.+++|.|||..+++ ++.|
T Consensus 250 ~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD---~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~t--GGlD 324 (459)
T KOG0272|consen 250 QETPLQDLEGHLARVSRVAFHPSGKFLGTASFD---STWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAAT--GGLD 324 (459)
T ss_pred CCcchhhhhcchhhheeeeecCCCceeeecccc---cchhhcccccchhhHhhcccccccceeEecCCCceeec--cCcc
Confidence 987777 99999999999999999999999998 79999999999999999999999999999999999988 8889
Q ss_pred ceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCC
Q 014755 201 YKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVD 279 (419)
Q Consensus 201 ~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (419)
..-++||+ +|.++..+.+|.. .|.+++|+|+|..||+|+.|++++|||++..+++.++
T Consensus 325 ~~~RvWDlRtgr~im~L~gH~k--~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~i------------------- 383 (459)
T KOG0272|consen 325 SLGRVWDLRTGRCIMFLAGHIK--EILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTI------------------- 383 (459)
T ss_pred chhheeecccCcEEEEeccccc--ceeeEeECCCceEEeecCCCCcEEEeeecccccceec-------------------
Confidence 99999999 9999999999777 8999999999999999999999999999877665543
Q ss_pred CcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEcc-CCeEEEEecCCCCce
Q 014755 280 EPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSS-DSQYICTRNDSMPTT 358 (419)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~d~~~~ 358 (419)
++|..-|+.++|+| .|.+|++++.| ++
T Consensus 384 --------------------------------------------------pAH~nlVS~Vk~~p~~g~fL~TasyD--~t 411 (459)
T KOG0272|consen 384 --------------------------------------------------PAHSNLVSQVKYSPQEGYFLVTASYD--NT 411 (459)
T ss_pred --------------------------------------------------ccccchhhheEecccCCeEEEEcccC--cc
Confidence 36888899999999 78999999999 99
Q ss_pred EEEeeccCCCceeec-ccCCCeeEEEeCCCCCeEEEEeCCCcEEEee
Q 014755 359 LWIWDICRQEPAAIL-VQKDPIRAATWDPTCTRLVLCTGSSHLYMWT 404 (419)
Q Consensus 359 i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~ 404 (419)
++||...+.+++..+ ||.+.|.+++++||++++++++.|.++++|.
T Consensus 412 ~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 412 VKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred eeeecCCCcccchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 999999999988777 6999999999999999999999999999996
No 4
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=2.4e-48 Score=313.13 Aligned_cols=271 Identities=17% Similarity=0.245 Sum_probs=251.7
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEe-ecCcceeEEEEecC--CCeEEEEeccCCeEEEEEccCCcceeeeec
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLF-SCLDKISYIEWALD--SEYILCGLYKRLMIQAWSLTQPEWTCKIDE 88 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~-~~~~~v~~~~~s~~--~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~ 88 (419)
+.||+|++.||+|+ +|.+++|+..+...++++ +|.+.|.++.|+|. +..+|+++.| |++++|++++..++..+.+
T Consensus 181 ~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~D-gtvklw~~~~e~~l~~l~g 259 (459)
T KOG0272|consen 181 CSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASAD-GTVKLWKLSQETPLQDLEG 259 (459)
T ss_pred eEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccC-CceeeeccCCCcchhhhhc
Confidence 78999999999999 999999999998777755 59999999999996 6689999987 8999999999899999999
Q ss_pred CCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCC
Q 014755 89 GLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTW 167 (419)
Q Consensus 89 ~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~ 167 (419)
|...|..++|+|+|++|++++.|. +-++||++++.... ..+|..+|.+++|.|||..+++|+.| ..-+|||++++
T Consensus 260 H~~RVs~VafHPsG~~L~TasfD~-tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD---~~~RvWDlRtg 335 (459)
T KOG0272|consen 260 HLARVSRVAFHPSGKFLGTASFDS-TWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLD---SLGRVWDLRTG 335 (459)
T ss_pred chhhheeeeecCCCceeeeccccc-chhhcccccchhhHhhcccccccceeEecCCCceeeccCcc---chhheeecccC
Confidence 999999999999999999999998 99999999987776 88999999999999999999999987 68899999999
Q ss_pred eEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEcc-CCCeEEEEEecCc
Q 014755 168 EIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSP-CGQFLAVGSYDQT 245 (419)
Q Consensus 168 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~ 245 (419)
+.+..+.+|..+|..++|+|+|..+++ ++.|+++++||+ ..+.+..+..|.+ -|+.+.|+| .|.+|++++.|++
T Consensus 336 r~im~L~gH~k~I~~V~fsPNGy~lAT--gs~Dnt~kVWDLR~r~~ly~ipAH~n--lVS~Vk~~p~~g~fL~TasyD~t 411 (459)
T KOG0272|consen 336 RCIMFLAGHIKEILSVAFSPNGYHLAT--GSSDNTCKVWDLRMRSELYTIPAHSN--LVSQVKYSPQEGYFLVTASYDNT 411 (459)
T ss_pred cEEEEecccccceeeEeECCCceEEee--cCCCCcEEEeeecccccceecccccc--hhhheEecccCCeEEEEcccCcc
Confidence 999999999999999999999999999 888999999999 5566778888777 899999999 7889999999999
Q ss_pred EEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCC
Q 014755 246 LRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKP 325 (419)
Q Consensus 246 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (419)
+++|...++.+++.+.
T Consensus 412 ~kiWs~~~~~~~ksLa---------------------------------------------------------------- 427 (459)
T KOG0272|consen 412 VKIWSTRTWSPLKSLA---------------------------------------------------------------- 427 (459)
T ss_pred eeeecCCCcccchhhc----------------------------------------------------------------
Confidence 9999999988887764
Q ss_pred CCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEee
Q 014755 326 PTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWD 363 (419)
Q Consensus 326 ~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd 363 (419)
+|.+.|.++.++||+.++++++.| +++++|.
T Consensus 428 -----GHe~kV~s~Dis~d~~~i~t~s~D--RT~KLW~ 458 (459)
T KOG0272|consen 428 -----GHEGKVISLDISPDSQAIATSSFD--RTIKLWR 458 (459)
T ss_pred -----CCccceEEEEeccCCceEEEeccC--ceeeecc
Confidence 688889999999999999999999 9999995
No 5
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=1.4e-44 Score=278.10 Aligned_cols=283 Identities=19% Similarity=0.271 Sum_probs=255.9
Q ss_pred EeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC
Q 014755 43 LFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN 122 (419)
Q Consensus 43 ~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~ 122 (419)
+.+|.+.|.++.|++|.++|++++.| |.+.|||.-+......++.....|..++|+|.|++++.++-|+ ...||++.+
T Consensus 51 LkGH~~Ki~~~~ws~Dsr~ivSaSqD-GklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN-~Csiy~ls~ 128 (343)
T KOG0286|consen 51 LKGHLNKIYAMDWSTDSRRIVSASQD-GKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDN-KCSIYPLST 128 (343)
T ss_pred ecccccceeeeEecCCcCeEEeeccC-CeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCc-eeEEEeccc
Confidence 44699999999999999999999987 8999999999988888888888999999999999999999988 999999985
Q ss_pred C------eEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECC-CCCeEEE
Q 014755 123 T------ACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSP-DDSAIVI 194 (419)
Q Consensus 123 ~------~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~ 194 (419)
. ...+ +.+|...+.++.|-+| ..|++++.| .+.-+||+++++.+..+.+|.+.|.+++++| +++.++.
T Consensus 129 ~d~~g~~~v~r~l~gHtgylScC~f~dD-~~ilT~SGD---~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvS 204 (343)
T KOG0286|consen 129 RDAEGNVRVSRELAGHTGYLSCCRFLDD-NHILTGSGD---MTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVS 204 (343)
T ss_pred ccccccceeeeeecCccceeEEEEEcCC-CceEecCCC---ceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEe
Confidence 4 2222 7889999999999885 567777776 7999999999999999999999999999999 8888888
Q ss_pred EcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccc
Q 014755 195 WDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPA 273 (419)
Q Consensus 195 ~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~ 273 (419)
++-|...++||+ .+.+.+.+.+|+. .|+++.|.|+|.-+++|+.|++.++||++..+.+..+.++..
T Consensus 205 --g~cD~~aklWD~R~~~c~qtF~ghes--DINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~-------- 272 (343)
T KOG0286|consen 205 --GGCDKSAKLWDVRSGQCVQTFEGHES--DINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSI-------- 272 (343)
T ss_pred --cccccceeeeeccCcceeEeeccccc--ccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcc--------
Confidence 778999999999 9999999999887 899999999999999999999999999999988888764432
Q ss_pred eeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecC
Q 014755 274 VFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRND 353 (419)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 353 (419)
..+|++++||..|++|++|..
T Consensus 273 -----------------------------------------------------------~~gitSv~FS~SGRlLfagy~ 293 (343)
T KOG0286|consen 273 -----------------------------------------------------------ICGITSVAFSKSGRLLFAGYD 293 (343)
T ss_pred -----------------------------------------------------------cCCceeEEEcccccEEEeeec
Confidence 235899999999999999998
Q ss_pred CCCceEEEeeccCCCceeec-ccCCCeeEEEeCCCCCeEEEEeCCCcEEEee
Q 014755 354 SMPTTLWIWDICRQEPAAIL-VQKDPIRAATWDPTCTRLVLCTGSSHLYMWT 404 (419)
Q Consensus 354 d~~~~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~ 404 (419)
| .++.+||.-.++....+ +|.+.|+++..+|||.-|+++|.|.+++||.
T Consensus 294 d--~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 294 D--FTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred C--CceeEeeccccceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 8 99999999998877666 6999999999999999999999999999995
No 6
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=100.00 E-value=2.8e-45 Score=286.81 Aligned_cols=402 Identities=51% Similarity=0.920 Sum_probs=349.7
Q ss_pred CchhhhcccccC-eEEcCCCCEEEEEeCCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccC
Q 014755 1 MEFTEAYKQTGP-SCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQ 79 (419)
Q Consensus 1 m~~~~~~~~~~~-~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~ 79 (419)
|+|++.+...+. ++|||+|++||++++.++.|-|.++.++.+++..-+.|..+.|..|..+++++.+.++.|.+|++..
T Consensus 1 M~Fte~fk~~~~~c~fSp~g~yiAs~~~yrlviRd~~tlq~~qlf~cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Q 80 (447)
T KOG4497|consen 1 MDFTELFKSLNPFCSFSPCGNYIASLSRYRLVIRDSETLQLHQLFLCLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQ 80 (447)
T ss_pred CChHHHHHhcCCceeECCCCCeeeeeeeeEEEEeccchhhHHHHHHHHHHhhheeeeccceeeeeeeeccceEEEEEeec
Confidence 899999999885 8999999999999999999999999998888877888999999999999999888889999999999
Q ss_pred CcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeE
Q 014755 80 PEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYI 159 (419)
Q Consensus 80 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v 159 (419)
.+....+.....++.+++|||||+.++..++-.-.|.+|.+.+.+...+...+..+..++|+|||++.+..++.+++..+
T Consensus 81 pew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv 160 (447)
T KOG4497|consen 81 PEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYV 160 (447)
T ss_pred ceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEecccccCceeEEECCCCceeeeeecccHHHHH
Confidence 99999999999999999999999998888876669999999999988888888889999999999999999988776777
Q ss_pred EEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEE
Q 014755 160 NLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAV 239 (419)
Q Consensus 160 ~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 239 (419)
.+..-..++.++.+....-..+.+.|+|||..+++|+..-+..|+.|.. ...+..++|+|.+++|+.
T Consensus 161 ~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe~-------------~lG~k~v~wsP~~qflav 227 (447)
T KOG4497|consen 161 QISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYER-------------GLGLKFVEWSPCNQFLAV 227 (447)
T ss_pred HHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeeeee-------------ccceeEEEeccccceEEe
Confidence 7776677777888877778889999999999999998766666655432 115788999999999999
Q ss_pred EEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCC-ceEEEEEeccCCC
Q 014755 240 GSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNG-HIKVRYEVMEIPI 318 (419)
Q Consensus 240 ~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 318 (419)
|+.|+.+||.+--+.++..++-|...++.|...+.+.+..++.......+.+.+... .+..+ .....|.....+.
T Consensus 228 GsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~----~a~~~~~se~~YE~~~~pv 303 (447)
T KOG4497|consen 228 GSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDL----EAHIWEESETIYEQQMTPV 303 (447)
T ss_pred eccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCcc----ccCccccchhhhhhhhcce
Confidence 999999999999999999999888888877777777766666555555555443322 22222 3346788888889
Q ss_pred CCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecccCCCeeEEEeCCCCCeEEEEeCCC
Q 014755 319 SLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCTRLVLCTGSS 398 (419)
Q Consensus 319 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg 398 (419)
+++..+|...+++..-++.-++||+|..|+|+-.+.+++.+.+||++..++...+....+|....|.|....|+.+....
T Consensus 304 ~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLiQk~piraf~WdP~~prL~vctg~s 383 (447)
T KOG4497|consen 304 KVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLIQKHPIRAFEWDPGRPRLVVCTGKS 383 (447)
T ss_pred eeecccCCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhhhccceeEEEeCCCCceEEEEcCCc
Confidence 99999999999999999999999999999999998889999999999999998888899999999999999999888888
Q ss_pred cEEEeecCCCeEEecCCCCCC
Q 014755 399 HLYMWTPSGAYCVSNPLPQFN 419 (419)
Q Consensus 399 ~i~vw~~~~~~~~~~~~~~f~ 419 (419)
.+++|.+.+..++..|.++|+
T Consensus 384 rLY~W~psg~~~V~vP~~GF~ 404 (447)
T KOG4497|consen 384 RLYFWAPSGPRVVGVPKKGFN 404 (447)
T ss_pred eEEEEcCCCceEEecCCCCce
Confidence 999999999999999999985
No 7
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=3.5e-43 Score=270.46 Aligned_cols=279 Identities=17% Similarity=0.229 Sum_probs=250.4
Q ss_pred hcccccC---eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC
Q 014755 6 AYKQTGP---SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP 80 (419)
Q Consensus 6 ~~~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~ 80 (419)
+.||.+. +-|++|.++|++++ ||.+.|||.-+...++.++ ....|..++|+|.|+++|+|+-| +...||++.+.
T Consensus 51 LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLd-N~Csiy~ls~~ 129 (343)
T KOG0286|consen 51 LKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLD-NKCSIYPLSTR 129 (343)
T ss_pred ecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcC-ceeEEEecccc
Confidence 4577666 78999999999999 9999999998877777666 56789999999999999999988 69999999855
Q ss_pred ------cceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEcc-CCCEEEEEee
Q 014755 81 ------EWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQ-DGKFAAICTR 152 (419)
Q Consensus 81 ------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~-~~~~l~~~~~ 152 (419)
+..+.+.+|.+-+.++.|.+| ..|++++.|. +..+||+++++... +.+|...|.+++++| +++.+++|+-
T Consensus 130 d~~g~~~v~r~l~gHtgylScC~f~dD-~~ilT~SGD~-TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~c 207 (343)
T KOG0286|consen 130 DAEGNVRVSRELAGHTGYLSCCRFLDD-NHILTGSGDM-TCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGC 207 (343)
T ss_pred cccccceeeeeecCccceeEEEEEcCC-CceEecCCCc-eEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEeccc
Confidence 345668899999999999885 5688888888 99999999999888 999999999999999 8999999988
Q ss_pred cCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEc
Q 014755 153 RDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWS 231 (419)
Q Consensus 153 ~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s 231 (419)
| +..++||++.+..++.+.+|+..|+++.|.|+|..++. ++.|++.++||+ ..+.+..+.......+|++++||
T Consensus 208 D---~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afat--GSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS 282 (343)
T KOG0286|consen 208 D---KSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFAT--GSDDATCRLYDLRADQELAVYSHDSIICGITSVAFS 282 (343)
T ss_pred c---cceeeeeccCcceeEeecccccccceEEEccCCCeeee--cCCCceeEEEeecCCcEEeeeccCcccCCceeEEEc
Confidence 7 89999999999999999999999999999999999998 888999999999 77788888766666789999999
Q ss_pred cCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEE
Q 014755 232 PCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRY 311 (419)
Q Consensus 232 ~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (419)
..|++|++|..|.++.+||.-.++.+..+.
T Consensus 283 ~SGRlLfagy~d~~c~vWDtlk~e~vg~L~-------------------------------------------------- 312 (343)
T KOG0286|consen 283 KSGRLLFAGYDDFTCNVWDTLKGERVGVLA-------------------------------------------------- 312 (343)
T ss_pred ccccEEEeeecCCceeEeeccccceEEEee--------------------------------------------------
Confidence 999999999999999999987776655543
Q ss_pred EeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEee
Q 014755 312 EVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWD 363 (419)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd 363 (419)
+|.+.|+++..+|||.-+++|+.| .+++||.
T Consensus 313 -------------------GHeNRvScl~~s~DG~av~TgSWD--s~lriW~ 343 (343)
T KOG0286|consen 313 -------------------GHENRVSCLGVSPDGMAVATGSWD--STLRIWA 343 (343)
T ss_pred -------------------ccCCeeEEEEECCCCcEEEecchh--HheeecC
Confidence 688899999999999999999999 9999994
No 8
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=3e-43 Score=264.72 Aligned_cols=287 Identities=13% Similarity=0.157 Sum_probs=245.8
Q ss_pred CCEEEEEe-CCeEEEEecCCCcEEEEeecC-cceeEEEEecCCCeEEEEeccCCeEEEEEccCCc--ceeeeecCCccEe
Q 014755 19 ARYIAVAV-DYRLVVRDAHSFKVVQLFSCL-DKISYIEWALDSEYILCGLYKRLMIQAWSLTQPE--WTCKIDEGLAGIA 94 (419)
Q Consensus 19 ~~~la~~~-~~~i~i~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~--~~~~~~~~~~~v~ 94 (419)
.-+||+++ |.+|++|...+|.+..++.|. +.|..++..||++.||+++. ..|++||+++++ ++..+.+|...|+
T Consensus 10 ~viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~--qhvRlyD~~S~np~Pv~t~e~h~kNVt 87 (311)
T KOG0315|consen 10 PVILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGN--QHVRLYDLNSNNPNPVATFEGHTKNVT 87 (311)
T ss_pred ceEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccC--CeeEEEEccCCCCCceeEEeccCCceE
Confidence 35788887 899999999999999999975 57999999999999999985 489999999775 5778899999999
Q ss_pred EEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEe
Q 014755 95 YARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFA 174 (419)
Q Consensus 95 ~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~ 174 (419)
.+.|..+|+.++++++|+ +++|||++...+.+...+..+|+++..+|+...|+++..+ |.|++||+........+.
T Consensus 88 aVgF~~dgrWMyTgseDg-t~kIWdlR~~~~qR~~~~~spVn~vvlhpnQteLis~dqs---g~irvWDl~~~~c~~~li 163 (311)
T KOG0315|consen 88 AVGFQCDGRWMYTGSEDG-TVKIWDLRSLSCQRNYQHNSPVNTVVLHPNQTELISGDQS---GNIRVWDLGENSCTHELI 163 (311)
T ss_pred EEEEeecCeEEEecCCCc-eEEEEeccCcccchhccCCCCcceEEecCCcceEEeecCC---CcEEEEEccCCccccccC
Confidence 999999999999999998 9999999998888877788999999999999999999876 899999999876666554
Q ss_pred c-cccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CC------ceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcE
Q 014755 175 V-DTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DG------RCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTL 246 (419)
Q Consensus 175 ~-~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i 246 (419)
+ ....+.++...|||..++. ....|+.++|++ .. +++.+++.|.. .+..+.+|||+++||+++.|.++
T Consensus 164 Pe~~~~i~sl~v~~dgsml~a--~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~--~il~C~lSPd~k~lat~ssdktv 239 (311)
T KOG0315|consen 164 PEDDTSIQSLTVMPDGSMLAA--ANNKGNCYVWRLLNHQTASELEPVHKFQAHNG--HILRCLLSPDVKYLATCSSDKTV 239 (311)
T ss_pred CCCCcceeeEEEcCCCcEEEE--ecCCccEEEEEccCCCccccceEhhheecccc--eEEEEEECCCCcEEEeecCCceE
Confidence 4 3467999999999999998 666899999999 33 23445566555 89999999999999999999999
Q ss_pred EEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCC
Q 014755 247 RVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPP 326 (419)
Q Consensus 247 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (419)
+||+.++. ...++
T Consensus 240 ~iwn~~~~-~kle~------------------------------------------------------------------ 252 (311)
T KOG0315|consen 240 KIWNTDDF-FKLEL------------------------------------------------------------------ 252 (311)
T ss_pred EEEecCCc-eeeEE------------------------------------------------------------------
Confidence 99998875 11111
Q ss_pred CCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec-ccCCCeeEEEeC
Q 014755 327 TDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL-VQKDPIRAATWD 385 (419)
Q Consensus 327 ~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~-~~~~~v~~~~~s 385 (419)
.+.+|..++.+.+||.||+||++|+.| +.+++|++..++.+... +|.....|++..
T Consensus 253 -~l~gh~rWvWdc~FS~dg~YlvTassd--~~~rlW~~~~~k~v~qy~gh~K~~vc~~ln 309 (311)
T KOG0315|consen 253 -VLTGHQRWVWDCAFSADGEYLVTASSD--HTARLWDLSAGKEVRQYQGHHKAAVCVALN 309 (311)
T ss_pred -EeecCCceEEeeeeccCccEEEecCCC--CceeecccccCceeeecCCcccccEEEEee
Confidence 023688899999999999999999999 99999999999987776 588777777653
No 9
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=4.9e-42 Score=295.92 Aligned_cols=367 Identities=18% Similarity=0.254 Sum_probs=295.7
Q ss_pred ccCeEEcCCCCEEEEEeCCeEEEEecCCCcE--------EE-EeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC
Q 014755 10 TGPSCFSPNARYIAVAVDYRLVVRDAHSFKV--------VQ-LFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP 80 (419)
Q Consensus 10 ~~~~~~s~d~~~la~~~~~~i~i~~~~~~~~--------~~-~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~ 80 (419)
.+++.|||||+++|++..+-+.||....... .+ ..+|...|.++.|+.|.++|++|+.| -++++|.++..
T Consensus 99 v~~i~fSPng~~fav~~gn~lqiw~~P~~~~~~~~pFvl~r~~~g~fddi~si~Ws~DSr~l~~gsrD-~s~rl~~v~~~ 177 (893)
T KOG0291|consen 99 VGAIKFSPNGKFFAVGCGNLLQIWHAPGEIKNEFNPFVLHRTYLGHFDDITSIDWSDDSRLLVTGSRD-LSARLFGVDGN 177 (893)
T ss_pred cceEEECCCCcEEEEEecceeEEEecCcchhcccCcceEeeeecCCccceeEEEeccCCceEEecccc-ceEEEEEeccc
Confidence 4558999999999999999999998764321 12 34588999999999999999999987 69999999866
Q ss_pred cc--eeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC-----------------------CeE---------E
Q 014755 81 EW--TCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN-----------------------TAC---------V 126 (419)
Q Consensus 81 ~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~-----------------------~~~---------~ 126 (419)
+- ...+.+|.+.|.+.-|..+...+++.+.|+ .+.+|.... ++. .
T Consensus 178 k~~~~~~l~gHkd~VvacfF~~~~~~l~tvskdG-~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~ 256 (893)
T KOG0291|consen 178 KNLFTYALNGHKDYVVACFFGANSLDLYTVSKDG-ALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKT 256 (893)
T ss_pred cccceEeccCCCcceEEEEeccCcceEEEEecCc-eEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEE
Confidence 55 566889999999999999999999999998 999997650 110 0
Q ss_pred -E--eccCCC------------------------------------------CeeeEEEccCCCEEEEEeecCCCCeEEE
Q 014755 127 -H--VQSPKH------------------------------------------ASKGVAFTQDGKFAAICTRRDCKDYINL 161 (419)
Q Consensus 127 -~--~~~~~~------------------------------------------~~~~~~~~~~~~~l~~~~~~~~~g~v~i 161 (419)
+ +..... ++..++|+..|.+|+.++.. -|.+.+
T Consensus 257 ~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~k--lgQLlV 334 (893)
T KOG0291|consen 257 KKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSK--LGQLLV 334 (893)
T ss_pred EeeeecccccceeeeeccCCceEEEEEecCCeeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCc--cceEEE
Confidence 0 111112 23345555556666666643 468888
Q ss_pred EeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEE
Q 014755 162 LSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVG 240 (419)
Q Consensus 162 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 240 (419)
|+..+...+...++|...+.+++++|||+++++ +..|++|++||. .|-++.++..|.. .|+.+.|+..|+.+++.
T Consensus 335 weWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaT--G~eDgKVKvWn~~SgfC~vTFteHts--~Vt~v~f~~~g~~llss 410 (893)
T KOG0291|consen 335 WEWQSESYVLKQQGHSDRITSLAYSPDGQLIAT--GAEDGKVKVWNTQSGFCFVTFTEHTS--GVTAVQFTARGNVLLSS 410 (893)
T ss_pred EEeeccceeeeccccccceeeEEECCCCcEEEe--ccCCCcEEEEeccCceEEEEeccCCC--ceEEEEEEecCCEEEEe
Confidence 888888888888899999999999999999999 889999999999 8999999998877 89999999999999999
Q ss_pred EecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCC
Q 014755 241 SYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISL 320 (419)
Q Consensus 241 ~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (419)
+-||+|+.||+...+..+++..+.++. .+.+++...+......+.+.-...+|.+.
T Consensus 411 SLDGtVRAwDlkRYrNfRTft~P~p~Q------------------fscvavD~sGelV~AG~~d~F~IfvWS~q------ 466 (893)
T KOG0291|consen 411 SLDGTVRAWDLKRYRNFRTFTSPEPIQ------------------FSCVAVDPSGELVCAGAQDSFEIFVWSVQ------ 466 (893)
T ss_pred ecCCeEEeeeecccceeeeecCCCcee------------------eeEEEEcCCCCEEEeeccceEEEEEEEee------
Confidence 999999999999999999988665542 23455554444444444444555555543
Q ss_pred CCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCC-CceeecccCCCeeEEEeCCCCCeEEEEeCCCc
Q 014755 321 PFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQ-EPAAILVQKDPIRAATWDPTCTRLVLCTGSSH 399 (419)
Q Consensus 321 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~ 399 (419)
..+.+..+.+|.++|.+++|+|+|..||+++.| .+|++||+-.. .....+.+...+..++|+|||+.|++++-||.
T Consensus 467 -TGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWD--kTVRiW~if~s~~~vEtl~i~sdvl~vsfrPdG~elaVaTldgq 543 (893)
T KOG0291|consen 467 -TGQLLDILSGHEGPVSGLSFSPDGSLLASGSWD--KTVRIWDIFSSSGTVETLEIRSDVLAVSFRPDGKELAVATLDGQ 543 (893)
T ss_pred -cCeeeehhcCCCCcceeeEEccccCeEEecccc--ceEEEEEeeccCceeeeEeeccceeEEEEcCCCCeEEEEEecce
Confidence 445566678999999999999999999999999 99999998764 45566678999999999999999999999999
Q ss_pred EEEeecCCCeEE
Q 014755 400 LYMWTPSGAYCV 411 (419)
Q Consensus 400 i~vw~~~~~~~~ 411 (419)
|.+||++.+..+
T Consensus 544 Itf~d~~~~~q~ 555 (893)
T KOG0291|consen 544 ITFFDIKEAVQV 555 (893)
T ss_pred EEEEEhhhceee
Confidence 999999865443
No 10
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=2.6e-43 Score=265.11 Aligned_cols=280 Identities=13% Similarity=0.216 Sum_probs=238.0
Q ss_pred CeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeE--EE-eccCCCCee
Q 014755 60 EYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTAC--VH-VQSPKHASK 136 (419)
Q Consensus 60 ~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~--~~-~~~~~~~~~ 136 (419)
-+|+++++| .+|++|...+|.+.+++......|..+...|+++.|++++.. .|++||++++.+ +. +.+|...|+
T Consensus 11 viLvsA~YD-hTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~q--hvRlyD~~S~np~Pv~t~e~h~kNVt 87 (311)
T KOG0315|consen 11 VILVSAGYD-HTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGNQ--HVRLYDLNSNNPNPVATFEGHTKNVT 87 (311)
T ss_pred eEEEeccCc-ceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccCC--eeEEEEccCCCCCceeEEeccCCceE
Confidence 468888887 799999999999999998788899999999999999999875 799999998654 33 888999999
Q ss_pred eEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEE
Q 014755 137 GVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLK 215 (419)
Q Consensus 137 ~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~ 215 (419)
++.|..+|++++++++| |+++|||++.....+.++ +..+|+++..+|+...|++ +..+|.|++||+ +..+...
T Consensus 88 aVgF~~dgrWMyTgseD---gt~kIWdlR~~~~qR~~~-~~spVn~vvlhpnQteLis--~dqsg~irvWDl~~~~c~~~ 161 (311)
T KOG0315|consen 88 AVGFQCDGRWMYTGSED---GTVKIWDLRSLSCQRNYQ-HNSPVNTVVLHPNQTELIS--GDQSGNIRVWDLGENSCTHE 161 (311)
T ss_pred EEEEeecCeEEEecCCC---ceEEEEeccCcccchhcc-CCCCcceEEecCCcceEEe--ecCCCcEEEEEccCCccccc
Confidence 99999999999999998 999999999966665555 4599999999999999998 677899999999 5545555
Q ss_pred EeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCcc
Q 014755 216 YQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDF 295 (419)
Q Consensus 216 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (419)
+..... ..|.++...|||.+++.+...|..++|++...+....+
T Consensus 162 liPe~~-~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l----------------------------------- 205 (311)
T KOG0315|consen 162 LIPEDD-TSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASEL----------------------------------- 205 (311)
T ss_pred cCCCCC-cceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccc-----------------------------------
Confidence 544333 48999999999999999999999999998774433332
Q ss_pred ccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCC-Cce-eec
Q 014755 296 IQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQ-EPA-AIL 373 (419)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~-~~~-~~~ 373 (419)
.|+..++.|.+.+..+.+|||+++||+++.| .+++||++++- ++. .+.
T Consensus 206 ----------------------------~P~~k~~ah~~~il~C~lSPd~k~lat~ssd--ktv~iwn~~~~~kle~~l~ 255 (311)
T KOG0315|consen 206 ----------------------------EPVHKFQAHNGHILRCLLSPDVKYLATCSSD--KTVKIWNTDDFFKLELVLT 255 (311)
T ss_pred ----------------------------eEhhheecccceEEEEEECCCCcEEEeecCC--ceEEEEecCCceeeEEEee
Confidence 2333355788899999999999999999999 99999999987 332 333
Q ss_pred ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEEecC
Q 014755 374 VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCVSNP 414 (419)
Q Consensus 374 ~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~ 414 (419)
+|...++..+||.||++|++++.|+.+++|+++.++.++.-
T Consensus 256 gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy 296 (311)
T KOG0315|consen 256 GHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQY 296 (311)
T ss_pred cCCceEEeeeeccCccEEEecCCCCceeecccccCceeeec
Confidence 69999999999999999999999999999999988766543
No 11
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-42 Score=263.79 Aligned_cols=283 Identities=15% Similarity=0.197 Sum_probs=239.5
Q ss_pred eecCcceeEEEEecCC-CeEEEEeccCCeEEEEEccC-----CcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEE
Q 014755 44 FSCLDKISYIEWALDS-EYILCGLYKRLMIQAWSLTQ-----PEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTV 117 (419)
Q Consensus 44 ~~~~~~v~~~~~s~~~-~~l~~~~~~~g~i~iw~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~i 117 (419)
.+|++.|..++..+.+ +.+++++.| .++.+|++.. |...+.+.+|...|..+..++||++.++++.|+ .+++
T Consensus 12 ~gh~d~Vt~la~~~~~~~~l~sasrD-k~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~-~lrl 89 (315)
T KOG0279|consen 12 EGHTDWVTALAIKIKNSDILVSASRD-KTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDG-TLRL 89 (315)
T ss_pred cCCCceEEEEEeecCCCceEEEcccc-eEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccc-eEEE
Confidence 3599999999999975 456666666 6999999863 456788999999999999999999999999998 9999
Q ss_pred EEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEecc-ccceeeeeECCCCCeEEEE
Q 014755 118 WSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVD-TLDLADIEWSPDDSAIVIW 195 (419)
Q Consensus 118 wd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~ 195 (419)
||+.+++..+ +.+|...|.+++|++|.+.+++++.| .+|++|+............. ...|.|+.|+|+.....+.
T Consensus 90 WDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrD---kTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Iv 166 (315)
T KOG0279|consen 90 WDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRD---KTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIV 166 (315)
T ss_pred EEecCCcEEEEEEecCCceEEEEecCCCceeecCCCc---ceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEE
Confidence 9999988777 99999999999999999999999998 89999999865444443333 7889999999995433334
Q ss_pred cCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccce
Q 014755 196 DSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAV 274 (419)
Q Consensus 196 ~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 274 (419)
+++.|+.+++||+ +-+....+.+|.+ .++.+++||||..+++|+.||.+.+||++.++.+..+.
T Consensus 167 s~s~DktvKvWnl~~~~l~~~~~gh~~--~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~------------- 231 (315)
T KOG0279|consen 167 SASWDKTVKVWNLRNCQLRTTFIGHSG--YVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLE------------- 231 (315)
T ss_pred EccCCceEEEEccCCcchhhccccccc--cEEEEEECCCCCEEecCCCCceEEEEEccCCceeEecc-------------
Confidence 4888999999999 6666677777776 89999999999999999999999999999999988775
Q ss_pred eccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCC
Q 014755 275 FKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDS 354 (419)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d 354 (419)
|...|.+++|+|+...|+.+..
T Consensus 232 ---------------------------------------------------------a~~~v~sl~fspnrywL~~at~- 253 (315)
T KOG0279|consen 232 ---------------------------------------------------------AFDIVNSLCFSPNRYWLCAATA- 253 (315)
T ss_pred ---------------------------------------------------------CCCeEeeEEecCCceeEeeccC-
Confidence 5556899999999988888876
Q ss_pred CCceEEEeeccCCCceeecc-----c-----CCCeeEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 355 MPTTLWIWDICRQEPAAILV-----Q-----KDPIRAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 355 ~~~~i~iwd~~~~~~~~~~~-----~-----~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
..|+|||++++.++..+. . .-.-.+++|++||+.|+++-.|+.|++|.+.
T Consensus 254 --~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 254 --TSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQVA 313 (315)
T ss_pred --CceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence 579999999988765442 1 1124578999999999999999999999875
No 12
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=1e-41 Score=278.73 Aligned_cols=312 Identities=13% Similarity=0.239 Sum_probs=271.8
Q ss_pred eEEcCCCC-EEEEEe-CCeEEEEecCC--Cc--EEEEe-----------ecCcceeEEEEecCCCeEEEEeccCCeEEEE
Q 014755 13 SCFSPNAR-YIAVAV-DYRLVVRDAHS--FK--VVQLF-----------SCLDKISYIEWALDSEYILCGLYKRLMIQAW 75 (419)
Q Consensus 13 ~~~s~d~~-~la~~~-~~~i~i~~~~~--~~--~~~~~-----------~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw 75 (419)
++|+|-.. .+|+++ +-+.++|++.. .. ....+ .....|++++|+.+|..||+|+.+ |.++||
T Consensus 184 ~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~LatG~~~-G~~riw 262 (524)
T KOG0273|consen 184 CAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLATGSED-GEARIW 262 (524)
T ss_pred EecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEEeecC-cEEEEE
Confidence 68999666 888887 77799999864 11 11111 123579999999999999999987 999999
Q ss_pred EccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecC
Q 014755 76 SLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRD 154 (419)
Q Consensus 76 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~ 154 (419)
+. +|.++..+..|.++|.++.|+..|.+|++++.|+ ++.+||..+++..+ +..+..+...+.|-.+. .+++.+.|
T Consensus 263 ~~-~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~-ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~-~F~ts~td- 338 (524)
T KOG0273|consen 263 NK-DGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDG-TTILWDAHTGTVKQQFEFHSAPALDVDWQSND-EFATSSTD- 338 (524)
T ss_pred ec-CchhhhhhhccCCceEEEEEcCCCCEEEeccCCc-cEEEEeccCceEEEeeeeccCCccceEEecCc-eEeecCCC-
Confidence 96 4667778999999999999999999999999998 99999999998887 77777776788886554 56666665
Q ss_pred CCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccC
Q 014755 155 CKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPC 233 (419)
Q Consensus 155 ~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~ 233 (419)
+.|+++.+....++.++.+|.++|.++.|+|.|.+|+. ++.|+++++|+. ++.....+..|.. .|..+.|+|+
T Consensus 339 --~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS--~SdD~TlkiWs~~~~~~~~~l~~Hsk--ei~t~~wsp~ 412 (524)
T KOG0273|consen 339 --GCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLAS--CSDDGTLKIWSMGQSNSVHDLQAHSK--EIYTIKWSPT 412 (524)
T ss_pred --ceEEEEEecCCCcceeeecccCceEEEEECCCCceEEE--ecCCCeeEeeecCCCcchhhhhhhcc--ceeeEeecCC
Confidence 89999999999999999999999999999999999998 788999999998 7888888888777 7999999997
Q ss_pred C---------CeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccC
Q 014755 234 G---------QFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATN 304 (419)
Q Consensus 234 ~---------~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (419)
| ..+++++.|++|++||+..+.++..|.
T Consensus 413 g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~------------------------------------------- 449 (524)
T KOG0273|consen 413 GPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLM------------------------------------------- 449 (524)
T ss_pred CCccCCCcCCceEEEeecCCeEEEEEccCCceeEeec-------------------------------------------
Confidence 5 468999999999999999999988863
Q ss_pred CceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecccCCCeeEEEe
Q 014755 305 GHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILVQKDPIRAATW 384 (419)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~ 384 (419)
.|..+|.+++|||+|+|+|+|+.| |.|.||+.+++++.+.++..+.|..++|
T Consensus 450 --------------------------kH~~pVysvafS~~g~ylAsGs~d--g~V~iws~~~~~l~~s~~~~~~Ifel~W 501 (524)
T KOG0273|consen 450 --------------------------KHQEPVYSVAFSPNGRYLASGSLD--GCVHIWSTKTGKLVKSYQGTGGIFELCW 501 (524)
T ss_pred --------------------------cCCCceEEEEecCCCcEEEecCCC--CeeEeccccchheeEeecCCCeEEEEEE
Confidence 377789999999999999999999 9999999999999999988888999999
Q ss_pred CCCCCeEEEEeCCCcEEEeecC
Q 014755 385 DPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 385 s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
+.+|..|..+-.|+.+++-|+.
T Consensus 502 n~~G~kl~~~~sd~~vcvldlr 523 (524)
T KOG0273|consen 502 NAAGDKLGACASDGSVCVLDLR 523 (524)
T ss_pred cCCCCEEEEEecCCCceEEEec
Confidence 9999999999999999998874
No 13
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=100.00 E-value=2.5e-40 Score=274.17 Aligned_cols=322 Identities=17% Similarity=0.263 Sum_probs=255.6
Q ss_pred hcccccCeEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEee----cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC
Q 014755 6 AYKQTGPSCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFS----CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP 80 (419)
Q Consensus 6 ~~~~~~~~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~ 80 (419)
+-....++.|||||+++|+++ |+++.|||-.+++.+..+. |.+.|.+++|+||++.+++++.| .+++|||+.+.
T Consensus 189 HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaD-kt~KIWdVs~~ 267 (603)
T KOG0318|consen 189 HSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSAD-KTIKIWDVSTN 267 (603)
T ss_pred cccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCC-ceEEEEEeecc
Confidence 334455589999999999987 9999999999999888775 99999999999999999999988 59999999877
Q ss_pred cceee-------------------------------------------eecCCccEeEEEECCCCCEEEEEecCCCeEEE
Q 014755 81 EWTCK-------------------------------------------IDEGLAGIAYARWSPDSRHILTTSDFQLRLTV 117 (419)
Q Consensus 81 ~~~~~-------------------------------------------~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~i 117 (419)
+++++ +.+|...|+++..+|++++|++++.|+ .|.-
T Consensus 268 slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG-~I~~ 346 (603)
T KOG0318|consen 268 SLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDG-HINS 346 (603)
T ss_pred ceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCc-eEEE
Confidence 54333 234888899999999999999999998 9999
Q ss_pred EEcCCCeEEEe--ccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCe------------E--------------
Q 014755 118 WSLLNTACVHV--QSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWE------------I-------------- 169 (419)
Q Consensus 118 wd~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~------------~-------------- 169 (419)
|+..++..-++ ..|...+.+++-+..+.++.+ +.| .++++.++.... +
T Consensus 347 W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~-g~D---d~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv 422 (603)
T KOG0318|consen 347 WDSGSGTSDRLAGKGHTNQIKGMAASESGELFTI-GWD---DTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVV 422 (603)
T ss_pred EecCCccccccccccccceEEEEeecCCCcEEEE-ecC---CeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEE
Confidence 99999887765 667788888888776655544 444 478877663211 0
Q ss_pred -----EEEEec--------cccceeeeeECCCCCeEEEEcCCCCceEEEEcCCC-ceEEEEeecCCCCceeEEEEccCCC
Q 014755 170 -----MGVFAV--------DTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDG-RCLLKYQAYESGLGVKSISWSPCGQ 235 (419)
Q Consensus 170 -----~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~v~~~~~s~~~~ 235 (419)
+..++. -.....+++++|++..+++ +..|+++++|.+.| ..........+..+++++++|||+.
T Consensus 423 ~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaV--GG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~ 500 (603)
T KOG0318|consen 423 ACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAV--GGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGA 500 (603)
T ss_pred EecCcEEEEecCCcceeeccccccceEEEcCCCCEEEE--ecccceEEEEEecCCcccceeeeecccCCceEEEECCCCc
Confidence 001111 1234578999999999999 88899999999955 3333333444555999999999999
Q ss_pred eEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEecc
Q 014755 236 FLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVME 315 (419)
Q Consensus 236 ~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (419)
+||++...+.+.+||+.+.+..... |
T Consensus 501 yla~~Da~rkvv~yd~~s~~~~~~~--------------------------------------------------w---- 526 (603)
T KOG0318|consen 501 YLAAGDASRKVVLYDVASREVKTNR--------------------------------------------------W---- 526 (603)
T ss_pred EEEEeccCCcEEEEEcccCceecce--------------------------------------------------e----
Confidence 9999999999999999886651110 0
Q ss_pred CCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCce-eecc-cCCCeeEEEeCCCCCeEEE
Q 014755 316 IPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPA-AILV-QKDPIRAATWDPTCTRLVL 393 (419)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~-~~~~-~~~~v~~~~~s~~~~~l~s 393 (419)
.-|...|.+++|||+..++|+|+-| ..|.||+++..... ...+ |...|+.+.|- |...|++
T Consensus 527 --------------~FHtakI~~~aWsP~n~~vATGSlD--t~Viiysv~kP~~~i~iknAH~~gVn~v~wl-de~tvvS 589 (603)
T KOG0318|consen 527 --------------AFHTAKINCVAWSPNNKLVATGSLD--TNVIIYSVKKPAKHIIIKNAHLGGVNSVAWL-DESTVVS 589 (603)
T ss_pred --------------eeeeeeEEEEEeCCCceEEEecccc--ceEEEEEccChhhheEeccccccCceeEEEe-cCceEEe
Confidence 0288889999999999999999998 99999999875433 3333 99899999997 4557999
Q ss_pred EeCCCcEEEeecC
Q 014755 394 CTGSSHLYMWTPS 406 (419)
Q Consensus 394 ~~~dg~i~vw~~~ 406 (419)
.+.|..|++|++.
T Consensus 590 sG~Da~iK~W~v~ 602 (603)
T KOG0318|consen 590 SGQDANIKVWNVT 602 (603)
T ss_pred ccCcceeEEeccc
Confidence 9999999999974
No 14
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=100.00 E-value=1.2e-40 Score=264.13 Aligned_cols=320 Identities=16% Similarity=0.180 Sum_probs=269.9
Q ss_pred cccccC---eEEcCCCCEEEEEe-CCeEEEEecCCCcEEE-EeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCc
Q 014755 7 YKQTGP---SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQ-LFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPE 81 (419)
Q Consensus 7 ~~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~ 81 (419)
..|... ++.+|+.+++|+|+ |+.-.||++.+++..- ..+|++.|.++.||.||.+||+|..+ |.|+||+..++.
T Consensus 61 ~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdms-G~v~v~~~stg~ 139 (399)
T KOG0296|consen 61 DKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMS-GKVLVFKVSTGG 139 (399)
T ss_pred hhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCC-ccEEEEEcccCc
Confidence 456555 88999999999998 7888999999998665 44699999999999999999999987 899999999998
Q ss_pred ceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCC-eEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEE
Q 014755 82 WTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNT-ACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYIN 160 (419)
Q Consensus 82 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~ 160 (419)
....+...-..+.=+.|+|.+..|++++.|+ .+.+|.+.++ .+..+.+|..++++=.|.|+|+.++++..| |+|+
T Consensus 140 ~~~~~~~e~~dieWl~WHp~a~illAG~~DG-svWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~d---gti~ 215 (399)
T KOG0296|consen 140 EQWKLDQEVEDIEWLKWHPRAHILLAGSTDG-SVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDD---GTII 215 (399)
T ss_pred eEEEeecccCceEEEEecccccEEEeecCCC-cEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecC---ceEE
Confidence 8888876777888999999999999999888 9999999994 444589999999999999999999999987 8999
Q ss_pred EEeccCCeEEEEEecc-ccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEee--------cCC-CCceeEEE
Q 014755 161 LLSCHTWEIMGVFAVD-TLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQA--------YES-GLGVKSIS 229 (419)
Q Consensus 161 i~d~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~--------~~~-~~~v~~~~ 229 (419)
+||+.+++++..+... .....++.++..+..++. ++.++.+++-+. +|+.+....+ +.+ ...|..+.
T Consensus 216 ~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~--g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~ 293 (399)
T KOG0296|consen 216 VWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTK--GNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIP 293 (399)
T ss_pred EEecCCCceeEEecccccCcCCccccccccceeEe--ccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcc
Confidence 9999999998887643 345678888888887776 677888888777 7776665542 112 12344455
Q ss_pred EccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEE
Q 014755 230 WSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKV 309 (419)
Q Consensus 230 ~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (419)
++..=.+.|+|+-||+|.|||+...++...+.
T Consensus 294 ~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~------------------------------------------------ 325 (399)
T KOG0296|consen 294 SSSKLPLAACGSVDGTIAIYDLAASTLRHICE------------------------------------------------ 325 (399)
T ss_pred cccccchhhcccccceEEEEecccchhheecc------------------------------------------------
Confidence 55566788999999999999998877666554
Q ss_pred EEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec-ccCCCeeEEEeCCCC
Q 014755 310 RYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL-VQKDPIRAATWDPTC 388 (419)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~ 388 (419)
|..+|..+.|-+ ..+|++++.+ |.|++||.++|+++..+ +|..+|.+++.+|+.
T Consensus 326 ----------------------he~~V~~l~w~~-t~~l~t~c~~--g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~ 380 (399)
T KOG0296|consen 326 ----------------------HEDGVTKLKWLN-TDYLLTACAN--GKVRQWDARTGQLKFTYTGHQMGILDFALSPQK 380 (399)
T ss_pred ----------------------CCCceEEEEEcC-cchheeeccC--ceEEeeeccccceEEEEecCchheeEEEEcCCC
Confidence 556689999998 7889999988 99999999999998777 799999999999999
Q ss_pred CeEEEEeCCCcEEEeecC
Q 014755 389 TRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 389 ~~l~s~~~dg~i~vw~~~ 406 (419)
++++++|.|++.+|+++.
T Consensus 381 ~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 381 RLVVTVSDDNTALVFEVP 398 (399)
T ss_pred cEEEEecCCCeEEEEecC
Confidence 999999999999999875
No 15
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=100.00 E-value=9e-40 Score=270.92 Aligned_cols=385 Identities=13% Similarity=0.180 Sum_probs=279.6
Q ss_pred hhhhcccccCeEEcCCCCEEEEEeCCe-----EEEEecCCCcEEEEeecCcceeEEEEecCCCe-EEEEeccCCeEEEEE
Q 014755 3 FTEAYKQTGPSCFSPNARYIAVAVDYR-----LVVRDAHSFKVVQLFSCLDKISYIEWALDSEY-ILCGLYKRLMIQAWS 76 (419)
Q Consensus 3 ~~~~~~~~~~~~~s~d~~~la~~~~~~-----i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~~~~g~i~iw~ 76 (419)
|+...|....++|++|+++|++.++|+ +.+||..+ ..-...+|...|.+++|-|...+ +++++ ||++|.+|+
T Consensus 99 f~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~~DSG~-SvGei~GhSr~ins~~~KpsRPfRi~T~s-dDn~v~ffe 176 (603)
T KOG0318|consen 99 FQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFLWDSGN-SVGEITGHSRRINSVDFKPSRPFRIATGS-DDNTVAFFE 176 (603)
T ss_pred eeecccccccceeCCCCcEEEEEecCccceeEEEEecCCC-ccceeeccceeEeeeeccCCCceEEEecc-CCCeEEEee
Confidence 444456666699999999999988654 55676432 22345679999999999998775 55555 568999998
Q ss_pred ccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-ec---cCCCCeeeEEEccCCCEEEEEee
Q 014755 77 LTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQ---SPKHASKGVAFTQDGKFAAICTR 152 (419)
Q Consensus 77 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~---~~~~~~~~~~~~~~~~~l~~~~~ 152 (419)
=..-+....+..|..-|.+++|+|||+++++++.|+ ++.+||-.+++.+. +. .|++.+.+++|+||+..+++++.
T Consensus 177 GPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDg-ki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~Sa 255 (603)
T KOG0318|consen 177 GPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDG-KIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSA 255 (603)
T ss_pred CCCeeeeecccccccceeeEEECCCCCeEEEecCCc-cEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecC
Confidence 766677777888999999999999999999999998 99999999998887 55 78899999999999999999998
Q ss_pred cCCCCeEEEEeccCCeEEEEEeccc---cceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEE
Q 014755 153 RDCKDYINLLSCHTWEIMGVFAVDT---LDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSI 228 (419)
Q Consensus 153 ~~~~g~v~i~d~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~ 228 (419)
| .+++|||+.+.++++++.... ..-..+.|. +..|++ .+.+|.|.++++ +...++.+.+|.. .|+++
T Consensus 256 D---kt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWq--kd~lIt--VSl~G~in~ln~~d~~~~~~i~GHnK--~ITaL 326 (603)
T KOG0318|consen 256 D---KTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQ--KDHLIT--VSLSGTINYLNPSDPSVLKVISGHNK--SITAL 326 (603)
T ss_pred C---ceEEEEEeeccceEEEeecCCchhceEEEEEEe--CCeEEE--EEcCcEEEEecccCCChhheeccccc--ceeEE
Confidence 7 799999999999998886543 233444554 344555 356899999999 7778889998887 89999
Q ss_pred EEccCCCeEEEEEecCcEEEEEcCCceeeeeec--ccccccC-------------CCccceec--------cCC-Ccccc
Q 014755 229 SWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFM--HLSTVRG-------------PCFPAVFK--------EVD-EPLQL 284 (419)
Q Consensus 229 ~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~~~~-------------~~~~~~~~--------~~~-~~~~~ 284 (419)
+.+|++++|++|+.||.|.-|+..++..-+... |...+.. -+..+... ... -+.+.
T Consensus 327 tv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~ 406 (603)
T KOG0318|consen 327 TVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGS 406 (603)
T ss_pred EEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCC
Confidence 999999999999999999999998776433221 2222111 00000000 000 00000
Q ss_pred cceeeeccCc--------------------------------------cccccccccCCceEEEEEeccCCCCCCCCCCC
Q 014755 285 DMSELCLNDD--------------------------------------FIQGNSDATNGHIKVRYEVMEIPISLPFQKPP 326 (419)
Q Consensus 285 ~~~~~~~~~~--------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (419)
....+++.+. ....+....++. ..+|.+.... ....
T Consensus 407 QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgk-vhvysl~g~~-----l~ee 480 (603)
T KOG0318|consen 407 QPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGK-VHVYSLSGDE-----LKEE 480 (603)
T ss_pred CceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccce-EEEEEecCCc-----ccce
Confidence 0001111111 000011111111 2233332211 1222
Q ss_pred CCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec-c-cCCCeeEEEeCCCCCeEEEEeCCCcEEEee
Q 014755 327 TDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL-V-QKDPIRAATWDPTCTRLVLCTGSSHLYMWT 404 (419)
Q Consensus 327 ~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~-~-~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~ 404 (419)
..+..|.++|++++||||+.|||++... +.+.+||+.+.+..... . |...|.+++|+|+.+++|+|+.|-.|.||+
T Consensus 481 ~~~~~h~a~iT~vaySpd~~yla~~Da~--rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiys 558 (603)
T KOG0318|consen 481 AKLLEHRAAITDVAYSPDGAYLAAGDAS--RKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYS 558 (603)
T ss_pred eeeecccCCceEEEECCCCcEEEEeccC--CcEEEEEcccCceecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEE
Confidence 2345699999999999999999999988 99999999998874222 3 999999999999999999999999999999
Q ss_pred cCC
Q 014755 405 PSG 407 (419)
Q Consensus 405 ~~~ 407 (419)
++.
T Consensus 559 v~k 561 (603)
T KOG0318|consen 559 VKK 561 (603)
T ss_pred ccC
Confidence 984
No 16
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=8.2e-42 Score=270.48 Aligned_cols=285 Identities=16% Similarity=0.265 Sum_probs=261.0
Q ss_pred EEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEc
Q 014755 41 VQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSL 120 (419)
Q Consensus 41 ~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~ 120 (419)
.++.+|..+|+.+-|+|+-..+++++.| ++|++||..++++...+++|.+.+..++|+..|+++++++.|- .+++||.
T Consensus 102 ~~l~g~r~~vt~v~~hp~~~~v~~as~d-~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl-~~~LWd~ 179 (406)
T KOG0295|consen 102 QKLAGHRSSVTRVIFHPSEALVVSASED-ATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDL-SAKLWDF 179 (406)
T ss_pred hhhhccccceeeeeeccCceEEEEecCC-ceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCcc-chhheeH
Confidence 3455688899999999999888888866 8999999999999999999999999999999999999999987 7999999
Q ss_pred CC-CeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCC
Q 014755 121 LN-TACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSP 198 (419)
Q Consensus 121 ~~-~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 198 (419)
.+ -++.+ ..+|...+.++.|-|.|.++++++.| .+|+.|++.++-++.++.+|...+..+..+.||..++. ++
T Consensus 180 ~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD---~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As--~s 254 (406)
T KOG0295|consen 180 DTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRD---NTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIAS--CS 254 (406)
T ss_pred HHHHHHHHHhcCcccceeeEEEEecCCeeeecccc---cceeEEecccceeEEeccCchHhEEEEEecCCeeEEEe--cC
Confidence 87 33444 77899999999999999999999998 79999999999999999999999999999999999888 88
Q ss_pred CCceEEEEcC-CCceEEEEeecCCCCceeEEEEccC---------------CCeEEEEEecCcEEEEEcCCceeeeeecc
Q 014755 199 LEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPC---------------GQFLAVGSYDQTLRVLNHLTWKTFAEFMH 262 (419)
Q Consensus 199 ~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~---------------~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 262 (419)
.+.++++|-. ++++...+..|++ +|.+++|.|. ++++.+++.|++|++||+.++.++.++.
T Consensus 255 ~dqtl~vW~~~t~~~k~~lR~hEh--~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~- 331 (406)
T KOG0295|consen 255 NDQTLRVWVVATKQCKAELREHEH--PVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLV- 331 (406)
T ss_pred CCceEEEEEeccchhhhhhhcccc--ceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEe-
Confidence 8999999999 8878888888888 8999999763 2589999999999999999999988864
Q ss_pred cccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEc
Q 014755 263 LSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWS 342 (419)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 342 (419)
+|..+|..++|+
T Consensus 332 --------------------------------------------------------------------ghdnwVr~~af~ 343 (406)
T KOG0295|consen 332 --------------------------------------------------------------------GHDNWVRGVAFS 343 (406)
T ss_pred --------------------------------------------------------------------cccceeeeeEEc
Confidence 688899999999
Q ss_pred cCCeEEEEecCCCCceEEEeeccCCCceeecc-cCCCeeEEEeCCCCCeEEEEeCCCcEEEeec
Q 014755 343 SDSQYICTRNDSMPTTLWIWDICRQEPAAILV-QKDPIRAATWDPTCTRLVLCTGSSHLYMWTP 405 (419)
Q Consensus 343 ~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 405 (419)
|.|+||+++.+| +++++||++++++...+. |..-++++.|+.+..++++|+-|.++++|.-
T Consensus 344 p~Gkyi~ScaDD--ktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 344 PGGKYILSCADD--KTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 405 (406)
T ss_pred CCCeEEEEEecC--CcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEeccccceeeeeec
Confidence 999999999999 999999999999988875 9999999999999999999999999999974
No 17
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=8e-40 Score=282.33 Aligned_cols=321 Identities=15% Similarity=0.272 Sum_probs=279.3
Q ss_pred CeEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecC
Q 014755 12 PSCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEG 89 (419)
Q Consensus 12 ~~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~ 89 (419)
+.+|++.-+.||++- .|...+|.+....+++.+. ...+|..++|+..|.+||.|+..-|.+-||+..+...+.+.++|
T Consensus 270 aa~fH~~t~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH 349 (893)
T KOG0291|consen 270 AAAFHKGTNLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGH 349 (893)
T ss_pred eeeccCCceEEEEEecCCeeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeecccc
Confidence 477999999999995 7778899999999998877 45789999999999999999987789999999999888889999
Q ss_pred CccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCe
Q 014755 90 LAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWE 168 (419)
Q Consensus 90 ~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~ 168 (419)
...+++++++|||+++++|++|+ .|++||..++-+.. +..|...++.+.|+..|+.+++.+-| |+|+.||+...+
T Consensus 350 ~~~i~~l~YSpDgq~iaTG~eDg-KVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLD---GtVRAwDlkRYr 425 (893)
T KOG0291|consen 350 SDRITSLAYSPDGQLIATGAEDG-KVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLD---GTVRAWDLKRYR 425 (893)
T ss_pred ccceeeEEECCCCcEEEeccCCC-cEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecC---CeEEeeeecccc
Confidence 99999999999999999999998 99999999999988 99999999999999999999999998 999999999988
Q ss_pred EEEEEeccc-cceeeeeECCCCCeEEEEcCCCC-ceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCc
Q 014755 169 IMGVFAVDT-LDLADIEWSPDDSAIVIWDSPLE-YKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQT 245 (419)
Q Consensus 169 ~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~~~-~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~ 245 (419)
..+++.... ....|++..|.|..++. +..| -.|++|+. +|+.+..+.+|+. +|.+++|+|++..|++++.|.+
T Consensus 426 NfRTft~P~p~QfscvavD~sGelV~A--G~~d~F~IfvWS~qTGqllDiLsGHEg--PVs~l~f~~~~~~LaS~SWDkT 501 (893)
T KOG0291|consen 426 NFRTFTSPEPIQFSCVAVDPSGELVCA--GAQDSFEIFVWSVQTGQLLDILSGHEG--PVSGLSFSPDGSLLASGSWDKT 501 (893)
T ss_pred eeeeecCCCceeeeEEEEcCCCCEEEe--eccceEEEEEEEeecCeeeehhcCCCC--cceeeEEccccCeEEeccccce
Confidence 888887643 55788999999988877 4444 68999999 9999999999887 9999999999999999999999
Q ss_pred EEEEEcCCc-eeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCC
Q 014755 246 LRVLNHLTW-KTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQK 324 (419)
Q Consensus 246 i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (419)
||+||+-.. ..+.+++
T Consensus 502 VRiW~if~s~~~vEtl~--------------------------------------------------------------- 518 (893)
T KOG0291|consen 502 VRIWDIFSSSGTVETLE--------------------------------------------------------------- 518 (893)
T ss_pred EEEEEeeccCceeeeEe---------------------------------------------------------------
Confidence 999998543 2233332
Q ss_pred CCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec---------------------ccCCCeeEEE
Q 014755 325 PPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL---------------------VQKDPIRAAT 383 (419)
Q Consensus 325 ~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~---------------------~~~~~v~~~~ 383 (419)
+...+..++|+|||+-||+++-| |.|.+||...+.....+ ......+.++
T Consensus 519 -------i~sdvl~vsfrPdG~elaVaTld--gqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ 589 (893)
T KOG0291|consen 519 -------IRSDVLAVSFRPDGKELAVATLD--GQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTIC 589 (893)
T ss_pred -------eccceeEEEEcCCCCeEEEEEec--ceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEE
Confidence 33447899999999999999998 99999998764433111 1235689999
Q ss_pred eCCCCCeEEEEeCCCcEEEeecCCCeEEe
Q 014755 384 WDPTCTRLVLCTGSSHLYMWTPSGAYCVS 412 (419)
Q Consensus 384 ~s~~~~~l~s~~~dg~i~vw~~~~~~~~~ 412 (419)
+|+||..+++|+....|++|++.++-+++
T Consensus 590 ySaDG~~IlAgG~sn~iCiY~v~~~vllk 618 (893)
T KOG0291|consen 590 YSADGKCILAGGESNSICIYDVPEGVLLK 618 (893)
T ss_pred EcCCCCEEEecCCcccEEEEECchhheee
Confidence 99999999999999999999999876654
No 18
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=8.7e-41 Score=287.58 Aligned_cols=376 Identities=14% Similarity=0.179 Sum_probs=280.1
Q ss_pred cccC---eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCe--EEEEeccCCeEEEEEccCCc
Q 014755 9 QTGP---SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEY--ILCGLYKRLMIQAWSLTQPE 81 (419)
Q Consensus 9 ~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~--l~~~~~~~g~i~iw~~~~~~ 81 (419)
|.++ ++|+|.|.+||+|+ |+.+++||+..+.+...+. |.+.|.++.|.|+-.+ |++|. +|+++++||+.+..
T Consensus 104 He~Pvi~ma~~~~g~LlAtggaD~~v~VWdi~~~~~th~fkG~gGvVssl~F~~~~~~~lL~sg~-~D~~v~vwnl~~~~ 182 (775)
T KOG0319|consen 104 HEAPVITMAFDPTGTLLATGGADGRVKVWDIKNGYCTHSFKGHGGVVSSLLFHPHWNRWLLASGA-TDGTVRVWNLNDKR 182 (775)
T ss_pred cCCCeEEEEEcCCCceEEeccccceEEEEEeeCCEEEEEecCCCceEEEEEeCCccchhheeecC-CCceEEEEEcccCc
Confidence 5555 79999999999998 9999999999999888765 8999999999997544 55665 45999999999654
Q ss_pred c-eeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccC-----CCEEEEEeecCC
Q 014755 82 W-TCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQD-----GKFAAICTRRDC 155 (419)
Q Consensus 82 ~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~~~~~~ 155 (419)
. ...+..|.+.|++++|++|+..+++++.|+ .+.+||+.+-+..+.......+.++.+-++ +.++.+++.+
T Consensus 183 tcl~~~~~H~S~vtsL~~~~d~~~~ls~~RDk-vi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~-- 259 (775)
T KOG0319|consen 183 TCLHTMILHKSAVTSLAFSEDSLELLSVGRDK-VIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAGGS-- 259 (775)
T ss_pred hHHHHHHhhhhheeeeeeccCCceEEEeccCc-EEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEEEecCC--
Confidence 4 777889999999999999999999999999 999999976555543344445566666555 5577777765
Q ss_pred CCeEEEEeccCCe-------------------------------------------EEEEEeccccceeeeeE-CCCCCe
Q 014755 156 KDYINLLSCHTWE-------------------------------------------IMGVFAVDTLDLADIEW-SPDDSA 191 (419)
Q Consensus 156 ~g~v~i~d~~~~~-------------------------------------------~~~~~~~~~~~v~~~~~-~~~~~~ 191 (419)
|.+++||.++++ ..+.+-+....|..+.| .|+.++
T Consensus 260 -g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~ 338 (775)
T KOG0319|consen 260 -GVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESH 338 (775)
T ss_pred -ceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccce
Confidence 677777776543 22223334455666665 466778
Q ss_pred EEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCcee----eeeec-ccccc
Q 014755 192 IVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKT----FAEFM-HLSTV 266 (419)
Q Consensus 192 l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~----~~~~~-~~~~~ 266 (419)
+++ ++....+++|+..+...+.+.+|.. .|.++....+|.+|++++.|.++++|.++.+.. +.... |...+
T Consensus 339 laV--ATNs~~lr~y~~~~~~c~ii~GH~e--~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~sv 414 (775)
T KOG0319|consen 339 LAV--ATNSPELRLYTLPTSYCQIIPGHTE--AVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSV 414 (775)
T ss_pred EEE--EeCCCceEEEecCCCceEEEeCchh--heeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhccccccc
Confidence 888 5567889999986655567777776 899999777889999999999999998854332 22222 33333
Q ss_pred cCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccC--CCCCCCCCCCCCCCCCCcceEEEEEccC
Q 014755 267 RGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEI--PISLPFQKPPTDKPNPKQGIGLMSWSSD 344 (419)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 344 (419)
. .++++ ..................|.+... ....+.+........|...|++++++|+
T Consensus 415 g----ava~~----------------~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~n 474 (775)
T KOG0319|consen 415 G----AVAGS----------------KLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPN 474 (775)
T ss_pred c----eeeec----------------ccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCC
Confidence 1 12221 111112222233345555655541 1111222223345679999999999999
Q ss_pred CeEEEEecCCCCceEEEeeccCCCceeec-ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEEecCC
Q 014755 345 SQYICTRNDSMPTTLWIWDICRQEPAAIL-VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCVSNPL 415 (419)
Q Consensus 345 g~~l~~~~~d~~~~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~ 415 (419)
.+++|+|+.| .+.+||+++..++..++ +|...|++|.|+|..+.|+++|.|++|+||.+++..++++-.
T Consensus 475 dkLiAT~SqD--ktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~e 544 (775)
T KOG0319|consen 475 DKLIATGSQD--KTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFE 544 (775)
T ss_pred CceEEecccc--cceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeec
Confidence 9999999999 99999999988888777 699999999999999999999999999999999999987654
No 19
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=2.5e-42 Score=277.29 Aligned_cols=280 Identities=16% Similarity=0.330 Sum_probs=250.7
Q ss_pred CcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEE
Q 014755 47 LDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACV 126 (419)
Q Consensus 47 ~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~ 126 (419)
..+|..+.|.|+|+.|++|+.. |.+.+|+...-.....+..|..+|.++.|++++.+++++..++ .|++|+..-....
T Consensus 96 kc~V~~v~WtPeGRRLltgs~S-GEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG-~iKyWqpnmnnVk 173 (464)
T KOG0284|consen 96 KCPVNVVRWTPEGRRLLTGSQS-GEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGG-MIKYWQPNMNNVK 173 (464)
T ss_pred ccceeeEEEcCCCceeEeeccc-ccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCc-eEEecccchhhhH
Confidence 4589999999999999999976 9999999877666667889999999999999999999998877 9999999876666
Q ss_pred EeccC-CCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEE
Q 014755 127 HVQSP-KHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLI 205 (419)
Q Consensus 127 ~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~ 205 (419)
.+..+ ...|++++|+|+...+++++.| |+|+|||....+..+.+.+|.-.|.+++|+|...++++ ++.|+.|++
T Consensus 174 ~~~ahh~eaIRdlafSpnDskF~t~SdD---g~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLias--gskDnlVKl 248 (464)
T KOG0284|consen 174 IIQAHHAEAIRDLAFSPNDSKFLTCSDD---GTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIAS--GSKDNLVKL 248 (464)
T ss_pred HhhHhhhhhhheeccCCCCceeEEecCC---CeEEEEeccCCchhheeccCCCCcceeccCCccceeEE--ccCCceeEe
Confidence 54444 4889999999999999999987 89999999999999999999999999999999999998 788999999
Q ss_pred EcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccc
Q 014755 206 YSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQL 284 (419)
Q Consensus 206 ~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (419)
||. +|+++.++..|.+ .|..+.|+|++++|+++|.|..+++||+++.+.+..++
T Consensus 249 WDprSg~cl~tlh~HKn--tVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r----------------------- 303 (464)
T KOG0284|consen 249 WDPRSGSCLATLHGHKN--TVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYR----------------------- 303 (464)
T ss_pred ecCCCcchhhhhhhccc--eEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhh-----------------------
Confidence 999 9999999988877 89999999999999999999999999999777666654
Q ss_pred cceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccC-CeEEEEecCCCCceEEEee
Q 014755 285 DMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSD-SQYICTRNDSMPTTLWIWD 363 (419)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~~~~~d~~~~i~iwd 363 (419)
+|...|++++|+|- ..+|.+|+.| |.|..|.
T Consensus 304 ----------------------------------------------~Hkkdv~~~~WhP~~~~lftsgg~D--gsvvh~~ 335 (464)
T KOG0284|consen 304 ----------------------------------------------GHKKDVTSLTWHPLNESLFTSGGSD--GSVVHWV 335 (464)
T ss_pred ----------------------------------------------cchhhheeeccccccccceeeccCC--CceEEEe
Confidence 57778899999995 5678888888 9999999
Q ss_pred ccCCCceeec--ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 364 ICRQEPAAIL--VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 364 ~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
+...+++..+ .|...|++++|+|-|..|++|+.|.++++|.-.
T Consensus 336 v~~~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~ 380 (464)
T KOG0284|consen 336 VGLEEPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRN 380 (464)
T ss_pred ccccccccCCCcccccceeeeeccccceeEeecCCCcceeeeccC
Confidence 9866666655 499999999999999999999999999999765
No 20
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-40 Score=251.69 Aligned_cols=257 Identities=16% Similarity=0.224 Sum_probs=225.7
Q ss_pred ceeeeecCCccEeEEEECCCC-CEEEEEecCCCeEEEEEcCC-----CeEEE-eccCCCCeeeEEEccCCCEEEEEeecC
Q 014755 82 WTCKIDEGLAGIAYARWSPDS-RHILTTSDFQLRLTVWSLLN-----TACVH-VQSPKHASKGVAFTQDGKFAAICTRRD 154 (419)
Q Consensus 82 ~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~~i~iwd~~~-----~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~ 154 (419)
....+.+|.+.|+.++..+.+ +.+++++.|. .+.+|++.. |.+++ +.+|.+.+..+..++||++.++++.|
T Consensus 7 l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk-~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD- 84 (315)
T KOG0279|consen 7 LRGTLEGHTDWVTALAIKIKNSDILVSASRDK-TIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWD- 84 (315)
T ss_pred eeeeecCCCceEEEEEeecCCCceEEEcccce-EEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEecccc-
Confidence 345688999999999998874 5567777887 999999875 55666 89999999999999999999999998
Q ss_pred CCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccC-
Q 014755 155 CKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPC- 233 (419)
Q Consensus 155 ~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~- 233 (419)
+.+++||+.+++..+.+.+|...|.+++|+||.+.++. ++.|.+|.+|+.-|.+..++....+...|.++.|+|+
T Consensus 85 --~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivS--GSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~ 160 (315)
T KOG0279|consen 85 --GTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVS--GSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNE 160 (315)
T ss_pred --ceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeec--CCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCC
Confidence 89999999999999999999999999999999999998 8889999999998888877776654669999999998
Q ss_pred -CCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEE
Q 014755 234 -GQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYE 312 (419)
Q Consensus 234 -~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (419)
..+|++++.|++|++||+++.+....
T Consensus 161 ~~p~Ivs~s~DktvKvWnl~~~~l~~~----------------------------------------------------- 187 (315)
T KOG0279|consen 161 SNPIIVSASWDKTVKVWNLRNCQLRTT----------------------------------------------------- 187 (315)
T ss_pred CCcEEEEccCCceEEEEccCCcchhhc-----------------------------------------------------
Confidence 67999999999999999987554443
Q ss_pred eccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecccCCCeeEEEeCCCCCeEE
Q 014755 313 VMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCTRLV 392 (419)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 392 (419)
+.+|.+.++.+++||||.+.++|+.| |.+.+||++.++.+..++|...|.+++|+|+.-.|+
T Consensus 188 ----------------~~gh~~~v~t~~vSpDGslcasGgkd--g~~~LwdL~~~k~lysl~a~~~v~sl~fspnrywL~ 249 (315)
T KOG0279|consen 188 ----------------FIGHSGYVNTVTVSPDGSLCASGGKD--GEAMLWDLNEGKNLYSLEAFDIVNSLCFSPNRYWLC 249 (315)
T ss_pred ----------------cccccccEEEEEECCCCCEEecCCCC--ceEEEEEccCCceeEeccCCCeEeeEEecCCceeEe
Confidence 34688899999999999999999999 999999999999999999999999999999987777
Q ss_pred EEeCCCcEEEeecCCCeEEecCCC
Q 014755 393 LCTGSSHLYMWTPSGAYCVSNPLP 416 (419)
Q Consensus 393 s~~~dg~i~vw~~~~~~~~~~~~~ 416 (419)
.+. +..|+|||++++.++..-.+
T Consensus 250 ~at-~~sIkIwdl~~~~~v~~l~~ 272 (315)
T KOG0279|consen 250 AAT-ATSIKIWDLESKAVVEELKL 272 (315)
T ss_pred ecc-CCceEEEeccchhhhhhccc
Confidence 555 45699999998887654433
No 21
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=2.4e-39 Score=264.84 Aligned_cols=293 Identities=15% Similarity=0.265 Sum_probs=248.8
Q ss_pred EEeecCcceeEEEEecCCC-eEEEEeccCCeEEEEEccCC--ccee--ee----------ecCCccEeEEEECCCCCEEE
Q 014755 42 QLFSCLDKISYIEWALDSE-YILCGLYKRLMIQAWSLTQP--EWTC--KI----------DEGLAGIAYARWSPDSRHIL 106 (419)
Q Consensus 42 ~~~~~~~~v~~~~~s~~~~-~l~~~~~~~g~i~iw~~~~~--~~~~--~~----------~~~~~~v~~~~~~~~~~~l~ 106 (419)
+...|+.+|.+.+|+|-.. .+++++.+ .+.++|++... .... .+ ......|++++|+.+|..|+
T Consensus 173 kvl~~~~~V~~~~WnP~~~~llasg~~~-s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~La 251 (524)
T KOG0273|consen 173 KVLRHESEVFICAWNPLRDGLLASGSGD-STARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLA 251 (524)
T ss_pred eeccCCCceEEEecCchhhhhhhccCCc-cceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEE
Confidence 4556999999999999766 78888876 68999999742 1100 01 01235699999999999999
Q ss_pred EEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeEC
Q 014755 107 TTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWS 186 (419)
Q Consensus 107 ~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~ 186 (419)
+++.++ .+++|+...+....+..|+.+|.++.|+.+|.+|++++.| +++.+||..+++..+.+..|..+...+.|-
T Consensus 252 tG~~~G-~~riw~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD---~ttilwd~~~g~~~q~f~~~s~~~lDVdW~ 327 (524)
T KOG0273|consen 252 TGSEDG-EARIWNKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVD---GTTILWDAHTGTVKQQFEFHSAPALDVDWQ 327 (524)
T ss_pred EeecCc-EEEEEecCchhhhhhhccCCceEEEEEcCCCCEEEeccCC---ccEEEEeccCceEEEeeeeccCCccceEEe
Confidence 999988 9999999888777799999999999999999999999987 899999999999999999998887888887
Q ss_pred CCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeeccccc
Q 014755 187 PDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLST 265 (419)
Q Consensus 187 ~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 265 (419)
.+..+ ++ .+.|+.|+++.+ ...+..++.+|.+ .|.++.|+|.|.+|++++.|+++++|..........+.
T Consensus 328 ~~~~F-~t--s~td~~i~V~kv~~~~P~~t~~GH~g--~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~---- 398 (524)
T KOG0273|consen 328 SNDEF-AT--SSTDGCIHVCKVGEDRPVKTFIGHHG--EVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQ---- 398 (524)
T ss_pred cCceE-ee--cCCCceEEEEEecCCCcceeeecccC--ceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhh----
Confidence 66554 44 577999999999 6677888888666 89999999999999999999999999977655554443
Q ss_pred ccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCC
Q 014755 266 VRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDS 345 (419)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g 345 (419)
+|...|..+.|||+|
T Consensus 399 -----------------------------------------------------------------~Hskei~t~~wsp~g 413 (524)
T KOG0273|consen 399 -----------------------------------------------------------------AHSKEIYTIKWSPTG 413 (524)
T ss_pred -----------------------------------------------------------------hhccceeeEeecCCC
Confidence 466677888888864
Q ss_pred ---------eEEEEecCCCCceEEEeeccCCCceeec-ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEEecCC
Q 014755 346 ---------QYICTRNDSMPTTLWIWDICRQEPAAIL-VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCVSNPL 415 (419)
Q Consensus 346 ---------~~l~~~~~d~~~~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~ 415 (419)
..+++++.| ++|++||+..+.++..+ .|..+|++++|+|+|++||+|+.||.|.+|+..++++++...
T Consensus 414 ~v~~n~~~~~~l~sas~d--stV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~ 491 (524)
T KOG0273|consen 414 PVTSNPNMNLMLASASFD--STVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQ 491 (524)
T ss_pred CccCCCcCCceEEEeecC--CeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccchheeEeec
Confidence 478888888 99999999999988777 799999999999999999999999999999999999887543
No 22
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.5e-39 Score=261.89 Aligned_cols=283 Identities=15% Similarity=0.273 Sum_probs=234.5
Q ss_pred eecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCc---ceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEc
Q 014755 44 FSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPE---WTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSL 120 (419)
Q Consensus 44 ~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~ 120 (419)
..|.+.|+-+.||++|++||+++.| .+..+|++.... ...++.+|..+|..+.||||.++|++|+.+. .+.+||+
T Consensus 221 ~~htdEVWfl~FS~nGkyLAsaSkD-~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e-~~~lwDv 298 (519)
T KOG0293|consen 221 QDHTDEVWFLQFSHNGKYLASASKD-STAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDE-VLSLWDV 298 (519)
T ss_pred hhCCCcEEEEEEcCCCeeEeeccCC-ceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchH-heeeccC
Confidence 3599999999999999999999988 699999986553 4677889999999999999999999999988 8999999
Q ss_pred CCCeEEEeccC--CCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccc-cceeeeeECCCCCeEEEEcC
Q 014755 121 LNTACVHVQSP--KHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDT-LDLADIEWSPDDSAIVIWDS 197 (419)
Q Consensus 121 ~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~ 197 (419)
.+|.......+ ...+.+++|.|||..+++|+.| +++..||++. +.....++-. ..|.+++.++||+++++ .
T Consensus 299 ~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~d---r~i~~wdlDg-n~~~~W~gvr~~~v~dlait~Dgk~vl~--v 372 (519)
T KOG0293|consen 299 DTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPD---RTIIMWDLDG-NILGNWEGVRDPKVHDLAITYDGKYVLL--V 372 (519)
T ss_pred CcchhhhhcccCcCCCcceeEEccCCceeEecCCC---CcEEEecCCc-chhhcccccccceeEEEEEcCCCcEEEE--E
Confidence 99998884333 4778999999999999999987 8999999984 4444444432 45899999999999998 4
Q ss_pred CCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeec-ccccccCCCcccee
Q 014755 198 PLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFM-HLSTVRGPCFPAVF 275 (419)
Q Consensus 198 ~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~ 275 (419)
..|..|++|+. +......+..+ + +++++..|.+++++++.-.+..+++||++..+.++.+. |..
T Consensus 373 ~~d~~i~l~~~e~~~dr~lise~-~--~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq----------- 438 (519)
T KOG0293|consen 373 TVDKKIRLYNREARVDRGLISEE-Q--PITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQ----------- 438 (519)
T ss_pred ecccceeeechhhhhhhcccccc-C--ceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccc-----------
Confidence 57999999999 33333333333 3 79999999999999999999999999999877766654 211
Q ss_pred ccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEcc-CCeEEEEecCC
Q 014755 276 KEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSS-DSQYICTRNDS 354 (419)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~d 354 (419)
...+-.-+|-. +..++|+|++|
T Consensus 439 ---------------------------------------------------------~~fiIrSCFgg~~~~fiaSGSED 461 (519)
T KOG0293|consen 439 ---------------------------------------------------------GHFIIRSCFGGGNDKFIASGSED 461 (519)
T ss_pred ---------------------------------------------------------cceEEEeccCCCCcceEEecCCC
Confidence 11233345543 55899999999
Q ss_pred CCceEEEeeccCCCceeec-ccCCCeeEEEeCCCCC-eEEEEeCCCcEEEeecCC
Q 014755 355 MPTTLWIWDICRQEPAAIL-VQKDPIRAATWDPTCT-RLVLCTGSSHLYMWTPSG 407 (419)
Q Consensus 355 ~~~~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~-~l~s~~~dg~i~vw~~~~ 407 (419)
+.|+||+..+++++..+ ||...|++|+|+|... ++||+|+||+|+||.+..
T Consensus 462 --~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~ 514 (519)
T KOG0293|consen 462 --SKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSD 514 (519)
T ss_pred --ceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence 99999999999999877 6999999999999876 889999999999998863
No 23
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=100.00 E-value=1.8e-38 Score=245.43 Aligned_cols=286 Identities=15% Similarity=0.234 Sum_probs=241.5
Q ss_pred EeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC-cceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcC
Q 014755 43 LFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP-EWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLL 121 (419)
Q Consensus 43 ~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~ 121 (419)
+.+|++.|+.+.|+|+|.+||+|+.| ..|.+|++... +-...+++|.+.|..+.|.+|++.+++++.|+ +++.||++
T Consensus 43 l~gh~geI~~~~F~P~gs~~aSgG~D-r~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk-~v~~wD~~ 120 (338)
T KOG0265|consen 43 LPGHKGEIYTIKFHPDGSCFASGGSD-RAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDK-TVRGWDAE 120 (338)
T ss_pred cCCCcceEEEEEECCCCCeEeecCCc-ceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCc-eEEEEecc
Confidence 45699999999999999999999998 59999996543 44567889999999999999999999999999 99999999
Q ss_pred CCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCC
Q 014755 122 NTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLE 200 (419)
Q Consensus 122 ~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~ 200 (419)
+|+..+ ...|..-++++.-+.-|..++..+.| ++++++||+++.+.++.+.. ..+++++.|..++..+.. +.-|
T Consensus 121 tG~~~rk~k~h~~~vNs~~p~rrg~~lv~Sgsd--D~t~kl~D~R~k~~~~t~~~-kyqltAv~f~d~s~qv~s--ggId 195 (338)
T KOG0265|consen 121 TGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSD--DGTLKLWDIRKKEAIKTFEN-KYQLTAVGFKDTSDQVIS--GGID 195 (338)
T ss_pred cceeeehhccccceeeecCccccCCeEEEecCC--CceEEEEeecccchhhcccc-ceeEEEEEecccccceee--cccc
Confidence 999988 88888888888866667666665555 38999999998887776643 478999999999999988 7889
Q ss_pred ceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCcee----eeeec-ccccccCCCccce
Q 014755 201 YKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKT----FAEFM-HLSTVRGPCFPAV 274 (419)
Q Consensus 201 ~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~----~~~~~-~~~~~~~~~~~~~ 274 (419)
+.|++||+ .+..+..+.+|.+ .|+.+..+|+|.++.+-+.|.++++||++-..+ +..+. +...
T Consensus 196 n~ikvWd~r~~d~~~~lsGh~D--tIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hn--------- 264 (338)
T KOG0265|consen 196 NDIKVWDLRKNDGLYTLSGHAD--TITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHN--------- 264 (338)
T ss_pred CceeeeccccCcceEEeecccC--ceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhh---------
Confidence 99999999 8888899999888 899999999999999999999999999864322 22222 1100
Q ss_pred eccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCC
Q 014755 275 FKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDS 354 (419)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d 354 (419)
-.......+|||+++++.+|+.|
T Consensus 265 ---------------------------------------------------------feknlL~cswsp~~~~i~ags~d 287 (338)
T KOG0265|consen 265 ---------------------------------------------------------FEKNLLKCSWSPNGTKITAGSAD 287 (338)
T ss_pred ---------------------------------------------------------hhhhcceeeccCCCCcccccccc
Confidence 01123567899999999999999
Q ss_pred CCceEEEeeccCCCceeec-ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeec
Q 014755 355 MPTTLWIWDICRQEPAAIL-VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTP 405 (419)
Q Consensus 355 ~~~~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 405 (419)
..+++||.....++..+ ||.+.|.+++|+|...+|.+++.|.+|++=++
T Consensus 288 --r~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~lgei 337 (338)
T KOG0265|consen 288 --RFVYVWDTTSRRILYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIYLGEI 337 (338)
T ss_pred --ceEEEeecccccEEEEcCCcceeEEEeeecCCCcEEEEeccCceeEeecc
Confidence 99999999987777666 69999999999999999999999999987443
No 24
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=1.4e-40 Score=267.24 Aligned_cols=273 Identities=14% Similarity=0.257 Sum_probs=236.7
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCCCcEEE-EeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCC
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQ-LFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGL 90 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~ 90 (419)
|.|.|+|+.|++|+ .|.+.+|+..+..... ...|..+|.++.|+++|.++++|..+ |.|++|+..-... ..+..|.
T Consensus 102 v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~g-G~iKyWqpnmnnV-k~~~ahh 179 (464)
T KOG0284|consen 102 VRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKG-GMIKYWQPNMNNV-KIIQAHH 179 (464)
T ss_pred EEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCC-ceEEecccchhhh-HHhhHhh
Confidence 78999999999998 7889999975543333 23599999999999999999999866 9999999875543 3444554
Q ss_pred -ccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCe
Q 014755 91 -AGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWE 168 (419)
Q Consensus 91 -~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~ 168 (419)
..|++++|+|+...++++++|+ +|+|||....+... +.+|...|.+++|+|....+++++.| ..|++||.++++
T Consensus 180 ~eaIRdlafSpnDskF~t~SdDg-~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskD---nlVKlWDprSg~ 255 (464)
T KOG0284|consen 180 AEAIRDLAFSPNDSKFLTCSDDG-TIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKD---NLVKLWDPRSGS 255 (464)
T ss_pred hhhhheeccCCCCceeEEecCCC-eEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCC---ceeEeecCCCcc
Confidence 8899999999999999999988 99999998866655 89999999999999999999999987 699999999999
Q ss_pred EEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccC-CCeEEEEEecCcE
Q 014755 169 IMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPC-GQFLAVGSYDQTL 246 (419)
Q Consensus 169 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~d~~i 246 (419)
++..+..|...|..+.|+|++++|++ ++.|..+++||+ .-+.+..+++|.. .|++++|+|- ..++.+|+.||.|
T Consensus 256 cl~tlh~HKntVl~~~f~~n~N~Llt--~skD~~~kv~DiR~mkEl~~~r~Hkk--dv~~~~WhP~~~~lftsgg~Dgsv 331 (464)
T KOG0284|consen 256 CLATLHGHKNTVLAVKFNPNGNWLLT--GSKDQSCKVFDIRTMKELFTYRGHKK--DVTSLTWHPLNESLFTSGGSDGSV 331 (464)
T ss_pred hhhhhhhccceEEEEEEcCCCCeeEE--ccCCceEEEEehhHhHHHHHhhcchh--hheeeccccccccceeeccCCCce
Confidence 99999999999999999999999999 888999999999 5778888888777 8999999995 4688899999999
Q ss_pred EEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCC
Q 014755 247 RVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPP 326 (419)
Q Consensus 247 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (419)
..|.+...+++..+.
T Consensus 332 vh~~v~~~~p~~~i~----------------------------------------------------------------- 346 (464)
T KOG0284|consen 332 VHWVVGLEEPLGEIP----------------------------------------------------------------- 346 (464)
T ss_pred EEEeccccccccCCC-----------------------------------------------------------------
Confidence 999987434333322
Q ss_pred CCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeecc
Q 014755 327 TDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDIC 365 (419)
Q Consensus 327 ~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~ 365 (419)
.+|...|.+++|+|-|.+|++|+.| .++++|...
T Consensus 347 ---~AHd~~iwsl~~hPlGhil~tgsnd--~t~rfw~r~ 380 (464)
T KOG0284|consen 347 ---PAHDGEIWSLAYHPLGHILATGSND--RTVRFWTRN 380 (464)
T ss_pred ---cccccceeeeeccccceeEeecCCC--cceeeeccC
Confidence 2588899999999999999999999 999999753
No 25
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=1.2e-39 Score=283.09 Aligned_cols=270 Identities=18% Similarity=0.331 Sum_probs=230.2
Q ss_pred CcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCe-E
Q 014755 47 LDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTA-C 125 (419)
Q Consensus 47 ~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~-~ 125 (419)
...+.|..|++|+..||.|..| ..|++|.+...++ +.++... .+. .+=+.+.|- .+.+.|-.... .
T Consensus 378 ~~~v~ca~fSddssmlA~Gf~d-S~i~~~Sl~p~kl-~~lk~~~-~l~---------~~d~~sad~-~~~~~D~~~~~~~ 444 (707)
T KOG0263|consen 378 YQGVTCAEFSDDSSMLACGFVD-SSVRVWSLTPKKL-KKLKDAS-DLS---------NIDTESADV-DVDMLDDDSSGTS 444 (707)
T ss_pred CCcceeEeecCCcchhhccccc-cEEEEEecchhhh-ccccchh-hhc---------cccccccch-hhhhccccCCcee
Confidence 4579999999999999888877 7999999876532 2332211 111 111222232 34555555543 4
Q ss_pred EEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEE
Q 014755 126 VHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLI 205 (419)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~ 205 (419)
..+.+|.++|..+.|+|+.++|++++.| +++++|.++++..+..+.+|..+|..+.|+|.|-++++ ++.|++.++
T Consensus 445 ~~L~GH~GPVyg~sFsPd~rfLlScSED---~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFat--as~D~tArL 519 (707)
T KOG0263|consen 445 RTLYGHSGPVYGCSFSPDRRFLLSCSED---SSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFAT--ASHDQTARL 519 (707)
T ss_pred EEeecCCCceeeeeecccccceeeccCC---cceeeeecccceeEEEecCCCcceeeEEecCCceEEEe--cCCCceeee
Confidence 4489999999999999999999999997 89999999999999999999999999999999999998 788999999
Q ss_pred EcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccc
Q 014755 206 YSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQL 284 (419)
Q Consensus 206 ~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (419)
|.. ...+++.+.+|.. .|.|+.|+|+..|+++||.|.+||+||+.+|..++.|.
T Consensus 520 Ws~d~~~PlRifaghls--DV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~----------------------- 574 (707)
T KOG0263|consen 520 WSTDHNKPLRIFAGHLS--DVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFT----------------------- 574 (707)
T ss_pred eecccCCchhhhccccc--ccceEEECCcccccccCCCCceEEEEEcCCCcEEEEec-----------------------
Confidence 999 7778888888777 79999999999999999999999999999998888764
Q ss_pred cceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeec
Q 014755 285 DMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDI 364 (419)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~ 364 (419)
+|.++|++++|||+|++||+|+.| +.|.|||+
T Consensus 575 ----------------------------------------------GH~~~V~al~~Sp~Gr~LaSg~ed--~~I~iWDl 606 (707)
T KOG0263|consen 575 ----------------------------------------------GHKGPVTALAFSPCGRYLASGDED--GLIKIWDL 606 (707)
T ss_pred ----------------------------------------------CCCCceEEEEEcCCCceEeecccC--CcEEEEEc
Confidence 689999999999999999999999 99999999
Q ss_pred cCCCceeec-ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCC
Q 014755 365 CRQEPAAIL-VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSG 407 (419)
Q Consensus 365 ~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 407 (419)
.+++++..+ +|.+.|.++.||.||..||+++.|.+|++||+..
T Consensus 607 ~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~ 650 (707)
T KOG0263|consen 607 ANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTK 650 (707)
T ss_pred CCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchh
Confidence 998877555 7999999999999999999999999999999973
No 26
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=100.00 E-value=2.6e-37 Score=264.09 Aligned_cols=280 Identities=19% Similarity=0.354 Sum_probs=246.0
Q ss_pred ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCe
Q 014755 45 SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTA 124 (419)
Q Consensus 45 ~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~ 124 (419)
+|.++|.+++|+|++++|++++.+ |.+++|++.+++....+..|...+..+.|+|+++.+++++.++ .+++|++.+++
T Consensus 7 ~h~~~i~~~~~~~~~~~l~~~~~~-g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~-~i~i~~~~~~~ 84 (289)
T cd00200 7 GHTGGVTCVAFSPDGKLLATGSGD-GTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDK-TIRLWDLETGE 84 (289)
T ss_pred ccCCCEEEEEEcCCCCEEEEeecC-cEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCC-eEEEEEcCccc
Confidence 589999999999999999999876 8999999999888888888989999999999999999999877 99999999866
Q ss_pred EEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceE
Q 014755 125 CVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKV 203 (419)
Q Consensus 125 ~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i 203 (419)
... +..+...+.++.|+++++++++++.+ +.+.+||+++++....+..|...+.++.|+|++.++++ +..++.+
T Consensus 85 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~--~~~~~~i 159 (289)
T cd00200 85 CVRTLTGHTSYVSSVAFSPDGRILSSSSRD---KTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVAS--SSQDGTI 159 (289)
T ss_pred ceEEEeccCCcEEEEEEcCCCCEEEEecCC---CeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEE--EcCCCcE
Confidence 555 67777789999999998888887755 89999999999988888888889999999999888887 4458999
Q ss_pred EEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcc
Q 014755 204 LIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPL 282 (419)
Q Consensus 204 ~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (419)
++||+ .++.+..+..+.. .+.++.|+|+++.+++++.++.|++||+.+++.+..+.
T Consensus 160 ~i~d~~~~~~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~--------------------- 216 (289)
T cd00200 160 KLWDLRTGKCVATLTGHTG--EVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLR--------------------- 216 (289)
T ss_pred EEEEccccccceeEecCcc--ccceEEECCCcCEEEEecCCCcEEEEECCCCceecchh---------------------
Confidence 99999 6777777776554 79999999999999999999999999998866655542
Q ss_pred cccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEe
Q 014755 283 QLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIW 362 (419)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iw 362 (419)
.|...+.+++|+|++.++++++.+ +.|++|
T Consensus 217 ------------------------------------------------~~~~~i~~~~~~~~~~~~~~~~~~--~~i~i~ 246 (289)
T cd00200 217 ------------------------------------------------GHENGVNSVAFSPDGYLLASGSED--GTIRVW 246 (289)
T ss_pred ------------------------------------------------hcCCceEEEEEcCCCcEEEEEcCC--CcEEEE
Confidence 245568999999999999998877 999999
Q ss_pred eccCCCceeec-ccCCCeeEEEeCCCCCeEEEEeCCCcEEEee
Q 014755 363 DICRQEPAAIL-VQKDPIRAATWDPTCTRLVLCTGSSHLYMWT 404 (419)
Q Consensus 363 d~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~ 404 (419)
++.+++....+ .|...|.+++|+|++++|++++.||.+++|+
T Consensus 247 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 247 DLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred EcCCceeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 99988776666 4888999999999999999999999999996
No 27
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=7.9e-39 Score=253.63 Aligned_cols=272 Identities=17% Similarity=0.307 Sum_probs=247.7
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEe-ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccC-CcceeeeecC
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLF-SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQ-PEWTCKIDEG 89 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~-~~~~~~~~~~ 89 (419)
+-|.|+--..++++ +.+|++||..++++...+ +|.+.+.+++|+..|++|++++.| -.+++||.++ .++++.+.+|
T Consensus 114 v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsD-l~~~LWd~~~~~~c~ks~~gh 192 (406)
T KOG0295|consen 114 VIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSD-LSAKLWDFDTFFRCIKSLIGH 192 (406)
T ss_pred eeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCc-cchhheeHHHHHHHHHHhcCc
Confidence 67899999999997 788999999999997754 599999999999999999999987 4699999987 4667778899
Q ss_pred CccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCe
Q 014755 90 LAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWE 168 (419)
Q Consensus 90 ~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~ 168 (419)
...|.+++|-|.|.++++++.|. +|+.|++.++.++. +.+|...+..++.+.||..+++++.| .+|++|-+.+++
T Consensus 193 ~h~vS~V~f~P~gd~ilS~srD~-tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~d---qtl~vW~~~t~~ 268 (406)
T KOG0295|consen 193 EHGVSSVFFLPLGDHILSCSRDN-TIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSND---QTLRVWVVATKQ 268 (406)
T ss_pred ccceeeEEEEecCCeeeeccccc-ceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCC---ceEEEEEeccch
Confidence 99999999999999999999998 99999999999999 89999999999999999999999987 799999999999
Q ss_pred EEEEEeccccceeeeeECCCC---------------CeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEcc
Q 014755 169 IMGVFAVDTLDLADIEWSPDD---------------SAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSP 232 (419)
Q Consensus 169 ~~~~~~~~~~~v~~~~~~~~~---------------~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~ 232 (419)
+...++.|+.++.+++|.|.. +++.. ++.|++|++||+ +|.++.++.+|.. .|..++|+|
T Consensus 269 ~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s--~SrDktIk~wdv~tg~cL~tL~ghdn--wVr~~af~p 344 (406)
T KOG0295|consen 269 CKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGS--GSRDKTIKIWDVSTGMCLFTLVGHDN--WVRGVAFSP 344 (406)
T ss_pred hhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEe--ecccceEEEEeccCCeEEEEEecccc--eeeeeEEcC
Confidence 999999999999999998742 34555 778999999999 9999999999888 999999999
Q ss_pred CCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEE
Q 014755 233 CGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYE 312 (419)
Q Consensus 233 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (419)
.|+||+++.+|+++++||++++++++.++
T Consensus 345 ~Gkyi~ScaDDktlrvwdl~~~~cmk~~~--------------------------------------------------- 373 (406)
T KOG0295|consen 345 GGKYILSCADDKTLRVWDLKNLQCMKTLE--------------------------------------------------- 373 (406)
T ss_pred CCeEEEEEecCCcEEEEEeccceeeeccC---------------------------------------------------
Confidence 99999999999999999999999988865
Q ss_pred eccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeec
Q 014755 313 VMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDI 364 (419)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~ 364 (419)
.|...++++.|+.+..++++|+-| ..+++|.-
T Consensus 374 ------------------ah~hfvt~lDfh~~~p~VvTGsVd--qt~KvwEc 405 (406)
T KOG0295|consen 374 ------------------AHEHFVTSLDFHKTAPYVVTGSVD--QTVKVWEC 405 (406)
T ss_pred ------------------CCcceeEEEecCCCCceEEecccc--ceeeeeec
Confidence 366678999999999999999999 99999964
No 28
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=9.5e-38 Score=278.29 Aligned_cols=285 Identities=19% Similarity=0.339 Sum_probs=248.7
Q ss_pred cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCc--ceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEc-CC
Q 014755 46 CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPE--WTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSL-LN 122 (419)
Q Consensus 46 ~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~-~~ 122 (419)
+...|.++.|+|+|+.+++++.+ +.+++|+..+.+ ..+.+.+|...|.+++|+|+++++++++.|. +|++||+ ..
T Consensus 158 ~~~sv~~~~fs~~g~~l~~~~~~-~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~-tiriwd~~~~ 235 (456)
T KOG0266|consen 158 ECPSVTCVDFSPDGRALAAASSD-GLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDK-TLRIWDLKDD 235 (456)
T ss_pred ccCceEEEEEcCCCCeEEEccCC-CcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCc-eEEEeeccCC
Confidence 36789999999999999999887 799999997777 6777788999999999999999999999988 9999999 44
Q ss_pred CeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCc
Q 014755 123 TACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEY 201 (419)
Q Consensus 123 ~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~ 201 (419)
+..++ +.+|...+++++|+|+++++++|+.| ++|++||+++++++..+..|...|.+++|++++..++. ++.|+
T Consensus 236 ~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D---~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s--~s~d~ 310 (456)
T KOG0266|consen 236 GRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDD---GTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVS--ASYDG 310 (456)
T ss_pred CeEEEEecCCCCceEEEEecCCCCEEEEecCC---CcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEE--cCCCc
Confidence 56666 88999999999999999999999987 89999999999999999999999999999999999999 56799
Q ss_pred eEEEEcC-CCc--eEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeec-ccccccCCCccceecc
Q 014755 202 KVLIYSP-DGR--CLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFM-HLSTVRGPCFPAVFKE 277 (419)
Q Consensus 202 ~i~~~d~-~~~--~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 277 (419)
.|++||+ ++. +...+..+.....++++.|+|+++++++++.|+.+++||+..++....+. |...+
T Consensus 311 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~----------- 379 (456)
T KOG0266|consen 311 TIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLV----------- 379 (456)
T ss_pred cEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcc-----------
Confidence 9999999 666 35566655542258999999999999999999999999999988877765 22110
Q ss_pred CCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCc
Q 014755 278 VDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPT 357 (419)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~ 357 (419)
..+.+..+++.++++++|+.| +
T Consensus 380 --------------------------------------------------------~~~~~~~~~~~~~~i~sg~~d--~ 401 (456)
T KOG0266|consen 380 --------------------------------------------------------RCIFSPTLSTGGKLIYSGSED--G 401 (456)
T ss_pred --------------------------------------------------------eeEecccccCCCCeEEEEeCC--c
Confidence 124455568999999999999 9
Q ss_pred eEEEeeccCCCceeec-cc-CCCeeEEEeCCCCCeEEEEe--CCCcEEEeecC
Q 014755 358 TLWIWDICRQEPAAIL-VQ-KDPIRAATWDPTCTRLVLCT--GSSHLYMWTPS 406 (419)
Q Consensus 358 ~i~iwd~~~~~~~~~~-~~-~~~v~~~~~s~~~~~l~s~~--~dg~i~vw~~~ 406 (419)
.|++||+.++..+..+ +| ...+..+.++|..+++++++ .|+.+++|..+
T Consensus 402 ~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 402 SVYVWDSSSGGILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred eEEEEeCCccchhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence 9999999988776666 58 88999999999999999998 79999999865
No 29
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=100.00 E-value=3.8e-38 Score=249.38 Aligned_cols=280 Identities=14% Similarity=0.202 Sum_probs=251.8
Q ss_pred ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCe
Q 014755 45 SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTA 124 (419)
Q Consensus 45 ~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~ 124 (419)
+|.+.|.|+++.|...++++|+.| ++++|||+.++++..++.+|...|..+++|+-..|+++++.|+ .|+.||++..+
T Consensus 149 gHlgWVr~vavdP~n~wf~tgs~D-rtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk-~VKCwDLe~nk 226 (460)
T KOG0285|consen 149 GHLGWVRSVAVDPGNEWFATGSAD-RTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDK-QVKCWDLEYNK 226 (460)
T ss_pred hccceEEEEeeCCCceeEEecCCC-ceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCC-eeEEEechhhh
Confidence 489999999999999999999988 7999999999999999999999999999999999999999998 99999999999
Q ss_pred EEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceE
Q 014755 125 CVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKV 203 (419)
Q Consensus 125 ~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i 203 (419)
.++ +.+|-..|.+++.+|.-..|++++.| .++++||+++...+..+.+|..+|..+.+.|-...++. ++.|++|
T Consensus 227 vIR~YhGHlS~V~~L~lhPTldvl~t~grD---st~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit--~S~D~tv 301 (460)
T KOG0285|consen 227 VIRHYHGHLSGVYCLDLHPTLDVLVTGGRD---STIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVIT--GSHDSTV 301 (460)
T ss_pred hHHHhccccceeEEEeccccceeEEecCCc---ceEEEeeecccceEEEecCCCCcceeEEeecCCCceEE--ecCCceE
Confidence 888 88999999999999999999999997 79999999999999999999999999999998888888 8889999
Q ss_pred EEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcc
Q 014755 204 LIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPL 282 (419)
Q Consensus 204 ~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (419)
++||+ .|+....+..|.. .|.+++.+|....+|+++.| .|+-|++..|..+..+.
T Consensus 302 rlWDl~agkt~~tlt~hkk--svral~lhP~e~~fASas~d-nik~w~~p~g~f~~nls--------------------- 357 (460)
T KOG0285|consen 302 RLWDLRAGKTMITLTHHKK--SVRALCLHPKENLFASASPD-NIKQWKLPEGEFLQNLS--------------------- 357 (460)
T ss_pred EEeeeccCceeEeeecccc--eeeEEecCCchhhhhccCCc-cceeccCCccchhhccc---------------------
Confidence 99999 8988888887776 89999999999999999987 69999988877655532
Q ss_pred cccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEe
Q 014755 283 QLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIW 362 (419)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iw 362 (419)
+|...|++++...|| ++++|++. |.+.+|
T Consensus 358 ------------------------------------------------gh~~iintl~~nsD~-v~~~G~dn--g~~~fw 386 (460)
T KOG0285|consen 358 ------------------------------------------------GHNAIINTLSVNSDG-VLVSGGDN--GSIMFW 386 (460)
T ss_pred ------------------------------------------------cccceeeeeeeccCc-eEEEcCCc--eEEEEE
Confidence 577778999998887 56788877 999999
Q ss_pred eccCCCceeec---------ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 363 DICRQEPAAIL---------VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 363 d~~~~~~~~~~---------~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
|.+++-..+.. .....|++.+|...|..|++|..|.+|++|.-.
T Consensus 387 dwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keD 439 (460)
T KOG0285|consen 387 DWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKED 439 (460)
T ss_pred ecCcCcccccccccccCCccccccceeEEeecccCceEEeccCCcceEEEecc
Confidence 99997644333 133568999999999999999999999999765
No 30
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=1.5e-38 Score=276.37 Aligned_cols=268 Identities=17% Similarity=0.275 Sum_probs=232.8
Q ss_pred cccCeEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeee
Q 014755 9 QTGPSCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKID 87 (419)
Q Consensus 9 ~~~~~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~ 87 (419)
-..+..||+|+++||.|- +..|++|.+...++.++. +...+. .+=+.+.| -.+.+.|.......+.+.
T Consensus 380 ~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk-~~~~l~---------~~d~~sad-~~~~~~D~~~~~~~~~L~ 448 (707)
T KOG0263|consen 380 GVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLK-DASDLS---------NIDTESAD-VDVDMLDDDSSGTSRTLY 448 (707)
T ss_pred cceeEeecCCcchhhccccccEEEEEecchhhhcccc-chhhhc---------cccccccc-hhhhhccccCCceeEEee
Confidence 344478999999999996 888999999876544332 222111 11123333 346677777777777799
Q ss_pred cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC
Q 014755 88 EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT 166 (419)
Q Consensus 88 ~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~ 166 (419)
+|.++|....|+|+.++|+++++|. ++++|.+.+..+.. ..+|..+|..+.|+|.|-++|+++.| ++-++|....
T Consensus 449 GH~GPVyg~sFsPd~rfLlScSED~-svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D---~tArLWs~d~ 524 (707)
T KOG0263|consen 449 GHSGPVYGCSFSPDRRFLLSCSEDS-SVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHD---QTARLWSTDH 524 (707)
T ss_pred cCCCceeeeeecccccceeeccCCc-ceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCC---ceeeeeeccc
Confidence 9999999999999999999999998 99999999988877 88999999999999999999999887 8999999999
Q ss_pred CeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCc
Q 014755 167 WEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQT 245 (419)
Q Consensus 167 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~ 245 (419)
..+.+.+.+|...|.|+.|+|+..+++. ++.|.++++||. +|..++.+.+|.. +|.+++|||+|++|++|+.|+.
T Consensus 525 ~~PlRifaghlsDV~cv~FHPNs~Y~aT--GSsD~tVRlWDv~~G~~VRiF~GH~~--~V~al~~Sp~Gr~LaSg~ed~~ 600 (707)
T KOG0263|consen 525 NKPLRIFAGHLSDVDCVSFHPNSNYVAT--GSSDRTVRLWDVSTGNSVRIFTGHKG--PVTALAFSPCGRYLASGDEDGL 600 (707)
T ss_pred CCchhhhcccccccceEEECCccccccc--CCCCceEEEEEcCCCcEEEEecCCCC--ceEEEEEcCCCceEeecccCCc
Confidence 9999999999999999999999999999 888999999999 9999999998777 8999999999999999999999
Q ss_pred EEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCC
Q 014755 246 LRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKP 325 (419)
Q Consensus 246 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (419)
|++||+.+++.+..+.
T Consensus 601 I~iWDl~~~~~v~~l~---------------------------------------------------------------- 616 (707)
T KOG0263|consen 601 IKIWDLANGSLVKQLK---------------------------------------------------------------- 616 (707)
T ss_pred EEEEEcCCCcchhhhh----------------------------------------------------------------
Confidence 9999999988877764
Q ss_pred CCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccC
Q 014755 326 PTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICR 366 (419)
Q Consensus 326 ~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~ 366 (419)
+|.+.|.++.||.||..||+|+.| ++|++||+..
T Consensus 617 -----~Ht~ti~SlsFS~dg~vLasgg~D--nsV~lWD~~~ 650 (707)
T KOG0263|consen 617 -----GHTGTIYSLSFSRDGNVLASGGAD--NSVRLWDLTK 650 (707)
T ss_pred -----cccCceeEEEEecCCCEEEecCCC--CeEEEEEchh
Confidence 477789999999999999999999 9999999865
No 31
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=100.00 E-value=2.6e-36 Score=230.20 Aligned_cols=278 Identities=16% Similarity=0.314 Sum_probs=230.7
Q ss_pred EeecCcceeEEEEecC-CCeEEEEeccCCeEEEEEccCCc---ceeee-ecCCccEeEEEECCCCCEEEEEecCCCeEEE
Q 014755 43 LFSCLDKISYIEWALD-SEYILCGLYKRLMIQAWSLTQPE---WTCKI-DEGLAGIAYARWSPDSRHILTTSDFQLRLTV 117 (419)
Q Consensus 43 ~~~~~~~v~~~~~s~~-~~~l~~~~~~~g~i~iw~~~~~~---~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~i 117 (419)
+-+|.+.+..++|+|- |..||+++.| ..|++|+...+. +...+ .+|+..|.+++|+|.|++|++++-|. ++.|
T Consensus 10 ~~gh~~r~W~~awhp~~g~ilAscg~D-k~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~-t~~I 87 (312)
T KOG0645|consen 10 LSGHKDRVWSVAWHPGKGVILASCGTD-KAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDA-TVVI 87 (312)
T ss_pred ecCCCCcEEEEEeccCCceEEEeecCC-ceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccc-eEEE
Confidence 3458899999999998 8899999987 699999998532 22222 35888999999999999999999998 9999
Q ss_pred EEcCCCeEE--E-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC---CeEEEEEeccccceeeeeECCCCCe
Q 014755 118 WSLLNTACV--H-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT---WEIMGVFAVDTLDLADIEWSPDDSA 191 (419)
Q Consensus 118 wd~~~~~~~--~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~---~~~~~~~~~~~~~v~~~~~~~~~~~ 191 (419)
|.-..++.. . +.+|...|.+++|+++|++||+++.| +.|.||.+.. .++...++.|...|..+.|+|...+
T Consensus 88 w~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRD---KSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dl 164 (312)
T KOG0645|consen 88 WKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRD---KSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDL 164 (312)
T ss_pred eecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCC---CeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcce
Confidence 988765443 3 88999999999999999999999998 7999999975 3567788999999999999999999
Q ss_pred EEEEcCCCCceEEEEcC----CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeeccccccc
Q 014755 192 IVIWDSPLEYKVLIYSP----DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVR 267 (419)
Q Consensus 192 l~~~~~~~~~~i~~~d~----~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 267 (419)
|+. ++.|++|++|+- +-.+.+++.++.. .|.+++|+|.|..|++++.|++++||...+. +.
T Consensus 165 L~S--~SYDnTIk~~~~~~dddW~c~~tl~g~~~--TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~-----~~------ 229 (312)
T KOG0645|consen 165 LFS--CSYDNTIKVYRDEDDDDWECVQTLDGHEN--TVWSLAFDNIGSRLVSCSDDGTVSIWRLYTD-----LS------ 229 (312)
T ss_pred eEE--eccCCeEEEEeecCCCCeeEEEEecCccc--eEEEEEecCCCceEEEecCCcceEeeeeccC-----cc------
Confidence 998 788999999987 2356788887776 8999999999999999999999999986421 10
Q ss_pred CCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeE
Q 014755 268 GPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQY 347 (419)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 347 (419)
..|...+..++|. ...
T Consensus 230 --------------------------------------------------------------~~~sr~~Y~v~W~--~~~ 245 (312)
T KOG0645|consen 230 --------------------------------------------------------------GMHSRALYDVPWD--NGV 245 (312)
T ss_pred --------------------------------------------------------------hhcccceEeeeec--ccc
Confidence 0266678889998 457
Q ss_pred EEEecCCCCceEEEeeccCCC------cee-ec-ccCCCeeEEEeCCC-CCeEEEEeCCCcEEEeecC
Q 014755 348 ICTRNDSMPTTLWIWDICRQE------PAA-IL-VQKDPIRAATWDPT-CTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 348 l~~~~~d~~~~i~iwd~~~~~------~~~-~~-~~~~~v~~~~~s~~-~~~l~s~~~dg~i~vw~~~ 406 (419)
||+++.| +.|++|.-...- ++. .. .|...|++++|+|. ..+|+++++||.|++|.+.
T Consensus 246 IaS~ggD--~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 246 IASGGGD--DAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred eEeccCC--CEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 8999998 999999866531 111 11 38889999999995 5689999999999999875
No 32
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=100.00 E-value=2e-37 Score=239.62 Aligned_cols=281 Identities=13% Similarity=0.167 Sum_probs=243.0
Q ss_pred hcccccC---eEEcCCCCEEEEEe-CCeEEEEecCCCc--EEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccC
Q 014755 6 AYKQTGP---SCFSPNARYIAVAV-DYRLVVRDAHSFK--VVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQ 79 (419)
Q Consensus 6 ~~~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~ 79 (419)
..+|.+. +.|+|+|..||+|+ |..|.+|+..... .....+|.+.|..+.|.+|++.+++++.| .+++.||+++
T Consensus 43 l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtD-k~v~~wD~~t 121 (338)
T KOG0265|consen 43 LPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTD-KTVRGWDAET 121 (338)
T ss_pred cCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCC-ceEEEEeccc
Confidence 3566665 78999999999998 8889999965322 22344799999999999999999999987 6999999999
Q ss_pred CcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeE
Q 014755 80 PEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYI 159 (419)
Q Consensus 80 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v 159 (419)
|+..++.+.|..-|..+.-+.-|..++..+.+++++++||+++.+.++....+.+++++.|..++..+.+|+-| +.|
T Consensus 122 G~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~s~qv~sggId---n~i 198 (338)
T KOG0265|consen 122 GKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDTSDQVISGGID---NDI 198 (338)
T ss_pred ceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEecccccceeecccc---Cce
Confidence 99999999999999999866677777776666669999999999998877788899999999999999999987 799
Q ss_pred EEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-----CCceEEEEeecCCCC--ceeEEEEcc
Q 014755 160 NLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-----DGRCLLKYQAYESGL--GVKSISWSP 232 (419)
Q Consensus 160 ~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-----~~~~~~~~~~~~~~~--~v~~~~~s~ 232 (419)
++||++..+....+.+|...|+.+..+|+|.++.. .+.|.++++||. ...++..+.++.+.. ....++|+|
T Consensus 199 kvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~lls--nsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp 276 (338)
T KOG0265|consen 199 KVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLS--NSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSP 276 (338)
T ss_pred eeeccccCcceEEeecccCceeeEEeccCCCcccc--ccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccC
Confidence 99999999999999999999999999999999988 788999999998 334577888776643 345789999
Q ss_pred CCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEE
Q 014755 233 CGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYE 312 (419)
Q Consensus 233 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (419)
+++.+.+|+.|..+++||..+...+..+
T Consensus 277 ~~~~i~ags~dr~vyvwd~~~r~~lykl---------------------------------------------------- 304 (338)
T KOG0265|consen 277 NGTKITAGSADRFVYVWDTTSRRILYKL---------------------------------------------------- 304 (338)
T ss_pred CCCccccccccceEEEeecccccEEEEc----------------------------------------------------
Confidence 9999999999999999998876665553
Q ss_pred eccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEee
Q 014755 313 VMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWD 363 (419)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd 363 (419)
++|.+.|.++.|+|...+|.+++.| .+|++=.
T Consensus 305 -----------------pGh~gsvn~~~Fhp~e~iils~~sd--k~i~lge 336 (338)
T KOG0265|consen 305 -----------------PGHYGSVNEVDFHPTEPIILSCSSD--KTIYLGE 336 (338)
T ss_pred -----------------CCcceeEEEeeecCCCcEEEEeccC--ceeEeec
Confidence 4799999999999999999999999 9988743
No 33
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=100.00 E-value=4.1e-37 Score=244.07 Aligned_cols=304 Identities=13% Similarity=0.143 Sum_probs=262.9
Q ss_pred cEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEE
Q 014755 39 KVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVW 118 (419)
Q Consensus 39 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iw 118 (419)
.......|.++|.+++.+|+.+++++|+.|| .-.+|++.+++....+.+|+..|+++.|+.+|.+|++++.++ .|++|
T Consensus 56 S~~tF~~H~~svFavsl~P~~~l~aTGGgDD-~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG-~v~v~ 133 (399)
T KOG0296|consen 56 SLVTFDKHTDSVFAVSLHPNNNLVATGGGDD-LAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSG-KVLVF 133 (399)
T ss_pred ceeehhhcCCceEEEEeCCCCceEEecCCCc-eEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCc-cEEEE
Confidence 3444556999999999999999999999885 999999999999999999999999999999999999999987 99999
Q ss_pred EcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcC
Q 014755 119 SLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDS 197 (419)
Q Consensus 119 d~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 197 (419)
+..++.... +...-..+.=+.|+|.+..|+.|+.| |.+.+|.+.++...+.+.+|..++++-.|.|+|+.++. +
T Consensus 134 ~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~D---GsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~t--g 208 (399)
T KOG0296|consen 134 KVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTD---GSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILT--G 208 (399)
T ss_pred EcccCceEEEeecccCceEEEEecccccEEEeecCC---CcEEEEECCCcceeeEecCCCCCcccccccCCCceEEE--E
Confidence 999988777 55566778889999999999999987 89999999998889999999999999999999999998 6
Q ss_pred CCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceec
Q 014755 198 PLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFK 276 (419)
Q Consensus 198 ~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (419)
..|++|++|++ +++++..+....+ ....++.++..+..++.|+.++.+++-+..+|+.+.......+.
T Consensus 209 y~dgti~~Wn~ktg~p~~~~~~~e~-~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~---------- 277 (399)
T KOG0296|consen 209 YDDGTIIVWNPKTGQPLHKITQAEG-LELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPE---------- 277 (399)
T ss_pred ecCceEEEEecCCCceeEEeccccc-CcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCcc----------
Confidence 66999999999 9999998876553 36788999999999999999999999999988877665421110
Q ss_pred cCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCC---cceEEEEEccCCeEEEEecC
Q 014755 277 EVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPK---QGIGLMSWSSDSQYICTRND 353 (419)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~s~~g~~l~~~~~ 353 (419)
..+.+. ..|.++.+|..=.+.|+|+-
T Consensus 278 ---------------------------------------------------l~~~~e~~~esve~~~~ss~lpL~A~G~v 306 (399)
T KOG0296|consen 278 ---------------------------------------------------LKPSQEELDESVESIPSSSKLPLAACGSV 306 (399)
T ss_pred ---------------------------------------------------ccccchhhhhhhhhcccccccchhhcccc
Confidence 001122 23455556667778899998
Q ss_pred CCCceEEEeeccCCCceeecccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEEecC
Q 014755 354 SMPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCVSNP 414 (419)
Q Consensus 354 d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~ 414 (419)
| |+|.|||+...+++....|...|+.+.|-+ ..+|++++.||.|+.||..+|+++...
T Consensus 307 d--G~i~iyD~a~~~~R~~c~he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y 364 (399)
T KOG0296|consen 307 D--GTIAIYDLAASTLRHICEHEDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQLKFTY 364 (399)
T ss_pred c--ceEEEEecccchhheeccCCCceEEEEEcC-cchheeeccCceEEeeeccccceEEEE
Confidence 8 999999999999999999999999999998 778999999999999999999987654
No 34
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=100.00 E-value=1e-36 Score=232.38 Aligned_cols=284 Identities=12% Similarity=0.254 Sum_probs=228.7
Q ss_pred hhhcccccC---eEEcCC-CCEEEEEe-CCeEEEEecCCC---cEEEEe--ecCcceeEEEEecCCCeEEEEeccCCeEE
Q 014755 4 TEAYKQTGP---SCFSPN-ARYIAVAV-DYRLVVRDAHSF---KVVQLF--SCLDKISYIEWALDSEYILCGLYKRLMIQ 73 (419)
Q Consensus 4 ~~~~~~~~~---~~~s~d-~~~la~~~-~~~i~i~~~~~~---~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~~~g~i~ 73 (419)
..+.+|.+. ++|+|- |..||+++ |..|+||+...+ .+...+ .|+..|.+++|+|.|++|++++.| .++.
T Consensus 8 ~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD-~t~~ 86 (312)
T KOG0645|consen 8 QKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFD-ATVV 86 (312)
T ss_pred EeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeecc-ceEE
Confidence 445677775 899998 89999998 788999998853 333333 389999999999999999999998 7999
Q ss_pred EEEccCC--cceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCe---EEE-eccCCCCeeeEEEccCCCEE
Q 014755 74 AWSLTQP--EWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTA---CVH-VQSPKHASKGVAFTQDGKFA 147 (419)
Q Consensus 74 iw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~---~~~-~~~~~~~~~~~~~~~~~~~l 147 (419)
||.-..+ +++..+.+|...|.+++|+++|.+||+++.|+ .|-+|.+..+. +.. +..|...|..+.|+|...+|
T Consensus 87 Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDK-SVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL 165 (312)
T KOG0645|consen 87 IWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDK-SVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLL 165 (312)
T ss_pred EeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCC-eEEEEEecCCCcEEEEeeeccccccccEEEEcCCccee
Confidence 9997765 56777999999999999999999999999999 99999998543 333 88999999999999999999
Q ss_pred EEEeecCCCCeEEEEecc---CCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCc
Q 014755 148 AICTRRDCKDYINLLSCH---TWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLG 224 (419)
Q Consensus 148 ~~~~~~~~~g~v~i~d~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 224 (419)
++++.| .+|++|.-. .+++++++.+|...|.+++|.|.|..|+. ++.|+++++|..-.. + ...+...
T Consensus 166 ~S~SYD---nTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s--~sdD~tv~Iw~~~~~----~-~~~~sr~ 235 (312)
T KOG0645|consen 166 FSCSYD---NTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVS--CSDDGTVSIWRLYTD----L-SGMHSRA 235 (312)
T ss_pred EEeccC---CeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEE--ecCCcceEeeeeccC----c-chhcccc
Confidence 999998 799999765 47889999999999999999999999998 778999999985211 1 1112237
Q ss_pred eeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccC
Q 014755 225 VKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATN 304 (419)
Q Consensus 225 v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (419)
++.+.|. ...|++++.|+.|++|.-...-.-..++ +...
T Consensus 236 ~Y~v~W~--~~~IaS~ggD~~i~lf~~s~~~d~p~~~-----------l~~~---------------------------- 274 (312)
T KOG0645|consen 236 LYDVPWD--NGVIASGGGDDAIRLFKESDSPDEPSWN-----------LLAK---------------------------- 274 (312)
T ss_pred eEeeeec--ccceEeccCCCEEEEEEecCCCCCchHH-----------HHHh----------------------------
Confidence 8889998 4489999999999999754211000110 0000
Q ss_pred CceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccC-CeEEEEecCCCCceEEEeecc
Q 014755 305 GHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSD-SQYICTRNDSMPTTLWIWDIC 365 (419)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~~~~~d~~~~i~iwd~~ 365 (419)
....|...|++++|.|. ..+|+++++| |.|++|.+.
T Consensus 275 -----------------------~~~aHe~dVNsV~w~p~~~~~L~s~~DD--G~v~~W~l~ 311 (312)
T KOG0645|consen 275 -----------------------KEGAHEVDVNSVQWNPKVSNRLASGGDD--GIVNFWELE 311 (312)
T ss_pred -----------------------hhcccccccceEEEcCCCCCceeecCCC--ceEEEEEec
Confidence 01247788999999995 6789999999 999999875
No 35
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=9.9e-37 Score=262.73 Aligned_cols=314 Identities=15% Similarity=0.194 Sum_probs=272.6
Q ss_pred eEEcCCCCEEEEEeCCeEEEEecCCCcEEEE-eecCcceeEEEEe-cCCCeEEEEeccCCeEEEEEccCCcceeeeecCC
Q 014755 13 SCFSPNARYIAVAVDYRLVVRDAHSFKVVQL-FSCLDKISYIEWA-LDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGL 90 (419)
Q Consensus 13 ~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~-~~~~~~v~~~~~s-~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~ 90 (419)
+....+++.|+...+.++.++|.++.++.+. .+..+.|.+|.|- |+.++||+++.. +.++++++.+..+. .+.+|.
T Consensus 288 ~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs-~~lr~y~~~~~~c~-ii~GH~ 365 (775)
T KOG0319|consen 288 LAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNS-PELRLYTLPTSYCQ-IIPGHT 365 (775)
T ss_pred eeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEeCC-CceEEEecCCCceE-EEeCch
Confidence 4455577788888899999999999988874 4577889999875 677899999865 79999998887765 788999
Q ss_pred ccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-----eccCCCCeeeEEEccCC-CEEEEEeecCCCCeEEEEec
Q 014755 91 AGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-----VQSPKHASKGVAFTQDG-KFAAICTRRDCKDYINLLSC 164 (419)
Q Consensus 91 ~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~g~v~i~d~ 164 (419)
..|.++....+|-+|++++.|. ++++|.++.+.... ..+|.+.+.+++++..+ ..|++++.| +++++|++
T Consensus 366 e~vlSL~~~~~g~llat~sKD~-svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D---~tlK~W~l 441 (775)
T KOG0319|consen 366 EAVLSLDVWSSGDLLATGSKDK-SVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQD---CTLKLWDL 441 (775)
T ss_pred hheeeeeecccCcEEEEecCCc-eEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCC---ceEEEecC
Confidence 9999999777888999999998 99999885543322 67899999999998777 678888887 89999999
Q ss_pred cCCeEEE---------EEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCC
Q 014755 165 HTWEIMG---------VFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCG 234 (419)
Q Consensus 165 ~~~~~~~---------~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~ 234 (419)
...+... ....|+..|++++++|+.+.+++ ++.|.+.++|++ +......+.+|.. .|.++.|+|..
T Consensus 442 ~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT--~SqDktaKiW~le~~~l~~vLsGH~R--Gvw~V~Fs~~d 517 (775)
T KOG0319|consen 442 PKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIAT--GSQDKTAKIWDLEQLRLLGVLSGHTR--GVWCVSFSKND 517 (775)
T ss_pred CCcccccccceehhhHHHHhhcccccceEecCCCceEEe--cccccceeeecccCceEEEEeeCCcc--ceEEEEecccc
Confidence 7622111 22458899999999999999999 889999999999 8888899998877 89999999999
Q ss_pred CeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEec
Q 014755 235 QFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVM 314 (419)
Q Consensus 235 ~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (419)
+.++++|.|++|+||.+.+..++++|+
T Consensus 518 q~laT~SgD~TvKIW~is~fSClkT~e----------------------------------------------------- 544 (775)
T KOG0319|consen 518 QLLATCSGDKTVKIWSISTFSCLKTFE----------------------------------------------------- 544 (775)
T ss_pred ceeEeccCCceEEEEEeccceeeeeec-----------------------------------------------------
Confidence 999999999999999999999999875
Q ss_pred cCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc-cCCCeeEEEeCCCCCeEEE
Q 014755 315 EIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV-QKDPIRAATWDPTCTRLVL 393 (419)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s 393 (419)
+|...|..+.|-.+|+.|++++.| |.|+||++.++++...+. |...|++++-+|.+.++++
T Consensus 545 ----------------GH~~aVlra~F~~~~~qliS~~ad--GliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~~~~t 606 (775)
T KOG0319|consen 545 ----------------GHTSAVLRASFIRNGKQLISAGAD--GLIKLWNIKTNECEMTLDAHNDRVWALSVSPLLDMFVT 606 (775)
T ss_pred ----------------CccceeEeeeeeeCCcEEEeccCC--CcEEEEeccchhhhhhhhhccceeEEEeecCccceeEe
Confidence 678888999999999999999999 999999999999998885 9999999999999999999
Q ss_pred EeCCCcEEEeecCC
Q 014755 394 CTGSSHLYMWTPSG 407 (419)
Q Consensus 394 ~~~dg~i~vw~~~~ 407 (419)
|+.||.|.+|.=.+
T Consensus 607 gg~Dg~i~~wkD~T 620 (775)
T KOG0319|consen 607 GGGDGRIIFWKDVT 620 (775)
T ss_pred cCCCeEEEEeecCc
Confidence 99999999996543
No 36
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=1.3e-36 Score=270.97 Aligned_cols=277 Identities=17% Similarity=0.283 Sum_probs=240.8
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCCCc--EEEE-eecCcceeEEEEecCCCeEEEEeccCCeEEEEEc-cCCcceeeee
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHSFK--VVQL-FSCLDKISYIEWALDSEYILCGLYKRLMIQAWSL-TQPEWTCKID 87 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~~~--~~~~-~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~-~~~~~~~~~~ 87 (419)
+.|||||+++++++ ++.+++|+..+++ ..+. .+|...|..++|+|+++++++++.| ++|+|||+ ..+..++.+.
T Consensus 165 ~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D-~tiriwd~~~~~~~~~~l~ 243 (456)
T KOG0266|consen 165 VDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDD-KTLRIWDLKDDGRNLKTLK 243 (456)
T ss_pred EEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCC-ceEEEeeccCCCeEEEEec
Confidence 78999999999996 8899999997777 4544 4699999999999999999999976 89999999 5558888999
Q ss_pred cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC
Q 014755 88 EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT 166 (419)
Q Consensus 88 ~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~ 166 (419)
+|...|++++|+|+++.+++++.|+ +|++||++++++.. +..|...+.+++|++++++|++++.| +.|++||+.+
T Consensus 244 gH~~~v~~~~f~p~g~~i~Sgs~D~-tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d---~~i~vwd~~~ 319 (456)
T KOG0266|consen 244 GHSTYVTSVAFSPDGNLLVSGSDDG-TVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYD---GTIRVWDLET 319 (456)
T ss_pred CCCCceEEEEecCCCCEEEEecCCC-cEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCC---ccEEEEECCC
Confidence 9999999999999999999999988 99999999999988 99999999999999999999999876 8999999999
Q ss_pred Ce--EEEEEeccccc--eeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCC-CceeEEEEccCCCeEEEE
Q 014755 167 WE--IMGVFAVDTLD--LADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESG-LGVKSISWSPCGQFLAVG 240 (419)
Q Consensus 167 ~~--~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~ 240 (419)
++ +...+..+... ++++.|+|++.++++ +..|+.+++||+ .+.....+..+... ..+.+...++.++++++|
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~--~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg 397 (456)
T KOG0266|consen 320 GSKLCLKLLSGAENSAPVTSVQFSPNGKYLLS--ASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSG 397 (456)
T ss_pred CceeeeecccCCCCCCceeEEEECCCCcEEEE--ecCCCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEEE
Confidence 98 45666666554 999999999999999 777899999999 68888888887664 245556668899999999
Q ss_pred EecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCC
Q 014755 241 SYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISL 320 (419)
Q Consensus 241 ~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (419)
+.|+.|++||+.++..+..+.
T Consensus 398 ~~d~~v~~~~~~s~~~~~~l~----------------------------------------------------------- 418 (456)
T KOG0266|consen 398 SEDGSVYVWDSSSGGILQRLE----------------------------------------------------------- 418 (456)
T ss_pred eCCceEEEEeCCccchhhhhc-----------------------------------------------------------
Confidence 999999999999876666554
Q ss_pred CCCCCCCCCCCC-CcceEEEEEccCCeEEEEecCCCCceEEEeecc
Q 014755 321 PFQKPPTDKPNP-KQGIGLMSWSSDSQYICTRNDSMPTTLWIWDIC 365 (419)
Q Consensus 321 ~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~ 365 (419)
+| ...+..++++|...++++++.+.++.+++|..+
T Consensus 419 ----------~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 419 ----------GHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred ----------CCCCCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence 35 556888999999999999984333999999754
No 37
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=5.3e-36 Score=258.76 Aligned_cols=363 Identities=14% Similarity=0.120 Sum_probs=261.1
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEe-ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCC
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLF-SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGL 90 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~ 90 (419)
+.-+||.-+||+|. ||.|+||+..+....-.+ +|...|+++.|...|..|++|+.| +.|.+||+-...-..++.+|.
T Consensus 71 l~~~~d~l~lAVGYaDGsVqif~~~s~~~~~tfngHK~AVt~l~fd~~G~rlaSGskD-t~IIvwDlV~E~Gl~rL~GHk 149 (888)
T KOG0306|consen 71 LRSSDDILLLAVGYADGSVQIFSLESEEILITFNGHKAAVTTLKFDKIGTRLASGSKD-TDIIVWDLVGEEGLFRLRGHK 149 (888)
T ss_pred eeccCCcceEEEEecCceEEeeccCCCceeeeecccccceEEEEEcccCceEeecCCC-ccEEEEEeccceeeEEeecch
Confidence 55568888899997 999999999988766555 599999999999999999999987 899999998777778899999
Q ss_pred ccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC---
Q 014755 91 AGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT--- 166 (419)
Q Consensus 91 ~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~--- 166 (419)
..|+.+-|..+.+.+++++.|. .|++||+++..+.. ...|...+.++++.+ +.+++++.+ +.+++|++..
T Consensus 150 d~iT~~~F~~~~~~lvS~sKDs-~iK~WdL~tqhCf~Thvd~r~Eiw~l~~~~--~~lvt~~~d---se~~v~~L~~~~D 223 (888)
T KOG0306|consen 150 DSITQALFLNGDSFLVSVSKDS-MIKFWDLETQHCFETHVDHRGEIWALVLDE--KLLVTAGTD---SELKVWELAFEDD 223 (888)
T ss_pred HHHhHHhccCCCeEEEEeccCc-eEEEEecccceeeeEEecccceEEEEEEec--ceEEEEecC---CceEEEEeecccc
Confidence 9999999999899999999998 99999999988777 666777777777766 455555444 4555555510
Q ss_pred -------------C------e-----------------------------------------------------------
Q 014755 167 -------------W------E----------------------------------------------------------- 168 (419)
Q Consensus 167 -------------~------~----------------------------------------------------------- 168 (419)
| +
T Consensus 224 ~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v 303 (888)
T KOG0306|consen 224 EKETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDV 303 (888)
T ss_pred cccccccceeeccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccch
Confidence 0 0
Q ss_pred -------------------------------E------------------------------EEEEeccccceeeeeECC
Q 014755 169 -------------------------------I------------------------------MGVFAVDTLDLADIEWSP 187 (419)
Q Consensus 169 -------------------------------~------------------------------~~~~~~~~~~v~~~~~~~ 187 (419)
. ...+.+|...|++++++.
T Consensus 304 ~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~ 383 (888)
T KOG0306|consen 304 EKSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSS 383 (888)
T ss_pred hhhHHHHHHHHHheechhheeEEEEEecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeec
Confidence 0 001122444556666665
Q ss_pred CCCeEEEEcCCCCceEEEEcC-CCceEEE----------------------------------------EeecCCCCcee
Q 014755 188 DDSAIVIWDSPLEYKVLIYSP-DGRCLLK----------------------------------------YQAYESGLGVK 226 (419)
Q Consensus 188 ~~~~l~~~~~~~~~~i~~~d~-~~~~~~~----------------------------------------~~~~~~~~~v~ 226 (419)
+...++. ...+.+++|+. +.+++++ ++.|. +.+.
T Consensus 384 d~~~~~S---ga~~SikiWn~~t~kciRTi~~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHd--gaIW 458 (888)
T KOG0306|consen 384 DSILLAS---GAGESIKIWNRDTLKCIRTITCGYILASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHD--GAIW 458 (888)
T ss_pred Cceeeee---cCCCcEEEEEccCcceeEEeccccEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhccc--ccee
Confidence 5555554 23455555555 5444443 33333 4899
Q ss_pred EEEEccCCCeEEEEEecCcEEEEEcCCc-----eeee--eecccccccC--CCccceeccCCCcccccceeeeccCcccc
Q 014755 227 SISWSPCGQFLAVGSYDQTLRVLNHLTW-----KTFA--EFMHLSTVRG--PCFPAVFKEVDEPLQLDMSELCLNDDFIQ 297 (419)
Q Consensus 227 ~~~~s~~~~~l~~~~~d~~i~v~d~~~~-----~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (419)
+++.+||++.+++|+.|.+|++||..-- ...+ .+.|...+.- ..-++.++ |+| ..
T Consensus 459 si~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~S----pdg------------k~ 522 (888)
T KOG0306|consen 459 SISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVS----PDG------------KL 522 (888)
T ss_pred eeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEc----CCC------------cE
Confidence 9999999999999999999999996421 1111 1112222211 11223333 222 11
Q ss_pred ccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec-ccC
Q 014755 298 GNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL-VQK 376 (419)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~-~~~ 376 (419)
.+.. .-.+...+|-+. ..+-...+-+|.-+|.++.+|||++.+++|+.| .+|+||-++-|.+...+ .|.
T Consensus 523 LaVs-LLdnTVkVyflD-------tlKFflsLYGHkLPV~smDIS~DSklivTgSAD--KnVKiWGLdFGDCHKS~fAHd 592 (888)
T KOG0306|consen 523 LAVS-LLDNTVKVYFLD-------TLKFFLSLYGHKLPVLSMDISPDSKLIVTGSAD--KNVKIWGLDFGDCHKSFFAHD 592 (888)
T ss_pred EEEE-eccCeEEEEEec-------ceeeeeeecccccceeEEeccCCcCeEEeccCC--CceEEeccccchhhhhhhccc
Confidence 1111 112333444443 334445567899999999999999999999999 99999999999988655 799
Q ss_pred CCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEEec
Q 014755 377 DPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCVSN 413 (419)
Q Consensus 377 ~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~ 413 (419)
..|.++.|-|+..++.++|.|+.|+-||-+.-+.++.
T Consensus 593 DSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~ 629 (888)
T KOG0306|consen 593 DSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQK 629 (888)
T ss_pred CceeEEEEcccceeEEEecCcceEEeechhhhhhhee
Confidence 9999999999999999999999999999886655543
No 38
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=100.00 E-value=2.9e-38 Score=259.44 Aligned_cols=284 Identities=13% Similarity=0.204 Sum_probs=240.2
Q ss_pred eecCcceeEEEEec-CCCeEEEEeccCCeEEEEEccC-CcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcC
Q 014755 44 FSCLDKISYIEWAL-DSEYILCGLYKRLMIQAWSLTQ-PEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLL 121 (419)
Q Consensus 44 ~~~~~~v~~~~~s~-~~~~l~~~~~~~g~i~iw~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~ 121 (419)
.+|...|+++.|.| .+.+|++++.| +.|+||++.. +++++++.+|..+|.+++|+++|..+++++-|. .+++||++
T Consensus 211 ~gH~kgvsai~~fp~~~hLlLS~gmD-~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~-~lKlwDtE 288 (503)
T KOG0282|consen 211 SGHTKGVSAIQWFPKKGHLLLSGGMD-GLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDR-FLKLWDTE 288 (503)
T ss_pred cCCccccchhhhccceeeEEEecCCC-ceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecce-eeeeeccc
Confidence 35999999999999 88888999877 8999999976 789999999999999999999999999999998 99999999
Q ss_pred CCeEEEeccCCCCeeeEEEccCC-CEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCC
Q 014755 122 NTACVHVQSPKHASKGVAFTQDG-KFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLE 200 (419)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~ 200 (419)
+|++.........+.++.|+|++ +.+++|+.+ +.|+.||+++++.++.+..|-+.|..+.|-++|+++++ .+.+
T Consensus 289 TG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd---~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFis--sSDd 363 (503)
T KOG0282|consen 289 TGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGSD---KKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFIS--SSDD 363 (503)
T ss_pred cceEEEEEecCCCceeeecCCCCCcEEEEecCC---CcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEee--eccC
Confidence 99999855566677999999999 667777766 89999999999999999999999999999999999998 6778
Q ss_pred ceEEEEcC-CCceEEEEe-ecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccC
Q 014755 201 YKVLIYSP-DGRCLLKYQ-AYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEV 278 (419)
Q Consensus 201 ~~i~~~d~-~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (419)
+.+++|+. .+-.++... ...+ ...++..+|++++++.-+.|+.|.+|.+...-.+...+
T Consensus 364 ks~riWe~~~~v~ik~i~~~~~h--smP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK----------------- 424 (503)
T KOG0282|consen 364 KSVRIWENRIPVPIKNIADPEMH--TMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKK----------------- 424 (503)
T ss_pred ccEEEEEcCCCccchhhcchhhc--cCcceecCCCCCeehhhccCceEEEEecccccccCHhh-----------------
Confidence 99999998 443333222 2223 67889999999999999999999999854321111000
Q ss_pred CCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCC--CcceEEEEEccCCeEEEEecCCCC
Q 014755 279 DEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNP--KQGIGLMSWSSDSQYICTRNDSMP 356 (419)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~s~~g~~l~~~~~d~~ 356 (419)
.+.+| .+.-..+.|||||++|++|+.|
T Consensus 425 -------------------------------------------------~feGh~vaGys~~v~fSpDG~~l~SGdsd-- 453 (503)
T KOG0282|consen 425 -------------------------------------------------RFEGHSVAGYSCQVDFSPDGRTLCSGDSD-- 453 (503)
T ss_pred -------------------------------------------------hhcceeccCceeeEEEcCCCCeEEeecCC--
Confidence 01122 2234678999999999999999
Q ss_pred ceEEEeeccCCCceeecc-cCCCeeEEEeCCCCC-eEEEEeCCCcEEEee
Q 014755 357 TTLWIWDICRQEPAAILV-QKDPIRAATWDPTCT-RLVLCTGSSHLYMWT 404 (419)
Q Consensus 357 ~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~-~l~s~~~dg~i~vw~ 404 (419)
|.+.+||.++-+++..+. |.+++..+.|+|... .+|+++.||.|++|+
T Consensus 454 G~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 454 GKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred ccEEEeechhhhhhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 999999999999887775 999999999999876 899999999999996
No 39
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=100.00 E-value=2.4e-35 Score=251.97 Aligned_cols=277 Identities=23% Similarity=0.416 Sum_probs=238.8
Q ss_pred cccccC---eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEe-ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCc
Q 014755 7 YKQTGP---SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLF-SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPE 81 (419)
Q Consensus 7 ~~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~ 81 (419)
.+|... ++|+|++++|++++ ++.+.+|++.+++..... .|...+..+.|+|+++++++++.+ |.|++|++.+++
T Consensus 6 ~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~-~~i~i~~~~~~~ 84 (289)
T cd00200 6 KGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSD-KTIRLWDLETGE 84 (289)
T ss_pred cccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCC-CeEEEEEcCccc
Confidence 355554 88999999999998 899999999988765544 478889999999999999999876 899999999988
Q ss_pred ceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEE
Q 014755 82 WTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYIN 160 (419)
Q Consensus 82 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~ 160 (419)
....+..|...+.++.|+++++.+++++.++ .+.+||+++++... +..+...+.+++|+|++.++++++.+ +.|+
T Consensus 85 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~---~~i~ 160 (289)
T cd00200 85 CVRTLTGHTSYVSSVAFSPDGRILSSSSRDK-TIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQD---GTIK 160 (289)
T ss_pred ceEEEeccCCcEEEEEEcCCCCEEEEecCCC-eEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCC---CcEE
Confidence 8888888888999999999988888877666 99999999877766 66688889999999998888888755 7999
Q ss_pred EEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEE
Q 014755 161 LLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAV 239 (419)
Q Consensus 161 i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 239 (419)
+||+++++.+..+..+...+.++.|+|+++.+++ +..++.+++||. .++.+..+..+.. .+.++.|+|++.++++
T Consensus 161 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~--~~~~~~i~i~d~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~~ 236 (289)
T cd00200 161 LWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLS--SSSDGTIKLWDLSTGKCLGTLRGHEN--GVNSVAFSPDGYLLAS 236 (289)
T ss_pred EEEccccccceeEecCccccceEEECCCcCEEEE--ecCCCcEEEEECCCCceecchhhcCC--ceEEEEEcCCCcEEEE
Confidence 9999999988888888889999999999988888 455999999999 6777777755554 7999999999888888
Q ss_pred EEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCC
Q 014755 240 GSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPIS 319 (419)
Q Consensus 240 ~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (419)
++.++.|++||+.+++.+..+.
T Consensus 237 ~~~~~~i~i~~~~~~~~~~~~~---------------------------------------------------------- 258 (289)
T cd00200 237 GSEDGTIRVWDLRTGECVQTLS---------------------------------------------------------- 258 (289)
T ss_pred EcCCCcEEEEEcCCceeEEEcc----------------------------------------------------------
Confidence 8889999999998877665543
Q ss_pred CCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEee
Q 014755 320 LPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWD 363 (419)
Q Consensus 320 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd 363 (419)
.|...|.+++|+|++++|++++.| +.|++|+
T Consensus 259 -----------~~~~~i~~~~~~~~~~~l~~~~~d--~~i~iw~ 289 (289)
T cd00200 259 -----------GHTNSVTSLAWSPDGKRLASGSAD--GTIRIWD 289 (289)
T ss_pred -----------ccCCcEEEEEECCCCCEEEEecCC--CeEEecC
Confidence 255668999999999999999998 9999996
No 40
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=2.5e-37 Score=249.07 Aligned_cols=282 Identities=18% Similarity=0.319 Sum_probs=230.0
Q ss_pred hcccccC---eEEcCCCCEEEEEe-CCeEEEEecCCCcE---EE-EeecCcceeEEEEecCCCeEEEEeccCCeEEEEEc
Q 014755 6 AYKQTGP---SCFSPNARYIAVAV-DYRLVVRDAHSFKV---VQ-LFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSL 77 (419)
Q Consensus 6 ~~~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~~~---~~-~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~ 77 (419)
...|... +.||++|+|||+++ |.+..||++..... .+ ..+|..+|..+.||||.++|++++.++ .+.+||+
T Consensus 220 l~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e-~~~lwDv 298 (519)
T KOG0293|consen 220 LQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDE-VLSLWDV 298 (519)
T ss_pred HhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchH-heeeccC
Confidence 3456555 89999999999998 77888887654332 33 446999999999999999999999885 8999999
Q ss_pred cCCcceeeeecC-CccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccC-CCCeeeEEEccCCCEEEEEeecCC
Q 014755 78 TQPEWTCKIDEG-LAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSP-KHASKGVAFTQDGKFAAICTRRDC 155 (419)
Q Consensus 78 ~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~ 155 (419)
.+|.....+... ...+.+++|.|||..+++|+.|+ .+..||+.........+. ...+.+++.++||++++....|
T Consensus 299 ~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr-~i~~wdlDgn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d-- 375 (519)
T KOG0293|consen 299 DTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDR-TIIMWDLDGNILGNWEGVRDPKVHDLAITYDGKYVLLVTVD-- 375 (519)
T ss_pred CcchhhhhcccCcCCCcceeEEccCCceeEecCCCC-cEEEecCCcchhhcccccccceeEEEEEcCCCcEEEEEecc--
Confidence 999887666433 46799999999999999999998 999999987654443322 3457999999999999998887
Q ss_pred CCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEcc-C
Q 014755 156 KDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSP-C 233 (419)
Q Consensus 156 ~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~-~ 233 (419)
..|++++..+........ ...++++...|.+++++++ .-.+..+.+||+ +...++.+.+|.....+-.-+|-- +
T Consensus 376 -~~i~l~~~e~~~dr~lis-e~~~its~~iS~d~k~~Lv--nL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~ 451 (519)
T KOG0293|consen 376 -KKIRLYNREARVDRGLIS-EEQPITSFSISKDGKLALV--NLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGN 451 (519)
T ss_pred -cceeeechhhhhhhcccc-ccCceeEEEEcCCCcEEEE--EcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCC
Confidence 799999988755544333 3578999999999999888 566899999999 777888888877655666666754 4
Q ss_pred CCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEe
Q 014755 234 GQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEV 313 (419)
Q Consensus 234 ~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (419)
..++++|++|+.|+||+..+++++..+.
T Consensus 452 ~~fiaSGSED~kvyIWhr~sgkll~~Ls---------------------------------------------------- 479 (519)
T KOG0293|consen 452 DKFIASGSEDSKVYIWHRISGKLLAVLS---------------------------------------------------- 479 (519)
T ss_pred cceEEecCCCceEEEEEccCCceeEeec----------------------------------------------------
Confidence 4799999999999999999999888764
Q ss_pred ccCCCCCCCCCCCCCCCCCCcceEEEEEccCC-eEEEEecCCCCceEEEeeccC
Q 014755 314 MEIPISLPFQKPPTDKPNPKQGIGLMSWSSDS-QYICTRNDSMPTTLWIWDICR 366 (419)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~d~~~~i~iwd~~~ 366 (419)
+|...|++++|+|.. ..+|++++| |+|+||-...
T Consensus 480 -----------------GHs~~vNcVswNP~~p~m~ASasDD--gtIRIWg~~~ 514 (519)
T KOG0293|consen 480 -----------------GHSKTVNCVSWNPADPEMFASASDD--GTIRIWGPSD 514 (519)
T ss_pred -----------------CCcceeeEEecCCCCHHHhhccCCC--CeEEEecCCc
Confidence 688889999999955 568889998 9999997653
No 41
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=4.3e-35 Score=280.76 Aligned_cols=301 Identities=11% Similarity=0.154 Sum_probs=235.7
Q ss_pred CeEEEEecCCCcEEEE------eecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC----c----ceeeeecCCccE
Q 014755 28 YRLVVRDAHSFKVVQL------FSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP----E----WTCKIDEGLAGI 93 (419)
Q Consensus 28 ~~i~i~~~~~~~~~~~------~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~----~----~~~~~~~~~~~v 93 (419)
|-.++|+....+.... ..|.+.|.+++|+|+|+++|+++.| +.|+||++... . ....+ .+...+
T Consensus 458 gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D-~~I~iwd~~~~~~~~~~~~~~~~~~-~~~~~v 535 (793)
T PLN00181 458 GLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVN-KKIKIFECESIIKDGRDIHYPVVEL-ASRSKL 535 (793)
T ss_pred hhhhhhcccceEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCC-CEEEEEECCcccccccccccceEEe-cccCce
Confidence 4466777665554332 2378899999999999999999976 89999997542 1 11222 345678
Q ss_pred eEEEECC-CCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEcc-CCCEEEEEeecCCCCeEEEEeccCCeEE
Q 014755 94 AYARWSP-DSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQ-DGKFAAICTRRDCKDYINLLSCHTWEIM 170 (419)
Q Consensus 94 ~~~~~~~-~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~g~v~i~d~~~~~~~ 170 (419)
.+++|++ ++.+|++++.|+ .|++||+.+++.+. +..|...|.+++|+| ++.+|++++.| +.|++||+++++.+
T Consensus 536 ~~l~~~~~~~~~las~~~Dg-~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~D---g~v~iWd~~~~~~~ 611 (793)
T PLN00181 536 SGICWNSYIKSQVASSNFEG-VVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDD---GSVKLWSINQGVSI 611 (793)
T ss_pred eeEEeccCCCCEEEEEeCCC-eEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCC---CEEEEEECCCCcEE
Confidence 9999987 477888888887 99999999988776 788999999999997 77899999987 89999999999888
Q ss_pred EEEeccccceeeeeEC-CCCCeEEEEcCCCCceEEEEcC-CCc-eEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEE
Q 014755 171 GVFAVDTLDLADIEWS-PDDSAIVIWDSPLEYKVLIYSP-DGR-CLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLR 247 (419)
Q Consensus 171 ~~~~~~~~~v~~~~~~-~~~~~l~~~~~~~~~~i~~~d~-~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~ 247 (419)
..+..+ ..+.++.|+ +++..+++ ++.|+.|++||+ +++ .+..+..|.. .|.++.|. ++.+|++++.|++|+
T Consensus 612 ~~~~~~-~~v~~v~~~~~~g~~lat--gs~dg~I~iwD~~~~~~~~~~~~~h~~--~V~~v~f~-~~~~lvs~s~D~~ik 685 (793)
T PLN00181 612 GTIKTK-ANICCVQFPSESGRSLAF--GSADHKVYYYDLRNPKLPLCTMIGHSK--TVSYVRFV-DSSTLVSSSTDNTLK 685 (793)
T ss_pred EEEecC-CCeEEEEEeCCCCCEEEE--EeCCCeEEEEECCCCCccceEecCCCC--CEEEEEEe-CCCEEEEEECCCEEE
Confidence 887754 678899995 56888888 677999999999 443 4555665554 89999997 678999999999999
Q ss_pred EEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCC
Q 014755 248 VLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPT 327 (419)
Q Consensus 248 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (419)
+||+..+..... .++..
T Consensus 686 iWd~~~~~~~~~---------------------------------------------------------------~~~l~ 702 (793)
T PLN00181 686 LWDLSMSISGIN---------------------------------------------------------------ETPLH 702 (793)
T ss_pred EEeCCCCccccC---------------------------------------------------------------CcceE
Confidence 999864310000 00111
Q ss_pred CCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceee--------------cccCCCeeEEEeCCCCCeEEE
Q 014755 328 DKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAI--------------LVQKDPIRAATWDPTCTRLVL 393 (419)
Q Consensus 328 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~--------------~~~~~~v~~~~~s~~~~~l~s 393 (419)
.+.+|...+..++|+|++.+||+|+.| +.|++|+......... ..|...|.+++|+|++..|++
T Consensus 703 ~~~gh~~~i~~v~~s~~~~~lasgs~D--~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva 780 (793)
T PLN00181 703 SFMGHTNVKNFVGLSVSDGYIATGSET--NEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVA 780 (793)
T ss_pred EEcCCCCCeeEEEEcCCCCEEEEEeCC--CEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEE
Confidence 123577788999999999999999999 9999999875543211 124567999999999999999
Q ss_pred EeCCCcEEEeec
Q 014755 394 CTGSSHLYMWTP 405 (419)
Q Consensus 394 ~~~dg~i~vw~~ 405 (419)
++.||.|+||++
T Consensus 781 ~~~dG~I~i~~~ 792 (793)
T PLN00181 781 ANSTGNIKILEM 792 (793)
T ss_pred ecCCCcEEEEec
Confidence 999999999996
No 42
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=100.00 E-value=4.1e-36 Score=237.87 Aligned_cols=282 Identities=11% Similarity=0.169 Sum_probs=249.8
Q ss_pred cccccC---eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCc
Q 014755 7 YKQTGP---SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPE 81 (419)
Q Consensus 7 ~~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~ 81 (419)
.+|.+- +++.|.+.++++|+ |++++|||+.++++...+. |...|..+++|+-..||++++.| +.|+.||++..+
T Consensus 148 ~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~ged-k~VKCwDLe~nk 226 (460)
T KOG0285|consen 148 SGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGED-KQVKCWDLEYNK 226 (460)
T ss_pred hhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCC-CeeEEEechhhh
Confidence 456554 89999999999998 8999999999999887665 99999999999999999999976 799999999999
Q ss_pred ceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEE
Q 014755 82 WTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYIN 160 (419)
Q Consensus 82 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~ 160 (419)
.++.+.+|-..|.+++..|.-..|++++.|. .+++||+++...+. +.+|..+|..+.+.|-...+++++.| ++|+
T Consensus 227 vIR~YhGHlS~V~~L~lhPTldvl~t~grDs-t~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D---~tvr 302 (460)
T KOG0285|consen 227 VIRHYHGHLSGVYCLDLHPTLDVLVTGGRDS-TIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHD---STVR 302 (460)
T ss_pred hHHHhccccceeEEEeccccceeEEecCCcc-eEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCC---ceEE
Confidence 9999999999999999999999999999998 99999999988887 89999999999999999999999998 8999
Q ss_pred EEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEE
Q 014755 161 LLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAV 239 (419)
Q Consensus 161 i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 239 (419)
+||++.++....+..|...+++++.+|....++. .....|+-|++ .|..+..+.+|.. .+++++...|| ++++
T Consensus 303 lWDl~agkt~~tlt~hkksvral~lhP~e~~fAS---as~dnik~w~~p~g~f~~nlsgh~~--iintl~~nsD~-v~~~ 376 (460)
T KOG0285|consen 303 LWDLRAGKTMITLTHHKKSVRALCLHPKENLFAS---ASPDNIKQWKLPEGEFLQNLSGHNA--IINTLSVNSDG-VLVS 376 (460)
T ss_pred EeeeccCceeEeeecccceeeEEecCCchhhhhc---cCCccceeccCCccchhhccccccc--eeeeeeeccCc-eEEE
Confidence 9999999999999999999999999999888876 33568999999 8888888887766 79999998887 7889
Q ss_pred EEecCcEEEEEcCCceeeeeec---ccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccC
Q 014755 240 GSYDQTLRVLNHLTWKTFAEFM---HLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEI 316 (419)
Q Consensus 240 ~~~d~~i~v~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (419)
|+.+|.+.+||.++|-..+..+ .+..+
T Consensus 377 G~dng~~~fwdwksg~nyQ~~~t~vqpGSl-------------------------------------------------- 406 (460)
T KOG0285|consen 377 GGDNGSIMFWDWKSGHNYQRGQTIVQPGSL-------------------------------------------------- 406 (460)
T ss_pred cCCceEEEEEecCcCcccccccccccCCcc--------------------------------------------------
Confidence 9999999999999987665543 11111
Q ss_pred CCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeecc
Q 014755 317 PISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDIC 365 (419)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~ 365 (419)
....+|.+.+|...|..|+++..| .+|++|.-+
T Consensus 407 --------------~sEagI~as~fDktg~rlit~ead--KtIk~~keD 439 (460)
T KOG0285|consen 407 --------------ESEAGIFASCFDKTGSRLITGEAD--KTIKMYKED 439 (460)
T ss_pred --------------ccccceeEEeecccCceEEeccCC--cceEEEecc
Confidence 134568999999999999999999 999999744
No 43
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-35 Score=225.97 Aligned_cols=291 Identities=12% Similarity=0.150 Sum_probs=243.5
Q ss_pred EEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEE
Q 014755 40 VVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWS 119 (419)
Q Consensus 40 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd 119 (419)
++.+.+|+.+++.+.++.+|.+|++++.| .+..+|-..+|+.+.++.+|.+.|+++....+.+++++++.|. ++++||
T Consensus 3 pi~l~GHERplTqiKyN~eGDLlFscaKD-~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~-t~kLWD 80 (327)
T KOG0643|consen 3 PILLQGHERPLTQIKYNREGDLLFSCAKD-STPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQ-TAKLWD 80 (327)
T ss_pred ccccccCccccceEEecCCCcEEEEecCC-CCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccc-eeEEEE
Confidence 45567899999999999999999999987 6999999999999999999999999999999999999999998 999999
Q ss_pred cCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecC--CCCeEEEEecc-------CCeEEEEEeccccceeeeeECCCCC
Q 014755 120 LLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRD--CKDYINLLSCH-------TWEIMGVFAVDTLDLADIEWSPDDS 190 (419)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~g~v~i~d~~-------~~~~~~~~~~~~~~v~~~~~~~~~~ 190 (419)
+++|+.+.....+.+|..+.|+++|++++....+. ..+.|.++|++ ..++...+..++..++.+-|.|-++
T Consensus 81 v~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~ 160 (327)
T KOG0643|consen 81 VETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGE 160 (327)
T ss_pred cCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCC
Confidence 99999999777888999999999999988877542 22479999998 3556777888889999999999999
Q ss_pred eEEEEcCCCCceEEEEcC-CCc-eEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccC
Q 014755 191 AIVIWDSPLEYKVLIYSP-DGR-CLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRG 268 (419)
Q Consensus 191 ~l~~~~~~~~~~i~~~d~-~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~ 268 (419)
+|+. +..+|.|..||. +|. .+.....|.+ .|+.+.++||..++++++.|.+-++||..+.+.++++....
T Consensus 161 ~ii~--Ghe~G~is~~da~~g~~~v~s~~~h~~--~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~te~---- 232 (327)
T KOG0643|consen 161 TIIA--GHEDGSISIYDARTGKELVDSDEEHSS--KINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTTER---- 232 (327)
T ss_pred EEEE--ecCCCcEEEEEcccCceeeechhhhcc--ccccccccCCcceEEecccCccceeeeccceeeEEEeeecc----
Confidence 9999 888999999999 664 4444455555 89999999999999999999999999999999988876332
Q ss_pred CCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEE
Q 014755 269 PCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYI 348 (419)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l 348 (419)
+|++.+++|....+
T Consensus 233 ------------------------------------------------------------------PvN~aaisP~~d~V 246 (327)
T KOG0643|consen 233 ------------------------------------------------------------------PVNTAAISPLLDHV 246 (327)
T ss_pred ------------------------------------------------------------------cccceecccccceE
Confidence 36788999987777
Q ss_pred EEecCCCCceEEEeeccCCC-------------ceeecccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 349 CTRNDSMPTTLWIWDICRQE-------------PAAILVQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 349 ~~~~~d~~~~i~iwd~~~~~-------------~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
+.|+......|.-=+.+.|+ +-...+|-++|++++|+|+|+..+||++||.|++.-.+
T Consensus 247 ilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~Fd 317 (327)
T KOG0643|consen 247 ILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHFD 317 (327)
T ss_pred EecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEEEec
Confidence 77654311222222222232 22344799999999999999999999999999998765
No 44
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=100.00 E-value=3.4e-37 Score=232.43 Aligned_cols=287 Identities=11% Similarity=0.201 Sum_probs=252.5
Q ss_pred EEEEeecCcceeEEEEec---CCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEE
Q 014755 40 VVQLFSCLDKISYIEWAL---DSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLT 116 (419)
Q Consensus 40 ~~~~~~~~~~v~~~~~s~---~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~ 116 (419)
++...+|..+|..++||| +|-+|++++.| |.-.+-+=++|.++.++.+|.+.|++.....+...-++++.|- +-+
T Consensus 7 pl~c~ghtrpvvdl~~s~itp~g~flisa~kd-~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadf-tak 84 (334)
T KOG0278|consen 7 PLTCHGHTRPVVDLAFSPITPDGYFLISASKD-GKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADF-TAK 84 (334)
T ss_pred ceEEcCCCcceeEEeccCCCCCceEEEEeccC-CCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccc-hhh
Confidence 444567999999999987 88889999977 8888888899999999999999999999998888888888887 899
Q ss_pred EEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCe-EEEEEeccccceeeeeECCCCCeEEEE
Q 014755 117 VWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWE-IMGVFAVDTLDLADIEWSPDDSAIVIW 195 (419)
Q Consensus 117 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~ 195 (419)
+||.-+|..+....|++-|..++|+.|.++|++|+.+ ..+++||++..+ +...+.+|.+.|..+.|....+.++.
T Consensus 85 vw~a~tgdelhsf~hkhivk~~af~~ds~~lltgg~e---kllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLS- 160 (334)
T KOG0278|consen 85 VWDAVTGDELHSFEHKHIVKAVAFSQDSNYLLTGGQE---KLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILS- 160 (334)
T ss_pred hhhhhhhhhhhhhhhhheeeeEEecccchhhhccchH---HHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEe-
Confidence 9999999988877899999999999999999999986 789999998743 56678899999999999999988887
Q ss_pred cCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccce
Q 014755 196 DSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAV 274 (419)
Q Consensus 196 ~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 274 (419)
...+++|++||. ++..++++.... +|+++.++++|++|.++ ..+.|.+||..+...++.++.+..
T Consensus 161 -Sadd~tVRLWD~rTgt~v~sL~~~s---~VtSlEvs~dG~ilTia-~gssV~Fwdaksf~~lKs~k~P~n--------- 226 (334)
T KOG0278|consen 161 -SADDKTVRLWDHRTGTEVQSLEFNS---PVTSLEVSQDGRILTIA-YGSSVKFWDAKSFGLLKSYKMPCN--------- 226 (334)
T ss_pred -eccCCceEEEEeccCcEEEEEecCC---CCcceeeccCCCEEEEe-cCceeEEeccccccceeeccCccc---------
Confidence 577899999999 999999988665 59999999999876554 456899999999888887764332
Q ss_pred eccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCC
Q 014755 275 FKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDS 354 (419)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d 354 (419)
|.+..++|+..++++|++|
T Consensus 227 -------------------------------------------------------------V~SASL~P~k~~fVaGged 245 (334)
T KOG0278|consen 227 -------------------------------------------------------------VESASLHPKKEFFVAGGED 245 (334)
T ss_pred -------------------------------------------------------------cccccccCCCceEEecCcc
Confidence 5778899999999999999
Q ss_pred CCceEEEeeccCCCceeec--ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCe
Q 014755 355 MPTTLWIWDICRQEPAAIL--VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAY 409 (419)
Q Consensus 355 ~~~~i~iwd~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~ 409 (419)
..++.||..+++.+..+ +|.++|.|+.|+|||...++||.||+|++|.+..++
T Consensus 246 --~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~ 300 (334)
T KOG0278|consen 246 --FKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGK 300 (334)
T ss_pred --eEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCC
Confidence 99999999999988764 699999999999999999999999999999987443
No 45
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=100.00 E-value=2.7e-35 Score=223.53 Aligned_cols=283 Identities=16% Similarity=0.299 Sum_probs=239.5
Q ss_pred EeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceee--eecCCccEeEEEECC-CCCEEEEEecCCCeEEEEE
Q 014755 43 LFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCK--IDEGLAGIAYARWSP-DSRHILTTSDFQLRLTVWS 119 (419)
Q Consensus 43 ~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~--~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~i~iwd 119 (419)
+.+|...+.+++|+.+|..|++++.| +++.+|+++..+.... ..+|.+.|..++|.| ....+++++.++ .|++||
T Consensus 16 ~~~~~~~v~Sv~wn~~g~~lasgs~d-ktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk-~ir~wd 93 (313)
T KOG1407|consen 16 LQGHVQKVHSVAWNCDGTKLASGSFD-KTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDK-TIRIWD 93 (313)
T ss_pred hhhhhhcceEEEEcccCceeeecccC-CceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCc-eEEEEE
Confidence 34588899999999999999999988 7999999987755443 457888899999988 456778888888 999999
Q ss_pred cCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCC
Q 014755 120 LLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPL 199 (419)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~ 199 (419)
++.+++.........-.-+.|+|+|.+++++..| ..|.+.|.++.+.....+. ...+..++|+-++..++. ...
T Consensus 94 ~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kd---D~it~id~r~~~~~~~~~~-~~e~ne~~w~~~nd~Ffl--t~G 167 (313)
T KOG1407|consen 94 IRSGKCTARIETKGENINITWSPDGEYIAVGNKD---DRITFIDARTYKIVNEEQF-KFEVNEISWNNSNDLFFL--TNG 167 (313)
T ss_pred eccCcEEEEeeccCcceEEEEcCCCCEEEEecCc---ccEEEEEecccceeehhcc-cceeeeeeecCCCCEEEE--ecC
Confidence 9999998866666666789999999999999987 6899999998777665443 356788899977777776 344
Q ss_pred CceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccC
Q 014755 200 EYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEV 278 (419)
Q Consensus 200 ~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (419)
.|.|.+... .-+++..++.|.. ...|+.|+|+|+++|+|+.|-.+.+||+...-+++.+.
T Consensus 168 lG~v~ILsypsLkpv~si~AH~s--nCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~is----------------- 228 (313)
T KOG1407|consen 168 LGCVEILSYPSLKPVQSIKAHPS--NCICIEFDPDGRYFATGSADALVSLWDVDELICERCIS----------------- 228 (313)
T ss_pred CceEEEEeccccccccccccCCc--ceEEEEECCCCceEeeccccceeeccChhHhhhheeec-----------------
Confidence 689999988 7788888888876 79999999999999999999999999998877776654
Q ss_pred CCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCce
Q 014755 279 DEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTT 358 (419)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~ 358 (419)
-+.-+|..+.||.||++||+|++| ..
T Consensus 229 ----------------------------------------------------RldwpVRTlSFS~dg~~lASaSED--h~ 254 (313)
T KOG1407|consen 229 ----------------------------------------------------RLDWPVRTLSFSHDGRMLASASED--HF 254 (313)
T ss_pred ----------------------------------------------------cccCceEEEEeccCcceeeccCcc--ce
Confidence 144458999999999999999999 99
Q ss_pred EEEeeccCCCceeecccCCCeeEEEeCCCCCeEEEEeCC---------CcEEEeecC
Q 014755 359 LWIWDICRQEPAAILVQKDPIRAATWDPTCTRLVLCTGS---------SHLYMWTPS 406 (419)
Q Consensus 359 i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d---------g~i~vw~~~ 406 (419)
|-|=++++|..+..+.+.++...|+|+|...+||.+++| |.++++-+.
T Consensus 255 IDIA~vetGd~~~eI~~~~~t~tVAWHPk~~LLAyA~ddk~~d~~reag~vKiFG~~ 311 (313)
T KOG1407|consen 255 IDIAEVETGDRVWEIPCEGPTFTVAWHPKRPLLAYACDDKDGDSNREAGTVKIFGLS 311 (313)
T ss_pred EEeEecccCCeEEEeeccCCceeEEecCCCceeeEEecCCCCccccccceeEEecCC
Confidence 999999999999999999999999999999999988865 566666543
No 46
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=5.4e-34 Score=273.21 Aligned_cols=282 Identities=14% Similarity=0.215 Sum_probs=227.3
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCCC----c----EEEEeecCcceeEEEEec-CCCeEEEEeccCCeEEEEEccCCcc
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHSF----K----VVQLFSCLDKISYIEWAL-DSEYILCGLYKRLMIQAWSLTQPEW 82 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~~----~----~~~~~~~~~~v~~~~~s~-~~~~l~~~~~~~g~i~iw~~~~~~~ 82 (419)
++|+|+|++||+|+ |+.|+||+.... . ....+.+...+.+++|+| ++.+|++++.| |+|++||+.+++.
T Consensus 489 i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~D-g~v~lWd~~~~~~ 567 (793)
T PLN00181 489 IGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFE-GVVQVWDVARSQL 567 (793)
T ss_pred EEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEeCC-CeEEEEECCCCeE
Confidence 78999999999998 889999997542 1 222344567899999987 47889998876 8999999999988
Q ss_pred eeeeecCCccEeEEEECC-CCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEc-cCCCEEEEEeecCCCCeEE
Q 014755 83 TCKIDEGLAGIAYARWSP-DSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFT-QDGKFAAICTRRDCKDYIN 160 (419)
Q Consensus 83 ~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~g~v~ 160 (419)
+..+..|...|.+++|+| ++.+|++++.|+ .|++||++++...........+.++.|+ +++.++++++.| |.|+
T Consensus 568 ~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg-~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~g~~latgs~d---g~I~ 643 (793)
T PLN00181 568 VTEMKEHEKRVWSIDYSSADPTLLASGSDDG-SVKLWSINQGVSIGTIKTKANICCVQFPSESGRSLAFGSAD---HKVY 643 (793)
T ss_pred EEEecCCCCCEEEEEEcCCCCCEEEEEcCCC-EEEEEECCCCcEEEEEecCCCeEEEEEeCCCCCEEEEEeCC---CeEE
Confidence 888999999999999997 788999999988 9999999998877633344678899995 568999999887 8999
Q ss_pred EEeccCCe-EEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCC-------CceEEEEeecCCCCceeEEEEcc
Q 014755 161 LLSCHTWE-IMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPD-------GRCLLKYQAYESGLGVKSISWSP 232 (419)
Q Consensus 161 i~d~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~-------~~~~~~~~~~~~~~~v~~~~~s~ 232 (419)
+||+++.+ .+..+..|...|.++.|. ++..+++ ++.|+.|++||+. ...+..+.+|.. .+..++|+|
T Consensus 644 iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs--~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~--~i~~v~~s~ 718 (793)
T PLN00181 644 YYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVS--SSTDNTLKLWDLSMSISGINETPLHSFMGHTN--VKNFVGLSV 718 (793)
T ss_pred EEECCCCCccceEecCCCCCEEEEEEe-CCCEEEE--EECCCEEEEEeCCCCccccCCcceEEEcCCCC--CeeEEEEcC
Confidence 99998765 466778899999999997 6777777 5679999999983 245677777665 789999999
Q ss_pred CCCeEEEEEecCcEEEEEcCCceeeeeec--ccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEE
Q 014755 233 CGQFLAVGSYDQTLRVLNHLTWKTFAEFM--HLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVR 310 (419)
Q Consensus 233 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (419)
++++|++|+.|+.|++|+.....++..+. ....+.
T Consensus 719 ~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~------------------------------------------- 755 (793)
T PLN00181 719 SDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVS------------------------------------------- 755 (793)
T ss_pred CCCEEEEEeCCCEEEEEECCCCCceEEEecccCCccc-------------------------------------------
Confidence 99999999999999999987655443332 110000
Q ss_pred EEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeec
Q 014755 311 YEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDI 364 (419)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~ 364 (419)
......|...|.+++|+|++..|++|+.+ |.|+||++
T Consensus 756 ---------------~~~~~~~~~~V~~v~ws~~~~~lva~~~d--G~I~i~~~ 792 (793)
T PLN00181 756 ---------------GLEVDDASQFISSVCWRGQSSTLVAANST--GNIKILEM 792 (793)
T ss_pred ---------------ccccCCCCcEEEEEEEcCCCCeEEEecCC--CcEEEEec
Confidence 00012356679999999999999999999 99999986
No 47
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=1.5e-34 Score=249.78 Aligned_cols=312 Identities=15% Similarity=0.178 Sum_probs=261.8
Q ss_pred eEEcCCC---CEEEEEeCCeEEEEecCC-CcE---------EEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccC
Q 014755 13 SCFSPNA---RYIAVAVDYRLVVRDAHS-FKV---------VQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQ 79 (419)
Q Consensus 13 ~~~s~d~---~~la~~~~~~i~i~~~~~-~~~---------~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~ 79 (419)
+.+-|++ +.|+.-.++++..|.++. +.. +...+|...|.++++|.+...+++++. +.+++|+..+
T Consensus 326 ~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sga~--~SikiWn~~t 403 (888)
T KOG0306|consen 326 FDVTPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSILLASGAG--ESIKIWNRDT 403 (888)
T ss_pred EEEEecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCceeeeecCC--CcEEEEEccC
Confidence 4555544 345555678888887764 332 335569999999999999988888874 5899999999
Q ss_pred CcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCe
Q 014755 80 PEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDY 158 (419)
Q Consensus 80 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~ 158 (419)
.++++++... .+.+..|.|.++++++|...| .+.+||+.+...+. +..|.+.+..++.+||++.+++++.| .+
T Consensus 404 ~kciRTi~~~--y~l~~~Fvpgd~~Iv~G~k~G-el~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saD---kt 477 (888)
T KOG0306|consen 404 LKCIRTITCG--YILASKFVPGDRYIVLGTKNG-ELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSAD---KT 477 (888)
T ss_pred cceeEEeccc--cEEEEEecCCCceEEEeccCC-ceEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCC---cE
Confidence 9999888654 788999999999999998877 99999999987776 77899999999999999999999998 89
Q ss_pred EEEEeccC-----CeEEEEEe-------ccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCce
Q 014755 159 INLLSCHT-----WEIMGVFA-------VDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGV 225 (419)
Q Consensus 159 v~i~d~~~-----~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v 225 (419)
|++||..- +...+.+. .-+..|.|+.+||||+++++ +--|+++++|-+ +-+....+.+|.- +|
T Consensus 478 VkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaV--sLLdnTVkVyflDtlKFflsLYGHkL--PV 553 (888)
T KOG0306|consen 478 VKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAV--SLLDNTVKVYFLDTLKFFLSLYGHKL--PV 553 (888)
T ss_pred EEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEE--EeccCeEEEEEecceeeeeeeccccc--ce
Confidence 99999742 11111111 12467999999999999999 677999999998 6666666666655 99
Q ss_pred eEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCC
Q 014755 226 KSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNG 305 (419)
Q Consensus 226 ~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (419)
.||..|||++.+++||.|..|++|-+.=|.|.+.+-
T Consensus 554 ~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~f-------------------------------------------- 589 (888)
T KOG0306|consen 554 LSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFF-------------------------------------------- 589 (888)
T ss_pred eEEeccCCcCeEEeccCCCceEEeccccchhhhhhh--------------------------------------------
Confidence 999999999999999999999999998887766653
Q ss_pred ceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec-ccCCCeeEEEe
Q 014755 306 HIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL-VQKDPIRAATW 384 (419)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~-~~~~~v~~~~~ 384 (419)
+|.+.|.++.|-|....+.+++.| +.|+-||-..-+.++.+ +|...|+|++.
T Consensus 590 -------------------------AHdDSvm~V~F~P~~~~FFt~gKD--~kvKqWDg~kFe~iq~L~~H~~ev~cLav 642 (888)
T KOG0306|consen 590 -------------------------AHDDSVMSVQFLPKTHLFFTCGKD--GKVKQWDGEKFEEIQKLDGHHSEVWCLAV 642 (888)
T ss_pred -------------------------cccCceeEEEEcccceeEEEecCc--ceEEeechhhhhhheeeccchheeeeeEE
Confidence 588889999999999999999999 99999999887777666 69999999999
Q ss_pred CCCCCeEEEEeCCCcEEEeecCC
Q 014755 385 DPTCTRLVLCTGSSHLYMWTPSG 407 (419)
Q Consensus 385 s~~~~~l~s~~~dg~i~vw~~~~ 407 (419)
+|+|.+++|+|.|.+|++|....
T Consensus 643 ~~~G~~vvs~shD~sIRlwE~td 665 (888)
T KOG0306|consen 643 SPNGSFVVSSSHDKSIRLWERTD 665 (888)
T ss_pred cCCCCeEEeccCCceeEeeeccC
Confidence 99999999999999999998764
No 48
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.2e-34 Score=216.85 Aligned_cols=278 Identities=16% Similarity=0.257 Sum_probs=238.4
Q ss_pred EeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC
Q 014755 43 LFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN 122 (419)
Q Consensus 43 ~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~ 122 (419)
+-.+.++|..+.|+-||+|.++++.| .+|++|+...+.++++..+|..+|..++.+.|+..+++++.|. .+.+||+++
T Consensus 13 l~~~qgaV~avryN~dGnY~ltcGsd-rtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk-~v~vwDV~T 90 (307)
T KOG0316|consen 13 LDCAQGAVRAVRYNVDGNYCLTCGSD-RTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDK-AVQVWDVNT 90 (307)
T ss_pred ecccccceEEEEEccCCCEEEEcCCC-ceEEeecccccceeeeecCCCceeeeccccccccccccCCCCc-eEEEEEccc
Confidence 34588999999999999999999988 5999999999999999999999999999999999999999998 999999999
Q ss_pred CeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC--CeEEEEEeccccceeeeeECCCCCeEEEEcCCC
Q 014755 123 TACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT--WEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPL 199 (419)
Q Consensus 123 ~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~ 199 (419)
|+..+ +.+|...|+.+.|+.+...+++++.| ..+++||.++ .++++.+......|.++..+ +..|+. ++.
T Consensus 91 Gkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD---~s~r~wDCRS~s~ePiQildea~D~V~Si~v~--~heIva--GS~ 163 (307)
T KOG0316|consen 91 GKVDRRFRGHLAQVNTVRFNEESSVVASGSFD---SSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA--EHEIVA--GSV 163 (307)
T ss_pred CeeeeecccccceeeEEEecCcceEEEecccc---ceeEEEEcccCCCCccchhhhhcCceeEEEec--ccEEEe--ecc
Confidence 99988 99999999999999999999999997 7999999986 56788888777888888875 445665 788
Q ss_pred CceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeec-ccccccCCCccceecc
Q 014755 200 EYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFM-HLSTVRGPCFPAVFKE 277 (419)
Q Consensus 200 ~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 277 (419)
||+++.||+ .|+....+-+ + +|+++.|+++++..+.++.|+++++.|-.+|+.++.+. |...-
T Consensus 164 DGtvRtydiR~G~l~sDy~g--~--pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~e----------- 228 (307)
T KOG0316|consen 164 DGTVRTYDIRKGTLSSDYFG--H--PITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNME----------- 228 (307)
T ss_pred CCcEEEEEeecceeehhhcC--C--cceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccce-----------
Confidence 999999999 7776554443 3 79999999999999999999999999999999998876 32211
Q ss_pred CCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCc
Q 014755 278 VDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPT 357 (419)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~ 357 (419)
| -...+++.....+++|++| |
T Consensus 229 ---------------------------------y------------------------kldc~l~qsdthV~sgSED--G 249 (307)
T KOG0316|consen 229 ---------------------------------Y------------------------KLDCCLNQSDTHVFSGSED--G 249 (307)
T ss_pred ---------------------------------e------------------------eeeeeecccceeEEeccCC--c
Confidence 1 2346777778899999999 9
Q ss_pred eEEEeeccCCCceeecc-cCCC-eeEEEeCCCCCeEEEEeCCCcEEEee
Q 014755 358 TLWIWDICRQEPAAILV-QKDP-IRAATWDPTCTRLVLCTGSSHLYMWT 404 (419)
Q Consensus 358 ~i~iwd~~~~~~~~~~~-~~~~-v~~~~~s~~~~~l~s~~~dg~i~vw~ 404 (419)
.|++||+....++..+. +... |.+++++|.-..++++.. +.+..|.
T Consensus 250 ~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~-~~~~~~~ 297 (307)
T KOG0316|consen 250 KVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMDDFITATG-HGDLFWY 297 (307)
T ss_pred eEEEEEeccceeeeeeccCCceeEEeeecccCccceeEecC-Cceecee
Confidence 99999999999888876 4455 789999999887777754 4455664
No 49
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.3e-34 Score=245.34 Aligned_cols=278 Identities=14% Similarity=0.239 Sum_probs=250.4
Q ss_pred ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCe
Q 014755 45 SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTA 124 (419)
Q Consensus 45 ~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~ 124 (419)
.+.+.|.++.|+|...+++++-.+ |.|.||+.++...++.+.-..-+|.+..|-+..+.+++|++|. .|++|+..+++
T Consensus 11 ~rSdRVKsVd~HPtePw~la~Lyn-G~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~-~IrVfnynt~e 88 (794)
T KOG0276|consen 11 SRSDRVKSVDFHPTEPWILAALYN-GDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDM-QIRVFNYNTGE 88 (794)
T ss_pred ccCCceeeeecCCCCceEEEeeec-CeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCc-eEEEEecccce
Confidence 478899999999999999999887 9999999999999988888888999999999999999999887 99999999998
Q ss_pred EEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC-CeEEEEEeccccceeeeeECCCC-CeEEEEcCCCCc
Q 014755 125 CVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT-WEIMGVFAVDTLDLADIEWSPDD-SAIVIWDSPLEY 201 (419)
Q Consensus 125 ~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~~ 201 (419)
.+. +..|..-+++++.+|...++++++.| -.|++||.+. +.+.+.+.+|...|.+++|+|.. +.++. ++-|+
T Consensus 89 kV~~FeAH~DyIR~iavHPt~P~vLtsSDD---m~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS--~sLDr 163 (794)
T KOG0276|consen 89 KVKTFEAHSDYIRSIAVHPTLPYVLTSSDD---MTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFAS--ASLDR 163 (794)
T ss_pred eeEEeeccccceeeeeecCCCCeEEecCCc---cEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceee--eeccc
Confidence 888 99999999999999999999999987 7999999976 67888999999999999999965 45555 67899
Q ss_pred eEEEEcC-CCceEEEEeecCCCCceeEEEEccCC--CeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccC
Q 014755 202 KVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCG--QFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEV 278 (419)
Q Consensus 202 ~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (419)
+|++|++ +..+..++.+|.. .|+++.+-+-| .+|++|+.|.+|+|||..+.+|+++++
T Consensus 164 TVKVWslgs~~~nfTl~gHek--GVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLe----------------- 224 (794)
T KOG0276|consen 164 TVKVWSLGSPHPNFTLEGHEK--GVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLE----------------- 224 (794)
T ss_pred cEEEEEcCCCCCceeeecccc--CcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhh-----------------
Confidence 9999999 7788888888777 89999998855 699999999999999999999988865
Q ss_pred CCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCce
Q 014755 279 DEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTT 358 (419)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~ 358 (419)
+|...|..+.|+|.-.++++|++| |+
T Consensus 225 ----------------------------------------------------GHt~Nvs~v~fhp~lpiiisgsED--GT 250 (794)
T KOG0276|consen 225 ----------------------------------------------------GHTNNVSFVFFHPELPIIISGSED--GT 250 (794)
T ss_pred ----------------------------------------------------cccccceEEEecCCCcEEEEecCC--cc
Confidence 678889999999999999999999 99
Q ss_pred EEEeeccCCCceeecc-cCCCeeEEEeCCCCCeEEEEeCCCcEEE
Q 014755 359 LWIWDICRQEPAAILV-QKDPIRAATWDPTCTRLVLCTGSSHLYM 402 (419)
Q Consensus 359 i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~v 402 (419)
++||+..+-++...+. .-++++|++-.+.++.++.|.+.|.|.+
T Consensus 251 vriWhs~Ty~lE~tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~v 295 (794)
T KOG0276|consen 251 VRIWNSKTYKLEKTLNYGLERVWCIAAHKGDGKIAVGFDEGSVTV 295 (794)
T ss_pred EEEecCcceehhhhhhcCCceEEEEeecCCCCeEEEeccCCcEEE
Confidence 9999999988877776 6678999999999888888887776544
No 50
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.9e-34 Score=215.71 Aligned_cols=239 Identities=10% Similarity=0.119 Sum_probs=213.0
Q ss_pred CeEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecC
Q 014755 12 PSCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEG 89 (419)
Q Consensus 12 ~~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~ 89 (419)
.+.|+-||+|.++++ |.+|++|+...+.+++++. |...|..++.+.|...+++++.| ..+.+||+++|+..+++.+|
T Consensus 22 avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgD-k~v~vwDV~TGkv~Rr~rgH 100 (307)
T KOG0316|consen 22 AVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGD-KAVQVWDVNTGKVDRRFRGH 100 (307)
T ss_pred EEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCC-ceEEEEEcccCeeeeecccc
Confidence 378999999999886 8899999999999999876 88899999999999999999988 59999999999999999999
Q ss_pred CccEeEEEECCCCCEEEEEecCCCeEEEEEcCCC--eEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC
Q 014755 90 LAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNT--ACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT 166 (419)
Q Consensus 90 ~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~--~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~ 166 (419)
.+.|+.++|+.+...+++++-|. .+++||.++. ++++ +......|.++..+ +..|+.|+.| |+++.||++.
T Consensus 101 ~aqVNtV~fNeesSVv~SgsfD~-s~r~wDCRS~s~ePiQildea~D~V~Si~v~--~heIvaGS~D---GtvRtydiR~ 174 (307)
T KOG0316|consen 101 LAQVNTVRFNEESSVVASGSFDS-SVRLWDCRSRSFEPIQILDEAKDGVSSIDVA--EHEIVAGSVD---GTVRTYDIRK 174 (307)
T ss_pred cceeeEEEecCcceEEEeccccc-eeEEEEcccCCCCccchhhhhcCceeEEEec--ccEEEeeccC---CcEEEEEeec
Confidence 99999999999999999999988 9999999874 4555 66677788888875 4578888887 8999999999
Q ss_pred CeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCc
Q 014755 167 WEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQT 245 (419)
Q Consensus 167 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~ 245 (419)
|+....+.+ .+|+++.|+++++..++ +..++.+++.|. +|++++.+.+|.....-...+++.....+++|++||.
T Consensus 175 G~l~sDy~g--~pit~vs~s~d~nc~La--~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~ 250 (307)
T KOG0316|consen 175 GTLSSDYFG--HPITSVSFSKDGNCSLA--SSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGK 250 (307)
T ss_pred ceeehhhcC--CcceeEEecCCCCEEEE--eeccceeeecccchhHHHHHhcccccceeeeeeeecccceeEEeccCCce
Confidence 988776655 58999999999999988 777999999999 9999999999887666677888888889999999999
Q ss_pred EEEEEcCCceeeeeec
Q 014755 246 LRVLNHLTWKTFAEFM 261 (419)
Q Consensus 246 i~v~d~~~~~~~~~~~ 261 (419)
|++||+...+.+..+.
T Consensus 251 Vy~wdLvd~~~~sk~~ 266 (307)
T KOG0316|consen 251 VYFWDLVDETQISKLS 266 (307)
T ss_pred EEEEEeccceeeeeec
Confidence 9999999888877776
No 51
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=100.00 E-value=6.9e-36 Score=245.53 Aligned_cols=273 Identities=11% Similarity=0.158 Sum_probs=231.2
Q ss_pred CeEEcC-CCCEEEEEe-CCeEEEEecCC-CcEEEEe-ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeee
Q 014755 12 PSCFSP-NARYIAVAV-DYRLVVRDAHS-FKVVQLF-SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKID 87 (419)
Q Consensus 12 ~~~~s~-d~~~la~~~-~~~i~i~~~~~-~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~ 87 (419)
++.|.| .+.+|++++ |+.|+||++-. +++++++ +|..+|.+++|+++|..+++++.| +.+++||+++|++...+.
T Consensus 219 ai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD-~~lKlwDtETG~~~~~f~ 297 (503)
T KOG0282|consen 219 AIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFD-RFLKLWDTETGQVLSRFH 297 (503)
T ss_pred hhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecc-eeeeeeccccceEEEEEe
Confidence 367888 889999998 99999999876 7777765 599999999999999999999998 799999999999887774
Q ss_pred cCCccEeEEEECCCC-CEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEecc
Q 014755 88 EGLAGIAYARWSPDS-RHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCH 165 (419)
Q Consensus 88 ~~~~~v~~~~~~~~~-~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~ 165 (419)
....++++.|.|++ +.+++|+.++ .|+.||+++++.++ +..|-..+..+.|-++|+++++.+.+ +++++|+.+
T Consensus 298 -~~~~~~cvkf~pd~~n~fl~G~sd~-ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDd---ks~riWe~~ 372 (503)
T KOG0282|consen 298 -LDKVPTCVKFHPDNQNIFLVGGSDK-KIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDD---KSVRIWENR 372 (503)
T ss_pred -cCCCceeeecCCCCCcEEEEecCCC-cEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccC---ccEEEEEcC
Confidence 34467999999999 5566666666 99999999999887 77788899999999999999999987 799999999
Q ss_pred CCeEEEEEe-ccccceeeeeECCCCCeEEEEcCCCCceEEEEcC----CCceEEEEeecCCCCceeEEEEccCCCeEEEE
Q 014755 166 TWEIMGVFA-VDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP----DGRCLLKYQAYESGLGVKSISWSPCGQFLAVG 240 (419)
Q Consensus 166 ~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~----~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 240 (419)
....++... .+.....++..+|++++++. .+.++.|.+|.. .....+.+.+|.-.+.-..+.|||||.+|++|
T Consensus 373 ~~v~ik~i~~~~~hsmP~~~~~P~~~~~~a--Qs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SG 450 (503)
T KOG0282|consen 373 IPVPIKNIADPEMHTMPCLTLHPNGKWFAA--QSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSG 450 (503)
T ss_pred CCccchhhcchhhccCcceecCCCCCeehh--hccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEee
Confidence 877665543 33456788999999999988 777999999987 23444566777666678899999999999999
Q ss_pred EecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCC
Q 014755 241 SYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISL 320 (419)
Q Consensus 241 ~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (419)
+.||.+.+||.++-+.+..+.
T Consensus 451 dsdG~v~~wdwkt~kl~~~lk----------------------------------------------------------- 471 (503)
T KOG0282|consen 451 DSDGKVNFWDWKTTKLVSKLK----------------------------------------------------------- 471 (503)
T ss_pred cCCccEEEeechhhhhhhccc-----------------------------------------------------------
Confidence 999999999998877666653
Q ss_pred CCCCCCCCCCCCCcceEEEEEccC-CeEEEEecCCCCceEEEee
Q 014755 321 PFQKPPTDKPNPKQGIGLMSWSSD-SQYICTRNDSMPTTLWIWD 363 (419)
Q Consensus 321 ~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~~~~~d~~~~i~iwd 363 (419)
+|...+..+.|+|. ...+|+++.+ |.|++||
T Consensus 472 ----------ah~~~ci~v~wHP~e~Skvat~~w~--G~Ikiwd 503 (503)
T KOG0282|consen 472 ----------AHDQPCIGVDWHPVEPSKVATCGWD--GLIKIWD 503 (503)
T ss_pred ----------cCCcceEEEEecCCCcceeEecccC--ceeEecC
Confidence 47777899999996 4678999999 9999996
No 52
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=8e-36 Score=233.67 Aligned_cols=285 Identities=13% Similarity=0.238 Sum_probs=250.4
Q ss_pred eecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeee--------cCCccEeEEEECCCCCEEEEEecCCCeE
Q 014755 44 FSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKID--------EGLAGIAYARWSPDSRHILTTSDFQLRL 115 (419)
Q Consensus 44 ~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~~~~~~~~~i 115 (419)
++..+.+.|..|||||++|++|+.| |.|.+|+..+|+....++ -+..+|.|+.|+.|.+.+++++.|+ .|
T Consensus 210 Fg~KSh~EcA~FSPDgqyLvsgSvD-GFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDG-kI 287 (508)
T KOG0275|consen 210 FGQKSHVECARFSPDGQYLVSGSVD-GFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDG-KI 287 (508)
T ss_pred cccccchhheeeCCCCceEeecccc-ceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCC-cE
Confidence 3456778999999999999999987 999999999997655443 3567899999999999999999998 99
Q ss_pred EEEEcCCCeEEE-e-ccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEE
Q 014755 116 TVWSLLNTACVH-V-QSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIV 193 (419)
Q Consensus 116 ~iwd~~~~~~~~-~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 193 (419)
++|.+++|.+++ + ..|...++++.|+.|+..+++++.| .++++--+++|+.++.+++|...|+...|+++|..++
T Consensus 288 KvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD---~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~ii 364 (508)
T KOG0275|consen 288 KVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFD---QTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHII 364 (508)
T ss_pred EEEEEecchHHHHhhhhhccCeeEEEEccCcchhhccccc---ceEEEeccccchhHHHhcCccccccceEEcCCCCeEE
Confidence 999999999998 4 4788999999999999999999987 7999999999999999999999999999999999999
Q ss_pred EEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCC-CeEEEEEecCcEEEEEcCCceeeeeecccccccCCCc
Q 014755 194 IWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCG-QFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCF 271 (419)
Q Consensus 194 ~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~ 271 (419)
. +++||+|++|+. +++++.++.......+|.++-.-|.+ ..++++...++|++.++. |+.++.+.....
T Consensus 365 s--aSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~q-GQvVrsfsSGkR------ 435 (508)
T KOG0275|consen 365 S--ASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQ-GQVVRSFSSGKR------ 435 (508)
T ss_pred E--ecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEecc-ceEEeeeccCCc------
Confidence 8 788999999999 89999999887777789999888855 578888888999999965 677776642111
Q ss_pred cceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEe
Q 014755 272 PAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTR 351 (419)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 351 (419)
..+...+.+.||.|.++.+.
T Consensus 436 ------------------------------------------------------------EgGdFi~~~lSpkGewiYci 455 (508)
T KOG0275|consen 436 ------------------------------------------------------------EGGDFINAILSPKGEWIYCI 455 (508)
T ss_pred ------------------------------------------------------------cCCceEEEEecCCCcEEEEE
Confidence 12235567899999999999
Q ss_pred cCCCCceEEEeeccCCCceeecc-cCCCeeEEEeCCCCCeEEEEeCCCcEEEee
Q 014755 352 NDSMPTTLWIWDICRQEPAAILV-QKDPIRAATWDPTCTRLVLCTGSSHLYMWT 404 (419)
Q Consensus 352 ~~d~~~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~ 404 (419)
++| +.++.|...+|++..++. |...|-.++-+|..+.||+-++||.+++|.
T Consensus 456 gED--~vlYCF~~~sG~LE~tl~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 456 GED--GVLYCFSVLSGKLERTLPVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred ccC--cEEEEEEeecCceeeeeecccccccccccCcccchhhhhcccchhhhcC
Confidence 999 999999999999998886 999999999999999999999999999996
No 53
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=100.00 E-value=8.5e-34 Score=215.42 Aligned_cols=244 Identities=15% Similarity=0.197 Sum_probs=210.5
Q ss_pred ccccCeEEcCCCCEEEEEe-CCeEEEEecCCCcEEE---EeecCcceeEEEEec-CCCeEEEEeccCCeEEEEEccCCcc
Q 014755 8 KQTGPSCFSPNARYIAVAV-DYRLVVRDAHSFKVVQ---LFSCLDKISYIEWAL-DSEYILCGLYKRLMIQAWSLTQPEW 82 (419)
Q Consensus 8 ~~~~~~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~---~~~~~~~v~~~~~s~-~~~~l~~~~~~~g~i~iw~~~~~~~ 82 (419)
++...|+|+.+|..||+++ ++++.+|+++..+... ..+|.+.|-.++|+| ....+++++.+ .+|++||...+++
T Consensus 21 ~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~d-k~ir~wd~r~~k~ 99 (313)
T KOG1407|consen 21 QKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGD-KTIRIWDIRSGKC 99 (313)
T ss_pred hcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCC-ceEEEEEeccCcE
Confidence 4444599999999999998 8899999999876554 335888999999998 55678888877 5999999999999
Q ss_pred eeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEE
Q 014755 83 TCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLL 162 (419)
Q Consensus 83 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~ 162 (419)
...+....+. ..+.|+|+|+++++++.++ .|...|.++.+..........+..++|+-++.+++..... |.|.|.
T Consensus 100 ~~~i~~~~en-i~i~wsp~g~~~~~~~kdD-~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~Gl---G~v~IL 174 (313)
T KOG1407|consen 100 TARIETKGEN-INITWSPDGEYIAVGNKDD-RITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGL---GCVEIL 174 (313)
T ss_pred EEEeeccCcc-eEEEEcCCCCEEEEecCcc-cEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCC---ceEEEE
Confidence 8877554444 4588999999999999998 9999999998887766667778899999777777666543 899999
Q ss_pred eccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEE
Q 014755 163 SCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGS 241 (419)
Q Consensus 163 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 241 (419)
....-+++..++.|.....|+.|+|+|+++++ ++.|..+.+||+ .--+++.+..+.- +|..+.||.||++||+++
T Consensus 175 sypsLkpv~si~AH~snCicI~f~p~GryfA~--GsADAlvSLWD~~ELiC~R~isRldw--pVRTlSFS~dg~~lASaS 250 (313)
T KOG1407|consen 175 SYPSLKPVQSIKAHPSNCICIEFDPDGRYFAT--GSADALVSLWDVDELICERCISRLDW--PVRTLSFSHDGRMLASAS 250 (313)
T ss_pred eccccccccccccCCcceEEEEECCCCceEee--ccccceeeccChhHhhhheeeccccC--ceEEEEeccCcceeeccC
Confidence 99999999999999999999999999999999 888999999999 6677788877766 899999999999999999
Q ss_pred ecCcEEEEEcCCceeeeeec
Q 014755 242 YDQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 242 ~d~~i~v~d~~~~~~~~~~~ 261 (419)
+|..|-|=++++|..+.++.
T Consensus 251 EDh~IDIA~vetGd~~~eI~ 270 (313)
T KOG1407|consen 251 EDHFIDIAEVETGDRVWEIP 270 (313)
T ss_pred ccceEEeEecccCCeEEEee
Confidence 99999999999998888775
No 54
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=9.5e-36 Score=233.24 Aligned_cols=278 Identities=17% Similarity=0.242 Sum_probs=240.9
Q ss_pred ccccCeEEcCCCCEEEEEe-CCeEEEEecCCCcEEEE---------eecCcceeEEEEecCCCeEEEEeccCCeEEEEEc
Q 014755 8 KQTGPSCFSPNARYIAVAV-DYRLVVRDAHSFKVVQL---------FSCLDKISYIEWALDSEYILCGLYKRLMIQAWSL 77 (419)
Q Consensus 8 ~~~~~~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~---------~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~ 77 (419)
.|..+..|||||+||++|+ ||-|.+||..+|++.+- .-+.++|.|+.||.|...||+|+.| |.|++|.+
T Consensus 214 Sh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqD-GkIKvWri 292 (508)
T KOG0275|consen 214 SHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQD-GKIKVWRI 292 (508)
T ss_pred cchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcC-CcEEEEEE
Confidence 4556678999999999999 99999999999987652 2367899999999999999999987 99999999
Q ss_pred cCCcceeeee-cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCC
Q 014755 78 TQPEWTCKID-EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDC 155 (419)
Q Consensus 78 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 155 (419)
.+|.+++++. .|...|+++.|+.|+..+++++.|. ++++.-+++|+++. +.+|..-++...|.+||.++++++.|
T Consensus 293 ~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~-tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsD-- 369 (508)
T KOG0275|consen 293 ETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQ-TVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSD-- 369 (508)
T ss_pred ecchHHHHhhhhhccCeeEEEEccCcchhhcccccc-eEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCC--
Confidence 9999999887 7999999999999999999999998 99999999999998 99999999999999999999999987
Q ss_pred CCeEEEEeccCCeEEEEEecc--ccceeeeeECCCC-CeEEEEcCCCCceEEEEcCCCceEEEEeecC-CCCceeEEEEc
Q 014755 156 KDYINLLSCHTWEIMGVFAVD--TLDLADIEWSPDD-SAIVIWDSPLEYKVLIYSPDGRCLLKYQAYE-SGLGVKSISWS 231 (419)
Q Consensus 156 ~g~v~i~d~~~~~~~~~~~~~--~~~v~~~~~~~~~-~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~v~~~~~s 231 (419)
|+|++|+.++.+++..++.. +.+|..+..-|.+ ..+++ +...+++++.++.|+.++.+.... ..+...+...|
T Consensus 370 -gtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iV--CNrsntv~imn~qGQvVrsfsSGkREgGdFi~~~lS 446 (508)
T KOG0275|consen 370 -GTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIV--CNRSNTVYIMNMQGQVVRSFSSGKREGGDFINAILS 446 (508)
T ss_pred -ccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEE--EcCCCeEEEEeccceEEeeeccCCccCCceEEEEec
Confidence 89999999999998887753 4567888777765 45555 566789999999999999986543 22356678899
Q ss_pred cCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEE
Q 014755 232 PCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRY 311 (419)
Q Consensus 232 ~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (419)
|.|.++++.++|+.++.|.+.+|+..+++.
T Consensus 447 pkGewiYcigED~vlYCF~~~sG~LE~tl~-------------------------------------------------- 476 (508)
T KOG0275|consen 447 PKGEWIYCIGEDGVLYCFSVLSGKLERTLP-------------------------------------------------- 476 (508)
T ss_pred CCCcEEEEEccCcEEEEEEeecCceeeeee--------------------------------------------------
Confidence 999999999999999999999998877765
Q ss_pred EeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEee
Q 014755 312 EVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWD 363 (419)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd 363 (419)
-|...+-.++-+|..+.||+-++| |.+++|.
T Consensus 477 -------------------VhEkdvIGl~HHPHqNllAsYsED--gllKLWk 507 (508)
T KOG0275|consen 477 -------------------VHEKDVIGLTHHPHQNLLASYSED--GLLKLWK 507 (508)
T ss_pred -------------------cccccccccccCcccchhhhhccc--chhhhcC
Confidence 133335567888999999999999 9999994
No 55
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=100.00 E-value=4.7e-36 Score=236.88 Aligned_cols=269 Identities=12% Similarity=0.239 Sum_probs=229.4
Q ss_pred CcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEE
Q 014755 47 LDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACV 126 (419)
Q Consensus 47 ~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~ 126 (419)
...|+|+.+. ...+++|..| ++|+|||.++..+...+.+|.+.|.|+.| +.+.+++|+.|. +|++||.++++++
T Consensus 197 skgVYClQYD--D~kiVSGlrD-nTikiWD~n~~~c~~~L~GHtGSVLCLqy--d~rviisGSSDs-TvrvWDv~tge~l 270 (499)
T KOG0281|consen 197 SKGVYCLQYD--DEKIVSGLRD-NTIKIWDKNSLECLKILTGHTGSVLCLQY--DERVIVSGSSDS-TVRVWDVNTGEPL 270 (499)
T ss_pred CCceEEEEec--chhhhccccc-CceEEeccccHHHHHhhhcCCCcEEeeec--cceEEEecCCCc-eEEEEeccCCchh
Confidence 4679999886 4578899877 69999999999999999999999999998 456889999888 9999999999999
Q ss_pred E-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCe---EEEEEeccccceeeeeECCCCCeEEEEcCCCCce
Q 014755 127 H-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWE---IMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYK 202 (419)
Q Consensus 127 ~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~ 202 (419)
. +..|...|..+.|+. .++++++.| .++.+||+.... +.+.+.+|...|+.+.|+ .++++. ++.|.+
T Consensus 271 ~tlihHceaVLhlrf~n--g~mvtcSkD---rsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVs--ASgDRT 341 (499)
T KOG0281|consen 271 NTLIHHCEAVLHLRFSN--GYMVTCSKD---RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVS--ASGDRT 341 (499)
T ss_pred hHHhhhcceeEEEEEeC--CEEEEecCC---ceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEE--ecCCce
Confidence 8 888899999999974 589999987 799999998754 234577899999999985 457777 677999
Q ss_pred EEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCc
Q 014755 203 VLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEP 281 (419)
Q Consensus 203 i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (419)
|++|+. +++.++++.+|.. .|.|+.+ .|+++++|+.|.+|++||+..|.+++.++
T Consensus 342 ikvW~~st~efvRtl~gHkR--GIAClQY--r~rlvVSGSSDntIRlwdi~~G~cLRvLe-------------------- 397 (499)
T KOG0281|consen 342 IKVWSTSTCEFVRTLNGHKR--GIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLE-------------------- 397 (499)
T ss_pred EEEEeccceeeehhhhcccc--cceehhc--cCeEEEecCCCceEEEEeccccHHHHHHh--------------------
Confidence 999999 8999999988876 7878777 68899999999999999999999998876
Q ss_pred ccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEE
Q 014755 282 LQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWI 361 (419)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~i 361 (419)
+|..-|.++.| |.+.+++|+.| |+|++
T Consensus 398 -------------------------------------------------GHEeLvRciRF--d~krIVSGaYD--Gkikv 424 (499)
T KOG0281|consen 398 -------------------------------------------------GHEELVRCIRF--DNKRIVSGAYD--GKIKV 424 (499)
T ss_pred -------------------------------------------------chHHhhhheee--cCceeeecccc--ceEEE
Confidence 46666788888 45789999999 99999
Q ss_pred eeccCCCce----------eecccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCe
Q 014755 362 WDICRQEPA----------AILVQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAY 409 (419)
Q Consensus 362 wd~~~~~~~----------~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~ 409 (419)
||+..+.-. ....|.+.|..+.| |...+++++.|.+|.|||+..+.
T Consensus 425 Wdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQF--D~fqIvsssHddtILiWdFl~~~ 480 (499)
T KOG0281|consen 425 WDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWDFLNGP 480 (499)
T ss_pred EecccccCCcccccchHHHhhhhccceeEEEee--cceEEEeccCCCeEEEEEcCCCC
Confidence 999875422 23369999999999 66789999999999999997543
No 56
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.4e-33 Score=248.15 Aligned_cols=245 Identities=13% Similarity=0.193 Sum_probs=217.6
Q ss_pred ccccCeEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceee
Q 014755 8 KQTGPSCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCK 85 (419)
Q Consensus 8 ~~~~~~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~ 85 (419)
.....++|+|...+|.++- .|.|++||..-+.++..+. |.++|..+.|+|++.++++|+.| -.|++|+..+.+++.+
T Consensus 10 sRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDD-ykIkVWnYk~rrclft 88 (1202)
T KOG0292|consen 10 SRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDD-YKIKVWNYKTRRCLFT 88 (1202)
T ss_pred ccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCc-cEEEEEecccceehhh
Confidence 3444599999999999996 8999999999998887665 99999999999999999999855 7999999999999999
Q ss_pred eecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEec
Q 014755 86 IDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSC 164 (419)
Q Consensus 86 ~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~ 164 (419)
+.+|.+-|..+.|++.-.+|+++++|. +|+||+..+++++. +.+|.+.|.|..|+|....+++++-| .+|++||+
T Consensus 89 L~GHlDYVRt~~FHheyPWIlSASDDQ-TIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLD---QTVRVWDi 164 (1202)
T KOG0292|consen 89 LLGHLDYVRTVFFHHEYPWILSASDDQ-TIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLD---QTVRVWDI 164 (1202)
T ss_pred hccccceeEEeeccCCCceEEEccCCC-eEEEEeccCCceEEEEecCceEEEeeccCCccceEEEeccc---ceEEEEee
Confidence 999999999999999999999999998 99999999999999 99999999999999999999999998 79999998
Q ss_pred cCCe-----------------------------EEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCc---e
Q 014755 165 HTWE-----------------------------IMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGR---C 212 (419)
Q Consensus 165 ~~~~-----------------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~---~ 212 (419)
..-+ ....+.+|+..|+.++|+|.-..++. ++.|+.|++|..+.. .
T Consensus 165 sGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVS--G~DDRqVKlWrmnetKaWE 242 (1202)
T KOG0292|consen 165 SGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVS--GADDRQVKLWRMNETKAWE 242 (1202)
T ss_pred cchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEe--cCCcceeeEEEecccccee
Confidence 5310 12346789999999999999998888 888999999999433 2
Q ss_pred EEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeec
Q 014755 213 LLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 261 (419)
+.+..+|.+ .|.++-|+|...+|++.++|++|+|||+...+.++++.
T Consensus 243 vDtcrgH~n--nVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfr 289 (1202)
T KOG0292|consen 243 VDTCRGHYN--NVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFR 289 (1202)
T ss_pred ehhhhcccC--CcceEEecCccceeEecCCCccEEEEecccccceeeee
Confidence 334455555 89999999999999999999999999999999999886
No 57
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.4e-33 Score=239.11 Aligned_cols=241 Identities=15% Similarity=0.197 Sum_probs=218.5
Q ss_pred CeEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecC
Q 014755 12 PSCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEG 89 (419)
Q Consensus 12 ~~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~ 89 (419)
++.|+|...++.++- .|+|.|||.++...++.+. ..-+|.+..|-+..+++++|+.| ..|+||+..+++.+..+..|
T Consensus 18 sVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD-~~IrVfnynt~ekV~~FeAH 96 (794)
T KOG0276|consen 18 SVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDD-MQIRVFNYNTGEKVKTFEAH 96 (794)
T ss_pred eeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCC-ceEEEEecccceeeEEeecc
Confidence 388999999888885 9999999999999998887 66799999999999999999955 89999999999999999999
Q ss_pred CccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCe-EEE-eccCCCCeeeEEEccCC-CEEEEEeecCCCCeEEEEeccC
Q 014755 90 LAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTA-CVH-VQSPKHASKGVAFTQDG-KFAAICTRRDCKDYINLLSCHT 166 (419)
Q Consensus 90 ~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~-~~~-~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~g~v~i~d~~~ 166 (419)
.+-|.+++.+|...+++++++|- .|++||.+.+- +.+ +.+|.+-|.+++|+|.. +.+++++-| ++|++|.+.+
T Consensus 97 ~DyIR~iavHPt~P~vLtsSDDm-~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLD---rTVKVWslgs 172 (794)
T KOG0276|consen 97 SDYIRSIAVHPTLPYVLTSSDDM-TIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLD---RTVKVWSLGS 172 (794)
T ss_pred ccceeeeeecCCCCeEEecCCcc-EEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeecc---ccEEEEEcCC
Confidence 99999999999999999999887 99999999853 333 89999999999999965 889999987 8999999999
Q ss_pred CeEEEEEeccccceeeeeECCCC--CeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEec
Q 014755 167 WEIMGVFAVDTLDLADIEWSPDD--SAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYD 243 (419)
Q Consensus 167 ~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 243 (419)
..+..++++|+..|+++.+-+.| .+++. ++.|..+++||. +..+++++.+|.+ .|..+.|+|.-..|++|++|
T Consensus 173 ~~~nfTl~gHekGVN~Vdyy~~gdkpylIs--gaDD~tiKvWDyQtk~CV~TLeGHt~--Nvs~v~fhp~lpiiisgsED 248 (794)
T KOG0276|consen 173 PHPNFTLEGHEKGVNCVDYYTGGDKPYLIS--GADDLTIKVWDYQTKSCVQTLEGHTN--NVSFVFFHPELPIIISGSED 248 (794)
T ss_pred CCCceeeeccccCcceEEeccCCCcceEEe--cCCCceEEEeecchHHHHHHhhcccc--cceEEEecCCCcEEEEecCC
Confidence 99999999999999999998866 46666 888999999999 8889999999988 79999999999999999999
Q ss_pred CcEEEEEcCCceeeeeec
Q 014755 244 QTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 244 ~~i~v~d~~~~~~~~~~~ 261 (419)
|++|+|+..+.+...++.
T Consensus 249 GTvriWhs~Ty~lE~tLn 266 (794)
T KOG0276|consen 249 GTVRIWNSKTYKLEKTLN 266 (794)
T ss_pred ccEEEecCcceehhhhhh
Confidence 999999998877666654
No 58
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=100.00 E-value=1.3e-34 Score=225.34 Aligned_cols=293 Identities=14% Similarity=0.241 Sum_probs=240.0
Q ss_pred EEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccC------------C------cceeeeecCCccEeEEEECCCCC
Q 014755 42 QLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQ------------P------EWTCKIDEGLAGIAYARWSPDSR 103 (419)
Q Consensus 42 ~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~------------~------~~~~~~~~~~~~v~~~~~~~~~~ 103 (419)
.+..|.+++.+.+|+|||.++|+|+.| ..|+|+|++. + -.++++-.|..+|+++.|+|...
T Consensus 107 ylt~HK~~cR~aafs~DG~lvATGsaD-~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ 185 (430)
T KOG0640|consen 107 YLTSHKSPCRAAAFSPDGSLVATGSAD-ASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRET 185 (430)
T ss_pred EEeecccceeeeeeCCCCcEEEccCCc-ceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhh
Confidence 345699999999999999999999988 6999999861 1 23566778999999999999999
Q ss_pred EEEEEecCCCeEEEEEcCCCeEEE---eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEE---eccc
Q 014755 104 HILTTSDFQLRLTVWSLLNTACVH---VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVF---AVDT 177 (419)
Q Consensus 104 ~l~~~~~~~~~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~---~~~~ 177 (419)
.|++++.|+ +|+++|.......+ ......++.++.|+|.|.+|++|... ..+++||+++.++.... ..|.
T Consensus 186 ILiS~srD~-tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdH---p~~rlYdv~T~QcfvsanPd~qht 261 (430)
T KOG0640|consen 186 ILISGSRDN-TVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDH---PTLRLYDVNTYQCFVSANPDDQHT 261 (430)
T ss_pred eEEeccCCC-eEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCC---CceeEEeccceeEeeecCcccccc
Confidence 999999998 99999998644333 44556788999999999999999875 69999999998776543 3477
Q ss_pred cceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCcee
Q 014755 178 LDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKT 256 (419)
Q Consensus 178 ~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~ 256 (419)
+.|+++.+++.++..+. ++.||.|++||- +++++.++....+...|.+..|..+|+||++.+.|..+++|++.++++
T Consensus 262 ~ai~~V~Ys~t~~lYvT--aSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~ 339 (430)
T KOG0640|consen 262 GAITQVRYSSTGSLYVT--ASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRM 339 (430)
T ss_pred cceeEEEecCCccEEEE--eccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCce
Confidence 89999999999999988 788999999998 899998886655556899999999999999999999999999999999
Q ss_pred eeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcce
Q 014755 257 FAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGI 336 (419)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 336 (419)
+..+...... +...--
T Consensus 340 l~~YtGAg~t----------------------------------------------------------------grq~~r 355 (430)
T KOG0640|consen 340 LKEYTGAGTT----------------------------------------------------------------GRQKHR 355 (430)
T ss_pred EEEEecCCcc----------------------------------------------------------------cchhhh
Confidence 9887522110 000001
Q ss_pred EEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec--ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 337 GLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL--VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 337 ~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
+...|.....|++.-.+ ..+.+.-||.++...+.+. +|.+.++.+.-||.+.-+++|++|..+++|--.
T Consensus 356 tqAvFNhtEdyVl~pDE-as~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWyrr 426 (430)
T KOG0640|consen 356 TQAVFNHTEDYVLFPDE-ASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWYRR 426 (430)
T ss_pred hhhhhcCccceEEcccc-ccCceeeccccchhhhhhcccCCCCCceEEEeCCCCCceeeecccceeeeeeec
Confidence 23445555566665554 2378999999998766554 799999999999999999999999999999644
No 59
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.3e-32 Score=212.82 Aligned_cols=288 Identities=13% Similarity=0.227 Sum_probs=236.4
Q ss_pred EEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEec--CCCeEEE
Q 014755 41 VQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSD--FQLRLTV 117 (419)
Q Consensus 41 ~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~~~~i~i 117 (419)
.+.+. ..+.|.++.|+++|.+|++++.|| +++|||..+++..+.+..++-.+..++|......++.++. |. +|+.
T Consensus 7 ak~f~~~~~~i~sl~fs~~G~~litss~dD-sl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~-tIry 84 (311)
T KOG1446|consen 7 AKVFRETNGKINSLDFSDDGLLLITSSEDD-SLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDD-TIRY 84 (311)
T ss_pred ccccccCCCceeEEEecCCCCEEEEecCCC-eEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCC-ceEE
Confidence 33344 367899999999999999988775 9999999999999999888888999999887777777764 55 9999
Q ss_pred EEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEc
Q 014755 118 WSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWD 196 (419)
Q Consensus 118 wd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 196 (419)
.++.+.+.++ +.+|...|.+++.+|-+..+++++.| ++|++||++..++...+.... -..++|.|.|-.+++
T Consensus 85 Lsl~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D---~tvrLWDlR~~~cqg~l~~~~--~pi~AfDp~GLifA~-- 157 (311)
T KOG1446|consen 85 LSLHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLD---KTVRLWDLRVKKCQGLLNLSG--RPIAAFDPEGLIFAL-- 157 (311)
T ss_pred EEeecCceEEEcCCCCceEEEEEecCCCCeEEecccC---CeEEeeEecCCCCceEEecCC--CcceeECCCCcEEEE--
Confidence 9999999999 99999999999999999999999987 799999999877766655433 345789999999988
Q ss_pred CCCCceEEEEcC---CCceEEEEeec-CCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeec-ccccccCCCc
Q 014755 197 SPLEYKVLIYSP---DGRCLLKYQAY-ESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFM-HLSTVRGPCF 271 (419)
Q Consensus 197 ~~~~~~i~~~d~---~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~ 271 (419)
+.....|++||+ +..+...+... ......+.+.|||||++|+.+...+.+++.|.-+|..+.++. ++..-
T Consensus 158 ~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~----- 232 (311)
T KOG1446|consen 158 ANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAG----- 232 (311)
T ss_pred ecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCC-----
Confidence 444459999999 45566666544 333478999999999999999999999999999999877775 22110
Q ss_pred cceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEe
Q 014755 272 PAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTR 351 (419)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 351 (419)
.--...+|+||++++++|
T Consensus 233 --------------------------------------------------------------~~~~~a~ftPds~Fvl~g 250 (311)
T KOG1446|consen 233 --------------------------------------------------------------NLPLSATFTPDSKFVLSG 250 (311)
T ss_pred --------------------------------------------------------------CcceeEEECCCCcEEEEe
Confidence 001467899999999999
Q ss_pred cCCCCceEEEeeccCCCceeec-c-cCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCC
Q 014755 352 NDSMPTTLWIWDICRQEPAAIL-V-QKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGA 408 (419)
Q Consensus 352 ~~d~~~~i~iwd~~~~~~~~~~-~-~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~ 408 (419)
+.| |+|.+|+++++..+... + +.+++.++.|+|.-.++|+++ ..+.+|=+...
T Consensus 251 s~d--g~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa~--s~l~fw~p~~~ 305 (311)
T KOG1446|consen 251 SDD--GTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSAS--SNLVFWLPDED 305 (311)
T ss_pred cCC--CcEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeecC--ceEEEEecccc
Confidence 999 99999999999877655 4 789999999999887777664 57888877643
No 60
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-32 Score=214.18 Aligned_cols=252 Identities=20% Similarity=0.264 Sum_probs=208.6
Q ss_pred hhhhcccccCeEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEec-cCCeEEEEEccC
Q 014755 3 FTEAYKQTGPSCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLY-KRLMIQAWSLTQ 79 (419)
Q Consensus 3 ~~~~~~~~~~~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~-~~g~i~iw~~~~ 79 (419)
|.+..++..++.|+++|.++++++ |+.++|||..+++.++.+. ++-.+..+.|......++.++. .|.+|+..++.+
T Consensus 10 f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~d 89 (311)
T KOG1446|consen 10 FRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHD 89 (311)
T ss_pred cccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeec
Confidence 344445666799999999999987 6799999999999999876 4567889999877777776664 235999999999
Q ss_pred CcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeE
Q 014755 80 PEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYI 159 (419)
Q Consensus 80 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v 159 (419)
.+.++.+.+|...|..++.+|-+..+++++.|+ +|++||++..+++.+.. ...-..++|.|.|-.+|++... ..|
T Consensus 90 NkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~-tvrLWDlR~~~cqg~l~-~~~~pi~AfDp~GLifA~~~~~---~~I 164 (311)
T KOG1446|consen 90 NKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDK-TVRLWDLRVKKCQGLLN-LSGRPIAAFDPEGLIFALANGS---ELI 164 (311)
T ss_pred CceEEEcCCCCceEEEEEecCCCCeEEecccCC-eEEeeEecCCCCceEEe-cCCCcceeECCCCcEEEEecCC---CeE
Confidence 999999999999999999999999999999998 99999999877776322 2233578999999999998864 589
Q ss_pred EEEeccCC--eEEEEEec---cccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCc-eeEEEEcc
Q 014755 160 NLLSCHTW--EIMGVFAV---DTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLG-VKSISWSP 232 (419)
Q Consensus 160 ~i~d~~~~--~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~-v~~~~~s~ 232 (419)
++||++.- .+...+.. .......+.|+|||+.+++ .+..+.+++.|. +|..+..+..+..... .....|+|
T Consensus 165 kLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLl--sT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftP 242 (311)
T KOG1446|consen 165 KLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILL--STNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTP 242 (311)
T ss_pred EEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEE--EeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECC
Confidence 99999873 33333333 3567899999999999999 666889999999 9999999887765432 25778999
Q ss_pred CCCeEEEEEecCcEEEEEcCCceeeeeec
Q 014755 233 CGQFLAVGSYDQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 233 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 261 (419)
|++++++|+.||+|.+|+++++..+..+.
T Consensus 243 ds~Fvl~gs~dg~i~vw~~~tg~~v~~~~ 271 (311)
T KOG1446|consen 243 DSKFVLSGSDDGTIHVWNLETGKKVAVLR 271 (311)
T ss_pred CCcEEEEecCCCcEEEEEcCCCcEeeEec
Confidence 99999999999999999999998887765
No 61
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=100.00 E-value=8.6e-35 Score=219.52 Aligned_cols=281 Identities=15% Similarity=0.176 Sum_probs=242.7
Q ss_pred cccccC---eEEcC---CCCEEEEEe-CCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEcc
Q 014755 7 YKQTGP---SCFSP---NARYIAVAV-DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLT 78 (419)
Q Consensus 7 ~~~~~~---~~~s~---d~~~la~~~-~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~ 78 (419)
-||..+ ++||| +|-+|++++ |+.=.+-+-++|..+-++. |.+.|++..+..+-...|+++.| =+-++||.-
T Consensus 11 ~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaad-ftakvw~a~ 89 (334)
T KOG0278|consen 11 HGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAAD-FTAKVWDAV 89 (334)
T ss_pred cCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhccc-chhhhhhhh
Confidence 367666 56765 899999998 7777777888888887664 99999999999998888888877 689999999
Q ss_pred CCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE--eccCCCCeeeEEEccCCCEEEEEeecCCC
Q 014755 79 QPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH--VQSPKHASKGVAFTQDGKFAAICTRRDCK 156 (419)
Q Consensus 79 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 156 (419)
+|..+..+ .|..-|..++|+.|.++|++++.++ .+++||++..+... +.+|...|..+.|....+.|++...+
T Consensus 90 tgdelhsf-~hkhivk~~af~~ds~~lltgg~ek-llrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd--- 164 (334)
T KOG0278|consen 90 TGDELHSF-EHKHIVKAVAFSQDSNYLLTGGQEK-LLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADD--- 164 (334)
T ss_pred hhhhhhhh-hhhheeeeEEecccchhhhccchHH-HhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccC---
Confidence 99888776 6888899999999999999999998 99999999755433 88999999999999888888888665
Q ss_pred CeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCC
Q 014755 157 DYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQ 235 (419)
Q Consensus 157 g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~ 235 (419)
++|++||.+++..++.+.. +.+|.++.++++|+++.+.. .+.|.+||. +-..++.+.... .|.+..++|+..
T Consensus 165 ~tVRLWD~rTgt~v~sL~~-~s~VtSlEvs~dG~ilTia~---gssV~Fwdaksf~~lKs~k~P~---nV~SASL~P~k~ 237 (334)
T KOG0278|consen 165 KTVRLWDHRTGTEVQSLEF-NSPVTSLEVSQDGRILTIAY---GSSVKFWDAKSFGLLKSYKMPC---NVESASLHPKKE 237 (334)
T ss_pred CceEEEEeccCcEEEEEec-CCCCcceeeccCCCEEEEec---CceeEEeccccccceeeccCcc---ccccccccCCCc
Confidence 8999999999999998876 47899999999999998844 568999999 777787777655 599999999999
Q ss_pred eEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEecc
Q 014755 236 FLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVME 315 (419)
Q Consensus 236 ~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (419)
.+++|++|..++.||..+++.+..+.
T Consensus 238 ~fVaGged~~~~kfDy~TgeEi~~~n------------------------------------------------------ 263 (334)
T KOG0278|consen 238 FFVAGGEDFKVYKFDYNTGEEIGSYN------------------------------------------------------ 263 (334)
T ss_pred eEEecCcceEEEEEeccCCceeeecc------------------------------------------------------
Confidence 99999999999999999988766531
Q ss_pred CCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCce
Q 014755 316 IPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPA 370 (419)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~ 370 (419)
.+|.++|.|+.|||||...|+|++| |+|+||.+..++..
T Consensus 264 --------------kgh~gpVhcVrFSPdGE~yAsGSED--GTirlWQt~~~~~~ 302 (334)
T KOG0278|consen 264 --------------KGHFGPVHCVRFSPDGELYASGSED--GTIRLWQTTPGKTY 302 (334)
T ss_pred --------------cCCCCceEEEEECCCCceeeccCCC--ceEEEEEecCCCch
Confidence 1588899999999999999999999 99999998876644
No 62
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.1e-33 Score=248.77 Aligned_cols=282 Identities=12% Similarity=0.237 Sum_probs=246.2
Q ss_pred cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeE
Q 014755 46 CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTAC 125 (419)
Q Consensus 46 ~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~ 125 (419)
.+..|..++|+|...+++++-.. |.|++||.+-+.++.++..|.++|..++|+|+...+++|++|- .|++|+.++.++
T Consensus 8 kSsRvKglsFHP~rPwILtslHs-G~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDy-kIkVWnYk~rrc 85 (1202)
T KOG0292|consen 8 KSSRVKGLSFHPKRPWILTSLHS-GVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDY-KIKVWNYKTRRC 85 (1202)
T ss_pred ccccccceecCCCCCEEEEeecC-ceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCcc-EEEEEeccccee
Confidence 45679999999999999999876 9999999999999999999999999999999999999999988 999999999999
Q ss_pred EE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEE
Q 014755 126 VH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVL 204 (419)
Q Consensus 126 ~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~ 204 (419)
+. +.+|-.-|..+.|++.-.+|++++.| .+|+||+..+++++..+.+|...|.|..|+|....++. ++-|.+|+
T Consensus 86 lftL~GHlDYVRt~~FHheyPWIlSASDD---QTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVS--aSLDQTVR 160 (1202)
T KOG0292|consen 86 LFTLLGHLDYVRTVFFHHEYPWILSASDD---QTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVS--ASLDQTVR 160 (1202)
T ss_pred hhhhccccceeEEeeccCCCceEEEccCC---CeEEEEeccCCceEEEEecCceEEEeeccCCccceEEE--ecccceEE
Confidence 88 89999999999999999999999987 79999999999999999999999999999999999988 77899999
Q ss_pred EEcCCCce------------------------------EEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCc
Q 014755 205 IYSPDGRC------------------------------LLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTW 254 (419)
Q Consensus 205 ~~d~~~~~------------------------------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~ 254 (419)
+||+.|-. .+.+.+|. ..|+-++|+|.-..|++|+.|..|++|..+.-
T Consensus 161 VWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHD--RGVNwaAfhpTlpliVSG~DDRqVKlWrmnet 238 (1202)
T KOG0292|consen 161 VWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHD--RGVNWAAFHPTLPLIVSGADDRQVKLWRMNET 238 (1202)
T ss_pred EEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccc--cccceEEecCCcceEEecCCcceeeEEEeccc
Confidence 99984411 11223333 38999999999999999999999999997643
Q ss_pred eeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCc
Q 014755 255 KTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQ 334 (419)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (419)
+.-.. .+..+|.+
T Consensus 239 KaWEv-------------------------------------------------------------------DtcrgH~n 251 (1202)
T KOG0292|consen 239 KAWEV-------------------------------------------------------------------DTCRGHYN 251 (1202)
T ss_pred cceee-------------------------------------------------------------------hhhhcccC
Confidence 21110 01236899
Q ss_pred ceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc-cCCCeeEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 335 GIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV-QKDPIRAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 335 ~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
.|+++-|+|...++++.++| ++|+|||+...+.+..+. ..+.-+.++-+|..+++| ++.|+.+.+|.++
T Consensus 252 nVssvlfhp~q~lIlSnsED--ksirVwDm~kRt~v~tfrrendRFW~laahP~lNLfA-AgHDsGm~VFkle 321 (1202)
T KOG0292|consen 252 NVSSVLFHPHQDLILSNSED--KSIRVWDMTKRTSVQTFRRENDRFWILAAHPELNLFA-AGHDSGMIVFKLE 321 (1202)
T ss_pred CcceEEecCccceeEecCCC--ccEEEEecccccceeeeeccCCeEEEEEecCCcceee-eecCCceEEEEEc
Confidence 99999999999999999999 999999999999888875 667899999999999776 5567777888776
No 63
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=100.00 E-value=4.9e-35 Score=231.16 Aligned_cols=274 Identities=16% Similarity=0.265 Sum_probs=226.0
Q ss_pred EEcCCCCEEEEEe-CCeEEEEecCCCcEEE-EeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCc
Q 014755 14 CFSPNARYIAVAV-DYRLVVRDAHSFKVVQ-LFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLA 91 (419)
Q Consensus 14 ~~s~d~~~la~~~-~~~i~i~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~ 91 (419)
++--|...+++|. |++|+|||..+..+++ +.+|++.|.|+.|. .+.+++|++| .+|++||+++++++.++..|..
T Consensus 202 ClQYDD~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd--~rviisGSSD-sTvrvWDv~tge~l~tlihHce 278 (499)
T KOG0281|consen 202 CLQYDDEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYD--ERVIVSGSSD-STVRVWDVNTGEPLNTLIHHCE 278 (499)
T ss_pred EEEecchhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeecc--ceEEEecCCC-ceEEEEeccCCchhhHHhhhcc
Confidence 3444566788887 8899999999888776 55799999999996 5588999987 7999999999999999999999
Q ss_pred cEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE----eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCC
Q 014755 92 GIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH----VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTW 167 (419)
Q Consensus 92 ~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~ 167 (419)
.|..+.|+. .++++++.|. ++.+||+.....+. +.+|...|+.+.|+ .+++++++.| .+|++|++.++
T Consensus 279 aVLhlrf~n--g~mvtcSkDr-siaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgD---RTikvW~~st~ 350 (499)
T KOG0281|consen 279 AVLHLRFSN--GYMVTCSKDR-SIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGD---RTIKVWSTSTC 350 (499)
T ss_pred eeEEEEEeC--CEEEEecCCc-eeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCC---ceEEEEeccce
Confidence 999999974 5899999998 99999998765433 67888999999986 4599999887 89999999999
Q ss_pred eEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcE
Q 014755 168 EIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTL 246 (419)
Q Consensus 168 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i 246 (419)
+.++.+.+|...|.|+.+ .+++++. +++|.+|++||+ .|.+++.+++|+. -|.++.| |.+.|++|+.||+|
T Consensus 351 efvRtl~gHkRGIAClQY--r~rlvVS--GSSDntIRlwdi~~G~cLRvLeGHEe--LvRciRF--d~krIVSGaYDGki 422 (499)
T KOG0281|consen 351 EFVRTLNGHKRGIACLQY--RDRLVVS--GSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRF--DNKRIVSGAYDGKI 422 (499)
T ss_pred eeehhhhcccccceehhc--cCeEEEe--cCCCceEEEEeccccHHHHHHhchHH--hhhheee--cCceeeeccccceE
Confidence 999999999999999886 4777777 888999999999 9999999999887 7999999 56799999999999
Q ss_pred EEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCC
Q 014755 247 RVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPP 326 (419)
Q Consensus 247 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (419)
+|||+.++..-+... ..++.
T Consensus 423 kvWdl~aaldpra~~---------~~~Cl--------------------------------------------------- 442 (499)
T KOG0281|consen 423 KVWDLQAALDPRAPA---------STLCL--------------------------------------------------- 442 (499)
T ss_pred EEEecccccCCcccc---------cchHH---------------------------------------------------
Confidence 999988754322111 01111
Q ss_pred CCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCce
Q 014755 327 TDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPA 370 (419)
Q Consensus 327 ~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~ 370 (419)
..+..|.+.|..+.|. ...+++.+.| .+|.|||...+...
T Consensus 443 ~~lv~hsgRVFrLQFD--~fqIvsssHd--dtILiWdFl~~~~~ 482 (499)
T KOG0281|consen 443 RTLVEHSGRVFRLQFD--EFQIISSSHD--DTILIWDFLNGPPS 482 (499)
T ss_pred HhhhhccceeEEEeec--ceEEEeccCC--CeEEEEEcCCCCcc
Confidence 1123477888888884 4677888887 99999998876543
No 64
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=100.00 E-value=8.7e-33 Score=220.66 Aligned_cols=287 Identities=19% Similarity=0.263 Sum_probs=234.7
Q ss_pred CCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCC---CEEEEEecCCC
Q 014755 37 SFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDS---RHILTTSDFQL 113 (419)
Q Consensus 37 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~~~~ 113 (419)
..+++..+.|.+.|.++... ++.+++|++| |.+++||. .|+...++.+|.++|.+++|-... ..+++++.|.
T Consensus 95 aP~pl~~~~hdDWVSsv~~~--~~~IltgsYD-g~~riWd~-~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dq- 169 (423)
T KOG0313|consen 95 APKPLQCFLHDDWVSSVKGA--SKWILTGSYD-GTSRIWDL-KGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQ- 169 (423)
T ss_pred CCCccccccchhhhhhhccc--CceEEEeecC-CeeEEEec-CCceEEEEecCCcceeeeEEEecCCccceEEEecCCc-
Confidence 44555666789999999988 7799999998 89999996 577788999999999988885433 3599999998
Q ss_pred eEEEEEcCCCeEEE-----eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC----------------------
Q 014755 114 RLTVWSLLNTACVH-----VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT---------------------- 166 (419)
Q Consensus 114 ~i~iwd~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~---------------------- 166 (419)
++++|..+.++... ..+|+..|.+++..++|..+++++.| ..|.+|+..+
T Consensus 170 tl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D---~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~ 246 (423)
T KOG0313|consen 170 TLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWD---TMLKIWSVETDEEDELESSSNRRRKKQKREKE 246 (423)
T ss_pred eEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeeccc---ceeeecccCCCccccccccchhhhhhhhhhhc
Confidence 99999988765433 35899999999999999999999998 7999999321
Q ss_pred ---CeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEe
Q 014755 167 ---WEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSY 242 (419)
Q Consensus 167 ---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 242 (419)
+.++..+.+|..+|.++.|++ ...++. ++-|.+|+.||+ ++.....+.... ..+++..+|..++|++|+.
T Consensus 247 ~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS--~SwDHTIk~WDletg~~~~~~~~~k---sl~~i~~~~~~~Ll~~gss 320 (423)
T KOG0313|consen 247 GGTRTPLVTLEGHTEPVSSVVWSD-ATVIYS--VSWDHTIKVWDLETGGLKSTLTTNK---SLNCISYSPLSKLLASGSS 320 (423)
T ss_pred ccccCceEEecccccceeeEEEcC-CCceEe--ecccceEEEEEeecccceeeeecCc---ceeEeecccccceeeecCC
Confidence 225566788999999999998 444555 678999999999 888887777654 6999999999999999999
Q ss_pred cCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCC
Q 014755 243 DQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPF 322 (419)
Q Consensus 243 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (419)
|..|++||.+++.--..
T Consensus 321 dr~irl~DPR~~~gs~v--------------------------------------------------------------- 337 (423)
T KOG0313|consen 321 DRHIRLWDPRTGDGSVV--------------------------------------------------------------- 337 (423)
T ss_pred CCceeecCCCCCCCcee---------------------------------------------------------------
Confidence 99999999887531100
Q ss_pred CCCCCCCCCCCcceEEEEEccCCe-EEEEecCCCCceEEEeeccCCC-ce-eecccCCCeeEEEeCCCCCeEEEEeCCCc
Q 014755 323 QKPPTDKPNPKQGIGLMSWSSDSQ-YICTRNDSMPTTLWIWDICRQE-PA-AILVQKDPIRAATWDPTCTRLVLCTGSSH 399 (419)
Q Consensus 323 ~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~d~~~~i~iwd~~~~~-~~-~~~~~~~~v~~~~~s~~~~~l~s~~~dg~ 399 (419)
.+.+.+|.++|.++.|+|... .|++++.| +++++||+++.+ ++ .+.+|...|.++.|+ ++..+++|+.|.+
T Consensus 338 ---~~s~~gH~nwVssvkwsp~~~~~~~S~S~D--~t~klWDvRS~k~plydI~~h~DKvl~vdW~-~~~~IvSGGaD~~ 411 (423)
T KOG0313|consen 338 ---SQSLIGHKNWVSSVKWSPTNEFQLVSGSYD--NTVKLWDVRSTKAPLYDIAGHNDKVLSVDWN-EGGLIVSGGADNK 411 (423)
T ss_pred ---EEeeecchhhhhheecCCCCceEEEEEecC--CeEEEEEeccCCCcceeeccCCceEEEEecc-CCceEEeccCcce
Confidence 111347999999999999664 57788888 999999999866 44 455799999999998 5668999999999
Q ss_pred EEEeecC
Q 014755 400 LYMWTPS 406 (419)
Q Consensus 400 i~vw~~~ 406 (419)
|+++.-.
T Consensus 412 l~i~~~~ 418 (423)
T KOG0313|consen 412 LRIFKGS 418 (423)
T ss_pred EEEeccc
Confidence 9998754
No 65
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=100.00 E-value=2.5e-31 Score=232.64 Aligned_cols=361 Identities=13% Similarity=0.151 Sum_probs=269.6
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEeecC-cceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeee-cC
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFSCL-DKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKID-EG 89 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~-~~ 89 (419)
+.=+|-=..+|.|. +|+|.|++++.++.+..+.|. ++|++++|..||..+.+.+...|.+.+||++..+.+..+. .|
T Consensus 208 ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah 287 (910)
T KOG1539|consen 208 IEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAH 287 (910)
T ss_pred eccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccc
Confidence 44566667888887 899999999999999999986 9999999999998877666555899999999988877766 67
Q ss_pred CccEeEEEECCCCCEEEEEecCCCeEEEEEcCC--Ce--EEE-eccCCCCeeeEEEc-cCCCEEEEEeec----------
Q 014755 90 LAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN--TA--CVH-VQSPKHASKGVAFT-QDGKFAAICTRR---------- 153 (419)
Q Consensus 90 ~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~--~~--~~~-~~~~~~~~~~~~~~-~~~~~l~~~~~~---------- 153 (419)
.+.|....|.|....+++++.|+ .+++|-..+ |. .++ ..+|..+..++.|. .+|..+.+++.|
T Consensus 288 ~~sv~~~~fl~~epVl~ta~~Dn-Slk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~ 366 (910)
T KOG1539|consen 288 YGSVTGATFLPGEPVLVTAGADN-SLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVIS 366 (910)
T ss_pred cCCcccceecCCCceEeeccCCC-ceeEEEeeCCCCcchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhH
Confidence 78999999999999999999887 888875553 32 222 45677777888876 556666666655
Q ss_pred ----------------------------------------------------CCCCeEEEEeccCCeEEE-EE-----ec
Q 014755 154 ----------------------------------------------------DCKDYINLLSCHTWEIMG-VF-----AV 175 (419)
Q Consensus 154 ----------------------------------------------------~~~g~v~i~d~~~~~~~~-~~-----~~ 175 (419)
.++...+.|+.+....-+ .+ +.
T Consensus 367 e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~ 446 (910)
T KOG1539|consen 367 ESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKK 446 (910)
T ss_pred HHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccc
Confidence 011234455554432211 11 11
Q ss_pred cccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEe-ecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCC
Q 014755 176 DTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQ-AYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLT 253 (419)
Q Consensus 176 ~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~ 253 (419)
....+.+++.++-|++.++ +.+.|.|-+|++ +|-....+. ...+..+|++++.+.-++.+++++.+|.+++||...
T Consensus 447 ~~~~~~av~vs~CGNF~~I--G~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~ 524 (910)
T KOG1539|consen 447 DDINATAVCVSFCGNFVFI--GYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKK 524 (910)
T ss_pred cCcceEEEEEeccCceEEE--eccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCC
Confidence 2356889999999999998 778999999999 776666662 223344899999999999999999999999999998
Q ss_pred ceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCC
Q 014755 254 WKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPK 333 (419)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (419)
...+..+.....+. .+.+... ...++ ...+......++.. ..+....+.+|.
T Consensus 525 k~l~~~l~l~~~~~----~iv~hr~-------s~l~a----------~~~ddf~I~vvD~~-------t~kvvR~f~gh~ 576 (910)
T KOG1539|consen 525 KVLKKSLRLGSSIT----GIVYHRV-------SDLLA----------IALDDFSIRVVDVV-------TRKVVREFWGHG 576 (910)
T ss_pred cceeeeeccCCCcc----eeeeeeh-------hhhhh----------hhcCceeEEEEEch-------hhhhhHHhhccc
Confidence 88777765322221 1111100 00000 11122333344433 234556677999
Q ss_pred cceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecccCCCeeEEEeCCCCCeEEEEeCC-CcEEEeecC
Q 014755 334 QGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCTRLVLCTGS-SHLYMWTPS 406 (419)
Q Consensus 334 ~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-g~i~vw~~~ 406 (419)
+.|++++|||||++|++++.| ++|++||+.++.++-.+.-..+.+++.|||+|.+||++..| ..|++|.=.
T Consensus 577 nritd~~FS~DgrWlisasmD--~tIr~wDlpt~~lID~~~vd~~~~sls~SPngD~LAT~Hvd~~gIylWsNk 648 (910)
T KOG1539|consen 577 NRITDMTFSPDGRWLISASMD--STIRTWDLPTGTLIDGLLVDSPCTSLSFSPNGDFLATVHVDQNGIYLWSNK 648 (910)
T ss_pred cceeeeEeCCCCcEEEEeecC--CcEEEEeccCcceeeeEecCCcceeeEECCCCCEEEEEEecCceEEEEEch
Confidence 999999999999999999998 99999999999999988889999999999999999999988 679999643
No 66
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.3e-32 Score=233.63 Aligned_cols=273 Identities=17% Similarity=0.221 Sum_probs=236.9
Q ss_pred eEEcCCCCEEEEEeCCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeec-CC
Q 014755 13 SCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDE-GL 90 (419)
Q Consensus 13 ~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~-~~ 90 (419)
+.|| ..+.||+|....|++|+..++++..+.. +...|+++.|+++|++|++|..+ |.|.|||..+.+.+..+.. |.
T Consensus 183 ldWs-s~n~laValg~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~-g~v~iwD~~~~k~~~~~~~~h~ 260 (484)
T KOG0305|consen 183 LDWS-SANVLAVALGQSVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSD-GTVQIWDVKEQKKTRTLRGSHA 260 (484)
T ss_pred hhcc-cCCeEEEEecceEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecC-CeEEEEehhhccccccccCCcC
Confidence 6788 4568999999899999999999887766 38899999999999999999977 8999999999988888888 89
Q ss_pred ccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE--eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCe
Q 014755 91 AGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH--VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWE 168 (419)
Q Consensus 91 ~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~ 168 (419)
..|.+++|. +..+.+++.++ .|..+|++..+... +..|...|..+.|++|+.++|+|+.| +.+.|||....+
T Consensus 261 ~rvg~laW~--~~~lssGsr~~-~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnD---N~~~Iwd~~~~~ 334 (484)
T KOG0305|consen 261 SRVGSLAWN--SSVLSSGSRDG-KILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGND---NVVFIWDGLSPE 334 (484)
T ss_pred ceeEEEecc--CceEEEecCCC-cEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCc---cceEeccCCCcc
Confidence 999999998 55677777777 99999999865443 67899999999999999999999987 799999998889
Q ss_pred EEEEEeccccceeeeeECCC-CCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEE--ecC
Q 014755 169 IMGVFAVDTLDLADIEWSPD-DSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGS--YDQ 244 (419)
Q Consensus 169 ~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~d~ 244 (419)
++..+..|...|.+++|+|- ...|++..++.|+.|++||. +|..+..+.... .|.++.|++..+-|+++. .++
T Consensus 335 p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgs---QVcsL~Wsk~~kEi~sthG~s~n 411 (484)
T KOG0305|consen 335 PKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTGS---QVCSLIWSKKYKELLSTHGYSEN 411 (484)
T ss_pred ccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccCC---ceeeEEEcCCCCEEEEecCCCCC
Confidence 99999999999999999995 55777877888999999999 888887776544 699999999987776653 467
Q ss_pred cEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCC
Q 014755 245 TLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQK 324 (419)
Q Consensus 245 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (419)
.|.||+..+.+.+..+
T Consensus 412 ~i~lw~~ps~~~~~~l---------------------------------------------------------------- 427 (484)
T KOG0305|consen 412 QITLWKYPSMKLVAEL---------------------------------------------------------------- 427 (484)
T ss_pred cEEEEeccccceeeee----------------------------------------------------------------
Confidence 8999998875554443
Q ss_pred CCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCC
Q 014755 325 PPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQ 367 (419)
Q Consensus 325 ~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~ 367 (419)
.+|...|..+++||||..+++|+.| .++++|++-..
T Consensus 428 -----~gH~~RVl~la~SPdg~~i~t~a~D--ETlrfw~~f~~ 463 (484)
T KOG0305|consen 428 -----LGHTSRVLYLALSPDGETIVTGAAD--ETLRFWNLFDE 463 (484)
T ss_pred -----cCCcceeEEEEECCCCCEEEEeccc--CcEEeccccCC
Confidence 3688889999999999999999999 99999998764
No 67
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=1.7e-32 Score=246.99 Aligned_cols=286 Identities=16% Similarity=0.258 Sum_probs=233.1
Q ss_pred cCcceeEEEEecCCCeEEEEe--ccCCeEEEEEccC------------CcceeeeecCCccEeEEEECCCCCEEEEEecC
Q 014755 46 CLDKISYIEWALDSEYILCGL--YKRLMIQAWSLTQ------------PEWTCKIDEGLAGIAYARWSPDSRHILTTSDF 111 (419)
Q Consensus 46 ~~~~v~~~~~s~~~~~l~~~~--~~~g~i~iw~~~~------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 111 (419)
+...|.++..+|||..+++|+ .| |.++||+.+. .+.+.++..|.+.|.|+.|+|||++||+|++|
T Consensus 12 ~~~~IfSIdv~pdg~~~aTgGq~~d-~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD 90 (942)
T KOG0973|consen 12 NEKSIFSIDVHPDGVKFATGGQVLD-GGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDD 90 (942)
T ss_pred CCeeEEEEEecCCceeEecCCcccc-ccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCc
Confidence 456799999999999999998 66 6788998752 23456677899999999999999999999999
Q ss_pred CCeEEEEEcCC-------C-----------eEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEE
Q 014755 112 QLRLTVWSLLN-------T-----------ACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGV 172 (419)
Q Consensus 112 ~~~i~iwd~~~-------~-----------~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~ 172 (419)
. .|.+|.... + +... +.+|...|..++|+|++.++++++.| ++|.+|+.++.+.+..
T Consensus 91 ~-~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~D---nsViiwn~~tF~~~~v 166 (942)
T KOG0973|consen 91 R-LVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLD---NSVIIWNAKTFELLKV 166 (942)
T ss_pred c-eEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEeccc---ceEEEEccccceeeee
Confidence 8 999999872 1 1223 78899999999999999999999998 8999999999999999
Q ss_pred EeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCC----CCceeEEEEccCCCeEEEEEe----c
Q 014755 173 FAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYES----GLGVKSISWSPCGQFLAVGSY----D 243 (419)
Q Consensus 173 ~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~----~~~v~~~~~s~~~~~l~~~~~----d 243 (419)
+.+|...|..+.|.|-|+++++ .+.|++|++|+. +-...+.+..+-. ......+.|||||++|++... -
T Consensus 167 l~~H~s~VKGvs~DP~Gky~AS--qsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~ 244 (942)
T KOG0973|consen 167 LRGHQSLVKGVSWDPIGKYFAS--QSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGK 244 (942)
T ss_pred eecccccccceEECCccCeeee--ecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCc
Confidence 9999999999999999999999 778999999997 6556666554322 235789999999999998742 2
Q ss_pred CcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCC
Q 014755 244 QTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQ 323 (419)
Q Consensus 244 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (419)
.++.|.+-.+++.-..
T Consensus 245 ~~~~IieR~tWk~~~~---------------------------------------------------------------- 260 (942)
T KOG0973|consen 245 STIAIIERGTWKVDKD---------------------------------------------------------------- 260 (942)
T ss_pred ceeEEEecCCceeeee----------------------------------------------------------------
Confidence 3566666555443333
Q ss_pred CCCCCCCCCCcceEEEEEccC-----C------------eEEEEecCCCCceEEEeeccCCCceeecc--cCCCeeEEEe
Q 014755 324 KPPTDKPNPKQGIGLMSWSSD-----S------------QYICTRNDSMPTTLWIWDICRQEPAAILV--QKDPIRAATW 384 (419)
Q Consensus 324 ~~~~~~~~~~~~v~~~~~s~~-----g------------~~l~~~~~d~~~~i~iwd~~~~~~~~~~~--~~~~v~~~~~ 384 (419)
+.+|..++.+++|+|. . ..+|+|+.| ++|.||.....+++.... ....|.+++|
T Consensus 261 -----LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqD--rSlSVW~T~~~RPl~vi~~lf~~SI~DmsW 333 (942)
T KOG0973|consen 261 -----LVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQD--RSLSVWNTALPRPLFVIHNLFNKSIVDMSW 333 (942)
T ss_pred -----eecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCC--ccEEEEecCCCCchhhhhhhhcCceeeeeE
Confidence 3357777777888762 1 167888998 999999997777665553 5678999999
Q ss_pred CCCCCeEEEEeCCCcEEEeecCCCe
Q 014755 385 DPTCTRLVLCTGSSHLYMWTPSGAY 409 (419)
Q Consensus 385 s~~~~~l~s~~~dg~i~vw~~~~~~ 409 (419)
+|||..|..+|.||+|.+..++..+
T Consensus 334 spdG~~LfacS~DGtV~~i~Fee~E 358 (942)
T KOG0973|consen 334 SPDGFSLFACSLDGTVALIHFEEKE 358 (942)
T ss_pred cCCCCeEEEEecCCeEEEEEcchHH
Confidence 9999999999999999999998544
No 68
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.8e-32 Score=230.15 Aligned_cols=275 Identities=15% Similarity=0.272 Sum_probs=230.9
Q ss_pred eEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-ec
Q 014755 51 SYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQ 129 (419)
Q Consensus 51 ~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~ 129 (419)
.-+.|+ ..+.||++.. ..|++|+..+++.......+...|+++.|+++|.+|+++..++ .|.|||....+... +.
T Consensus 181 nlldWs-s~n~laValg--~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g-~v~iwD~~~~k~~~~~~ 256 (484)
T KOG0305|consen 181 NLLDWS-SANVLAVALG--QSVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDG-TVQIWDVKEQKKTRTLR 256 (484)
T ss_pred hHhhcc-cCCeEEEEec--ceEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecCC-eEEEEehhhcccccccc
Confidence 346788 4557787764 3799999999886555555578899999999999999999887 99999999877766 66
Q ss_pred c-CCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEE-EeccccceeeeeECCCCCeEEEEcCCCCceEEEEc
Q 014755 130 S-PKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGV-FAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYS 207 (419)
Q Consensus 130 ~-~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d 207 (419)
. |...|.+++|. +..+.+|+.+ +.|..+|++..+.... +.+|...|..+.|++|+.+++. +..|+.+.+||
T Consensus 257 ~~h~~rvg~laW~--~~~lssGsr~---~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lAS--GgnDN~~~Iwd 329 (484)
T KOG0305|consen 257 GSHASRVGSLAWN--SSVLSSGSRD---GKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLAS--GGNDNVVFIWD 329 (484)
T ss_pred CCcCceeEEEecc--CceEEEecCC---CcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeecc--CCCccceEecc
Confidence 6 88899999998 5677888776 8999999998766555 8889999999999999999998 88899999999
Q ss_pred C-CCceEEEEeecCCCCceeEEEEccC-CCeEEEEE--ecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCccc
Q 014755 208 P-DGRCLLKYQAYESGLGVKSISWSPC-GQFLAVGS--YDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQ 283 (419)
Q Consensus 208 ~-~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (419)
. ..+++..+..|.. .|..++|+|- ...||+|+ .|+.|++||..+++.+..+.
T Consensus 330 ~~~~~p~~~~~~H~a--AVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vd---------------------- 385 (484)
T KOG0305|consen 330 GLSPEPKFTFTEHTA--AVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVD---------------------- 385 (484)
T ss_pred CCCccccEEEeccce--eeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccc----------------------
Confidence 9 6677777777666 8999999994 46888875 58999999999998877764
Q ss_pred ccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEee
Q 014755 284 LDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWD 363 (419)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd 363 (419)
-...|..+.|++..+-|+++....++.|.||+
T Consensus 386 ------------------------------------------------tgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~ 417 (484)
T KOG0305|consen 386 ------------------------------------------------TGSQVCSLIWSKKYKELLSTHGYSENQITLWK 417 (484)
T ss_pred ------------------------------------------------cCCceeeEEEcCCCCEEEEecCCCCCcEEEEe
Confidence 23348999999998777776544448999999
Q ss_pred ccCCCceeec-ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCC
Q 014755 364 ICRQEPAAIL-VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGA 408 (419)
Q Consensus 364 ~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~ 408 (419)
..+.+++..+ +|...|..+++||||..+++|+.|.++++|++-+.
T Consensus 418 ~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 418 YPSMKLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLFDE 463 (484)
T ss_pred ccccceeeeecCCcceeEEEEECCCCCEEEEecccCcEEeccccCC
Confidence 9997776555 69999999999999999999999999999999753
No 69
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=100.00 E-value=1.1e-31 Score=231.33 Aligned_cols=320 Identities=13% Similarity=0.196 Sum_probs=250.3
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCC----CcEEEEeecCcceeEEEEecC-----------CCeEEEEeccCCeEEEEE
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHS----FKVVQLFSCLDKISYIEWALD-----------SEYILCGLYKRLMIQAWS 76 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~----~~~~~~~~~~~~v~~~~~s~~-----------~~~l~~~~~~~g~i~iw~ 76 (419)
+.|+|....|.+.. |..++|||+.. +++...+-|...|+.+.--|- ...+.+++.| ++|++|+
T Consensus 330 ~~Fdet~~klscVYndhSlYvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD-~TIRlW~ 408 (1080)
T KOG1408|consen 330 CQFDETTDKLSCVYNDHSLYVWDVRDVNKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSD-GTIRLWD 408 (1080)
T ss_pred EEecCCCceEEEEEcCceEEEEeccccccccceeeeeeccceeeeeccccccccCcccccCCccceeEecCC-CcEEEee
Confidence 67998888888776 88899999975 455556678888888876551 1246677766 7999999
Q ss_pred ccCCc---ceee-e---------------------------------ecCCccEeEEEECCCCCEEEEEecCCCeEEEEE
Q 014755 77 LTQPE---WTCK-I---------------------------------DEGLAGIAYARWSPDSRHILTTSDFQLRLTVWS 119 (419)
Q Consensus 77 ~~~~~---~~~~-~---------------------------------~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd 119 (419)
++.+. ..++ + -.....+.+++.+|+|++|+++...+ .+++|+
T Consensus 409 l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~G-nlrVy~ 487 (1080)
T KOG1408|consen 409 LAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGG-NLRVYD 487 (1080)
T ss_pred cccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccC-ceEEEE
Confidence 97531 1000 0 01234689999999999999998766 999999
Q ss_pred cCCCeEEE-eccCCCCeeeEEEccC---CCEEEEEeecCCCCeEEEEeccC-CeEEEEEeccccceeeeeECCCC--CeE
Q 014755 120 LLNTACVH-VQSPKHASKGVAFTQD---GKFAAICTRRDCKDYINLLSCHT-WEIMGVFAVDTLDLADIEWSPDD--SAI 192 (419)
Q Consensus 120 ~~~~~~~~-~~~~~~~~~~~~~~~~---~~~l~~~~~~~~~g~v~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~--~~l 192 (419)
+..-+... +..|...|.|+.++.. .++|++++.| ..|.+||... ..+++.+.+|...|+++.|..+| ..+
T Consensus 488 Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrd---RlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~M 564 (1080)
T KOG1408|consen 488 LQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRD---RLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKM 564 (1080)
T ss_pred ehhhhhhhheecccceeEEEeecCchhhhHhhhhccCC---ceEEEEecccccchhhhhcccccceeEEEEeecCCceEE
Confidence 99866655 8889999999999864 3789999987 7999999864 56778899999999999999888 444
Q ss_pred EEEcCCCCceEEEEcC----CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccC
Q 014755 193 VIWDSPLEYKVLIYSP----DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRG 268 (419)
Q Consensus 193 ~~~~~~~~~~i~~~d~----~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~ 268 (419)
+. ++.|..|++-.. +|.....-........++.|+..|..+++++++.|..|+|||+++++..+.|+...
T Consensus 565 is--cGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~---- 638 (1080)
T KOG1408|consen 565 IS--CGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSR---- 638 (1080)
T ss_pred Ee--ccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccc----
Confidence 44 566665544332 23222211111122368999999999999999999999999999999999886221
Q ss_pred CCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEE
Q 014755 269 PCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYI 348 (419)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l 348 (419)
+|.+..-.+...|.|.|+
T Consensus 639 --------------------------------------------------------------~~eG~lIKv~lDPSgiY~ 656 (1080)
T KOG1408|consen 639 --------------------------------------------------------------DHEGDLIKVILDPSGIYL 656 (1080)
T ss_pred --------------------------------------------------------------cCCCceEEEEECCCccEE
Confidence 255556778899999999
Q ss_pred EEecCCCCceEEEeeccCCCceeec-ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCC
Q 014755 349 CTRNDSMPTTLWIWDICRQEPAAIL-VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSG 407 (419)
Q Consensus 349 ~~~~~d~~~~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 407 (419)
|+...| .++.++|..+++++..+ ||...|+.+.|.+|.+.|++++.||+|.||.+..
T Consensus 657 atScsd--ktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~lp~ 714 (1080)
T KOG1408|consen 657 ATSCSD--KTLCFVDFVSGECVAQMTGHSEAVTGVKFLNDCKHLISVSGDGCIFVWKLPL 714 (1080)
T ss_pred EEeecC--CceEEEEeccchhhhhhcCcchheeeeeecccchhheeecCCceEEEEECch
Confidence 999999 99999999999988655 7999999999999999999999999999999874
No 70
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-31 Score=204.07 Aligned_cols=297 Identities=12% Similarity=0.132 Sum_probs=236.4
Q ss_pred CchhhhcccccC---eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEe-ecCcceeEEEEecCCCeEEEEeccCCeEEEE
Q 014755 1 MEFTEAYKQTGP---SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLF-SCLDKISYIEWALDSEYILCGLYKRLMIQAW 75 (419)
Q Consensus 1 m~~~~~~~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw 75 (419)
|...-+.||..+ +.++.+|.+|.+++ |....+|-..+|+.+-.+ +|.+.|+|+....+.+.+++|+.| .++++|
T Consensus 1 mrpi~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD-~t~kLW 79 (327)
T KOG0643|consen 1 MRPILLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSAD-QTAKLW 79 (327)
T ss_pred CCccccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeecccc-ceeEEE
Confidence 445566788877 88999999999999 778999988788877655 599999999999999999999988 699999
Q ss_pred EccCCcceeeeecCCccEeEEEECCCCCEEEEEecC----CCeEEEEEcC-------CCeEEE-eccCCCCeeeEEEccC
Q 014755 76 SLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDF----QLRLTVWSLL-------NTACVH-VQSPKHASKGVAFTQD 143 (419)
Q Consensus 76 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----~~~i~iwd~~-------~~~~~~-~~~~~~~~~~~~~~~~ 143 (419)
|+++|+++..+. ...+|..+.|+++|++++.+.++ .+.|.++|++ ..++.. +..+...++.+-|.|-
T Consensus 80 Dv~tGk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l 158 (327)
T KOG0643|consen 80 DVETGKQLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPL 158 (327)
T ss_pred EcCCCcEEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeeccc
Confidence 999999987774 56789999999999998887542 2379999998 345444 7778889999999999
Q ss_pred CCEEEEEeecCCCCeEEEEeccCC-eEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCC
Q 014755 144 GKFAAICTRRDCKDYINLLSCHTW-EIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYES 221 (419)
Q Consensus 144 ~~~l~~~~~~~~~g~v~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~ 221 (419)
+++|++|..+ |.|..||++++ +.+...+.|...|+.+.++||..+++. ++.|.+-++||. +-+.++++....
T Consensus 159 ~~~ii~Ghe~---G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT--~s~Dttakl~D~~tl~v~Kty~te~- 232 (327)
T KOG0643|consen 159 GETIIAGHED---GSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFIT--GSKDTTAKLVDVRTLEVLKTYTTER- 232 (327)
T ss_pred CCEEEEecCC---CcEEEEEcccCceeeechhhhccccccccccCCcceEEe--cccCccceeeeccceeeEEEeeecc-
Confidence 9999999887 89999999997 556666889999999999999999998 888999999999 778888887654
Q ss_pred CCceeEEEEccCCCeEEEEEecCc--EEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCcccccc
Q 014755 222 GLGVKSISWSPCGQFLAVGSYDQT--LRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGN 299 (419)
Q Consensus 222 ~~~v~~~~~s~~~~~l~~~~~d~~--i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (419)
+|++.+++|....++.|+.... |.-=..+.|+.-..|-|. .|.+
T Consensus 233 --PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~----------i~eE---------------------- 278 (327)
T KOG0643|consen 233 --PVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHL----------IFEE---------------------- 278 (327)
T ss_pred --cccceecccccceEEecCCceeeeeeeecccccchhhhHHHH----------HHHH----------------------
Confidence 7999999998888777764322 222222223222222110 0100
Q ss_pred ccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccC
Q 014755 300 SDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICR 366 (419)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~ 366 (419)
..-...+|-++|++++|+|+|+..++|++| |.|++...+.
T Consensus 279 -------------------------EigrvkGHFGPINsvAfhPdGksYsSGGED--G~VR~h~Fd~ 318 (327)
T KOG0643|consen 279 -------------------------EIGRVKGHFGPINSVAFHPDGKSYSSGGED--GYVRLHHFDS 318 (327)
T ss_pred -------------------------HhccccccccCcceeEECCCCcccccCCCC--ceEEEEEecc
Confidence 001134799999999999999999999999 9999986554
No 71
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=100.00 E-value=4.9e-33 Score=224.41 Aligned_cols=280 Identities=16% Similarity=0.244 Sum_probs=234.3
Q ss_pred ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCc--ceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC
Q 014755 45 SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPE--WTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN 122 (419)
Q Consensus 45 ~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~ 122 (419)
.|.+.+..+.|-++...|++++.| ..|++|+....+ .+..+.+..++|+.+.|.++++++++++.|+ .+++|++..
T Consensus 173 ~h~gev~~v~~l~~sdtlatgg~D-r~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~-~~r~Wnvd~ 250 (459)
T KOG0288|consen 173 AHEGEVHDVEFLRNSDTLATGGSD-RIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDK-NLRLWNVDS 250 (459)
T ss_pred ccccccceeEEccCcchhhhcchh-hhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCC-ceeeeeccc
Confidence 488999999999999999999998 599999997765 5666777788999999999999999999998 999999999
Q ss_pred CeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCc
Q 014755 123 TACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEY 201 (419)
Q Consensus 123 ~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~ 201 (419)
.+... +.+|...|+++.|......+++++.| .+|++||+....+.+.+... ..+..+..+ ...+ .++..|+
T Consensus 251 ~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~D---RtiK~WDl~k~~C~kt~l~~-S~cnDI~~~--~~~~--~SgH~Dk 322 (459)
T KOG0288|consen 251 LRLRHTLSGHTDKVTAAKFKLSHSRVVSGSAD---RTIKLWDLQKAYCSKTVLPG-SQCNDIVCS--ISDV--ISGHFDK 322 (459)
T ss_pred hhhhhhhcccccceeeehhhccccceeecccc---chhhhhhhhhhheecccccc-ccccceEec--ceee--eeccccc
Confidence 88777 89999999999998887778888887 89999999987777665442 344455544 2223 3378899
Q ss_pred eEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCC
Q 014755 202 KVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDE 280 (419)
Q Consensus 202 ~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (419)
+|++||. .+.+......+. .|+++..+++|..|.+++.|.++.+.|+++.+....+..+..-
T Consensus 323 kvRfwD~Rs~~~~~sv~~gg---~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k-------------- 385 (459)
T KOG0288|consen 323 KVRFWDIRSADKTRSVPLGG---RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFK-------------- 385 (459)
T ss_pred ceEEEeccCCceeeEeecCc---ceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccc--------------
Confidence 9999998 777777776655 6999999999999999999999999999988877766522111
Q ss_pred cccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEE
Q 014755 281 PLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLW 360 (419)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~ 360 (419)
.....+.+.|||++.|+|+|+.| |.|+
T Consensus 386 ---------------------------------------------------~asDwtrvvfSpd~~YvaAGS~d--gsv~ 412 (459)
T KOG0288|consen 386 ---------------------------------------------------CASDWTRVVFSPDGSYVAAGSAD--GSVY 412 (459)
T ss_pred ---------------------------------------------------cccccceeEECCCCceeeeccCC--CcEE
Confidence 01126789999999999999999 9999
Q ss_pred EeeccCCCceeecc--cCC-CeeEEEeCCCCCeEEEEeCCCcEEEee
Q 014755 361 IWDICRQEPAAILV--QKD-PIRAATWDPTCTRLVLCTGSSHLYMWT 404 (419)
Q Consensus 361 iwd~~~~~~~~~~~--~~~-~v~~~~~s~~~~~l~s~~~dg~i~vw~ 404 (419)
||++.++++...+. +.. .|++++|+|.|..|++++.++.+.+|.
T Consensus 413 iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 413 IWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred EEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence 99999999887773 444 799999999999999999999999994
No 72
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=1.1e-32 Score=218.93 Aligned_cols=284 Identities=11% Similarity=0.172 Sum_probs=237.0
Q ss_pred EeecCcceeEEEEecCC-CeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcC
Q 014755 43 LFSCLDKISYIEWALDS-EYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLL 121 (419)
Q Consensus 43 ~~~~~~~v~~~~~s~~~-~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~ 121 (419)
+.+|.+.|.+++=+|.. ..+++|+.| |.|+|||+.+.++...+..|.+.|..+++.. ..+++++.|. +|+.|.++
T Consensus 62 L~gHrdGV~~lakhp~~ls~~aSGs~D-G~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDK-tvK~wk~~ 137 (433)
T KOG0268|consen 62 LDGHRDGVSCLAKHPNKLSTVASGSCD-GEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDK-TVKQWKID 137 (433)
T ss_pred ccccccccchhhcCcchhhhhhccccC-ceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecCCc-ceeeeecc
Confidence 34699999999999987 778899887 9999999999999999999999999999987 6788999888 99999987
Q ss_pred CCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCc
Q 014755 122 NTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEY 201 (419)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~ 201 (419)
.. +.........+..+.-+..+..+++++. .|.|||.....++..+.-....+.++.|+|....++.. +.+|+
T Consensus 138 ~~-p~~tilg~s~~~gIdh~~~~~~FaTcGe-----~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas-~~sDr 210 (433)
T KOG0268|consen 138 GP-PLHTILGKSVYLGIDHHRKNSVFATCGE-----QIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILAS-CASDR 210 (433)
T ss_pred CC-cceeeeccccccccccccccccccccCc-----eeeecccccCCccceeecCCCceeEEecCCCcchheee-eccCC
Confidence 74 4443444556677887777888898875 69999999888999998888899999999988776653 56799
Q ss_pred eEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCC
Q 014755 202 KVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDE 280 (419)
Q Consensus 202 ~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (419)
.|.+||+ ++.+++.+.... .-+.++|+|.+-.++++++|..++.||++..+ ++
T Consensus 211 sIvLyD~R~~~Pl~KVi~~m---RTN~IswnPeafnF~~a~ED~nlY~~DmR~l~------~p----------------- 264 (433)
T KOG0268|consen 211 SIVLYDLRQASPLKKVILTM---RTNTICWNPEAFNFVAANEDHNLYTYDMRNLS------RP----------------- 264 (433)
T ss_pred ceEEEecccCCccceeeeec---cccceecCccccceeeccccccceehhhhhhc------cc-----------------
Confidence 9999999 888887776543 47789999988888999999999999976422 11
Q ss_pred cccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEE
Q 014755 281 PLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLW 360 (419)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~ 360 (419)
+....+|...|.++.|||.|+-+++|+.| .+|+
T Consensus 265 ---------------------------------------------~~v~~dhvsAV~dVdfsptG~EfvsgsyD--ksIR 297 (433)
T KOG0268|consen 265 ---------------------------------------------LNVHKDHVSAVMDVDFSPTGQEFVSGSYD--KSIR 297 (433)
T ss_pred ---------------------------------------------chhhcccceeEEEeccCCCcchhcccccc--ceEE
Confidence 11133688899999999999999999999 9999
Q ss_pred EeeccCCCceeec--ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeE
Q 014755 361 IWDICRQEPAAIL--VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYC 410 (419)
Q Consensus 361 iwd~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~ 410 (419)
||..+.+.-..++ ..-..|.|+.||.|.+++++||+|+.|++|...-.+.
T Consensus 298 If~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Asek 349 (433)
T KOG0268|consen 298 IFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKASEK 349 (433)
T ss_pred EeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecchhhh
Confidence 9999887765555 2446799999999999999999999999999875443
No 73
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=100.00 E-value=2.6e-29 Score=216.23 Aligned_cols=290 Identities=14% Similarity=0.155 Sum_probs=218.9
Q ss_pred CEEEEEe-CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEE
Q 014755 20 RYIAVAV-DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARW 98 (419)
Q Consensus 20 ~~la~~~-~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~ 98 (419)
+.+++++ ++.|.+||+.+++.+..+.+...+.+++|+|+++.+++++.+++.|++||..+++....+..+. .+..++|
T Consensus 2 ~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~ 80 (300)
T TIGR03866 2 KAYVSNEKDNTISVIDTATLEVTRTFPVGQRPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGP-DPELFAL 80 (300)
T ss_pred cEEEEecCCCEEEEEECCCCceEEEEECCCCCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCC-CccEEEE
Confidence 4667776 8899999999999888887666688999999999875544445799999999988776665443 3567899
Q ss_pred CCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEecccc
Q 014755 99 SPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTL 178 (419)
Q Consensus 99 ~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~ 178 (419)
+|+++.+++++.+++.+++||+++++.+........+.+++|+|++++++++..+ ...+.+||.++++....... ..
T Consensus 81 ~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~--~~~~~~~d~~~~~~~~~~~~-~~ 157 (300)
T TIGR03866 81 HPNGKILYIANEDDNLVTVIDIETRKVLAEIPVGVEPEGMAVSPDGKIVVNTSET--TNMAHFIDTKTYEIVDNVLV-DQ 157 (300)
T ss_pred CCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeCCCCcceEEECCCCCEEEEEecC--CCeEEEEeCCCCeEEEEEEc-CC
Confidence 9999988776554449999999988766633334456889999999999988764 23577889988877665443 23
Q ss_pred ceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecC-----CCCceeEEEEccCCCeEEEE-EecCcEEEEEc
Q 014755 179 DLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYE-----SGLGVKSISWSPCGQFLAVG-SYDQTLRVLNH 251 (419)
Q Consensus 179 ~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~~~-~~d~~i~v~d~ 251 (419)
....++|+|+++.+++. ...++.|++||+ +++.+..+..+. .......++|+|++++++++ +.++.+.+||+
T Consensus 158 ~~~~~~~s~dg~~l~~~-~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~ 236 (300)
T TIGR03866 158 RPRFAEFTADGKELWVS-SEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDA 236 (300)
T ss_pred CccEEEECCCCCEEEEE-cCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEEC
Confidence 45789999999988653 345789999999 676666554321 11124578899999986554 45668999999
Q ss_pred CCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCC
Q 014755 252 LTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPN 331 (419)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (419)
++++.+..+.
T Consensus 237 ~~~~~~~~~~---------------------------------------------------------------------- 246 (300)
T TIGR03866 237 KTYEVLDYLL---------------------------------------------------------------------- 246 (300)
T ss_pred CCCcEEEEEE----------------------------------------------------------------------
Confidence 8877654432
Q ss_pred CCcceEEEEEccCCeEEEEec-CCCCceEEEeeccCCCceeecccCCCeeEEEeCC
Q 014755 332 PKQGIGLMSWSSDSQYICTRN-DSMPTTLWIWDICRQEPAAILVQKDPIRAATWDP 386 (419)
Q Consensus 332 ~~~~v~~~~~s~~g~~l~~~~-~d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~ 386 (419)
+...+.+++|+|+|++|++++ .+ +.|.+||+.+++++..+......+.++++|
T Consensus 247 ~~~~~~~~~~~~~g~~l~~~~~~~--~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~ 300 (300)
T TIGR03866 247 VGQRVWQLAFTPDEKYLLTTNGVS--NDVSVIDVAALKVIKSIKVGRLPWGVVVRP 300 (300)
T ss_pred eCCCcceEEECCCCCEEEEEcCCC--CeEEEEECCCCcEEEEEEcccccceeEeCC
Confidence 112367899999999998874 46 999999999999888877667779998876
No 74
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=100.00 E-value=1.3e-30 Score=203.88 Aligned_cols=291 Identities=11% Similarity=0.112 Sum_probs=213.6
Q ss_pred eecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcc-----eeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEE
Q 014755 44 FSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEW-----TCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVW 118 (419)
Q Consensus 44 ~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iw 118 (419)
.+|.+.|++++|+.||++|++++.| ++|++|++++... ++.-. .-+..+.++|+||-+.+++....+..+++|
T Consensus 83 KgH~~~vt~~~FsSdGK~lat~~~D-r~Ir~w~~~DF~~~eHr~~R~nv-e~dhpT~V~FapDc~s~vv~~~~g~~l~vy 160 (420)
T KOG2096|consen 83 KGHKKEVTDVAFSSDGKKLATISGD-RSIRLWDVRDFENKEHRCIRQNV-EYDHPTRVVFAPDCKSVVVSVKRGNKLCVY 160 (420)
T ss_pred hccCCceeeeEEcCCCceeEEEeCC-ceEEEEecchhhhhhhhHhhccc-cCCCceEEEECCCcceEEEEEccCCEEEEE
Confidence 3589999999999999999999977 7999999986421 21111 123568899999998888877666699999
Q ss_pred EcCCCe---EEE----------eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeE
Q 014755 119 SLLNTA---CVH----------VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEW 185 (419)
Q Consensus 119 d~~~~~---~~~----------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~ 185 (419)
.+...+ ... -..|.-.+..+-...++.+|++++.| ..|.+|+++ |+.+..+......-+..+.
T Consensus 161 k~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~d---t~i~lw~lk-Gq~L~~idtnq~~n~~aav 236 (420)
T KOG2096|consen 161 KLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLD---TKICLWDLK-GQLLQSIDTNQSSNYDAAV 236 (420)
T ss_pred EeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCC---CcEEEEecC-Cceeeeeccccccccceee
Confidence 775321 111 11223344556667778999999987 689999999 8999988888778888999
Q ss_pred CCCCCeEEEEcCCCCceEEEEcC----CCc---eEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeee
Q 014755 186 SPDDSAIVIWDSPLEYKVLIYSP----DGR---CLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFA 258 (419)
Q Consensus 186 ~~~~~~l~~~~~~~~~~i~~~d~----~~~---~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~ 258 (419)
+|+|+++++ +...-.+++|.+ +|. ..+.++...|...|..++|+++.+.+++.+.||++++||+.-.-...
T Consensus 237 SP~GRFia~--~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~ 314 (420)
T KOG2096|consen 237 SPDGRFIAV--SGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAG 314 (420)
T ss_pred CCCCcEEEE--ecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecC
Confidence 999999998 555677899987 332 22333333444489999999999999999999999999975321110
Q ss_pred eecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEE
Q 014755 259 EFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGL 338 (419)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 338 (419)
+ .+..+. .++ ..+....+.-..
T Consensus 315 q--Dpk~Lk------~g~--------------------------------------------------~pl~aag~~p~R 336 (420)
T KOG2096|consen 315 Q--DPKILK------EGS--------------------------------------------------APLHAAGSEPVR 336 (420)
T ss_pred C--CchHhh------cCC--------------------------------------------------cchhhcCCCceE
Confidence 0 000000 000 001111222347
Q ss_pred EEEccCCeEEEEecCCCCceEEEeeccCCCceeecc--cCCCeeEEEeCCCCCeEEEEeCCCcEEEee
Q 014755 339 MSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV--QKDPIRAATWDPTCTRLVLCTGSSHLYMWT 404 (419)
Q Consensus 339 ~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~ 404 (419)
+++||.|+.||.... ..+++|..++++....+. |...|.+++|+++|+++++++ |..+++..
T Consensus 337 L~lsP~g~~lA~s~g---s~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcG-dr~vrv~~ 400 (420)
T KOG2096|consen 337 LELSPSGDSLAVSFG---SDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCG-DRYVRVIR 400 (420)
T ss_pred EEeCCCCcEEEeecC---CceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeec-ceeeeeec
Confidence 999999999999877 689999999998877764 999999999999999999887 56777765
No 75
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=5.3e-31 Score=217.21 Aligned_cols=273 Identities=14% Similarity=0.149 Sum_probs=226.2
Q ss_pred CeEEcCCC-CEEEEEeCCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecC
Q 014755 12 PSCFSPNA-RYIAVAVDYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEG 89 (419)
Q Consensus 12 ~~~~s~d~-~~la~~~~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~ 89 (419)
.++|||.. --+|+.+.-++.||+..+....+.+. ....|.++.|..||++||+|... |.|+|||+.+...++.+..|
T Consensus 31 sl~fsp~~P~d~aVt~S~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~s-G~V~vfD~k~r~iLR~~~ah 109 (487)
T KOG0310|consen 31 SLCFSPKHPYDFAVTSSVRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDES-GHVKVFDMKSRVILRQLYAH 109 (487)
T ss_pred eEecCCCCCCceEEecccEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCc-CcEEEeccccHHHHHHHhhc
Confidence 38999944 45777888889999999888887554 77889999999999999998855 99999997776677889999
Q ss_pred CccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCC-EEEEEeecCCCCeEEEEeccCC
Q 014755 90 LAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGK-FAAICTRRDCKDYINLLSCHTW 167 (419)
Q Consensus 90 ~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~g~v~i~d~~~~ 167 (419)
..++..+.|+|++..+++.+.|++.+++||+.+...+. +.+|...|.+.+|+|... .+++|+.| |.|++||++..
T Consensus 110 ~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYD---g~vrl~DtR~~ 186 (487)
T KOG0310|consen 110 QAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYD---GKVRLWDTRSL 186 (487)
T ss_pred cCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCC---ceEEEEEeccC
Confidence 99999999999777766666566699999999988754 899999999999999765 67778887 89999999987
Q ss_pred -eEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCce-EEEEeecCCCCceeEEEEccCCCeEEEEEecC
Q 014755 168 -EIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRC-LLKYQAYESGLGVKSISWSPCGQFLAVGSYDQ 244 (419)
Q Consensus 168 -~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~ 244 (419)
..+..+ .|..+|..+.+-|.|..+++ ...+.+++||+ .|.. +..+..|.. .|+|+.+..++..|++++-|+
T Consensus 187 ~~~v~el-nhg~pVe~vl~lpsgs~ias---AgGn~vkVWDl~~G~qll~~~~~H~K--tVTcL~l~s~~~rLlS~sLD~ 260 (487)
T KOG0310|consen 187 TSRVVEL-NHGCPVESVLALPSGSLIAS---AGGNSVKVWDLTTGGQLLTSMFNHNK--TVTCLRLASDSTRLLSGSLDR 260 (487)
T ss_pred CceeEEe-cCCCceeeEEEcCCCCEEEE---cCCCeEEEEEecCCceehhhhhcccc--eEEEEEeecCCceEeeccccc
Confidence 444444 46789999999999999997 33679999999 4544 333333444 899999999999999999999
Q ss_pred cEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCC
Q 014755 245 TLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQK 324 (419)
Q Consensus 245 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (419)
.+++||+.+.+.+..+..
T Consensus 261 ~VKVfd~t~~Kvv~s~~~-------------------------------------------------------------- 278 (487)
T KOG0310|consen 261 HVKVFDTTNYKVVHSWKY-------------------------------------------------------------- 278 (487)
T ss_pred ceEEEEccceEEEEeeec--------------------------------------------------------------
Confidence 999999988888777652
Q ss_pred CCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccC
Q 014755 325 PPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICR 366 (419)
Q Consensus 325 ~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~ 366 (419)
.++|.+++.+|+++.++.|..+ |.+.+-+...
T Consensus 279 --------~~pvLsiavs~dd~t~viGmsn--Glv~~rr~~~ 310 (487)
T KOG0310|consen 279 --------PGPVLSIAVSPDDQTVVIGMSN--GLVSIRRREV 310 (487)
T ss_pred --------ccceeeEEecCCCceEEEeccc--ceeeeehhhc
Confidence 3457899999999999999998 9888775443
No 76
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=1.1e-30 Score=235.56 Aligned_cols=279 Identities=17% Similarity=0.247 Sum_probs=226.1
Q ss_pred eEEcCCCCEEEEEe---CCeEEEEecCCC------------c-EEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEE
Q 014755 13 SCFSPNARYIAVAV---DYRLVVRDAHSF------------K-VVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWS 76 (419)
Q Consensus 13 ~~~s~d~~~la~~~---~~~i~i~~~~~~------------~-~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~ 76 (419)
+..+|||..+|+|+ |+.++||+.+.- + +-....|.+.|.|+.|+|||++||+|+.| ..|.||+
T Consensus 19 Idv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD-~~v~iW~ 97 (942)
T KOG0973|consen 19 IDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDD-RLVMIWE 97 (942)
T ss_pred EEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCc-ceEEEee
Confidence 78999999999997 677889986521 1 11233589999999999999999999965 7999999
Q ss_pred ccC----------C--------cceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeee
Q 014755 77 LTQ----------P--------EWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKG 137 (419)
Q Consensus 77 ~~~----------~--------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~ 137 (419)
... | +....+.+|...|..++|+|++.++++++.|+ +|.+|+..+.+... +.+|...|..
T Consensus 98 ~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~Dn-sViiwn~~tF~~~~vl~~H~s~VKG 176 (942)
T KOG0973|consen 98 RAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDN-SVIIWNAKTFELLKVLRGHQSLVKG 176 (942)
T ss_pred ecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccc-eEEEEccccceeeeeeecccccccc
Confidence 873 0 24567889999999999999999999999998 99999999987777 8999999999
Q ss_pred EEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccc------cceeeeeECCCCCeEEEEcCCCC--ceEEEEcC-
Q 014755 138 VAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDT------LDLADIEWSPDDSAIVIWDSPLE--YKVLIYSP- 208 (419)
Q Consensus 138 ~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~------~~v~~~~~~~~~~~l~~~~~~~~--~~i~~~d~- 208 (419)
+.|.|-|++||+-+.| ++|++|+..++...+.+..+- .....+.|+|||.+|++..+-.. ..+.+.+.
T Consensus 177 vs~DP~Gky~ASqsdD---rtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~ 253 (942)
T KOG0973|consen 177 VSWDPIGKYFASQSDD---RTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERG 253 (942)
T ss_pred eEECCccCeeeeecCC---ceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecC
Confidence 9999999999999987 899999988887777766543 34788999999999997543322 46777777
Q ss_pred CCceEEEEeecCCCCceeEEEEccC-----CC------------eEEEEEecCcEEEEEcCCceeeeeecccccccCCCc
Q 014755 209 DGRCLLKYQAYESGLGVKSISWSPC-----GQ------------FLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCF 271 (419)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~~~~s~~-----~~------------~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~ 271 (419)
+-+.-..+-+|.. ++.+++|+|. .+ .+|+|+.|++|.||.....+++....+-
T Consensus 254 tWk~~~~LvGH~~--p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~l-------- 323 (942)
T KOG0973|consen 254 TWKVDKDLVGHSA--PVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNL-------- 323 (942)
T ss_pred CceeeeeeecCCC--ceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhh--------
Confidence 4444556666665 8999999982 11 5788999999999998776665544311
Q ss_pred cceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEe
Q 014755 272 PAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTR 351 (419)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 351 (419)
-...|.+++|+|||..|+++
T Consensus 324 ------------------------------------------------------------f~~SI~DmsWspdG~~Lfac 343 (942)
T KOG0973|consen 324 ------------------------------------------------------------FNKSIVDMSWSPDGFSLFAC 343 (942)
T ss_pred ------------------------------------------------------------hcCceeeeeEcCCCCeEEEE
Confidence 12348999999999999999
Q ss_pred cCCCCceEEEeeccCCC
Q 014755 352 NDSMPTTLWIWDICRQE 368 (419)
Q Consensus 352 ~~d~~~~i~iwd~~~~~ 368 (419)
+.| |+|.++..+..+
T Consensus 344 S~D--GtV~~i~Fee~E 358 (942)
T KOG0973|consen 344 SLD--GTVALIHFEEKE 358 (942)
T ss_pred ecC--CeEEEEEcchHH
Confidence 999 999999987643
No 77
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=100.00 E-value=7.3e-32 Score=217.68 Aligned_cols=277 Identities=12% Similarity=0.194 Sum_probs=230.3
Q ss_pred ccccCeEEcCCCCEEEEEe-CCeEEEEecCCCc--EEEE-eecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcce
Q 014755 8 KQTGPSCFSPNARYIAVAV-DYRLVVRDAHSFK--VVQL-FSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWT 83 (419)
Q Consensus 8 ~~~~~~~~s~d~~~la~~~-~~~i~i~~~~~~~--~~~~-~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~ 83 (419)
+....+.|-++...|++++ |..|++|+....+ .... .+..++|+++.|.++++++++++.| +.+++|++...+..
T Consensus 176 gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d-~~~r~Wnvd~~r~~ 254 (459)
T KOG0288|consen 176 GEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASND-KNLRLWNVDSLRLR 254 (459)
T ss_pred cccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCC-Cceeeeeccchhhh
Confidence 3344488999988999997 8889999988776 3333 3456889999999999999999977 79999999999999
Q ss_pred eeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEe
Q 014755 84 CKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLS 163 (419)
Q Consensus 84 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d 163 (419)
.++.+|.+.|+++.|......+++++.|. +|++||+....+.+.......+..+..+ ...++++..| ++|++||
T Consensus 255 ~TLsGHtdkVt~ak~~~~~~~vVsgs~DR-tiK~WDl~k~~C~kt~l~~S~cnDI~~~--~~~~~SgH~D---kkvRfwD 328 (459)
T KOG0288|consen 255 HTLSGHTDKVTAAKFKLSHSRVVSGSADR-TIKLWDLQKAYCSKTVLPGSQCNDIVCS--ISDVISGHFD---KKVRFWD 328 (459)
T ss_pred hhhcccccceeeehhhccccceeeccccc-hhhhhhhhhhheeccccccccccceEec--ceeeeecccc---cceEEEe
Confidence 99999999999999998877799999988 9999999998888855566666677765 4456666665 7899999
Q ss_pred ccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCC--CCceeEEEEccCCCeEEEE
Q 014755 164 CHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYES--GLGVKSISWSPCGQFLAVG 240 (419)
Q Consensus 164 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~ 240 (419)
.++.........+. .|+++..++++..+.+ .+.|..+.++|+ +.+..+.+..... ....+.+.|||++.|+++|
T Consensus 329 ~Rs~~~~~sv~~gg-~vtSl~ls~~g~~lLs--ssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAG 405 (459)
T KOG0288|consen 329 IRSADKTRSVPLGG-RVTSLDLSMDGLELLS--SSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAG 405 (459)
T ss_pred ccCCceeeEeecCc-ceeeEeeccCCeEEee--ecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeec
Confidence 99999998888764 8999999999999988 577999999999 5555555554321 1357889999999999999
Q ss_pred EecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCC
Q 014755 241 SYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISL 320 (419)
Q Consensus 241 ~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (419)
+.||.|+||++.++++...+..+.
T Consensus 406 S~dgsv~iW~v~tgKlE~~l~~s~-------------------------------------------------------- 429 (459)
T KOG0288|consen 406 SADGSVYIWSVFTGKLEKVLSLST-------------------------------------------------------- 429 (459)
T ss_pred cCCCcEEEEEccCceEEEEeccCC--------------------------------------------------------
Confidence 999999999999999887765110
Q ss_pred CCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEee
Q 014755 321 PFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWD 363 (419)
Q Consensus 321 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd 363 (419)
....|++++|+|.|..|++++.+ +.+.+|.
T Consensus 430 -----------s~~aI~s~~W~~sG~~Llsadk~--~~v~lW~ 459 (459)
T KOG0288|consen 430 -----------SNAAITSLSWNPSGSGLLSADKQ--KAVTLWT 459 (459)
T ss_pred -----------CCcceEEEEEcCCCchhhcccCC--cceEecC
Confidence 11258999999999999999998 9999983
No 78
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.6e-30 Score=197.00 Aligned_cols=277 Identities=14% Similarity=0.224 Sum_probs=213.6
Q ss_pred eEEEEec--CCCeEEEEec-----cCCeEEEEEccCCcceeeee--cCCccEeEEEECCCC-CEEEEEecCCCeEEEEEc
Q 014755 51 SYIEWAL--DSEYILCGLY-----KRLMIQAWSLTQPEWTCKID--EGLAGIAYARWSPDS-RHILTTSDFQLRLTVWSL 120 (419)
Q Consensus 51 ~~~~~s~--~~~~l~~~~~-----~~g~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~-~~l~~~~~~~~~i~iwd~ 120 (419)
.++.||| ++++.++++. ..|++.|.++..++-+..+. .-.+.+..++|+++. ..+++++.|+ .+++||+
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDG-SLrl~d~ 90 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDG-SLRLFDL 90 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCc-eEEEecc
Confidence 5788999 3433332211 13799999997554444432 345678999999965 4466667777 9999997
Q ss_pred CC-CeEEE-eccCCCCeeeEEEccCC-CEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcC
Q 014755 121 LN-TACVH-VQSPKHASKGVAFTQDG-KFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDS 197 (419)
Q Consensus 121 ~~-~~~~~-~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 197 (419)
.. ..++. ++.|+.+|.++.|++.. +.+++++.| ++|++|+...++.+.++.+|...|...+|+|.-.-++.. .
T Consensus 91 ~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD---~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas-~ 166 (311)
T KOG0277|consen 91 TMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWD---GTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFAS-A 166 (311)
T ss_pred CCCCcchhHHHhhhhheEEeccccccceeEEeeccC---CceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEE-c
Confidence 64 33444 88999999999999865 556666776 899999999999999999999999999999975544432 6
Q ss_pred CCCceEEEEcC--CCceEEEEeecCCCCceeEEEEcc-CCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccce
Q 014755 198 PLEYKVLIYSP--DGRCLLKYQAYESGLGVKSISWSP-CGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAV 274 (419)
Q Consensus 198 ~~~~~i~~~d~--~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 274 (419)
+.|+.+++||+ .|+.+. +..|.. .+.++.|+. +...+++|+.|+.|+.||++..+.
T Consensus 167 Sgd~~l~lwdvr~~gk~~~-i~ah~~--Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~------------------ 225 (311)
T KOG0277|consen 167 SGDGTLRLWDVRSPGKFMS-IEAHNS--EILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRT------------------ 225 (311)
T ss_pred cCCceEEEEEecCCCceeE-EEeccc--eeEeecccccCCcEEEecCCCceEEEEehhhccc------------------
Confidence 77999999999 666655 777764 799999998 456889999999999999876331
Q ss_pred eccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccC-CeEEEEecC
Q 014755 275 FKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSD-SQYICTRND 353 (419)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~~~~~ 353 (419)
|+..+.+|.-.|..++|||. ..+||+++.
T Consensus 226 --------------------------------------------------pl~eL~gh~~AVRkvk~Sph~~~lLaSasY 255 (311)
T KOG0277|consen 226 --------------------------------------------------PLFELNGHGLAVRKVKFSPHHASLLASASY 255 (311)
T ss_pred --------------------------------------------------cceeecCCceEEEEEecCcchhhHhhhccc
Confidence 11113368889999999996 468899999
Q ss_pred CCCceEEEeeccCCC-ceeecc-cCCCeeEEEeCCC-CCeEEEEeCCCcEEEeec
Q 014755 354 SMPTTLWIWDICRQE-PAAILV-QKDPIRAATWDPT-CTRLVLCTGSSHLYMWTP 405 (419)
Q Consensus 354 d~~~~i~iwd~~~~~-~~~~~~-~~~~v~~~~~s~~-~~~l~s~~~dg~i~vw~~ 405 (419)
| -+++|||...+. ++.... |..-+..+.||+- ..++|+++.|+.++||+.
T Consensus 256 D--mT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 256 D--MTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred c--ceEEecccccchhhhhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence 9 999999988544 444444 8889999999975 448999999999999985
No 79
>PTZ00421 coronin; Provisional
Probab=100.00 E-value=3.9e-29 Score=222.03 Aligned_cols=242 Identities=9% Similarity=0.126 Sum_probs=186.9
Q ss_pred EEcCCCCEEEEEe-CCeEEEEecCCCcEE--------------EEeecCcceeEEEEec-CCCeEEEEeccCCeEEEEEc
Q 014755 14 CFSPNARYIAVAV-DYRLVVRDAHSFKVV--------------QLFSCLDKISYIEWAL-DSEYILCGLYKRLMIQAWSL 77 (419)
Q Consensus 14 ~~s~d~~~la~~~-~~~i~i~~~~~~~~~--------------~~~~~~~~v~~~~~s~-~~~~l~~~~~~~g~i~iw~~ 77 (419)
..++|+..+++++ +.....|+...+..+ .+.+|.+.|.+++|+| ++++|++++.| ++|++||+
T Consensus 27 ~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~D-gtIkIWdi 105 (493)
T PTZ00421 27 TALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASED-GTIMGWGI 105 (493)
T ss_pred cccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCC-CEEEEEec
Confidence 4556655555554 333445654333211 2446899999999999 88899999976 89999999
Q ss_pred cCC-------cceeeeecCCccEeEEEECCCC-CEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEE
Q 014755 78 TQP-------EWTCKIDEGLAGIAYARWSPDS-RHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAA 148 (419)
Q Consensus 78 ~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~ 148 (419)
.++ +.+..+.+|...|.+++|+|++ ..|++++.|+ .|++||+++++... +..|...+.+++|+|++.+|+
T Consensus 106 ~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dg-tVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLa 184 (493)
T PTZ00421 106 PEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADM-VVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLC 184 (493)
T ss_pred CCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCC-EEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEE
Confidence 765 2456788899999999999986 6888888887 99999999988776 777888999999999999999
Q ss_pred EEeecCCCCeEEEEeccCCeEEEEEeccccc-eeeeeECCCCCeEEEEc--CCCCceEEEEcC-CC-ceEEEEeecCCCC
Q 014755 149 ICTRRDCKDYINLLSCHTWEIMGVFAVDTLD-LADIEWSPDDSAIVIWD--SPLEYKVLIYSP-DG-RCLLKYQAYESGL 223 (419)
Q Consensus 149 ~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~--~~~~~~i~~~d~-~~-~~~~~~~~~~~~~ 223 (419)
+++.| +.|++||+++++.+..+..|... ...+.|.+++..+++.. ...++.|++||+ +. ..+.....+ ...
T Consensus 185 tgs~D---g~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d-~~~ 260 (493)
T PTZ00421 185 TTSKD---KKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLD-QSS 260 (493)
T ss_pred EecCC---CEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccC-CCC
Confidence 99987 89999999999998888888754 45678899888777532 245799999999 33 333333322 222
Q ss_pred ceeEEEEccCCCeEEEEE-ecCcEEEEEcCCceeeeeec
Q 014755 224 GVKSISWSPCGQFLAVGS-YDQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 224 ~v~~~~~s~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~ 261 (419)
.+....|++++++|++++ .|+.|++||+.+++++....
T Consensus 261 ~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~ 299 (493)
T PTZ00421 261 ALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSS 299 (493)
T ss_pred ceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEee
Confidence 566678999999999887 49999999999888766543
No 80
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.98 E-value=3.3e-30 Score=212.54 Aligned_cols=281 Identities=11% Similarity=0.126 Sum_probs=233.2
Q ss_pred ecCcceeEEEEecCCCe-EEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCC
Q 014755 45 SCLDKISYIEWALDSEY-ILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNT 123 (419)
Q Consensus 45 ~~~~~v~~~~~s~~~~~-l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~ 123 (419)
...+.|.+++|+|...+ +|++++ -.+.||+..+......+......+.++.|..||+.+++|...| .|+++|+.+.
T Consensus 24 ke~~~vssl~fsp~~P~d~aVt~S--~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG-~V~vfD~k~r 100 (487)
T KOG0310|consen 24 KEHNSVSSLCFSPKHPYDFAVTSS--VRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESG-HVKVFDMKSR 100 (487)
T ss_pred cccCcceeEecCCCCCCceEEecc--cEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcC-cEEEeccccH
Confidence 34578999999995543 555554 4799999988877777777788899999999999888887776 9999997775
Q ss_pred eEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCce
Q 014755 124 ACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYK 202 (419)
Q Consensus 124 ~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~ 202 (419)
..++ +..|..++....|+|++..+++.+.| ++.+++||+.+......+.+|+..|++.+|+|....+++. ++.||.
T Consensus 101 ~iLR~~~ah~apv~~~~f~~~d~t~l~s~sD--d~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvt-GsYDg~ 177 (487)
T KOG0310|consen 101 VILRQLYAHQAPVHVTKFSPQDNTMLVSGSD--DKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVT-GSYDGK 177 (487)
T ss_pred HHHHHHhhccCceeEEEecccCCeEEEecCC--CceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEe-cCCCce
Confidence 5555 88999999999999988666665555 3799999999988766899999999999999988866653 778999
Q ss_pred EEEEcC--CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCcee-eeeecccccccCCCccceeccCC
Q 014755 203 VLIYSP--DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKT-FAEFMHLSTVRGPCFPAVFKEVD 279 (419)
Q Consensus 203 i~~~d~--~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 279 (419)
|++||. .+..+..+. +..+|..+.+-|.|..|++++.. .|+|||+.+|.. +..+
T Consensus 178 vrl~DtR~~~~~v~eln---hg~pVe~vl~lpsgs~iasAgGn-~vkVWDl~~G~qll~~~------------------- 234 (487)
T KOG0310|consen 178 VRLWDTRSLTSRVVELN---HGCPVESVLALPSGSLIASAGGN-SVKVWDLTTGGQLLTSM------------------- 234 (487)
T ss_pred EEEEEeccCCceeEEec---CCCceeeEEEcCCCCEEEEcCCC-eEEEEEecCCceehhhh-------------------
Confidence 999999 334555443 33489999999999999999864 899999986543 2222
Q ss_pred CcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceE
Q 014755 280 EPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTL 359 (419)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i 359 (419)
..|...|+|+++..++..|++++-| +.+
T Consensus 235 --------------------------------------------------~~H~KtVTcL~l~s~~~rLlS~sLD--~~V 262 (487)
T KOG0310|consen 235 --------------------------------------------------FNHNKTVTCLRLASDSTRLLSGSLD--RHV 262 (487)
T ss_pred --------------------------------------------------hcccceEEEEEeecCCceEeecccc--cce
Confidence 1377789999999999999999999 999
Q ss_pred EEeeccCCCceeecccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 360 WIWDICRQEPAAILVQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 360 ~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
++||+.+-+.+......++|.+++.+|+++.++.|-.||.+.+=+..
T Consensus 263 KVfd~t~~Kvv~s~~~~~pvLsiavs~dd~t~viGmsnGlv~~rr~~ 309 (487)
T KOG0310|consen 263 KVFDTTNYKVVHSWKYPGPVLSIAVSPDDQTVVIGMSNGLVSIRRRE 309 (487)
T ss_pred EEEEccceEEEEeeecccceeeEEecCCCceEEEecccceeeeehhh
Confidence 99999988999888999999999999999999999999988777554
No 81
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.98 E-value=2.5e-30 Score=214.64 Aligned_cols=290 Identities=15% Similarity=0.196 Sum_probs=220.5
Q ss_pred EEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCc----ceeeee-cCCccEeEEEECCCCCEEEEEecCCCe
Q 014755 40 VVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPE----WTCKID-EGLAGIAYARWSPDSRHILTTSDFQLR 114 (419)
Q Consensus 40 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~----~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~~ 114 (419)
.+++.+|+..|.++++.|.|..+++|+.| .+|++||+.... ..+.+. .....|.++.|++.|..|++.+... +
T Consensus 160 Ei~l~hgtk~Vsal~~Dp~GaR~~sGs~D-y~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~a-q 237 (641)
T KOG0772|consen 160 EIQLKHGTKIVSALAVDPSGARFVSGSLD-YTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSA-Q 237 (641)
T ss_pred eEeccCCceEEEEeeecCCCceeeecccc-ceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCc-c
Confidence 34455678899999999999999999998 799999997442 222232 2345699999999999998888776 8
Q ss_pred EEEEEcCCCeEEE-------------eccCCCCeeeEEEccCC-CEEEEEeecCCCCeEEEEeccCCeE-EEEEe-----
Q 014755 115 LTVWSLLNTACVH-------------VQSPKHASKGVAFTQDG-KFAAICTRRDCKDYINLLSCHTWEI-MGVFA----- 174 (419)
Q Consensus 115 i~iwd~~~~~~~~-------------~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~g~v~i~d~~~~~~-~~~~~----- 174 (419)
.+++|-..-+... ..+|...+++-+|+|+. ..+++++.| |++++||+...+. .+.+.
T Consensus 238 akl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~D---gtlRiWdv~~~k~q~qVik~k~~~ 314 (641)
T KOG0772|consen 238 AKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYD---GTLRIWDVNNTKSQLQVIKTKPAG 314 (641)
T ss_pred eeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCC---CcEEEEecCCchhheeEEeeccCC
Confidence 9999987644433 24566677999999987 567777776 8999999987432 22232
Q ss_pred ccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCC----ceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEE
Q 014755 175 VDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDG----RCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLN 250 (419)
Q Consensus 175 ~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~----~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d 250 (419)
+..-++..++|+|||+.|+. +..||.|.+|+..+ .....-..|.....|++++||+||++|++-+.|+++++||
T Consensus 315 g~Rv~~tsC~~nrdg~~iAa--gc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWD 392 (641)
T KOG0772|consen 315 GKRVPVTSCAWNRDGKLIAA--GCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWD 392 (641)
T ss_pred CcccCceeeecCCCcchhhh--cccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeee
Confidence 22356889999999999887 78899999999722 2223334555555899999999999999999999999999
Q ss_pred cCCce-eeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCC
Q 014755 251 HLTWK-TFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDK 329 (419)
Q Consensus 251 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (419)
++..+ ++.......
T Consensus 393 Lrq~kkpL~~~tgL~----------------------------------------------------------------- 407 (641)
T KOG0772|consen 393 LRQFKKPLNVRTGLP----------------------------------------------------------------- 407 (641)
T ss_pred ccccccchhhhcCCC-----------------------------------------------------------------
Confidence 97643 332221000
Q ss_pred CCCCcceEEEEEccCCeEEEEecCC----CCceEEEeeccCCCceeecc-cCCCeeEEEeCCCCCeEEEEeCCCcEEEe
Q 014755 330 PNPKQGIGLMSWSSDSQYICTRNDS----MPTTLWIWDICRQEPAAILV-QKDPIRAATWDPTCTRLVLCTGSSHLYMW 403 (419)
Q Consensus 330 ~~~~~~v~~~~~s~~g~~l~~~~~d----~~~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~vw 403 (419)
....-+.++|||+.++|++|..- ..|.+.+||..+-+.+..+. ....|..+.|+|.-+.|..++.||++++|
T Consensus 408 --t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~WhpkLNQi~~gsgdG~~~vy 484 (641)
T KOG0772|consen 408 --TPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHPKLNQIFAGSGDGTAHVY 484 (641)
T ss_pred --ccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCCceEEEEeecchhhheeeecCCCceEEE
Confidence 11123678999999999998642 23789999999988887776 56678999999999999999999999987
No 82
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.98 E-value=1.7e-29 Score=201.97 Aligned_cols=264 Identities=14% Similarity=0.235 Sum_probs=215.9
Q ss_pred CCEEEEEe-CCeEEEEecCCCcEEEEeecCcceeEEEEecCCC---eEEEEeccCCeEEEEEccCCcc----eeeeecCC
Q 014755 19 ARYIAVAV-DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSE---YILCGLYKRLMIQAWSLTQPEW----TCKIDEGL 90 (419)
Q Consensus 19 ~~~la~~~-~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~---~l~~~~~~~g~i~iw~~~~~~~----~~~~~~~~ 90 (419)
++.|.+|+ ||.+++||..+.......+|.++|.+++|.-... .+++++.| .++++|..+.++. +....+|.
T Consensus 115 ~~~IltgsYDg~~riWd~~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~D-qtl~Lw~~~~~~~~~~~~~~~~GHk 193 (423)
T KOG0313|consen 115 SKWILTGSYDGTSRIWDLKGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMD-QTLRLWKWNVGENKVKALKVCRGHK 193 (423)
T ss_pred CceEEEeecCCeeEEEecCCceEEEEecCCcceeeeEEEecCCccceEEEecCC-ceEEEEEecCchhhhhHHhHhcccc
Confidence 68999998 9999999998777777888999999888865333 48899987 6999999987743 23345899
Q ss_pred ccEeEEEECCCCCEEEEEecCCCeEEEEEcCC-------------------------CeEEE-eccCCCCeeeEEEccCC
Q 014755 91 AGIAYARWSPDSRHILTTSDFQLRLTVWSLLN-------------------------TACVH-VQSPKHASKGVAFTQDG 144 (419)
Q Consensus 91 ~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~-------------------------~~~~~-~~~~~~~~~~~~~~~~~ 144 (419)
..|.++...++|..+++++-|. .|++|+.++ +.++. +.+|..+|.++.|++ .
T Consensus 194 ~~V~sVsv~~sgtr~~SgS~D~-~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~ 271 (423)
T KOG0313|consen 194 RSVDSVSVDSSGTRFCSGSWDT-MLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-A 271 (423)
T ss_pred cceeEEEecCCCCeEEeecccc-eeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC-C
Confidence 9999999999999999999998 999999321 11222 678899999999998 6
Q ss_pred CEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC---CCc-eEEEEeecC
Q 014755 145 KFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP---DGR-CLLKYQAYE 220 (419)
Q Consensus 145 ~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~---~~~-~~~~~~~~~ 220 (419)
..+++++.| .+|+.||+.++.....+.. ...+.++.++|..++|+. ++.|..+++||+ ++. ..+++.+|.
T Consensus 272 ~v~yS~SwD---HTIk~WDletg~~~~~~~~-~ksl~~i~~~~~~~Ll~~--gssdr~irl~DPR~~~gs~v~~s~~gH~ 345 (423)
T KOG0313|consen 272 TVIYSVSWD---HTIKVWDLETGGLKSTLTT-NKSLNCISYSPLSKLLAS--GSSDRHIRLWDPRTGDGSVVSQSLIGHK 345 (423)
T ss_pred CceEeeccc---ceEEEEEeecccceeeeec-CcceeEeecccccceeee--cCCCCceeecCCCCCCCceeEEeeecch
Confidence 788889887 8999999999998888776 467899999999999988 888999999999 233 334555655
Q ss_pred CCCceeEEEEccCC-CeEEEEEecCcEEEEEcCCce-eeeeecccccccCCCccceeccCCCcccccceeeeccCccccc
Q 014755 221 SGLGVKSISWSPCG-QFLAVGSYDQTLRVLNHLTWK-TFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQG 298 (419)
Q Consensus 221 ~~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (419)
. .|.++.|+|.. ..|++++.|+++++||+++-+ ++..+.
T Consensus 346 n--wVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~------------------------------------- 386 (423)
T KOG0313|consen 346 N--WVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIA------------------------------------- 386 (423)
T ss_pred h--hhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeec-------------------------------------
Confidence 5 99999999966 468899999999999998755 444432
Q ss_pred cccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeecc
Q 014755 299 NSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDIC 365 (419)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~ 365 (419)
+|...|.++.|. ++.++++|+.| ++|+|+...
T Consensus 387 --------------------------------~h~DKvl~vdW~-~~~~IvSGGaD--~~l~i~~~~ 418 (423)
T KOG0313|consen 387 --------------------------------GHNDKVLSVDWN-EGGLIVSGGAD--NKLRIFKGS 418 (423)
T ss_pred --------------------------------cCCceEEEEecc-CCceEEeccCc--ceEEEeccc
Confidence 577788999996 45689999999 999998643
No 83
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.98 E-value=6.7e-30 Score=227.04 Aligned_cols=276 Identities=13% Similarity=0.214 Sum_probs=236.7
Q ss_pred cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceee-eecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCe
Q 014755 46 CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCK-IDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTA 124 (419)
Q Consensus 46 ~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~ 124 (419)
+...+.+..|. ..++++++.+ .+|++|+..++..+.. +.+|.+.|.++++...+.++++++.|. ++++||..+|+
T Consensus 207 ~~~~~~~~q~~--~~~~~~~s~~-~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~-t~rvWd~~sg~ 282 (537)
T KOG0274|consen 207 DDHVVLCLQLH--DGFFKSGSDD-STLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDK-TERVWDCSTGE 282 (537)
T ss_pred Ccchhhhheee--cCeEEecCCC-ceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCC-cEEeEecCCCc
Confidence 45678888888 5578888866 7999999999988877 999999999999988788999999998 99999999999
Q ss_pred EEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceE
Q 014755 125 CVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKV 203 (419)
Q Consensus 125 ~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i 203 (419)
+.. +.+|...+.++...+ ..+++|+.| .+|++|++.++..+..+.+|..+|.++..+ +.+++. ++.|+.|
T Consensus 283 C~~~l~gh~stv~~~~~~~--~~~~sgs~D---~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvs--gs~d~~v 353 (537)
T KOG0274|consen 283 CTHSLQGHTSSVRCLTIDP--FLLVSGSRD---NTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVS--GSYDGTV 353 (537)
T ss_pred EEEEecCCCceEEEEEccC--ceEeeccCC---ceEEEEeccCcceEEEeccccccEEEEEec--CCEEEE--EecCceE
Confidence 999 888888888887654 467777776 799999999999999999999999999987 677777 6779999
Q ss_pred EEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCc-eeeeeecccccccCCCccceeccCCCc
Q 014755 204 LIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTW-KTFAEFMHLSTVRGPCFPAVFKEVDEP 281 (419)
Q Consensus 204 ~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (419)
.+||+ ++++++.+.+|.+ .|.++.+.+. ..+++|+.|++|++||+++. +++.++.
T Consensus 354 ~VW~~~~~~cl~sl~gH~~--~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~-------------------- 410 (537)
T KOG0274|consen 354 KVWDPRTGKCLKSLSGHTG--RVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQ-------------------- 410 (537)
T ss_pred EEEEhhhceeeeeecCCcc--eEEEEEecCc-ceEEeeeeccceEeecCCchhhhhhhhc--------------------
Confidence 99999 9999999999877 8999988765 79999999999999999998 7777765
Q ss_pred ccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEE
Q 014755 282 LQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWI 361 (419)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~i 361 (419)
+|..-+..+ ...+++|.+++.| ++|++
T Consensus 411 -------------------------------------------------~h~~~v~~l--~~~~~~Lvs~~aD--~~Ik~ 437 (537)
T KOG0274|consen 411 -------------------------------------------------GHTSLVSSL--LLRDNFLVSSSAD--GTIKL 437 (537)
T ss_pred -------------------------------------------------CCccccccc--ccccceeEecccc--ccEEE
Confidence 233334333 3567899999998 99999
Q ss_pred eeccCCCceeecc--cCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEEe
Q 014755 362 WDICRQEPAAILV--QKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCVS 412 (419)
Q Consensus 362 wd~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~ 412 (419)
||..+++++..+. |.+.|+.+++. ...+++++.||++++||+.+++..+
T Consensus 438 WD~~~~~~~~~~~~~~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~~~~~~ 488 (537)
T KOG0274|consen 438 WDAEEGECLRTLEGRHVGGVSALALG--KEEILCSSDDGSVKLWDLRSGTLIR 488 (537)
T ss_pred eecccCceeeeeccCCcccEEEeecC--cceEEEEecCCeeEEEecccCchhh
Confidence 9999999998885 56889988886 4578889999999999999887665
No 84
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.98 E-value=9.4e-30 Score=197.53 Aligned_cols=277 Identities=10% Similarity=0.137 Sum_probs=212.0
Q ss_pred cCcceeEEEEec-CCCeEEEEeccCCeEEEEEccC-Ccce-eeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC
Q 014755 46 CLDKISYIEWAL-DSEYILCGLYKRLMIQAWSLTQ-PEWT-CKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN 122 (419)
Q Consensus 46 ~~~~v~~~~~s~-~~~~l~~~~~~~g~i~iw~~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~ 122 (419)
..+.|.+|+||| ...++++++.| |+||+|+++. |... +....|.++|.+++|+.||..+++++.|+ .+++||+.+
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~SWD-~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk-~~k~wDL~S 103 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAGSWD-GTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDK-QAKLWDLAS 103 (347)
T ss_pred cccchheeEeccccCceEEecccC-CceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCC-ceEEEEccC
Confidence 467899999999 44555577777 8999999986 3332 34567889999999999999999999998 999999999
Q ss_pred CeEEEeccCCCCeeeEEEccCCC--EEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCC
Q 014755 123 TACVHVQSPKHASKGVAFTQDGK--FAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLE 200 (419)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~ 200 (419)
++...+..|..++..+.|-+... .|++|+.| .+|+.||.+...++..+... ..++++.. -...+++ +..+
T Consensus 104 ~Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWD---KTlKfWD~R~~~pv~t~~LP-eRvYa~Dv--~~pm~vV--ata~ 175 (347)
T KOG0647|consen 104 GQVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWD---KTLKFWDTRSSNPVATLQLP-ERVYAADV--LYPMAVV--ATAE 175 (347)
T ss_pred CCeeeeeecccceeEEEEecCCCcceeEecccc---cceeecccCCCCeeeeeecc-ceeeehhc--cCceeEE--EecC
Confidence 99999999999999999977664 89999998 89999999998888877653 34555443 2344555 5668
Q ss_pred ceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeee--c-ccccccCCCccceec
Q 014755 201 YKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEF--M-HLSTVRGPCFPAVFK 276 (419)
Q Consensus 201 ~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~--~-~~~~~~~~~~~~~~~ 276 (419)
+.|.+|++ ++..........-.-.+++++..+|.+..+.|+-+|.+-+..+..+.+...| + |...-. .
T Consensus 176 r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~--~------ 247 (347)
T KOG0647|consen 176 RHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNS--V------ 247 (347)
T ss_pred CcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCC--C------
Confidence 89999999 4332222111112226899999999888899999999999998876443332 2 221100 0
Q ss_pred cCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCC
Q 014755 277 EVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMP 356 (419)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~ 356 (419)
.+.-..|++++|+|.-..|++++.|
T Consensus 248 -----------------------------------------------------~~~VYaVNsi~FhP~hgtlvTaGsD-- 272 (347)
T KOG0647|consen 248 -----------------------------------------------------NDDVYAVNSIAFHPVHGTLVTAGSD-- 272 (347)
T ss_pred -----------------------------------------------------CCceEEecceEeecccceEEEecCC--
Confidence 0012347899999999999999999
Q ss_pred ceEEEeeccCCCceeec-ccCCCeeEEEeCCCCCeEEEEe
Q 014755 357 TTLWIWDICRQEPAAIL-VQKDPIRAATWDPTCTRLVLCT 395 (419)
Q Consensus 357 ~~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~ 395 (419)
|+..+||-+....+... .|..+|++.+|+.+|.++|.+.
T Consensus 273 Gtf~FWDkdar~kLk~s~~~~qpItcc~fn~~G~ifaYA~ 312 (347)
T KOG0647|consen 273 GTFSFWDKDARTKLKTSETHPQPITCCSFNRNGSIFAYAL 312 (347)
T ss_pred ceEEEecchhhhhhhccCcCCCccceeEecCCCCEEEEEe
Confidence 99999998876655554 4999999999999999887763
No 85
>PTZ00421 coronin; Provisional
Probab=99.98 E-value=8.4e-29 Score=219.90 Aligned_cols=281 Identities=10% Similarity=0.154 Sum_probs=207.2
Q ss_pred cceeEEEEecCCCeEEEEeccCCeEEEEEccCC----------cce---eeeecCCccEeEEEECC-CCCEEEEEecCCC
Q 014755 48 DKISYIEWALDSEYILCGLYKRLMIQAWSLTQP----------EWT---CKIDEGLAGIAYARWSP-DSRHILTTSDFQL 113 (419)
Q Consensus 48 ~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~----------~~~---~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~ 113 (419)
..|.....++|+..+++++.+ .....|+...+ +.. ..+.+|.+.|.+++|+| ++++|++++.|+
T Consensus 21 ~~i~~~~~~~d~~~~~~~n~~-~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~Dg- 98 (493)
T PTZ00421 21 LNVTPSTALWDCSNTIACNDR-FIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDG- 98 (493)
T ss_pred eccccccccCCCCCcEeECCc-eEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCC-
Confidence 345555566665555555433 44555554332 211 24678999999999999 888999999988
Q ss_pred eEEEEEcCCCe-------EEE-eccCCCCeeeEEEccCC-CEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeee
Q 014755 114 RLTVWSLLNTA-------CVH-VQSPKHASKGVAFTQDG-KFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIE 184 (419)
Q Consensus 114 ~i~iwd~~~~~-------~~~-~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~ 184 (419)
.|++||+.++. ++. +.+|...|.+++|+|++ .+|++++.| +.|++||+++++.+..+..|...|.+++
T Consensus 99 tIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~D---gtVrIWDl~tg~~~~~l~~h~~~V~sla 175 (493)
T PTZ00421 99 TIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGAD---MVVNVWDVERGKAVEVIKCHSDQITSLE 175 (493)
T ss_pred EEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCC---CEEEEEECCCCeEEEEEcCCCCceEEEE
Confidence 99999997642 233 77899999999999986 688888887 8999999999999999999999999999
Q ss_pred ECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEE----ecCcEEEEEcCCcee-ee
Q 014755 185 WSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGS----YDQTLRVLNHLTWKT-FA 258 (419)
Q Consensus 185 ~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~----~d~~i~v~d~~~~~~-~~ 258 (419)
|+|++..+++ ++.|+.|++||+ +++.+..+..|.+. .+..+.|.+++..+++++ .|+.|++||+++... +.
T Consensus 176 ~spdG~lLat--gs~Dg~IrIwD~rsg~~v~tl~~H~~~-~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~ 252 (493)
T PTZ00421 176 WNLDGSLLCT--TSKDKKLNIIDPRDGTIVSSVEAHASA-KSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYS 252 (493)
T ss_pred EECCCCEEEE--ecCCCEEEEEECCCCcEEEEEecCCCC-cceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCcee
Confidence 9999999988 778999999999 88888888776542 345678999888777665 478999999876432 11
Q ss_pred eecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEE
Q 014755 259 EFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGL 338 (419)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 338 (419)
.... .+...+..
T Consensus 253 ~~~~--------------------------------------------------------------------d~~~~~~~ 264 (493)
T PTZ00421 253 TVDL--------------------------------------------------------------------DQSSALFI 264 (493)
T ss_pred Eecc--------------------------------------------------------------------CCCCceEE
Confidence 1110 01223556
Q ss_pred EEEccCCeEEEEecC-CCCceEEEeeccCCCceeecc--cCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCC
Q 014755 339 MSWSSDSQYICTRND-SMPTTLWIWDICRQEPAAILV--QKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGA 408 (419)
Q Consensus 339 ~~~s~~g~~l~~~~~-d~~~~i~iwd~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~ 408 (419)
..|++++++|++++. | +.|++||+.++++..... +..++..++|.|.-..=+.. --..++|.+...
T Consensus 265 ~~~d~d~~~L~lggkgD--g~Iriwdl~~~~~~~~~~~~s~~~~~g~~~~pk~~~dv~~--~Ei~r~~~l~~~ 333 (493)
T PTZ00421 265 PFFDEDTNLLYIGSKGE--GNIRCFELMNERLTFCSSYSSVEPHKGLCMMPKWSLDTRK--CEIARFYALTYH 333 (493)
T ss_pred EEEcCCCCEEEEEEeCC--CeEEEEEeeCCceEEEeeccCCCCCcceEecccccccccc--eeeeEEEEecCC
Confidence 789999999988874 7 999999999998776553 56678899998854321211 123466666544
No 86
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.98 E-value=1.7e-30 Score=228.36 Aligned_cols=244 Identities=18% Similarity=0.279 Sum_probs=197.3
Q ss_pred ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccC--------------------------------C------------
Q 014755 45 SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQ--------------------------------P------------ 80 (419)
Q Consensus 45 ~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~--------------------------------~------------ 80 (419)
.|.+.|+++.||+||+|||+|+.| +.|+||.+.. .
T Consensus 265 ah~gaIw~mKFS~DGKyLAsaGeD-~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~ 343 (712)
T KOG0283|consen 265 AHKGAIWAMKFSHDGKYLASAGED-GVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGS 343 (712)
T ss_pred ccCCcEEEEEeCCCCceeeecCCC-ceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccccccc
Confidence 489999999999999999999987 8999999865 0
Q ss_pred ----------------cceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEcc-C
Q 014755 81 ----------------EWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQ-D 143 (419)
Q Consensus 81 ----------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~ 143 (419)
++++.+.+|.+.|.++.||.+ .+|++++.|+ +|++|++...+++....|..-|+|++|+| |
T Consensus 344 ~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSMDK-TVRLWh~~~~~CL~~F~HndfVTcVaFnPvD 421 (712)
T KOG0283|consen 344 QSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSMDK-TVRLWHPGRKECLKVFSHNDFVTCVAFNPVD 421 (712)
T ss_pred CCccccCCCccccccccchhhhhccchhheecccccC-CeeEeccccc-cEEeecCCCcceeeEEecCCeeEEEEecccC
Confidence 122334568899999999965 5799999998 99999999999999999999999999999 4
Q ss_pred CCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCc-eEEEEeecCC-
Q 014755 144 GKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGR-CLLKYQAYES- 221 (419)
Q Consensus 144 ~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~-~~~~~~~~~~- 221 (419)
.+++++|+-| +.|+||++...+.+.-...+ .-|++++|.|||+..++ ++.+|.+++|+..+. .......+.+
T Consensus 422 DryFiSGSLD---~KvRiWsI~d~~Vv~W~Dl~-~lITAvcy~PdGk~avI--Gt~~G~C~fY~t~~lk~~~~~~I~~~~ 495 (712)
T KOG0283|consen 422 DRYFISGSLD---GKVRLWSISDKKVVDWNDLR-DLITAVCYSPDGKGAVI--GTFNGYCRFYDTEGLKLVSDFHIRLHN 495 (712)
T ss_pred CCcEeecccc---cceEEeecCcCeeEeehhhh-hhheeEEeccCCceEEE--EEeccEEEEEEccCCeEEEeeeEeecc
Confidence 5899999998 89999999877666554444 78999999999999999 788999999999543 3333322211
Q ss_pred -----CCceeEEEEccCC-CeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCcc
Q 014755 222 -----GLGVKSISWSPCG-QFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDF 295 (419)
Q Consensus 222 -----~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (419)
...|+++.|.|.. ..+++.+.|..|||||.++..++..|+....
T Consensus 496 ~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n------------------------------ 545 (712)
T KOG0283|consen 496 KKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRN------------------------------ 545 (712)
T ss_pred CccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhccccc------------------------------
Confidence 1269999999854 3578888899999999988777777652111
Q ss_pred ccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccC
Q 014755 296 IQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICR 366 (419)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~ 366 (419)
...-....|+.||++|+++++| ..|+||+...
T Consensus 546 -------------------------------------~~SQ~~Asfs~Dgk~IVs~seD--s~VYiW~~~~ 577 (712)
T KOG0283|consen 546 -------------------------------------TSSQISASFSSDGKHIVSASED--SWVYIWKNDS 577 (712)
T ss_pred -------------------------------------CCcceeeeEccCCCEEEEeecC--ceEEEEeCCC
Confidence 1112467899999999999999 9999999743
No 87
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.98 E-value=1.5e-29 Score=205.66 Aligned_cols=279 Identities=14% Similarity=0.179 Sum_probs=238.0
Q ss_pred cceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE
Q 014755 48 DKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH 127 (419)
Q Consensus 48 ~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~ 127 (419)
..+.++...|....+++|+.| ..+.++|...++.+..+.+|...|+.+.|+|+...+++++.+. .|++|.........
T Consensus 220 pgi~ald~~~s~~~ilTGG~d-~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~-~i~vws~~~~s~~~ 297 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTGGED-KTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADE-IIRVWSVPLSSEPT 297 (506)
T ss_pred CCeeEEeecCCCCcceecCCC-CceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcc-eEEeeccccccCcc
Confidence 468888888887889999987 5899999999999999999999999999999999999999988 99999998766555
Q ss_pred -eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEec--cccceeeeeECCCCCeEEEEcCCCCceEE
Q 014755 128 -VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAV--DTLDLADIEWSPDDSAIVIWDSPLEYKVL 204 (419)
Q Consensus 128 -~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~~~i~ 204 (419)
...|..+|+.+..+|.|.||++++.| ++..+.|++++..+..... ..-.+++.+|+|||..+.. +..|+.++
T Consensus 298 ~~~~h~~~V~~ls~h~tgeYllsAs~d---~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgt--gt~d~~vk 372 (506)
T KOG0289|consen 298 SSRPHEEPVTGLSLHPTGEYLLSASND---GTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGT--GTPDGVVK 372 (506)
T ss_pred ccccccccceeeeeccCCcEEEEecCC---ceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEec--cCCCceEE
Confidence 78899999999999999999999987 8999999999988766554 3345899999999988887 88899999
Q ss_pred EEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCccc
Q 014755 205 IYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQ 283 (419)
Q Consensus 205 ~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (419)
+||+ ++..+..|.+|.. +|..++|+.+|-+|++++.|+.|++||++..+..+++...
T Consensus 373 iwdlks~~~~a~Fpght~--~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~-------------------- 430 (506)
T KOG0289|consen 373 IWDLKSQTNVAKFPGHTG--PVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLD-------------------- 430 (506)
T ss_pred EEEcCCccccccCCCCCC--ceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeecc--------------------
Confidence 9999 7778888888666 9999999999999999999999999999887766665411
Q ss_pred ccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEee
Q 014755 284 LDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWD 363 (419)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd 363 (419)
...++.++.|.+.|.+|+.++.+ =.|++++
T Consensus 431 ------------------------------------------------~~~~v~s~~fD~SGt~L~~~g~~--l~Vy~~~ 460 (506)
T KOG0289|consen 431 ------------------------------------------------EKKEVNSLSFDQSGTYLGIAGSD--LQVYICK 460 (506)
T ss_pred ------------------------------------------------ccccceeEEEcCCCCeEEeecce--eEEEEEe
Confidence 12247899999999999999877 6666666
Q ss_pred ccCCC--ceeec-ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeec
Q 014755 364 ICRQE--PAAIL-VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTP 405 (419)
Q Consensus 364 ~~~~~--~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 405 (419)
-.+.+ +...+ .|.+..+++.|....++++++|.|..++++.+
T Consensus 461 k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 461 KKTKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLYAL 505 (506)
T ss_pred cccccceeeehhhhcccccceeeecccceEEeeccchhheEEeec
Confidence 44443 33333 48889999999999999999999999988865
No 88
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.98 E-value=7.5e-30 Score=209.01 Aligned_cols=288 Identities=15% Similarity=0.207 Sum_probs=230.5
Q ss_pred CcceeEEEEecCCCeEEEEeccCCeEEEEEccCC--cceeeeecCCccEeEEEECCCCC-EEEEEecCCCeEEEEEcCCC
Q 014755 47 LDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP--EWTCKIDEGLAGIAYARWSPDSR-HILTTSDFQLRLTVWSLLNT 123 (419)
Q Consensus 47 ~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~~i~iwd~~~~ 123 (419)
.+.|+++.|+|....|++++.| ++++||.++.. ..++.+.-...+|.+.+|.|+|+ .+++++... .++.||+.+.
T Consensus 213 ~~~I~sv~FHp~~plllvaG~d-~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrk-y~ysyDle~a 290 (514)
T KOG2055|consen 213 HGGITSVQFHPTAPLLLVAGLD-GTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRK-YLYSYDLETA 290 (514)
T ss_pred cCCceEEEecCCCceEEEecCC-CcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccce-EEEEeecccc
Confidence 4789999999999999999988 89999998643 34555555678899999999999 777777776 9999999998
Q ss_pred eEEEec---cCC-CCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCC
Q 014755 124 ACVHVQ---SPK-HASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPL 199 (419)
Q Consensus 124 ~~~~~~---~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~ 199 (419)
+...+. +.. ..+..+..+|++++|+..+.. |.|.+....+++.+..++. ++.+..++|+.+++.|++ .+.
T Consensus 291 k~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~---G~I~lLhakT~eli~s~Ki-eG~v~~~~fsSdsk~l~~--~~~ 364 (514)
T KOG2055|consen 291 KVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNN---GHIHLLHAKTKELITSFKI-EGVVSDFTFSSDSKELLA--SGG 364 (514)
T ss_pred ccccccCCCCcccchhheeEecCCCCeEEEcccC---ceEEeehhhhhhhhheeee-ccEEeeEEEecCCcEEEE--EcC
Confidence 776632 222 245788999999999999886 8999999999999888876 478999999999999888 566
Q ss_pred CceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccC
Q 014755 200 EYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEV 278 (419)
Q Consensus 200 ~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (419)
+|.|++||+ ...+++.+...... .-++++.++++.++|+|+..|.|-|||.++...-. .+
T Consensus 365 ~GeV~v~nl~~~~~~~rf~D~G~v-~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~---~P--------------- 425 (514)
T KOG2055|consen 365 TGEVYVWNLRQNSCLHRFVDDGSV-HGTSLCISLNGSYLATGSDSGIVNIYDGNSCFAST---NP--------------- 425 (514)
T ss_pred CceEEEEecCCcceEEEEeecCcc-ceeeeeecCCCceEEeccCcceEEEeccchhhccC---CC---------------
Confidence 899999999 67788877654432 35678888999999999999999999976421100 11
Q ss_pred CCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCce
Q 014755 279 DEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTT 358 (419)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~ 358 (419)
+|...+..-...|+++.|+||+++||.++.-+...
T Consensus 426 ---------------------------------------------kPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~kna 460 (514)
T KOG2055|consen 426 ---------------------------------------------KPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNA 460 (514)
T ss_pred ---------------------------------------------CchhhhhhhheeeeeeeeCcchhhhhhhhhccccc
Confidence 11111222344589999999999999998766689
Q ss_pred EEEeeccCCCceeecc----cCCCeeEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 359 LWIWDICRQEPAAILV----QKDPIRAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 359 i~iwd~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
+++-.+.+.....-.. .-+.|+|++|||.|.+||.|..+|.+.+|.+.
T Consensus 461 lrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 461 LRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH 512 (514)
T ss_pred eEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEeec
Confidence 9999998877665442 44679999999999999999999999999874
No 89
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.98 E-value=4.2e-28 Score=181.02 Aligned_cols=289 Identities=13% Similarity=0.186 Sum_probs=229.0
Q ss_pred EEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEcc------CC----c-c----eeeeecCCccEeEEEECCCCCE
Q 014755 40 VVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLT------QP----E-W----TCKIDEGLAGIAYARWSPDSRH 104 (419)
Q Consensus 40 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~------~~----~-~----~~~~~~~~~~v~~~~~~~~~~~ 104 (419)
.+..+.....|.+++|+|.|.+.++|+.. .+.+|.-.. .+ + + ..+-+.|.+.|.|.+|+|+|+.
T Consensus 25 ~i~~l~dsqairav~fhp~g~lyavgsns-kt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~gel 103 (350)
T KOG0641|consen 25 AINILEDSQAIRAVAFHPAGGLYAVGSNS-KTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGEL 103 (350)
T ss_pred EEEEecchhheeeEEecCCCceEEeccCC-ceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCe
Confidence 34456677889999999999999999866 588876432 11 1 1 1123457788999999999999
Q ss_pred EEEEecCCCeEEEEEcCC------CeEEEeccCCCCeeeEEEccC----CCEEEEEeecCCCCeEEEEeccCCeEEEEEe
Q 014755 105 ILTTSDFQLRLTVWSLLN------TACVHVQSPKHASKGVAFTQD----GKFAAICTRRDCKDYINLLSCHTWEIMGVFA 174 (419)
Q Consensus 105 l~~~~~~~~~i~iwd~~~------~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~ 174 (419)
++++++|+ +|++...+. |....+..|.+.+..++|-.+ +..|++++.. +..|++-|..+++....+.
T Consensus 104 iatgsndk-~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gag--dc~iy~tdc~~g~~~~a~s 180 (350)
T KOG0641|consen 104 IATGSNDK-TIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAG--DCKIYITDCGRGQGFHALS 180 (350)
T ss_pred EEecCCCc-eEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCC--cceEEEeecCCCCcceeec
Confidence 99999998 999987654 334447788899999999543 4677777654 3588999999999999999
Q ss_pred ccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCC-----CCceeEEEEccCCCeEEEEEecCcEEE
Q 014755 175 VDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYES-----GLGVKSISWSPCGQFLAVGSYDQTLRV 248 (419)
Q Consensus 175 ~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~-----~~~v~~~~~s~~~~~l~~~~~d~~i~v 248 (419)
+|.+.|.++- +=++-.++. ++.|.+|++||+ -..++..+....+ ...|.+++..|.|++|++|-.|....+
T Consensus 181 ghtghilaly-swn~~m~~s--gsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~l 257 (350)
T KOG0641|consen 181 GHTGHILALY-SWNGAMFAS--GSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCML 257 (350)
T ss_pred CCcccEEEEE-EecCcEEEc--cCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEE
Confidence 9998887653 224555555 888999999999 5556665543222 147999999999999999999999999
Q ss_pred EEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCC
Q 014755 249 LNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTD 328 (419)
Q Consensus 249 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (419)
||++.+++++.+.
T Consensus 258 ydirg~r~iq~f~------------------------------------------------------------------- 270 (350)
T KOG0641|consen 258 YDIRGGRMIQRFH------------------------------------------------------------------- 270 (350)
T ss_pred EEeeCCceeeeeC-------------------------------------------------------------------
Confidence 9999999888764
Q ss_pred CCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCC---Cc-eeec-ccCCCeeEEEeCCCCCeEEEEeCCCcEEEe
Q 014755 329 KPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQ---EP-AAIL-VQKDPIRAATWDPTCTRLVLCTGSSHLYMW 403 (419)
Q Consensus 329 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~---~~-~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw 403 (419)
.|...|.++.|||...|+.+++.| ..|++=|++.. ++ .... .|...+..+.|+|..-.+++.+.|.++.+|
T Consensus 271 --phsadir~vrfsp~a~yllt~syd--~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlw 346 (350)
T KOG0641|consen 271 --PHSADIRCVRFSPGAHYLLTCSYD--MKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLW 346 (350)
T ss_pred --CCccceeEEEeCCCceEEEEeccc--ceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEEe
Confidence 267779999999999999999999 99999998752 22 1222 599999999999999999999999999999
Q ss_pred ecC
Q 014755 404 TPS 406 (419)
Q Consensus 404 ~~~ 406 (419)
.+.
T Consensus 347 a~~ 349 (350)
T KOG0641|consen 347 ALN 349 (350)
T ss_pred ccC
Confidence 875
No 90
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.97 E-value=1.2e-28 Score=215.96 Aligned_cols=356 Identities=13% Similarity=0.166 Sum_probs=261.0
Q ss_pred CEEEEEe-CCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEE
Q 014755 20 RYIAVAV-DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYAR 97 (419)
Q Consensus 20 ~~la~~~-~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~ 97 (419)
+.|+.|+ +|.+.||++.+++.+..+. +...|+++.=+|-=..+|.|..+ |+|.++++..++.+..++...++|+++.
T Consensus 173 NKIvvGs~~G~lql~Nvrt~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~-G~ViifNlK~dkil~sFk~d~g~VtslS 251 (910)
T KOG1539|consen 173 NKIVVGSSQGRLQLWNVRTGKVVYTFQEFFSRITAIEQSPALDVVAIGLEN-GTVIIFNLKFDKILMSFKQDWGRVTSLS 251 (910)
T ss_pred eeEEEeecCCcEEEEEeccCcEEEEecccccceeEeccCCcceEEEEeccC-ceEEEEEcccCcEEEEEEccccceeEEE
Confidence 3455555 8999999999999999887 67899999999988899999977 9999999999999989876679999999
Q ss_pred ECCCCCEEEEEecCCCeEEEEEcCCCeEEE--eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEE--EeccCC--eEEE
Q 014755 98 WSPDSRHILTTSDFQLRLTVWSLLNTACVH--VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINL--LSCHTW--EIMG 171 (419)
Q Consensus 98 ~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i--~d~~~~--~~~~ 171 (419)
|..||+.+++.+...|.+.+||++..+... ...|.+.+....|.|....+++++.| ..+++ +|...| +.++
T Consensus 252 FrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~D---nSlk~~vfD~~dg~pR~LR 328 (910)
T KOG1539|consen 252 FRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGAD---NSLKVWVFDSGDGVPRLLR 328 (910)
T ss_pred eccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCC---CceeEEEeeCCCCcchhee
Confidence 999999888877765699999999987776 44677889999999999999999887 45554 454444 4566
Q ss_pred EEeccccceeeeeEC-CCCCeEEEEcCCCCce------------------------------------------------
Q 014755 172 VFAVDTLDLADIEWS-PDDSAIVIWDSPLEYK------------------------------------------------ 202 (419)
Q Consensus 172 ~~~~~~~~v~~~~~~-~~~~~l~~~~~~~~~~------------------------------------------------ 202 (419)
.-.+|..+..++.|. .+|..+.. ...|++
T Consensus 329 ~R~GHs~Pp~~irfy~~~g~~ils--a~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~ 406 (910)
T KOG1539|consen 329 SRGGHSAPPSCIRFYGSQGHFILS--AKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENA 406 (910)
T ss_pred eccCCCCCchheeeeccCcEEEEe--cccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccc
Confidence 667788888888877 44555443 333333
Q ss_pred -----------------EEEEcCCCceE--EEEeec---CCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeee
Q 014755 203 -----------------VLIYSPDGRCL--LKYQAY---ESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEF 260 (419)
Q Consensus 203 -----------------i~~~d~~~~~~--~~~~~~---~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 260 (419)
++.|+...+.+ ..+... .....+++++.++.|++.+.|...|.|-+|++.+|-....+
T Consensus 407 RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf 486 (910)
T KOG1539|consen 407 REKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSF 486 (910)
T ss_pred hhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeeccc
Confidence 34444411111 111111 01236899999999999999999999999999999888887
Q ss_pred c----ccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcce
Q 014755 261 M----HLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGI 336 (419)
Q Consensus 261 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 336 (419)
. |..++.+ +++..-+........+ .....|+...... . ..-.-...+
T Consensus 487 ~~~~ah~~~V~g--------------------la~D~~n~~~vsa~~~-Gilkfw~f~~k~l-------~-~~l~l~~~~ 537 (910)
T KOG1539|consen 487 GDSPAHKGEVTG--------------------LAVDGTNRLLVSAGAD-GILKFWDFKKKVL-------K-KSLRLGSSI 537 (910)
T ss_pred ccCccccCceeE--------------------EEecCCCceEEEccCc-ceEEEEecCCcce-------e-eeeccCCCc
Confidence 3 4444422 2222111111111122 2223333322110 0 000123346
Q ss_pred EEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec-ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEEe
Q 014755 337 GLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL-VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCVS 412 (419)
Q Consensus 337 ~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~ 412 (419)
..+..+.....+|.+.+| -.|+++|..+.+..+.+ +|.+.|++++|||||++|++++.|++|++||+.++.++.
T Consensus 538 ~~iv~hr~s~l~a~~~dd--f~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID 612 (910)
T KOG1539|consen 538 TGIVYHRVSDLLAIALDD--FSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLID 612 (910)
T ss_pred ceeeeeehhhhhhhhcCc--eeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceee
Confidence 778888888889999998 99999999999988766 699999999999999999999999999999999988764
No 91
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.97 E-value=1.3e-29 Score=207.48 Aligned_cols=295 Identities=12% Similarity=0.100 Sum_probs=240.0
Q ss_pred EEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceee----------------e--ecCCccEeEEEECCCCC
Q 014755 42 QLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCK----------------I--DEGLAGIAYARWSPDSR 103 (419)
Q Consensus 42 ~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~----------------~--~~~~~~v~~~~~~~~~~ 103 (419)
..-.|.-++.+++++|++++.++++.+ |+|.-|++.+++.... . ..|...+.+++.++||+
T Consensus 137 ~~~~H~~s~~~vals~d~~~~fsask~-g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgk 215 (479)
T KOG0299|consen 137 VIGKHQLSVTSVALSPDDKRVFSASKD-GTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGK 215 (479)
T ss_pred eeccccCcceEEEeeccccceeecCCC-cceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCc
Confidence 344588999999999999999999987 8999999987753210 0 25667799999999999
Q ss_pred EEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceee
Q 014755 104 HILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLAD 182 (419)
Q Consensus 104 ~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~ 182 (419)
+|++++.+. .|.||+.++.+.+. +.+|...|.+++|-.....+++++.| +.|++|+++....+.++.+|...|..
T Consensus 216 ylatgg~d~-~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~D---rsvkvw~~~~~s~vetlyGHqd~v~~ 291 (479)
T KOG0299|consen 216 YLATGGRDR-HVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASAD---RSVKVWSIDQLSYVETLYGHQDGVLG 291 (479)
T ss_pred EEEecCCCc-eEEEecCcccchhhcccccccceeeeeeecCccceeeeecC---CceEEEehhHhHHHHHHhCCccceee
Confidence 999999988 99999999999988 79999999999999888899999987 89999999999999999999999999
Q ss_pred eeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecc
Q 014755 183 IEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMH 262 (419)
Q Consensus 183 ~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 262 (419)
+....-++.+.+ +..|+++++|++.......+.++.. .+.|++|-.+ ..+++|+.+|.|.+|++...+++.+...
T Consensus 292 IdaL~reR~vtV--GgrDrT~rlwKi~eesqlifrg~~~--sidcv~~In~-~HfvsGSdnG~IaLWs~~KKkplf~~~~ 366 (479)
T KOG0299|consen 292 IDALSRERCVTV--GGRDRTVRLWKIPEESQLIFRGGEG--SIDCVAFIND-EHFVSGSDNGSIALWSLLKKKPLFTSRL 366 (479)
T ss_pred echhcccceEEe--ccccceeEEEeccccceeeeeCCCC--CeeeEEEecc-cceeeccCCceEEEeeecccCceeEeec
Confidence 998888888877 7789999999995444445556554 7889998754 5889999999999999999998887763
Q ss_pred cccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEc
Q 014755 263 LSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWS 342 (419)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 342 (419)
...+... . .-..+..+|++++..
T Consensus 367 AHgv~~~-----------------------------------------------------~----~~~~~~~Witsla~i 389 (479)
T KOG0299|consen 367 AHGVIPE-----------------------------------------------------L----DPVNGNFWITSLAVI 389 (479)
T ss_pred cccccCC-----------------------------------------------------c----cccccccceeeeEec
Confidence 3332110 0 001244689999999
Q ss_pred cCCeEEEEecCCCCceEEEeeccCC----CceeecccCCCeeEEEeCCCCCeEEEE-eCCCcEEEeec
Q 014755 343 SDSQYICTRNDSMPTTLWIWDICRQ----EPAAILVQKDPIRAATWDPTCTRLVLC-TGSSHLYMWTP 405 (419)
Q Consensus 343 ~~g~~l~~~~~d~~~~i~iwd~~~~----~~~~~~~~~~~v~~~~~s~~~~~l~s~-~~dg~i~vw~~ 405 (419)
|...++|+|+.+ |.|++|-+..+ +++..+.-.+.|++++|+++|++|++| +....+--|-.
T Consensus 390 ~~sdL~asGS~~--G~vrLW~i~~g~r~i~~l~~ls~~GfVNsl~f~~sgk~ivagiGkEhRlGRW~~ 455 (479)
T KOG0299|consen 390 PGSDLLASGSWS--GCVRLWKIEDGLRAINLLYSLSLVGFVNSLAFSNSGKRIVAGIGKEHRLGRWWC 455 (479)
T ss_pred ccCceEEecCCC--CceEEEEecCCccccceeeecccccEEEEEEEccCCCEEEEecccccccceeeE
Confidence 999999999999 99999999887 234444578899999999999966554 44555555543
No 92
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.97 E-value=1.4e-28 Score=203.89 Aligned_cols=333 Identities=13% Similarity=0.165 Sum_probs=251.9
Q ss_pred ccccCeEEcCCCCEEEEEeCCeEEEEecCCCcEEE-EeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCc-----
Q 014755 8 KQTGPSCFSPNARYIAVAVDYRLVVRDAHSFKVVQ-LFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPE----- 81 (419)
Q Consensus 8 ~~~~~~~~s~d~~~la~~~~~~i~i~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~----- 81 (419)
.+..+++|.++|..+-.-|+|.|.||+..+.+..+ ...|.+.|.++....+|.+|- |+.| ..|..||-.-.+
T Consensus 247 k~Vl~v~F~engdviTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~GtllS-GgKD-Rki~~Wd~~y~k~r~~e 324 (626)
T KOG2106|consen 247 KFVLCVTFLENGDVITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGTLLS-GGKD-RKIILWDDNYRKLRETE 324 (626)
T ss_pred eEEEEEEEcCCCCEEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCccEee-cCcc-ceEEecccccccccccc
Confidence 45556899999987766689999999998877665 346999999999999997665 8877 599999932110
Q ss_pred ------cee-----------------------------eeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEE
Q 014755 82 ------WTC-----------------------------KIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACV 126 (419)
Q Consensus 82 ------~~~-----------------------------~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~ 126 (419)
.++ ...+|......++.+|+...+++++.|+ .+++|+ ..++.
T Consensus 325 lPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk-~v~lW~--~~k~~ 401 (626)
T KOG2106|consen 325 LPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDK-HVRLWN--DHKLE 401 (626)
T ss_pred CchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcc-eEEEcc--CCcee
Confidence 001 1123566778899999999999999998 999999 44555
Q ss_pred EeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEE
Q 014755 127 HVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIY 206 (419)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~ 206 (419)
.......+..++.|+|.| .++.|... |...+.|.++...+..-.. +.++.+++|+|+|.++++ ++.|+.|++|
T Consensus 402 wt~~~~d~~~~~~fhpsg-~va~Gt~~---G~w~V~d~e~~~lv~~~~d-~~~ls~v~ysp~G~~lAv--gs~d~~iyiy 474 (626)
T KOG2106|consen 402 WTKIIEDPAECADFHPSG-VVAVGTAT---GRWFVLDTETQDLVTIHTD-NEQLSVVRYSPDGAFLAV--GSHDNHIYIY 474 (626)
T ss_pred EEEEecCceeEeeccCcc-eEEEeecc---ceEEEEecccceeEEEEec-CCceEEEEEcCCCCEEEE--ecCCCeEEEE
Confidence 555567788999999999 88888876 8999999998666555444 889999999999999999 8889999999
Q ss_pred cC--CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccc
Q 014755 207 SP--DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQL 284 (419)
Q Consensus 207 d~--~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (419)
.+ +|........+.. .+++.+.||+|++++.+-+.|-.|..|....-+.....+ .+.|.......|
T Consensus 475 ~Vs~~g~~y~r~~k~~g-s~ithLDwS~Ds~~~~~~S~d~eiLyW~~~~~~~~ts~k----------DvkW~t~~c~lG- 542 (626)
T KOG2106|consen 475 RVSANGRKYSRVGKCSG-SPITHLDWSSDSQFLVSNSGDYEILYWKPSECKQITSVK----------DVKWATYTCTLG- 542 (626)
T ss_pred EECCCCcEEEEeeeecC-ceeEEeeecCCCceEEeccCceEEEEEccccCcccceec----------ceeeeeeEEEEE-
Confidence 88 6666666655444 599999999999999999999999999543322222211 122221111001
Q ss_pred cceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeec
Q 014755 285 DMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDI 364 (419)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~ 364 (419)
+.+. ...+...|..++-+.+.+++|+|.+. |.|++|..
T Consensus 543 --------------------------F~v~--------------g~s~~t~i~a~~rs~~~~~lA~gdd~--g~v~lf~y 580 (626)
T KOG2106|consen 543 --------------------------FEVF--------------GGSDGTDINAVARSHCEKLLASGDDF--GKVHLFSY 580 (626)
T ss_pred --------------------------EEEe--------------cccCCchHHHhhhhhhhhhhhccccC--ceEEEEcc
Confidence 0000 01244557778888999999999988 99999987
Q ss_pred cCCCce----eecccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 365 CRQEPA----AILVQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 365 ~~~~~~----~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
.-.++. ...+|.+.|++++|..+...|++.+.|..|..|++.
T Consensus 581 Pc~s~rA~~he~~ghs~~vt~V~Fl~~d~~li~tg~D~Si~qW~lv 626 (626)
T KOG2106|consen 581 PCSSPRAPSHEYGGHSSHVTNVAFLCKDSHLISTGKDTSIMQWRLV 626 (626)
T ss_pred ccCCCcccceeeccccceeEEEEEeeCCceEEecCCCceEEEEEeC
Confidence 654433 333699999999999999999888899999999873
No 93
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.97 E-value=1.3e-27 Score=205.61 Aligned_cols=278 Identities=12% Similarity=0.075 Sum_probs=203.4
Q ss_pred CeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEE
Q 014755 60 EYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVA 139 (419)
Q Consensus 60 ~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~ 139 (419)
+.+++++.+ +.+++||+.+++....+..+. .+.+++|+|+++.+++++...+.|++||+.+++..........+..++
T Consensus 2 ~~~~s~~~d-~~v~~~d~~t~~~~~~~~~~~-~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 79 (300)
T TIGR03866 2 KAYVSNEKD-NTISVIDTATLEVTRTFPVGQ-RPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPDPELFA 79 (300)
T ss_pred cEEEEecCC-CEEEEEECCCCceEEEEECCC-CCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCCccEEE
Confidence 456677755 899999999998877776544 467899999999876554333499999999988766222233457889
Q ss_pred EccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEee
Q 014755 140 FTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQA 218 (419)
Q Consensus 140 ~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~ 218 (419)
|+|+++.+++++.+ ++.+++||+++.+.+..+..+ ..+..++|+|+++.+++... ....+..||. +++.......
T Consensus 80 ~~~~g~~l~~~~~~--~~~l~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~-~~~~~~~~d~~~~~~~~~~~~ 155 (300)
T TIGR03866 80 LHPNGKILYIANED--DNLVTVIDIETRKVLAEIPVG-VEPEGMAVSPDGKIVVNTSE-TTNMAHFIDTKTYEIVDNVLV 155 (300)
T ss_pred ECCCCCEEEEEcCC--CCeEEEEECCCCeEEeEeeCC-CCcceEEECCCCCEEEEEec-CCCeEEEEeCCCCeEEEEEEc
Confidence 99999988776543 279999999988877766532 34678999999999887432 2345777898 5555444432
Q ss_pred cCCCCceeEEEEccCCCeEEEEE-ecCcEEEEEcCCceeeeeeccc-ccccCCCccceeccCCCcccccceeeeccCccc
Q 014755 219 YESGLGVKSISWSPCGQFLAVGS-YDQTLRVLNHLTWKTFAEFMHL-STVRGPCFPAVFKEVDEPLQLDMSELCLNDDFI 296 (419)
Q Consensus 219 ~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (419)
. . .+..++|+|+++++++++ .++.|++||+++++.+..+... ....
T Consensus 156 ~-~--~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~----------------------------- 203 (300)
T TIGR03866 156 D-Q--RPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVH----------------------------- 203 (300)
T ss_pred C-C--CccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccc-----------------------------
Confidence 2 2 467899999999886554 5899999999998876665311 0000
Q ss_pred cccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEe-cCCCCceEEEeeccCCCceeeccc
Q 014755 297 QGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTR-NDSMPTTLWIWDICRQEPAAILVQ 375 (419)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~-~~d~~~~i~iwd~~~~~~~~~~~~ 375 (419)
........++|+|++++++++ ..+ +.+.+||++++++.....+
T Consensus 204 ----------------------------------~~~~~~~~i~~s~dg~~~~~~~~~~--~~i~v~d~~~~~~~~~~~~ 247 (300)
T TIGR03866 204 ----------------------------------PEAVQPVGIKLTKDGKTAFVALGPA--NRVAVVDAKTYEVLDYLLV 247 (300)
T ss_pred ----------------------------------cccCCccceEECCCCCEEEEEcCCC--CeEEEEECCCCcEEEEEEe
Confidence 000112458899999986554 344 7899999999888766666
Q ss_pred CCCeeEEEeCCCCCeEEEE-eCCCcEEEeecCCCeEE
Q 014755 376 KDPIRAATWDPTCTRLVLC-TGSSHLYMWTPSGAYCV 411 (419)
Q Consensus 376 ~~~v~~~~~s~~~~~l~s~-~~dg~i~vw~~~~~~~~ 411 (419)
...+.+++|+|+|++|+++ +.++.|++||+.+++++
T Consensus 248 ~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~ 284 (300)
T TIGR03866 248 GQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVI 284 (300)
T ss_pred CCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEE
Confidence 6789999999999998876 46899999999988863
No 94
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.97 E-value=5.6e-29 Score=214.67 Aligned_cols=209 Identities=16% Similarity=0.172 Sum_probs=146.8
Q ss_pred cceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEcc---CCCeEEEEEecCcEEEEEcCC
Q 014755 178 LDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSP---CGQFLAVGSYDQTLRVLNHLT 253 (419)
Q Consensus 178 ~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~~~~~d~~i~v~d~~~ 253 (419)
..+++++.+|+|++|+. +...|++++|++ +-+.+..+..|+. .|.|+.|+. ..++||+++.|.-|.|||+..
T Consensus 460 ~G~R~~~vSp~gqhLAs--GDr~GnlrVy~Lq~l~~~~~~eAHes--EilcLeyS~p~~~~kLLASasrdRlIHV~Dv~r 535 (1080)
T KOG1408|consen 460 FGFRALAVSPDGQHLAS--GDRGGNLRVYDLQELEYTCFMEAHES--EILCLEYSFPVLTNKLLASASRDRLIHVYDVKR 535 (1080)
T ss_pred cceEEEEECCCcceecc--cCccCceEEEEehhhhhhhheecccc--eeEEEeecCchhhhHhhhhccCCceEEEEeccc
Confidence 35899999999999998 666799999999 6666677777776 899999985 347899999999999999864
Q ss_pred -ceeeeeec-ccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCC
Q 014755 254 -WKTFAEFM-HLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPN 331 (419)
Q Consensus 254 -~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (419)
..++.++. |...+++ +.|.. .|.....+...++. . ..+............. .....-
T Consensus 536 ny~l~qtld~HSssITs----vKFa~----~gln~~MiscGADk-s-----------imFr~~qk~~~g~~f~-r~t~t~ 594 (1080)
T KOG1408|consen 536 NYDLVQTLDGHSSSITS----VKFAC----NGLNRKMISCGADK-S-----------IMFRVNQKASSGRLFP-RHTQTL 594 (1080)
T ss_pred ccchhhhhcccccceeE----EEEee----cCCceEEEeccCch-h-----------hheehhccccCceecc-cccccc
Confidence 34555665 6655532 33331 11111111111110 0 0111111100000000 000111
Q ss_pred CCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec----ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCC
Q 014755 332 PKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL----VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSG 407 (419)
Q Consensus 332 ~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~----~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 407 (419)
....+.+++..|..+++++++.| ..|+||++++++....+ +|.+..-.+...|.|.+||+.+.|.++.++|..+
T Consensus 595 ~ktTlYDm~Vdp~~k~v~t~cQD--rnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~s 672 (1080)
T KOG1408|consen 595 SKTTLYDMAVDPTSKLVVTVCQD--RNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVS 672 (1080)
T ss_pred ccceEEEeeeCCCcceEEEEecc--cceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEecc
Confidence 33568899999999999999999 99999999999988777 3677888999999999999999999999999999
Q ss_pred CeEEec
Q 014755 408 AYCVSN 413 (419)
Q Consensus 408 ~~~~~~ 413 (419)
|+++..
T Consensus 673 gEcvA~ 678 (1080)
T KOG1408|consen 673 GECVAQ 678 (1080)
T ss_pred chhhhh
Confidence 998754
No 95
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.97 E-value=1.1e-29 Score=197.93 Aligned_cols=276 Identities=12% Similarity=0.200 Sum_probs=223.3
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCC------------Cc------EEE-EeecCcceeEEEEecCCCeEEEEeccCCeE
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHS------------FK------VVQ-LFSCLDKISYIEWALDSEYILCGLYKRLMI 72 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~------------~~------~~~-~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i 72 (419)
.+|||||.++|+|+ |-.|+|+|++. +. +++ ++.|.++|+++.|+|....|++++.| ++|
T Consensus 118 aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ILiS~srD-~tv 196 (430)
T KOG0640|consen 118 AAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETILISGSRD-NTV 196 (430)
T ss_pred eeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhheEEeccCC-CeE
Confidence 57999999999999 88899999871 11 222 45699999999999999999999977 799
Q ss_pred EEEEccCCcceee--eecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE----eccCCCCeeeEEEccCCCE
Q 014755 73 QAWSLTQPEWTCK--IDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH----VQSPKHASKGVAFTQDGKF 146 (419)
Q Consensus 73 ~iw~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 146 (419)
++||.......+. ......+|.++.|+|.|.+|+++.+.. .+++||+++-++.. -..|...|+++.+++.+++
T Consensus 197 KlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp-~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~l 275 (430)
T KOG0640|consen 197 KLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHP-TLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSL 275 (430)
T ss_pred EEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCC-ceeEEeccceeEeeecCcccccccceeEEEecCCccE
Confidence 9999986543322 234556899999999999999998776 99999999988765 3456778899999999999
Q ss_pred EEEEeecCCCCeEEEEeccCCeEEEEEec-cc-cceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCC-
Q 014755 147 AAICTRRDCKDYINLLSCHTWEIMGVFAV-DT-LDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESG- 222 (419)
Q Consensus 147 l~~~~~~~~~g~v~i~d~~~~~~~~~~~~-~~-~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~- 222 (419)
.++++.| |.|++||--+++++..+.. |. ..|.+..|..++++++. .+.|..+++|.+ +|+.+..+.+....
T Consensus 276 YvTaSkD---G~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLs--SG~DS~vkLWEi~t~R~l~~YtGAg~tg 350 (430)
T KOG0640|consen 276 YVTASKD---GAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILS--SGKDSTVKLWEISTGRMLKEYTGAGTTG 350 (430)
T ss_pred EEEeccC---CcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEee--cCCcceeeeeeecCCceEEEEecCCccc
Confidence 9999998 8999999988888877643 33 56899999999999998 788999999999 99999988765321
Q ss_pred --CceeEEEEccCCCeEEEEEe-cCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCcccccc
Q 014755 223 --LGVKSISWSPCGQFLAVGSY-DQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGN 299 (419)
Q Consensus 223 --~~v~~~~~s~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (419)
.--+...|+....|++.-.+ .+.+.-||.++...+..+.
T Consensus 351 rq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~s-------------------------------------- 392 (430)
T KOG0640|consen 351 RQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLS-------------------------------------- 392 (430)
T ss_pred chhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcc--------------------------------------
Confidence 12345667777778777654 4678899988765443321
Q ss_pred ccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeecc
Q 014755 300 SDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDIC 365 (419)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~ 365 (419)
-+|.+.+..+.-||.+.-+++++.| ..+++|--+
T Consensus 393 ------------------------------lgHn~a~R~i~HSP~~p~FmTcsdD--~raRFWyrr 426 (430)
T KOG0640|consen 393 ------------------------------LGHNGAVRWIVHSPVEPAFMTCSDD--FRARFWYRR 426 (430)
T ss_pred ------------------------------cCCCCCceEEEeCCCCCceeeeccc--ceeeeeeec
Confidence 1588889999999999999999999 999999643
No 96
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=2.3e-29 Score=190.72 Aligned_cols=278 Identities=17% Similarity=0.226 Sum_probs=214.0
Q ss_pred ccccCeEEcC-CCCEEEEE--------eCCeEEEEecCCCcEEE---EeecCcceeEEEEecCC-CeEEEEeccCCeEEE
Q 014755 8 KQTGPSCFSP-NARYIAVA--------VDYRLVVRDAHSFKVVQ---LFSCLDKISYIEWALDS-EYILCGLYKRLMIQA 74 (419)
Q Consensus 8 ~~~~~~~~s~-d~~~la~~--------~~~~i~i~~~~~~~~~~---~~~~~~~v~~~~~s~~~-~~l~~~~~~~g~i~i 74 (419)
.|.-.+.||| -.++||++ +.|++.|.++...+-+. .+.-.+.+..++|+++. ..+++++.| |+++|
T Consensus 9 f~GysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GD-GSLrl 87 (311)
T KOG0277|consen 9 FHGYSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGD-GSLRL 87 (311)
T ss_pred cccceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecC-ceEEE
Confidence 3444599999 23444443 25779999986444333 34467889999999964 455566656 99999
Q ss_pred EEccCC-cceeeeecCCccEeEEEECCC-CCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCC-CEEEEE
Q 014755 75 WSLTQP-EWTCKIDEGLAGIAYARWSPD-SRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDG-KFAAIC 150 (419)
Q Consensus 75 w~~~~~-~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~-~~l~~~ 150 (419)
||+... .++..+++|..+|.++.|++- ++.+++++-|+ +|++|+...++.+. +.+|..-|....|+|.- +.++++
T Consensus 88 ~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~-TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~ 166 (311)
T KOG0277|consen 88 FDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDG-TIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASA 166 (311)
T ss_pred eccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCC-ceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEc
Confidence 997533 567778999999999999994 45566667776 99999999887777 88999999999999965 778888
Q ss_pred eecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC--CCceEEEEeecCCCCceeEE
Q 014755 151 TRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP--DGRCLLKYQAYESGLGVKSI 228 (419)
Q Consensus 151 ~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~--~~~~~~~~~~~~~~~~v~~~ 228 (419)
+.| +++++||++.......+..|...+.++.|+.-...+++. ++.|+.|+.||+ -..++..+.+|.- .|..+
T Consensus 167 Sgd---~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~T-g~vd~~vr~wDir~~r~pl~eL~gh~~--AVRkv 240 (311)
T KOG0277|consen 167 SGD---GTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLAT-GGVDNLVRGWDIRNLRTPLFELNGHGL--AVRKV 240 (311)
T ss_pred cCC---ceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEe-cCCCceEEEEehhhccccceeecCCce--EEEEE
Confidence 876 899999998854444588999999999999876665543 677999999999 3455666655554 89999
Q ss_pred EEccCC-CeEEEEEecCcEEEEEcCCcee-eeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCc
Q 014755 229 SWSPCG-QFLAVGSYDQTLRVLNHLTWKT-FAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGH 306 (419)
Q Consensus 229 ~~s~~~-~~l~~~~~d~~i~v~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (419)
.|||.. ..||+++.|-++++||...+.. +.+..
T Consensus 241 k~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~--------------------------------------------- 275 (311)
T KOG0277|consen 241 KFSPHHASLLASASYDMTVRIWDPERQDSAIETVD--------------------------------------------- 275 (311)
T ss_pred ecCcchhhHhhhccccceEEecccccchhhhhhhh---------------------------------------------
Confidence 999965 5899999999999999874332 22221
Q ss_pred eEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEcc-CCeEEEEecCCCCceEEEeec
Q 014755 307 IKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSS-DSQYICTRNDSMPTTLWIWDI 364 (419)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~d~~~~i~iwd~ 364 (419)
.|...+..+.||+ ++.++|+.+.| ..++||+.
T Consensus 276 ------------------------~HtEFv~g~Dws~~~~~~vAs~gWD--e~l~Vw~p 308 (311)
T KOG0277|consen 276 ------------------------HHTEFVCGLDWSLFDPGQVASTGWD--ELLYVWNP 308 (311)
T ss_pred ------------------------ccceEEeccccccccCceeeecccc--cceeeecc
Confidence 2666778888887 57789999999 99999984
No 97
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=9.1e-30 Score=223.76 Aligned_cols=237 Identities=17% Similarity=0.290 Sum_probs=197.7
Q ss_pred ccccC---eEEcCCCCEEEEEe-CCeEEEEecCC--------------------------------Cc------------
Q 014755 8 KQTGP---SCFSPNARYIAVAV-DYRLVVRDAHS--------------------------------FK------------ 39 (419)
Q Consensus 8 ~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~--------------------------------~~------------ 39 (419)
.|.++ +.||+||+|||+|+ |+.|+||.+.. ..
T Consensus 265 ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~ 344 (712)
T KOG0283|consen 265 AHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQ 344 (712)
T ss_pred ccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccC
Confidence 56666 78999999999999 88899998654 00
Q ss_pred ----------------EEE-EeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECC-C
Q 014755 40 ----------------VVQ-LFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSP-D 101 (419)
Q Consensus 40 ----------------~~~-~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~ 101 (419)
++. ..+|.+.|..+.||.++ +|++++.| .+|+||++...+++..+ .|.+-|+|++|+| |
T Consensus 345 s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~-fLLSSSMD-KTVRLWh~~~~~CL~~F-~HndfVTcVaFnPvD 421 (712)
T KOG0283|consen 345 SPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN-FLLSSSMD-KTVRLWHPGRKECLKVF-SHNDFVTCVAFNPVD 421 (712)
T ss_pred CccccCCCccccccccchhhhhccchhheecccccCC-eeEecccc-ccEEeecCCCcceeeEE-ecCCeeEEEEecccC
Confidence 001 23588899999999765 88888888 59999999998888766 7999999999999 8
Q ss_pred CCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEecc-----
Q 014755 102 SRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVD----- 176 (419)
Q Consensus 102 ~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~----- 176 (419)
.+++++|+-|+ .|+||++...+.........-|++++|.|||++.++|+.+ |.+++|+....+.......+
T Consensus 422 DryFiSGSLD~-KvRiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~---G~C~fY~t~~lk~~~~~~I~~~~~K 497 (712)
T KOG0283|consen 422 DRYFISGSLDG-KVRLWSISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFN---GYCRFYDTEGLKLVSDFHIRLHNKK 497 (712)
T ss_pred CCcEeeccccc-ceEEeecCcCeeEeehhhhhhheeEEeccCCceEEEEEec---cEEEEEEccCCeEEEeeeEeeccCc
Confidence 89999999998 9999999999988877777889999999999999999997 89999999887766554321
Q ss_pred ---ccceeeeeECCCCC-eEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEc
Q 014755 177 ---TLDLADIEWSPDDS-AIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNH 251 (419)
Q Consensus 177 ---~~~v~~~~~~~~~~-~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~ 251 (419)
...|+.+.|.|... .+++ .+.|..|+|||. +..++..+.+......-....|+.||++|+++++|..|++|+.
T Consensus 498 k~~~~rITG~Q~~p~~~~~vLV--TSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~ 575 (712)
T KOG0283|consen 498 KKQGKRITGLQFFPGDPDEVLV--TSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKN 575 (712)
T ss_pred cccCceeeeeEecCCCCCeEEE--ecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeC
Confidence 23699999997654 3555 467999999999 7788888887766556678899999999999999999999997
Q ss_pred CC
Q 014755 252 LT 253 (419)
Q Consensus 252 ~~ 253 (419)
..
T Consensus 576 ~~ 577 (712)
T KOG0283|consen 576 DS 577 (712)
T ss_pred CC
Confidence 54
No 98
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.97 E-value=1.1e-28 Score=219.41 Aligned_cols=267 Identities=12% Similarity=0.193 Sum_probs=225.3
Q ss_pred CCEEEEEe-CCeEEEEecCCCcEEEE--eecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeE
Q 014755 19 ARYIAVAV-DYRLVVRDAHSFKVVQL--FSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAY 95 (419)
Q Consensus 19 ~~~la~~~-~~~i~i~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~ 95 (419)
..++++++ +.+|.+||..++..+.. .+|.+.|.++++..-+.+|++|+.| .++++||..+|++...+.+|...+.+
T Consensus 218 ~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D-~t~rvWd~~sg~C~~~l~gh~stv~~ 296 (537)
T KOG0274|consen 218 DGFFKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTD-KTERVWDCSTGECTHSLQGHTSSVRC 296 (537)
T ss_pred cCeEEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecC-CcEEeEecCCCcEEEEecCCCceEEE
Confidence 45667776 78899999999887765 4699999999999878899999987 69999999999999999999999999
Q ss_pred EEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEe
Q 014755 96 ARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFA 174 (419)
Q Consensus 96 ~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~ 174 (419)
+... ...+++++.|. +|++|+++++..+. +.+|...|.++..+ +.++++++.| +.|++||+.+++++..+.
T Consensus 297 ~~~~--~~~~~sgs~D~-tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d---~~v~VW~~~~~~cl~sl~ 368 (537)
T KOG0274|consen 297 LTID--PFLLVSGSRDN-TVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYD---GTVKVWDPRTGKCLKSLS 368 (537)
T ss_pred EEcc--CceEeeccCCc-eEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecC---ceEEEEEhhhceeeeeec
Confidence 8764 44677778887 99999999999999 55599999999998 7899999997 799999999999999999
Q ss_pred ccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CC-ceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcC
Q 014755 175 VDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DG-RCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHL 252 (419)
Q Consensus 175 ~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~ 252 (419)
+|...|.++.+.+. ..++. ++.|+.|++||+ +. +++..+..|.. -+..+.+ .+++|++++.|++|++||.+
T Consensus 369 gH~~~V~sl~~~~~-~~~~S--gs~D~~IkvWdl~~~~~c~~tl~~h~~--~v~~l~~--~~~~Lvs~~aD~~Ik~WD~~ 441 (537)
T KOG0274|consen 369 GHTGRVYSLIVDSE-NRLLS--GSLDTTIKVWDLRTKRKCIHTLQGHTS--LVSSLLL--RDNFLVSSSADGTIKLWDAE 441 (537)
T ss_pred CCcceEEEEEecCc-ceEEe--eeeccceEeecCCchhhhhhhhcCCcc--ccccccc--ccceeEeccccccEEEeecc
Confidence 99999999988765 56666 778999999999 55 68888887766 5555444 67799999999999999999
Q ss_pred CceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCC
Q 014755 253 TWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNP 332 (419)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (419)
++++++.+... |
T Consensus 442 ~~~~~~~~~~~--------------------------------------------------------------------~ 453 (537)
T KOG0274|consen 442 EGECLRTLEGR--------------------------------------------------------------------H 453 (537)
T ss_pred cCceeeeeccC--------------------------------------------------------------------C
Confidence 99999887621 3
Q ss_pred CcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec
Q 014755 333 KQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL 373 (419)
Q Consensus 333 ~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~ 373 (419)
...|..+++. ...+++++.+ +.+++||++++++...+
T Consensus 454 ~~~v~~l~~~--~~~il~s~~~--~~~~l~dl~~~~~~~~l 490 (537)
T KOG0274|consen 454 VGGVSALALG--KEEILCSSDD--GSVKLWDLRSGTLIRTL 490 (537)
T ss_pred cccEEEeecC--cceEEEEecC--CeeEEEecccCchhhhh
Confidence 3446777766 4567777777 99999999999887655
No 99
>PTZ00420 coronin; Provisional
Probab=99.97 E-value=6.6e-28 Score=215.12 Aligned_cols=236 Identities=13% Similarity=0.137 Sum_probs=179.6
Q ss_pred EcCCCCEEEEEe-------CCeEEEEecCCCcEEEEe-ecCcceeEEEEecC-CCeEEEEeccCCeEEEEEccCCc----
Q 014755 15 FSPNARYIAVAV-------DYRLVVRDAHSFKVVQLF-SCLDKISYIEWALD-SEYILCGLYKRLMIQAWSLTQPE---- 81 (419)
Q Consensus 15 ~s~d~~~la~~~-------~~~i~i~~~~~~~~~~~~-~~~~~v~~~~~s~~-~~~l~~~~~~~g~i~iw~~~~~~---- 81 (419)
+..+++++|... .+.|.+|+......+..+ +|.+.|.+++|+|+ +.+|++++.| |+|+|||+.++.
T Consensus 34 ia~n~~~~A~~w~~~gGG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~D-gtIrIWDi~t~~~~~~ 112 (568)
T PTZ00420 34 IACSSGFVAVPWEVEGGGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSED-LTIRVWEIPHNDESVK 112 (568)
T ss_pred EeeCCCeEEEEEEcCCCCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCC-CeEEEEECCCCCcccc
Confidence 444566766632 345889988766655544 59999999999997 7899999876 899999997642
Q ss_pred ----ceeeeecCCccEeEEEECCCCCEE-EEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCC
Q 014755 82 ----WTCKIDEGLAGIAYARWSPDSRHI-LTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCK 156 (419)
Q Consensus 82 ----~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 156 (419)
.+..+.+|...|.+++|+|++..+ ++++.|+ .|++||+++++......+...+.+++|+|+|.+|++++.|
T Consensus 113 ~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~Dg-tIrIWDl~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D--- 188 (568)
T PTZ00420 113 EIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDS-FVNIWDIENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVG--- 188 (568)
T ss_pred ccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCC-eEEEEECCCCcEEEEEecCCcEEEEEECCCCCEEEEEecC---
Confidence 234567899999999999998875 5677777 9999999998866633356789999999999999998876
Q ss_pred CeEEEEeccCCeEEEEEeccccceee-----eeECCCCCeEEEEcCC--CCceEEEEcCC--CceEEEEeecCCCCceeE
Q 014755 157 DYINLLSCHTWEIMGVFAVDTLDLAD-----IEWSPDDSAIVIWDSP--LEYKVLIYSPD--GRCLLKYQAYESGLGVKS 227 (419)
Q Consensus 157 g~v~i~d~~~~~~~~~~~~~~~~v~~-----~~~~~~~~~l~~~~~~--~~~~i~~~d~~--~~~~~~~~~~~~~~~v~~ 227 (419)
+.|++||+++++.+..+..|.+.+.. ..|++++.++++.... .++.|++||+. ++.+..+..+.....+..
T Consensus 189 ~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p 268 (568)
T PTZ00420 189 KHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIP 268 (568)
T ss_pred CEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEE
Confidence 79999999999999999988765433 3456888888874322 23589999993 566666554444333444
Q ss_pred EEEccCCCeEEEEEecCcEEEEEcCCce
Q 014755 228 ISWSPCGQFLAVGSYDQTLRVLNHLTWK 255 (419)
Q Consensus 228 ~~~s~~~~~l~~~~~d~~i~v~d~~~~~ 255 (419)
....++|.++++|+.|+.|++|++..+.
T Consensus 269 ~~D~~tg~l~lsGkGD~tIr~~e~~~~~ 296 (568)
T PTZ00420 269 HYDESTGLIYLIGKGDGNCRYYQHSLGS 296 (568)
T ss_pred eeeCCCCCEEEEEECCCeEEEEEccCCc
Confidence 4445568899999999999999997653
No 100
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=2.3e-28 Score=191.02 Aligned_cols=255 Identities=14% Similarity=0.219 Sum_probs=205.1
Q ss_pred ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCC--EEEEEecCCCeEEEEEcCC
Q 014755 45 SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSR--HILTTSDFQLRLTVWSLLN 122 (419)
Q Consensus 45 ~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~~~~~i~iwd~~~ 122 (419)
.|.++|++++.+ ++++|+|+.|+ +|+|||+........+..|.+.|+++.|.+.-. .|+++++|+ .|.+|+...
T Consensus 41 aH~~sitavAVs--~~~~aSGssDe-tI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG-~i~iw~~~~ 116 (362)
T KOG0294|consen 41 AHAGSITALAVS--GPYVASGSSDE-TIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDG-HIIIWRVGS 116 (362)
T ss_pred ccccceeEEEec--ceeEeccCCCC-cEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCC-cEEEEEcCC
Confidence 388999999987 89999999985 999999999999999999999999999999765 899999988 999999999
Q ss_pred CeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCc
Q 014755 123 TACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEY 201 (419)
Q Consensus 123 ~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~ 201 (419)
-+.+. +..|...|+.++++|.+++.++.+.| +.+++||+-+|+.-..+... .....+.|+|.|.++++ ....
T Consensus 117 W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D---~~lr~WNLV~Gr~a~v~~L~-~~at~v~w~~~Gd~F~v---~~~~ 189 (362)
T KOG0294|consen 117 WELLKSLKAHKGQVTDLSIHPSGKLALSVGGD---QVLRTWNLVRGRVAFVLNLK-NKATLVSWSPQGDHFVV---SGRN 189 (362)
T ss_pred eEEeeeecccccccceeEecCCCceEEEEcCC---ceeeeehhhcCccceeeccC-CcceeeEEcCCCCEEEE---Eecc
Confidence 88877 89999999999999999998888887 89999999988766555443 23345999999998887 2357
Q ss_pred eEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCC
Q 014755 202 KVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDE 280 (419)
Q Consensus 202 ~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (419)
.|-+|.+ +......+... ..+.++.|. ++..|++|+.|+.|++||..+..+...+.
T Consensus 190 ~i~i~q~d~A~v~~~i~~~---~r~l~~~~l-~~~~L~vG~d~~~i~~~D~ds~~~~~~~~------------------- 246 (362)
T KOG0294|consen 190 KIDIYQLDNASVFREIENP---KRILCATFL-DGSELLVGGDNEWISLKDTDSDTPLTEFL------------------- 246 (362)
T ss_pred EEEEEecccHhHhhhhhcc---ccceeeeec-CCceEEEecCCceEEEeccCCCccceeee-------------------
Confidence 8889988 44444444332 247777775 45689999999999999988766665543
Q ss_pred cccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEE--ccCCeEEEEecCCCCce
Q 014755 281 PLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSW--SSDSQYICTRNDSMPTT 358 (419)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--s~~g~~l~~~~~d~~~~ 358 (419)
+|...|.++.+ .|++.+|++++.| |.
T Consensus 247 --------------------------------------------------AH~~RVK~i~~~~~~~~~~lvTaSSD--G~ 274 (362)
T KOG0294|consen 247 --------------------------------------------------AHENRVKDIASYTNPEHEYLVTASSD--GF 274 (362)
T ss_pred --------------------------------------------------cchhheeeeEEEecCCceEEEEeccC--ce
Confidence 46666777774 5788999999999 99
Q ss_pred EEEeeccCC-----CceeecccCCCeeEEEeC
Q 014755 359 LWIWDICRQ-----EPAAILVQKDPIRAATWD 385 (419)
Q Consensus 359 i~iwd~~~~-----~~~~~~~~~~~v~~~~~s 385 (419)
|++||++.. +++..+....+++|+...
T Consensus 275 I~vWd~~~~~k~~~~~l~e~n~~~RltCl~~~ 306 (362)
T KOG0294|consen 275 IKVWDIDMETKKRPTLLAELNTNVRLTCLRVK 306 (362)
T ss_pred EEEEEccccccCCcceeEEeecCCccceeeeh
Confidence 999999875 334444455667776553
No 101
>PTZ00420 coronin; Provisional
Probab=99.97 E-value=5.9e-28 Score=215.40 Aligned_cols=244 Identities=8% Similarity=0.063 Sum_probs=189.1
Q ss_pred CeEEEEEccCCcceeeeecCCccEeEEEECCC-CCEEEEEecCCCeEEEEEcCCCe--------EE-EeccCCCCeeeEE
Q 014755 70 LMIQAWSLTQPEWTCKIDEGLAGIAYARWSPD-SRHILTTSDFQLRLTVWSLLNTA--------CV-HVQSPKHASKGVA 139 (419)
Q Consensus 70 g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~~i~iwd~~~~~--------~~-~~~~~~~~~~~~~ 139 (419)
+.|++|+......+..+.+|...|.+++|+|+ +..|++++.|+ .|++||+.++. +. .+..|...|.+++
T Consensus 54 gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~Dg-tIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVa 132 (568)
T PTZ00420 54 GAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDL-TIRVWEIPHNDESVKEIKDPQCILKGHKKKISIID 132 (568)
T ss_pred eEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCC-eEEEEECCCCCccccccccceEEeecCCCcEEEEE
Confidence 78999998877777888999999999999996 78999999988 99999998642 12 2677888999999
Q ss_pred EccCCCEE-EEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEe
Q 014755 140 FTQDGKFA-AICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQ 217 (419)
Q Consensus 140 ~~~~~~~l-~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~ 217 (419)
|+|++..+ ++++.| +.|++||+++++.+..+. +...|.+++|+|+|..+++ ++.|+.|++||+ +++.+..+.
T Consensus 133 f~P~g~~iLaSgS~D---gtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat--~s~D~~IrIwD~Rsg~~i~tl~ 206 (568)
T PTZ00420 133 WNPMNYYIMCSSGFD---SFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSG--TCVGKHMHIIDPRKQEIASSFH 206 (568)
T ss_pred ECCCCCeEEEEEeCC---CeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEE--EecCCEEEEEECCCCcEEEEEe
Confidence 99998765 577766 899999999988777665 4578999999999999987 567899999999 888888888
Q ss_pred ecCCCC---ceeEEEEccCCCeEEEEEecC----cEEEEEcCC-ceeeeeecccccccCCCccceeccCCCcccccceee
Q 014755 218 AYESGL---GVKSISWSPCGQFLAVGSYDQ----TLRVLNHLT-WKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSEL 289 (419)
Q Consensus 218 ~~~~~~---~v~~~~~s~~~~~l~~~~~d~----~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (419)
.|.... .+....|++++++|++++.|+ +|+|||++. .+++..+.+.
T Consensus 207 gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld-------------------------- 260 (568)
T PTZ00420 207 IHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSID-------------------------- 260 (568)
T ss_pred cccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEec--------------------------
Confidence 776521 122334568999999988774 799999985 4444433211
Q ss_pred eccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCc
Q 014755 290 CLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEP 369 (419)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~ 369 (419)
.+.+.+......++|.++++|..| +.|++|++..+.+
T Consensus 261 -----------------------------------------~~~~~L~p~~D~~tg~l~lsGkGD--~tIr~~e~~~~~~ 297 (568)
T PTZ00420 261 -----------------------------------------NASAPLIPHYDESTGLIYLIGKGD--GNCRYYQHSLGSI 297 (568)
T ss_pred -----------------------------------------CCccceEEeeeCCCCCEEEEEECC--CeEEEEEccCCcE
Confidence 122223333445679999999998 9999999988765
Q ss_pred eeec--ccCCCeeEEEeCCCCC
Q 014755 370 AAIL--VQKDPIRAATWDPTCT 389 (419)
Q Consensus 370 ~~~~--~~~~~v~~~~~s~~~~ 389 (419)
..+. .+..++.+++|.|+..
T Consensus 298 ~~l~~~~s~~p~~g~~f~Pkr~ 319 (568)
T PTZ00420 298 RKVNEYKSCSPFRSFGFLPKQI 319 (568)
T ss_pred EeecccccCCCccceEEccccc
Confidence 4433 3677899999999764
No 102
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.97 E-value=1.2e-28 Score=192.82 Aligned_cols=282 Identities=17% Similarity=0.197 Sum_probs=212.5
Q ss_pred hhhhcccccC---eEEcCCCCEEEEEe-CCeEEEEecCCCcEE-----EEeecCcceeEEEEecCCCeEEEEeccCCeEE
Q 014755 3 FTEAYKQTGP---SCFSPNARYIAVAV-DYRLVVRDAHSFKVV-----QLFSCLDKISYIEWALDSEYILCGLYKRLMIQ 73 (419)
Q Consensus 3 ~~~~~~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~~~~-----~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~ 73 (419)
...+.+|... ++||.||++||+++ |+.|+||++...+.. +..-.-+..+.++|+||-+.+++......+++
T Consensus 79 ~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~ 158 (420)
T KOG2096|consen 79 VSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLC 158 (420)
T ss_pred hhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEE
Confidence 3456677666 89999999999998 888999999864322 11112345688999999998888776656999
Q ss_pred EEEccCC---cceee---------eecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEE
Q 014755 74 AWSLTQP---EWTCK---------IDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAF 140 (419)
Q Consensus 74 iw~~~~~---~~~~~---------~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~ 140 (419)
+|.+... ..... -..|...+..+-...++++|++++.+. .|.+|+++ |+.+. +.......+..+.
T Consensus 159 vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt-~i~lw~lk-Gq~L~~idtnq~~n~~aav 236 (420)
T KOG2096|consen 159 VYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDT-KICLWDLK-GQLLQSIDTNQSSNYDAAV 236 (420)
T ss_pred EEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCC-cEEEEecC-Cceeeeeccccccccceee
Confidence 9987532 21111 123455677788888999999999988 99999999 55554 6666666788999
Q ss_pred ccCCCEEEEEeecCCCCeEEEEeccC---C-----eEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCC---
Q 014755 141 TQDGKFAAICTRRDCKDYINLLSCHT---W-----EIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPD--- 209 (419)
Q Consensus 141 ~~~~~~l~~~~~~~~~g~v~i~d~~~---~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~--- 209 (419)
||+|+++++++.. -.|++|.+-- | ..+..+.+|...|..++|+++.+.+++ .+.||++++||.+
T Consensus 237 SP~GRFia~~gFT---pDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vt--vSkDG~wriwdtdVrY 311 (420)
T KOG2096|consen 237 SPDGRFIAVSGFT---PDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVT--VSKDGKWRIWDTDVRY 311 (420)
T ss_pred CCCCcEEEEecCC---CCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEE--EecCCcEEEeeccceE
Confidence 9999999999875 5799998732 2 234568899999999999999999998 7789999999972
Q ss_pred --C---ceEEEEe--ecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcc
Q 014755 210 --G---RCLLKYQ--AYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPL 282 (419)
Q Consensus 210 --~---~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (419)
+ +.++... .+........++++|.|+.||.+.. ..+++|..++++....++
T Consensus 312 ~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~g-s~l~~~~se~g~~~~~~e--------------------- 369 (420)
T KOG2096|consen 312 EAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFG-SDLKVFASEDGKDYPELE--------------------- 369 (420)
T ss_pred ecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecC-CceEEEEcccCccchhHH---------------------
Confidence 1 1222221 1222234558999999998887664 489999998887666554
Q ss_pred cccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEe
Q 014755 283 QLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIW 362 (419)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iw 362 (419)
..|...|.+++|+++|+++|++++ ..++++
T Consensus 370 -----------------------------------------------~~h~~~Is~is~~~~g~~~atcGd---r~vrv~ 399 (420)
T KOG2096|consen 370 -----------------------------------------------DIHSTTISSISYSSDGKYIATCGD---RYVRVI 399 (420)
T ss_pred -----------------------------------------------HhhcCceeeEEecCCCcEEeeecc---eeeeee
Confidence 137777999999999999999987 788887
Q ss_pred e
Q 014755 363 D 363 (419)
Q Consensus 363 d 363 (419)
.
T Consensus 400 ~ 400 (420)
T KOG2096|consen 400 R 400 (420)
T ss_pred c
Confidence 6
No 103
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.97 E-value=6.1e-27 Score=200.87 Aligned_cols=233 Identities=12% Similarity=0.111 Sum_probs=192.9
Q ss_pred CeEEcCCCCEEEEEe-CCeEEEEecCCCcEEEE-e-e-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeee
Q 014755 12 PSCFSPNARYIAVAV-DYRLVVRDAHSFKVVQL-F-S-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKID 87 (419)
Q Consensus 12 ~~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~-~-~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~ 87 (419)
++|||.+.+.||.+- +|.|.||++..+-.... + + ....|.+++|++.++ |++.+.+ |.|.-||+.+++....+.
T Consensus 30 slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~~R-LFS~g~s-g~i~EwDl~~lk~~~~~d 107 (691)
T KOG2048|consen 30 SLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEGGR-LFSSGLS-GSITEWDLHTLKQKYNID 107 (691)
T ss_pred EEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEccCCe-EEeecCC-ceEEEEecccCceeEEec
Confidence 489999999999985 99999999998655442 2 2 456899999996554 5555556 899999999999998898
Q ss_pred cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE---eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEec
Q 014755 88 EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH---VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSC 164 (419)
Q Consensus 88 ~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~ 164 (419)
...+.|++++.+|.+..++.+++++ .+..++...++... +...+.++.+++|+|++..++.|+.| |.|++||.
T Consensus 108 ~~gg~IWsiai~p~~~~l~IgcddG-vl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~D---g~Iriwd~ 183 (691)
T KOG2048|consen 108 SNGGAIWSIAINPENTILAIGCDDG-VLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSID---GVIRIWDV 183 (691)
T ss_pred CCCcceeEEEeCCccceEEeecCCc-eEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccC---ceEEEEEc
Confidence 8889999999999999999999888 88888988887766 45556889999999999999999997 89999999
Q ss_pred cCCeEEEEEec--------cccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCC
Q 014755 165 HTWEIMGVFAV--------DTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQ 235 (419)
Q Consensus 165 ~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~ 235 (419)
.++..+..... ...-|.++.|-.++. |+. +.+.|.|.+||. .|.+++.+..|.. .|.+++..+++.
T Consensus 184 ~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~t-I~s--gDS~G~V~FWd~~~gTLiqS~~~h~a--dVl~Lav~~~~d 258 (691)
T KOG2048|consen 184 KSGQTLHIITMQLDRLSKREPTIVWSVLFLRDST-IAS--GDSAGTVTFWDSIFGTLIQSHSCHDA--DVLALAVADNED 258 (691)
T ss_pred CCCceEEEeeecccccccCCceEEEEEEEeecCc-EEE--ecCCceEEEEcccCcchhhhhhhhhc--ceeEEEEcCCCC
Confidence 99887763221 223477888876664 555 566799999999 8999998888777 799999999999
Q ss_pred eEEEEEecCcEEEEEcCCce
Q 014755 236 FLAVGSYDQTLRVLNHLTWK 255 (419)
Q Consensus 236 ~l~~~~~d~~i~v~d~~~~~ 255 (419)
++.+++.|+.|.-|...+.+
T Consensus 259 ~vfsaGvd~~ii~~~~~~~~ 278 (691)
T KOG2048|consen 259 RVFSAGVDPKIIQYSLTTNK 278 (691)
T ss_pred eEEEccCCCceEEEEecCCc
Confidence 99999999999888877653
No 104
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.97 E-value=8.8e-29 Score=192.17 Aligned_cols=241 Identities=15% Similarity=0.161 Sum_probs=185.4
Q ss_pred cccCeEEcC-CCCEEEEEe-CCeEEEEecCC-CcEEE--EeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcce
Q 014755 9 QTGPSCFSP-NARYIAVAV-DYRLVVRDAHS-FKVVQ--LFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWT 83 (419)
Q Consensus 9 ~~~~~~~s~-d~~~la~~~-~~~i~i~~~~~-~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~ 83 (419)
..+.++||| ...+++.+| |++|++|+++. +.... ...|.++|.+++|+.||..+++|+.| +.+++||+.+++ .
T Consensus 29 sIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~D-k~~k~wDL~S~Q-~ 106 (347)
T KOG0647|consen 29 SISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCD-KQAKLWDLASGQ-V 106 (347)
T ss_pred chheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccC-CceEEEEccCCC-e
Confidence 344499999 445555666 99999999986 34333 34589999999999999999999987 799999999995 5
Q ss_pred eeeecCCccEeEEEECCCCC--EEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEE
Q 014755 84 CKIDEGLAGIAYARWSPDSR--HILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINL 161 (419)
Q Consensus 84 ~~~~~~~~~v~~~~~~~~~~--~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i 161 (419)
.++..|.++|..+.|-+... .|++++-|+ +|+.||.+...++.....+.++.++..- ..+++++..+ +.|.+
T Consensus 107 ~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDK-TlKfWD~R~~~pv~t~~LPeRvYa~Dv~--~pm~vVata~---r~i~v 180 (347)
T KOG0647|consen 107 SQVAAHDAPVKTCHWVPGMNYQCLVTGSWDK-TLKFWDTRSSNPVATLQLPERVYAADVL--YPMAVVATAE---RHIAV 180 (347)
T ss_pred eeeeecccceeEEEEecCCCcceeEeccccc-ceeecccCCCCeeeeeeccceeeehhcc--CceeEEEecC---CcEEE
Confidence 57889999999999987655 789999998 9999999998888755566667666553 3466777665 78999
Q ss_pred EeccCCeEEEE--EeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CC--ceEEEEeecCC-------CCceeEEE
Q 014755 162 LSCHTWEIMGV--FAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DG--RCLLKYQAYES-------GLGVKSIS 229 (419)
Q Consensus 162 ~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~--~~~~~~~~~~~-------~~~v~~~~ 229 (419)
|+++.+..... ...-.-.+++++..+|....++ ++.+|.+.+..+ .+ +.-..+..|.. -..|++++
T Consensus 181 ynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~al--GsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~ 258 (347)
T KOG0647|consen 181 YNLENPPTEFKRIESPLKWQTRCVACFQDKDGFAL--GSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIA 258 (347)
T ss_pred EEcCCCcchhhhhcCcccceeeEEEEEecCCceEe--eeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceE
Confidence 99976433221 1223456889999998888888 777888888887 43 33445555542 23588899
Q ss_pred EccCCCeEEEEEecCcEEEEEcCCceeeee
Q 014755 230 WSPCGQFLAVGSYDQTLRVLNHLTWKTFAE 259 (419)
Q Consensus 230 ~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 259 (419)
|+|....|++++.||+..+||-.....+++
T Consensus 259 FhP~hgtlvTaGsDGtf~FWDkdar~kLk~ 288 (347)
T KOG0647|consen 259 FHPVHGTLVTAGSDGTFSFWDKDARTKLKT 288 (347)
T ss_pred eecccceEEEecCCceEEEecchhhhhhhc
Confidence 999999999999999999999776555544
No 105
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.97 E-value=1.2e-29 Score=210.11 Aligned_cols=282 Identities=15% Similarity=0.229 Sum_probs=233.9
Q ss_pred EEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC---cceeeee--cCCccEeEEEECCCCCEEEEEecCCCeE
Q 014755 41 VQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP---EWTCKID--EGLAGIAYARWSPDSRHILTTSDFQLRL 115 (419)
Q Consensus 41 ~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~---~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~~i 115 (419)
+.++.|.+-|.++..|...+++++|+. |.|+|||+... ..+..+. ...+-|.++...|||+.|++++... ++
T Consensus 413 ~~tL~HGEvVcAvtIS~~trhVyTgGk--gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeas-tl 489 (705)
T KOG0639|consen 413 INTLAHGEVVCAVTISNPTRHVYTGGK--GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEAS-TL 489 (705)
T ss_pred hhhhccCcEEEEEEecCCcceeEecCC--CeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccc-ee
Confidence 345678888999999999999999984 79999999744 2233332 2345689999999999999999976 99
Q ss_pred EEEEcCCCeEEE---eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeE
Q 014755 116 TVWSLLNTACVH---VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAI 192 (419)
Q Consensus 116 ~iwd~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 192 (419)
.|||+....+.. +....-...+++.+||.+..+++..| |.|.|||+.+...++.+++|...+.|+.+++||..|
T Consensus 490 siWDLAapTprikaeltssapaCyALa~spDakvcFsccsd---GnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtkl 566 (705)
T KOG0639|consen 490 SIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSD---GNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKL 566 (705)
T ss_pred eeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccC---CcEEEEEcccceeeecccCCCCCceeEEecCCCcee
Confidence 999999865543 33333445889999999998888887 899999999999999999999999999999999988
Q ss_pred EEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCc
Q 014755 193 VIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCF 271 (419)
Q Consensus 193 ~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~ 271 (419)
.+ ++-|++|+.||+ +++.+.... -...|.++..+|++.+++.|=.++.+.|......+.. .
T Consensus 567 WT--GGlDntvRcWDlregrqlqqhd---F~SQIfSLg~cP~~dWlavGMens~vevlh~skp~ky-q------------ 628 (705)
T KOG0639|consen 567 WT--GGLDNTVRCWDLREGRQLQQHD---FSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKY-Q------------ 628 (705)
T ss_pred ec--CCCccceeehhhhhhhhhhhhh---hhhhheecccCCCccceeeecccCcEEEEecCCccce-e------------
Confidence 77 888999999999 776655443 3336999999999999999999988888765432211 1
Q ss_pred cceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEe
Q 014755 272 PAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTR 351 (419)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 351 (419)
+.-|...|.++.|++.|+++++.
T Consensus 629 ---------------------------------------------------------lhlheScVLSlKFa~cGkwfvSt 651 (705)
T KOG0639|consen 629 ---------------------------------------------------------LHLHESCVLSLKFAYCGKWFVST 651 (705)
T ss_pred ---------------------------------------------------------ecccccEEEEEEecccCceeeec
Confidence 12367779999999999999999
Q ss_pred cCCCCceEEEeeccCCCceeecccCCCeeEEEeCCCCCeEEEEeCCCcEEEeec
Q 014755 352 NDSMPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCTRLVLCTGSSHLYMWTP 405 (419)
Q Consensus 352 ~~d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 405 (419)
+.| +.+..|...-|.-+......+.|.++.+|-|.+++++|+.|....||.+
T Consensus 652 GkD--nlLnawrtPyGasiFqskE~SsVlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 652 GKD--NLLNAWRTPYGASIFQSKESSSVLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred Cch--hhhhhccCccccceeeccccCcceeeeeccCceEEEecCCCcceEEEEE
Confidence 999 9999999988887776678899999999999999999999999999876
No 106
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.97 E-value=1.4e-28 Score=200.11 Aligned_cols=272 Identities=15% Similarity=0.197 Sum_probs=228.2
Q ss_pred EEcCCCCEEEEEe-CCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCc
Q 014755 14 CFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLA 91 (419)
Q Consensus 14 ~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~ 91 (419)
...|....+++|+ |..+.++|...++.+.++. |...|+.+.|+|+...+++++.| -.|+||.............|..
T Consensus 226 d~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad-~~i~vws~~~~s~~~~~~~h~~ 304 (506)
T KOG0289|consen 226 DIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASAD-EIIRVWSVPLSSEPTSSRPHEE 304 (506)
T ss_pred eecCCCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCc-ceEEeeccccccCccccccccc
Confidence 3445557888998 6689999999999888765 88999999999999999999988 5999999988888888889999
Q ss_pred cEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccC-CC--CeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCe
Q 014755 92 GIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSP-KH--ASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWE 168 (419)
Q Consensus 92 ~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~-~~--~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~ 168 (419)
+|+.+..+|.|.||++++.++ +..+.|++++..+....+ .. .+++.+|+|||..+.++..| +.|++||+..+.
T Consensus 305 ~V~~ls~h~tgeYllsAs~d~-~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d---~~vkiwdlks~~ 380 (506)
T KOG0289|consen 305 PVTGLSLHPTGEYLLSASNDG-TWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPD---GVVKIWDLKSQT 380 (506)
T ss_pred cceeeeeccCCcEEEEecCCc-eEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCC---ceEEEEEcCCcc
Confidence 999999999999999999998 999999999988773333 23 35999999999999999987 899999999999
Q ss_pred EEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEE
Q 014755 169 IMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLR 247 (419)
Q Consensus 169 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~ 247 (419)
.+..+.+|.++|..++|+.+|-++++ ...|+.|++||+ .-+..+++...... .+.++.|++.|++|+.++.|=+|+
T Consensus 381 ~~a~Fpght~~vk~i~FsENGY~Lat--~add~~V~lwDLRKl~n~kt~~l~~~~-~v~s~~fD~SGt~L~~~g~~l~Vy 457 (506)
T KOG0289|consen 381 NVAKFPGHTGPVKAISFSENGYWLAT--AADDGSVKLWDLRKLKNFKTIQLDEKK-EVNSLSFDQSGTYLGIAGSDLQVY 457 (506)
T ss_pred ccccCCCCCCceeEEEeccCceEEEE--EecCCeEEEEEehhhcccceeeccccc-cceeEEEcCCCCeEEeecceeEEE
Confidence 99999999999999999999999999 677888999999 55666666655433 799999999999999998775555
Q ss_pred EEEcC--CceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCC
Q 014755 248 VLNHL--TWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKP 325 (419)
Q Consensus 248 v~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (419)
+++-. ++.++..+.
T Consensus 458 ~~~k~~k~W~~~~~~~---------------------------------------------------------------- 473 (506)
T KOG0289|consen 458 ICKKKTKSWTEIKELA---------------------------------------------------------------- 473 (506)
T ss_pred EEecccccceeeehhh----------------------------------------------------------------
Confidence 55522 333333322
Q ss_pred CCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeec
Q 014755 326 PTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDI 364 (419)
Q Consensus 326 ~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~ 364 (419)
.|.+..+.+.|....+++++++.| ..++++.+
T Consensus 474 -----~~sg~st~v~Fg~~aq~l~s~smd--~~l~~~a~ 505 (506)
T KOG0289|consen 474 -----DHSGLSTGVRFGEHAQYLASTSMD--AILRLYAL 505 (506)
T ss_pred -----hcccccceeeecccceEEeeccch--hheEEeec
Confidence 355667889999999999999988 88888754
No 107
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=6.7e-29 Score=194.39 Aligned_cols=282 Identities=13% Similarity=0.161 Sum_probs=237.3
Q ss_pred eecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEc---
Q 014755 44 FSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSL--- 120 (419)
Q Consensus 44 ~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~--- 120 (419)
.+|.+.|+.++-......+.+++.| .+.+||.+++++++.++.+|.+.|++++|++.+..+++++.|+ +-.||..
T Consensus 145 ~GHkDGiW~Vaa~~tqpi~gtASAD-hTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~-taHIW~~av~ 222 (481)
T KOG0300|consen 145 EGHKDGIWHVAADSTQPICGTASAD-HTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDE-TAHIWKAAVN 222 (481)
T ss_pred cccccceeeehhhcCCcceeecccc-cceeEEeeccccceeeecccccceeeEEeccccceEEEccCCc-chHHHHHhhc
Confidence 3599999999998888888899887 7999999999999999999999999999999999999999988 8889851
Q ss_pred ---CC------------------------------C----eEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEE
Q 014755 121 ---LN------------------------------T----ACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLL 162 (419)
Q Consensus 121 ---~~------------------------------~----~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~ 162 (419)
.. + .++. +.+|...|.+..|-..|+.+++++.| .+..+|
T Consensus 223 ~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWD---RTAnlw 299 (481)
T KOG0300|consen 223 WEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWD---RTANLW 299 (481)
T ss_pred CcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeecc---ccceee
Confidence 10 0 0111 56777788899999999999999998 799999
Q ss_pred eccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC--CCceEEEEeecCCCCceeEEEEccCCCeEEEE
Q 014755 163 SCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP--DGRCLLKYQAYESGLGVKSISWSPCGQFLAVG 240 (419)
Q Consensus 163 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~--~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 240 (419)
|+++++.+..+.+|+...+.++-+|..++++. .+.|.+.++||. .-..+..|++|.. .|+++.|..+. .+++|
T Consensus 300 DVEtge~v~~LtGHd~ELtHcstHptQrLVvT--sSrDtTFRLWDFReaI~sV~VFQGHtd--tVTS~vF~~dd-~vVSg 374 (481)
T KOG0300|consen 300 DVETGEVVNILTGHDSELTHCSTHPTQRLVVT--SSRDTTFRLWDFREAIQSVAVFQGHTD--TVTSVVFNTDD-RVVSG 374 (481)
T ss_pred eeccCceeccccCcchhccccccCCcceEEEE--eccCceeEeccchhhcceeeeeccccc--ceeEEEEecCC-ceeec
Confidence 99999999999999999999999999988887 677999999999 4456677888777 89999998765 68899
Q ss_pred EecCcEEEEEcCCce-eeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCC
Q 014755 241 SYDQTLRVLNHLTWK-TFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPIS 319 (419)
Q Consensus 241 ~~d~~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (419)
+.|.+|+|||+++.+ ++.++.
T Consensus 375 SDDrTvKvWdLrNMRsplATIR---------------------------------------------------------- 396 (481)
T KOG0300|consen 375 SDDRTVKVWDLRNMRSPLATIR---------------------------------------------------------- 396 (481)
T ss_pred CCCceEEEeeeccccCcceeee----------------------------------------------------------
Confidence 999999999997643 333332
Q ss_pred CCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec-----ccCCCeeEEEeCCCCC--eEE
Q 014755 320 LPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL-----VQKDPIRAATWDPTCT--RLV 392 (419)
Q Consensus 320 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~-----~~~~~v~~~~~s~~~~--~l~ 392 (419)
-..+++.++.+..++++|.--++ ..|++||+...++..+. +|...|+|++|..+-. -|+
T Consensus 397 ------------tdS~~NRvavs~g~~iIAiPhDN--RqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~AW~eehp~cnLf 462 (481)
T KOG0300|consen 397 ------------TDSPANRVAVSKGHPIIAIPHDN--RQVRLFDLNGNRLARLPRTSRQGHRRMVTCCAWLEEHPACNLF 462 (481)
T ss_pred ------------cCCccceeEeecCCceEEeccCC--ceEEEEecCCCccccCCcccccccceeeeeeeccccCcccccc
Confidence 12346788999999999998887 99999999987765443 5999999999986544 588
Q ss_pred EEeCCCcEEEeecCC
Q 014755 393 LCTGSSHLYMWTPSG 407 (419)
Q Consensus 393 s~~~dg~i~vw~~~~ 407 (419)
+++.|..+.=|++..
T Consensus 463 tcGFDR~v~gW~in~ 477 (481)
T KOG0300|consen 463 TCGFDRMVAGWKINT 477 (481)
T ss_pred cccccceeeeeEecc
Confidence 999999999999874
No 108
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=7.7e-28 Score=188.07 Aligned_cols=261 Identities=13% Similarity=0.197 Sum_probs=210.1
Q ss_pred EEEEeccCCeEEEEEccCC------------cceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-e
Q 014755 62 ILCGLYKRLMIQAWSLTQP------------EWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-V 128 (419)
Q Consensus 62 l~~~~~~~g~i~iw~~~~~------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~ 128 (419)
+++|++. ..|.-+++... .+...+..|.+++++++. ++.++++++.|. +|+|||++...... +
T Consensus 4 iIvGtYE-~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAV--s~~~~aSGssDe-tI~IYDm~k~~qlg~l 79 (362)
T KOG0294|consen 4 IIVGTYE-HVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAV--SGPYVASGSSDE-TIHIYDMRKRKQLGIL 79 (362)
T ss_pred EEEeeee-eEEEEEEeccCccccccccceeeeccccccccccceeEEEe--cceeEeccCCCC-cEEEEeccchhhhcce
Confidence 5666665 35555555321 123345678899999998 589999999999 99999999877666 7
Q ss_pred ccCCCCeeeEEEccCCC--EEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEE
Q 014755 129 QSPKHASKGVAFTQDGK--FAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIY 206 (419)
Q Consensus 129 ~~~~~~~~~~~~~~~~~--~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~ 206 (419)
..|.+.++++.|.++-. .|++++.| |.|.+|+...++++..++.|.+.|+.++.+|.+++.+. .+.|+.++.|
T Consensus 80 l~HagsitaL~F~~~~S~shLlS~sdD---G~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALs--Vg~D~~lr~W 154 (362)
T KOG0294|consen 80 LSHAGSITALKFYPPLSKSHLLSGSDD---GHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALS--VGGDQVLRTW 154 (362)
T ss_pred eccccceEEEEecCCcchhheeeecCC---CcEEEEEcCCeEEeeeecccccccceeEecCCCceEEE--EcCCceeeee
Confidence 88899999999999875 89999887 89999999999999999999999999999999998777 5679999999
Q ss_pred cC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCccccc
Q 014755 207 SP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLD 285 (419)
Q Consensus 207 d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (419)
++ .|+.-..+.... ..+.+.|+|.|.+++.++.+ .|-+|.+.+.+....+..+
T Consensus 155 NLV~Gr~a~v~~L~~---~at~v~w~~~Gd~F~v~~~~-~i~i~q~d~A~v~~~i~~~---------------------- 208 (362)
T KOG0294|consen 155 NLVRGRVAFVLNLKN---KATLVSWSPQGDHFVVSGRN-KIDIYQLDNASVFREIENP---------------------- 208 (362)
T ss_pred hhhcCccceeeccCC---cceeeEEcCCCCEEEEEecc-EEEEEecccHhHhhhhhcc----------------------
Confidence 99 887666555433 35669999999988888876 6899998876665554422
Q ss_pred ceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeecc
Q 014755 286 MSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDIC 365 (419)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~ 365 (419)
..+.++.|- ++..|++|.+| +.|.+||.+
T Consensus 209 ------------------------------------------------~r~l~~~~l-~~~~L~vG~d~--~~i~~~D~d 237 (362)
T KOG0294|consen 209 ------------------------------------------------KRILCATFL-DGSELLVGGDN--EWISLKDTD 237 (362)
T ss_pred ------------------------------------------------ccceeeeec-CCceEEEecCC--ceEEEeccC
Confidence 113445543 56688899988 999999999
Q ss_pred CCCceeec-ccCCCeeEEEe--CCCCCeEEEEeCCCcEEEeecCCC
Q 014755 366 RQEPAAIL-VQKDPIRAATW--DPTCTRLVLCTGSSHLYMWTPSGA 408 (419)
Q Consensus 366 ~~~~~~~~-~~~~~v~~~~~--s~~~~~l~s~~~dg~i~vw~~~~~ 408 (419)
+..+...+ .|..+|.++.+ .|++.+|+++|.||.|++||++..
T Consensus 238 s~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 238 SDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred CCccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEcccc
Confidence 87766555 69999999984 577889999999999999999865
No 109
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.97 E-value=2.6e-28 Score=190.70 Aligned_cols=300 Identities=15% Similarity=0.215 Sum_probs=220.7
Q ss_pred EeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC
Q 014755 43 LFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN 122 (419)
Q Consensus 43 ~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~ 122 (419)
.+.+.. ..|+.|++.|.+||+|+.+ |.|.|||+.+...-+.+.+|..+|++++||+||+.|++++.|. .|.+||+..
T Consensus 20 tld~~~-a~~~~Fs~~G~~lAvGc~n-G~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~-si~lwDl~~ 96 (405)
T KOG1273|consen 20 TLDNPL-AECCQFSRWGDYLAVGCAN-GRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDW-SIKLWDLLK 96 (405)
T ss_pred eccCCc-cceEEeccCcceeeeeccC-CcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCc-eeEEEeccC
Confidence 344444 7899999999999999987 9999999999988888999999999999999999999999998 999999999
Q ss_pred CeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeE--EEEEecc--ccceeeeeECCCCCeEEEEcCC
Q 014755 123 TACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEI--MGVFAVD--TLDLADIEWSPDDSAIVIWDSP 198 (419)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~--~~~~~~~--~~~v~~~~~~~~~~~l~~~~~~ 198 (419)
|.+.+......+|..+.|+|..+..++++.-. ..-.+.++..+.. +..-... +....+..|.+.|+++++ +.
T Consensus 97 gs~l~rirf~spv~~~q~hp~k~n~~va~~~~--~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIit--Gt 172 (405)
T KOG1273|consen 97 GSPLKRIRFDSPVWGAQWHPRKRNKCVATIME--ESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIIT--GT 172 (405)
T ss_pred CCceeEEEccCccceeeeccccCCeEEEEEec--CCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEE--ec
Confidence 99888666788999999999775544444221 2334444433211 1110000 112334568899999999 78
Q ss_pred CCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceecc
Q 014755 199 LEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKE 277 (419)
Q Consensus 199 ~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (419)
..|.+.+++. +-+++..+.... ...|.++.++..|++|+.-+.|..||.|++..--....-....+. -.+..
T Consensus 173 sKGkllv~~a~t~e~vas~rits-~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~------~K~qD 245 (405)
T KOG1273|consen 173 SKGKLLVYDAETLECVASFRITS-VQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPE------HKLQD 245 (405)
T ss_pred CcceEEEEecchheeeeeeeech-heeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChh------HHHHH
Confidence 8999999999 777777776544 127999999999999999999999999997631110000000000 00000
Q ss_pred CCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCc
Q 014755 278 VDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPT 357 (419)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~ 357 (419)
+ -.+..=.+++||.+|.|+++++. +..
T Consensus 246 ---------------------------------------------------v-VNk~~Wk~ccfs~dgeYv~a~s~-~aH 272 (405)
T KOG1273|consen 246 ---------------------------------------------------V-VNKLQWKKCCFSGDGEYVCAGSA-RAH 272 (405)
T ss_pred ---------------------------------------------------H-HhhhhhhheeecCCccEEEeccc-cce
Confidence 0 01111246899999999998885 458
Q ss_pred eEEEeeccCCCceeec-ccC-CCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeE
Q 014755 358 TLWIWDICRQEPAAIL-VQK-DPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYC 410 (419)
Q Consensus 358 ~i~iwd~~~~~~~~~~-~~~-~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~ 410 (419)
.++||....|.++..+ |.. .....+.|+|-...+++- ..|.+++|....-+.
T Consensus 273 aLYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp~i~si-~sg~v~iw~~~~~en 326 (405)
T KOG1273|consen 273 ALYIWEKSIGSLVKILHGTKGEELLDVNWHPVRPIIASI-ASGVVYIWAVVQVEN 326 (405)
T ss_pred eEEEEecCCcceeeeecCCchhheeecccccceeeeeec-cCCceEEEEeecccc
Confidence 8999999999999888 333 568899999999988887 679999999875443
No 110
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.97 E-value=1.6e-28 Score=204.05 Aligned_cols=273 Identities=15% Similarity=0.205 Sum_probs=209.5
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCCCcEE----EEee--cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceee
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHSFKVV----QLFS--CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCK 85 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~~~~~----~~~~--~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~ 85 (419)
+++.|.|-.+++|+ |.+|++||....... +.+. ....|.+++|++.|..|++.+.. ...+|+|-...+....
T Consensus 173 l~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~-aqakl~DRdG~~~~e~ 251 (641)
T KOG0772|consen 173 LAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGS-AQAKLLDRDGFEIVEF 251 (641)
T ss_pred eeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecC-cceeEEccCCceeeee
Confidence 78999999999999 999999999864321 1221 35679999999999998888866 6899999765443322
Q ss_pred ------------eecCCccEeEEEECCCCC-EEEEEecCCCeEEEEEcCCCeEEE--e-----ccCCCCeeeEEEccCCC
Q 014755 86 ------------IDEGLAGIAYARWSPDSR-HILTTSDFQLRLTVWSLLNTACVH--V-----QSPKHASKGVAFTQDGK 145 (419)
Q Consensus 86 ------------~~~~~~~v~~~~~~~~~~-~l~~~~~~~~~i~iwd~~~~~~~~--~-----~~~~~~~~~~~~~~~~~ 145 (419)
.++|...+++.+|+|+.+ .+++++.|+ ++++||+...+... + .+..-.++.++|++|++
T Consensus 252 ~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~Dg-tlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~ 330 (641)
T KOG0772|consen 252 SKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDG-TLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGK 330 (641)
T ss_pred eccchhhhhhhccCCceeeeeccccccCcccceEEecCCC-cEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcc
Confidence 346788899999999654 577778877 99999998733221 1 12223458999999999
Q ss_pred EEEEEeecCCCCeEEEEeccCCeE---EEEEecccc--ceeeeeECCCCCeEEEEcCCCCceEEEEcC--CCceEEEEee
Q 014755 146 FAAICTRRDCKDYINLLSCHTWEI---MGVFAVDTL--DLADIEWSPDDSAIVIWDSPLEYKVLIYSP--DGRCLLKYQA 218 (419)
Q Consensus 146 ~l~~~~~~~~~g~v~i~d~~~~~~---~~~~~~~~~--~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~--~~~~~~~~~~ 218 (419)
.||.++.| |.|.+|+...... ...-..|.. .|+++.||+||++|+. .+.|+.+++||+ -.+++....+
T Consensus 331 ~iAagc~D---GSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlS--Rg~D~tLKvWDLrq~kkpL~~~tg 405 (641)
T KOG0772|consen 331 LIAAGCLD---GSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLS--RGFDDTLKVWDLRQFKKPLNVRTG 405 (641)
T ss_pred hhhhcccC---CceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhh--ccCCCceeeeeccccccchhhhcC
Confidence 99999987 8999999865322 222344555 8999999999999998 788999999999 4456666665
Q ss_pred cCCCCceeEEEEccCCCeEEEEEe------cCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeecc
Q 014755 219 YESGLGVKSISWSPCGQFLAVGSY------DQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLN 292 (419)
Q Consensus 219 ~~~~~~v~~~~~s~~~~~l~~~~~------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (419)
......-+.++|||+.++|++|.. .|.+.+||..+...+..+..
T Consensus 406 L~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i------------------------------ 455 (641)
T KOG0772|consen 406 LPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDI------------------------------ 455 (641)
T ss_pred CCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecC------------------------------
Confidence 555556788999999999999864 46799999888777666541
Q ss_pred CccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEee
Q 014755 293 DDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWD 363 (419)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd 363 (419)
....|..+.|+|.=+.|.+|+.| |++++|-
T Consensus 456 ---------------------------------------~~aSvv~~~WhpkLNQi~~gsgd--G~~~vyY 485 (641)
T KOG0772|consen 456 ---------------------------------------STASVVRCLWHPKLNQIFAGSGD--GTAHVYY 485 (641)
T ss_pred ---------------------------------------CCceEEEEeecchhhheeeecCC--CceEEEE
Confidence 12237789999998888888888 9999874
No 111
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1e-27 Score=186.91 Aligned_cols=244 Identities=14% Similarity=0.140 Sum_probs=192.1
Q ss_pred cccccCeEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceee
Q 014755 7 YKQTGPSCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCK 85 (419)
Q Consensus 7 ~~~~~~~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~ 85 (419)
+...+.|.|+|.+..|++++ |+.+++||.........+.|..++.+++|.++ ..+++|+.| |.|+.+|+.+++.. .
T Consensus 13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~~~~plL~c~F~d~-~~~~~G~~d-g~vr~~Dln~~~~~-~ 89 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFKHGAPLLDCAFADE-STIVTGGLD-GQVRRYDLNTGNED-Q 89 (323)
T ss_pred hhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhheecCCceeeeeccCC-ceEEEeccC-ceEEEEEecCCcce-e
Confidence 33445589999877777776 99999999999988888999999999999974 467788877 89999999988754 6
Q ss_pred eecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEecc
Q 014755 86 IDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCH 165 (419)
Q Consensus 86 ~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~ 165 (419)
+..|..+|.++..++....+++++-|+ +|++||.+.............|.++..+ ++.|++|+.+ ..+.+||++
T Consensus 90 igth~~~i~ci~~~~~~~~vIsgsWD~-~ik~wD~R~~~~~~~~d~~kkVy~~~v~--g~~LvVg~~~---r~v~iyDLR 163 (323)
T KOG1036|consen 90 IGTHDEGIRCIEYSYEVGCVISGSWDK-TIKFWDPRNKVVVGTFDQGKKVYCMDVS--GNRLVVGTSD---RKVLIYDLR 163 (323)
T ss_pred eccCCCceEEEEeeccCCeEEEcccCc-cEEEEeccccccccccccCceEEEEecc--CCEEEEeecC---ceEEEEEcc
Confidence 778999999999999888999999998 9999999985544433444467776664 6688887776 699999999
Q ss_pred CCeEEEEEe--ccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CC----ceEEEEeecCCC-------CceeEEEEc
Q 014755 166 TWEIMGVFA--VDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DG----RCLLKYQAYESG-------LGVKSISWS 231 (419)
Q Consensus 166 ~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~----~~~~~~~~~~~~-------~~v~~~~~s 231 (419)
+.....+.. .-...++++++-|++.-.++ ++.+|.|.+=.+ +. .....+..|... .+|++++|+
T Consensus 164 n~~~~~q~reS~lkyqtR~v~~~pn~eGy~~--sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fh 241 (323)
T KOG1036|consen 164 NLDEPFQRRESSLKYQTRCVALVPNGEGYVV--SSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFH 241 (323)
T ss_pred cccchhhhccccceeEEEEEEEecCCCceEE--EeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEec
Confidence 865544322 23467899999998877777 667888777555 22 233344444321 479999999
Q ss_pred cCCCeEEEEEecCcEEEEEcCCceeeeeec
Q 014755 232 PCGQFLAVGSYDQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 232 ~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 261 (419)
|-.+.+++|+.||.|.+||+.+.+.+.++.
T Consensus 242 p~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~ 271 (323)
T KOG1036|consen 242 PIHGTFATGGSDGIVNIWDLFNRKRLKQLA 271 (323)
T ss_pred cccceEEecCCCceEEEccCcchhhhhhcc
Confidence 999999999999999999999888777764
No 112
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=1e-28 Score=210.65 Aligned_cols=229 Identities=13% Similarity=0.172 Sum_probs=199.6
Q ss_pred CCCCEEEEEe-CCeEEEEecCCCcE------EEEe-ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC--cceeee
Q 014755 17 PNARYIAVAV-DYRLVVRDAHSFKV------VQLF-SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP--EWTCKI 86 (419)
Q Consensus 17 ~d~~~la~~~-~~~i~i~~~~~~~~------~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~--~~~~~~ 86 (419)
|+++||.+|+ |+.|++|+.....- ...+ .|.+.|..++...+|+.|++++.| -+|++|+...+ -+...+
T Consensus 35 ~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsD-tTVK~W~~~~~~~~c~sti 113 (735)
T KOG0308|consen 35 PNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSD-TTVKVWNAHKDNTFCMSTI 113 (735)
T ss_pred CCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCC-ceEEEeecccCcchhHhhh
Confidence 4678899998 89999998864322 2223 489999999999999999999988 69999999877 567788
Q ss_pred ecCCccEeEEEE-CCCCCEEEEEecCCCeEEEEEcCCCeE--E--------E-ec-cCCCCeeeEEEccCCCEEEEEeec
Q 014755 87 DEGLAGIAYARW-SPDSRHILTTSDFQLRLTVWSLLNTAC--V--------H-VQ-SPKHASKGVAFTQDGKFAAICTRR 153 (419)
Q Consensus 87 ~~~~~~v~~~~~-~~~~~~l~~~~~~~~~i~iwd~~~~~~--~--------~-~~-~~~~~~~~~~~~~~~~~l~~~~~~ 153 (419)
..|.+-|.|++. .++...+++||-|+ .|.+||++++.. + . +. ++...+++++.++.|..|+.|+..
T Consensus 114 r~H~DYVkcla~~ak~~~lvaSgGLD~-~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgte 192 (735)
T KOG0308|consen 114 RTHKDYVKCLAYIAKNNELVASGGLDR-KIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTE 192 (735)
T ss_pred hcccchheeeeecccCceeEEecCCCc-cEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcc
Confidence 899999999999 78888899999988 999999997632 1 1 22 677788999999999888888765
Q ss_pred CCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEcc
Q 014755 154 DCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSP 232 (419)
Q Consensus 154 ~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~ 232 (419)
+.+++||.++.+.+..+++|...|..+..++||..++. +++|++|++||+ ..+++.++..|.. .|.++..+|
T Consensus 193 ---k~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls--~sSDgtIrlWdLgqQrCl~T~~vH~e--~VWaL~~~~ 265 (735)
T KOG0308|consen 193 ---KDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLS--ASSDGTIRLWDLGQQRCLATYIVHKE--GVWALQSSP 265 (735)
T ss_pred ---cceEEeccccccceeeeeccccceEEEEEcCCCCeEee--cCCCceEEeeeccccceeeeEEeccC--ceEEEeeCC
Confidence 89999999999999999999999999999999999998 788999999999 8889999988887 799999999
Q ss_pred CCCeEEEEEecCcEEEEEcCCc
Q 014755 233 CGQFLAVGSYDQTLRVLNHLTW 254 (419)
Q Consensus 233 ~~~~l~~~~~d~~i~v~d~~~~ 254 (419)
+-+.+++|+.||.|..=|+++.
T Consensus 266 sf~~vYsG~rd~~i~~Tdl~n~ 287 (735)
T KOG0308|consen 266 SFTHVYSGGRDGNIYRTDLRNP 287 (735)
T ss_pred CcceEEecCCCCcEEecccCCc
Confidence 9999999999999999998874
No 113
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.97 E-value=9.5e-29 Score=204.85 Aligned_cols=270 Identities=14% Similarity=0.157 Sum_probs=223.4
Q ss_pred eEEcCCCCEEEEEeCCeEEEEecCCCc---EEE---EeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcce--e
Q 014755 13 SCFSPNARYIAVAVDYRLVVRDAHSFK---VVQ---LFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWT--C 84 (419)
Q Consensus 13 ~~~s~d~~~la~~~~~~i~i~~~~~~~---~~~---~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~--~ 84 (419)
+.+|...+++.+|+.+.|+|||+.... ++. .+.....|.++.+.|||+.|++|+.- .++.|||+...... .
T Consensus 425 vtIS~~trhVyTgGkgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGea-stlsiWDLAapTprika 503 (705)
T KOG0639|consen 425 VTISNPTRHVYTGGKGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEA-STLSIWDLAAPTPRIKA 503 (705)
T ss_pred EEecCCcceeEecCCCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEecccc-ceeeeeeccCCCcchhh
Confidence 568999999999999999999997432 222 22345679999999999999999976 79999999866443 2
Q ss_pred eeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEe
Q 014755 85 KIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLS 163 (419)
Q Consensus 85 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d 163 (419)
.+....-...+++.+||.+..+++..|+ .|.|||+.+...++ +.+|...+.|+.+++||..|.+|+-| .+|+.||
T Consensus 504 eltssapaCyALa~spDakvcFsccsdG-nI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlD---ntvRcWD 579 (705)
T KOG0639|consen 504 ELTSSAPACYALAISPDAKVCFSCCSDG-NIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLD---NTVRCWD 579 (705)
T ss_pred hcCCcchhhhhhhcCCccceeeeeccCC-cEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCc---cceeehh
Confidence 3333334577899999999999999888 99999999998888 99999999999999999999999987 7999999
Q ss_pred ccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEec
Q 014755 164 CHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYD 243 (419)
Q Consensus 164 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 243 (419)
+++++.+.+... ...|.++.++|++.++++ +-.++.+.+...++.....+..|+. .|.++.|.+.|+++++.+.|
T Consensus 580 lregrqlqqhdF-~SQIfSLg~cP~~dWlav--GMens~vevlh~skp~kyqlhlheS--cVLSlKFa~cGkwfvStGkD 654 (705)
T KOG0639|consen 580 LREGRQLQQHDF-SSQIFSLGYCPTGDWLAV--GMENSNVEVLHTSKPEKYQLHLHES--CVLSLKFAYCGKWFVSTGKD 654 (705)
T ss_pred hhhhhhhhhhhh-hhhheecccCCCccceee--ecccCcEEEEecCCccceeeccccc--EEEEEEecccCceeeecCch
Confidence 999877655443 478999999999999999 7778889888887766555555544 89999999999999999999
Q ss_pred CcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCC
Q 014755 244 QTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQ 323 (419)
Q Consensus 244 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (419)
+-+..|...-|..+....
T Consensus 655 nlLnawrtPyGasiFqsk-------------------------------------------------------------- 672 (705)
T KOG0639|consen 655 NLLNAWRTPYGASIFQSK-------------------------------------------------------------- 672 (705)
T ss_pred hhhhhccCccccceeecc--------------------------------------------------------------
Confidence 999999987666554432
Q ss_pred CCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeec
Q 014755 324 KPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDI 364 (419)
Q Consensus 324 ~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~ 364 (419)
....|.++.+|.|.+|+++|+.| ....+|.+
T Consensus 673 --------E~SsVlsCDIS~ddkyIVTGSGd--kkATVYeV 703 (705)
T KOG0639|consen 673 --------ESSSVLSCDISFDDKYIVTGSGD--KKATVYEV 703 (705)
T ss_pred --------ccCcceeeeeccCceEEEecCCC--cceEEEEE
Confidence 23458899999999999999998 77777764
No 114
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=2.9e-27 Score=184.38 Aligned_cols=276 Identities=12% Similarity=0.133 Sum_probs=213.9
Q ss_pred cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeE
Q 014755 46 CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTAC 125 (419)
Q Consensus 46 ~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~ 125 (419)
..+.|.++.|+|.+..|+++++| |++++||....++...+ .|..++.+++|.+ ...+++++-|+ .|+.+|+.+++.
T Consensus 12 P~d~IS~v~f~~~~~~LLvssWD-gslrlYdv~~~~l~~~~-~~~~plL~c~F~d-~~~~~~G~~dg-~vr~~Dln~~~~ 87 (323)
T KOG1036|consen 12 PEDGISSVKFSPSSSDLLVSSWD-GSLRLYDVPANSLKLKF-KHGAPLLDCAFAD-ESTIVTGGLDG-QVRRYDLNTGNE 87 (323)
T ss_pred ChhceeeEEEcCcCCcEEEEecc-CcEEEEeccchhhhhhe-ecCCceeeeeccC-CceEEEeccCc-eEEEEEecCCcc
Confidence 45789999999999999999998 89999999888655444 6889999999987 45688888888 999999999999
Q ss_pred EEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEE
Q 014755 126 VHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLI 205 (419)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~ 205 (419)
..+..|..++.++..++....+++|+.| ++|++||.+.......+... ..|.++.. .+..|++ +..+..+.+
T Consensus 88 ~~igth~~~i~ci~~~~~~~~vIsgsWD---~~ik~wD~R~~~~~~~~d~~-kkVy~~~v--~g~~LvV--g~~~r~v~i 159 (323)
T KOG1036|consen 88 DQIGTHDEGIRCIEYSYEVGCVISGSWD---KTIKFWDPRNKVVVGTFDQG-KKVYCMDV--SGNRLVV--GTSDRKVLI 159 (323)
T ss_pred eeeccCCCceEEEEeeccCCeEEEcccC---ccEEEEeccccccccccccC-ceEEEEec--cCCEEEE--eecCceEEE
Confidence 9999999999999999988999999998 89999999975444444433 36777765 4667777 677999999
Q ss_pred EcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceee----eeec-ccccccCCCccceeccCC
Q 014755 206 YSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTF----AEFM-HLSTVRGPCFPAVFKEVD 279 (419)
Q Consensus 206 ~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~ 279 (419)
||+ +-....+.....-...+.++++-|++.-.+.++-||.|.+=.++..+.. ..|+ |...-
T Consensus 160 yDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~------------- 226 (323)
T KOG1036|consen 160 YDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSE------------- 226 (323)
T ss_pred EEcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeeccc-------------
Confidence 999 3332222222222236899999998888999999999887555543211 1222 21110
Q ss_pred CcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceE
Q 014755 280 EPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTL 359 (419)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i 359 (419)
+... --.+|++++|+|--..||+|+.| |.|
T Consensus 227 -------------------------~~~~-----------------------~~yPVNai~Fhp~~~tfaTgGsD--G~V 256 (323)
T KOG1036|consen 227 -------------------------KDTE-----------------------IIYPVNAIAFHPIHGTFATGGSD--GIV 256 (323)
T ss_pred -------------------------CCce-----------------------EEEEeceeEeccccceEEecCCC--ceE
Confidence 0111 12358999999999999999999 999
Q ss_pred EEeeccCCCceeec-ccCCCeeEEEeCCCCCeEEEEeC
Q 014755 360 WIWDICRQEPAAIL-VQKDPIRAATWDPTCTRLVLCTG 396 (419)
Q Consensus 360 ~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~ 396 (419)
.+||+.+.+.+..+ +....|.+++|+.||..||.++.
T Consensus 257 ~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~LAia~s 294 (323)
T KOG1036|consen 257 NIWDLFNRKRLKQLAKYETSISSLSFSMDGSLLAIASS 294 (323)
T ss_pred EEccCcchhhhhhccCCCCceEEEEeccCCCeEEEEec
Confidence 99999987766555 45577999999999999999874
No 115
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.97 E-value=6.1e-28 Score=197.83 Aligned_cols=243 Identities=15% Similarity=0.174 Sum_probs=202.0
Q ss_pred hhhhcccccC---eEEcCCCCEEEEEe-CCeEEEEecCCCcEEE----E---------------eecCcceeEEEEecCC
Q 014755 3 FTEAYKQTGP---SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQ----L---------------FSCLDKISYIEWALDS 59 (419)
Q Consensus 3 ~~~~~~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~----~---------------~~~~~~v~~~~~s~~~ 59 (419)
|.....|..+ |+++||.+++.+++ +++|.-|++.+++..+ . ..|...+.+++.|+||
T Consensus 135 ~~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dg 214 (479)
T KOG0299|consen 135 FRVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDG 214 (479)
T ss_pred ceeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCC
Confidence 3344455554 78999999999998 8889999988776331 1 1467789999999999
Q ss_pred CeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeE
Q 014755 60 EYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGV 138 (419)
Q Consensus 60 ~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~ 138 (419)
++||+|+.| ..|.||+..+.+.+..+.+|.+.|.+++|-.....+++++.|. .+++|+++....+. +.+|...|.++
T Consensus 215 kylatgg~d-~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Dr-svkvw~~~~~s~vetlyGHqd~v~~I 292 (479)
T KOG0299|consen 215 KYLATGGRD-RHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADR-SVKVWSIDQLSYVETLYGHQDGVLGI 292 (479)
T ss_pred cEEEecCCC-ceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCC-ceEEEehhHhHHHHHHhCCccceeee
Confidence 999999987 6999999999999999999999999999999889999999998 99999999877666 88999999999
Q ss_pred EEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEe
Q 014755 139 AFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQ 217 (419)
Q Consensus 139 ~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~ 217 (419)
....-++.+.+++.| +++++|++. .+....+.++.+.+.|++|-.+.. +++ ++.+|.|.+|++ ..+++....
T Consensus 293 daL~reR~vtVGgrD---rT~rlwKi~-eesqlifrg~~~sidcv~~In~~H-fvs--GSdnG~IaLWs~~KKkplf~~~ 365 (479)
T KOG0299|consen 293 DALSRERCVTVGGRD---RTVRLWKIP-EESQLIFRGGEGSIDCVAFINDEH-FVS--GSDNGSIALWSLLKKKPLFTSR 365 (479)
T ss_pred chhcccceEEecccc---ceeEEEecc-ccceeeeeCCCCCeeeEEEecccc-eee--ccCCceEEEeeecccCceeEee
Confidence 988888888888777 899999994 444556778888999999976654 455 788999999999 666665543
Q ss_pred ecC----------CCCceeEEEEccCCCeEEEEEecCcEEEEEcCCc
Q 014755 218 AYE----------SGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTW 254 (419)
Q Consensus 218 ~~~----------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~ 254 (419)
... +..+|++++..|...++++|+.+|.|++|-+..+
T Consensus 366 ~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g 412 (479)
T KOG0299|consen 366 LAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDG 412 (479)
T ss_pred ccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCC
Confidence 211 1137999999999999999999999999998876
No 116
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.97 E-value=4e-29 Score=198.73 Aligned_cols=276 Identities=17% Similarity=0.201 Sum_probs=213.7
Q ss_pred hcccccC---eEEcCCC-CEEEEEe-CCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccC
Q 014755 6 AYKQTGP---SCFSPNA-RYIAVAV-DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQ 79 (419)
Q Consensus 6 ~~~~~~~---~~~s~d~-~~la~~~-~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~ 79 (419)
+.||... ++=+|.. ..+|+|+ ||.|+|||+...++...+. |.+.|..|++.. ..+++++.| .+|+.|.++.
T Consensus 62 L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdD-KtvK~wk~~~ 138 (433)
T KOG0268|consen 62 LDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDD-KTVKQWKIDG 138 (433)
T ss_pred ccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecCC-cceeeeeccC
Confidence 3466555 4556665 6788887 9999999999988888776 999999999987 456677656 6999999876
Q ss_pred CcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCC-EEEEEeecCCCC
Q 014755 80 PEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGK-FAAICTRRDCKD 157 (419)
Q Consensus 80 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~g 157 (419)
. ....+ .....+..+.-+..+..++++|. .|.|||.+...++. +......+.++.|+|... .|+++..| +
T Consensus 139 ~-p~~ti-lg~s~~~gIdh~~~~~~FaTcGe---~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sD---r 210 (433)
T KOG0268|consen 139 P-PLHTI-LGKSVYLGIDHHRKNSVFATCGE---QIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASD---R 210 (433)
T ss_pred C-cceee-eccccccccccccccccccccCc---eeeecccccCCccceeecCCCceeEEecCCCcchheeeeccC---C
Confidence 3 44444 34455677776667777888876 69999998877777 666777889999999875 45555555 8
Q ss_pred eEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC--CCceEEEEeecCCCCceeEEEEccCCC
Q 014755 158 YINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP--DGRCLLKYQAYESGLGVKSISWSPCGQ 235 (419)
Q Consensus 158 ~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~--~~~~~~~~~~~~~~~~v~~~~~s~~~~ 235 (419)
.|.+||+++..+++.... ...-+.++|+|.+-.+.+ +..|..++.||+ -...+.....|.. .|.+++|||.|+
T Consensus 211 sIvLyD~R~~~Pl~KVi~-~mRTN~IswnPeafnF~~--a~ED~nlY~~DmR~l~~p~~v~~dhvs--AV~dVdfsptG~ 285 (433)
T KOG0268|consen 211 SIVLYDLRQASPLKKVIL-TMRTNTICWNPEAFNFVA--ANEDHNLYTYDMRNLSRPLNVHKDHVS--AVMDVDFSPTGQ 285 (433)
T ss_pred ceEEEecccCCccceeee-eccccceecCccccceee--ccccccceehhhhhhcccchhhcccce--eEEEeccCCCcc
Confidence 999999999988776544 244578999995555555 778999999999 4456666666655 899999999999
Q ss_pred eEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEecc
Q 014755 236 FLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVME 315 (419)
Q Consensus 236 ~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (419)
-+++||.|.+|+||..+.+.....+. ..
T Consensus 286 EfvsgsyDksIRIf~~~~~~SRdiYh-tk--------------------------------------------------- 313 (433)
T KOG0268|consen 286 EFVSGSYDKSIRIFPVNHGHSRDIYH-TK--------------------------------------------------- 313 (433)
T ss_pred hhccccccceEEEeecCCCcchhhhh-Hh---------------------------------------------------
Confidence 99999999999999988765433221 11
Q ss_pred CCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCC
Q 014755 316 IPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQ 367 (419)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~ 367 (419)
....|.++.||-|.+|+++|++| +.|++|.....
T Consensus 314 ----------------RMq~V~~Vk~S~Dskyi~SGSdd--~nvRlWka~As 347 (433)
T KOG0268|consen 314 ----------------RMQHVFCVKYSMDSKYIISGSDD--GNVRLWKAKAS 347 (433)
T ss_pred ----------------hhheeeEEEEeccccEEEecCCC--cceeeeecchh
Confidence 22348999999999999999999 99999987653
No 117
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.96 E-value=7.6e-26 Score=187.78 Aligned_cols=305 Identities=14% Similarity=0.187 Sum_probs=234.3
Q ss_pred eEEcC-CCCEEEEEeCCeEEEEecCCCcEEEEee-----cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeee
Q 014755 13 SCFSP-NARYIAVAVDYRLVVRDAHSFKVVQLFS-----CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKI 86 (419)
Q Consensus 13 ~~~s~-d~~~la~~~~~~i~i~~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~ 86 (419)
+.|.| |.+++++.+.+.+..|+.+++.+.+..+ ....|.|+.|.++|+ +++|.++ |.|.||+..+.+..++.
T Consensus 206 a~FHPtd~nliit~Gk~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~engd-viTgDS~-G~i~Iw~~~~~~~~k~~ 283 (626)
T KOG2106|consen 206 ATFHPTDPNLIITCGKGHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLENGD-VITGDSG-GNILIWSKGTNRISKQV 283 (626)
T ss_pred EEeccCCCcEEEEeCCceEEEEEccCCceEEEeeccccccceEEEEEEEcCCCC-EEeecCC-ceEEEEeCCCceEEeEe
Confidence 57999 5677788889999999999988776443 346799999999997 5566655 89999999888877777
Q ss_pred ecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeE--EEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEec
Q 014755 87 DEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTAC--VHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSC 164 (419)
Q Consensus 87 ~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~ 164 (419)
..|.+.|.+++...+|.. ++++.|. .|..||-.-.+. ..++...+.++.++-...+ |++|... +.|..=.+
T Consensus 284 ~aH~ggv~~L~~lr~Gtl-lSGgKDR-ki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~d--i~vGTtr---N~iL~Gt~ 356 (626)
T KOG2106|consen 284 HAHDGGVFSLCMLRDGTL-LSGGKDR-KIILWDDNYRKLRETELPEQFGPIRTVAEGKGD--ILVGTTR---NFILQGTL 356 (626)
T ss_pred eecCCceEEEEEecCccE-eecCccc-eEEeccccccccccccCchhcCCeeEEecCCCc--EEEeecc---ceEEEeee
Confidence 799999999999999975 4588888 999999332222 2255555666666643333 6666553 45655555
Q ss_pred cCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecC
Q 014755 165 HTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQ 244 (419)
Q Consensus 165 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~ 244 (419)
+++- .....+|......++.+|+...++. ++.|+.+++|+ +.+++...... . ++.++.|+|.| .+|.|...|
T Consensus 357 ~~~f-~~~v~gh~delwgla~hps~~q~~T--~gqdk~v~lW~-~~k~~wt~~~~-d--~~~~~~fhpsg-~va~Gt~~G 428 (626)
T KOG2106|consen 357 ENGF-TLTVQGHGDELWGLATHPSKNQLLT--CGQDKHVRLWN-DHKLEWTKIIE-D--PAECADFHPSG-VVAVGTATG 428 (626)
T ss_pred cCCc-eEEEEecccceeeEEcCCChhheee--ccCcceEEEcc-CCceeEEEEec-C--ceeEeeccCcc-eEEEeeccc
Confidence 5433 2344567778999999999999998 78899999999 44444444332 2 68999999999 999999999
Q ss_pred cEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCC
Q 014755 245 TLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQK 324 (419)
Q Consensus 245 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (419)
...|.|.++...+..-.
T Consensus 429 ~w~V~d~e~~~lv~~~~--------------------------------------------------------------- 445 (626)
T KOG2106|consen 429 RWFVLDTETQDLVTIHT--------------------------------------------------------------- 445 (626)
T ss_pred eEEEEecccceeEEEEe---------------------------------------------------------------
Confidence 99999998854443321
Q ss_pred CCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCC-ceeecc--cCCCeeEEEeCCCCCeEEEEeCCCcEE
Q 014755 325 PPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQE-PAAILV--QKDPIRAATWDPTCTRLVLCTGSSHLY 401 (419)
Q Consensus 325 ~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~-~~~~~~--~~~~v~~~~~s~~~~~l~s~~~dg~i~ 401 (419)
...++++++|+|+|.+||.|+.| +.|+||.+.... .....+ +..+|+.+.||+|+++|.+-+.|-.|.
T Consensus 446 -------d~~~ls~v~ysp~G~~lAvgs~d--~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiL 516 (626)
T KOG2106|consen 446 -------DNEQLSVVRYSPDGAFLAVGSHD--NHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGDYEIL 516 (626)
T ss_pred -------cCCceEEEEEcCCCCEEEEecCC--CeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEeccCceEEE
Confidence 13358999999999999999999 999999987644 333333 568999999999999999999999999
Q ss_pred EeecC
Q 014755 402 MWTPS 406 (419)
Q Consensus 402 vw~~~ 406 (419)
.|...
T Consensus 517 yW~~~ 521 (626)
T KOG2106|consen 517 YWKPS 521 (626)
T ss_pred EEccc
Confidence 99443
No 118
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.96 E-value=9.8e-28 Score=206.15 Aligned_cols=324 Identities=16% Similarity=0.277 Sum_probs=237.8
Q ss_pred hhcccccC---eEEcCCC---CEEEEEe-CCeEEEEecCCCc------------------------EEE--------Eee
Q 014755 5 EAYKQTGP---SCFSPNA---RYIAVAV-DYRLVVRDAHSFK------------------------VVQ--------LFS 45 (419)
Q Consensus 5 ~~~~~~~~---~~~s~d~---~~la~~~-~~~i~i~~~~~~~------------------------~~~--------~~~ 45 (419)
+..||... ++|..-+ -+||++| |..|+||.+.-+. .+. ..+
T Consensus 186 el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~G 265 (764)
T KOG1063|consen 186 ELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMG 265 (764)
T ss_pred EeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhhcC
Confidence 34577665 6776644 4778888 7779999764211 011 237
Q ss_pred cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC--cceeee-----ecCCccEeEEEECCCCCEEEEEecCCCeEEEE
Q 014755 46 CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP--EWTCKI-----DEGLAGIAYARWSPDSRHILTTSDFQLRLTVW 118 (419)
Q Consensus 46 ~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~--~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iw 118 (419)
|.+.|+++.|+|.+..|++++.| .++.+|...+. -.+..+ .+.........|+|++..+++-+..+ ..++|
T Consensus 266 HeDWV~sv~W~p~~~~LLSASaD-ksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~G-g~hlW 343 (764)
T KOG1063|consen 266 HEDWVYSVWWHPEGLDLLSASAD-KSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTG-GFHLW 343 (764)
T ss_pred cccceEEEEEccchhhheecccC-cceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccC-cEEEE
Confidence 99999999999999999999988 69999998654 232222 22334578899999999888888776 89999
Q ss_pred EcCC-CeEEE---eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEecc----CCeEEEEEeccccceeeeeECCCCC
Q 014755 119 SLLN-TACVH---VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCH----TWEIMGVFAVDTLDLADIEWSPDDS 190 (419)
Q Consensus 119 d~~~-~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~----~~~~~~~~~~~~~~v~~~~~~~~~~ 190 (419)
..+. ..... +.+|-..|..++|+|.|.+|++++.| .+-+++-.- ++.++..-+.|...+.|++|-+..-
T Consensus 344 kt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~D---QTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~ 420 (764)
T KOG1063|consen 344 KTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLD---QTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDL 420 (764)
T ss_pred eccCccceeeccccccccccceeeeecCCCCEEEEeccc---cceeeecccccccceeeecccccccccceeeehccCCc
Confidence 8433 22222 67888999999999999999999988 577776543 2455666677888899999987432
Q ss_pred eEEEEcCCCCceEEEEcCC-----------C---------------------------------ce--------------
Q 014755 191 AIVIWDSPLEYKVLIYSPD-----------G---------------------------------RC-------------- 212 (419)
Q Consensus 191 ~l~~~~~~~~~~i~~~d~~-----------~---------------------------------~~-------------- 212 (419)
.++. +....-+++|+.. + ..
T Consensus 421 ~FVS--gAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~ 498 (764)
T KOG1063|consen 421 QFVS--GADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPC 498 (764)
T ss_pred eeee--cccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCch
Confidence 2322 3434455555531 0 00
Q ss_pred -------------------EEEEeecCCCCceeEEEEccCCCeEEEEEecC-----cEEEEEcCCceeeeeecccccccC
Q 014755 213 -------------------LLKYQAYESGLGVKSISWSPCGQFLAVGSYDQ-----TLRVLNHLTWKTFAEFMHLSTVRG 268 (419)
Q Consensus 213 -------------------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~-----~i~v~d~~~~~~~~~~~~~~~~~~ 268 (419)
++++. .|...|++++.+|+|+++|++.... .|++|+..+....+.+
T Consensus 499 ~L~ePP~EdqLq~~tLwPEv~KLY--GHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L-------- 568 (764)
T KOG1063|consen 499 ELTEPPTEDQLQQNTLWPEVHKLY--GHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQEL-------- 568 (764)
T ss_pred hccCCChHHHHHHhccchhhHHhc--cCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhhee--------
Confidence 00011 1345899999999999999987543 5899998876655543
Q ss_pred CCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEE
Q 014755 269 PCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYI 348 (419)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l 348 (419)
++|.-.|+.++|||||++|
T Consensus 569 -------------------------------------------------------------~~HsLTVT~l~FSpdg~~L 587 (764)
T KOG1063|consen 569 -------------------------------------------------------------EGHSLTVTRLAFSPDGRYL 587 (764)
T ss_pred -------------------------------------------------------------cccceEEEEEEECCCCcEE
Confidence 3588889999999999999
Q ss_pred EEecCCCCceEEEeeccCCCce-----eecccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCC
Q 014755 349 CTRNDSMPTTLWIWDICRQEPA-----AILVQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGA 408 (419)
Q Consensus 349 ~~~~~d~~~~i~iwd~~~~~~~-----~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~ 408 (419)
++.+.| +++.+|........ ....|..-|++..|+|++.++|++|.|.+|++|.....
T Consensus 588 LsvsRD--Rt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~ 650 (764)
T KOG1063|consen 588 LSVSRD--RTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDL 650 (764)
T ss_pred EEeecC--ceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCc
Confidence 999999 99999998654322 12359999999999999999999999999999999865
No 119
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.96 E-value=3.6e-27 Score=208.99 Aligned_cols=279 Identities=18% Similarity=0.256 Sum_probs=226.7
Q ss_pred eecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC-cceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC
Q 014755 44 FSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP-EWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN 122 (419)
Q Consensus 44 ~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~ 122 (419)
+.|...-+.++|.|+|.+|.+++.| |.|++|+.... +....+..+...|.+++- .+.++++++.++ +|.+|....
T Consensus 10 yaht~G~t~i~~d~~gefi~tcgsd-g~ir~~~~~sd~e~P~ti~~~g~~v~~ia~--~s~~f~~~s~~~-tv~~y~fps 85 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDGEFICTCGSD-GDIRKWKTNSDEEEPETIDISGELVSSIAC--YSNHFLTGSEQN-TVLRYKFPS 85 (933)
T ss_pred hhccCceEEEEEcCCCCEEEEecCC-CceEEeecCCcccCCchhhccCceeEEEee--cccceEEeeccc-eEEEeeCCC
Confidence 5688889999999999999999987 89999998766 555555446677777765 445899999887 999999998
Q ss_pred CeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCc
Q 014755 123 TACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEY 201 (419)
Q Consensus 123 ~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~ 201 (419)
++.-. +.....++.+++++.+|++++.|+.| -.|++.++........+.+|..+|.++.|+|++.+|++ ...+|
T Consensus 86 ~~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD---~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAv--ss~dG 160 (933)
T KOG1274|consen 86 GEEDTILARFTLPIRDLAVSGSGKMIAAGSDD---TAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAV--SSCDG 160 (933)
T ss_pred CCccceeeeeeccceEEEEecCCcEEEeecCc---eeEEEEeccccchheeecccCCceeeeeEcCCCCEEEE--EecCc
Confidence 87764 66667788999999999999999987 68999999999999999999999999999999999999 56699
Q ss_pred eEEEEcC-CCceEEEEeecC------CCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccce
Q 014755 202 KVLIYSP-DGRCLLKYQAYE------SGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAV 274 (419)
Q Consensus 202 ~i~~~d~-~~~~~~~~~~~~------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 274 (419)
.|++||+ ++.+...+.... ....+..++|+|+|..++....|+.|++|+..+++....+...
T Consensus 161 ~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~----------- 229 (933)
T KOG1274|consen 161 KVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDK----------- 229 (933)
T ss_pred eEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeeccc-----------
Confidence 9999999 776665554321 1235778999999888888888999999999998887766411
Q ss_pred eccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCC
Q 014755 275 FKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDS 354 (419)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d 354 (419)
.+...+.++.|||+|+|||+++.+
T Consensus 230 --------------------------------------------------------~~ss~~~~~~wsPnG~YiAAs~~~ 253 (933)
T KOG1274|consen 230 --------------------------------------------------------LSSSKFSDLQWSPNGKYIAASTLD 253 (933)
T ss_pred --------------------------------------------------------ccccceEEEEEcCCCcEEeeeccC
Confidence 133338899999999999999998
Q ss_pred CCceEEEeeccCCCceeecccCCCeeEEEeCCCCCeEEEEeCCCcEEEe
Q 014755 355 MPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCTRLVLCTGSSHLYMW 403 (419)
Q Consensus 355 ~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw 403 (419)
|.|.|||.++-+. ......|.+++|.|++.-+-.-...|...+|
T Consensus 254 --g~I~vWnv~t~~~---~~~~~~Vc~~aw~p~~n~it~~~~~g~~~~~ 297 (933)
T KOG1274|consen 254 --GQILVWNVDTHER---HEFKRAVCCEAWKPNANAITLITALGTLGVS 297 (933)
T ss_pred --CcEEEEecccchh---ccccceeEEEecCCCCCeeEEEeeccccccC
Confidence 9999999998222 2345689999999999866544445554444
No 120
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.96 E-value=1.3e-27 Score=196.21 Aligned_cols=298 Identities=12% Similarity=0.179 Sum_probs=229.6
Q ss_pred CeEEEEecCCCcEEEEeecCcc--eeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEE
Q 014755 28 YRLVVRDAHSFKVVQLFSCLDK--ISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHI 105 (419)
Q Consensus 28 ~~i~i~~~~~~~~~~~~~~~~~--v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 105 (419)
.++.+||+.+|.....++.... -.++..- .+.+++++...+..+.+|.+..........--.++|.+++-+|+|.+|
T Consensus 18 ~~~~~~dl~TGt~~~~ykg~~~a~~~sl~~l-~~~yllsaq~~rp~l~vw~i~k~~~~~q~~v~Pg~v~al~s~n~G~~l 96 (476)
T KOG0646|consen 18 INCIVWDLRTGTSLLQYKGSYLAQAASLTAL-NNEYLLSAQLKRPLLHVWEILKKDQVVQYIVLPGPVHALASSNLGYFL 96 (476)
T ss_pred cceeEEecCCCceeEEecCcccccchhhhhh-chhheeeecccCccccccccCchhhhhhhcccccceeeeecCCCceEE
Confidence 4589999999998877764421 1111111 346888887766799999987665544333456789999999999999
Q ss_pred EEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC---------CeEEEEEec
Q 014755 106 LTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT---------WEIMGVFAV 175 (419)
Q Consensus 106 ~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~---------~~~~~~~~~ 175 (419)
+.++..+ .|++|.+.+|..+. +..|-..++++.|+-||.+|++++.| |.|.+|.+.. -+++..+..
T Consensus 97 ~ag~i~g-~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskD---g~V~vW~l~~lv~a~~~~~~~p~~~f~~ 172 (476)
T KOG0646|consen 97 LAGTISG-NLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKD---GAVLVWLLTDLVSADNDHSVKPLHIFSD 172 (476)
T ss_pred EeecccC-cEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCC---ccEEEEEEEeecccccCCCccceeeecc
Confidence 8887766 99999999999888 88899999999999999999999998 8999998742 456778889
Q ss_pred cccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCc
Q 014755 176 DTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTW 254 (419)
Q Consensus 176 ~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~ 254 (419)
|.-+|+.+...+.|..-.++..+.|.++++||+ .|..+.++.... .+.+++.+|-++.++.|+.+|.|.+.++...
T Consensus 173 HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~---si~av~lDpae~~~yiGt~~G~I~~~~~~~~ 249 (476)
T KOG0646|consen 173 HTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFPS---SIKAVALDPAERVVYIGTEEGKIFQNLLFKL 249 (476)
T ss_pred CcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecCC---cceeEEEcccccEEEecCCcceEEeeehhcC
Confidence 999999999887654333333788999999999 788887776554 6999999999999999999999999887653
Q ss_pred eeeee-ecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCC
Q 014755 255 KTFAE-FMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPK 333 (419)
Q Consensus 255 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (419)
..... +.. ..+. ........+.+|.
T Consensus 250 ~~~~~~v~~----------k~~~--------------------------------------------~~~t~~~~~~Gh~ 275 (476)
T KOG0646|consen 250 SGQSAGVNQ----------KGRH--------------------------------------------EENTQINVLVGHE 275 (476)
T ss_pred Ccccccccc----------cccc--------------------------------------------cccceeeeecccc
Confidence 32110 000 0000 0000111134677
Q ss_pred c--ceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc-cCCCeeEEEeCCCCC
Q 014755 334 Q--GIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV-QKDPIRAATWDPTCT 389 (419)
Q Consensus 334 ~--~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~ 389 (419)
+ .|+|++++-||.+|++|+.| |.++|||+.+.++++.+. ..++|+.+.+.|-.+
T Consensus 276 ~~~~ITcLais~DgtlLlSGd~d--g~VcvWdi~S~Q~iRtl~~~kgpVtnL~i~~~~~ 332 (476)
T KOG0646|consen 276 NESAITCLAISTDGTLLLSGDED--GKVCVWDIYSKQCIRTLQTSKGPVTNLQINPLER 332 (476)
T ss_pred CCcceeEEEEecCccEEEeeCCC--CCEEEEecchHHHHHHHhhhccccceeEeecccc
Confidence 7 89999999999999999999 999999999999998887 788999999966544
No 121
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.96 E-value=7.1e-28 Score=197.82 Aligned_cols=271 Identities=13% Similarity=0.151 Sum_probs=216.4
Q ss_pred EEEeccCCeEEEEEccCCcceeeeecC-CccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEE
Q 014755 63 LCGLYKRLMIQAWSLTQPEWTCKIDEG-LAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAF 140 (419)
Q Consensus 63 ~~~~~~~g~i~iw~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~ 140 (419)
.+++.|..++.+||+.+|....++++. ...-.++.. -.+++++++......+.+|.+....... ....++++.+++-
T Consensus 11 sssS~d~~~~~~~dl~TGt~~~~ykg~~~a~~~sl~~-l~~~yllsaq~~rp~l~vw~i~k~~~~~q~~v~Pg~v~al~s 89 (476)
T KOG0646|consen 11 SSSSFDPINCIVWDLRTGTSLLQYKGSYLAQAASLTA-LNNEYLLSAQLKRPLLHVWEILKKDQVVQYIVLPGPVHALAS 89 (476)
T ss_pred eccCCCCcceeEEecCCCceeEEecCcccccchhhhh-hchhheeeecccCccccccccCchhhhhhhcccccceeeeec
Confidence 344556567999999999888777665 222222221 1447888887655589999987755444 4456678899999
Q ss_pred ccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCC----------C
Q 014755 141 TQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPD----------G 210 (419)
Q Consensus 141 ~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~----------~ 210 (419)
+|+|.+++.++.. |.+++|.+.+|..+..+..|-..|+++.|+.||..+++ ++.||.|.+|++. -
T Consensus 90 ~n~G~~l~ag~i~---g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiT--gskDg~V~vW~l~~lv~a~~~~~~ 164 (476)
T KOG0646|consen 90 SNLGYFLLAGTIS---GNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIIT--GSKDGAVLVWLLTDLVSADNDHSV 164 (476)
T ss_pred CCCceEEEeeccc---CcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEe--cCCCccEEEEEEEeecccccCCCc
Confidence 9999999888664 89999999999999999999999999999999999999 8899999999871 1
Q ss_pred ceEEEEeecCCCCceeEEEEccCC--CeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCccccccee
Q 014755 211 RCLLKYQAYESGLGVKSISWSPCG--QFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSE 288 (419)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~s~~~--~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (419)
++++.+..|.- +|+++...+.| .++++++.|.++++||+..+..+.++..+
T Consensus 165 ~p~~~f~~Htl--sITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp------------------------- 217 (476)
T KOG0646|consen 165 KPLHIFSDHTL--SITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFP------------------------- 217 (476)
T ss_pred cceeeeccCcc--eeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecC-------------------------
Confidence 34555555544 89999887754 58999999999999999999888776422
Q ss_pred eeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCC
Q 014755 289 LCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQE 368 (419)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~ 368 (419)
..+.+++.+|-++.++.|+.+ |.|.+.++..-.
T Consensus 218 ---------------------------------------------~si~av~lDpae~~~yiGt~~--G~I~~~~~~~~~ 250 (476)
T KOG0646|consen 218 ---------------------------------------------SSIKAVALDPAERVVYIGTEE--GKIFQNLLFKLS 250 (476)
T ss_pred ---------------------------------------------CcceeEEEcccccEEEecCCc--ceEEeeehhcCC
Confidence 236899999999999999999 999998875422
Q ss_pred -----------------ceeecccCC--CeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEEec
Q 014755 369 -----------------PAAILVQKD--PIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCVSN 413 (419)
Q Consensus 369 -----------------~~~~~~~~~--~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~ 413 (419)
...+.+|.+ +|+|++.+-||..|++|+.||.|.|||+.+.+++++
T Consensus 251 ~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRt 314 (476)
T KOG0646|consen 251 GQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRT 314 (476)
T ss_pred cccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHHHHHH
Confidence 123346887 999999999999999999999999999998877654
No 122
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.96 E-value=8.4e-26 Score=168.78 Aligned_cols=278 Identities=12% Similarity=0.188 Sum_probs=214.5
Q ss_pred CeEEcCCCCEEEEEe-CCeEEEE------ecCCCc----------EEEEeecCcceeEEEEecCCCeEEEEeccCCeEEE
Q 014755 12 PSCFSPNARYIAVAV-DYRLVVR------DAHSFK----------VVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQA 74 (419)
Q Consensus 12 ~~~~s~d~~~la~~~-~~~i~i~------~~~~~~----------~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~i 74 (419)
.++|.|.|.+.|+|+ ..+++|- |+..+. +.+...|.+.|.|.+|||+|++|++|+.| .+|++
T Consensus 37 av~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgsnd-k~ik~ 115 (350)
T KOG0641|consen 37 AVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGSND-KTIKV 115 (350)
T ss_pred eEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecCCC-ceEEE
Confidence 389999999999998 4556653 332111 11223488999999999999999999977 69999
Q ss_pred EEccCCcc-----eeeeecCCccEeEEEECC----CCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCC
Q 014755 75 WSLTQPEW-----TCKIDEGLAGIAYARWSP----DSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDG 144 (419)
Q Consensus 75 w~~~~~~~-----~~~~~~~~~~v~~~~~~~----~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~ 144 (419)
...+...+ ...+..|.+.|..++|.. .+..|++++..+..|++-|...|+... +.+|.+.+.++ ++-++
T Consensus 116 l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtghilal-yswn~ 194 (350)
T KOG0641|consen 116 LPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGHILAL-YSWNG 194 (350)
T ss_pred EecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecCCcccEEEE-EEecC
Confidence 87654321 234667889999999965 356677777655588888999998887 88888887554 34467
Q ss_pred CEEEEEeecCCCCeEEEEeccCCeEEEEEec-------cccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEE
Q 014755 145 KFAAICTRRDCKDYINLLSCHTWEIMGVFAV-------DTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKY 216 (419)
Q Consensus 145 ~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~ 216 (419)
.++++++.| .+|++||++-...+..+.. ....|.+++..|.|++++. +..|....+||+ .++.++.+
T Consensus 195 ~m~~sgsqd---ktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~s--g~~dssc~lydirg~r~iq~f 269 (350)
T KOG0641|consen 195 AMFASGSQD---KTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLAS--GHADSSCMLYDIRGGRMIQRF 269 (350)
T ss_pred cEEEccCCC---ceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeee--ccCCCceEEEEeeCCceeeee
Confidence 899999987 7999999998887776643 2356899999999999998 788999999999 77888888
Q ss_pred eecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccc
Q 014755 217 QAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFI 296 (419)
Q Consensus 217 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (419)
..|.. .|.++.|+|...|+++++.|..|++-|+.. ....++. + +..
T Consensus 270 ~phsa--dir~vrfsp~a~yllt~syd~~ikltdlqg-dla~el~----~------~vv--------------------- 315 (350)
T KOG0641|consen 270 HPHSA--DIRCVRFSPGAHYLLTCSYDMKIKLTDLQG-DLAHELP----I------MVV--------------------- 315 (350)
T ss_pred CCCcc--ceeEEEeCCCceEEEEecccceEEEeeccc-chhhcCc----e------EEE---------------------
Confidence 77766 899999999999999999999999999763 2212111 0 000
Q ss_pred cccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeecc
Q 014755 297 QGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDIC 365 (419)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~ 365 (419)
..|...+..+.|+|..--+++.+.| .++.+|-+.
T Consensus 316 ---------------------------------~ehkdk~i~~rwh~~d~sfisssad--kt~tlwa~~ 349 (350)
T KOG0641|consen 316 ---------------------------------AEHKDKAIQCRWHPQDFSFISSSAD--KTATLWALN 349 (350)
T ss_pred ---------------------------------EeccCceEEEEecCccceeeeccCc--ceEEEeccC
Confidence 1377778889999998888888888 999999764
No 123
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=3.4e-28 Score=207.52 Aligned_cols=275 Identities=15% Similarity=0.230 Sum_probs=228.5
Q ss_pred EEEEe-cCCCeEEEEeccCCeEEEEEccCCc------ceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCe
Q 014755 52 YIEWA-LDSEYILCGLYKRLMIQAWSLTQPE------WTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTA 124 (419)
Q Consensus 52 ~~~~s-~~~~~l~~~~~~~g~i~iw~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~ 124 (419)
.+..+ |.+++|++|+.| |.|++|+..... ....+..|...|..++...+++.|++++.|. +|++|+...+.
T Consensus 29 ~Lq~da~~~ryLfTgGRD-g~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDt-TVK~W~~~~~~ 106 (735)
T KOG0308|consen 29 ALQLDAPNGRYLFTGGRD-GIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDT-TVKVWNAHKDN 106 (735)
T ss_pred hccccCCCCceEEecCCC-ceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCc-eEEEeecccCc
Confidence 44444 467789999987 999999986442 3556778889999999999999999999998 99999998863
Q ss_pred --EEE-eccCCCCeeeEEE-ccCCCEEEEEeecCCCCeEEEEeccCCeE--EE--------EEe-ccccceeeeeECCCC
Q 014755 125 --CVH-VQSPKHASKGVAF-TQDGKFAAICTRRDCKDYINLLSCHTWEI--MG--------VFA-VDTLDLADIEWSPDD 189 (419)
Q Consensus 125 --~~~-~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~g~v~i~d~~~~~~--~~--------~~~-~~~~~v~~~~~~~~~ 189 (419)
+.. +..|...|.|+++ .++...+|+|+-| +.|.+||++++.. +. .+. ++...|++++.++.|
T Consensus 107 ~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD---~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~ 183 (735)
T KOG0308|consen 107 TFCMSTIRTHKDYVKCLAYIAKNNELVASGGLD---RKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTG 183 (735)
T ss_pred chhHhhhhcccchheeeeecccCceeEEecCCC---ccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcc
Confidence 444 7889999999999 7888889999887 8999999997732 22 222 566789999999999
Q ss_pred CeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccC
Q 014755 190 SAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRG 268 (419)
Q Consensus 190 ~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~ 268 (419)
..++. ++.++.+++||. +++.+..+.+|.. .|..+..++||..+++++.||+|++||+...+++.++.
T Consensus 184 t~ivs--Ggtek~lr~wDprt~~kimkLrGHTd--NVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~------- 252 (735)
T KOG0308|consen 184 TIIVS--GGTEKDLRLWDPRTCKKIMKLRGHTD--NVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYI------- 252 (735)
T ss_pred eEEEe--cCcccceEEeccccccceeeeecccc--ceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEE-------
Confidence 66665 777899999999 8888888888877 89999999999999999999999999999988888764
Q ss_pred CCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEE
Q 014755 269 PCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYI 348 (419)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l 348 (419)
.|...|.++..+|+-..+
T Consensus 253 --------------------------------------------------------------vH~e~VWaL~~~~sf~~v 270 (735)
T KOG0308|consen 253 --------------------------------------------------------------VHKEGVWALQSSPSFTHV 270 (735)
T ss_pred --------------------------------------------------------------eccCceEEEeeCCCcceE
Confidence 366668999999999999
Q ss_pred EEecCCCCceEEEeeccCC-CceeecccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 349 CTRNDSMPTTLWIWDICRQ-EPAAILVQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 349 ~~~~~d~~~~i~iwd~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
++|+.| |.|+.=|+.+. +...+.....+|..+..+.+.+-+-+++.|+.|+-|..+
T Consensus 271 YsG~rd--~~i~~Tdl~n~~~~tlick~daPv~~l~~~~~~~~~WvtTtds~I~rW~~~ 327 (735)
T KOG0308|consen 271 YSGGRD--GNIYRTDLRNPAKSTLICKEDAPVLKLHLHEHDNSVWVTTTDSSIKRWKLE 327 (735)
T ss_pred EecCCC--CcEEecccCCchhheEeecCCCchhhhhhccccCCceeeeccccceecCCc
Confidence 999999 99999999984 444555677788888887666655667889999999876
No 124
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.96 E-value=4.2e-25 Score=189.70 Aligned_cols=384 Identities=15% Similarity=0.151 Sum_probs=255.9
Q ss_pred cccCeEEcCCCCEEEEEeCCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceee--
Q 014755 9 QTGPSCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCK-- 85 (419)
Q Consensus 9 ~~~~~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~-- 85 (419)
+...++|++.++++-++.++.|.-||+.+++....+. ..+.|++++.+|.+..++.|+.| |.+..++...++....
T Consensus 71 sIE~L~W~e~~RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~Igcdd-Gvl~~~s~~p~~I~~~r~ 149 (691)
T KOG2048|consen 71 SIESLAWAEGGRLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDD-GVLYDFSIGPDKITYKRS 149 (691)
T ss_pred ceeeEEEccCCeEEeecCCceEEEEecccCceeEEecCCCcceeEEEeCCccceEEeecCC-ceEEEEecCCceEEEEee
Confidence 4444999987777777779999999999999888776 56789999999999999999865 8888888877754433
Q ss_pred eecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-----eccCCC----CeeeEEEccCCCEEEEEeecCCC
Q 014755 86 IDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-----VQSPKH----ASKGVAFTQDGKFAAICTRRDCK 156 (419)
Q Consensus 86 ~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-----~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~ 156 (419)
+...++.+.++.|+|++..++.|+.|+ .|++||+..+.... +..... -|.++.|-.++ .|++|...
T Consensus 150 l~rq~sRvLslsw~~~~~~i~~Gs~Dg-~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~-tI~sgDS~--- 224 (691)
T KOG2048|consen 150 LMRQKSRVLSLSWNPTGTKIAGGSIDG-VIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDS-TIASGDSA--- 224 (691)
T ss_pred cccccceEEEEEecCCccEEEecccCc-eEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecC-cEEEecCC---
Confidence 444568899999999999999999988 99999999987766 222222 23667776554 66666543
Q ss_pred CeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCc-----eEEEEeecCCCCceeEEEEc
Q 014755 157 DYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGR-----CLLKYQAYESGLGVKSISWS 231 (419)
Q Consensus 157 g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~-----~~~~~~~~~~~~~v~~~~~s 231 (419)
|+|.+||...+.+++....|...|.+++..+++..+++ ++.|+.+..|..++. .......|.+ .+.+++..
T Consensus 225 G~V~FWd~~~gTLiqS~~~h~adVl~Lav~~~~d~vfs--aGvd~~ii~~~~~~~~~~wv~~~~r~~h~h--dvrs~av~ 300 (691)
T KOG2048|consen 225 GTVTFWDSIFGTLIQSHSCHDADVLALAVADNEDRVFS--AGVDPKIIQYSLTTNKSEWVINSRRDLHAH--DVRSMAVI 300 (691)
T ss_pred ceEEEEcccCcchhhhhhhhhcceeEEEEcCCCCeEEE--ccCCCceEEEEecCCccceeeeccccCCcc--cceeeeee
Confidence 89999999999999999999999999999999999998 777999999988433 1222334455 79999998
Q ss_pred cCCCeEEEEEecCcEEEEEcCCceeeeeec-----ccccccC-CCc--cceecc--------------------------
Q 014755 232 PCGQFLAVGSYDQTLRVLNHLTWKTFAEFM-----HLSTVRG-PCF--PAVFKE-------------------------- 277 (419)
Q Consensus 232 ~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-----~~~~~~~-~~~--~~~~~~-------------------------- 277 (419)
++ .+++|+.|.++.+-.....+...... +...+.. +.. .+.|.+
T Consensus 301 ~~--~l~sgG~d~~l~i~~s~~~~~~~h~~~~~~p~~~~v~~a~~~~L~~~w~~h~v~lwrlGS~~~~g~~~~~~Llkl~ 378 (691)
T KOG2048|consen 301 EN--ALISGGRDFTLAICSSREFKNMDHRQKNLFPASDRVSVAPENRLLVLWKAHGVDLWRLGSVILQGEYNYIHLLKLF 378 (691)
T ss_pred cc--eEEecceeeEEEEccccccCchhhhccccccccceeecCccceEEEEeccccccceeccCcccccccChhhheeee
Confidence 77 88889988887765433211000000 0000000 000 000000
Q ss_pred ----------CCCccccccee--------eeccCccccc----------------cccccCCceEEEEE-----eccCCC
Q 014755 278 ----------VDEPLQLDMSE--------LCLNDDFIQG----------------NSDATNGHIKVRYE-----VMEIPI 318 (419)
Q Consensus 278 ----------~~~~~~~~~~~--------~~~~~~~~~~----------------~~~~~~~~~~~~~~-----~~~~~~ 318 (419)
.-+|+|.-+.. ..+....... .....+++...... +.....
T Consensus 379 ~k~~~nIs~~aiSPdg~~Ia~st~~~~~iy~L~~~~~vk~~~v~~~~~~~~~a~~i~ftid~~k~~~~s~~~~~le~~el 458 (691)
T KOG2048|consen 379 TKEKENISCAAISPDGNLIAISTVSRTKIYRLQPDPNVKVINVDDVPLALLDASAISFTIDKNKLFLVSKNIFSLEEFEL 458 (691)
T ss_pred cCCccceeeeccCCCCCEEEEeeccceEEEEeccCcceeEEEeccchhhhccceeeEEEecCceEEEEecccceeEEEEe
Confidence 00122211000 0000000000 00000000000000 001111
Q ss_pred CCCCCCCCCCC--CCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec-ccCCCeeEEEeCC-CCCeEEEE
Q 014755 319 SLPFQKPPTDK--PNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL-VQKDPIRAATWDP-TCTRLVLC 394 (419)
Q Consensus 319 ~~~~~~~~~~~--~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~-~~~~l~s~ 394 (419)
..+..+..... .+....|+.+..||+|+|||+.+.+ |.|.+|++++++...+. .-...|+.++|+| +-+.|+.+
T Consensus 459 ~~ps~kel~~~~~~~~~~~I~~l~~SsdG~yiaa~~t~--g~I~v~nl~~~~~~~l~~rln~~vTa~~~~~~~~~~lvva 536 (691)
T KOG2048|consen 459 ETPSFKELKSIQSQAKCPSISRLVVSSDGNYIAAISTR--GQIFVYNLETLESHLLKVRLNIDVTAAAFSPFVRNRLVVA 536 (691)
T ss_pred cCcchhhhhccccccCCCcceeEEEcCCCCEEEEEecc--ceEEEEEcccceeecchhccCcceeeeeccccccCcEEEE
Confidence 11222221111 1345679999999999999999988 99999999998877766 3568899999995 45588889
Q ss_pred eCCCcEEEeecC
Q 014755 395 TGSSHLYMWTPS 406 (419)
Q Consensus 395 ~~dg~i~vw~~~ 406 (419)
..|+.+.-||++
T Consensus 537 ts~nQv~efdi~ 548 (691)
T KOG2048|consen 537 TSNNQVFEFDIE 548 (691)
T ss_pred ecCCeEEEEecc
Confidence 999999999995
No 125
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.96 E-value=1.5e-26 Score=199.02 Aligned_cols=273 Identities=12% Similarity=0.137 Sum_probs=227.5
Q ss_pred eecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCccee--eeecCCccEeE-EEECC-CCCEEEEEecCCCeEEEEE
Q 014755 44 FSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTC--KIDEGLAGIAY-ARWSP-DSRHILTTSDFQLRLTVWS 119 (419)
Q Consensus 44 ~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~--~~~~~~~~v~~-~~~~~-~~~~l~~~~~~~~~i~iwd 119 (419)
.+|...|..++..+.. .+++++.| |++++|+-...+... .+.+|.+-|.. +++.+ ++-.+++++.|. .+.+|.
T Consensus 11 ~gH~~DVr~v~~~~~~-~i~s~sRd-~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~-~i~v~~ 87 (745)
T KOG0301|consen 11 EGHKSDVRAVAVTDGV-CIISGSRD-GTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDT-TIIVFK 87 (745)
T ss_pred ccCccchheeEecCCe-EEeecCCC-CceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccc-eEEEEe
Confidence 3588889888877544 67788766 899999987766543 34556666665 77775 445688999988 999999
Q ss_pred cCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCC
Q 014755 120 LLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSP 198 (419)
Q Consensus 120 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 198 (419)
+.+..+.. +.+|+..|.+++...++. +++++.| .++++|-. +++...+.+|+..|.++..-|.+ .+++ ++
T Consensus 88 ~~~~~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD---~TakvW~~--~~l~~~l~gH~asVWAv~~l~e~-~~vT--gs 158 (745)
T KOG0301|consen 88 LSQAEPLYTLKGHKSNVCSLSIGEDGT-LISGSWD---STAKVWRI--GELVYSLQGHTASVWAVASLPEN-TYVT--GS 158 (745)
T ss_pred cCCCCchhhhhccccceeeeecCCcCc-eEecccc---cceEEecc--hhhhcccCCcchheeeeeecCCC-cEEe--cc
Confidence 99999988 999999999999888887 8999998 79999976 45666799999999999999998 4555 78
Q ss_pred CCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccC
Q 014755 199 LEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEV 278 (419)
Q Consensus 199 ~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (419)
.|..|++|.- ++.++++.+|.+ .|+++++-+++ .+++++.||.|++|++ +|+++.++.
T Consensus 159 aDKtIklWk~-~~~l~tf~gHtD--~VRgL~vl~~~-~flScsNDg~Ir~w~~-~ge~l~~~~----------------- 216 (745)
T KOG0301|consen 159 ADKTIKLWKG-GTLLKTFSGHTD--CVRGLAVLDDS-HFLSCSNDGSIRLWDL-DGEVLLEMH----------------- 216 (745)
T ss_pred CcceeeeccC-Cchhhhhccchh--heeeeEEecCC-CeEeecCCceEEEEec-cCceeeeee-----------------
Confidence 8999999996 888899999887 89999998875 5789999999999998 666666543
Q ss_pred CCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCce
Q 014755 279 DEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTT 358 (419)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~ 358 (419)
+|...|.+++..+++..++++++| ++
T Consensus 217 ----------------------------------------------------ghtn~vYsis~~~~~~~Ivs~gED--rt 242 (745)
T KOG0301|consen 217 ----------------------------------------------------GHTNFVYSISMALSDGLIVSTGED--RT 242 (745)
T ss_pred ----------------------------------------------------ccceEEEEEEecCCCCeEEEecCC--ce
Confidence 577888999988888999999999 99
Q ss_pred EEEeeccCCCceeecccCC-CeeEEEeCCCCCeEEEEeCCCcEEEeecCC
Q 014755 359 LWIWDICRQEPAAILVQKD-PIRAATWDPTCTRLVLCTGSSHLYMWTPSG 407 (419)
Q Consensus 359 i~iwd~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 407 (419)
++||+.. ++.+.+.|.. .|+++.+-++|. +++|+.||.|+||....
T Consensus 243 lriW~~~--e~~q~I~lPttsiWsa~~L~NgD-Ivvg~SDG~VrVfT~~k 289 (745)
T KOG0301|consen 243 LRIWKKD--ECVQVITLPTTSIWSAKVLLNGD-IVVGGSDGRVRVFTVDK 289 (745)
T ss_pred EEEeecC--ceEEEEecCccceEEEEEeeCCC-EEEeccCceEEEEEecc
Confidence 9999976 7778887666 899999999998 66788999999998874
No 126
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.96 E-value=1.3e-26 Score=181.22 Aligned_cols=245 Identities=18% Similarity=0.252 Sum_probs=187.9
Q ss_pred ccCeEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeee
Q 014755 10 TGPSCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKID 87 (419)
Q Consensus 10 ~~~~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~ 87 (419)
..++.||+.|.+||+|. +|.|.|||+.|..+-+.+. |..+|.+++||+||+.|++++.| ..|.+||+..|.+..++
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D-~si~lwDl~~gs~l~ri- 103 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRD-WSIKLWDLLKGSPLKRI- 103 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCC-ceeEEEeccCCCceeEE-
Confidence 44489999999999998 9999999999988777665 99999999999999999999987 79999999999988777
Q ss_pred cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCC-----CeeeEEEccCCCEEEEEeecCCCCeEEEE
Q 014755 88 EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKH-----ASKGVAFTQDGKFAAICTRRDCKDYINLL 162 (419)
Q Consensus 88 ~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~g~v~i~ 162 (419)
....+|+.+.|+|.....+.+.--...-.+.++..+....+..... ...+..|.+.|+++++|... |.+.++
T Consensus 104 rf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsK---Gkllv~ 180 (405)
T KOG1273|consen 104 RFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSK---GKLLVY 180 (405)
T ss_pred EccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCc---ceEEEE
Confidence 4678999999999655444443211145555665543333322211 11444689999999999874 899999
Q ss_pred eccCCeEEEEEeccc-cceeeeeECCCCCeEEEEcCCCCceEEEEcCC-----C---ceE--EEEeecCCCCceeEEEEc
Q 014755 163 SCHTWEIMGVFAVDT-LDLADIEWSPDDSAIVIWDSPLEYKVLIYSPD-----G---RCL--LKYQAYESGLGVKSISWS 231 (419)
Q Consensus 163 d~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~-----~---~~~--~~~~~~~~~~~v~~~~~s 231 (419)
|..+.+++..++... ..|..+.++..|+++++ .+.|+.|+.|+.. | +.. ++++..-+...-.+++||
T Consensus 181 ~a~t~e~vas~rits~~~IK~I~~s~~g~~lii--NtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs 258 (405)
T KOG1273|consen 181 DAETLECVASFRITSVQAIKQIIVSRKGRFLII--NTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFS 258 (405)
T ss_pred ecchheeeeeeeechheeeeEEEEeccCcEEEE--ecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheeec
Confidence 999999998888766 78999999999999998 7889999999872 1 111 111111112245678999
Q ss_pred cCCCeEEEEEe-cCcEEEEEcCCceeeeeec
Q 014755 232 PCGQFLAVGSY-DQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 232 ~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~ 261 (419)
.+|.|++.++. ...++||.-..|..++.+.
T Consensus 259 ~dgeYv~a~s~~aHaLYIWE~~~GsLVKILh 289 (405)
T KOG1273|consen 259 GDGEYVCAGSARAHALYIWEKSIGSLVKILH 289 (405)
T ss_pred CCccEEEeccccceeEEEEecCCcceeeeec
Confidence 99999988874 3579999999999988875
No 127
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.96 E-value=3.7e-27 Score=199.40 Aligned_cols=306 Identities=13% Similarity=0.186 Sum_probs=228.5
Q ss_pred ccccC---eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCe--EEEEeccCCeEEEEEccCCc
Q 014755 8 KQTGP---SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEY--ILCGLYKRLMIQAWSLTQPE 81 (419)
Q Consensus 8 ~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~--l~~~~~~~g~i~iw~~~~~~ 81 (419)
||.+. ++..|.|.+||+|+ ||+|+||.+.||.+++.....+.|.|++|+|.++. ||++-. ..+.|.+..-|.
T Consensus 398 GHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d~~I~~vaw~P~~~~~vLAvA~~--~~~~ivnp~~G~ 475 (733)
T KOG0650|consen 398 GHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFDSEIRSVAWNPLSDLCVLAVAVG--ECVLIVNPIFGD 475 (733)
T ss_pred ccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeecceeEEEEecCCCCceeEEEEec--CceEEeCccccc
Confidence 55554 78899999999999 88999999999999999998899999999997654 444443 356676655442
Q ss_pred ceeeeecCCccEeEEEECCCCCEEEEE---ecCCCeEEEEEcCC---Ce-EEE-eccCCCCeeeEEEccCCCEEEEEeec
Q 014755 82 WTCKIDEGLAGIAYARWSPDSRHILTT---SDFQLRLTVWSLLN---TA-CVH-VQSPKHASKGVAFTQDGKFAAICTRR 153 (419)
Q Consensus 82 ~~~~~~~~~~~v~~~~~~~~~~~l~~~---~~~~~~i~iwd~~~---~~-~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~ 153 (419)
.+..- +....|+.+ +.....+..|.-.. ++ -+. ...+...+..+.|+..|.||++...+
T Consensus 476 ~~e~~-------------~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~ 542 (733)
T KOG0650|consen 476 RLEVG-------------PTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPD 542 (733)
T ss_pred hhhhc-------------chhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccC
Confidence 11110 001111111 11112566675442 11 122 45678889999999999999999988
Q ss_pred CCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEcc
Q 014755 154 DCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSP 232 (419)
Q Consensus 154 ~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~ 232 (419)
++...|.|.++........+....+.+.++.|+|...++++ .+...|++||+ .+..++.+..... .|..++.+|
T Consensus 543 ~~~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfV---aTq~~vRiYdL~kqelvKkL~tg~k--wiS~msihp 617 (733)
T KOG0650|consen 543 SGNKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFV---ATQRSVRIYDLSKQELVKKLLTGSK--WISSMSIHP 617 (733)
T ss_pred CCcceEEEEecccccccCchhhcCCceeEEEecCCCceEEE---EeccceEEEehhHHHHHHHHhcCCe--eeeeeeecC
Confidence 77789999999887777667667788999999999999998 33689999999 6555555544333 799999999
Q ss_pred CCCeEEEEEecCcEEEEEcCCc-eeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEE
Q 014755 233 CGQFLAVGSYDQTLRVLNHLTW-KTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRY 311 (419)
Q Consensus 233 ~~~~l~~~~~d~~i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (419)
.|..|+.++.|+.+..||+.-. ++.+.
T Consensus 618 ~GDnli~gs~d~k~~WfDldlsskPyk~---------------------------------------------------- 645 (733)
T KOG0650|consen 618 NGDNLILGSYDKKMCWFDLDLSSKPYKT---------------------------------------------------- 645 (733)
T ss_pred CCCeEEEecCCCeeEEEEcccCcchhHH----------------------------------------------------
Confidence 9999999999999999998642 22222
Q ss_pred EeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeecc------CCCce----eecccCCC---
Q 014755 312 EVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDIC------RQEPA----AILVQKDP--- 378 (419)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~------~~~~~----~~~~~~~~--- 378 (419)
+..|...+++++|++.=.++|+|+.| |++.|+.-. ...++ .+.+|...
T Consensus 646 -----------------lr~H~~avr~Va~H~ryPLfas~sdD--gtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~ 706 (733)
T KOG0650|consen 646 -----------------LRLHEKAVRSVAFHKRYPLFASGSDD--GTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDL 706 (733)
T ss_pred -----------------hhhhhhhhhhhhhccccceeeeecCC--CcEEEEeeeeehhhhcCCceEeeeeccCceeeccc
Confidence 23477778999999999999999999 999998532 22222 22256655
Q ss_pred -eeEEEeCCCCCeEEEEeCCCcEEEee
Q 014755 379 -IRAATWDPTCTRLVLCTGSSHLYMWT 404 (419)
Q Consensus 379 -v~~~~~s~~~~~l~s~~~dg~i~vw~ 404 (419)
|..+.|+|...+|++++.||+|++|.
T Consensus 707 gVLd~~wHP~qpWLfsAGAd~tirlfT 733 (733)
T KOG0650|consen 707 GVLDTIWHPRQPWLFSAGADGTIRLFT 733 (733)
T ss_pred ceEeecccCCCceEEecCCCceEEeeC
Confidence 88999999999999999999999983
No 128
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.96 E-value=4.1e-26 Score=202.35 Aligned_cols=238 Identities=17% Similarity=0.245 Sum_probs=200.3
Q ss_pred cccccC---eEEcCCCCEEEEEe-CCeEEEEecCCC-cEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC
Q 014755 7 YKQTGP---SCFSPNARYIAVAV-DYRLVVRDAHSF-KVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP 80 (419)
Q Consensus 7 ~~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~-~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~ 80 (419)
+.|... ++|.|+|++|.+++ ++.|++|+.... +.-..+. +...|.+++.. +.+|++++.+ ++|.+|...++
T Consensus 10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~--s~~f~~~s~~-~tv~~y~fps~ 86 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACY--SNHFLTGSEQ-NTVLRYKFPSG 86 (933)
T ss_pred hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeec--ccceEEeecc-ceEEEeeCCCC
Confidence 566665 89999999999987 899999987655 3333333 67777777765 5588998866 89999999999
Q ss_pred cceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeE
Q 014755 81 EWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYI 159 (419)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v 159 (419)
+.-..+....-++.+++|+.+|++++.|++|- .|++.++.+..... +.+|..+|.++.|+|++++||+.+-| |.|
T Consensus 87 ~~~~iL~Rftlp~r~~~v~g~g~~iaagsdD~-~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~d---G~v 162 (933)
T KOG1274|consen 87 EEDTILARFTLPIRDLAVSGSGKMIAAGSDDT-AVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCD---GKV 162 (933)
T ss_pred CccceeeeeeccceEEEEecCCcEEEeecCce-eEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecC---ceE
Confidence 87767777788999999999999999999998 99999999866665 89999999999999999999999887 999
Q ss_pred EEEeccCCeEEEEEecc--------ccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEE
Q 014755 160 NLLSCHTWEIMGVFAVD--------TLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISW 230 (419)
Q Consensus 160 ~i~d~~~~~~~~~~~~~--------~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~ 230 (419)
++||+.++.+...+..- ...+..++|+|++..+++ ...++.|.+|+. .......+........+..++|
T Consensus 163 ~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~--~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~w 240 (933)
T KOG1274|consen 163 QIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAV--PPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQW 240 (933)
T ss_pred EEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEe--eccCCeEEEEccCCceeheeecccccccceEEEEE
Confidence 99999998776665431 345678999999888877 577999999999 7777777776655556999999
Q ss_pred ccCCCeEEEEEecCcEEEEEcCC
Q 014755 231 SPCGQFLAVGSYDQTLRVLNHLT 253 (419)
Q Consensus 231 s~~~~~l~~~~~d~~i~v~d~~~ 253 (419)
+|+|+|||+++.||.|.|||.++
T Consensus 241 sPnG~YiAAs~~~g~I~vWnv~t 263 (933)
T KOG1274|consen 241 SPNGKYIAASTLDGQILVWNVDT 263 (933)
T ss_pred cCCCcEEeeeccCCcEEEEeccc
Confidence 99999999999999999999987
No 129
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=2.9e-26 Score=179.75 Aligned_cols=284 Identities=11% Similarity=0.129 Sum_probs=228.2
Q ss_pred hcccccC---eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEe-ecCcceeEEEEecCCCeEEEEeccCCeEEEEEc---
Q 014755 6 AYKQTGP---SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLF-SCLDKISYIEWALDSEYILCGLYKRLMIQAWSL--- 77 (419)
Q Consensus 6 ~~~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~--- 77 (419)
..||... ++.......+.+++ |.+-+||.+++++++..+ +|.+.|+++.|++.+.++++++.| ++..||..
T Consensus 144 ~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD-~taHIW~~av~ 222 (481)
T KOG0300|consen 144 LEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGD-ETAHIWKAAVN 222 (481)
T ss_pred hcccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCC-cchHHHHHhhc
Confidence 3466555 45555556788888 888999999999988765 599999999999999999999988 79999982
Q ss_pred ---cCC----------------------------------cceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEc
Q 014755 78 ---TQP----------------------------------EWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSL 120 (419)
Q Consensus 78 ---~~~----------------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~ 120 (419)
... .++..+++|...|.+..|...|+.+++++-|. +..+||+
T Consensus 223 ~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDR-TAnlwDV 301 (481)
T KOG0300|consen 223 WEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDR-TANLWDV 301 (481)
T ss_pred CcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccc-cceeeee
Confidence 110 13445678889999999999999999999998 9999999
Q ss_pred CCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC-CeEEEEEeccccceeeeeECCCCCeEEEEcCC
Q 014755 121 LNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT-WEIMGVFAVDTLDLADIEWSPDDSAIVIWDSP 198 (419)
Q Consensus 121 ~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 198 (419)
++++.+. +.+|....+.++-+|..+++++.+.| -+.++||.+. -..+..+++|...|+++.|..+.+.+ . ++
T Consensus 302 Etge~v~~LtGHd~ELtHcstHptQrLVvTsSrD---tTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd~vV-S--gS 375 (481)
T KOG0300|consen 302 ETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRD---TTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDDRVV-S--GS 375 (481)
T ss_pred ccCceeccccCcchhccccccCCcceEEEEeccC---ceeEeccchhhcceeeeecccccceeEEEEecCCcee-e--cC
Confidence 9999999 99999999999999999999999887 7999999985 34577899999999999999877643 3 67
Q ss_pred CCceEEEEcC--CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceec
Q 014755 199 LEYKVLIYSP--DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFK 276 (419)
Q Consensus 199 ~~~~i~~~d~--~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (419)
.|.+|++||+ -...+.++.... +++.++.+..++.|+.--.+..|++||++..+. ..+.
T Consensus 376 DDrTvKvWdLrNMRsplATIRtdS---~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~Rl-aRlP--------------- 436 (481)
T KOG0300|consen 376 DDRTVKVWDLRNMRSPLATIRTDS---PANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRL-ARLP--------------- 436 (481)
T ss_pred CCceEEEeeeccccCcceeeecCC---ccceeEeecCCceEEeccCCceEEEEecCCCcc-ccCC---------------
Confidence 7999999999 334566666543 699999999888999888889999999875332 2221
Q ss_pred cCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCC--eEEEEecCC
Q 014755 277 EVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDS--QYICTRNDS 354 (419)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g--~~l~~~~~d 354 (419)
-....+|...|+|++|..+. .-|++++-|
T Consensus 437 -------------------------------------------------rtsRqgHrRMV~c~AW~eehp~cnLftcGFD 467 (481)
T KOG0300|consen 437 -------------------------------------------------RTSRQGHRRMVTCCAWLEEHPACNLFTCGFD 467 (481)
T ss_pred -------------------------------------------------cccccccceeeeeeeccccCccccccccccc
Confidence 11134688899999997553 236677777
Q ss_pred CCceEEEeeccCC
Q 014755 355 MPTTLWIWDICRQ 367 (419)
Q Consensus 355 ~~~~i~iwd~~~~ 367 (419)
..+.-|.+...
T Consensus 468 --R~v~gW~in~p 478 (481)
T KOG0300|consen 468 --RMVAGWKINTP 478 (481)
T ss_pred --ceeeeeEeccc
Confidence 99999988754
No 130
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.95 E-value=1.6e-26 Score=197.11 Aligned_cols=152 Identities=9% Similarity=0.051 Sum_probs=112.4
Q ss_pred eEEcC-CCCEEEEEe-CCeEEEEecCCCcEEE------Eeec-CcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcce
Q 014755 13 SCFSP-NARYIAVAV-DYRLVVRDAHSFKVVQ------LFSC-LDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWT 83 (419)
Q Consensus 13 ~~~s~-d~~~la~~~-~~~i~i~~~~~~~~~~------~~~~-~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~ 83 (419)
+.||| +..+||+++ |..|+||.+..+.... .++| .-.|.++.|+|...-|++.+.. |.++|||+.+++..
T Consensus 85 l~FspF~D~LLAT~S~D~~VKiW~lp~g~~q~LSape~~~g~~~~~vE~l~fHpTaDgil~s~a~-g~v~i~D~stqk~~ 163 (1012)
T KOG1445|consen 85 LGFSPFADELLATCSRDEPVKIWKLPRGHSQKLSAPEIDVGGGNVIVECLRFHPTADGILASGAH-GSVYITDISTQKTA 163 (1012)
T ss_pred cCccccchhhhhcccCCCeeEEEecCCCcccccCCcceeecCCceEEEEeecccCcCceEEeccC-ceEEEEEcccCcee
Confidence 56898 556899999 7789999998543222 2333 3468999999965555544444 89999999999999
Q ss_pred eeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC-CeEEE-eccCCCCe-eeEEEccCCCEEEEEeecC-CCCeE
Q 014755 84 CKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN-TACVH-VQSPKHAS-KGVAFTQDGKFAAICTRRD-CKDYI 159 (419)
Q Consensus 84 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~-~~~~~-~~~~~~~~-~~~~~~~~~~~l~~~~~~~-~~g~v 159 (419)
..+.+|...|.++.|+.||+.|++++.++ +|+|||.+. +++++ ...|.+.- ..+.|.-+-..|++.+.+. ....|
T Consensus 164 ~el~~h~d~vQSa~WseDG~llatscKdk-qirifDPRa~~~piQ~te~H~~~rdsRv~w~Gn~~rlisTGF~~~R~reV 242 (1012)
T KOG1445|consen 164 VELSGHTDKVQSADWSEDGKLLATSCKDK-QIRIFDPRASMEPIQTTEGHGGMRDSRVLWAGNWERLISTGFTTKRIREV 242 (1012)
T ss_pred ecccCCchhhhccccccCCceEeeecCCc-ceEEeCCccCCCccccccccccchhheeeeccchhhhhhcccchhhheee
Confidence 99999999999999999999999999888 999999986 55555 44444322 5677766655666655431 12367
Q ss_pred EEEeccC
Q 014755 160 NLLSCHT 166 (419)
Q Consensus 160 ~i~d~~~ 166 (419)
++||.+.
T Consensus 243 ~~~Dtr~ 249 (1012)
T KOG1445|consen 243 RAYDTRK 249 (1012)
T ss_pred eeeeccc
Confidence 7777754
No 131
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.95 E-value=3.1e-25 Score=190.89 Aligned_cols=378 Identities=12% Similarity=0.168 Sum_probs=252.5
Q ss_pred eEEcCCC-CEEEEE-e-CCeEEEEecCCCcEEE---EeecCcceeEEEEecCCC---eEEEEeccCCeEEEEEccCCc--
Q 014755 13 SCFSPNA-RYIAVA-V-DYRLVVRDAHSFKVVQ---LFSCLDKISYIEWALDSE---YILCGLYKRLMIQAWSLTQPE-- 81 (419)
Q Consensus 13 ~~~s~d~-~~la~~-~-~~~i~i~~~~~~~~~~---~~~~~~~v~~~~~s~~~~---~l~~~~~~~g~i~iw~~~~~~-- 81 (419)
+++.|+. .+|.+. + +..|.++.-...+..+ +-+|.+.|.+++|...+. +|++++.| ..|+||.+.-+.
T Consensus 151 L~~~~~~~~~lla~Ggs~~~v~~~s~~~d~f~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD-~yIRiW~i~~~~~~ 229 (764)
T KOG1063|consen 151 LAALKNNKTFLLACGGSKFVVDLYSSSADSFARVAELEGHTDWIRSLAFARLGGDDLLLASSSQD-RYIRIWRIVLGDDE 229 (764)
T ss_pred HhhhccCCcEEEEecCcceEEEEeccCCcceeEEEEeeccchhhhhhhhhccCCCcEEEEecCCc-eEEEEEEEEecCCc
Confidence 5566644 333333 3 4457777655444333 446999999999987544 67777776 699999875221
Q ss_pred ----------------------ce-------eeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCC--eEEE---
Q 014755 82 ----------------------WT-------CKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNT--ACVH--- 127 (419)
Q Consensus 82 ----------------------~~-------~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~--~~~~--- 127 (419)
.+ ..+.+|.+.|.++.|+|.+..|++++.|+ ++.+|..... -.+.
T Consensus 230 ~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV~sv~W~p~~~~LLSASaDk-smiiW~pd~~tGiWv~~vR 308 (764)
T KOG1063|consen 230 DSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWVYSVWWHPEGLDLLSASADK-SMIIWKPDENTGIWVDVVR 308 (764)
T ss_pred cccccccccccccCCceeeeeeeEEEEEehhhhhcCcccceEEEEEccchhhheecccCc-ceEEEecCCccceEEEEEE
Confidence 00 11237999999999999999999999998 9999987764 2222
Q ss_pred e---ccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC---CeEEEEEeccccceeeeeECCCCCeEEEEcCCCCc
Q 014755 128 V---QSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT---WEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEY 201 (419)
Q Consensus 128 ~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~ 201 (419)
+ .+....-.+..|+|++..+++-+.. |..++|.... +.....+.+|...|..++|.|.|.+++. .+.|.
T Consensus 309 lGe~gg~a~GF~g~lw~~n~~~ii~~g~~---Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLs--vs~DQ 383 (764)
T KOG1063|consen 309 LGEVGGSAGGFWGGLWSPNSNVIIAHGRT---GGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLS--VSLDQ 383 (764)
T ss_pred eecccccccceeeEEEcCCCCEEEEeccc---CcEEEEeccCccceeeccccccccccceeeeecCCCCEEEE--ecccc
Confidence 1 2223345889999999988888775 8899998322 3455567889999999999999999998 67788
Q ss_pred eEEEEcCCCc-----eEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceec
Q 014755 202 KVLIYSPDGR-----CLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFK 276 (419)
Q Consensus 202 ~i~~~d~~~~-----~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (419)
+-++|-.-|+ .+.+-+.|.+ ..+|+++-+....+++|..+..+|+|+.... .++.+.+... ..+.
T Consensus 384 TTRlFa~wg~q~~wHEiaRPQiHGy--Dl~c~~~vn~~~~FVSgAdEKVlRvF~aPk~-fv~~l~~i~g-------~~~~ 453 (764)
T KOG1063|consen 384 TTRLFARWGRQQEWHEIARPQIHGY--DLTCLSFVNEDLQFVSGADEKVLRVFEAPKS-FVKSLMAICG-------KCFK 453 (764)
T ss_pred ceeeecccccccceeeecccccccc--cceeeehccCCceeeecccceeeeeecCcHH-HHHHHHHHhC-------cccc
Confidence 8888877322 2223334444 7999999886667888888899999996532 1111110000 0111
Q ss_pred cC-CCcccccceeeeccCccccccccccCCce-EEEEEe--ccCCCC------------CCCCCCCCCCCCCCcceEEEE
Q 014755 277 EV-DEPLQLDMSELCLNDDFIQGNSDATNGHI-KVRYEV--MEIPIS------------LPFQKPPTDKPNPKQGIGLMS 340 (419)
Q Consensus 277 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~------------~~~~~~~~~~~~~~~~v~~~~ 340 (419)
.. ..|++..+..+-++....... ....|.. ...+.. ...+.. ...++....+-+|...|.+++
T Consensus 454 ~~~~~p~gA~VpaLGLSnKa~~~~-e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~ 532 (764)
T KOG1063|consen 454 GSDELPDGANVPALGLSNKAFFPG-ETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALA 532 (764)
T ss_pred CchhcccccccccccccCCCCccc-ccccccccceeeecccccCchhccCCChHHHHHHhccchhhHHhccCceeEEEEE
Confidence 11 224444444444444333211 1111111 001110 111111 112333456679999999999
Q ss_pred EccCCeEEEEecCC---CCceEEEeeccCCCcee-ecccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCC
Q 014755 341 WSSDSQYICTRNDS---MPTTLWIWDICRQEPAA-ILVQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGA 408 (419)
Q Consensus 341 ~s~~g~~l~~~~~d---~~~~i~iwd~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~ 408 (419)
.+|+|+++|++... ....|++|+..+-.... +.+|+-.|+.++|||||++|+++|.|.++.+|+....
T Consensus 533 ~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~ 604 (764)
T KOG1063|consen 533 ISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQED 604 (764)
T ss_pred ecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCceEEeeeeecc
Confidence 99999999999753 11469999999876665 5579999999999999999999999999999998643
No 132
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=8e-27 Score=175.99 Aligned_cols=257 Identities=15% Similarity=0.226 Sum_probs=200.0
Q ss_pred ecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCe---EEE-eccCCCCeeeEEEcc--CCCEEEEEeecCCCCeEE
Q 014755 87 DEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTA---CVH-VQSPKHASKGVAFTQ--DGKFAAICTRRDCKDYIN 160 (419)
Q Consensus 87 ~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~---~~~-~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~g~v~ 160 (419)
..|.+.|..+...--|++|++++.|+ +|+|+..+... .+. +.+|.+++..++|.. -|..||+++.| |.|.
T Consensus 8 t~H~D~IHda~lDyygkrlATcsSD~-tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYD---gkVI 83 (299)
T KOG1332|consen 8 TQHEDMIHDAQLDYYGKRLATCSSDG-TVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYD---GKVI 83 (299)
T ss_pred hhhhhhhhHhhhhhhcceeeeecCCc-cEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecC---ceEE
Confidence 46777788877777899999999998 99999998743 233 899999999999965 68999999998 8999
Q ss_pred EEeccCCe--EEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC--CCceEEEEeecCCCCceeEEEEccC---
Q 014755 161 LLSCHTWE--IMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP--DGRCLLKYQAYESGLGVKSISWSPC--- 233 (419)
Q Consensus 161 i~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~--~~~~~~~~~~~~~~~~v~~~~~s~~--- 233 (419)
||.-.+++ .......|...+++++|.|.+.-+.++.+++||.|.+++. +|.-........|...|++++|.|-
T Consensus 84 iWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~ 163 (299)
T KOG1332|consen 84 IWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAP 163 (299)
T ss_pred EEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCC
Confidence 99988764 3445667889999999999876655555888999999988 3222222212223348999999986
Q ss_pred C-----------CeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccc
Q 014755 234 G-----------QFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDA 302 (419)
Q Consensus 234 ~-----------~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (419)
| +.|++|+.|..|+||+..+++-..
T Consensus 164 g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~-------------------------------------------- 199 (299)
T KOG1332|consen 164 GSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKL-------------------------------------------- 199 (299)
T ss_pred ccccccCcccccceeeccCCccceeeeecCCcchhh--------------------------------------------
Confidence 4 569999999999999987652111
Q ss_pred cCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCC----eEEEEecCCCCceEEEeeccCC--Cce-eec-c
Q 014755 303 TNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDS----QYICTRNDSMPTTLWIWDICRQ--EPA-AIL-V 374 (419)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g----~~l~~~~~d~~~~i~iwd~~~~--~~~-~~~-~ 374 (419)
...+.+|.+.|++++|.|.- .+||+++.| |++.||..+.. +-. .++ .
T Consensus 200 -----------------------e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqD--g~viIwt~~~e~e~wk~tll~~ 254 (299)
T KOG1332|consen 200 -----------------------ERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQD--GTVIIWTKDEEYEPWKKTLLEE 254 (299)
T ss_pred -----------------------hhhhhhcchhhhhhhhccccCCCceeeEEecCC--CcEEEEEecCccCccccccccc
Confidence 11134699999999999964 579999999 99999987632 111 222 3
Q ss_pred cCCCeeEEEeCCCCCeEEEEeCCCcEEEeecC-CCeEEecCCC
Q 014755 375 QKDPIRAATWDPTCTRLVLCTGSSHLYMWTPS-GAYCVSNPLP 416 (419)
Q Consensus 375 ~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~-~~~~~~~~~~ 416 (419)
....++.+.||..|+.|+.++.|+.|.+|.-. .|+..+++..
T Consensus 255 f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~~~Gkw~~v~~~ 297 (299)
T KOG1332|consen 255 FPDVVWRVSWSLSGNILAVSGGDNKVTLWKENVDGKWEEVGEV 297 (299)
T ss_pred CCcceEEEEEeccccEEEEecCCcEEEEEEeCCCCcEEEcccc
Confidence 66789999999999999999999999999887 5787777653
No 133
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.95 E-value=1.2e-25 Score=184.61 Aligned_cols=277 Identities=15% Similarity=0.142 Sum_probs=214.9
Q ss_pred CeEEcCCCCEEEEEe-CCeEEEEecCCC--cEEEEee-cCcceeEEEEecCCC-eEEEEeccCCeEEEEEccCCccee--
Q 014755 12 PSCFSPNARYIAVAV-DYRLVVRDAHSF--KVVQLFS-CLDKISYIEWALDSE-YILCGLYKRLMIQAWSLTQPEWTC-- 84 (419)
Q Consensus 12 ~~~~s~d~~~la~~~-~~~i~i~~~~~~--~~~~~~~-~~~~v~~~~~s~~~~-~l~~~~~~~g~i~iw~~~~~~~~~-- 84 (419)
+|.|+|....|.+++ |++++||.+... ..++.+. ...+|.+..|.|+|. .+++++.. ..++.||+.+.+...
T Consensus 218 sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rr-ky~ysyDle~ak~~k~~ 296 (514)
T KOG2055|consen 218 SVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRR-KYLYSYDLETAKVTKLK 296 (514)
T ss_pred EEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccc-eEEEEeecccccccccc
Confidence 389999999999998 999999987643 3333333 567999999999999 66676655 689999999886432
Q ss_pred eeecCC-ccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEe
Q 014755 85 KIDEGL-AGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLS 163 (419)
Q Consensus 85 ~~~~~~-~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d 163 (419)
.+.++. ..+.....+|++++|+..+..+ .|.+....+++.+.-....+.+..++|+.+++.|++++.+ |.|++||
T Consensus 297 ~~~g~e~~~~e~FeVShd~~fia~~G~~G-~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~~~---GeV~v~n 372 (514)
T KOG2055|consen 297 PPYGVEEKSMERFEVSHDSNFIAIAGNNG-HIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASGGT---GEVYVWN 372 (514)
T ss_pred CCCCcccchhheeEecCCCCeEEEcccCc-eEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEcCC---ceEEEEe
Confidence 222333 3477888999999999999987 9999999999888755567788999999999998888776 8999999
Q ss_pred ccCCeEEEEEeccc-cceeeeeECCCCCeEEEEcCCCCceEEEEcC-------CCceEEEEeecCCCCceeEEEEccCCC
Q 014755 164 CHTWEIMGVFAVDT-LDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-------DGRCLLKYQAYESGLGVKSISWSPCGQ 235 (419)
Q Consensus 164 ~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-------~~~~~~~~~~~~~~~~v~~~~~s~~~~ 235 (419)
++...+++.+.... -.-+.++.++++.++++ ++..|-|.+||. ..+++..+..... .|+++.|+|+.+
T Consensus 373 l~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~--GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt--~Itsl~Fn~d~q 448 (514)
T KOG2055|consen 373 LRQNSCLHRFVDDGSVHGTSLCISLNGSYLAT--GSDSGIVNIYDGNSCFASTNPKPIKTVDNLTT--AITSLQFNHDAQ 448 (514)
T ss_pred cCCcceEEEEeecCccceeeeeecCCCceEEe--ccCcceEEEeccchhhccCCCCchhhhhhhhe--eeeeeeeCcchh
Confidence 99998888776532 22356778899999999 888899999996 2234444433333 799999999999
Q ss_pred eEEEEEe--cCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEe
Q 014755 236 FLAVGSY--DQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEV 313 (419)
Q Consensus 236 ~l~~~~~--d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (419)
.||.+|. +..+|+-.+.+......+...
T Consensus 449 iLAiaS~~~knalrLVHvPS~TVFsNfP~~-------------------------------------------------- 478 (514)
T KOG2055|consen 449 ILAIASRVKKNALRLVHVPSCTVFSNFPTS-------------------------------------------------- 478 (514)
T ss_pred hhhhhhhccccceEEEeccceeeeccCCCC--------------------------------------------------
Confidence 9988875 567888887765444433210
Q ss_pred ccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeecc
Q 014755 314 MEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDIC 365 (419)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~ 365 (419)
...-+.|+|++|||.|-+||.|..+ |.+.+|.+.
T Consensus 479 ----------------n~~vg~vtc~aFSP~sG~lAvGNe~--grv~l~kL~ 512 (514)
T KOG2055|consen 479 ----------------NTKVGHVTCMAFSPNSGYLAVGNEA--GRVHLFKLH 512 (514)
T ss_pred ----------------CCcccceEEEEecCCCceEEeecCC--CceeeEeec
Confidence 0123448999999999999999999 999999874
No 134
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.94 E-value=1.8e-25 Score=183.24 Aligned_cols=244 Identities=16% Similarity=0.269 Sum_probs=188.0
Q ss_pred ecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCe--------E---EEeccCCCCeeeEEEccCC-CEEEEEeecC
Q 014755 87 DEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTA--------C---VHVQSPKHASKGVAFTQDG-KFAAICTRRD 154 (419)
Q Consensus 87 ~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~--------~---~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~ 154 (419)
..|.+.|+.++..|+...|+++...++.+.|||..... + +++.+|...-.+++|++.. -.+++++.+
T Consensus 121 i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d- 199 (422)
T KOG0264|consen 121 INHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDD- 199 (422)
T ss_pred ccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCC-
Confidence 36888999999999998888877666799999987511 1 1367777777889999876 456666665
Q ss_pred CCCeEEEEeccCCe-------EEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-C--CceEEEEeecCCCCc
Q 014755 155 CKDYINLLSCHTWE-------IMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-D--GRCLLKYQAYESGLG 224 (419)
Q Consensus 155 ~~g~v~i~d~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~--~~~~~~~~~~~~~~~ 224 (419)
+.|.+||+.... +...+.+|...|..++|++-...++.. .+.|+.+.+||. + .+..+....|. ..
T Consensus 200 --~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~s-v~dd~~L~iwD~R~~~~~~~~~~~ah~--~~ 274 (422)
T KOG0264|consen 200 --HTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGS-VGDDGKLMIWDTRSNTSKPSHSVKAHS--AE 274 (422)
T ss_pred --CcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhhee-ecCCCeEEEEEcCCCCCCCcccccccC--Cc
Confidence 899999997632 345678899999999999987766543 567899999999 3 23333344444 48
Q ss_pred eeEEEEccC-CCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCcccccccccc
Q 014755 225 VKSISWSPC-GQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDAT 303 (419)
Q Consensus 225 v~~~~~s~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (419)
+.|++|+|- +..||+|+.|++|++||+++.+.
T Consensus 275 vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~----------------------------------------------- 307 (422)
T KOG0264|consen 275 VNCVAFNPFNEFILATGSADKTVALWDLRNLNK----------------------------------------------- 307 (422)
T ss_pred eeEEEeCCCCCceEEeccCCCcEEEeechhccc-----------------------------------------------
Confidence 999999995 56789999999999999876322
Q ss_pred CCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCC-eEEEEecCCCCceEEEeeccCC-C-------------
Q 014755 304 NGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDS-QYICTRNDSMPTTLWIWDICRQ-E------------- 368 (419)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~d~~~~i~iwd~~~~-~------------- 368 (419)
++..+.+|...|..+.|||+. ..||+++.| +.+.+||+..- +
T Consensus 308 ---------------------~lh~~e~H~dev~~V~WSPh~etvLASSg~D--~rl~vWDls~ig~eq~~eda~dgppE 364 (422)
T KOG0264|consen 308 ---------------------PLHTFEGHEDEVFQVEWSPHNETVLASSGTD--RRLNVWDLSRIGEEQSPEDAEDGPPE 364 (422)
T ss_pred ---------------------CceeccCCCcceEEEEeCCCCCceeEecccC--CcEEEEeccccccccChhhhccCCcc
Confidence 122245799999999999975 577888888 99999998751 1
Q ss_pred ceeec-ccCCCeeEEEeCCCCC-eEEEEeCCCcEEEeecC
Q 014755 369 PAAIL-VQKDPIRAATWDPTCT-RLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 369 ~~~~~-~~~~~v~~~~~s~~~~-~l~s~~~dg~i~vw~~~ 406 (419)
++-.. ||...|..+.|+|... .|+|+++|+.+.||++.
T Consensus 365 llF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 365 LLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred eeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 11222 6999999999999988 66888999999999987
No 135
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.94 E-value=2.5e-24 Score=167.10 Aligned_cols=289 Identities=17% Similarity=0.234 Sum_probs=216.0
Q ss_pred ecCcceeEEEEec-CCCeEEEEeccCCeEEEEEccCCcc----------ee-----eeecCCccEeEEEECCCCCEEEE-
Q 014755 45 SCLDKISYIEWAL-DSEYILCGLYKRLMIQAWSLTQPEW----------TC-----KIDEGLAGIAYARWSPDSRHILT- 107 (419)
Q Consensus 45 ~~~~~v~~~~~s~-~~~~l~~~~~~~g~i~iw~~~~~~~----------~~-----~~~~~~~~v~~~~~~~~~~~l~~- 107 (419)
.|.+.|+++...+ .|+++++|+.| |.|.+||+++... .. .-..|.-.|..+.|-|-..-+++
T Consensus 41 ~HgGsvNsL~id~tegrymlSGgad-gsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFts 119 (397)
T KOG4283|consen 41 PHGGSVNSLQIDLTEGRYMLSGGAD-GSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTS 119 (397)
T ss_pred cCCCccceeeeccccceEEeecCCC-ccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeec
Confidence 4889999999988 79999999987 8999999975421 11 11246667999999995554554
Q ss_pred EecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCC---CEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeee
Q 014755 108 TSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDG---KFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIE 184 (419)
Q Consensus 108 ~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~ 184 (419)
++-|. ++++||..+-+.......++.|.+-+++|-. .++|+|..+ -.|++-|+.+|..-..+.+|...|.++.
T Consensus 120 sSFDh-tlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~---~~VrLCDi~SGs~sH~LsGHr~~vlaV~ 195 (397)
T KOG4283|consen 120 SSFDH-TLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRD---VQVRLCDIASGSFSHTLSGHRDGVLAVE 195 (397)
T ss_pred ccccc-eEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCC---CcEEEEeccCCcceeeeccccCceEEEE
Confidence 45555 9999999998777756667788888888854 345555554 6899999999999999999999999999
Q ss_pred ECCCCCeEEEEcCCCCceEEEEcC--CCceEEEEeecC------------CCCceeEEEEccCCCeEEEEEecCcEEEEE
Q 014755 185 WSPDDSAIVIWDSPLEYKVLIYSP--DGRCLLKYQAYE------------SGLGVKSISWSPCGQFLAVGSYDQTLRVLN 250 (419)
Q Consensus 185 ~~~~~~~l~~~~~~~~~~i~~~d~--~~~~~~~~~~~~------------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d 250 (419)
|+|...+++.. ++.|+.|++||+ ...++..+..|. +.+.+.+++|+.++.++++.+.|..+++|+
T Consensus 196 Wsp~~e~vLat-gsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn 274 (397)
T KOG4283|consen 196 WSPSSEWVLAT-GSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWN 274 (397)
T ss_pred eccCceeEEEe-cCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEee
Confidence 99999887653 677999999999 334555544333 335799999999999999999999999999
Q ss_pred cCCceeee-eecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCC
Q 014755 251 HLTWKTFA-EFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDK 329 (419)
Q Consensus 251 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (419)
..+|+... .+. ++ .-+.
T Consensus 275 ~~~G~ntl~~~g---~~-------~~n~---------------------------------------------------- 292 (397)
T KOG4283|consen 275 MESGRNTLREFG---PI-------IHNQ---------------------------------------------------- 292 (397)
T ss_pred cccCcccccccc---cc-------cccc----------------------------------------------------
Confidence 98876422 111 00 0000
Q ss_pred CCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc-cCCCeeEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 330 PNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV-QKDPIRAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 330 ~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
..|. .+. +. +-+...++.--.+ +.+.++++-.++.+..+. |...|.|.++-|+-+.+.++..|+.|..|-+.
T Consensus 293 ~~~~-~~~-~~-~~~s~vfv~~p~~--~~lall~~~sgs~ir~l~~h~k~i~c~~~~~~fq~~~tg~~d~ni~~w~p~ 365 (397)
T KOG4283|consen 293 TTSF-AVH-IQ-SMDSDVFVLFPND--GSLALLNLLEGSFVRRLSTHLKRINCAAYRPDFEQCFTGDMNGNIYMWSPA 365 (397)
T ss_pred cccc-eEE-Ee-ecccceEEEEecC--CeEEEEEccCceEEEeeecccceeeEEeecCchhhhhccccCCcccccccc
Confidence 0000 011 22 2333344444445 788999988888877774 98899999999999999999999999999883
No 136
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.94 E-value=8.3e-25 Score=188.36 Aligned_cols=240 Identities=15% Similarity=0.108 Sum_probs=197.6
Q ss_pred hcccccC---eEEcCCCCEEEEEe-CCeEEEEecCCCcEEE---EeecCcceeE-EEEec-CCCeEEEEeccCCeEEEEE
Q 014755 6 AYKQTGP---SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQ---LFSCLDKISY-IEWAL-DSEYILCGLYKRLMIQAWS 76 (419)
Q Consensus 6 ~~~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~---~~~~~~~v~~-~~~s~-~~~~l~~~~~~~g~i~iw~ 76 (419)
+.+|... +++.++ ..+++++ |+++++|+-..++.+. ..+|.+-|.+ +++-+ ++-.+++|+.| .+|.+|.
T Consensus 10 l~gH~~DVr~v~~~~~-~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D-~~i~v~~ 87 (745)
T KOG0301|consen 10 LEGHKSDVRAVAVTDG-VCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMD-TTIIVFK 87 (745)
T ss_pred eccCccchheeEecCC-eEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeeccc-ceEEEEe
Confidence 3566654 445544 4677777 8999999987776655 3346676666 77775 45568888877 7999999
Q ss_pred ccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCC
Q 014755 77 LTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCK 156 (419)
Q Consensus 77 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 156 (419)
+.+..+...+.+|...|.++....++. +++++-|. ++++|-...-... +.+|...|.++..-|++ .+++|+.|
T Consensus 88 ~~~~~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~-TakvW~~~~l~~~-l~gH~asVWAv~~l~e~-~~vTgsaD--- 160 (745)
T KOG0301|consen 88 LSQAEPLYTLKGHKSNVCSLSIGEDGT-LISGSWDS-TAKVWRIGELVYS-LQGHTASVWAVASLPEN-TYVTGSAD--- 160 (745)
T ss_pred cCCCCchhhhhccccceeeeecCCcCc-eEeccccc-ceEEecchhhhcc-cCCcchheeeeeecCCC-cEEeccCc---
Confidence 999999999999999999999888887 99999998 9999987542222 78999999999999988 78888887
Q ss_pred CeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCe
Q 014755 157 DYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQF 236 (419)
Q Consensus 157 g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 236 (419)
.+|++|.- ++.++.+.+|...|+.+++-+++.++- ++.||.|++|+++|..+..+.+|.. .+++++...++..
T Consensus 161 KtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~~flS---csNDg~Ir~w~~~ge~l~~~~ghtn--~vYsis~~~~~~~ 233 (745)
T KOG0301|consen 161 KTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDSHFLS---CSNDGSIRLWDLDGEVLLEMHGHTN--FVYSISMALSDGL 233 (745)
T ss_pred ceeeeccC--CchhhhhccchhheeeeEEecCCCeEe---ecCCceEEEEeccCceeeeeeccce--EEEEEEecCCCCe
Confidence 79999986 778899999999999999999887665 4679999999999999998888777 8999998888889
Q ss_pred EEEEEecCcEEEEEcCCceeeeeeccc
Q 014755 237 LAVGSYDQTLRVLNHLTWKTFAEFMHL 263 (419)
Q Consensus 237 l~~~~~d~~i~v~d~~~~~~~~~~~~~ 263 (419)
++++++|+++++|+.. ++.+.+.++
T Consensus 234 Ivs~gEDrtlriW~~~--e~~q~I~lP 258 (745)
T KOG0301|consen 234 IVSTGEDRTLRIWKKD--ECVQVITLP 258 (745)
T ss_pred EEEecCCceEEEeecC--ceEEEEecC
Confidence 9999999999999976 666665543
No 137
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.94 E-value=5.7e-25 Score=180.37 Aligned_cols=260 Identities=12% Similarity=0.164 Sum_probs=195.0
Q ss_pred EeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCc----------ceeeeecCCccEeEEEECCCCC-EEEEEecC
Q 014755 43 LFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPE----------WTCKIDEGLAGIAYARWSPDSR-HILTTSDF 111 (419)
Q Consensus 43 ~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~----------~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~ 111 (419)
.+.|.+.|+.+.+.|....|+++....+.|.|||..+.. +-.++.+|...-.+++|++... .|++++.+
T Consensus 120 ~i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d 199 (422)
T KOG0264|consen 120 KINHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDD 199 (422)
T ss_pred eccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCC
Confidence 456999999999999887777665566899999986442 1226778888778899999654 46666666
Q ss_pred CCeEEEEEcCCCeE--------EEeccCCCCeeeEEEccCC-CEEEEEeecCCCCeEEEEecc--CCeEEEEEeccccce
Q 014755 112 QLRLTVWSLLNTAC--------VHVQSPKHASKGVAFTQDG-KFAAICTRRDCKDYINLLSCH--TWEIMGVFAVDTLDL 180 (419)
Q Consensus 112 ~~~i~iwd~~~~~~--------~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~g~v~i~d~~--~~~~~~~~~~~~~~v 180 (419)
. .|++||+..... ..+..|...|..++|++-. ..+++++.| +.+.|||+| +.+.......|...+
T Consensus 200 ~-~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd---~~L~iwD~R~~~~~~~~~~~ah~~~v 275 (422)
T KOG0264|consen 200 H-TICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDD---GKLMIWDTRSNTSKPSHSVKAHSAEV 275 (422)
T ss_pred C-cEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCC---CeEEEEEcCCCCCCCcccccccCCce
Confidence 6 999999986322 1278899999999999976 556666665 899999999 556667778899999
Q ss_pred eeeeECCCCCeEEEEcCCCCceEEEEcC--CCceEEEEeecCCCCceeEEEEccCC-CeEEEEEecCcEEEEEcCCceee
Q 014755 181 ADIEWSPDDSAIVIWDSPLEYKVLIYSP--DGRCLLKYQAYESGLGVKSISWSPCG-QFLAVGSYDQTLRVLNHLTWKTF 257 (419)
Q Consensus 181 ~~~~~~~~~~~l~~~~~~~~~~i~~~d~--~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~~~~~~ 257 (419)
.|++|+|-+.+++.. ++.|++|.+||+ -.+++..+..|.. .|.++.|+|+. ..||+++.|+.+.|||+..-...
T Consensus 276 n~~~fnp~~~~ilAT-~S~D~tV~LwDlRnL~~~lh~~e~H~d--ev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~e 352 (422)
T KOG0264|consen 276 NCVAFNPFNEFILAT-GSADKTVALWDLRNLNKPLHTFEGHED--EVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEE 352 (422)
T ss_pred eEEEeCCCCCceEEe-ccCCCcEEEeechhcccCceeccCCCc--ceEEEEeCCCCCceeEecccCCcEEEEeccccccc
Confidence 999999987766543 677999999999 3457778887777 89999999975 57888999999999998753322
Q ss_pred eeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceE
Q 014755 258 AEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIG 337 (419)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 337 (419)
+.-+ ......-.+.|. ..+|...|.
T Consensus 353 q~~e---da~dgppEllF~----------------------------------------------------HgGH~~kV~ 377 (422)
T KOG0264|consen 353 QSPE---DAEDGPPELLFI----------------------------------------------------HGGHTAKVS 377 (422)
T ss_pred cChh---hhccCCcceeEE----------------------------------------------------ecCcccccc
Confidence 2111 000000011111 346999999
Q ss_pred EEEEccCCeE-EEEecCCCCceEEEeeccC
Q 014755 338 LMSWSSDSQY-ICTRNDSMPTTLWIWDICR 366 (419)
Q Consensus 338 ~~~~s~~g~~-l~~~~~d~~~~i~iwd~~~ 366 (419)
.+.|+|+..+ |++.++| +.+.||+...
T Consensus 378 DfsWnp~ePW~I~SvaeD--N~LqIW~~s~ 405 (422)
T KOG0264|consen 378 DFSWNPNEPWTIASVAED--NILQIWQMAE 405 (422)
T ss_pred cccCCCCCCeEEEEecCC--ceEEEeeccc
Confidence 9999998765 5667777 9999999763
No 138
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.94 E-value=3.1e-24 Score=184.39 Aligned_cols=232 Identities=17% Similarity=0.243 Sum_probs=181.6
Q ss_pred eEEcCCCCEEEEEeCCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCc
Q 014755 13 SCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLA 91 (419)
Q Consensus 13 ~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~ 91 (419)
++|-|||..|+.+.++++.+||...|..++.+. |.+.|.+++|+.||+.+|+|+.| ..|.+|...-...+ +. .|.+
T Consensus 18 ~afkPDGsqL~lAAg~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aD-K~VI~W~~klEG~L-kY-SH~D 94 (1081)
T KOG1538|consen 18 IAFKPDGTQLILAAGSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSAD-KSVIIWTSKLEGIL-KY-SHND 94 (1081)
T ss_pred eEECCCCceEEEecCCEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCc-eeEEEeccccccee-ee-ccCC
Confidence 899999999999999999999999999888664 99999999999999999999988 59999985422221 22 6889
Q ss_pred cEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEE
Q 014755 92 GIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMG 171 (419)
Q Consensus 92 ~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~ 171 (419)
.|.|+.|+|-.+.|++++-. ..-+|..+.....+ ......+.+++|..||++++.|-.+ |+|.+-+-. +++..
T Consensus 95 ~IQCMsFNP~~h~LasCsLs--dFglWS~~qK~V~K-~kss~R~~~CsWtnDGqylalG~~n---GTIsiRNk~-gEek~ 167 (1081)
T KOG1538|consen 95 AIQCMSFNPITHQLASCSLS--DFGLWSPEQKSVSK-HKSSSRIICCSWTNDGQYLALGMFN---GTISIRNKN-GEEKV 167 (1081)
T ss_pred eeeEeecCchHHHhhhcchh--hccccChhhhhHHh-hhhheeEEEeeecCCCcEEEEeccC---ceEEeecCC-CCcce
Confidence 99999999999999999865 36689887655443 2234567899999999999999886 899988654 33333
Q ss_pred EEe---ccccceeeeeECCCC-----CeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEec
Q 014755 172 VFA---VDTLDLADIEWSPDD-----SAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYD 243 (419)
Q Consensus 172 ~~~---~~~~~v~~~~~~~~~-----~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 243 (419)
.+. +.+.+|.+++|+|.. ..+++.| -..++.+|.++|+.+..-....- ...|+.+-++|.+++.|+.|
T Consensus 168 ~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~D--W~qTLSFy~LsG~~Igk~r~L~F--dP~CisYf~NGEy~LiGGsd 243 (1081)
T KOG1538|consen 168 KIERPGGSNSPIWSICWNPSSGEGRNDILAVAD--WGQTLSFYQLSGKQIGKDRALNF--DPCCISYFTNGEYILLGGSD 243 (1081)
T ss_pred EEeCCCCCCCCceEEEecCCCCCCccceEEEEe--ccceeEEEEecceeecccccCCC--CchhheeccCCcEEEEccCC
Confidence 333 356889999999974 3556633 35788888888887764443333 57799999999999999999
Q ss_pred CcEEEEEcCCceeeee
Q 014755 244 QTLRVLNHLTWKTFAE 259 (419)
Q Consensus 244 ~~i~v~d~~~~~~~~~ 259 (419)
+.+++|. +.|-.+.+
T Consensus 244 k~L~~fT-R~GvrLGT 258 (1081)
T KOG1538|consen 244 KQLSLFT-RDGVRLGT 258 (1081)
T ss_pred CceEEEe-ecCeEEee
Confidence 9999986 33444333
No 139
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.94 E-value=9.6e-25 Score=181.01 Aligned_cols=291 Identities=11% Similarity=0.165 Sum_probs=213.5
Q ss_pred EEEEEeCCeEEEEecCCCcEEEEeec---CcceeEEEEecCCCeEEEEeccCCeEEEEEccCC--cceeeeecCCccEeE
Q 014755 21 YIAVAVDYRLVVRDAHSFKVVQLFSC---LDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP--EWTCKIDEGLAGIAY 95 (419)
Q Consensus 21 ~la~~~~~~i~i~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~--~~~~~~~~~~~~v~~ 95 (419)
+.+..+.++++|||....+....+-| ...+.++.|+....+++.....+..+++|.-... +....-......-.|
T Consensus 5 l~~aS~gd~~kl~D~s~~~~~~~~~~~t~~pg~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd~~~C 84 (673)
T KOG4378|consen 5 LHVASTGDKTKLSDFSDLETKSEYVHQTAEPGDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGDNAFC 84 (673)
T ss_pred eeeeccCCceEEeecccccCccccccCCCCCcceeeeccccceEEEeecCCceeEEEecccCCCCccceeeccccchHHH
Confidence 44555577899999987665554432 2348999999876543333333468888875433 121111111123345
Q ss_pred EEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEe
Q 014755 96 ARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFA 174 (419)
Q Consensus 96 ~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~ 174 (419)
++......++++++..+ .|+|||++...+.+ +..|...|+++.++-...+||+++.. |.|.|..+.++.....+.
T Consensus 85 v~~~s~S~y~~sgG~~~-~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~g---Gdiiih~~~t~~~tt~f~ 160 (673)
T KOG4378|consen 85 VACASQSLYEISGGQSG-CVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDG---GDIIIHGTKTKQKTTTFT 160 (673)
T ss_pred HhhhhcceeeeccCcCc-eeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccC---CcEEEEecccCcccccee
Confidence 55555568899998877 99999999776666 88999999999999999999999875 899999999988877777
Q ss_pred ccccc-eeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCC-CeEEEEEecCcEEEEEcC
Q 014755 175 VDTLD-LADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCG-QFLAVGSYDQTLRVLNHL 252 (419)
Q Consensus 175 ~~~~~-v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~ 252 (419)
...+. ++-+.|+|..+.++.. .+.+|.|.+||.+|.....--...|..+...++|+|.. .+|++.+.|..|.+||+.
T Consensus 161 ~~sgqsvRll~ys~skr~lL~~-asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~ 239 (673)
T KOG4378|consen 161 IDSGQSVRLLRYSPSKRFLLSI-ASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIR 239 (673)
T ss_pred cCCCCeEEEeecccccceeeEe-eccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecc
Confidence 66444 5689999999887764 56689999999966433222222344488999999965 578889999999999998
Q ss_pred CceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCC
Q 014755 253 TWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNP 332 (419)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (419)
+.+....+..
T Consensus 240 s~~s~~~l~y---------------------------------------------------------------------- 249 (673)
T KOG4378|consen 240 SQASTDRLTY---------------------------------------------------------------------- 249 (673)
T ss_pred cccccceeee----------------------------------------------------------------------
Confidence 7665554431
Q ss_pred CcceEEEEEccCCeEEEEecCCCCceEEEeeccCCC-ceeec-ccCCCeeEEEeCCCC
Q 014755 333 KQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQE-PAAIL-VQKDPIRAATWDPTC 388 (419)
Q Consensus 333 ~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~-~~~~~-~~~~~v~~~~~s~~~ 388 (419)
..+.+.++|+++|.+|++|+.. |.|..||++..+ ++.+. .|...|++++|-|.-
T Consensus 250 ~~Plstvaf~~~G~~L~aG~s~--G~~i~YD~R~~k~Pv~v~sah~~sVt~vafq~s~ 305 (673)
T KOG4378|consen 250 SHPLSTVAFSECGTYLCAGNSK--GELIAYDMRSTKAPVAVRSAHDASVTRVAFQPSP 305 (673)
T ss_pred cCCcceeeecCCceEEEeecCC--ceEEEEecccCCCCceEeeecccceeEEEeeecc
Confidence 1236789999999999999998 999999998744 55555 499999999997754
No 140
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.94 E-value=3.3e-25 Score=167.33 Aligned_cols=244 Identities=11% Similarity=0.147 Sum_probs=193.3
Q ss_pred ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC---cceeeeecCCccEeEEEECC--CCCEEEEEecCCCeEEEEE
Q 014755 45 SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP---EWTCKIDEGLAGIAYARWSP--DSRHILTTSDFQLRLTVWS 119 (419)
Q Consensus 45 ~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~---~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~~i~iwd 119 (419)
.|.+.|..+...-.|+.||++++| ++|+|+..++. +++.++.+|.++|..++|.. -|..|++++.|+ .|.||.
T Consensus 9 ~H~D~IHda~lDyygkrlATcsSD-~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDg-kVIiWk 86 (299)
T KOG1332|consen 9 QHEDMIHDAQLDYYGKRLATCSSD-GTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDG-KVIIWK 86 (299)
T ss_pred hhhhhhhHhhhhhhcceeeeecCC-ccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCc-eEEEEe
Confidence 488889999888899999999988 89999999865 45678999999999999977 899999999998 999999
Q ss_pred cCCCeEEE---eccCCCCeeeEEEccCC--CEEEEEeecCCCCeEEEEeccCC---eEEEEEeccccceeeeeECCC---
Q 014755 120 LLNTACVH---VQSPKHASKGVAFTQDG--KFAAICTRRDCKDYINLLSCHTW---EIMGVFAVDTLDLADIEWSPD--- 188 (419)
Q Consensus 120 ~~~~~~~~---~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~g~v~i~d~~~~---~~~~~~~~~~~~v~~~~~~~~--- 188 (419)
-++++..+ ...|...+++++|.|.+ -.|++++.| |.|.+++.+.. ...+....|.-.+++++|.|.
T Consensus 87 e~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSD---G~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~ 163 (299)
T KOG1332|consen 87 EENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSD---GKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAP 163 (299)
T ss_pred cCCCchhhhhhhhhhcccceeecccccccceEEEEeeCC---CcEEEEEEcCCCCccchhhhhccccccceeeecCcCCC
Confidence 99986554 56788899999999875 667788776 89999988753 344556778889999999996
Q ss_pred C-----------CeEEEEcCCCCceEEEEcCCC---ceEEEEeecCCCCceeEEEEccCC----CeEEEEEecCcEEEEE
Q 014755 189 D-----------SAIVIWDSPLEYKVLIYSPDG---RCLLKYQAYESGLGVKSISWSPCG----QFLAVGSYDQTLRVLN 250 (419)
Q Consensus 189 ~-----------~~l~~~~~~~~~~i~~~d~~~---~~~~~~~~~~~~~~v~~~~~s~~~----~~l~~~~~d~~i~v~d 250 (419)
| +.++. ++.|+.|++|+.+. ...+.+..|.+ .|+.++|.|.- .+||+++.||++.||.
T Consensus 164 g~~~~~~~~~~~krlvS--gGcDn~VkiW~~~~~~w~~e~~l~~H~d--wVRDVAwaP~~gl~~s~iAS~SqDg~viIwt 239 (299)
T KOG1332|consen 164 GSLVDQGPAAKVKRLVS--GGCDNLVKIWKFDSDSWKLERTLEGHKD--WVRDVAWAPSVGLPKSTIASCSQDGTVIIWT 239 (299)
T ss_pred ccccccCcccccceeec--cCCccceeeeecCCcchhhhhhhhhcch--hhhhhhhccccCCCceeeEEecCCCcEEEEE
Confidence 4 34555 77899999999933 34445666666 99999999964 4899999999999998
Q ss_pred cCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCC
Q 014755 251 HLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKP 330 (419)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (419)
.......... ++ +.
T Consensus 240 ~~~e~e~wk~---------------------------------------------------------------tl---l~ 253 (299)
T KOG1332|consen 240 KDEEYEPWKK---------------------------------------------------------------TL---LE 253 (299)
T ss_pred ecCccCcccc---------------------------------------------------------------cc---cc
Confidence 6521110000 00 00
Q ss_pred CCCcceEEEEEccCCeEEEEecCCCCceEEEeecc
Q 014755 331 NPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDIC 365 (419)
Q Consensus 331 ~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~ 365 (419)
.-...+..+.||+.|.+|+.++.| +.|.+|.-.
T Consensus 254 ~f~~~~w~vSWS~sGn~LaVs~Gd--Nkvtlwke~ 286 (299)
T KOG1332|consen 254 EFPDVVWRVSWSLSGNILAVSGGD--NKVTLWKEN 286 (299)
T ss_pred cCCcceEEEEEeccccEEEEecCC--cEEEEEEeC
Confidence 123457899999999999999998 999999744
No 141
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.94 E-value=9.1e-25 Score=171.95 Aligned_cols=312 Identities=16% Similarity=0.303 Sum_probs=219.2
Q ss_pred eEEcC-----CCCEEEEEeCCeEEEEecCCCc---EEEEee---cCcceeEEEEecC----CCeEEEEeccCCeEEEEEc
Q 014755 13 SCFSP-----NARYIAVAVDYRLVVRDAHSFK---VVQLFS---CLDKISYIEWALD----SEYILCGLYKRLMIQAWSL 77 (419)
Q Consensus 13 ~~~s~-----d~~~la~~~~~~i~i~~~~~~~---~~~~~~---~~~~v~~~~~s~~----~~~l~~~~~~~g~i~iw~~ 77 (419)
++|++ +-..+|+++.+.+.+|.....- .++.+. |.+....++|+-| ..++|+++.. |.|+|.|+
T Consensus 44 v~fN~~~~~~e~~vfatvG~~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~~-GvIrVid~ 122 (385)
T KOG1034|consen 44 VAFNSFLGCDEPQVFATVGGNRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGGYL-GVIRVIDV 122 (385)
T ss_pred eeeehhcCCCCCceEEEeCCcEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeecce-eEEEEEec
Confidence 66764 3467778888899999876533 333332 6677888999864 3467777755 99999999
Q ss_pred cCCcceeeeecCCccEeEEEECCCC-CEEEEEecCCCeEEEEEcCCCeEEE----eccCCCCeeeEEEccCCCEEEEEee
Q 014755 78 TQPEWTCKIDEGLAGIAYARWSPDS-RHILTTSDFQLRLTVWSLLNTACVH----VQSPKHASKGVAFTQDGKFAAICTR 152 (419)
Q Consensus 78 ~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~~i~iwd~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~ 152 (419)
.+++....+.+|...|..+.+.|+. +++++++.|. .|++|++++..++. +.+|...|.++.|+++|.+|++++.
T Consensus 123 ~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~-svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGm 201 (385)
T KOG1034|consen 123 VSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDH-SVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGM 201 (385)
T ss_pred chhhhccceeccCccchhhhcCCCCCcEEEEecCCc-eEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCC
Confidence 9999999999999999999999965 6777888888 99999999999887 5778999999999999999999999
Q ss_pred cCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEcc
Q 014755 153 RDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSP 232 (419)
Q Consensus 153 ~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~ 232 (419)
| ..+++|++...+....++ .+..|+|++...-+ .. ....+.+.+ ....|...|-|+.|-
T Consensus 202 D---hslk~W~l~~~~f~~~lE------~s~~~~~~~t~~pf--pt--~~~~fp~fs-------t~diHrnyVDCvrw~- 260 (385)
T KOG1034|consen 202 D---HSLKLWRLNVKEFKNKLE------LSITYSPNKTTRPF--PT--PKTHFPDFS-------TTDIHRNYVDCVRWF- 260 (385)
T ss_pred c---ceEEEEecChhHHhhhhh------hhcccCCCCccCcC--Cc--ccccccccc-------ccccccchHHHHHHH-
Confidence 7 799999998644332222 12556666654322 11 111122211 112233478888885
Q ss_pred CCCeEEEEEecCcEEEEEcC-CceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEE
Q 014755 233 CGQFLAVGSYDQTLRVLNHL-TWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRY 311 (419)
Q Consensus 233 ~~~~l~~~~~d~~i~v~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (419)
|.++++-+-++.|..|..- -.+.+.....+... .-.+. .+
T Consensus 261 -gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~-----~Ti~~---------------------------------~~ 301 (385)
T KOG1034|consen 261 -GDFILSKSCENAIVCWKPGKLEESIHNVKPPESA-----TTILG---------------------------------EF 301 (385)
T ss_pred -hhheeecccCceEEEEecchhhhhhhccCCCccc-----eeeee---------------------------------Ee
Confidence 5799999999999999862 11211111100000 00000 00
Q ss_pred EeccCCCCCCCCCCCCCCCCCCcceEE--EEEccCCeEEEEecCCCCceEEEeeccCCCcee--ecc---cCCCeeEEEe
Q 014755 312 EVMEIPISLPFQKPPTDKPNPKQGIGL--MSWSSDSQYICTRNDSMPTTLWIWDICRQEPAA--ILV---QKDPIRAATW 384 (419)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~--~~~---~~~~v~~~~~ 384 (419)
+ -....|.- .+|.|-++.||.|... |.|++||++..++.. .+. ....|.+.+|
T Consensus 302 ~------------------~~~c~iWfirf~~d~~~~~la~gnq~--g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sf 361 (385)
T KOG1034|consen 302 D------------------YPMCDIWFIRFAFDPWQKMLALGNQS--GKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSF 361 (385)
T ss_pred c------------------cCccceEEEEEeecHHHHHHhhccCC--CcEEEEECCCCCCccCceEEeccccceeeeeee
Confidence 0 12223444 4556778999999998 999999999876532 222 3457999999
Q ss_pred CCCCCeEEEEeCCCcEEEeecC
Q 014755 385 DPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 385 s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
|.||.+|+..++|++|.-||.-
T Consensus 362 S~dgs~lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 362 SRDGSILVLVCDDGTVWRWDRV 383 (385)
T ss_pred cccCcEEEEEeCCCcEEEEEee
Confidence 9999999999999999999864
No 142
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=5e-25 Score=191.98 Aligned_cols=240 Identities=14% Similarity=0.165 Sum_probs=182.3
Q ss_pred cccccCeEEcCCCCEEEEEeCCeEEEEecCCCc----EEEEee----cCcceeEEEEec-CCCeEEEEeccCCeEEEEEc
Q 014755 7 YKQTGPSCFSPNARYIAVAVDYRLVVRDAHSFK----VVQLFS----CLDKISYIEWAL-DSEYILCGLYKRLMIQAWSL 77 (419)
Q Consensus 7 ~~~~~~~~~s~d~~~la~~~~~~i~i~~~~~~~----~~~~~~----~~~~v~~~~~s~-~~~~l~~~~~~~g~i~iw~~ 77 (419)
.++...|+..++-..|+.++...+.||.+.... +...++ -.-.+..+.|.. +.++||+++.. |.|.+||+
T Consensus 39 k~~~nAIs~nr~~~qiv~AGrs~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~n-G~i~vWdl 117 (839)
T KOG0269|consen 39 KAKANAISVNRDINQIVVAGRSLLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTN-GVISVWDL 117 (839)
T ss_pred ccccceEeecCCcceeEEecccceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCC-CcEEEEec
Confidence 345555888899999999998888888775432 222212 112456778875 56788888866 99999999
Q ss_pred cC---CcceeeeecCCccEeEEEECCCC-CEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCC-CEEEEEe
Q 014755 78 TQ---PEWTCKIDEGLAGIAYARWSPDS-RHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDG-KFAAICT 151 (419)
Q Consensus 78 ~~---~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~-~~l~~~~ 151 (419)
.. .+.+..+..|...++++.|++.. .+|++|+.|+ .|++||++..+... +......+..+.|+|.. ..++++.
T Consensus 118 nk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg-~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~ 196 (839)
T KOG0269|consen 118 NKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDG-TVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIH 196 (839)
T ss_pred CccccchhhhHhhhhccceeeeeeccCCccEEEecCCCc-eEEEEeeecccccccccccchhhhceeeccCCCceEEEec
Confidence 87 45666788999999999999955 5566777777 99999999877666 66777888999999965 5555555
Q ss_pred ecCCCCeEEEEeccCC-eEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEE
Q 014755 152 RRDCKDYINLLSCHTW-EIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISW 230 (419)
Q Consensus 152 ~~~~~g~v~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~ 230 (419)
.. |.+++||++.. ++..++..|.++|.++.|+|++.+|++ ++.|+.|++||.++.....+..-....+|.++.|
T Consensus 197 ds---G~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lAT--GGRDK~vkiWd~t~~~~~~~~tInTiapv~rVkW 271 (839)
T KOG0269|consen 197 DS---GYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLAT--GGRDKMVKIWDMTDSRAKPKHTINTIAPVGRVKW 271 (839)
T ss_pred CC---ceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeee--cCCCccEEEEeccCCCccceeEEeecceeeeeee
Confidence 44 89999999974 456778899999999999999999999 7889999999995432222222222337999999
Q ss_pred ccCCC-eEEEEE--ecCcEEEEEcCC
Q 014755 231 SPCGQ-FLAVGS--YDQTLRVLNHLT 253 (419)
Q Consensus 231 s~~~~-~l~~~~--~d~~i~v~d~~~ 253 (419)
-|..+ .|++++ .|-.|+|||++.
T Consensus 272 RP~~~~hLAtcsmv~dtsV~VWDvrR 297 (839)
T KOG0269|consen 272 RPARSYHLATCSMVVDTSVHVWDVRR 297 (839)
T ss_pred ccCccchhhhhhccccceEEEEeecc
Confidence 99875 566665 367899999864
No 143
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.93 E-value=1.2e-22 Score=180.04 Aligned_cols=372 Identities=12% Similarity=0.127 Sum_probs=251.1
Q ss_pred eEEcCCCCEEEEEeCCeEEEEecCCCcEEEEee-cCcceeEEEEecCCC---eEEEEeccCCeEEEEEccCCcceeeeec
Q 014755 13 SCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSE---YILCGLYKRLMIQAWSLTQPEWTCKIDE 88 (419)
Q Consensus 13 ~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~---~l~~~~~~~g~i~iw~~~~~~~~~~~~~ 88 (419)
-.||+|++++.......|.||...+++++..+. |..++..+.+.|... ++.+.+.+ |.|++||...+++++.+..
T Consensus 22 avfSnD~k~l~~~~~~~V~VyS~~Tg~~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~-G~I~vwd~~~~~Llkt~~~ 100 (792)
T KOG1963|consen 22 AVFSNDAKFLFLCTGNFVKVYSTATGECITSLEDHTAPLTSVIVLPSSENANYLIVCSLD-GTIRVWDWSDGELLKTFDN 100 (792)
T ss_pred cccccCCcEEEEeeCCEEEEEecchHhhhhhcccccCccceeeecCCCccceEEEEEecC-ccEEEecCCCcEEEEEEec
Confidence 579999999999999999999999999998665 899999999988654 55677766 9999999987754433211
Q ss_pred --------------------------------------------------------------------------------
Q 014755 89 -------------------------------------------------------------------------------- 88 (419)
Q Consensus 89 -------------------------------------------------------------------------------- 88 (419)
T Consensus 101 ~~~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~~~~~~I~~~~~ge~~~i~~~ 180 (792)
T KOG1963|consen 101 NLPVHALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEHQEPKSIVDNNSGEFKGIVHM 180 (792)
T ss_pred CCceeEEEechhHhCccceeEeecccceeeeecccccccceeeeEeeeccccchhhhhhhcCCccEEEcCCceEEEEEEe
Confidence
Q ss_pred -----------------------CCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC-----CeEEEeccCCCCeeeEEE
Q 014755 89 -----------------------GLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN-----TACVHVQSPKHASKGVAF 140 (419)
Q Consensus 89 -----------------------~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~-----~~~~~~~~~~~~~~~~~~ 140 (419)
|...+++.+++|++++++++..+| +|.+|.--. ..+..+.-|...|.+++|
T Consensus 181 ~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dG-rI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~f 259 (792)
T KOG1963|consen 181 CKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSDG-RILVWRDFGSSDDSETCTLLHWHHDEVNSLSF 259 (792)
T ss_pred eeEEEEEecccceeeccchhhhhhcccceeEEeccccceEEEeccCC-cEEEEeccccccccccceEEEecccccceeEE
Confidence 344568899999999999998887 899995332 233447778889999999
Q ss_pred ccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeec
Q 014755 141 TQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAY 219 (419)
Q Consensus 141 ~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~ 219 (419)
+++|.+|++|+.. +.+.+|.+.+++ .+-+..-..+|..+.++||+.+.++ ...|+.|.+... +-.....+.+.
T Consensus 260 S~~G~~LlSGG~E---~VLv~Wq~~T~~-kqfLPRLgs~I~~i~vS~ds~~~sl--~~~DNqI~li~~~dl~~k~tIsgi 333 (792)
T KOG1963|consen 260 SSDGAYLLSGGRE---GVLVLWQLETGK-KQFLPRLGSPILHIVVSPDSDLYSL--VLEDNQIHLIKASDLEIKSTISGI 333 (792)
T ss_pred ecCCceEeecccc---eEEEEEeecCCC-cccccccCCeeEEEEEcCCCCeEEE--EecCceEEEEeccchhhhhhccCc
Confidence 9999999999986 899999999988 4445556788999999999999888 566999998887 44333333222
Q ss_pred C---------CCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeee
Q 014755 220 E---------SGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELC 290 (419)
Q Consensus 220 ~---------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (419)
. ...-.+.++++|.-+.++..+..|.|.+||+.+.+.+..+.....-..+... +. .+...+
T Consensus 334 ~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~---------n~-~v~ita 403 (792)
T KOG1963|consen 334 KPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDV---------NI-QVGITA 403 (792)
T ss_pred cCCCccccccccccceeEEEcCCCCceeecCCCceEEEEeccccceeeeEEEEeecccCCcc---------ee-EEeeee
Confidence 1 1124677899997778888999999999999988877766511110000000 00 000000
Q ss_pred cc----Ccccccc------ccccCCc-eEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEc-cCCe-EEEEecCCCCc
Q 014755 291 LN----DDFIQGN------SDATNGH-IKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWS-SDSQ-YICTRNDSMPT 357 (419)
Q Consensus 291 ~~----~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~g~-~l~~~~~d~~~ 357 (419)
+. +..+... ....+|. ....|...... +-..+..... ..|...+...++. |-.. ..++++.| |
T Consensus 404 v~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~-kt~~L~T~I~-~PH~~~~vat~~~~~~rs~~~vta~~d--g 479 (792)
T KOG1963|consen 404 VARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNS-KTFILNTKIN-NPHGNAFVATIFLNPTRSVRCVTASVD--G 479 (792)
T ss_pred ehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCc-ceeEEEEEEe-cCCCceeEEEEEecCcccceeEEeccC--C
Confidence 00 1111111 1111111 11222221111 1111111111 2355555555554 3333 78889888 9
Q ss_pred eEEEeeccCCCc---------eeecc--cCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCC
Q 014755 358 TLWIWDICRQEP---------AAILV--QKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSG 407 (419)
Q Consensus 358 ~i~iwd~~~~~~---------~~~~~--~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 407 (419)
.++||-+...+- ....+ |..++++++|+.||..| +++.|++|.+||..+
T Consensus 480 ~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dGsll-a~s~~~~Itiwd~~~ 539 (792)
T KOG1963|consen 480 DFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDGSLL-AVSFDDTITIWDYDT 539 (792)
T ss_pred eEEEEEEecccccCcCccceEEeeeeccccCcccchhhcCCCcEE-EEecCCEEEEecCCC
Confidence 999998843221 11112 78999999999999755 477789999999987
No 144
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.93 E-value=9.3e-26 Score=195.06 Aligned_cols=220 Identities=17% Similarity=0.241 Sum_probs=193.2
Q ss_pred CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEE
Q 014755 27 DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHIL 106 (419)
Q Consensus 27 ~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 106 (419)
.-.+++||... ...|...+.++..-..++.+++|+.+ -.+-+|.+.....+..+.+|..+|.++.|+++...|+
T Consensus 13 ~t~Lr~~~~~~-----~~~hsaav~~lk~~~s~r~~~~Gg~~-~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E~Lla 86 (825)
T KOG0267|consen 13 ATKLRVWDTRE-----FVAHSAAVGCLKIRKSSRSLVTGGED-EKVNLWAIGKPNAITSLTGHESPIESLTFDTSERLLA 86 (825)
T ss_pred eeccccccchh-----hhhhhhhhceeeeeccceeeccCCCc-eeeccccccCCchhheeeccCCcceeeecCcchhhhc
Confidence 34466776542 23477888888887788899999876 5888999988877778899999999999999999899
Q ss_pred EEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeE
Q 014755 107 TTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEW 185 (419)
Q Consensus 107 ~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~ 185 (419)
+++.++ +|++||++.++.++ +.+|...+..+.|+|-+.+.+.++.| ..+.+||.+...+...+.+|...+..+.|
T Consensus 87 agsasg-tiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStd---td~~iwD~Rk~Gc~~~~~s~~~vv~~l~l 162 (825)
T KOG0267|consen 87 AGSASG-TIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTD---TDLKIWDIRKKGCSHTYKSHTRVVDVLRL 162 (825)
T ss_pred ccccCC-ceeeeehhhhhhhhhhhccccCcceeeeccceEEecccccc---ccceehhhhccCceeeecCCcceeEEEee
Confidence 988887 99999999988888 89999999999999999999988887 78999999988899999999999999999
Q ss_pred CCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeee
Q 014755 186 SPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEF 260 (419)
Q Consensus 186 ~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 260 (419)
+|+|++++. ++.|..+++||+ .|+.+..|..|.. .+..+.|+|..-+++.|+.|+++++||+++.+.+...
T Consensus 163 sP~Gr~v~~--g~ed~tvki~d~~agk~~~ef~~~e~--~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~ 234 (825)
T KOG0267|consen 163 SPDGRWVAS--GGEDNTVKIWDLTAGKLSKEFKSHEG--KVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSG 234 (825)
T ss_pred cCCCceeec--cCCcceeeeecccccccccccccccc--cccccccCchhhhhccCCCCceeeeeccceeEEeecc
Confidence 999999988 777899999999 8999999988776 7999999999999999999999999999886665554
No 145
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.93 E-value=3.1e-23 Score=167.85 Aligned_cols=304 Identities=12% Similarity=0.199 Sum_probs=205.9
Q ss_pred cCcceeEEEEecCCC-eEEEEeccCCeEEEEEccCCc---------ceeeeecCCccEeEEEECCCCCEEEEEecCCCeE
Q 014755 46 CLDKISYIEWALDSE-YILCGLYKRLMIQAWSLTQPE---------WTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRL 115 (419)
Q Consensus 46 ~~~~v~~~~~s~~~~-~l~~~~~~~g~i~iw~~~~~~---------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i 115 (419)
...+|.++.|.+++. .+++|+.| ..|++|.++.++ ....+..|...|+.+.|+|+|+.|+++++++ .+
T Consensus 12 ~~~pv~s~dfq~n~~~~laT~G~D-~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g-~v 89 (434)
T KOG1009|consen 12 DHEPVYSVDFQKNSLNKLATAGGD-KDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGG-EV 89 (434)
T ss_pred CCCceEEEEeccCcccceecccCc-cceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCc-eE
Confidence 456899999999877 99999988 699999987542 2345678999999999999999999998877 99
Q ss_pred EEEEcC--------C-----C-eE--EE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEecccc
Q 014755 116 TVWSLL--------N-----T-AC--VH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTL 178 (419)
Q Consensus 116 ~iwd~~--------~-----~-~~--~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~ 178 (419)
.+|... + . .. .+ +.+|...+..++|+|++.++++++.| ..+++||+..|+....+..|..
T Consensus 90 ~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~d---ns~~l~Dv~~G~l~~~~~dh~~ 166 (434)
T KOG1009|consen 90 FLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVD---NSVRLWDVHAGQLLAILDDHEH 166 (434)
T ss_pred EEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeecc---ceEEEEEeccceeEeecccccc
Confidence 999766 2 1 11 11 66788899999999999999999987 7999999999999999999999
Q ss_pred ceeeeeECCCCCeEEEEcCCCCceEEEEcCCC-ce---------------------EEEEeecCCCCceeEEEEccCCCe
Q 014755 179 DLADIEWSPDDSAIVIWDSPLEYKVLIYSPDG-RC---------------------LLKYQAYESGLGVKSISWSPCGQF 236 (419)
Q Consensus 179 ~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~-~~---------------------~~~~~~~~~~~~v~~~~~s~~~~~ 236 (419)
.+..++|.|-+++++. .+.+...+.+++.- +. .+.+.......-...++|+|+|.+
T Consensus 167 yvqgvawDpl~qyv~s--~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~l 244 (434)
T KOG1009|consen 167 YVQGVAWDPLNQYVAS--KSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSL 244 (434)
T ss_pred ccceeecchhhhhhhh--hccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcE
Confidence 9999999999999887 45555555554411 11 111111111123456788888888
Q ss_pred EEEEEe----cCc-----EEEEEcCC-ceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCc
Q 014755 237 LAVGSY----DQT-----LRVLNHLT-WKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGH 306 (419)
Q Consensus 237 l~~~~~----d~~-----i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (419)
+++.+. .+. .++|+-.. .++...+..+. -+.-.+.|.+
T Consensus 245 lvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~---k~~lavr~~p----------------------------- 292 (434)
T KOG1009|consen 245 LVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPK---KPALAVRFSP----------------------------- 292 (434)
T ss_pred EEcccceeeeCCceeeceeEeeccccccCceeecCCCC---cceEEEEeee-----------------------------
Confidence 877542 111 12222110 00000000000 0000011110
Q ss_pred eEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc--cCCCeeEEEe
Q 014755 307 IKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV--QKDPIRAATW 384 (419)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~--~~~~v~~~~~ 384 (419)
..|.+.... .... +---|-+..+|.++. +.|+|||.++.+++.... |...|+.++|
T Consensus 293 --Vy~elrp~~---------------~~~~--~~~lpyrlvfaiAt~---~svyvydtq~~~P~~~v~nihy~~iTDiaw 350 (434)
T KOG1009|consen 293 --VYYELRPLS---------------SEKF--LFVLPYRLVFAIATK---NSVYVYDTQTLEPLAVVDNIHYSAITDIAW 350 (434)
T ss_pred --eEEEecccc---------------cccc--ccccccceEEEEeec---ceEEEeccccccceEEEeeeeeeeecceee
Confidence 011111000 0000 111255667788887 699999999988887774 9999999999
Q ss_pred CCCCCeEEEEeCCCcEEEeecCCCeE
Q 014755 385 DPTCTRLVLCTGSSHLYMWTPSGAYC 410 (419)
Q Consensus 385 s~~~~~l~s~~~dg~i~vw~~~~~~~ 410 (419)
++||..|+..|.||...+-.++..++
T Consensus 351 s~dg~~l~vSS~DGyCS~vtfe~~el 376 (434)
T KOG1009|consen 351 SDDGSVLLVSSTDGFCSLVTFEPWEL 376 (434)
T ss_pred cCCCcEEEEeccCCceEEEEEcchhc
Confidence 99999999999999888877775443
No 146
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.93 E-value=1.3e-23 Score=179.33 Aligned_cols=286 Identities=14% Similarity=0.175 Sum_probs=200.2
Q ss_pred eEEEEec--CCCeEEEEeccCCeEEEEEccCCcce------eeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC
Q 014755 51 SYIEWAL--DSEYILCGLYKRLMIQAWSLTQPEWT------CKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN 122 (419)
Q Consensus 51 ~~~~~s~--~~~~l~~~~~~~g~i~iw~~~~~~~~------~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~ 122 (419)
.+..|++ +.+.+++.+.++|.|.++|....... .....|.+.|..+.|.|....|++++.|. ++++||+++
T Consensus 53 f~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDs-T~r~Wdvk~ 131 (720)
T KOG0321|consen 53 FADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDS-TIRPWDVKT 131 (720)
T ss_pred ccccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCc-eeeeeeecc
Confidence 3466765 34444444445699999998755332 44567999999999999777788888888 999999999
Q ss_pred CeEEE---eccCCCCeeeEEEccCC-CEEEEEeecCCCCeEEEEeccCCe--------------------E-------EE
Q 014755 123 TACVH---VQSPKHASKGVAFTQDG-KFAAICTRRDCKDYINLLSCHTWE--------------------I-------MG 171 (419)
Q Consensus 123 ~~~~~---~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~g~v~i~d~~~~~--------------------~-------~~ 171 (419)
.++.. ..+|...+.+++|.|.. ..+++|+.| |.|.|||++-.. + +.
T Consensus 132 s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRD---g~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~ 208 (720)
T KOG0321|consen 132 SRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRD---GEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIR 208 (720)
T ss_pred ceeecceeecccccccchhhhccCCCcceeeccCC---CcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhcccc
Confidence 87766 67899999999999987 456667776 899999997422 0 00
Q ss_pred EEeccccceee---eeECCCCCeEEEEcCCCCceEEEEcC-CCc------eEEEEeecCC---CCceeEEEEccCCCeEE
Q 014755 172 VFAVDTLDLAD---IEWSPDDSAIVIWDSPLEYKVLIYSP-DGR------CLLKYQAYES---GLGVKSISWSPCGQFLA 238 (419)
Q Consensus 172 ~~~~~~~~v~~---~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~------~~~~~~~~~~---~~~v~~~~~s~~~~~l~ 238 (419)
....+...|.+ +.+..|...|+.+. ..|+.|++||+ ... .......+.+ ...+.++..+..|.+|.
T Consensus 209 k~kA~s~ti~ssvTvv~fkDe~tlaSag-a~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~ 287 (720)
T KOG0321|consen 209 KWKAASNTIFSSVTVVLFKDESTLASAG-AADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLF 287 (720)
T ss_pred ccccccCceeeeeEEEEEeccceeeecc-CCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEE
Confidence 11122333444 55567888888754 35999999999 222 1111111111 23577888888899998
Q ss_pred EEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCC
Q 014755 239 VGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPI 318 (419)
Q Consensus 239 ~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (419)
+.+.|+.|+.|++.+...--... |+ |....
T Consensus 288 AsCtD~sIy~ynm~s~s~sP~~~-------------~s----------------------------g~~~~--------- 317 (720)
T KOG0321|consen 288 ASCTDNSIYFYNMRSLSISPVAE-------------FS----------------------------GKLNS--------- 317 (720)
T ss_pred EEecCCcEEEEeccccCcCchhh-------------cc----------------------------Ccccc---------
Confidence 88889999999987633211111 00 00000
Q ss_pred CCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCc--eeecccCCCeeEEEeCCCCC-eEEEEe
Q 014755 319 SLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEP--AAILVQKDPIRAATWDPTCT-RLVLCT 395 (419)
Q Consensus 319 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~--~~~~~~~~~v~~~~~s~~~~-~l~s~~ 395 (419)
..-..-..|||+.++++|+.| ...++|.+.+.+. ..+++|...|++++|.|... -+++++
T Consensus 318 ---------------sf~vks~lSpd~~~l~SgSsd--~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t~v~TcS 380 (720)
T KOG0321|consen 318 ---------------SFYVKSELSPDDCSLLSGSSD--EQAYIWVVSSPEAPPALLLGHTREVTTVRWLPSATTPVATCS 380 (720)
T ss_pred ---------------eeeeeeecCCCCceEeccCCC--cceeeeeecCccCChhhhhCcceEEEEEeeccccCCCceeec
Confidence 001223568999999999999 9999999998664 34558999999999987543 577889
Q ss_pred CCCcEEEeecCCC
Q 014755 396 GSSHLYMWTPSGA 408 (419)
Q Consensus 396 ~dg~i~vw~~~~~ 408 (419)
+|.++++|++..+
T Consensus 381 dD~~~kiW~l~~~ 393 (720)
T KOG0321|consen 381 DDFRVKIWRLSNG 393 (720)
T ss_pred cCcceEEEeccCc
Confidence 9999999999743
No 147
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.93 E-value=2.8e-23 Score=170.62 Aligned_cols=290 Identities=12% Similarity=0.149 Sum_probs=209.8
Q ss_pred cCcceeEEEEecCCC--eEEEEeccCCeEEEEEccCC----cceeeeecCCccEeEEEECC-CCCEEEEEecCCCeEEEE
Q 014755 46 CLDKISYIEWALDSE--YILCGLYKRLMIQAWSLTQP----EWTCKIDEGLAGIAYARWSP-DSRHILTTSDFQLRLTVW 118 (419)
Q Consensus 46 ~~~~v~~~~~s~~~~--~l~~~~~~~g~i~iw~~~~~----~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~i~iw 118 (419)
+.++|++++|+|... .+|+|. ..|.|-+||+.+. .-+..+..|..+|.++.|+| +...+++.+.|| +|++-
T Consensus 185 ~~~Rit~l~fHPt~~~~lva~Gd-K~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDG-tiR~~ 262 (498)
T KOG4328|consen 185 TDRRITSLAFHPTENRKLVAVGD-KGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDG-TIRLQ 262 (498)
T ss_pred cccceEEEEecccCcceEEEEcc-CCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCc-eeeee
Confidence 778999999999654 555555 4599999999532 22445678899999999999 446678888887 99999
Q ss_pred EcCCCeEEE-ecc--CCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeE-EEEEeccccceeeeeECCCCCeEEE
Q 014755 119 SLLNTACVH-VQS--PKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEI-MGVFAVDTLDLADIEWSPDDSAIVI 194 (419)
Q Consensus 119 d~~~~~~~~-~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~ 194 (419)
|++++.... +.. .......+.|+.+...++++..- |...+||+++... ...+..|...|..++++|...+++.
T Consensus 263 D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~---G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~la 339 (498)
T KOG4328|consen 263 DFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNV---GNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLA 339 (498)
T ss_pred eecchhhHHHhhcCccceeeeeccccCCCccEEEeecc---cceEEEEeecCCccchhhhhhhcccceeecCCCCchhee
Confidence 999865444 222 33344788888888777777654 7899999998554 6677788889999999998876654
Q ss_pred EcCCCCceEEEEcC---CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcC----Cceeeeeeccccccc
Q 014755 195 WDSPLEYKVLIYSP---DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHL----TWKTFAEFMHLSTVR 267 (419)
Q Consensus 195 ~~~~~~~~i~~~d~---~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~----~~~~~~~~~~~~~~~ 267 (419)
. ++.|++.++||+ .++.-..+....|...|.+..|||.+-.|++.+.|..|+|||.. ...++..+.|....
T Consensus 340 T-~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~Hn~~t- 417 (498)
T KOG4328|consen 340 T-ASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIPHNNRT- 417 (498)
T ss_pred e-cccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceeeccCcc-
Confidence 3 677999999999 33331123344455589999999988789999999999999973 23333333332211
Q ss_pred CCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeE
Q 014755 268 GPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQY 347 (419)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 347 (419)
-. |. .....+|.|+..+
T Consensus 418 -----~R---------------------------------------------------------wl-T~fKA~W~P~~~l 434 (498)
T KOG4328|consen 418 -----GR---------------------------------------------------------WL-TPFKAAWDPDYNL 434 (498)
T ss_pred -----cc---------------------------------------------------------cc-cchhheeCCCccE
Confidence 00 10 1234689999999
Q ss_pred EEEecCCCCceEEEeeccCCCceeec-c-cCCCeeEE-EeCCCCCeEEEE-eCCCcEEEeecCC
Q 014755 348 ICTRNDSMPTTLWIWDICRQEPAAIL-V-QKDPIRAA-TWDPTCTRLVLC-TGSSHLYMWTPSG 407 (419)
Q Consensus 348 l~~~~~d~~~~i~iwd~~~~~~~~~~-~-~~~~v~~~-~~s~~~~~l~s~-~~dg~i~vw~~~~ 407 (419)
+++|..- ..|-|+|-..++.+..+ . ....|.++ .|+|-+..+++| +..|.|+||.-++
T Consensus 435 i~vg~~~--r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~~~~~aG~~s~Gki~vft~k~ 496 (498)
T KOG4328|consen 435 IVVGRYP--RPIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMRDTLAAGGNSSGKIYVFTNKK 496 (498)
T ss_pred EEEeccC--cceeEEcCCCCEEeeeccCccccccccceeecccccceeccCCccceEEEEecCC
Confidence 9999876 88999999888855543 3 33356654 899998855555 4578899887654
No 148
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.92 E-value=1.2e-23 Score=180.74 Aligned_cols=276 Identities=14% Similarity=0.154 Sum_probs=216.6
Q ss_pred ceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEe
Q 014755 49 KISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHV 128 (419)
Q Consensus 49 ~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~ 128 (419)
.|+.++|-|||..|+.+.. ..+.+||.+.|....++++|.+.|.+++|+.||+.+++|+.|+ .|.+|.-+-.-.++
T Consensus 14 ci~d~afkPDGsqL~lAAg--~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK-~VI~W~~klEG~Lk- 89 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAAG--SRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADK-SVIIWTSKLEGILK- 89 (1081)
T ss_pred chheeEECCCCceEEEecC--CEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCce-eEEEecccccceee-
Confidence 7999999999999988874 4799999999999999999999999999999999999999998 99999876544333
Q ss_pred ccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC
Q 014755 129 QSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP 208 (419)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~ 208 (419)
..|...+.|+.|+|-...+++++-+ ..-+|........+. .....+.+.+|..||+++++ +-.+|+|.+-+.
T Consensus 90 YSH~D~IQCMsFNP~~h~LasCsLs----dFglWS~~qK~V~K~--kss~R~~~CsWtnDGqylal--G~~nGTIsiRNk 161 (1081)
T KOG1538|consen 90 YSHNDAIQCMSFNPITHQLASCSLS----DFGLWSPEQKSVSKH--KSSSRIICCSWTNDGQYLAL--GMFNGTISIRNK 161 (1081)
T ss_pred eccCCeeeEeecCchHHHhhhcchh----hccccChhhhhHHhh--hhheeEEEeeecCCCcEEEE--eccCceEEeecC
Confidence 4688899999999999999998874 677888765332221 12356889999999999999 778999999998
Q ss_pred CCceEEEEeec-CCCCceeEEEEccCC-----CeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcc
Q 014755 209 DGRCLLKYQAY-ESGLGVKSISWSPCG-----QFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPL 282 (419)
Q Consensus 209 ~~~~~~~~~~~-~~~~~v~~~~~s~~~-----~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (419)
.|+....+... ....+|.+++|+|.. ..+++.....++.+|.+. |+.+..- ..+.|.
T Consensus 162 ~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~Ls-G~~Igk~----------r~L~Fd------ 224 (1081)
T KOG1538|consen 162 NGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLS-GKQIGKD----------RALNFD------ 224 (1081)
T ss_pred CCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEec-ceeeccc----------ccCCCC------
Confidence 77665555442 234589999999964 356666666777776654 2222110 011122
Q ss_pred cccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEe
Q 014755 283 QLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIW 362 (419)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iw 362 (419)
-.|+.+-|+|.|+..|+.| +.+++|
T Consensus 225 -----------------------------------------------------P~CisYf~NGEy~LiGGsd--k~L~~f 249 (1081)
T KOG1538|consen 225 -----------------------------------------------------PCCISYFTNGEYILLGGSD--KQLSLF 249 (1081)
T ss_pred -----------------------------------------------------chhheeccCCcEEEEccCC--CceEEE
Confidence 2578899999999999999 999999
Q ss_pred eccCCCceeecc-cCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCe
Q 014755 363 DICRQEPAAILV-QKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAY 409 (419)
Q Consensus 363 d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~ 409 (419)
..+ |-.+.+.+ ....|+.++..|+++.++.|+.||+|..|++....
T Consensus 250 TR~-GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~fST 296 (1081)
T KOG1538|consen 250 TRD-GVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQDGTIACYNLIFST 296 (1081)
T ss_pred eec-CeEEeeccccceeEEEEEEccCCceEEEEEccCeeehhhhHHhH
Confidence 754 44444444 77899999999999999999999999999986443
No 149
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=1.4e-25 Score=194.00 Aligned_cols=243 Identities=14% Similarity=0.272 Sum_probs=208.3
Q ss_pred CeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEE
Q 014755 70 LMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAA 148 (419)
Q Consensus 70 g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~ 148 (419)
-.+++||.. ....|...+.++..-..++.+++|+.+. .+.+|.+.....+. +.+|..+|.++.|+++..+|+
T Consensus 14 t~Lr~~~~~------~~~~hsaav~~lk~~~s~r~~~~Gg~~~-k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E~Lla 86 (825)
T KOG0267|consen 14 TKLRVWDTR------EFVAHSAAVGCLKIRKSSRSLVTGGEDE-KVNLWAIGKPNAITSLTGHESPIESLTFDTSERLLA 86 (825)
T ss_pred eccccccch------hhhhhhhhhceeeeeccceeeccCCCce-eeccccccCCchhheeeccCCcceeeecCcchhhhc
Confidence 467778754 3346777788887766778888888887 88899987765555 799999999999999999999
Q ss_pred EEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeE
Q 014755 149 ICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKS 227 (419)
Q Consensus 149 ~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~ 227 (419)
.|..+ |+|++||+...+.++.+.+|...+.++.|+|-+.+.+. ++.|..+.+||. ...+.+.+..|.. .+..
T Consensus 87 agsas---gtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~--gStdtd~~iwD~Rk~Gc~~~~~s~~~--vv~~ 159 (825)
T KOG0267|consen 87 AGSAS---GTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFAS--GSTDTDLKIWDIRKKGCSHTYKSHTR--VVDV 159 (825)
T ss_pred ccccC---CceeeeehhhhhhhhhhhccccCcceeeeccceEEecc--ccccccceehhhhccCceeeecCCcc--eeEE
Confidence 99887 89999999999999999999999999999999999876 777999999999 5678888887555 7999
Q ss_pred EEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCce
Q 014755 228 ISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHI 307 (419)
Q Consensus 228 ~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (419)
+.|+|+|++++.+++|.++++||+..|+.+.+|.
T Consensus 160 l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~---------------------------------------------- 193 (825)
T KOG0267|consen 160 LRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFK---------------------------------------------- 193 (825)
T ss_pred EeecCCCceeeccCCcceeeeecccccccccccc----------------------------------------------
Confidence 9999999999999999999999999988887765
Q ss_pred EEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc-cCCCeeEEEeCC
Q 014755 308 KVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV-QKDPIRAATWDP 386 (419)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~ 386 (419)
.|.+.+..+.|+|..-+++.|+.| +++++||+++-+++...+ ....|.+.+|+|
T Consensus 194 -----------------------~~e~~v~sle~hp~e~Lla~Gs~d--~tv~f~dletfe~I~s~~~~~~~v~~~~fn~ 248 (825)
T KOG0267|consen 194 -----------------------SHEGKVQSLEFHPLEVLLAPGSSD--RTVRFWDLETFEVISSGKPETDGVRSLAFNP 248 (825)
T ss_pred -----------------------cccccccccccCchhhhhccCCCC--ceeeeeccceeEEeeccCCccCCceeeeecC
Confidence 366667888899999999999999 999999999877776554 677899999999
Q ss_pred CCCeEEEEeCC
Q 014755 387 TCTRLVLCTGS 397 (419)
Q Consensus 387 ~~~~l~s~~~d 397 (419)
+++.+++|...
T Consensus 249 ~~~~~~~G~q~ 259 (825)
T KOG0267|consen 249 DGKIVLSGEQI 259 (825)
T ss_pred CceeeecCchh
Confidence 99988877544
No 150
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=99.92 E-value=7.9e-23 Score=160.84 Aligned_cols=238 Identities=12% Similarity=0.112 Sum_probs=177.6
Q ss_pred cccCeEEcCCCCEEEEEe-CCeEEEEecCCC-------cE-------EEEeecCcceeEEEEe-------cCCCeEEEEe
Q 014755 9 QTGPSCFSPNARYIAVAV-DYRLVVRDAHSF-------KV-------VQLFSCLDKISYIEWA-------LDSEYILCGL 66 (419)
Q Consensus 9 ~~~~~~~s~d~~~la~~~-~~~i~i~~~~~~-------~~-------~~~~~~~~~v~~~~~s-------~~~~~l~~~~ 66 (419)
....+.|||||.-|.+-+ ++.+.+|++... .. ...+.....|..-+|- |+..++|+.+
T Consensus 51 f~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ss 130 (406)
T KOG2919|consen 51 FLKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSS 130 (406)
T ss_pred hhccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeecc
Confidence 334489999999999888 788999987521 11 1112234567777774 5777888888
Q ss_pred ccCCeEEEEEccCCcceeeeec--CCc---cEeEEEECCCCCEEEEEecCCCeEEEEEc-CCCeEEE---e-----ccCC
Q 014755 67 YKRLMIQAWSLTQPEWTCKIDE--GLA---GIAYARWSPDSRHILTTSDFQLRLTVWSL-LNTACVH---V-----QSPK 132 (419)
Q Consensus 67 ~~~g~i~iw~~~~~~~~~~~~~--~~~---~v~~~~~~~~~~~l~~~~~~~~~i~iwd~-~~~~~~~---~-----~~~~ 132 (419)
.+ .-|++||.-+|+....+.. |.. ...+++|+|||.+|+++-. . .|+++|+ +.|.--. . .+..
T Consensus 131 r~-~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGyk-r-cirvFdt~RpGr~c~vy~t~~~~k~gq~ 207 (406)
T KOG2919|consen 131 RD-QPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGYK-R-CIRVFDTSRPGRDCPVYTTVTKGKFGQK 207 (406)
T ss_pred cc-CceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeeccc-c-eEEEeeccCCCCCCcchhhhhccccccc
Confidence 77 6999999999987766543 333 3568999999999988765 3 8999999 4443211 1 1223
Q ss_pred CCeeeEEEccCC-CEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC--C
Q 014755 133 HASKGVAFTQDG-KFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP--D 209 (419)
Q Consensus 133 ~~~~~~~~~~~~-~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~--~ 209 (419)
+-+.+++|+|-. ..+++++.. ..+-||.-..+.++..+-+|.+.|+.+.|.++|+.+++. +..+..|..||+ .
T Consensus 208 giisc~a~sP~~~~~~a~gsY~---q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsG-aRk~dkIl~WDiR~~ 283 (406)
T KOG2919|consen 208 GIISCFAFSPMDSKTLAVGSYG---QRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSG-ARKDDKILCWDIRYS 283 (406)
T ss_pred ceeeeeeccCCCCcceeeeccc---ceeeeEecCCCCceeeecccCCCeeeEEeccCcCeeccc-ccCCCeEEEEeehhc
Confidence 445899999976 488888875 688888888889999999999999999999999999874 345789999999 5
Q ss_pred CceEEEEeecCC-CCceeEEEEccCCCeEEEEEecCcEEEEEcCC
Q 014755 210 GRCLLKYQAYES-GLGVKSISWSPCGQFLAVGSYDQTLRVLNHLT 253 (419)
Q Consensus 210 ~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~ 253 (419)
+.++..+..|.. ...-.-+...|++++|++|+.||.|++||+..
T Consensus 284 ~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~ 328 (406)
T KOG2919|consen 284 RDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKD 328 (406)
T ss_pred cchhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCC
Confidence 666666655543 22223456678999999999999999999876
No 151
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=99.92 E-value=7.4e-23 Score=161.01 Aligned_cols=270 Identities=15% Similarity=0.235 Sum_probs=195.4
Q ss_pred ceeEEEEecCCCeEEEEeccCCeEEEEEccCCc------------ceeeee-cCCccEeEEEEC-------CCCCEEEEE
Q 014755 49 KISYIEWALDSEYILCGLYKRLMIQAWSLTQPE------------WTCKID-EGLAGIAYARWS-------PDSRHILTT 108 (419)
Q Consensus 49 ~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~------------~~~~~~-~~~~~v~~~~~~-------~~~~~l~~~ 108 (419)
-...+.|||||..|++-+.| ..+++|++...- ....+. .....|...+|- |+..++++.
T Consensus 51 f~kgckWSPDGSciL~~sed-n~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~s 129 (406)
T KOG2919|consen 51 FLKGCKWSPDGSCILSLSED-NCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVS 129 (406)
T ss_pred hhccceeCCCCceEEeeccc-CeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeec
Confidence 45678999999999999987 599999985220 011111 122346677774 677788888
Q ss_pred ecCCCeEEEEEcCCCeEEE-e--ccCCCC---eeeEEEccCCCEEEEEeecCCCCeEEEEec-cCCeEEEEEe-------
Q 014755 109 SDFQLRLTVWSLLNTACVH-V--QSPKHA---SKGVAFTQDGKFAAICTRRDCKDYINLLSC-HTWEIMGVFA------- 174 (419)
Q Consensus 109 ~~~~~~i~iwd~~~~~~~~-~--~~~~~~---~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~-~~~~~~~~~~------- 174 (419)
+.+. -|.+||.-+|+... + ..|... ..+++|+|||.+|++|.. ..|+++|+ +.|.....+.
T Consensus 130 sr~~-PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGyk----rcirvFdt~RpGr~c~vy~t~~~~k~ 204 (406)
T KOG2919|consen 130 SRDQ-PIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGYK----RCIRVFDTSRPGRDCPVYTTVTKGKF 204 (406)
T ss_pred cccC-ceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeeccc----ceEEEeeccCCCCCCcchhhhhcccc
Confidence 8887 99999999988766 2 223333 389999999999999875 59999999 5554332221
Q ss_pred ccccceeeeeECCCCC-eEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEe-cCcEEEEEc
Q 014755 175 VDTLDLADIEWSPDDS-AIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSY-DQTLRVLNH 251 (419)
Q Consensus 175 ~~~~~v~~~~~~~~~~-~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d~~i~v~d~ 251 (419)
+..+.+.+++|+|... .+++ ++-...+-+|.- .+.++..+.+|.. .|+.+.|.++|+.|.+|+. |..|..||+
T Consensus 205 gq~giisc~a~sP~~~~~~a~--gsY~q~~giy~~~~~~pl~llggh~g--GvThL~~~edGn~lfsGaRk~dkIl~WDi 280 (406)
T KOG2919|consen 205 GQKGIISCFAFSPMDSKTLAV--GSYGQRVGIYNDDGRRPLQLLGGHGG--GVTHLQWCEDGNKLFSGARKDDKILCWDI 280 (406)
T ss_pred cccceeeeeeccCCCCcceee--ecccceeeeEecCCCCceeeecccCC--CeeeEEeccCcCeecccccCCCeEEEEee
Confidence 2246688999999766 6666 555666777766 6667777776665 8999999999999999875 668999999
Q ss_pred CCc-eeeeeec-ccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCC
Q 014755 252 LTW-KTFAEFM-HLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDK 329 (419)
Q Consensus 252 ~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (419)
+.. .++..+. |.... +++
T Consensus 281 R~~~~pv~~L~rhv~~T---------------------------------------NQR--------------------- 300 (406)
T KOG2919|consen 281 RYSRDPVYALERHVGDT---------------------------------------NQR--------------------- 300 (406)
T ss_pred hhccchhhhhhhhccCc---------------------------------------cce---------------------
Confidence 753 3333332 11100 111
Q ss_pred CCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccC-CCceeecc-cCCCeeEEEeCCCCCeEEEEeCC
Q 014755 330 PNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICR-QEPAAILV-QKDPIRAATWDPTCTRLVLCTGS 397 (419)
Q Consensus 330 ~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~-~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~d 397 (419)
--....|++++||+|+.| |.|++||+++ +.....++ |...++.++++|--.++|+++..
T Consensus 301 -------I~FDld~~~~~LasG~td--G~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~mpilatssGq 361 (406)
T KOG2919|consen 301 -------ILFDLDPKGEILASGDTD--GSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPIMPILATSSGQ 361 (406)
T ss_pred -------EEEecCCCCceeeccCCC--ccEEEEecCCCCCcccccccccccccceecCcccceeeeccCc
Confidence 112346899999999998 9999999998 77565554 99999999999998899988754
No 152
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.92 E-value=5.1e-24 Score=185.75 Aligned_cols=283 Identities=16% Similarity=0.292 Sum_probs=211.2
Q ss_pred CcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcce--eeee--cCC---ccEeEEEECC-CCCEEEEEecCCCeEEEE
Q 014755 47 LDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWT--CKID--EGL---AGIAYARWSP-DSRHILTTSDFQLRLTVW 118 (419)
Q Consensus 47 ~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~--~~~~--~~~---~~v~~~~~~~-~~~~l~~~~~~~~~i~iw 118 (419)
......|+..++-..++.++. ..+.|+.+...... ..+. ... -.+..+.|.. +.++|++++..+ .|.+|
T Consensus 39 k~~~nAIs~nr~~~qiv~AGr--s~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG-~i~vW 115 (839)
T KOG0269|consen 39 KAKANAISVNRDINQIVVAGR--SLLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNG-VISVW 115 (839)
T ss_pred ccccceEeecCCcceeEEecc--cceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCC-cEEEE
Confidence 456778888899888888874 47888887644221 1111 111 1355677875 567788888877 99999
Q ss_pred EcCC---CeEEE-eccCCCCeeeEEEccCC-CEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEE
Q 014755 119 SLLN---TACVH-VQSPKHASKGVAFTQDG-KFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIV 193 (419)
Q Consensus 119 d~~~---~~~~~-~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 193 (419)
|+.. .+.+. +..|...+++++|++.. .+|++|+.| |.|++||++..+....+......|+.+.|+|.....+
T Consensus 116 dlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQD---g~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F 192 (839)
T KOG0269|consen 116 DLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQD---GTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKF 192 (839)
T ss_pred ecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCC---ceEEEEeeecccccccccccchhhhceeeccCCCceE
Confidence 9987 33333 78899999999999876 667778877 8999999999988888888889999999999754443
Q ss_pred EEcCCCCceEEEEcC--CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCc
Q 014755 194 IWDSPLEYKVLIYSP--DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCF 271 (419)
Q Consensus 194 ~~~~~~~~~i~~~d~--~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~ 271 (419)
+. ....|.+.+||+ ..++...+..|.+ +|.++.|+|++.+||+|+.|+.|+|||..+.+...... +
T Consensus 193 ~s-~~dsG~lqlWDlRqp~r~~~k~~AH~G--pV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~t----I----- 260 (839)
T KOG0269|consen 193 AS-IHDSGYLQLWDLRQPDRCEKKLTAHNG--PVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHT----I----- 260 (839)
T ss_pred EE-ecCCceEEEeeccCchhHHHHhhcccC--ceEEEeecCCCceeeecCCCccEEEEeccCCCccceeE----E-----
Confidence 31 456799999999 5567777777776 99999999999999999999999999987644322111 0
Q ss_pred cceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeE-EEE
Q 014755 272 PAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQY-ICT 350 (419)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~-l~~ 350 (419)
....+|.+++|-|+.++ ||+
T Consensus 261 -----------------------------------------------------------nTiapv~rVkWRP~~~~hLAt 281 (839)
T KOG0269|consen 261 -----------------------------------------------------------NTIAPVGRVKWRPARSYHLAT 281 (839)
T ss_pred -----------------------------------------------------------eecceeeeeeeccCccchhhh
Confidence 02235788999998765 555
Q ss_pred ecCCCCceEEEeeccCCCce-eec-ccCCCeeEEEeCC-CCCeEEEEeCCCcEEEeecC
Q 014755 351 RNDSMPTTLWIWDICRQEPA-AIL-VQKDPIRAATWDP-TCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 351 ~~~d~~~~i~iwd~~~~~~~-~~~-~~~~~v~~~~~s~-~~~~l~s~~~dg~i~vw~~~ 406 (419)
++.-.+..|+|||++..-+. ..+ .|...++.++|-. |-..|.+++.||+|..-.++
T Consensus 282 csmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~qh~~k 340 (839)
T KOG0269|consen 282 CSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVLQHLFK 340 (839)
T ss_pred hhccccceEEEEeeccccccceeeeccCccccceeccCCCceeeEeecCccHHHHhhhh
Confidence 54322389999999876533 333 5999999999965 44488999999988766655
No 153
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.92 E-value=2.4e-22 Score=157.01 Aligned_cols=248 Identities=15% Similarity=0.241 Sum_probs=183.6
Q ss_pred ecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC--CeEE--E-eccCCCCeeeEEEcc--CCCEEEEEeecCCCCeE
Q 014755 87 DEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN--TACV--H-VQSPKHASKGVAFTQ--DGKFAAICTRRDCKDYI 159 (419)
Q Consensus 87 ~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~--~~~~--~-~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~g~v 159 (419)
.+|.+-|+++.|.+-|+++++|+.|. +++|||.+. +... . ...|.+.+..+.|.+ -|+.+|+++.| +++
T Consensus 10 s~h~DlihdVs~D~~GRRmAtCSsDq-~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~D---rtv 85 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYGRRMATCSSDQ-TVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYD---RTV 85 (361)
T ss_pred cCCcceeeeeeecccCceeeeccCCC-cEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecC---Cce
Confidence 46777899999999999999999998 999999754 2222 2 678999999999965 37999999998 899
Q ss_pred EEEecc---------CCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEE------Ee-----e
Q 014755 160 NLLSCH---------TWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLK------YQ-----A 218 (419)
Q Consensus 160 ~i~d~~---------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~------~~-----~ 218 (419)
.||.-. .+.....+......|+.+.|.|...-+..+..+.||.+++|+. +-..+.. ++ .
T Consensus 86 ~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp 165 (361)
T KOG2445|consen 86 SIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPP 165 (361)
T ss_pred eeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCc
Confidence 999762 2344556666778899999999755444444788999999997 3222221 11 1
Q ss_pred cCCCCceeEEEEccC---CCeEEEEEec-----CcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeee
Q 014755 219 YESGLGVKSISWSPC---GQFLAVGSYD-----QTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELC 290 (419)
Q Consensus 219 ~~~~~~v~~~~~s~~---~~~l~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (419)
..+.....|+.|+|. ..+||.|+.+ +.++||.......
T Consensus 166 ~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~r---------------------------------- 211 (361)
T KOG2445|consen 166 GKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGR---------------------------------- 211 (361)
T ss_pred ccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcc----------------------------------
Confidence 112236789999974 3678888865 4677877543210
Q ss_pred ccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccC----CeEEEEecCCCCceEEEeeccC
Q 014755 291 LNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSD----SQYICTRNDSMPTTLWIWDICR 366 (419)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~----g~~l~~~~~d~~~~i~iwd~~~ 366 (419)
.+....++++|..+|++++|.|+ -..||+++.| | |+||.+..
T Consensus 212 -------------------------------Kw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kD--g-v~I~~v~~ 257 (361)
T KOG2445|consen 212 -------------------------------KWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKD--G-VRIFKVKV 257 (361)
T ss_pred -------------------------------eeeeehhcCCCCCcceeeeeccccCCceeeEEEeecC--c-EEEEEEee
Confidence 01111224468999999999996 3578999998 8 99999873
Q ss_pred C--------------------Cceeec-ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 367 Q--------------------EPAAIL-VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 367 ~--------------------~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
. +.+..+ +|.++|+.+.|+-.|..|++.|+||+|++|...
T Consensus 258 ~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkan 318 (361)
T KOG2445|consen 258 ARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKAN 318 (361)
T ss_pred ccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhh
Confidence 1 012222 599999999999999999999999999999865
No 154
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.91 E-value=7.7e-21 Score=164.79 Aligned_cols=279 Identities=11% Similarity=0.152 Sum_probs=185.0
Q ss_pred eEEEEeccCCeEEEEEccC-Cc--ceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcC-CCeEEE--eccCCCC
Q 014755 61 YILCGLYKRLMIQAWSLTQ-PE--WTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLL-NTACVH--VQSPKHA 134 (419)
Q Consensus 61 ~l~~~~~~~g~i~iw~~~~-~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~-~~~~~~--~~~~~~~ 134 (419)
+++++...++.|++|++.+ ++ .+..+. .......++++|++++|++++...+.|.+|++. +++... .......
T Consensus 3 ~~y~~~~~~~~I~~~~~~~~g~l~~~~~~~-~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~~~~~ 81 (330)
T PRK11028 3 IVYIASPESQQIHVWNLNHEGALTLLQVVD-VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESPLPGS 81 (330)
T ss_pred EEEEEcCCCCCEEEEEECCCCceeeeeEEe-cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeecCCCC
Confidence 4455544458999999964 33 333332 345677899999999998886655589999997 344322 1222335
Q ss_pred eeeEEEccCCCEEEEEeecCCCCeEEEEeccC-Ce---EEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-C
Q 014755 135 SKGVAFTQDGKFAAICTRRDCKDYINLLSCHT-WE---IMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-D 209 (419)
Q Consensus 135 ~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~-~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~ 209 (419)
...++++|++++++++... .+.|.+|++++ +. .+..+. +......++++|+++++++.+ ..++.|.+||+ +
T Consensus 82 p~~i~~~~~g~~l~v~~~~--~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~-~~~~~v~v~d~~~ 157 (330)
T PRK11028 82 PTHISTDHQGRFLFSASYN--ANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPC-LKEDRIRLFTLSD 157 (330)
T ss_pred ceEEEECCCCCEEEEEEcC--CCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEee-CCCCEEEEEEECC
Confidence 6789999999999998764 37999999974 22 222222 224467789999999998754 44689999999 3
Q ss_pred CceEE-----EEeecCCCCceeEEEEccCCCeEEEEEe-cCcEEEEEcCC--cee--eeeec-ccccccCCCccceeccC
Q 014755 210 GRCLL-----KYQAYESGLGVKSISWSPCGQFLAVGSY-DQTLRVLNHLT--WKT--FAEFM-HLSTVRGPCFPAVFKEV 278 (419)
Q Consensus 210 ~~~~~-----~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d~~i~v~d~~~--~~~--~~~~~-~~~~~~~~~~~~~~~~~ 278 (419)
...+. ...... ......++|+|+|+++++... +++|.+|++.. ++. +..+. .+...
T Consensus 158 ~g~l~~~~~~~~~~~~-g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~------------ 224 (330)
T PRK11028 158 DGHLVAQEPAEVTTVE-GAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADF------------ 224 (330)
T ss_pred CCcccccCCCceecCC-CCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcC------------
Confidence 22221 111111 125778999999999988876 88999999873 221 11111 00000
Q ss_pred CCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCce
Q 014755 279 DEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTT 358 (419)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~ 358 (419)
.+......+.++|+|++++++... ++.
T Consensus 225 ----------------------------------------------------~~~~~~~~i~~~pdg~~lyv~~~~-~~~ 251 (330)
T PRK11028 225 ----------------------------------------------------SDTRWAADIHITPDGRHLYACDRT-ASL 251 (330)
T ss_pred ----------------------------------------------------CCCccceeEEECCCCCEEEEecCC-CCe
Confidence 011123468999999999998652 389
Q ss_pred EEEeeccCCC-ceeeccc---CCCeeEEEeCCCCCeEEEEeC-CCcEEEeecC--CCeE
Q 014755 359 LWIWDICRQE-PAAILVQ---KDPIRAATWDPTCTRLVLCTG-SSHLYMWTPS--GAYC 410 (419)
Q Consensus 359 i~iwd~~~~~-~~~~~~~---~~~v~~~~~s~~~~~l~s~~~-dg~i~vw~~~--~~~~ 410 (419)
|.+|+++... .....++ ....+.+.++|||++|+++.. +++|.+|+++ ++.+
T Consensus 252 I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~~~g~l 310 (330)
T PRK11028 252 ISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYEIDGETGLL 310 (330)
T ss_pred EEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEccCCcEEEEEEcCCCCcE
Confidence 9999996543 2333332 235678999999999987765 8999999875 4444
No 155
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.91 E-value=7e-22 Score=154.49 Aligned_cols=285 Identities=14% Similarity=0.236 Sum_probs=193.8
Q ss_pred ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC----cceeeeecCCccEeEEEECC--CCCEEEEEecCCCeEEEE
Q 014755 45 SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP----EWTCKIDEGLAGIAYARWSP--DSRHILTTSDFQLRLTVW 118 (419)
Q Consensus 45 ~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~~i~iw 118 (419)
+|.+-|+++.|.+.|+.+|+++.| ++|+|||.++. .+....+.|.+.|..+.|.+ =|+.+++++.|+ ++.||
T Consensus 11 ~h~DlihdVs~D~~GRRmAtCSsD-q~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Dr-tv~iW 88 (361)
T KOG2445|consen 11 GHKDLIHDVSFDFYGRRMATCSSD-QTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDR-TVSIW 88 (361)
T ss_pred CCcceeeeeeecccCceeeeccCC-CcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCC-ceeee
Confidence 488899999999999999999988 79999997544 23445678999999999976 589999999998 99999
Q ss_pred EcCC-------CeEEE---eccCCCCeeeEEEccC--CCEEEEEeecCCCCeEEEEeccC------CeEEEEEe------
Q 014755 119 SLLN-------TACVH---VQSPKHASKGVAFTQD--GKFAAICTRRDCKDYINLLSCHT------WEIMGVFA------ 174 (419)
Q Consensus 119 d~~~-------~~~~~---~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~g~v~i~d~~~------~~~~~~~~------ 174 (419)
.-.. .+.++ +......|+.+.|.|. |-.+++++.| |.++||+.-. +.+...+.
T Consensus 89 EE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aD---G~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp 165 (361)
T KOG2445|consen 89 EEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASAD---GILRIYEAPDPMNLSQWTLQHEIQNVIDPP 165 (361)
T ss_pred eecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccC---cEEEEEecCCccccccchhhhhhhhccCCc
Confidence 7521 12222 5667778999999986 5678888887 8999997644 33333333
Q ss_pred -ccccceeeeeECCC---CCeEEEEcCC---CCceEEEEcC--CC-ceEEEEeecCCCCceeEEEEccCC----CeEEEE
Q 014755 175 -VDTLDLADIEWSPD---DSAIVIWDSP---LEYKVLIYSP--DG-RCLLKYQAYESGLGVKSISWSPCG----QFLAVG 240 (419)
Q Consensus 175 -~~~~~v~~~~~~~~---~~~l~~~~~~---~~~~i~~~d~--~~-~~~~~~~~~~~~~~v~~~~~s~~~----~~l~~~ 240 (419)
.+..+..|+.|+|. ...|++.... .-+.+++|.. .+ +..+.-....+..+|+.++|.|+- ..||++
T Consensus 166 ~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA 245 (361)
T KOG2445|consen 166 GKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVA 245 (361)
T ss_pred ccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEe
Confidence 24456789999975 3466662211 1147788776 44 222222223444599999999963 579999
Q ss_pred EecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCC
Q 014755 241 SYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISL 320 (419)
Q Consensus 241 ~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (419)
+.|| |+||.+..... .+. ...+..+.....
T Consensus 246 ~kDg-v~I~~v~~~~s--~i~-~ee~~~~~~~~~---------------------------------------------- 275 (361)
T KOG2445|consen 246 TKDG-VRIFKVKVARS--AIE-EEEVLAPDLMTD---------------------------------------------- 275 (361)
T ss_pred ecCc-EEEEEEeeccc--hhh-hhcccCCCCccc----------------------------------------------
Confidence 9999 99999864221 000 001100000000
Q ss_pred CCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCC---CceeecccCCCeeEEEeCC
Q 014755 321 PFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQ---EPAAILVQKDPIRAATWDP 386 (419)
Q Consensus 321 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~---~~~~~~~~~~~v~~~~~s~ 386 (419)
...+....+.+|.+.|..+.|.--|..|++.+.| |.|++|...-. ++...+...+.+....|++
T Consensus 276 l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdD--G~VRLWkany~n~~kC~sv~~~e~~~~~~~~~~ 342 (361)
T KOG2445|consen 276 LPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDD--GCVRLWKANYNNLWKCTSVLKAEGSVTKPDFSQ 342 (361)
T ss_pred cceEEeeeccCCCCceEEEEEeeeeeEEeecCCC--ceeeehhhhhhhhheeeeEEeccCCCCCccccc
Confidence 0111222355799999999999999999999999 99999976532 3444444455555555543
No 156
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.91 E-value=1.2e-22 Score=168.72 Aligned_cols=267 Identities=10% Similarity=0.106 Sum_probs=201.2
Q ss_pred eEEEEeccCCeEEEEEccCCcceeeeecCC--ccEeEEEECCCCCEEEEE--ecCCCeEEEEEcCCC--eEEEe-ccCCC
Q 014755 61 YILCGLYKRLMIQAWSLTQPEWTCKIDEGL--AGIAYARWSPDSRHILTT--SDFQLRLTVWSLLNT--ACVHV-QSPKH 133 (419)
Q Consensus 61 ~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~--~~~~~~i~iwd~~~~--~~~~~-~~~~~ 133 (419)
+.++.+.| .+++||....+....+..+. ..+.++.|+.... |+++ +.|. .+++|.-... +...+ .....
T Consensus 5 l~~aS~gd--~~kl~D~s~~~~~~~~~~~t~~pg~~s~~w~~~n~-lvvas~~gdk-~~~~~~K~g~~~~Vp~~~k~~gd 80 (673)
T KOG4378|consen 5 LHVASTGD--KTKLSDFSDLETKSEYVHQTAEPGDFSFNWQRRNF-LVVASMAGDK-VMRIKEKDGKTPEVPRVRKLTGD 80 (673)
T ss_pred eeeeccCC--ceEEeecccccCccccccCCCCCcceeeeccccce-EEEeecCCce-eEEEecccCCCCccceeeccccc
Confidence 33444434 69999998765544444443 2388999987665 4444 3455 7888865443 23322 22222
Q ss_pred CeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCce
Q 014755 134 ASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRC 212 (419)
Q Consensus 134 ~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~ 212 (419)
...|++......++++++.. +.|+|||++...+.+.++.|...|+++.++-...+|+. .+..|.|.+..+ ++..
T Consensus 81 ~~~Cv~~~s~S~y~~sgG~~---~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAs--vs~gGdiiih~~~t~~~ 155 (673)
T KOG4378|consen 81 NAFCVACASQSLYEISGGQS---GCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIAS--VSDGGDIIIHGTKTKQK 155 (673)
T ss_pred hHHHHhhhhcceeeeccCcC---ceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEE--eccCCcEEEEecccCcc
Confidence 34666666666899998876 89999999977778889999999999999999999998 666789999998 5555
Q ss_pred EEEEeecCCCCceeEEEEccCCCe-EEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeec
Q 014755 213 LLKYQAYESGLGVKSISWSPCGQF-LAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCL 291 (419)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (419)
...+... ....|.-+.|+|..++ |.+++.+|.|.+||+....+...+.
T Consensus 156 tt~f~~~-sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~------------------------------ 204 (673)
T KOG4378|consen 156 TTTFTID-SGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHAS------------------------------ 204 (673)
T ss_pred ccceecC-CCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchh------------------------------
Confidence 5555433 2336788999998764 5667889999999998766554432
Q ss_pred cCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCC-eEEEEecCCCCceEEEeeccCCCce
Q 014755 292 NDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDS-QYICTRNDSMPTTLWIWDICRQEPA 370 (419)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~d~~~~i~iwd~~~~~~~ 370 (419)
..|..+...++|||.. .+|++.+.| ..|.+||....+..
T Consensus 205 --------------------------------------~~HsAP~~gicfspsne~l~vsVG~D--kki~~yD~~s~~s~ 244 (673)
T KOG4378|consen 205 --------------------------------------EAHSAPCRGICFSPSNEALLVSVGYD--KKINIYDIRSQAST 244 (673)
T ss_pred --------------------------------------hhccCCcCcceecCCccceEEEeccc--ceEEEeeccccccc
Confidence 1377777889999965 567788888 99999999988888
Q ss_pred eecccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCC
Q 014755 371 AILVQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSG 407 (419)
Q Consensus 371 ~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 407 (419)
..+....+.+.++|+++|.+|+.|...|.|..||+..
T Consensus 245 ~~l~y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~ 281 (673)
T KOG4378|consen 245 DRLTYSHPLSTVAFSECGTYLCAGNSKGELIAYDMRS 281 (673)
T ss_pred ceeeecCCcceeeecCCceEEEeecCCceEEEEeccc
Confidence 7777888999999999999999999999999999984
No 157
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.91 E-value=1.6e-22 Score=166.20 Aligned_cols=261 Identities=14% Similarity=0.193 Sum_probs=194.8
Q ss_pred EccCCcceeeeecCCccEeEEEECCCCC-EEEEEecCCCeEEEEEcCCCe-----EEEeccCCCCeeeEEEccCC-CEEE
Q 014755 76 SLTQPEWTCKIDEGLAGIAYARWSPDSR-HILTTSDFQLRLTVWSLLNTA-----CVHVQSPKHASKGVAFTQDG-KFAA 148 (419)
Q Consensus 76 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~~i~iwd~~~~~-----~~~~~~~~~~~~~~~~~~~~-~~l~ 148 (419)
|+.+-.....+..+..+|++++|+|... .++.+|...|+|-+||+.+.+ ...+..|..+|.++.|+|.+ ..++
T Consensus 172 ~l~~~~~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ 251 (498)
T KOG4328|consen 172 DLDDYRILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIY 251 (498)
T ss_pred ccccceecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhhee
Confidence 3333344445666888999999999765 666666666799999996322 22377888899999999976 6788
Q ss_pred EEeecCCCCeEEEEeccCCeEEEEEe--ccccceeeeeECCCCCeEEEEcCCCCceEEEEcC--CCceEEEEeecCCCCc
Q 014755 149 ICTRRDCKDYINLLSCHTWEIMGVFA--VDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP--DGRCLLKYQAYESGLG 224 (419)
Q Consensus 149 ~~~~~~~~g~v~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~--~~~~~~~~~~~~~~~~ 224 (419)
+.+.| |+|++-|++.......+. .....+..+.|+.+...+++ +..=|...+||+ .+.....+..|.. .
T Consensus 252 ssSyD---GtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~--~~~~G~f~~iD~R~~~s~~~~~~lh~k--K 324 (498)
T KOG4328|consen 252 SSSYD---GTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLF--GDNVGNFNVIDLRTDGSEYENLRLHKK--K 324 (498)
T ss_pred eeccC---ceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEE--eecccceEEEEeecCCccchhhhhhhc--c
Confidence 88887 999999998754333333 34566788888888777777 333468899998 5555666666666 8
Q ss_pred eeEEEEccCC-CeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCcccccccccc
Q 014755 225 VKSISWSPCG-QFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDAT 303 (419)
Q Consensus 225 v~~~~~s~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (419)
|.+++++|.. .+||+++.|++.+|||++.-.....
T Consensus 325 I~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~s-------------------------------------------- 360 (498)
T KOG4328|consen 325 ITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKAS-------------------------------------------- 360 (498)
T ss_pred cceeecCCCCchheeecccCcceeeeehhhhcCCCC--------------------------------------------
Confidence 9999999965 5899999999999999875332211
Q ss_pred CCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeecc----CCCceeecccCC--
Q 014755 304 NGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDIC----RQEPAAILVQKD-- 377 (419)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~----~~~~~~~~~~~~-- 377 (419)
|....-.|...|.++.|||.+-.|++.+.| ..|+|||.. .-++...+.|..
T Consensus 361 ---------------------p~lst~~HrrsV~sAyFSPs~gtl~TT~~D--~~IRv~dss~~sa~~~p~~~I~Hn~~t 417 (498)
T KOG4328|consen 361 ---------------------PFLSTLPHRRSVNSAYFSPSGGTLLTTCQD--NEIRVFDSSCISAKDEPLGTIPHNNRT 417 (498)
T ss_pred ---------------------cceecccccceeeeeEEcCCCCceEeeccC--CceEEeecccccccCCccceeeccCcc
Confidence 000112488889999999998889999999 999999983 344555554443
Q ss_pred --C--eeEEEeCCCCCeEEEEeCCCcEEEeecCCCeE
Q 014755 378 --P--IRAATWDPTCTRLVLCTGSSHLYMWTPSGAYC 410 (419)
Q Consensus 378 --~--v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~ 410 (419)
. .....|.|+..+++++-.-..|-|+|-+++++
T Consensus 418 ~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~ 454 (498)
T KOG4328|consen 418 GRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQM 454 (498)
T ss_pred cccccchhheeCCCccEEEEeccCcceeEEcCCCCEE
Confidence 2 34678999999999999999999999998884
No 158
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.91 E-value=1.2e-21 Score=152.44 Aligned_cols=217 Identities=16% Similarity=0.236 Sum_probs=168.1
Q ss_pred eecCCccEeEEEECC-CCCEEEEEecCCCeEEEEEcCCCe------------EEE----eccCCCCeeeEEEccCC-CEE
Q 014755 86 IDEGLAGIAYARWSP-DSRHILTTSDFQLRLTVWSLLNTA------------CVH----VQSPKHASKGVAFTQDG-KFA 147 (419)
Q Consensus 86 ~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~i~iwd~~~~~------------~~~----~~~~~~~~~~~~~~~~~-~~l 147 (419)
...|.+.|..+...+ .|+++++++.|+ .|.+||++... ++. ...|+..|..+.|-|-. ..+
T Consensus 39 ~r~HgGsvNsL~id~tegrymlSGgadg-si~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmF 117 (397)
T KOG4283|consen 39 VRPHGGSVNSLQIDLTEGRYMLSGGADG-SIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMF 117 (397)
T ss_pred eccCCCccceeeeccccceEEeecCCCc-cEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCcee
Confidence 345778899998877 789999999988 99999998632 110 23566678888998855 566
Q ss_pred EEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCC---eEEEEcCCCCceEEEEcC-CCceEEEEeecCCCC
Q 014755 148 AICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDS---AIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGL 223 (419)
Q Consensus 148 ~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~---~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~ 223 (419)
.+++.| .++++||.++-+....++. ++.|++-+++|-.. ++++ +..+-+|++-|+ +|..-+.+.+|..
T Consensus 118 tssSFD---htlKVWDtnTlQ~a~~F~m-e~~VYshamSp~a~sHcLiA~--gtr~~~VrLCDi~SGs~sH~LsGHr~-- 189 (397)
T KOG4283|consen 118 TSSSFD---HTLKVWDTNTLQEAVDFKM-EGKVYSHAMSPMAMSHCLIAA--GTRDVQVRLCDIASGSFSHTLSGHRD-- 189 (397)
T ss_pred eccccc---ceEEEeecccceeeEEeec-CceeehhhcChhhhcceEEEE--ecCCCcEEEEeccCCcceeeeccccC--
Confidence 666666 7999999999888877765 46788888888643 4444 777899999999 9999999999887
Q ss_pred ceeEEEEccCCCe-EEEEEecCcEEEEEcCCc-eeeeeecccccccCCCccceeccCCCcccccceeeeccCcccccccc
Q 014755 224 GVKSISWSPCGQF-LAVGSYDQTLRVLNHLTW-KTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSD 301 (419)
Q Consensus 224 ~v~~~~~s~~~~~-l~~~~~d~~i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (419)
.|.++.|+|...+ |++|+.||.|++||++.. .++..+......+.
T Consensus 190 ~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~--------------------------------- 236 (397)
T KOG4283|consen 190 GVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRP--------------------------------- 236 (397)
T ss_pred ceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccC---------------------------------
Confidence 8999999998775 678999999999999865 45555541111110
Q ss_pred ccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCC
Q 014755 302 ATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQE 368 (419)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~ 368 (419)
+....-+.|.+.|..++|+.||+++++.+.| ..+++|+..+|+
T Consensus 237 ----------------------p~~~~n~ah~gkvngla~tSd~~~l~~~gtd--~r~r~wn~~~G~ 279 (397)
T KOG4283|consen 237 ----------------------PILKTNTAHYGKVNGLAWTSDARYLASCGTD--DRIRVWNMESGR 279 (397)
T ss_pred ----------------------ccccccccccceeeeeeecccchhhhhccCc--cceEEeecccCc
Confidence 0111234688999999999999999999998 999999998875
No 159
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.91 E-value=5e-22 Score=160.97 Aligned_cols=280 Identities=15% Similarity=0.177 Sum_probs=196.5
Q ss_pred eEEcCCCC-EEEEEe-CCeEEEEecCCCc------EEE----EeecCcceeEEEEecCCCeEEEEeccCCeEEEEEcc--
Q 014755 13 SCFSPNAR-YIAVAV-DYRLVVRDAHSFK------VVQ----LFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLT-- 78 (419)
Q Consensus 13 ~~~s~d~~-~la~~~-~~~i~i~~~~~~~------~~~----~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~-- 78 (419)
+.|.++.. .||+|+ |..|+||.+..++ .+. +-.|...|+++.|+|+|..||+|+. +|.|.+|...
T Consensus 19 ~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D-~g~v~lWk~~~~ 97 (434)
T KOG1009|consen 19 VDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGD-GGEVFLWKQGDV 97 (434)
T ss_pred EEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCC-CceEEEEEecCc
Confidence 66777766 899997 8889999775322 222 2348999999999999999999985 4999999876
Q ss_pred ------C-----C---cceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccC
Q 014755 79 ------Q-----P---EWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQD 143 (419)
Q Consensus 79 ------~-----~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~ 143 (419)
+ . .....+.+|...|..++|+|++.++++++.+. .+++||+..|+... +..|...+..++|.|-
T Consensus 98 ~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dn-s~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl 176 (434)
T KOG1009|consen 98 RIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDN-SVRLWDVHAGQLLAILDDHEHYVQGVAWDPL 176 (434)
T ss_pred CCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccc-eEEEEEeccceeEeeccccccccceeecchh
Confidence 2 1 12334667889999999999999999999998 99999999999988 8889999999999999
Q ss_pred CCEEEEEeecCCCCeEEEEeccCCeEEEEEe-------------------ccc----cceeeeeECCCCCeEEEEcCCC-
Q 014755 144 GKFAAICTRRDCKDYINLLSCHTWEIMGVFA-------------------VDT----LDLADIEWSPDDSAIVIWDSPL- 199 (419)
Q Consensus 144 ~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~-------------------~~~----~~v~~~~~~~~~~~l~~~~~~~- 199 (419)
++++++-+.| ...+.+.+...+.+.... .|+ .-...++|+|+|.++++-++..
T Consensus 177 ~qyv~s~s~d---r~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvtPag~~~ 253 (434)
T KOG1009|consen 177 NQYVASKSSD---RHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVTPAGLFK 253 (434)
T ss_pred hhhhhhhccC---cccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEcccceee
Confidence 9999998876 345555443322211111 011 1246788999999988632211
Q ss_pred ------CceEEEEcC--CCceEEEEeecCCCCceeEEEEcc------------------CCCeEEEEEecCcEEEEEcCC
Q 014755 200 ------EYKVLIYSP--DGRCLLKYQAYESGLGVKSISWSP------------------CGQFLAVGSYDQTLRVLNHLT 253 (419)
Q Consensus 200 ------~~~i~~~d~--~~~~~~~~~~~~~~~~v~~~~~s~------------------~~~~l~~~~~d~~i~v~d~~~ 253 (419)
-+..++|+. ..++...+..... +...+.++| .+..+|.++. +.|++||.++
T Consensus 254 ~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k--~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt~-~svyvydtq~ 330 (434)
T KOG1009|consen 254 VGGGVFRNTSYVFSRKDLKRPAARLPSPKK--PALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIATK-NSVYVYDTQT 330 (434)
T ss_pred eCCceeeceeEeeccccccCceeecCCCCc--ceEEEEeeeeEEEeccccccccccccccceEEEEeec-ceEEEecccc
Confidence 133455554 2233333333322 344444443 2223444554 5899999877
Q ss_pred ceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCC
Q 014755 254 WKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPK 333 (419)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (419)
-.++..... -|-
T Consensus 331 ~~P~~~v~n--------------------------------------------------------------------ihy 342 (434)
T KOG1009|consen 331 LEPLAVVDN--------------------------------------------------------------------IHY 342 (434)
T ss_pred ccceEEEee--------------------------------------------------------------------eee
Confidence 666554421 155
Q ss_pred cceEEEEEccCCeEEEEecCCCCceEEEeeccCCCce
Q 014755 334 QGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPA 370 (419)
Q Consensus 334 ~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~ 370 (419)
..|++++|++||.+|+..+.| |...+-..+..++-
T Consensus 343 ~~iTDiaws~dg~~l~vSS~D--GyCS~vtfe~~elg 377 (434)
T KOG1009|consen 343 SAITDIAWSDDGSVLLVSSTD--GFCSLVTFEPWELG 377 (434)
T ss_pred eeecceeecCCCcEEEEeccC--CceEEEEEcchhcc
Confidence 568999999999999999999 98888777776554
No 160
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.90 E-value=2.7e-20 Score=161.38 Aligned_cols=225 Identities=10% Similarity=0.082 Sum_probs=155.3
Q ss_pred eCCeEEEEecCC-Cc--EEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEcc-CCcc--eeeeecCCccEeEEEEC
Q 014755 26 VDYRLVVRDAHS-FK--VVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLT-QPEW--TCKIDEGLAGIAYARWS 99 (419)
Q Consensus 26 ~~~~i~i~~~~~-~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~-~~~~--~~~~~~~~~~v~~~~~~ 99 (419)
.++.|.+|++.+ ++ .++.+.+.+....++++|++++|++++..++.|.+|+++ +++. .... ........++|+
T Consensus 10 ~~~~I~~~~~~~~g~l~~~~~~~~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~-~~~~~p~~i~~~ 88 (330)
T PRK11028 10 ESQQIHVWNLNHEGALTLLQVVDVPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAES-PLPGSPTHISTD 88 (330)
T ss_pred CCCCEEEEEECCCCceeeeeEEecCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeee-cCCCCceEEEEC
Confidence 378899999964 43 445555667788999999999998887666899999997 3332 1122 223356789999
Q ss_pred CCCCEEEEEecCCCeEEEEEcCC-Ce---EEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEE---
Q 014755 100 PDSRHILTTSDFQLRLTVWSLLN-TA---CVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGV--- 172 (419)
Q Consensus 100 ~~~~~l~~~~~~~~~i~iwd~~~-~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~--- 172 (419)
|+++++++++...+.|.+|++.. +. .............++++|++++++++... .+.|.+||+++...+..
T Consensus 89 ~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~--~~~v~v~d~~~~g~l~~~~~ 166 (330)
T PRK11028 89 HQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLK--EDRIRLFTLSDDGHLVAQEP 166 (330)
T ss_pred CCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCC--CCEEEEEEECCCCcccccCC
Confidence 99999999986566999999974 32 22222223345788999999999877654 37999999976322211
Q ss_pred --Ee-ccccceeeeeECCCCCeEEEEcCCCCceEEEEcCC---Cce--EEEEeecC----CCCceeEEEEccCCCeEEEE
Q 014755 173 --FA-VDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPD---GRC--LLKYQAYE----SGLGVKSISWSPCGQFLAVG 240 (419)
Q Consensus 173 --~~-~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~---~~~--~~~~~~~~----~~~~v~~~~~s~~~~~l~~~ 240 (419)
.. ........+.|+|+|+++++.+ ..++.|.+|+++ ++. +..+.... +......+.++|++++++++
T Consensus 167 ~~~~~~~g~~p~~~~~~pdg~~lyv~~-~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~ 245 (330)
T PRK11028 167 AEVTTVEGAGPRHMVFHPNQQYAYCVN-ELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYAC 245 (330)
T ss_pred CceecCCCCCCceEEECCCCCEEEEEe-cCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEe
Confidence 11 1124467899999999998854 347999999983 222 22232211 11123468899999999888
Q ss_pred Ee-cCcEEEEEcCCc
Q 014755 241 SY-DQTLRVLNHLTW 254 (419)
Q Consensus 241 ~~-d~~i~v~d~~~~ 254 (419)
.. ++.|.+|++...
T Consensus 246 ~~~~~~I~v~~i~~~ 260 (330)
T PRK11028 246 DRTASLISVFSVSED 260 (330)
T ss_pred cCCCCeEEEEEEeCC
Confidence 54 689999998653
No 161
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.90 E-value=1.3e-19 Score=145.48 Aligned_cols=286 Identities=16% Similarity=0.207 Sum_probs=209.1
Q ss_pred cceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecC-CCeEEEEEcCCCeEE
Q 014755 48 DKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDF-QLRLTVWSLLNTACV 126 (419)
Q Consensus 48 ~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~~~i~iwd~~~~~~~ 126 (419)
..+..+.|..+...|..|+.+ | .++|..+..............|.-+-|+.. .++..+.+ ...+++++.+.+..+
T Consensus 6 ~ti~~~~~Nqd~~~lsvGs~~-G-yk~~~~~~~~k~~~~~~~~~~IvEmLFSSS--LvaiV~~~qpr~Lkv~~~Kk~~~I 81 (391)
T KOG2110|consen 6 PTINFIGFNQDSTLLSVGSKD-G-YKIFSCSPFEKCFSKDTEGVSIVEMLFSSS--LVAIVSIKQPRKLKVVHFKKKTTI 81 (391)
T ss_pred cceeeeeeccceeEEEccCCC-c-eeEEecCchHHhhcccCCCeEEEEeecccc--eeEEEecCCCceEEEEEcccCceE
Confidence 456677799999888888865 3 788888765443222233345667777654 55555533 236999999988887
Q ss_pred EeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEec---cccceeeeeECCCCCeEEEEcCCCCceE
Q 014755 127 HVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAV---DTLDLADIEWSPDDSAIVIWDSPLEYKV 203 (419)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~~~~~~i 203 (419)
.-...+..+.++.++. ++|+++-.+ .|+|||+++.+.+..+.. +...+.++++++.+.+++.-+....|.|
T Consensus 82 Ce~~fpt~IL~VrmNr--~RLvV~Lee----~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV 155 (391)
T KOG2110|consen 82 CEIFFPTSILAVRMNR--KRLVVCLEE----SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDV 155 (391)
T ss_pred EEEecCCceEEEEEcc--ceEEEEEcc----cEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceE
Confidence 7555667788888864 466666653 799999999999887754 3445677777777789998777778999
Q ss_pred EEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCc-EEEEEcCCceeeeeecccccccCCCccceeccCCCc
Q 014755 204 LIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQT-LRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEP 281 (419)
Q Consensus 204 ~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~-i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (419)
.+||. +-+....+..|.. .+.+++|+++|.+||+++..|+ ||||.+.+|+.+.+|....
T Consensus 156 ~l~d~~nl~~v~~I~aH~~--~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~----------------- 216 (391)
T KOG2110|consen 156 VLFDTINLQPVNTINAHKG--PLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGT----------------- 216 (391)
T ss_pred EEEEcccceeeeEEEecCC--ceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCc-----------------
Confidence 99999 7788888888777 8999999999999999999986 7999999999999886211
Q ss_pred ccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEE
Q 014755 282 LQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWI 361 (419)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~i 361 (419)
-...|.+++|+|++++|++.+.. ++|+|
T Consensus 217 --------------------------------------------------~~~~IySL~Fs~ds~~L~~sS~T--eTVHi 244 (391)
T KOG2110|consen 217 --------------------------------------------------YPVSIYSLSFSPDSQFLAASSNT--ETVHI 244 (391)
T ss_pred --------------------------------------------------eeeEEEEEEECCCCCeEEEecCC--CeEEE
Confidence 01138899999999999999998 99999
Q ss_pred eeccCCCce--------------------e--------e-----------cccCCCeeEEEeC--CCCCeEEEEeCCCcE
Q 014755 362 WDICRQEPA--------------------A--------I-----------LVQKDPIRAATWD--PTCTRLVLCTGSSHL 400 (419)
Q Consensus 362 wd~~~~~~~--------------------~--------~-----------~~~~~~v~~~~~s--~~~~~l~s~~~dg~i 400 (419)
|.++....- . . +...+.-..+.+. +....+..++.||.+
T Consensus 245 FKL~~~~~~~~~~p~~~~~~~~~~sk~~~sylps~V~~~~~~~R~FAt~~l~~s~~~~~~~l~~~~~~~~v~vas~dG~~ 324 (391)
T KOG2110|consen 245 FKLEKVSNNPPESPTAGTSWFGKVSKAATSYLPSQVSSVLDQSRKFATAKLPESGRKNICSLSSIQKIPRVLVASYDGHL 324 (391)
T ss_pred EEecccccCCCCCCCCCCcccchhhhhhhhhcchhhhhhhhhccceeEEEccCCCccceEEeeccCCCCEEEEEEcCCeE
Confidence 988642100 0 0 0011111223333 466788889999999
Q ss_pred EEeecC---CCeEEecC
Q 014755 401 YMWTPS---GAYCVSNP 414 (419)
Q Consensus 401 ~vw~~~---~~~~~~~~ 414 (419)
+.|.+. +|++.-+.
T Consensus 325 y~y~l~~~~gGec~lik 341 (391)
T KOG2110|consen 325 YSYRLPPKEGGECALIK 341 (391)
T ss_pred EEEEcCCCCCceeEEEE
Confidence 999886 56665443
No 162
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.90 E-value=7.1e-22 Score=161.83 Aligned_cols=236 Identities=11% Similarity=0.111 Sum_probs=177.4
Q ss_pred CCCEEEEEe-CCeEEEEecCCCc---EEE-------------------EeecCcceeEEEEecCC-CeEEEEeccCCeEE
Q 014755 18 NARYIAVAV-DYRLVVRDAHSFK---VVQ-------------------LFSCLDKISYIEWALDS-EYILCGLYKRLMIQ 73 (419)
Q Consensus 18 d~~~la~~~-~~~i~i~~~~~~~---~~~-------------------~~~~~~~v~~~~~s~~~-~~l~~~~~~~g~i~ 73 (419)
-|+|+|.|. +..|.|||+.-.. +.. ..+|++.|.+++|+..- ..||+|+.| .+|.
T Consensus 191 ~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD-~TV~ 269 (463)
T KOG0270|consen 191 AGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSAD-KTVK 269 (463)
T ss_pred CcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCC-ceEE
Confidence 368999998 8889999975211 111 11488889999998864 466777776 7999
Q ss_pred EEEccCCcceeeeecCCccEeEEEECC-CCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEe
Q 014755 74 AWSLTQPEWTCKIDEGLAGIAYARWSP-DSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICT 151 (419)
Q Consensus 74 iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~ 151 (419)
+||+.++++...+..|...|.++.|+| ....|++|+.|+ ++.+.|.+...... .-...+.|..++|.|.....+.++
T Consensus 270 lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~-~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~~se~~f~~~ 348 (463)
T KOG0270|consen 270 LWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDG-TVALKDCRDPSNSGKEWKFDGEVEKVAWDPHSENSFFVS 348 (463)
T ss_pred EEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccc-eEEeeeccCccccCceEEeccceEEEEecCCCceeEEEe
Confidence 999999999999988999999999999 456778888887 99999999522221 233456789999999886666665
Q ss_pred ecCCCCeEEEEeccC-CeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCC-CCceeEEE
Q 014755 152 RRDCKDYINLLSCHT-WEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYES-GLGVKSIS 229 (419)
Q Consensus 152 ~~~~~g~v~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~v~~~~ 229 (419)
.+ +|+|+-+|+|. ++++.+++.|..+|.++++++.-..+++. ++.++.+++|++.+...+....+.- -+...|++
T Consensus 349 td--dG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t-~s~d~~Vklw~~~~~~~~~v~~~~~~~~rl~c~~ 425 (463)
T KOG0270|consen 349 TD--DGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLST-ASTDKVVKLWKFDVDSPKSVKEHSFKLGRLHCFA 425 (463)
T ss_pred cC--CceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceee-ccccceEEEEeecCCCCcccccccccccceeecc
Confidence 55 38999999998 58999999999999999999987766654 6779999999993322222222111 12466778
Q ss_pred EccCCC-eEEEEEecCcEEEEEcCCceeee
Q 014755 230 WSPCGQ-FLAVGSYDQTLRVLNHLTWKTFA 258 (419)
Q Consensus 230 ~s~~~~-~l~~~~~d~~i~v~d~~~~~~~~ 258 (419)
+.|+-. .++.|+..+.++|||+.+...++
T Consensus 426 ~~~~~a~~la~GG~k~~~~vwd~~~~~~V~ 455 (463)
T KOG0270|consen 426 LDPDVAFTLAFGGEKAVLRVWDIFTNSPVR 455 (463)
T ss_pred cCCCcceEEEecCccceEEEeecccChhHH
Confidence 888654 56777888889999998766543
No 163
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.90 E-value=1e-21 Score=167.93 Aligned_cols=278 Identities=12% Similarity=0.136 Sum_probs=192.4
Q ss_pred eEEcC---CCCEEEEEe-CCeEEEEecCCCcEE-------EEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCc
Q 014755 13 SCFSP---NARYIAVAV-DYRLVVRDAHSFKVV-------QLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPE 81 (419)
Q Consensus 13 ~~~s~---d~~~la~~~-~~~i~i~~~~~~~~~-------~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~ 81 (419)
+.|++ ....||.+. +|.|.++|....... ....|...|..+.|.|....|++++.| .++++||+++.+
T Consensus 55 ~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGD-sT~r~Wdvk~s~ 133 (720)
T KOG0321|consen 55 DSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGD-STIRPWDVKTSR 133 (720)
T ss_pred ccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCC-ceeeeeeeccce
Confidence 35554 234566666 788999998654322 234599999999999966677888877 699999999998
Q ss_pred ceee--eecCCccEeEEEECCCCCEE-EEEecCCCeEEEEEcCCCe--------------------EEE--------ecc
Q 014755 82 WTCK--IDEGLAGIAYARWSPDSRHI-LTTSDFQLRLTVWSLLNTA--------------------CVH--------VQS 130 (419)
Q Consensus 82 ~~~~--~~~~~~~v~~~~~~~~~~~l-~~~~~~~~~i~iwd~~~~~--------------------~~~--------~~~ 130 (419)
+... +.+|...|.+++|.|.++.+ ++|+.|+ .+.|||++-.. +.. -..
T Consensus 134 l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg-~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA 212 (720)
T KOG0321|consen 134 LVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDG-EILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKA 212 (720)
T ss_pred eecceeecccccccchhhhccCCCcceeeccCCC-cEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhcccccccc
Confidence 8776 88999999999999977654 5556666 99999986321 000 011
Q ss_pred CCCCeee---EEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEE--------Eecc---ccceeeeeECCCCCeEEEEc
Q 014755 131 PKHASKG---VAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGV--------FAVD---TLDLADIEWSPDDSAIVIWD 196 (419)
Q Consensus 131 ~~~~~~~---~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~--------~~~~---~~~v~~~~~~~~~~~l~~~~ 196 (419)
+...+.+ +.+..|...||+++.- ++.|++||+++...... +..+ ...+.++.....|.+++.
T Consensus 213 ~s~ti~ssvTvv~fkDe~tlaSaga~--D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~A-- 288 (720)
T KOG0321|consen 213 ASNTIFSSVTVVLFKDESTLASAGAA--DSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFA-- 288 (720)
T ss_pred ccCceeeeeEEEEEeccceeeeccCC--CcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEE--
Confidence 2223333 5566788899998872 48999999987443221 1112 234677777777888887
Q ss_pred CCCCceEEEEcCCC---ceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccc
Q 014755 197 SPLEYKVLIYSPDG---RCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPA 273 (419)
Q Consensus 197 ~~~~~~i~~~d~~~---~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~ 273 (419)
...|+.|+.|++.+ ..+..+.++.....-..-..+|++.++++|+.|...++|.+.+.+.-.
T Consensus 289 sCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~--------------- 353 (720)
T KOG0321|consen 289 SCTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPP--------------- 353 (720)
T ss_pred EecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCCh---------------
Confidence 56699999999933 233333332221112233468999999999999999999987532211
Q ss_pred eeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccC--CeEEEEe
Q 014755 274 VFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSD--SQYICTR 351 (419)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--g~~l~~~ 351 (419)
..+.+|.-.|++++|.|. .. ++++
T Consensus 354 -----------------------------------------------------~~l~Ght~eVt~V~w~pS~~t~-v~Tc 379 (720)
T KOG0321|consen 354 -----------------------------------------------------ALLLGHTREVTTVRWLPSATTP-VATC 379 (720)
T ss_pred -----------------------------------------------------hhhhCcceEEEEEeeccccCCC-ceee
Confidence 113368888999999764 44 5556
Q ss_pred cCCCCceEEEeeccCC
Q 014755 352 NDSMPTTLWIWDICRQ 367 (419)
Q Consensus 352 ~~d~~~~i~iwd~~~~ 367 (419)
++| ..++||++..+
T Consensus 380 SdD--~~~kiW~l~~~ 393 (720)
T KOG0321|consen 380 SDD--FRVKIWRLSNG 393 (720)
T ss_pred ccC--cceEEEeccCc
Confidence 888 99999998653
No 164
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.90 E-value=5.2e-23 Score=187.32 Aligned_cols=286 Identities=12% Similarity=0.165 Sum_probs=211.2
Q ss_pred hcccccCeEEcCCCC-EEEEEe-----------CCeEEEEecC--CCc----EEEEeecCcceeEEEEecCCCe---EEE
Q 014755 6 AYKQTGPSCFSPNAR-YIAVAV-----------DYRLVVRDAH--SFK----VVQLFSCLDKISYIEWALDSEY---ILC 64 (419)
Q Consensus 6 ~~~~~~~~~~s~d~~-~la~~~-----------~~~i~i~~~~--~~~----~~~~~~~~~~v~~~~~s~~~~~---l~~ 64 (419)
.+.....++|||++. ++|+|. +.++.||.+. +.+ .+-.+.-....+.++|.+.|.. |++
T Consensus 5 ~~~Rta~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~~dlk~~~s~~s~~rF~kL~W~~~g~~~~GlIa 84 (1049)
T KOG0307|consen 5 ELSRTATFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDESSDLKPVGSLQSSNRFNKLAWGSYGSHSHGLIA 84 (1049)
T ss_pred cccccceEEecCCCchhhHHHhhhhccccccccccccceeeecccCccccccccccccccccceeeeecccCCCccceee
Confidence 345556689999997 666552 2335565443 222 3333445667899999998877 455
Q ss_pred EeccCCeEEEEEccC---C---cceeeeecCCccEeEEEECCCCC-EEEEEecCCCeEEEEEcCCCeEEE-e--ccCCCC
Q 014755 65 GLYKRLMIQAWSLTQ---P---EWTCKIDEGLAGIAYARWSPDSR-HILTTSDFQLRLTVWSLLNTACVH-V--QSPKHA 134 (419)
Q Consensus 65 ~~~~~g~i~iw~~~~---~---~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~~i~iwd~~~~~~~~-~--~~~~~~ 134 (419)
|+.+||.|.+||... + ..+.+...|.+.|..+.|++... .|++|+.++ .|.|||+..-+... . ......
T Consensus 85 GG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~g-eI~iWDlnn~~tP~~~~~~~~~~e 163 (1049)
T KOG0307|consen 85 GGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDG-EILIWDLNKPETPFTPGSQAPPSE 163 (1049)
T ss_pred ccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCC-cEEEeccCCcCCCCCCCCCCCccc
Confidence 555679999999865 2 34556778999999999999766 667776666 99999998743332 1 224567
Q ss_pred eeeEEEccCCC-EEEEEeecCCCCeEEEEeccCCeEEEEEecccc--ceeeeeECCCCCeEEEEcCCC--CceEEEEcC-
Q 014755 135 SKGVAFTQDGK-FAAICTRRDCKDYINLLSCHTWEIMGVFAVDTL--DLADIEWSPDDSAIVIWDSPL--EYKVLIYSP- 208 (419)
Q Consensus 135 ~~~~~~~~~~~-~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~~~--~~~i~~~d~- 208 (419)
|.+++|+..-. .|++++.+ |.+.|||++..+.+-.+..+.. .+..++|+|+...-++..... .-.|.+||+
T Consensus 164 I~~lsWNrkvqhILAS~s~s---g~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR 240 (1049)
T KOG0307|consen 164 IKCLSWNRKVSHILASGSPS---GRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLR 240 (1049)
T ss_pred ceEeccchhhhHHhhccCCC---CCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeeccc
Confidence 89999988764 45556554 7999999999887777665543 477899999986433321222 357999998
Q ss_pred -CCceEEEEeecCCCCceeEEEEccCC-CeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccc
Q 014755 209 -DGRCLLKYQAYESGLGVKSISWSPCG-QFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDM 286 (419)
Q Consensus 209 -~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (419)
....++.++.|.. .|.++.|++.+ .++++++.|+.|.+|+.++++.+..+.
T Consensus 241 ~assP~k~~~~H~~--GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p------------------------- 293 (1049)
T KOG0307|consen 241 FASSPLKILEGHQR--GILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELP------------------------- 293 (1049)
T ss_pred ccCCchhhhccccc--ceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecC-------------------------
Confidence 5667778877776 89999999966 899999999999999999999888764
Q ss_pred eeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCe-EEEEecCCCCceEEEeecc
Q 014755 287 SELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQ-YICTRNDSMPTTLWIWDIC 365 (419)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~d~~~~i~iwd~~ 365 (419)
....++..+.|+|... .+++++-| |.|.||.+.
T Consensus 294 --------------------------------------------~~~nW~fdv~w~pr~P~~~A~asfd--gkI~I~sl~ 327 (1049)
T KOG0307|consen 294 --------------------------------------------AQGNWCFDVQWCPRNPSVMAAASFD--GKISIYSLQ 327 (1049)
T ss_pred --------------------------------------------CCCcceeeeeecCCCcchhhhheec--cceeeeeee
Confidence 2345688899999766 77778878 999999987
Q ss_pred CCC
Q 014755 366 RQE 368 (419)
Q Consensus 366 ~~~ 368 (419)
+..
T Consensus 328 ~~~ 330 (1049)
T KOG0307|consen 328 GTD 330 (1049)
T ss_pred cCC
Confidence 654
No 165
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.89 E-value=1.1e-18 Score=158.51 Aligned_cols=321 Identities=17% Similarity=0.297 Sum_probs=239.8
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCCCc-EEEEee-cC-cceeEEEE-ecCCC-eEEEEeccCCeEEEEEccC-Ccceee
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHSFK-VVQLFS-CL-DKISYIEW-ALDSE-YILCGLYKRLMIQAWSLTQ-PEWTCK 85 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~~~-~~~~~~-~~-~~v~~~~~-s~~~~-~l~~~~~~~g~i~iw~~~~-~~~~~~ 85 (419)
+.+.+++..++.++ ++.+.+|+..... ....+. +. ..+..+.+ ++++. .++..+..++.+.+|+... ......
T Consensus 71 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 150 (466)
T COG2319 71 IAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRT 150 (466)
T ss_pred EEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEEEecCCCeEEEE
Confidence 77999999999887 8899999998886 444333 23 36777777 88888 4444444358999999988 677778
Q ss_pred eecCCccEeEEEECCCCCEEEEEec-CCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEE-eecCCCCeEEEE
Q 014755 86 IDEGLAGIAYARWSPDSRHILTTSD-FQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAIC-TRRDCKDYINLL 162 (419)
Q Consensus 86 ~~~~~~~v~~~~~~~~~~~l~~~~~-~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~g~v~i~ 162 (419)
+..|...|..+.|+|+++.+++++. ++ .+++|++..+.... +..|...+.+++|+|++..++.+ +.+ +.+++|
T Consensus 151 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d---~~i~~w 226 (466)
T COG2319 151 LEGHSESVTSLAFSPDGKLLASGSSLDG-TIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSD---GTIRLW 226 (466)
T ss_pred EecCcccEEEEEECCCCCEEEecCCCCC-ceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCC---CcEEEE
Confidence 8899999999999999998888875 66 99999999866666 66788999999999999844444 554 789999
Q ss_pred eccCCeEEE-EEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCce-EEEEeecCCCCceeEEEEccCCCeEEE
Q 014755 163 SCHTWEIMG-VFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRC-LLKYQAYESGLGVKSISWSPCGQFLAV 239 (419)
Q Consensus 163 d~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~ 239 (419)
|...+.... .+..|.... ...|+|++..++. ...++.+++|+. .... +..+..+ ...+.++.|+|++..+++
T Consensus 227 d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~ 301 (466)
T COG2319 227 DLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLAS--GSSDGTIRLWDLRSSSSLLRTLSGH--SSSVLSVAFSPDGKLLAS 301 (466)
T ss_pred ECCCCcEEeeecCCCCcce-eEeECCCCCEEEE--ecCCCcEEEeeecCCCcEEEEEecC--CccEEEEEECCCCCEEEE
Confidence 988777777 577776664 3389999977775 677999999999 3332 4444333 348999999998888888
Q ss_pred EEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCC
Q 014755 240 GSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPIS 319 (419)
Q Consensus 240 ~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (419)
++.|+.+++|+..+........
T Consensus 302 ~~~d~~~~~~~~~~~~~~~~~~---------------------------------------------------------- 323 (466)
T COG2319 302 GSSDGTVRLWDLETGKLLSSLT---------------------------------------------------------- 323 (466)
T ss_pred eeCCCcEEEEEcCCCceEEEee----------------------------------------------------------
Confidence 8888889999887765544332
Q ss_pred CCCCCCCCCCCCCCcceEEEEEccCCeEEEEe-cCCCCceEEEeeccCCCceeecccCCCeeEEEeCCCCCeEEE-EeCC
Q 014755 320 LPFQKPPTDKPNPKQGIGLMSWSSDSQYICTR-NDSMPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCTRLVL-CTGS 397 (419)
Q Consensus 320 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~-~~d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s-~~~d 397 (419)
...|...+..+.|++++..++.+ ..| +.+.+|++..............+..+.+++ ...++. +..+
T Consensus 324 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~d--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 391 (466)
T COG2319 324 ---------LKGHEGPVSSLSFSPDGSLLVSGGSDD--GTIRLWDLRTGKPLKTLEGHSNVLSVSFSP-DGRVVSSGSTD 391 (466)
T ss_pred ---------ecccCCceEEEEECCCCCEEEEeecCC--CcEEeeecCCCceeEEecCCceEEEEEECC-CCCEEEEecCC
Confidence 00244457888884343455555 566 899999998887333223333388999998 544444 6889
Q ss_pred CcEEEeecCCCeEEe
Q 014755 398 SHLYMWTPSGAYCVS 412 (419)
Q Consensus 398 g~i~vw~~~~~~~~~ 412 (419)
+.+.+|+........
T Consensus 392 ~~~~~~~~~~~~~~~ 406 (466)
T COG2319 392 GTVRLWDLSTGSLLR 406 (466)
T ss_pred CceEEEecccCeeee
Confidence 999999999766543
No 166
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.89 E-value=7.5e-19 Score=151.57 Aligned_cols=321 Identities=15% Similarity=0.134 Sum_probs=195.9
Q ss_pred CCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeE
Q 014755 59 SEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGV 138 (419)
Q Consensus 59 ~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~ 138 (419)
++++++...++|.|.+.|..+.+.+.++......-..+.|+|||+++++++.++ .|.++|+.+++.+..........++
T Consensus 5 ~~l~~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg-~vsviD~~~~~~v~~i~~G~~~~~i 83 (369)
T PF02239_consen 5 GNLFYVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDG-TVSVIDLATGKVVATIKVGGNPRGI 83 (369)
T ss_dssp GGEEEEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTS-EEEEEETTSSSEEEEEE-SSEEEEE
T ss_pred ccEEEEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCC-eEEEEECCcccEEEEEecCCCcceE
Confidence 345555555568999999999999988876655545678999999999999876 9999999999988744455667899
Q ss_pred EEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccc-------cceeeeeECCCCCeEEEEcCCCCceEEEEcC-CC
Q 014755 139 AFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDT-------LDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DG 210 (419)
Q Consensus 139 ~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~ 210 (419)
++++||++++++... .+.+.++|.++.+.++.+.... ..+..+..+|....+++. ....+.|.+.|. +.
T Consensus 84 ~~s~DG~~~~v~n~~--~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~-lkd~~~I~vVdy~d~ 160 (369)
T PF02239_consen 84 AVSPDGKYVYVANYE--PGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVN-LKDTGEIWVVDYSDP 160 (369)
T ss_dssp EE--TTTEEEEEEEE--TTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEE-ETTTTEEEEEETTTS
T ss_pred EEcCCCCEEEEEecC--CCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEE-EccCCeEEEEEeccc
Confidence 999999999998876 3799999999999998876532 346677788888855542 344588999887 43
Q ss_pred ceEE--EEeecCCCCceeEEEEccCCCeEEEEE-ecCcEEEEEcCCceeeeeecc---cccccC-----CCccceeccCC
Q 014755 211 RCLL--KYQAYESGLGVKSISWSPCGQFLAVGS-YDQTLRVLNHLTWKTFAEFMH---LSTVRG-----PCFPAVFKEVD 279 (419)
Q Consensus 211 ~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~---~~~~~~-----~~~~~~~~~~~ 279 (419)
+.+. .+.. .. ......|+|++++++.+. .++.|-++|..+++.+..+.. +.+... +.....|..
T Consensus 161 ~~~~~~~i~~-g~--~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~-- 235 (369)
T PF02239_consen 161 KNLKVTTIKV-GR--FPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWAT-- 235 (369)
T ss_dssp SCEEEEEEE---T--TEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEE--
T ss_pred cccceeeecc-cc--cccccccCcccceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEee--
Confidence 3332 2222 22 578899999999877754 467899999999887766541 111100 000001110
Q ss_pred CcccccceeeeccCccccccccccCCceEEEEEeccCC-CCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEe---cCCC
Q 014755 280 EPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIP-ISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTR---NDSM 355 (419)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~---~~d~ 355 (419)
.+... ............ .....++.....+....+ ..+..+|+++++.+. +.+
T Consensus 236 --~~~~~-------------------~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~g-lFi~thP~s~~vwvd~~~~~~- 292 (369)
T PF02239_consen 236 --SGLGY-------------------FAIPLIGTDPVSVHDDYAWKVVKTIPTQGGG-LFIKTHPDSRYVWVDTFLNPD- 292 (369)
T ss_dssp --EBSSS-------------------SEEEEEE--TTT-STTTBTSEEEEEE-SSSS---EE--TT-SEEEEE-TT-SS-
T ss_pred --ccccc-------------------eecccccCCccccchhhcCeEEEEEECCCCc-ceeecCCCCccEEeeccCCCC-
Confidence 00000 000111111111 122233333333334444 678889999999988 332
Q ss_pred CceEEEeeccCCCceeecc--cCCCeeEEEeCCCCCeEEEEeC--CCcEEEeecCCCeEE
Q 014755 356 PTTLWIWDICRQEPAAILV--QKDPIRAATWDPTCTRLVLCTG--SSHLYMWTPSGAYCV 411 (419)
Q Consensus 356 ~~~i~iwd~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~--dg~i~vw~~~~~~~~ 411 (419)
.++|.++|.++.+....+. ....+..+.|++||+.+..+.. ++.|.+||..+.+++
T Consensus 293 ~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~~Tl~~~ 352 (369)
T PF02239_consen 293 ADTVQVIDKKTLKVVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDAKTLKEK 352 (369)
T ss_dssp HT-EEEEECCGTEEEE-HHHHHT--EEEEEE-TTSSEEEEEEE--TTEEEEEETTTTEEE
T ss_pred CceEEEEECcCcceeEEEeccCCCcEeccEECCCCCEEEEEEecCCCEEEEEECCCcEEE
Confidence 3899999999988776664 3345999999999996644433 347999999987664
No 167
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.89 E-value=7.1e-20 Score=162.70 Aligned_cols=376 Identities=13% Similarity=0.103 Sum_probs=245.6
Q ss_pred ccCeEEcCCCCEEEEEeCCeEEEEecCCCcEEE-----EeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccC--C--
Q 014755 10 TGPSCFSPNARYIAVAVDYRLVVRDAHSFKVVQ-----LFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQ--P-- 80 (419)
Q Consensus 10 ~~~~~~s~d~~~la~~~~~~i~i~~~~~~~~~~-----~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~--~-- 80 (419)
..++.+++.|.+.+..-+..+.+|+...+.... ...|.-.+++.++||+++++|++..| |.|.+|.--. +
T Consensus 163 ~~~I~~~~~ge~~~i~~~~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~d-GrI~vw~d~~~~~~~ 241 (792)
T KOG1963|consen 163 PKSIVDNNSGEFKGIVHMCKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSD-GRILVWRDFGSSDDS 241 (792)
T ss_pred CccEEEcCCceEEEEEEeeeEEEEEecccceeeccchhhhhhcccceeEEeccccceEEEeccC-CcEEEEecccccccc
Confidence 345889999998888888889999988755111 12367779999999999999999876 9999997433 1
Q ss_pred cceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEE
Q 014755 81 EWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYIN 160 (419)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~ 160 (419)
...+.+.-|..+|.+++|+++|.+|++||.++ .+.+|.+.+++...++....++..+.++||+.+.+....| ..|.
T Consensus 242 ~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~-VLv~Wq~~T~~kqfLPRLgs~I~~i~vS~ds~~~sl~~~D---NqI~ 317 (792)
T KOG1963|consen 242 ETCTLLHWHHDEVNSLSFSSDGAYLLSGGREG-VLVLWQLETGKKQFLPRLGSPILHIVVSPDSDLYSLVLED---NQIH 317 (792)
T ss_pred ccceEEEecccccceeEEecCCceEeecccce-EEEEEeecCCCcccccccCCeeEEEEEcCCCCeEEEEecC---ceEE
Confidence 23445667889999999999999999999988 9999999999966688888999999999999998888887 7888
Q ss_pred EEeccCCeEEEEEecc-----------ccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecC--------
Q 014755 161 LLSCHTWEIMGVFAVD-----------TLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYE-------- 220 (419)
Q Consensus 161 i~d~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~-------- 220 (419)
+....+.+....+.+. .+-.+.++++|.-+.++. ....+.|.+||+ +.+.+..+..-.
T Consensus 318 li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vl--n~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~ 395 (792)
T KOG1963|consen 318 LIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVL--NGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDV 395 (792)
T ss_pred EEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCceee--cCCCceEEEEeccccceeeeEEEEeecccCCcc
Confidence 8877655444333321 233567888886566665 566899999999 544444443211
Q ss_pred -CCCceeEEEEccCCCeEEEEEe--------cC--cEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceee
Q 014755 221 -SGLGVKSISWSPCGQFLAVGSY--------DQ--TLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSEL 289 (419)
Q Consensus 221 -~~~~v~~~~~s~~~~~l~~~~~--------d~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (419)
..-.++.++.+..|.++++.-. || .+++|-......-..+... +.. |.+......
T Consensus 396 n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~--I~~------------PH~~~~vat 461 (792)
T KOG1963|consen 396 NIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTK--INN------------PHGNAFVAT 461 (792)
T ss_pred eeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEE--Eec------------CCCceeEEE
Confidence 1125777888888999988742 22 5777865543322222100 000 111111111
Q ss_pred eccCc-cccccccccCCceEEEEEeccCC-----CCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEee
Q 014755 290 CLNDD-FIQGNSDATNGHIKVRYEVMEIP-----ISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWD 363 (419)
Q Consensus 290 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd 363 (419)
..... .......+..+....+|.+.... ...+..+.... -|..+++.++||.||..|+.+.+ ++|.|||
T Consensus 462 ~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~s--y~k~~i~a~~fs~dGslla~s~~---~~Itiwd 536 (792)
T KOG1963|consen 462 IFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGS--YHKTPITALCFSQDGSLLAVSFD---DTITIWD 536 (792)
T ss_pred EEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeec--cccCcccchhhcCCCcEEEEecC---CEEEEec
Confidence 11111 11133334445555666663221 11122222222 27788999999999998888776 7999999
Q ss_pred ccC-CCceeecc-cCCCeeEEEeCCCCC--eEEEEeCCCcEEEeecCCCeEE
Q 014755 364 ICR-QEPAAILV-QKDPIRAATWDPTCT--RLVLCTGSSHLYMWTPSGAYCV 411 (419)
Q Consensus 364 ~~~-~~~~~~~~-~~~~v~~~~~s~~~~--~l~s~~~dg~i~vw~~~~~~~~ 411 (419)
..+ .++....+ ...++..+.+..... ..+.......+.+|++....+.
T Consensus 537 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~WNll~~~l~ 588 (792)
T KOG1963|consen 537 YDTKNELLCTEGSRNWPIAELLFTAQTQNDGALVHATQQRLSVWNLLSMSLI 588 (792)
T ss_pred CCChhhhhccccccccchHhHhhhcccccccceeeccCceEehHhhhhhhee
Confidence 998 44444443 333444444432111 1223344678899998866554
No 168
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.89 E-value=6.6e-21 Score=163.27 Aligned_cols=153 Identities=18% Similarity=0.288 Sum_probs=116.4
Q ss_pred ceeeeeECC-CCCeEEEEcCCCCceEEEEcC--CC------ceEEEEeecCCCCceeEEEEccC-CCeEEEEEecCcEEE
Q 014755 179 DLADIEWSP-DDSAIVIWDSPLEYKVLIYSP--DG------RCLLKYQAYESGLGVKSISWSPC-GQFLAVGSYDQTLRV 248 (419)
Q Consensus 179 ~v~~~~~~~-~~~~l~~~~~~~~~~i~~~d~--~~------~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~d~~i~v 248 (419)
.|+.+.|.| |...|++ +..++.|++|.+ .| .....+..|.. .|+++.|+|- ...|+++++|-+|++
T Consensus 629 ~vtDl~WdPFD~~rLAV--a~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~e--KI~slRfHPLAadvLa~asyd~Ti~l 704 (1012)
T KOG1445|consen 629 LVTDLHWDPFDDERLAV--ATDDGQINLWRLTANGLPENEMTPEKILTIHGE--KITSLRFHPLAADVLAVASYDSTIEL 704 (1012)
T ss_pred eeeecccCCCChHHeee--cccCceEEEEEeccCCCCcccCCcceeeecccc--eEEEEEecchhhhHhhhhhccceeee
Confidence 356666766 4456677 677899999998 22 23445566665 8999999994 468999999999999
Q ss_pred EEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCC
Q 014755 249 LNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTD 328 (419)
Q Consensus 249 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (419)
||+.+++....+
T Consensus 705 WDl~~~~~~~~l-------------------------------------------------------------------- 716 (1012)
T KOG1445|consen 705 WDLANAKLYSRL-------------------------------------------------------------------- 716 (1012)
T ss_pred eehhhhhhhhee--------------------------------------------------------------------
Confidence 999887665443
Q ss_pred CCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec--c-cCCCeeEEEeCCCCCeEEEEeCCC----cEE
Q 014755 329 KPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL--V-QKDPIRAATWDPTCTRLVLCTGSS----HLY 401 (419)
Q Consensus 329 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~--~-~~~~v~~~~~s~~~~~l~s~~~dg----~i~ 401 (419)
.+|.+.|..++|||||+.+|+.+.| |+|++|+-++++....- + -...--.+.|.-||++++..+.|. .|.
T Consensus 717 -~gHtdqIf~~AWSpdGr~~AtVcKD--g~~rVy~Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~ 793 (1012)
T KOG1445|consen 717 -VGHTDQIFGIAWSPDGRRIATVCKD--GTLRVYEPRSREQPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQ 793 (1012)
T ss_pred -ccCcCceeEEEECCCCcceeeeecC--ceEEEeCCCCCCCccccCCCCccCcceeEEEEecCcEEEEecccccchhhhh
Confidence 3688899999999999999999999 99999998876533222 1 223344678888999888887764 578
Q ss_pred EeecC
Q 014755 402 MWTPS 406 (419)
Q Consensus 402 vw~~~ 406 (419)
+|+.+
T Consensus 794 ~Y~Aq 798 (1012)
T KOG1445|consen 794 MYDAQ 798 (1012)
T ss_pred hhhhh
Confidence 88776
No 169
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.89 E-value=1.4e-20 Score=168.04 Aligned_cols=219 Identities=14% Similarity=0.077 Sum_probs=154.6
Q ss_pred CeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccC--CeEEEEEccCCcceeeeecCCccEeEEEECCCCCEE
Q 014755 28 YRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKR--LMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHI 105 (419)
Q Consensus 28 ~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~--g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 105 (419)
..|++||........+..|...+.+++|||||+.|++++.++ ..|++||+.+++.. .+....+....++|+|||+.|
T Consensus 184 ~~i~i~d~dg~~~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~-~l~~~~g~~~~~~wSPDG~~L 262 (429)
T PRK01742 184 YEVRVADYDGFNQFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARK-VVASFRGHNGAPAFSPDGSRL 262 (429)
T ss_pred EEEEEECCCCCCceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceE-EEecCCCccCceeECCCCCEE
Confidence 469999998777666667888899999999999999887542 37999999887543 233233344578999999999
Q ss_pred EEEecCCCe--EEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEecc--CCeEEEEEecccccee
Q 014755 106 LTTSDFQLR--LTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCH--TWEIMGVFAVDTLDLA 181 (419)
Q Consensus 106 ~~~~~~~~~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~--~~~~~~~~~~~~~~v~ 181 (419)
++++..++. |++||+.+++...+..+...+....|+|||+.|++++..+ +...+|+++ .+.. ..+ .+.. .
T Consensus 263 a~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~--g~~~I~~~~~~~~~~-~~l-~~~~--~ 336 (429)
T PRK01742 263 AFASSKDGVLNIYVMGANGGTPSQLTSGAGNNTEPSWSPDGQSILFTSDRS--GSPQVYRMSASGGGA-SLV-GGRG--Y 336 (429)
T ss_pred EEEEecCCcEEEEEEECCCCCeEeeccCCCCcCCEEECCCCCEEEEEECCC--CCceEEEEECCCCCe-EEe-cCCC--C
Confidence 987643335 4555777777777766666778999999999988876532 556666654 3322 222 2322 4
Q ss_pred eeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcC--Cceeee
Q 014755 182 DIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHL--TWKTFA 258 (419)
Q Consensus 182 ~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~--~~~~~~ 258 (419)
...|+|||+.+++.. . ..+.+||+ +++.. .+.... ....+.|+|+|++|++++.++.+.+|++. +++..+
T Consensus 337 ~~~~SpDG~~ia~~~--~-~~i~~~Dl~~g~~~-~lt~~~---~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~ 409 (429)
T PRK01742 337 SAQISADGKTLVMIN--G-DNVVKQDLTSGSTE-VLSSTF---LDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKA 409 (429)
T ss_pred CccCCCCCCEEEEEc--C-CCEEEEECCCCCeE-EecCCC---CCCCceECCCCCEEEEEEcCCCceEEEEEECCCCceE
Confidence 678999999998743 2 45677998 55543 332221 24578899999999999999988888753 455555
Q ss_pred ee
Q 014755 259 EF 260 (419)
Q Consensus 259 ~~ 260 (419)
.+
T Consensus 410 ~l 411 (429)
T PRK01742 410 RL 411 (429)
T ss_pred Ec
Confidence 54
No 170
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.88 E-value=2.3e-18 Score=156.34 Aligned_cols=313 Identities=17% Similarity=0.279 Sum_probs=234.5
Q ss_pred eEE-cCCCC-EEEEE-e-CCeEEEEecCC-CcEE-EEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeee
Q 014755 13 SCF-SPNAR-YIAVA-V-DYRLVVRDAHS-FKVV-QLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKI 86 (419)
Q Consensus 13 ~~~-s~d~~-~la~~-~-~~~i~i~~~~~-~~~~-~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~ 86 (419)
+.+ ++++. +++.. . ++.+.+|+... .... ....|...|..++|+|+++.++.++..++.+++|++..+..+..+
T Consensus 115 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (466)
T COG2319 115 LALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTL 194 (466)
T ss_pred EEEECCCcceEEeccCCCCccEEEEEecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEee
Confidence 444 88888 44443 3 67899999997 4444 455699999999999999988888642489999999988888888
Q ss_pred ecCCccEeEEEECCCCCEEEEE-ecCCCeEEEEEcCCCeEEE--eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEe
Q 014755 87 DEGLAGIAYARWSPDSRHILTT-SDFQLRLTVWSLLNTACVH--VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLS 163 (419)
Q Consensus 87 ~~~~~~v~~~~~~~~~~~l~~~-~~~~~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d 163 (419)
..|...+.+++|+|++..++.+ +.++ .+.+||...+.... +..+.... ...|+|++..+++++.+ +.+++|+
T Consensus 195 ~~~~~~v~~~~~~~~~~~~~~~~~~d~-~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d---~~~~~~~ 269 (466)
T COG2319 195 AGHTDPVSSLAFSPDGGLLIASGSSDG-TIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSD---GTIRLWD 269 (466)
T ss_pred ccCCCceEEEEEcCCcceEEEEecCCC-cEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCC---CcEEEee
Confidence 8899999999999999844444 6666 99999988776665 55555554 34899999888877776 8999999
Q ss_pred ccCCeE-EEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEe--ecCCCCceeEEEEccCCCeEEE
Q 014755 164 CHTWEI-MGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQ--AYESGLGVKSISWSPCGQFLAV 239 (419)
Q Consensus 164 ~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~ 239 (419)
++.... ...+..|...+.++.|.|++..++. +..++.+.+|+. ......... .+.. .+..+.+.+++..++.
T Consensus 270 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 345 (466)
T COG2319 270 LRSSSSLLRTLSGHSSSVLSVAFSPDGKLLAS--GSSDGTVRLWDLETGKLLSSLTLKGHEG--PVSSLSFSPDGSLLVS 345 (466)
T ss_pred ecCCCcEEEEEecCCccEEEEEECCCCCEEEE--eeCCCcEEEEEcCCCceEEEeeecccCC--ceEEEEECCCCCEEEE
Confidence 987654 4444667889999999998888887 444577999988 444444444 3333 6888888434355555
Q ss_pred E-EecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCC
Q 014755 240 G-SYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPI 318 (419)
Q Consensus 240 ~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (419)
+ ..|+.+++|+...........
T Consensus 346 ~~~~d~~~~~~~~~~~~~~~~~~--------------------------------------------------------- 368 (466)
T COG2319 346 GGSDDGTIRLWDLRTGKPLKTLE--------------------------------------------------------- 368 (466)
T ss_pred eecCCCcEEeeecCCCceeEEec---------------------------------------------------------
Confidence 5 677889999987755111110
Q ss_pred CCCCCCCCCCCCCCCcceEEEEEccCCeEEEE-ecCCCCceEEEeeccCCCceeecccC-CCeeEEEeCCCCCeEEEEeC
Q 014755 319 SLPFQKPPTDKPNPKQGIGLMSWSSDSQYICT-RNDSMPTTLWIWDICRQEPAAILVQK-DPIRAATWDPTCTRLVLCTG 396 (419)
Q Consensus 319 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~-~~~d~~~~i~iwd~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~s~~~ 396 (419)
....+..+.+++ ...+.. +..+ +.+.+|+............. ..+....+++++..+++++.
T Consensus 369 -------------~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (466)
T COG2319 369 -------------GHSNVLSVSFSP-DGRVVSSGSTD--GTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSS 432 (466)
T ss_pred -------------CCceEEEEEECC-CCCEEEEecCC--CceEEEecccCeeeeeccCCCCcEEEEEECCCCcEEEEecC
Confidence 011156788888 533333 5666 99999999988877776544 89999999999999999999
Q ss_pred CCcEEEeecCC
Q 014755 397 SSHLYMWTPSG 407 (419)
Q Consensus 397 dg~i~vw~~~~ 407 (419)
++.+++|++.+
T Consensus 433 ~~~~~~~~~~~ 443 (466)
T COG2319 433 DNTIRLWDLKT 443 (466)
T ss_pred CCcEEEEeccC
Confidence 99999999987
No 171
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.88 E-value=1e-20 Score=152.04 Aligned_cols=233 Identities=14% Similarity=0.223 Sum_probs=170.4
Q ss_pred ccCeEEcCCCCEEEEE--e-CCeEEEEecCCC----------------cEEEEe-ecCcceeEEEEecCC-CeEEEEecc
Q 014755 10 TGPSCFSPNARYIAVA--V-DYRLVVRDAHSF----------------KVVQLF-SCLDKISYIEWALDS-EYILCGLYK 68 (419)
Q Consensus 10 ~~~~~~s~d~~~la~~--~-~~~i~i~~~~~~----------------~~~~~~-~~~~~v~~~~~s~~~-~~l~~~~~~ 68 (419)
.+.+.-++-|+-.+++ + .|.|.||++... +++..+ +|...=+.+.|||-. ..|++|...
T Consensus 154 ~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~ 233 (440)
T KOG0302|consen 154 INRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRLLSGDCV 233 (440)
T ss_pred cceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccccccCccc
Confidence 3346666655433333 4 688999997521 122222 477888999999922 236666544
Q ss_pred CCeEEEEEccCCccee---eeecCCccEeEEEECCCC-CEEEEEecCCCeEEEEEcCCC---eEEEeccCCCCeeeEEEc
Q 014755 69 RLMIQAWSLTQPEWTC---KIDEGLAGIAYARWSPDS-RHILTTSDFQLRLTVWSLLNT---ACVHVQSPKHASKGVAFT 141 (419)
Q Consensus 69 ~g~i~iw~~~~~~~~~---~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~~i~iwd~~~~---~~~~~~~~~~~~~~~~~~ 141 (419)
+.|++|...++.+.. .+.+|...|..++|||.. ..+++|+.|+ .|+|||++.+ .++....|...|+.+.|+
T Consensus 234 -~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~Dg-sIrIWDiRs~~~~~~~~~kAh~sDVNVISWn 311 (440)
T KOG0302|consen 234 -KGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDG-SIRIWDIRSGPKKAAVSTKAHNSDVNVISWN 311 (440)
T ss_pred -cceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCc-eEEEEEecCCCccceeEeeccCCceeeEEcc
Confidence 689999999886542 356799999999999965 4567777777 9999999987 455578899999999999
Q ss_pred cCCCEEEEEeecCCCCeEEEEeccC---CeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCC--Cc-----
Q 014755 142 QDGKFAAICTRRDCKDYINLLSCHT---WEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPD--GR----- 211 (419)
Q Consensus 142 ~~~~~l~~~~~~~~~g~v~i~d~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~--~~----- 211 (419)
.+-.+|++|+.+ |+++|||+++ ++++..++.|..+|+++.|+|.....+.. ++.|.+|.+||+. ..
T Consensus 312 r~~~lLasG~Dd---Gt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaa-sg~D~QitiWDlsvE~D~ee~~ 387 (440)
T KOG0302|consen 312 RREPLLASGGDD---GTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAA-SGEDNQITIWDLSVEADEEEID 387 (440)
T ss_pred CCcceeeecCCC---ceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEe-ccCCCcEEEEEeeccCChhhhc
Confidence 998888888876 9999999987 67888999999999999999987655443 5669999999981 11
Q ss_pred ----------eEEEEeecCCCCceeEEEEccCC-CeEEEEEecCcEEEE
Q 014755 212 ----------CLLKYQAYESGLGVKSISWSPCG-QFLAVGSYDQTLRVL 249 (419)
Q Consensus 212 ----------~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~d~~i~v~ 249 (419)
+.+.+-.|.....+..+.|+++- -+|++.+.|| +.||
T Consensus 388 ~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dG-fnVf 435 (440)
T KOG0302|consen 388 QEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDG-FNVF 435 (440)
T ss_pred cccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccc-eeEE
Confidence 11122334344468889999864 3777777776 4444
No 172
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.88 E-value=6.9e-21 Score=161.85 Aligned_cols=274 Identities=10% Similarity=0.143 Sum_probs=194.8
Q ss_pred EeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEE-EecCCCeEEEEEcC
Q 014755 43 LFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILT-TSDFQLRLTVWSLL 121 (419)
Q Consensus 43 ~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~~~~~i~iwd~~ 121 (419)
..+|++.|.+|+..|.|.+|++|+.| |+|+||.+.+|.+++++. ..+.|.+++|+|.+..-+. ++... .+.+.+..
T Consensus 396 yrGHtg~Vr~iSvdp~G~wlasGsdD-GtvriWEi~TgRcvr~~~-~d~~I~~vaw~P~~~~~vLAvA~~~-~~~ivnp~ 472 (733)
T KOG0650|consen 396 YRGHTGLVRSISVDPSGEWLASGSDD-GTVRIWEIATGRCVRTVQ-FDSEIRSVAWNPLSDLCVLAVAVGE-CVLIVNPI 472 (733)
T ss_pred EeccCCeEEEEEecCCcceeeecCCC-CcEEEEEeecceEEEEEe-ecceeEEEEecCCCCceeEEEEecC-ceEEeCcc
Confidence 34699999999999999999999965 999999999999998874 5568999999997765333 33333 56566554
Q ss_pred CCeEEEeccCCCCeeeEEEccCCCEEEEE-eecCCCCeEEEEeccCC----eEEEEEeccccceeeeeECCCCCeEEEEc
Q 014755 122 NTACVHVQSPKHASKGVAFTQDGKFAAIC-TRRDCKDYINLLSCHTW----EIMGVFAVDTLDLADIEWSPDDSAIVIWD 196 (419)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~g~v~i~d~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 196 (419)
-|..+... +....|+.+ .....++.+..|.-... .-++..-.|...|..+.|+..|.+|++..
T Consensus 473 ~G~~~e~~------------~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~ 540 (733)
T KOG0650|consen 473 FGDRLEVG------------PTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVM 540 (733)
T ss_pred ccchhhhc------------chhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEec
Confidence 44221100 001111111 00001134555544321 11334445778999999999999999854
Q ss_pred CC-CCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccce
Q 014755 197 SP-LEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAV 274 (419)
Q Consensus 197 ~~-~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 274 (419)
.. ....|.++++ .......+....+ .|.++.|+|...++++++. ..|++||+.....++.+.
T Consensus 541 ~~~~~~~VliHQLSK~~sQ~PF~kskG--~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kqelvKkL~------------- 604 (733)
T KOG0650|consen 541 PDSGNKSVLIHQLSKRKSQSPFRKSKG--LVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQELVKKLL------------- 604 (733)
T ss_pred cCCCcceEEEEecccccccCchhhcCC--ceeEEEecCCCceEEEEec-cceEEEehhHHHHHHHHh-------------
Confidence 43 2367888988 3333333332223 6999999999999888885 589999998877666553
Q ss_pred eccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCC
Q 014755 275 FKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDS 354 (419)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d 354 (419)
....+|..++.+|.|.-|+.|+.|
T Consensus 605 --------------------------------------------------------tg~kwiS~msihp~GDnli~gs~d 628 (733)
T KOG0650|consen 605 --------------------------------------------------------TGSKWISSMSIHPNGDNLILGSYD 628 (733)
T ss_pred --------------------------------------------------------cCCeeeeeeeecCCCCeEEEecCC
Confidence 123458899999999999999999
Q ss_pred CCceEEEeeccCC-Cceeec-ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeec
Q 014755 355 MPTTLWIWDICRQ-EPAAIL-VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTP 405 (419)
Q Consensus 355 ~~~~i~iwd~~~~-~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 405 (419)
+.+..||+.-. ++...+ -|...+++|+|++.-.++++|+.||++.|+.-
T Consensus 629 --~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg 679 (733)
T KOG0650|consen 629 --KKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHG 679 (733)
T ss_pred --CeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEee
Confidence 99999999865 444444 49999999999999999999999999998853
No 173
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.88 E-value=1.2e-20 Score=152.55 Aligned_cols=292 Identities=10% Similarity=0.174 Sum_probs=211.1
Q ss_pred EeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC------cceeeee-cCCccEeEEEECCCCCEEEEEecCCCeE
Q 014755 43 LFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP------EWTCKID-EGLAGIAYARWSPDSRHILTTSDFQLRL 115 (419)
Q Consensus 43 ~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~------~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~~i 115 (419)
+.+|.+-|.++.||.++++|++|+.| -.+++|.++.. +++.... .|...|.|++|.....++++++.++ +|
T Consensus 52 ~~~H~GCiNAlqFS~N~~~L~SGGDD-~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~-~V 129 (609)
T KOG4227|consen 52 VREHTGCINALQFSHNDRFLASGGDD-MHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWG-TV 129 (609)
T ss_pred hhhhccccceeeeccCCeEEeecCCc-ceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcc-ee
Confidence 44689999999999999999999966 69999998632 4443332 3447899999999999999999888 99
Q ss_pred EEEEcCCCeEEEeccCCC---CeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCe-EEEE--EeccccceeeeeECCCC
Q 014755 116 TVWSLLNTACVHVQSPKH---ASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWE-IMGV--FAVDTLDLADIEWSPDD 189 (419)
Q Consensus 116 ~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~-~~~~--~~~~~~~v~~~~~~~~~ 189 (419)
.+.|+++.+.+.+..+.. .|..+..+|..+.+++.+.+ +.|.+||.+... .... +.......+.+.|+|-.
T Consensus 130 I~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~---~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~ 206 (609)
T KOG4227|consen 130 IKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRA---KLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPET 206 (609)
T ss_pred EeeecccceeeeeecccCcccceeecccCCCCceEEEEecC---ceEEEEeccCCCCCCceeeecCCCccceeeeecCCC
Confidence 999999999888555554 78999999999999998886 899999998754 2222 22234567889999987
Q ss_pred CeEEEEcCCCCceEEEEcC--CCceEEEEeecC---C-CCceeEEEEccCCCeEEEEEecCcEEEEEcCCcee-eeeecc
Q 014755 190 SAIVIWDSPLEYKVLIYSP--DGRCLLKYQAYE---S-GLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKT-FAEFMH 262 (419)
Q Consensus 190 ~~l~~~~~~~~~~i~~~d~--~~~~~~~~~~~~---~-~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~-~~~~~~ 262 (419)
..|+.. .+..+.+-+||. ....+....... . ...-.++.|+|+|+.+++.-....-.+||+-+.++ +..+.|
T Consensus 207 P~Li~~-~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D~ 285 (609)
T KOG4227|consen 207 PALILV-NSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSDH 285 (609)
T ss_pred ceeEEe-ccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEeccC
Confidence 766654 345677889998 222222211111 1 11235788999999888877666667788766332 222222
Q ss_pred cccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEc
Q 014755 263 LSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWS 342 (419)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 342 (419)
...-+ .....+.+++|-
T Consensus 286 N~~GY---------------------------------------------------------------~N~~T~KS~~F~ 302 (609)
T KOG4227|consen 286 NPNGY---------------------------------------------------------------CNIKTIKSMTFI 302 (609)
T ss_pred CCCcc---------------------------------------------------------------eeeeeeeeeeee
Confidence 21000 122346778887
Q ss_pred cCCeEEEEecCCCCceEEEeeccC------------------------CCceeecccCCCeeEEEeCCCCCeEEEEeCCC
Q 014755 343 SDSQYICTRNDSMPTTLWIWDICR------------------------QEPAAILVQKDPIRAATWDPTCTRLVLCTGSS 398 (419)
Q Consensus 343 ~~g~~l~~~~~d~~~~i~iwd~~~------------------------~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg 398 (419)
-|-. +++|+.+ -.|++|.+.. +++..+.+|.+-++.|.|+|...+|++.+-.+
T Consensus 303 ~D~~-v~tGSD~--~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~H~~~l~SSGVE~ 379 (609)
T KOG4227|consen 303 DDYT-VATGSDH--WGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQHNNLLVSSGVEN 379 (609)
T ss_pred ccee-eeccCcc--cceEEEecCCCccccCccccCcchhhCchhheecceeEEEecccccccceeecCCcceEeccchhh
Confidence 6644 8999998 9999998753 12223447999999999999999999999999
Q ss_pred cEEEeecC
Q 014755 399 HLYMWTPS 406 (419)
Q Consensus 399 ~i~vw~~~ 406 (419)
.++||..-
T Consensus 380 ~~KlWS~~ 387 (609)
T KOG4227|consen 380 SFKLWSDH 387 (609)
T ss_pred heeccccc
Confidence 99999764
No 174
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.88 E-value=2.5e-22 Score=182.97 Aligned_cols=239 Identities=16% Similarity=0.266 Sum_probs=187.9
Q ss_pred eEEcCCCCE----EEEEe-CCeEEEEecCCC---c---EEE-EeecCcceeEEEEecCCC-eEEEEeccCCeEEEEEccC
Q 014755 13 SCFSPNARY----IAVAV-DYRLVVRDAHSF---K---VVQ-LFSCLDKISYIEWALDSE-YILCGLYKRLMIQAWSLTQ 79 (419)
Q Consensus 13 ~~~s~d~~~----la~~~-~~~i~i~~~~~~---~---~~~-~~~~~~~v~~~~~s~~~~-~l~~~~~~~g~i~iw~~~~ 79 (419)
++|.+.|.. ||.|. ||.|.+||.... . .+. .-.|++.|..+.|++... +||+|+.+ |.|.|||+.+
T Consensus 70 L~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~-geI~iWDlnn 148 (1049)
T KOG0307|consen 70 LAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADD-GEILIWDLNK 148 (1049)
T ss_pred eeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCC-CcEEEeccCC
Confidence 889998776 66665 899999997652 1 122 334999999999999766 77777755 9999999998
Q ss_pred Ccceeeee--cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCC--CeeeEEEccCC-CEEEEEeec
Q 014755 80 PEWTCKID--EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKH--ASKGVAFTQDG-KFAAICTRR 153 (419)
Q Consensus 80 ~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~--~~~~~~~~~~~-~~l~~~~~~ 153 (419)
.+...... ...+.|.+++|+..-+++++.+...|.+.|||++..+.+. +..+.. .+..++|+|+. ..+++++.|
T Consensus 149 ~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~d 228 (1049)
T KOG0307|consen 149 PETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGD 228 (1049)
T ss_pred cCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCC
Confidence 76554442 2346799999998766665554444599999999886665 444443 35899999998 678888888
Q ss_pred CCCCeEEEEeccC-CeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEc
Q 014755 154 DCKDYINLLSCHT-WEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWS 231 (419)
Q Consensus 154 ~~~g~v~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s 231 (419)
+..-.|.+||+|. ...++.++.|...|.++.|++.+..+++. +..|+.|.+|+. +|+.+..+....+ ++..+.|.
T Consensus 229 d~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllS-sgkD~~ii~wN~~tgEvl~~~p~~~n--W~fdv~w~ 305 (1049)
T KOG0307|consen 229 DSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLS-SGKDNRIICWNPNTGEVLGELPAQGN--WCFDVQWC 305 (1049)
T ss_pred CCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhc-ccCCCCeeEecCCCceEeeecCCCCc--ceeeeeec
Confidence 7667999999987 45677888999999999999988555443 677999999999 8999988877555 89999999
Q ss_pred cCCC-eEEEEEecCcEEEEEcCCce
Q 014755 232 PCGQ-FLAVGSYDQTLRVLNHLTWK 255 (419)
Q Consensus 232 ~~~~-~l~~~~~d~~i~v~d~~~~~ 255 (419)
|... .++.++.||.|.||.+.+..
T Consensus 306 pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 306 PRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred CCCcchhhhheeccceeeeeeecCC
Confidence 9775 88888999999999987654
No 175
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.88 E-value=4.4e-20 Score=151.48 Aligned_cols=234 Identities=12% Similarity=0.149 Sum_probs=171.6
Q ss_pred eEEcCCCCEEEEEe-C-C--e--EEEEecCCCcEEEEeec----CcceeEEEEec-------CCCeEEEEeccCCeEEEE
Q 014755 13 SCFSPNARYIAVAV-D-Y--R--LVVRDAHSFKVVQLFSC----LDKISYIEWAL-------DSEYILCGLYKRLMIQAW 75 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~-~--~--i~i~~~~~~~~~~~~~~----~~~v~~~~~s~-------~~~~l~~~~~~~g~i~iw 75 (419)
+.+-|...+|+++- + + . +++|+-.... ....| .....|++|.. -|+++|.|+.+ ..|.||
T Consensus 131 ~~V~psDnlIl~ar~eddvs~LEvYVyn~~e~n--lYvHHD~ilpafPLC~ewld~~~~~~~~gNyvAiGtmd-p~IeIW 207 (463)
T KOG0270|consen 131 EQVKPSDNLILCARNEDDVSYLEVYVYNEEEEN--LYVHHDFILPAFPLCIEWLDHGSKSGGAGNYVAIGTMD-PEIEIW 207 (463)
T ss_pred ceeccCCcEEEEeeccCCceEEEEEEEcCCCcc--eeEecceeccCcchhhhhhhcCCCCCCCcceEEEeccC-ceeEEe
Confidence 56677677777774 2 2 2 5566544311 11122 23446777753 36799999988 699999
Q ss_pred EccCCc---ceee------------------eecCCccEeEEEECCCCC-EEEEEecCCCeEEEEEcCCCeEEE-eccCC
Q 014755 76 SLTQPE---WTCK------------------IDEGLAGIAYARWSPDSR-HILTTSDFQLRLTVWSLLNTACVH-VQSPK 132 (419)
Q Consensus 76 ~~~~~~---~~~~------------------~~~~~~~v~~~~~~~~~~-~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~ 132 (419)
|+.-.. +..+ ..+|+..|.++.|+..-+ .|++++.|. +|++||+.++++.. +..|.
T Consensus 208 DLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~-TV~lWD~~~g~p~~s~~~~~ 286 (463)
T KOG0270|consen 208 DLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADK-TVKLWDVDTGKPKSSITHHG 286 (463)
T ss_pred ccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCc-eEEEEEcCCCCcceehhhcC
Confidence 986221 0011 124777788899988654 466677777 99999999999998 77799
Q ss_pred CCeeeEEEccCC-CEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC--C
Q 014755 133 HASKGVAFTQDG-KFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP--D 209 (419)
Q Consensus 133 ~~~~~~~~~~~~-~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~--~ 209 (419)
..|.++.|+|.. ..|++|+.| ++|.+.|.+........-...+.|-.++|.|.....++. +..+|.++-+|+ .
T Consensus 287 k~Vq~l~wh~~~p~~LLsGs~D---~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~~se~~f~~-~tddG~v~~~D~R~~ 362 (463)
T KOG0270|consen 287 KKVQTLEWHPYEPSVLLSGSYD---GTVALKDCRDPSNSGKEWKFDGEVEKVAWDPHSENSFFV-STDDGTVYYFDIRNP 362 (463)
T ss_pred CceeEEEecCCCceEEEecccc---ceEEeeeccCccccCceEEeccceEEEEecCCCceeEEE-ecCCceEEeeecCCC
Confidence 999999999976 778888887 899999999533222222235789999999988776654 466899999999 6
Q ss_pred CceEEEEeecCCCCceeEEEEccCC-CeEEEEEecCcEEEEEcCCcee
Q 014755 210 GRCLLKYQAYESGLGVKSISWSPCG-QFLAVGSYDQTLRVLNHLTWKT 256 (419)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~~~~~ 256 (419)
++++.++..|.. +|.++++++.- .++++++.|+.|++|++..-.+
T Consensus 363 ~~~vwt~~AHd~--~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~ 408 (463)
T KOG0270|consen 363 GKPVWTLKAHDD--EISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSP 408 (463)
T ss_pred CCceeEEEeccC--CcceEEecCCCCcceeeccccceEEEEeecCCCC
Confidence 789999999887 89999999865 4788999999999999865433
No 176
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.88 E-value=4.2e-20 Score=164.91 Aligned_cols=236 Identities=17% Similarity=0.105 Sum_probs=165.2
Q ss_pred CeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCC--CeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEE
Q 014755 70 LMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQ--LRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFA 147 (419)
Q Consensus 70 g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~--~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l 147 (419)
..|.+||..... ...+..+...+..++|+|||+.|++++.++ ..|++||+.+++...+.........++|+|||+.|
T Consensus 184 ~~i~i~d~dg~~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~~~~~~wSPDG~~L 262 (429)
T PRK01742 184 YEVRVADYDGFN-QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGHNGAPAFSPDGSRL 262 (429)
T ss_pred EEEEEECCCCCC-ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCccCceeECCCCCEE
Confidence 589999987655 456777888899999999999999887432 37999999988765544444445679999999999
Q ss_pred EEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC--CCceEEEEeecCCCCce
Q 014755 148 AICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP--DGRCLLKYQAYESGLGV 225 (419)
Q Consensus 148 ~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~--~~~~~~~~~~~~~~~~v 225 (419)
+++...++.-.|++||+.+++. ..+..+...+..+.|+|||+.+++.. ..++...+|++ .+.....+ .+. .
T Consensus 263 a~~~~~~g~~~Iy~~d~~~~~~-~~lt~~~~~~~~~~wSpDG~~i~f~s-~~~g~~~I~~~~~~~~~~~~l-~~~---~- 335 (429)
T PRK01742 263 AFASSKDGVLNIYVMGANGGTP-SQLTSGAGNNTEPSWSPDGQSILFTS-DRSGSPQVYRMSASGGGASLV-GGR---G- 335 (429)
T ss_pred EEEEecCCcEEEEEEECCCCCe-EeeccCCCCcCCEEECCCCCEEEEEE-CCCCCceEEEEECCCCCeEEe-cCC---C-
Confidence 9876432222456667766654 44555666788999999999887642 23455566654 44433333 221 2
Q ss_pred eEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCC
Q 014755 226 KSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNG 305 (419)
Q Consensus 226 ~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (419)
....|+|+|++|++.+.++ +.+||+.+++.......
T Consensus 336 ~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~------------------------------------------- 371 (429)
T PRK01742 336 YSAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSST------------------------------------------- 371 (429)
T ss_pred CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecCC-------------------------------------------
Confidence 4578999999998887764 66699887754321110
Q ss_pred ceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeecc--CCCceeec-ccCCCeeEE
Q 014755 306 HIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDIC--RQEPAAIL-VQKDPIRAA 382 (419)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~--~~~~~~~~-~~~~~v~~~ 382 (419)
+ ....+.|+|||++|++++.+ +.+.+|++. +++....+ .|.+.+..+
T Consensus 372 --------------------------~--~~~~~~~sPdG~~i~~~s~~--g~~~~l~~~~~~G~~~~~l~~~~g~~~~p 421 (429)
T PRK01742 372 --------------------------F--LDESPSISPNGIMIIYSSTQ--GLGKVLQLVSADGRFKARLPGSDGQVKFP 421 (429)
T ss_pred --------------------------C--CCCCceECCCCCEEEEEEcC--CCceEEEEEECCCCceEEccCCCCCCCCc
Confidence 0 01346799999999999887 877777653 45555555 578889999
Q ss_pred EeCCC
Q 014755 383 TWDPT 387 (419)
Q Consensus 383 ~~s~~ 387 (419)
+|+|-
T Consensus 422 ~wsp~ 426 (429)
T PRK01742 422 AWSPY 426 (429)
T ss_pred ccCCC
Confidence 99985
No 177
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.88 E-value=2.4e-19 Score=154.56 Aligned_cols=288 Identities=15% Similarity=0.115 Sum_probs=191.2
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecC--
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEG-- 89 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~-- 89 (419)
++|+|||+++++++ ++.|.++|+.+++.+..+.-......+++|+||++++++....+.+.++|.++.+.+..+...
T Consensus 42 ~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~ 121 (369)
T PF02239_consen 42 LKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGM 121 (369)
T ss_dssp EE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE
T ss_pred EEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCCcceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccc
Confidence 67999999999998 889999999999999988877778999999999999999887799999999999988876543
Q ss_pred -----CccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE--eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEE
Q 014755 90 -----LAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH--VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLL 162 (419)
Q Consensus 90 -----~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~ 162 (419)
...+..+..+|....+++.-.+.+.|.+.|....+... ............|+|++++++++... .+.|-++
T Consensus 122 ~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~--sn~i~vi 199 (369)
T PF02239_consen 122 PVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANG--SNKIAVI 199 (369)
T ss_dssp -TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGG--GTEEEEE
T ss_pred cccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeecccccccccccCcccceeeecccc--cceeEEE
Confidence 24577888899988777777766699888987754333 33445566889999999998887654 3699999
Q ss_pred eccCCeEEEEEec----cccceeeeeECCCCCeEEEEcC--------CCCceEEEEcC-CCceEEEEeecCCCCceeEEE
Q 014755 163 SCHTWEIMGVFAV----DTLDLADIEWSPDDSAIVIWDS--------PLEYKVLIYSP-DGRCLLKYQAYESGLGVKSIS 229 (419)
Q Consensus 163 d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~--------~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~ 229 (419)
|.++++.+..+.. |..+...+ .+|....+..... -....+.+||. +.+.++.+..... + ..+.
T Consensus 200 D~~~~k~v~~i~~g~~p~~~~~~~~-php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~--g-lFi~ 275 (369)
T PF02239_consen 200 DTKTGKLVALIDTGKKPHPGPGANF-PHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGG--G-LFIK 275 (369)
T ss_dssp ETTTTEEEEEEE-SSSBEETTEEEE-EETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSEEEEEE-SSS--S---EE
T ss_pred eeccceEEEEeeccccccccccccc-cCCCcceEEeeccccceecccccCCccccchhhcCeEEEEEECCCC--c-ceee
Confidence 9999888776543 22222222 1222211111000 01223446776 7788888887654 4 7788
Q ss_pred EccCCCeEEEE----EecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCC
Q 014755 230 WSPCGQFLAVG----SYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNG 305 (419)
Q Consensus 230 ~s~~~~~l~~~----~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (419)
.+|+++++.+. ...++|.++|.++.+.+..+....
T Consensus 276 thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~----------------------------------------- 314 (369)
T PF02239_consen 276 THPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGP----------------------------------------- 314 (369)
T ss_dssp --TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHH-----------------------------------------
T ss_pred cCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccC-----------------------------------------
Confidence 89999999988 345799999999987766654110
Q ss_pred ceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc
Q 014755 306 HIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV 374 (419)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~ 374 (419)
...+..+.|++||+.+.....+.++.|.+||..+.++...+.
T Consensus 315 ---------------------------~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~~Tl~~~~~i~ 356 (369)
T PF02239_consen 315 ---------------------------GKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDAKTLKEKKRIP 356 (369)
T ss_dssp ---------------------------T--EEEEEE-TTSSEEEEEEE--TTEEEEEETTTTEEEEEEE
T ss_pred ---------------------------CCcEeccEECCCCCEEEEEEecCCCEEEEEECCCcEEEEEEE
Confidence 112678999999998877766533589999999988877664
No 178
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=99.88 E-value=4e-21 Score=147.10 Aligned_cols=286 Identities=12% Similarity=0.168 Sum_probs=191.7
Q ss_pred ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeee-cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCC
Q 014755 45 SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKID-EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNT 123 (419)
Q Consensus 45 ~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~ 123 (419)
+|.+.|+++.|-.+++ |.+|... |.|++|++.+.+....+. .+...|+.+.-.|+ ..+.+-+.|. .+.+|++..+
T Consensus 12 p~~~~v~s~~fqa~~r-L~sg~~~-G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~-d~l~tqgRd~-~L~lw~ia~s 87 (323)
T KOG0322|consen 12 PHSSSVTSVLFQANER-LMSGLSV-GIVKMWVLQTERDLPLIRLFGRLFITNLQSIPN-DSLDTQGRDP-LLILWTIAYS 87 (323)
T ss_pred cccchheehhhccchh-hhccccc-ceEEEEEeecCccchhhhhhccceeeceeecCC-cchhhcCCCc-eEEEEEccCc
Confidence 6889999999998876 7777655 999999999988777776 56678999998887 4577778887 9999999876
Q ss_pred eEEEeccCCCCeeeEEEc-----cCC----CEEEEEeecCCCCeEEEEeccCCeEEEEEe----ccccceeeeeEC-CCC
Q 014755 124 ACVHVQSPKHASKGVAFT-----QDG----KFAAICTRRDCKDYINLLSCHTWEIMGVFA----VDTLDLADIEWS-PDD 189 (419)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~-----~~~----~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~----~~~~~v~~~~~~-~~~ 189 (419)
..+.+. .-.++++.|. +.+ ..+++-++. . ..+.+-|......+.... ...+.+.+..+. ..+
T Consensus 88 ~~i~i~--Si~~nslgFCrfSl~~~~k~~eqll~yp~rg-s-de~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~ 163 (323)
T KOG0322|consen 88 AFISIH--SIVVNSLGFCRFSLVKKPKNSEQLLEYPSRG-S-DETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACG 163 (323)
T ss_pred ceEEEe--eeeccccccccceeccCCCcchhheecCCcc-c-chhhhhccCccceeEccCchhccccCceeeeecccccc
Confidence 554421 1222333332 222 112221111 0 122233332222222211 123455665532 345
Q ss_pred CeEEEEcCCCCceEEEEcC-CCceEEEEe--------ecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeee
Q 014755 190 SAIVIWDSPLEYKVLIYSP-DGRCLLKYQ--------AYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEF 260 (419)
Q Consensus 190 ~~l~~~~~~~~~~i~~~d~-~~~~~~~~~--------~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 260 (419)
.+++...+..+|.+.+||+ ++..+-.+. ...+..+|.++.+.+.-..=++|+.+..+..|.++.......+
T Consensus 164 s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~ 243 (323)
T KOG0322|consen 164 STFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQI 243 (323)
T ss_pred ceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccc
Confidence 5555544778899999999 553322221 1123348999999876656677777778888887542111111
Q ss_pred cccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEE
Q 014755 261 MHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMS 340 (419)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 340 (419)
.... .-...+|..+.
T Consensus 244 --~~e~---------------------------------------------------------------~lknpGv~gvr 258 (323)
T KOG0322|consen 244 --RKEI---------------------------------------------------------------TLKNPGVSGVR 258 (323)
T ss_pred --cceE---------------------------------------------------------------EecCCCccceE
Confidence 0000 00123467789
Q ss_pred EccCCeEEEEecCCCCceEEEeeccCCCceeecc-cCCCeeEEEeCCCCCeEEEEeCCCcEEEeec
Q 014755 341 WSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV-QKDPIRAATWDPTCTRLVLCTGSSHLYMWTP 405 (419)
Q Consensus 341 ~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 405 (419)
+-||++.+|+++.| +.||||..++.+++..+. |...|.+++|+|+...+|+++.|++|.+|++
T Consensus 259 IRpD~KIlATAGWD--~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 259 IRPDGKILATAGWD--HRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred EccCCcEEeecccC--CcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 99999999999999 999999999999998886 9999999999999999999999999999986
No 179
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.87 E-value=4.7e-20 Score=148.23 Aligned_cols=201 Identities=11% Similarity=0.180 Sum_probs=158.6
Q ss_pred eecCcceeEEEEecCCC--eEEEEeccCCeEEEEEccCC----------------cceeeeecCCccEeEEEECCCCC-E
Q 014755 44 FSCLDKISYIEWALDSE--YILCGLYKRLMIQAWSLTQP----------------EWTCKIDEGLAGIAYARWSPDSR-H 104 (419)
Q Consensus 44 ~~~~~~v~~~~~s~~~~--~l~~~~~~~g~i~iw~~~~~----------------~~~~~~~~~~~~v~~~~~~~~~~-~ 104 (419)
.+|.+.+..+.-++-++ +.++-+ +.|.|+||++... +++.++.+|...=..++|||-.. .
T Consensus 148 i~h~g~~NRvr~~~~~~~~~~asws-e~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~ 226 (440)
T KOG0302|consen 148 IPHYGGINRVRVSRLGNEVLCASWS-ENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGR 226 (440)
T ss_pred cccccccceeeecccCCcceeeeec-ccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccccc
Confidence 45777788888877654 334444 4599999998522 45666778888889999999322 3
Q ss_pred EEEEecCCCeEEEEEcCCCeEEE----eccCCCCeeeEEEccCC-CEEEEEeecCCCCeEEEEeccCCe--EEEEEeccc
Q 014755 105 ILTTSDFQLRLTVWSLLNTACVH----VQSPKHASKGVAFTQDG-KFAAICTRRDCKDYINLLSCHTWE--IMGVFAVDT 177 (419)
Q Consensus 105 l~~~~~~~~~i~iwd~~~~~~~~----~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~g~v~i~d~~~~~--~~~~~~~~~ 177 (419)
|+++...+ .|++|...++.... +.+|...|..++|||.. ..|++++.| |+|+|||++.+. .....+.|.
T Consensus 227 LlsGDc~~-~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~D---gsIrIWDiRs~~~~~~~~~kAh~ 302 (440)
T KOG0302|consen 227 LLSGDCVK-GIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCD---GSIRIWDIRSGPKKAAVSTKAHN 302 (440)
T ss_pred cccCcccc-ceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecC---ceEEEEEecCCCccceeEeeccC
Confidence 66665545 89999999877654 67789999999999976 567778776 899999999872 222347889
Q ss_pred cceeeeeECCCCCeEEEEcCCCCceEEEEcC----CCceEEEEeecCCCCceeEEEEccCC-CeEEEEEecCcEEEEEcC
Q 014755 178 LDLADIEWSPDDSAIVIWDSPLEYKVLIYSP----DGRCLLKYQAYESGLGVKSISWSPCG-QFLAVGSYDQTLRVLNHL 252 (419)
Q Consensus 178 ~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~----~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~ 252 (419)
..|+.+.|+.+..+|++ +..+|.+.+||+ .++++..+..|.. +|+++.|+|.. ..|++++.|.+|.+||+.
T Consensus 303 sDVNVISWnr~~~lLas--G~DdGt~~iwDLR~~~~~~pVA~fk~Hk~--pItsieW~p~e~s~iaasg~D~QitiWDls 378 (440)
T KOG0302|consen 303 SDVNVISWNRREPLLAS--GGDDGTLSIWDLRQFKSGQPVATFKYHKA--PITSIEWHPHEDSVIAASGEDNQITIWDLS 378 (440)
T ss_pred CceeeEEccCCcceeee--cCCCceEEEEEhhhccCCCcceeEEeccC--CeeEEEeccccCceEEeccCCCcEEEEEee
Confidence 99999999999887777 788999999999 5678889998887 89999999964 578888899999999975
Q ss_pred C
Q 014755 253 T 253 (419)
Q Consensus 253 ~ 253 (419)
.
T Consensus 379 v 379 (440)
T KOG0302|consen 379 V 379 (440)
T ss_pred c
Confidence 3
No 180
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.87 E-value=2.2e-19 Score=159.78 Aligned_cols=219 Identities=12% Similarity=0.066 Sum_probs=159.1
Q ss_pred eEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEecc--CCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEE
Q 014755 29 RLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYK--RLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHIL 106 (419)
Q Consensus 29 ~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~--~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 106 (419)
.|+++|.++........+...+.+.+|||||+.|++.+.. +..+.+|++.+++.. .+......+..+.|+|||+.|+
T Consensus 180 ~l~~~d~dg~~~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~-~l~~~~~~~~~~~~SPDG~~La 258 (429)
T PRK03629 180 ELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLA 258 (429)
T ss_pred eEEEEcCCCCCCEEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeE-EccCCCCCcCCeEECCCCCEEE
Confidence 5999999887777777777889999999999999986532 247999999887643 3433444456789999999998
Q ss_pred EEecCCC--eEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeee
Q 014755 107 TTSDFQL--RLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIE 184 (419)
Q Consensus 107 ~~~~~~~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~ 184 (419)
......+ .|++||+++++..++......+....|+|||+.|++.+.+.+.-.|+++|+.+++.. .+...........
T Consensus 259 ~~~~~~g~~~I~~~d~~tg~~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~-~lt~~~~~~~~~~ 337 (429)
T PRK03629 259 FALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQ-RITWEGSQNQDAD 337 (429)
T ss_pred EEEcCCCCcEEEEEECCCCCEEEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeE-EeecCCCCccCEE
Confidence 7643222 699999999888776666666789999999999988876533236777787776543 3333344566789
Q ss_pred ECCCCCeEEEEcCC-CCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCc---EEEEEcC
Q 014755 185 WSPDDSAIVIWDSP-LEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQT---LRVLNHL 252 (419)
Q Consensus 185 ~~~~~~~l~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~---i~v~d~~ 252 (419)
|+|||+.+++.... ....|++||+.+.....+.... ......|+|||++|+..+.++. +.++++.
T Consensus 338 ~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~~Lt~~~---~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~ 406 (429)
T PRK03629 338 VSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLTDTF---LDETPSIAPNGTMVIYSSSQGMGSVLNLVSTD 406 (429)
T ss_pred ECCCCCEEEEEEccCCCceEEEEECCCCCeEEeCCCC---CCCCceECCCCCEEEEEEcCCCceEEEEEECC
Confidence 99999999874322 2356899999443444554321 3457889999999999988764 6666763
No 181
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.87 E-value=3.4e-19 Score=158.60 Aligned_cols=241 Identities=14% Similarity=0.104 Sum_probs=169.2
Q ss_pred eEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecC--CCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEE
Q 014755 71 MIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDF--QLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAA 148 (419)
Q Consensus 71 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 148 (419)
.|.++|.+.... +.+..+...+...+|+|||+.|+..+.. ...+.+|++.+++...+.........+.|+|||+.|+
T Consensus 180 ~l~~~d~dg~~~-~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~~~~~~~~~SPDG~~La 258 (429)
T PRK03629 180 ELRVSDYDGYNQ-FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLA 258 (429)
T ss_pred eEEEEcCCCCCC-EEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCCCCcCCeEECCCCCEEE
Confidence 788999876543 4566677789999999999999887532 2379999999988776555555567899999999998
Q ss_pred EEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCC-CCceEEEEcCCCceEEEEeecCCCCceeE
Q 014755 149 ICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSP-LEYKVLIYSPDGRCLLKYQAYESGLGVKS 227 (419)
Q Consensus 149 ~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~v~~ 227 (419)
......+...|++||+++++..+ +..+...+....|+|||+.|++.... ....|+.+|+.+.....+..... ....
T Consensus 259 ~~~~~~g~~~I~~~d~~tg~~~~-lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~~lt~~~~--~~~~ 335 (429)
T PRK03629 259 FALSKTGSLNLYVMDLASGQIRQ-VTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQRITWEGS--QNQD 335 (429)
T ss_pred EEEcCCCCcEEEEEECCCCCEEE-ccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeEEeecCCC--CccC
Confidence 87543333469999998876644 33344567889999999988764321 12367777775444455543333 4667
Q ss_pred EEEccCCCeEEEEEec---CcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccC
Q 014755 228 ISWSPCGQFLAVGSYD---QTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATN 304 (419)
Q Consensus 228 ~~~s~~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (419)
..|+|||++|+..+.+ ..|++||+.+++.. .+...
T Consensus 336 ~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~----------------------------------------- 373 (429)
T PRK03629 336 ADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTDT----------------------------------------- 373 (429)
T ss_pred EEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EeCCC-----------------------------------------
Confidence 8999999999887654 35888898776532 22100
Q ss_pred CceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCC-ceEEEeeccCCCceeecccCCCeeEEE
Q 014755 305 GHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMP-TTLWIWDICRQEPAAILVQKDPIRAAT 383 (419)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~-~~i~iwd~~~~~~~~~~~~~~~v~~~~ 383 (419)
+ ......|||||++|+.++.+.. ..++++++..+....+.+|.+.+..++
T Consensus 374 ---------------------------~--~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~G~~~~~l~~~~~~~~~p~ 424 (429)
T PRK03629 374 ---------------------------F--LDETPSIAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPA 424 (429)
T ss_pred ---------------------------C--CCCCceECCCCCEEEEEEcCCCceEEEEEECCCCCeEECccCCCCcCCcc
Confidence 0 0124689999999998887611 247888886555555556888999999
Q ss_pred eCC
Q 014755 384 WDP 386 (419)
Q Consensus 384 ~s~ 386 (419)
|+|
T Consensus 425 Wsp 427 (429)
T PRK03629 425 WSP 427 (429)
T ss_pred cCC
Confidence 997
No 182
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.86 E-value=9e-19 Score=156.96 Aligned_cols=241 Identities=14% Similarity=0.143 Sum_probs=170.1
Q ss_pred eEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecC--CCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEE
Q 014755 71 MIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDF--QLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAA 148 (419)
Q Consensus 71 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 148 (419)
.|.++|.... ..+.+..+...+..++|+|||+.|+..+.. ...|.+||+.+++...+......+...+|+|||+.|+
T Consensus 183 ~l~~~d~dg~-~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la 261 (435)
T PRK05137 183 RLAIMDQDGA-NVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRELVGNFPGMTFAPRFSPDGRKVV 261 (435)
T ss_pred EEEEECCCCC-CcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEEeecCCCcccCcEECCCCCEEE
Confidence 7888997544 455677888899999999999999988642 2489999999998877666667778999999999887
Q ss_pred EEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEc-CCCCceEEEEcCCCceEEEEeecCCCCceeE
Q 014755 149 ICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWD-SPLEYKVLIYSPDGRCLLKYQAYESGLGVKS 227 (419)
Q Consensus 149 ~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~ 227 (419)
+....++...|++||+.+++. ..+..+........|+|||+.+++.. ......|+++|+++...+.+..... .+..
T Consensus 262 ~~~~~~g~~~Iy~~d~~~~~~-~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~lt~~~~--~~~~ 338 (435)
T PRK05137 262 MSLSQGGNTDIYTMDLRSGTT-TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRRISFGGG--RYST 338 (435)
T ss_pred EEEecCCCceEEEEECCCCce-EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEEeecCCC--cccC
Confidence 665443345789999988765 34555555667899999999888743 2223579999996655555554332 5677
Q ss_pred EEEccCCCeEEEEEec---CcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccC
Q 014755 228 ISWSPCGQFLAVGSYD---QTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATN 304 (419)
Q Consensus 228 ~~~s~~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (419)
+.|+|+|++|+..+.+ ..|.+||+.++.. +.+..
T Consensus 339 ~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt~------------------------------------------ 375 (435)
T PRK05137 339 PVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-RILTS------------------------------------------ 375 (435)
T ss_pred eEECCCCCEEEEEEcCCCceEEEEEECCCCce-EeccC------------------------------------------
Confidence 8999999999887653 2577788654321 22110
Q ss_pred CceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCC----ceEEEeeccCCCceeecccCCCee
Q 014755 305 GHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMP----TTLWIWDICRQEPAAILVQKDPIR 380 (419)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~----~~i~iwd~~~~~~~~~~~~~~~v~ 380 (419)
...+..+.|+|||+.|+..+.+.. ..++++|+..+....+ ...+.+.
T Consensus 376 ----------------------------~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~~~l-~~~~~~~ 426 (435)
T PRK05137 376 ----------------------------GFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNEREV-PTPGDAS 426 (435)
T ss_pred ----------------------------CCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCceEEc-cCCCCcc
Confidence 011345789999999887654311 2688889877665433 3455677
Q ss_pred EEEeCCC
Q 014755 381 AATWDPT 387 (419)
Q Consensus 381 ~~~~s~~ 387 (419)
..+|+|-
T Consensus 427 ~p~Wsp~ 433 (435)
T PRK05137 427 DPAWSPL 433 (435)
T ss_pred CcccCCC
Confidence 8888873
No 183
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.86 E-value=3.5e-20 Score=147.13 Aligned_cols=286 Identities=9% Similarity=0.080 Sum_probs=192.7
Q ss_pred CeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECC--CCCEEEEEecCCCeEEEEEcCCCeEEE---eccCC-C
Q 014755 60 EYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSP--DSRHILTTSDFQLRLTVWSLLNTACVH---VQSPK-H 133 (419)
Q Consensus 60 ~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~~i~iwd~~~~~~~~---~~~~~-~ 133 (419)
..+|++.++ |.|++||..+++.+..+.++...+..++|.. ....+.+++.|+ +|++||++...... ...++ .
T Consensus 41 ~~vav~lSn-gsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG-~Vr~wD~Rs~~e~a~~~~~~~~~~ 118 (376)
T KOG1188|consen 41 TAVAVSLSN-GSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDG-TVRLWDIRSQAESARISWTQQSGT 118 (376)
T ss_pred eeEEEEecC-CeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCC-eEEEEEeecchhhhheeccCCCCC
Confidence 457777766 8999999999999999999999999999977 456788888887 99999999854433 23333 3
Q ss_pred CeeeEEEccCCCEEEEEeecC-CCCeEEEEeccCCeE-EEEE-eccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCC
Q 014755 134 ASKGVAFTQDGKFAAICTRRD-CKDYINLLSCHTWEI-MGVF-AVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDG 210 (419)
Q Consensus 134 ~~~~~~~~~~~~~l~~~~~~~-~~g~v~i~d~~~~~~-~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~ 210 (419)
+-.+++.+..++.++++..-. .+-.|.+||.+..+. ++.+ ..|...|+++.|+|....+++. ++.||-+.+||+.+
T Consensus 119 ~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlS-GSvDGLvnlfD~~~ 197 (376)
T KOG1188|consen 119 PFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLS-GSVDGLVNLFDTKK 197 (376)
T ss_pred cceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEe-ecccceEEeeecCC
Confidence 447777776778888876431 124799999998766 5554 5688999999999987665543 78899999999933
Q ss_pred c--eEEEEeecCCCCceeEEEEccCC-CeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccce
Q 014755 211 R--CLLKYQAYESGLGVKSISWSPCG-QFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMS 287 (419)
Q Consensus 211 ~--~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (419)
. .-..+....+...|..+.|..++ +.|.+-+...+..+|+++.+.+...++.+... +....+
T Consensus 198 d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~--------~~d~r~------- 262 (376)
T KOG1188|consen 198 DNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVS--------ADDLRK------- 262 (376)
T ss_pred CcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccch--------hhhHHh-------
Confidence 2 11111122233369999999877 56888899999999999988865554422110 000000
Q ss_pred eeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeecc--
Q 014755 288 ELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDIC-- 365 (419)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~-- 365 (419)
......+-..-...+...++.++.+ .+...++-+.
T Consensus 263 ------------------------------------------~~~~dY~I~~~~~~~~~~~~l~g~~-~n~~~~~~~~~~ 299 (376)
T KOG1188|consen 263 ------------------------------------------EDNCDYVINEHSPGDKDTCALAGTD-SNKGTIFPLVDT 299 (376)
T ss_pred ------------------------------------------hhhhhheeecccCCCcceEEEeccc-cCceeEEEeeec
Confidence 0000011111112234444444442 1555554333
Q ss_pred -CCC---ceeec-c-cCCCeeEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 366 -RQE---PAAIL-V-QKDPIRAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 366 -~~~---~~~~~-~-~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
++. ....+ + |..-|+++.|...+.++.+|++||.+.+|..+
T Consensus 300 ~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk~~ 346 (376)
T KOG1188|consen 300 SSGSLLTEPAILQGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWKVE 346 (376)
T ss_pred ccccccCccccccCCcHHHHHHHhhhcccceeeccCCCceEEEEecC
Confidence 333 22333 3 77789999999899999999999999999954
No 184
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.86 E-value=9.3e-19 Score=156.89 Aligned_cols=223 Identities=13% Similarity=0.140 Sum_probs=166.1
Q ss_pred eEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEecc--CCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEE
Q 014755 29 RLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYK--RLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHIL 106 (419)
Q Consensus 29 ~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~--~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 106 (419)
.|+++|..+.....+..+...+.+.+|+|||+.|++.+.. +..|++||+.+++. ..+..+.+.+...+|+|||+.|+
T Consensus 183 ~l~~~d~dg~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~-~~l~~~~g~~~~~~~SPDG~~la 261 (435)
T PRK05137 183 RLAIMDQDGANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQR-ELVGNFPGMTFAPRFSPDGRKVV 261 (435)
T ss_pred EEEEECCCCCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcE-EEeecCCCcccCcEECCCCCEEE
Confidence 6889999887777777788899999999999999988643 35899999988865 35556666778899999999887
Q ss_pred EEec-CC-CeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeee
Q 014755 107 TTSD-FQ-LRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIE 184 (419)
Q Consensus 107 ~~~~-~~-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~ 184 (419)
.... ++ ..|++||+.+++...+..+........|+|||+.|++.+...+...|+++|+.+++.. .+..+...+....
T Consensus 262 ~~~~~~g~~~Iy~~d~~~~~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~-~lt~~~~~~~~~~ 340 (435)
T PRK05137 262 MSLSQGGNTDIYTMDLRSGTTTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPR-RISFGGGRYSTPV 340 (435)
T ss_pred EEEecCCCceEEEEECCCCceEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeE-EeecCCCcccCeE
Confidence 6543 22 2588889999888777666666678999999999998876544457999998776554 3433445567789
Q ss_pred ECCCCCeEEEEcCC-CCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEec------CcEEEEEcCCcee
Q 014755 185 WSPDDSAIVIWDSP-LEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYD------QTLRVLNHLTWKT 256 (419)
Q Consensus 185 ~~~~~~~l~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------~~i~v~d~~~~~~ 256 (419)
|+|||+.+++.... ....|.+||+++.....+... . .+..+.|+|||+.|+..+.+ ..++++|+..+..
T Consensus 341 ~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~~~lt~~-~--~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~ 416 (435)
T PRK05137 341 WSPRGDLIAFTKQGGGQFSIGVMKPDGSGERILTSG-F--LVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNE 416 (435)
T ss_pred ECCCCCEEEEEEcCCCceEEEEEECCCCceEeccCC-C--CCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCce
Confidence 99999999875432 235789999855555544432 2 46789999999998876543 2577888765443
No 185
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.86 E-value=5.5e-19 Score=158.11 Aligned_cols=242 Identities=15% Similarity=0.103 Sum_probs=167.8
Q ss_pred CeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCC--CeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEE
Q 014755 70 LMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQ--LRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFA 147 (419)
Q Consensus 70 g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~--~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l 147 (419)
..|.+||.... ..+.+..+...+.+++|+|||+.|++++..+ ..|++||+.+++...+.........+.|+|||+.+
T Consensus 184 ~~l~i~D~~g~-~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~g~~~~~~~SpDG~~l 262 (433)
T PRK04922 184 YALQVADSDGY-NPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVASFRGINGAPSFSPDGRRL 262 (433)
T ss_pred EEEEEECCCCC-CceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEeccCCCCccCceECCCCCEE
Confidence 36899998644 4456777778899999999999999887432 36999999998877765555555789999999988
Q ss_pred EEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcC-CCCceEEEEcCCCceEEEEeecCCCCcee
Q 014755 148 AICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDS-PLEYKVLIYSPDGRCLLKYQAYESGLGVK 226 (419)
Q Consensus 148 ~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~v~ 226 (419)
+.....++...|++||+.+++.. .+..+......++|+|||+.+++... .....|+++++.+.....+..... ...
T Consensus 263 ~~~~s~~g~~~Iy~~d~~~g~~~-~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt~~g~--~~~ 339 (433)
T PRK04922 263 ALTLSRDGNPEIYVMDLGSRQLT-RLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLTFQGN--YNA 339 (433)
T ss_pred EEEEeCCCCceEEEEECCCCCeE-ECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEeecCCC--Ccc
Confidence 76654333357999999887653 44444445567899999998887432 112458888884433444443322 455
Q ss_pred EEEEccCCCeEEEEEecC---cEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCcccccccccc
Q 014755 227 SISWSPCGQFLAVGSYDQ---TLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDAT 303 (419)
Q Consensus 227 ~~~~s~~~~~l~~~~~d~---~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (419)
.++|+|+|++|+..+.++ .|.+||+.+++.. .+.+.
T Consensus 340 ~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt~~---------------------------------------- 378 (433)
T PRK04922 340 RASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLTPG---------------------------------------- 378 (433)
T ss_pred CEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECCCC----------------------------------------
Confidence 789999999998876443 5899998776543 22110
Q ss_pred CCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCC-CCceEEEeeccCCCceeecccCCCeeEE
Q 014755 304 NGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDS-MPTTLWIWDICRQEPAAILVQKDPIRAA 382 (419)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d-~~~~i~iwd~~~~~~~~~~~~~~~v~~~ 382 (419)
.....+.|+|||++++..+.+ ..+.|+++++..+....+..+.+.+..+
T Consensus 379 ------------------------------~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g~~~~~l~~~~g~~~~p 428 (433)
T PRK04922 379 ------------------------------SLDESPSFAPNGSMVLYATREGGRGVLAAVSTDGRVRQRLVSADGEVREP 428 (433)
T ss_pred ------------------------------CCCCCceECCCCCEEEEEEecCCceEEEEEECCCCceEEcccCCCCCCCC
Confidence 012346899999988877653 1256888888655444444466778888
Q ss_pred EeCC
Q 014755 383 TWDP 386 (419)
Q Consensus 383 ~~s~ 386 (419)
+|+|
T Consensus 429 ~wsp 432 (433)
T PRK04922 429 AWSP 432 (433)
T ss_pred ccCC
Confidence 9987
No 186
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.85 E-value=9.6e-20 Score=153.12 Aligned_cols=222 Identities=17% Similarity=0.211 Sum_probs=168.8
Q ss_pred eEEcCCCCEEEEEeCCeEEEEecCCCcEEEEee-cCccee-EEEEec-------CCCeEEEEeccCCeEEEEEccCCcce
Q 014755 13 SCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFS-CLDKIS-YIEWAL-------DSEYILCGLYKRLMIQAWSLTQPEWT 83 (419)
Q Consensus 13 ~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~-~~~~v~-~~~~s~-------~~~~l~~~~~~~g~i~iw~~~~~~~~ 83 (419)
+.|+.+...+.++.|..+.+|.-.+........ ..+.+. .+..-+ ....++.++.| |.+.|.+ ..++..
T Consensus 20 v~w~~~eei~~~~dDh~~~~~~~~~~~s~~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~D-Gkf~il~-k~~rVE 97 (737)
T KOG1524|consen 20 VDWSSNEEIYFVSDDHQIFKWSDVSRDSVEVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSND-GRFVILN-KSARVE 97 (737)
T ss_pred ecccccceEEEeccCceEEEeecccchhhhhhhCCcccCCccccccccccCCCCCcceEEEEcCC-ceEEEec-ccchhh
Confidence 568888877777778887776543332222111 111111 111111 22456666656 8999887 456667
Q ss_pred eeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEe
Q 014755 84 CKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLS 163 (419)
Q Consensus 84 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d 163 (419)
..+..|.+.+.+-.|+|||.-|+++++|+ .|++|.-...-...+.....++.|++|.|+.+.++.+.. +.+.+-.
T Consensus 98 ~sv~AH~~A~~~gRW~~dGtgLlt~GEDG-~iKiWSrsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g----~h~~IKp 172 (737)
T KOG1524|consen 98 RSISAHAAAISSGRWSPDGAGLLTAGEDG-VIKIWSRSGMLRSTVVQNEESIRCARWAPNSNSIVFCQG----GHISIKP 172 (737)
T ss_pred hhhhhhhhhhhhcccCCCCceeeeecCCc-eEEEEeccchHHHHHhhcCceeEEEEECCCCCceEEecC----CeEEEee
Confidence 77889999999999999999999999998 999999655333335667788999999999988887765 5888888
Q ss_pred ccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEec
Q 014755 164 CHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYD 243 (419)
Q Consensus 164 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 243 (419)
+.....+-..+.|++-|.++.|++....++. ++.|-..++||..|..+..-..|++ +|++++|.|+ +.++.++..
T Consensus 173 L~~n~k~i~WkAHDGiiL~~~W~~~s~lI~s--gGED~kfKvWD~~G~~Lf~S~~~ey--~ITSva~npd-~~~~v~S~n 247 (737)
T KOG1524|consen 173 LAANSKIIRWRAHDGLVLSLSWSTQSNIIAS--GGEDFRFKIWDAQGANLFTSAAEEY--AITSVAFNPE-KDYLLWSYN 247 (737)
T ss_pred cccccceeEEeccCcEEEEeecCccccceee--cCCceeEEeecccCcccccCChhcc--ceeeeeeccc-cceeeeeee
Confidence 8877778889999999999999999999998 8889999999999988887777777 8999999999 677777754
Q ss_pred CcEE
Q 014755 244 QTLR 247 (419)
Q Consensus 244 ~~i~ 247 (419)
++|
T Consensus 248 -t~R 250 (737)
T KOG1524|consen 248 -TAR 250 (737)
T ss_pred -eee
Confidence 555
No 187
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.85 E-value=7.2e-19 Score=142.37 Aligned_cols=234 Identities=11% Similarity=0.198 Sum_probs=170.9
Q ss_pred CCCEEEEEe----CCeEEEEec-CCCcEEE----EeecCcceeEEEEecCC-CeEEEEeccCCeEEEEEccCC-------
Q 014755 18 NARYIAVAV----DYRLVVRDA-HSFKVVQ----LFSCLDKISYIEWALDS-EYILCGLYKRLMIQAWSLTQP------- 80 (419)
Q Consensus 18 d~~~la~~~----~~~i~i~~~-~~~~~~~----~~~~~~~v~~~~~s~~~-~~l~~~~~~~g~i~iw~~~~~------- 80 (419)
+.++||+.. .|...+.-+ ++|+.-. .-+|.++|..++|+|-. ..||+|+. |.+|.||.+..+
T Consensus 43 NPkfiAvi~easgGgaf~ViPl~k~Gr~d~~~P~v~GHt~~vLDi~w~PfnD~vIASgSe-D~~v~vW~IPe~~l~~~lt 121 (472)
T KOG0303|consen 43 NPKFVAVIIEASGGGAFLVIPLVKTGRMDASYPLVCGHTAPVLDIDWCPFNDCVIASGSE-DTKVMVWQIPENGLTRDLT 121 (472)
T ss_pred CCceEEEEEecCCCcceeecccccccccCCCCCCccCccccccccccCccCCceeecCCC-CceEEEEECCCcccccCcc
Confidence 557777653 223333322 2343322 33599999999999954 55666665 489999998755
Q ss_pred cceeeeecCCccEeEEEECCCC-CEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeE
Q 014755 81 EWTCKIDEGLAGIAYARWSPDS-RHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYI 159 (419)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v 159 (419)
+.+..+.+|...|..++|+|.- +.|++++.|. .|.+|++.+|+......|+..+.+++|+.||.+|++++.| ..|
T Consensus 122 epvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn-~v~iWnv~tgeali~l~hpd~i~S~sfn~dGs~l~TtckD---Kkv 197 (472)
T KOG0303|consen 122 EPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDN-TVSIWNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCKD---KKV 197 (472)
T ss_pred cceEEEeecceeEEEEeecccchhhHhhccCCc-eEEEEeccCCceeeecCCCCeEEEEEeccCCceeeeeccc---cee
Confidence 4466788999999999999965 4566777777 9999999999988744599999999999999999999998 799
Q ss_pred EEEeccCCeEEEEEeccccc-eeeeeECCCCCeEEE-EcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCe
Q 014755 160 NLLSCHTWEIMGVFAVDTLD-LADIEWSPDDSAIVI-WDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQF 236 (419)
Q Consensus 160 ~i~d~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~-~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 236 (419)
+|||.++++.+..-..|.+. -..+.|-.+|..+.+ ++..++..+-+||. +-+....+........|.-.-|.||.+.
T Consensus 198 Rv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~eP~~~~elDtSnGvl~PFyD~dt~i 277 (472)
T KOG0303|consen 198 RVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIFTTGFSRMSERQIALWDPNNLEEPIALQELDTSNGVLLPFYDPDTSI 277 (472)
T ss_pred EEEcCCCCcEeeecccccCCCcceeEEeccCceeeeccccccccceeccCcccccCcceeEEeccCCceEEeeecCCCCE
Confidence 99999999999888777643 456677778883332 22335688999998 2222222222223336777778898887
Q ss_pred EEEEE-ecCcEEEEEcCCcee
Q 014755 237 LAVGS-YDQTLRVLNHLTWKT 256 (419)
Q Consensus 237 l~~~~-~d~~i~v~d~~~~~~ 256 (419)
++.++ .|+.||.|++....+
T Consensus 278 vYl~GKGD~~IRYyEit~d~P 298 (472)
T KOG0303|consen 278 VYLCGKGDSSIRYFEITNEPP 298 (472)
T ss_pred EEEEecCCcceEEEEecCCCc
Confidence 76655 689999999887653
No 188
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.85 E-value=9.2e-19 Score=132.75 Aligned_cols=245 Identities=15% Similarity=0.181 Sum_probs=186.9
Q ss_pred cEeEEEECCCCCEEEEEecCCCeEEEEEcCC---------CeEE--EeccCCCCeeeEEEccCCCEEEEEeecCCCCeEE
Q 014755 92 GIAYARWSPDSRHILTTSDFQLRLTVWSLLN---------TACV--HVQSPKHASKGVAFTQDGKFAAICTRRDCKDYIN 160 (419)
Q Consensus 92 ~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~---------~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~ 160 (419)
.|.+-+|+|.+++|+++..++ .|.+..+++ ++.. ....|..+++.++|. ..+|++++. |.|+
T Consensus 12 tvf~qa~sp~~~~l~agn~~G-~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~gd----G~V~ 84 (325)
T KOG0649|consen 12 TVFAQAISPSKQYLFAGNLFG-DIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGGD----GLVY 84 (325)
T ss_pred HHHHHhhCCcceEEEEecCCC-eEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeeccC----ceEE
Confidence 456678999999999999887 999998864 2222 257888999999998 446666653 7898
Q ss_pred EEeccCCeEE----------EEEe---ccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCcee
Q 014755 161 LLSCHTWEIM----------GVFA---VDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVK 226 (419)
Q Consensus 161 i~d~~~~~~~----------~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~ 226 (419)
=|..+....- ..+. ..-..|+++...|..+.+++ +..|+.++.||+ +|+..+.+.+|.+ .+.
T Consensus 85 gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~--AgGD~~~y~~dlE~G~i~r~~rGHtD--YvH 160 (325)
T KOG0649|consen 85 GWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILF--AGGDGVIYQVDLEDGRIQREYRGHTD--YVH 160 (325)
T ss_pred EeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEE--ecCCeEEEEEEecCCEEEEEEcCCcc--eee
Confidence 8876542210 0000 11235788889998888887 457999999999 9999999999888 899
Q ss_pred EEEEccCCCeEEEEEecCcEEEEEcCCceeeeeec---ccccccCCCccceeccCCCcccccceeeeccCcccccccccc
Q 014755 227 SISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFM---HLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDAT 303 (419)
Q Consensus 227 ~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (419)
+++-......+++|++||++|+||.+++++++.++ ++...
T Consensus 161 ~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~l------------------------------------- 203 (325)
T KOG0649|consen 161 SVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLL------------------------------------- 203 (325)
T ss_pred eeeecccCcceeecCCCccEEEEeccccceeEEeccccChhhc-------------------------------------
Confidence 99886666689999999999999999999988876 22111
Q ss_pred CCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecccCCCeeEEE
Q 014755 304 NGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILVQKDPIRAAT 383 (419)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~ 383 (419)
.+....+|.+++-+ ..+|++|+. -.+.+|++++.++..++.-..++..+.
T Consensus 204 -------------------------Rp~~g~wigala~~--edWlvCGgG---p~lslwhLrsse~t~vfpipa~v~~v~ 253 (325)
T KOG0649|consen 204 -------------------------RPDWGKWIGALAVN--EDWLVCGGG---PKLSLWHLRSSESTCVFPIPARVHLVD 253 (325)
T ss_pred -------------------------CcccCceeEEEecc--CceEEecCC---CceeEEeccCCCceEEEecccceeEee
Confidence 11234467776654 458999887 689999999999999998889999999
Q ss_pred eCCCCCeEEEEeCCCcEEEeecCCCeEEecCCC
Q 014755 384 WDPTCTRLVLCTGSSHLYMWTPSGAYCVSNPLP 416 (419)
Q Consensus 384 ~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~ 416 (419)
|- ...+++++..+.|.-|.+.+-...++|..
T Consensus 254 F~--~d~vl~~G~g~~v~~~~l~Gvl~a~ip~~ 284 (325)
T KOG0649|consen 254 FV--DDCVLIGGEGNHVQSYTLNGVLQANIPVE 284 (325)
T ss_pred ee--cceEEEeccccceeeeeeccEEEEeccCC
Confidence 95 45578888888999999987666666654
No 189
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.85 E-value=3.8e-19 Score=144.00 Aligned_cols=299 Identities=12% Similarity=0.103 Sum_probs=204.4
Q ss_pred cccccC---eEEcCCCCEEEEEe-CCeEEEEecC------CCcEEEEee--cCcceeEEEEecCCCeEEEEeccCCeEEE
Q 014755 7 YKQTGP---SCFSPNARYIAVAV-DYRLVVRDAH------SFKVVQLFS--CLDKISYIEWALDSEYILCGLYKRLMIQA 74 (419)
Q Consensus 7 ~~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~------~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~~~g~i~i 74 (419)
.+|.++ +.||.++++||+|+ |..+++|+++ +.+++.+.+ |...|.|++|....+.+++|..+ ++|.+
T Consensus 53 ~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~-~~VI~ 131 (609)
T KOG4227|consen 53 REHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERW-GTVIK 131 (609)
T ss_pred hhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCc-ceeEe
Confidence 345554 88999999999999 5569999976 345566555 56889999999988999998876 89999
Q ss_pred EEccCCcceeeeecCC---ccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCe----EEEeccCCCCeeeEEEccCCC-E
Q 014755 75 WSLTQPEWTCKIDEGL---AGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTA----CVHVQSPKHASKGVAFTQDGK-F 146 (419)
Q Consensus 75 w~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~-~ 146 (419)
-|+++.+.+... .|. +.|..+..+|..+.+++.+.++ .|.+||.+... +......+.....+.|+|... +
T Consensus 132 HDiEt~qsi~V~-~~~~~~~~VY~m~~~P~DN~~~~~t~~~-~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~L 209 (609)
T KOG4227|consen 132 HDIETKQSIYVA-NENNNRGDVYHMDQHPTDNTLIVVTRAK-LVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPAL 209 (609)
T ss_pred eecccceeeeee-cccCcccceeecccCCCCceEEEEecCc-eEEEEeccCCCCCCceeeecCCCccceeeeecCCCcee
Confidence 999998876554 343 4799999999989999998887 99999998643 333444455568899999875 4
Q ss_pred EEEEeecCCCCeEEEEeccCCeE-EEE------EeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeec
Q 014755 147 AAICTRRDCKDYINLLSCHTWEI-MGV------FAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAY 219 (419)
Q Consensus 147 l~~~~~~~~~g~v~i~d~~~~~~-~~~------~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~ 219 (419)
|++.+.. +-+.+||.+..+. +.. +......-..+.|+|+|..+.. ......-.+||.-.+.+..++..
T Consensus 210 i~~~~~~---~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~ms--iRR~~~P~~~D~~S~R~~V~k~D 284 (609)
T KOG4227|consen 210 ILVNSET---GGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMS--IRRGKCPLYFDFISQRCFVLKSD 284 (609)
T ss_pred EEecccc---CCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehh--hhccCCCEEeeeecccceeEecc
Confidence 5555543 7799999986432 111 1111223467889999998876 34344456677733222333322
Q ss_pred -CC-----CCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeec---ccccccCCCccceeccCCCcccccceeee
Q 014755 220 -ES-----GLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFM---HLSTVRGPCFPAVFKEVDEPLQLDMSELC 290 (419)
Q Consensus 220 -~~-----~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (419)
.. ...+.+++|-.|- .+++|+.+-.|++|.+.......-+. +..
T Consensus 285 ~N~~GY~N~~T~KS~~F~~D~-~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~-------------------------- 337 (609)
T KOG4227|consen 285 HNPNGYCNIKTIKSMTFIDDY-TVATGSDHWGIHIWKLPRANDSYGFTQIGHDE-------------------------- 337 (609)
T ss_pred CCCCcceeeeeeeeeeeecce-eeeccCcccceEEEecCCCccccCccccCcch--------------------------
Confidence 11 1246677787554 48999999999999986432221111 100
Q ss_pred ccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeecc
Q 014755 291 LNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDIC 365 (419)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~ 365 (419)
...+..+...+.+..+.+|..-++.+.|+|...+|++.+-. +.++||.-.
T Consensus 338 -----------------------~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~H~~~l~SSGVE--~~~KlWS~~ 387 (609)
T KOG4227|consen 338 -----------------------EEMPSEIFIEKELTVLRGHRSVPNQVRFSQHNNLLVSSGVE--NSFKLWSDH 387 (609)
T ss_pred -----------------------hhCchhheecceeEEEecccccccceeecCCcceEeccchh--hheeccccc
Confidence 00111111222333456899999999999999999988877 999999643
No 190
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.85 E-value=2.3e-20 Score=147.34 Aligned_cols=263 Identities=13% Similarity=0.178 Sum_probs=183.6
Q ss_pred eEEcCC----CCEEEEEe-CCeEEEEecCCCcEEE-EeecCcceeEEEEecCC-CeEEEEeccCCeEEEEEccCCcceee
Q 014755 13 SCFSPN----ARYIAVAV-DYRLVVRDAHSFKVVQ-LFSCLDKISYIEWALDS-EYILCGLYKRLMIQAWSLTQPEWTCK 85 (419)
Q Consensus 13 ~~~s~d----~~~la~~~-~~~i~i~~~~~~~~~~-~~~~~~~v~~~~~s~~~-~~l~~~~~~~g~i~iw~~~~~~~~~~ 85 (419)
++|+-| ..+||.++ .|.|+|.|..+++... ..+|...|+.+.|.|+. +++++++.| ..|++|++++..++..
T Consensus 95 csw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD-~svRlwnI~~~~Cv~V 173 (385)
T KOG1034|consen 95 CSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKD-HSVRLWNIQTDVCVAV 173 (385)
T ss_pred EEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCC-ceEEEEeccCCeEEEE
Confidence 666653 34677776 7889999999998877 45699999999999976 566777766 7999999999998877
Q ss_pred e---ecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEE
Q 014755 86 I---DEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINL 161 (419)
Q Consensus 86 ~---~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i 161 (419)
+ .+|.+.|.++.|+++|.++++++.|. ++++|++...+... +. .+..|+|++...-.-. ....+
T Consensus 174 fGG~egHrdeVLSvD~~~~gd~i~ScGmDh-slk~W~l~~~~f~~~lE------~s~~~~~~~t~~pfpt-----~~~~f 241 (385)
T KOG1034|consen 174 FGGVEGHRDEVLSVDFSLDGDRIASCGMDH-SLKLWRLNVKEFKNKLE------LSITYSPNKTTRPFPT-----PKTHF 241 (385)
T ss_pred ecccccccCcEEEEEEcCCCCeeeccCCcc-eEEEEecChhHHhhhhh------hhcccCCCCccCcCCc-----ccccc
Confidence 5 46889999999999999999999998 99999998644322 11 2356666654321111 12333
Q ss_pred EeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-C-Cc-------------eEEEEeecCCCCcee
Q 014755 162 LSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-D-GR-------------CLLKYQAYESGLGVK 226 (419)
Q Consensus 162 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~-~~-------------~~~~~~~~~~~~~v~ 226 (419)
.+.. ....|...|.|+.|- |.+++. -+-++.|..|.+ . ++ .+..+.......+-.
T Consensus 242 p~fs------t~diHrnyVDCvrw~--gd~ilS--kscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfi 311 (385)
T KOG1034|consen 242 PDFS------TTDIHRNYVDCVRWF--GDFILS--KSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFI 311 (385)
T ss_pred cccc------ccccccchHHHHHHH--hhheee--cccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEE
Confidence 3322 234577788888886 456665 445678888876 1 11 122222222211233
Q ss_pred EEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCc
Q 014755 227 SISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGH 306 (419)
Q Consensus 227 ~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (419)
..+|+|-++.||.|...|.|++||++...+...-.+..
T Consensus 312 rf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~~ttl~~------------------------------------------ 349 (385)
T KOG1034|consen 312 RFAFDPWQKMLALGNQSGKVYVWDLDNNEPPKCTTLTH------------------------------------------ 349 (385)
T ss_pred EEeecHHHHHHhhccCCCcEEEEECCCCCCccCceEEe------------------------------------------
Confidence 45667788999999999999999998755431111000
Q ss_pred eEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeecc
Q 014755 307 IKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDIC 365 (419)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~ 365 (419)
.-....|...+||.||.+|+...+| ++|.-||..
T Consensus 350 -----------------------s~~~~tVRQ~sfS~dgs~lv~vcdd--~~Vwrwdrv 383 (385)
T KOG1034|consen 350 -----------------------SKSGSTVRQTSFSRDGSILVLVCDD--GTVWRWDRV 383 (385)
T ss_pred -----------------------ccccceeeeeeecccCcEEEEEeCC--CcEEEEEee
Confidence 0123458899999999999999999 999999864
No 191
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=99.85 E-value=8.3e-18 Score=142.45 Aligned_cols=321 Identities=14% Similarity=0.207 Sum_probs=217.0
Q ss_pred eEEcCCCCEEEEEeCCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEe-----cc----CCeEEEEEccCCcce
Q 014755 13 SCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGL-----YK----RLMIQAWSLTQPEWT 83 (419)
Q Consensus 13 ~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-----~~----~g~i~iw~~~~~~~~ 83 (419)
.++|++|+++|.+.+..++|++..++..+...... .+.++.|||-|.+|.+-- .+ .-.+.+|+++++...
T Consensus 40 ~~~S~~G~lfA~~~~~~v~i~~~~~~~~~lt~~~~-~~~~L~fSP~g~yL~T~e~~~i~~~~~~~~pn~~v~~vet~~~~ 118 (566)
T KOG2315|consen 40 FAYSNNGRLFAYSDNQVVKVFEIATLKVVLCVELK-KTYDLLFSPKGNYLLTWEPWAIYGPKNASNPNVLVYNVETGVQR 118 (566)
T ss_pred EEEcCCCcEEEEEcCCeEEEEEccCCcEEEEeccc-eeeeeeecccccccccccccccccCCCCCCCceeeeeeccceeh
Confidence 78999999999999999999999988755444444 899999999999988631 11 125779999986555
Q ss_pred eeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCC--CEEEEEe--ecCCCCeE
Q 014755 84 CKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDG--KFAAICT--RRDCKDYI 159 (419)
Q Consensus 84 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~--~~~~~g~v 159 (419)
..+......-+++.|++|..+.+-... + .+.+|++.+-+...-..+...+..+.++|.+ ..+|+-. .++....|
T Consensus 119 s~~q~k~Q~~W~~qfs~dEsl~arlv~-n-ev~f~~~~~f~~~~~kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~v 196 (566)
T KOG2315|consen 119 SQIQKKMQNGWVPQFSIDESLAARLVS-N-EVQFYDLGSFKTIQHKLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASV 196 (566)
T ss_pred hheehhhhcCcccccccchhhhhhhhc-c-eEEEEecCCccceeeeeeccceeeEEecCCCCCceEEEEccCCCCCCcEE
Confidence 444433333368999998876554433 2 7999999885555555567788999999884 3333321 22233589
Q ss_pred EEEeccCCeE---EEEEeccccceeeeeECCCCCeEEEE-cCC---------CCceEEEEcCCCceEEEEeecCCCCcee
Q 014755 160 NLLSCHTWEI---MGVFAVDTLDLADIEWSPDDSAIVIW-DSP---------LEYKVLIYSPDGRCLLKYQAYESGLGVK 226 (419)
Q Consensus 160 ~i~d~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~---------~~~~i~~~d~~~~~~~~~~~~~~~~~v~ 226 (419)
+||....... +..-......-..+.|++-|.-|++. ... .+.++++++.+|..... .. ...++|.
T Consensus 197 ri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V-~L-~k~GPVh 274 (566)
T KOG2315|consen 197 RIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSV-PL-LKEGPVH 274 (566)
T ss_pred EEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEE-ec-CCCCCce
Confidence 9998763211 11111122334567888888765541 111 13578888886543322 11 1233899
Q ss_pred EEEEccCCCeEEE--EEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccC
Q 014755 227 SISWSPCGQFLAV--GSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATN 304 (419)
Q Consensus 227 ~~~~s~~~~~l~~--~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (419)
++.|+|+++-+++ |-.-..+.|||++ +.++..+
T Consensus 275 dv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df-------------------------------------------- 309 (566)
T KOG2315|consen 275 DVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDF-------------------------------------------- 309 (566)
T ss_pred EEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeC--------------------------------------------
Confidence 9999999976554 3456689999975 3333333
Q ss_pred CceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecC-CCCceEEEeeccCCCceeecccCCCeeEEE
Q 014755 305 GHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRND-SMPTTLWIWDICRQEPAAILVQKDPIRAAT 383 (419)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~ 383 (419)
..++-+++-|+|.|++++.++- +..|.+-|||+.+.+++....- ..-+-+.
T Consensus 310 ---------------------------~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a-~~tt~~e 361 (566)
T KOG2315|consen 310 ---------------------------PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKA-ANTTVFE 361 (566)
T ss_pred ---------------------------CCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhcccccc-CCceEEE
Confidence 1223467899999999876653 4669999999999877766643 3345589
Q ss_pred eCCCCCeEEEEeC------CCcEEEeecCCCeEE
Q 014755 384 WDPTCTRLVLCTG------SSHLYMWTPSGAYCV 411 (419)
Q Consensus 384 ~s~~~~~l~s~~~------dg~i~vw~~~~~~~~ 411 (419)
|+|||+++++++. |+.++||+..+..+.
T Consensus 362 W~PdGe~flTATTaPRlrvdNg~KiwhytG~~l~ 395 (566)
T KOG2315|consen 362 WSPDGEYFLTATTAPRLRVDNGIKIWHYTGSLLH 395 (566)
T ss_pred EcCCCcEEEEEeccccEEecCCeEEEEecCceee
Confidence 9999999988864 789999999876654
No 192
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.85 E-value=1.2e-18 Score=135.42 Aligned_cols=261 Identities=12% Similarity=0.114 Sum_probs=184.1
Q ss_pred CCeEEEEEccCC--ccee-eeecCCccEeEEEECCCCCEEEE-EecC---C---CeEEEEEcCCCeEE---------E-e
Q 014755 69 RLMIQAWSLTQP--EWTC-KIDEGLAGIAYARWSPDSRHILT-TSDF---Q---LRLTVWSLLNTACV---------H-V 128 (419)
Q Consensus 69 ~g~i~iw~~~~~--~~~~-~~~~~~~~v~~~~~~~~~~~l~~-~~~~---~---~~i~iwd~~~~~~~---------~-~ 128 (419)
++.|.+.+++.. +... .+..+.+.|..++-+|-.+.+++ +-.+ . -.+.||.+...... . +
T Consensus 39 dNqVhll~~d~e~s~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~L 118 (370)
T KOG1007|consen 39 DNQVHLLRLDSEGSELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASL 118 (370)
T ss_pred cceeEEEEecCccchhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcC
Confidence 367888777644 2222 34556788999999996655544 4321 1 14779988752211 1 1
Q ss_pred c-cCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeE-EEEEec-----cccceeeeeECC--CCCeEEEEcCCC
Q 014755 129 Q-SPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEI-MGVFAV-----DTLDLADIEWSP--DDSAIVIWDSPL 199 (419)
Q Consensus 129 ~-~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~-~~~~~~-----~~~~v~~~~~~~--~~~~l~~~~~~~ 199 (419)
. .+-+.+.|+.|.|++..+++... ..|.+|++..+.. +..+.. +.....+-+|+| ++..+++ ..
T Consensus 119 dteavg~i~cvew~Pns~klasm~d----n~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~t---t~ 191 (370)
T KOG1007|consen 119 DTEAVGKINCVEWEPNSDKLASMDD----NNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVAT---TS 191 (370)
T ss_pred CHHHhCceeeEEEcCCCCeeEEecc----CceEEEEcccCcchheeecccccccccceecccccCCCCccceEEE---eC
Confidence 1 23347799999999999988774 5999999987655 333322 345577888998 6777776 45
Q ss_pred CceEEEEcC-CCceEEEE-eecCCCCceeEEEEccCCC-eEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceec
Q 014755 200 EYKVLIYSP-DGRCLLKY-QAYESGLGVKSISWSPCGQ-FLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFK 276 (419)
Q Consensus 200 ~~~i~~~d~-~~~~~~~~-~~~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (419)
++++..||+ +.++...+ ..|.+ .|..+.|+|+.+ +|++++.||.|++||.+.-+
T Consensus 192 d~tl~~~D~RT~~~~~sI~dAHgq--~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk--------------------- 248 (370)
T KOG1007|consen 192 DSTLQFWDLRTMKKNNSIEDAHGQ--RVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTK--------------------- 248 (370)
T ss_pred CCcEEEEEccchhhhcchhhhhcc--eeeeccCCCCceEEEEEcCCCccEEEEeccCCC---------------------
Confidence 899999999 44444433 34444 799999999876 67889999999999986421
Q ss_pred cCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccC-CeEEEEecCCC
Q 014755 277 EVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSD-SQYICTRNDSM 355 (419)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~~~~~d~ 355 (419)
.|..++++|..+|.++.|.|. .+++.+|+.|
T Consensus 249 -----------------------------------------------~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SD- 280 (370)
T KOG1007|consen 249 -----------------------------------------------FPVQELPGHSHWVWAVRFNPEHDQLILSGGSD- 280 (370)
T ss_pred -----------------------------------------------ccccccCCCceEEEEEEecCccceEEEecCCC-
Confidence 233446679999999999995 5678888888
Q ss_pred CceEEEeeccC------------------------------CCceeecccCCCeeEEEeCCCCC-eEEEEeCCCcEEEee
Q 014755 356 PTTLWIWDICR------------------------------QEPAAILVQKDPIRAATWDPTCT-RLVLCTGSSHLYMWT 404 (419)
Q Consensus 356 ~~~i~iwd~~~------------------------------~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~vw~ 404 (419)
..|.+|...+ |.+...-.|...|++++||.-.. .+|+-+.||++.|=+
T Consensus 281 -s~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~ 359 (370)
T KOG1007|consen 281 -SAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGRVIISS 359 (370)
T ss_pred -ceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEeccCceEEeec
Confidence 9999987532 11112225899999999998777 568889999999877
Q ss_pred cCCC
Q 014755 405 PSGA 408 (419)
Q Consensus 405 ~~~~ 408 (419)
+...
T Consensus 360 V~r~ 363 (370)
T KOG1007|consen 360 VPRF 363 (370)
T ss_pred CChh
Confidence 7643
No 193
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.85 E-value=1.4e-18 Score=155.55 Aligned_cols=220 Identities=15% Similarity=0.138 Sum_probs=158.1
Q ss_pred eEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccC--CeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEE
Q 014755 29 RLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKR--LMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHIL 106 (419)
Q Consensus 29 ~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~--g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 106 (419)
.|++||..+.....+..+...+.+++|+|||+.|++.+.++ ..|++||+.+++.. .+....+...+++|+|||+.|+
T Consensus 185 ~l~i~D~~g~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~-~l~~~~g~~~~~~~SpDG~~l~ 263 (433)
T PRK04922 185 ALQVADSDGYNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRE-LVASFRGINGAPSFSPDGRRLA 263 (433)
T ss_pred EEEEECCCCCCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEE-EeccCCCCccCceECCCCCEEE
Confidence 58999998777777777888899999999999999887442 36999999887653 4444445556789999999887
Q ss_pred EEe-cCC-CeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeee
Q 014755 107 TTS-DFQ-LRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIE 184 (419)
Q Consensus 107 ~~~-~~~-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~ 184 (419)
... .++ ..|++||+.+++...+..+.......+|+|||+.|++++...+...|+++|+.+++..+ +..+......++
T Consensus 264 ~~~s~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~-lt~~g~~~~~~~ 342 (433)
T PRK04922 264 LTLSRDGNPEIYVMDLGSRQLTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAER-LTFQGNYNARAS 342 (433)
T ss_pred EEEeCCCCceEEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEE-eecCCCCccCEE
Confidence 553 322 26999999998877766555555789999999999988754333468888887766433 323334455789
Q ss_pred ECCCCCeEEEEcCC-CCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEec---CcEEEEEcCC
Q 014755 185 WSPDDSAIVIWDSP-LEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYD---QTLRVLNHLT 253 (419)
Q Consensus 185 ~~~~~~~l~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---~~i~v~d~~~ 253 (419)
|+|+|+.+++.... ....|++||+.+.....+... . ....+.|+|||++|+..+.+ +.|.++++..
T Consensus 343 ~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~~Lt~~-~--~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g 412 (433)
T PRK04922 343 VSPDGKKIAMVHGSGGQYRIAVMDLSTGSVRTLTPG-S--LDESPSFAPNGSMVLYATREGGRGVLAAVSTDG 412 (433)
T ss_pred ECCCCCEEEEEECCCCceeEEEEECCCCCeEECCCC-C--CCCCceECCCCCEEEEEEecCCceEEEEEECCC
Confidence 99999999875432 124799999943333444322 1 34567999999998887764 3577777743
No 194
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.84 E-value=4e-18 Score=151.97 Aligned_cols=241 Identities=19% Similarity=0.118 Sum_probs=161.1
Q ss_pred eEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCC--CeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEE
Q 014755 71 MIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQ--LRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAA 148 (419)
Q Consensus 71 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~--~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 148 (419)
.|.++|.. +...+.+..+...+.+.+|+|||+.|++.+..+ ..|.+||+.+++...+..........+|+|||+.|+
T Consensus 177 ~L~~~D~d-G~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la 255 (427)
T PRK02889 177 QLQISDAD-GQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFKGSNSAPAWSPDGRTLA 255 (427)
T ss_pred EEEEECCC-CCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEE
Confidence 57777764 444556667778899999999999999887432 369999999998777655556667899999999988
Q ss_pred EEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcC-CCCceEEEEcCCCceEEEEeecCCCCceeE
Q 014755 149 ICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDS-PLEYKVLIYSPDGRCLLKYQAYESGLGVKS 227 (419)
Q Consensus 149 ~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~ 227 (419)
.....++...|+++|+..++ ...+..+........|+|||+.+++... .....|+.++..+.....+..... ....
T Consensus 256 ~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt~~g~--~~~~ 332 (427)
T PRK02889 256 VALSRDGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVTFTGS--YNTS 332 (427)
T ss_pred EEEccCCCceEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEecCCC--CcCc
Confidence 75543322356666666554 3445445555677899999998886422 122345555654443444433222 3456
Q ss_pred EEEccCCCeEEEEEecC---cEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccC
Q 014755 228 ISWSPCGQFLAVGSYDQ---TLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATN 304 (419)
Q Consensus 228 ~~~s~~~~~l~~~~~d~---~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (419)
.+|+|||++|+..+.++ .|.+||+.+++... +..
T Consensus 333 ~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~-lt~------------------------------------------ 369 (427)
T PRK02889 333 PRISPDGKLLAYISRVGGAFKLYVQDLATGQVTA-LTD------------------------------------------ 369 (427)
T ss_pred eEECCCCCEEEEEEccCCcEEEEEEECCCCCeEE-ccC------------------------------------------
Confidence 89999999999877654 59999988765422 110
Q ss_pred CceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCC-CceEEEeeccCCCceeec-ccCCCeeEE
Q 014755 305 GHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSM-PTTLWIWDICRQEPAAIL-VQKDPIRAA 382 (419)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~-~~~i~iwd~~~~~~~~~~-~~~~~v~~~ 382 (419)
......+.|+|||+.|+..+.+. ...+++.++. ++....+ .+.+.+...
T Consensus 370 ----------------------------~~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~~-g~~~~~l~~~~g~~~~p 420 (427)
T PRK02889 370 ----------------------------TTRDESPSFAPNGRYILYATQQGGRSVLAAVSSD-GRIKQRLSVQGGDVREP 420 (427)
T ss_pred ----------------------------CCCccCceECCCCCEEEEEEecCCCEEEEEEECC-CCceEEeecCCCCCCCC
Confidence 00123568999999998887541 1246666774 5544444 467788889
Q ss_pred EeCCC
Q 014755 383 TWDPT 387 (419)
Q Consensus 383 ~~s~~ 387 (419)
+|+|-
T Consensus 421 ~wsp~ 425 (427)
T PRK02889 421 SWGPF 425 (427)
T ss_pred ccCCC
Confidence 99874
No 195
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.84 E-value=1.3e-18 Score=135.30 Aligned_cols=288 Identities=14% Similarity=0.206 Sum_probs=192.2
Q ss_pred CCeEEEEecCC--CcEEE--EeecCcceeEEEEecCCCeEE-EEecc---C---CeEEEEEccCC---------cceeee
Q 014755 27 DYRLVVRDAHS--FKVVQ--LFSCLDKISYIEWALDSEYIL-CGLYK---R---LMIQAWSLTQP---------EWTCKI 86 (419)
Q Consensus 27 ~~~i~i~~~~~--~~~~~--~~~~~~~v~~~~~s~~~~~l~-~~~~~---~---g~i~iw~~~~~---------~~~~~~ 86 (419)
++.|.+.+++. +.+.. ++.|.+.|..++-+|-.+.++ ++-.+ . ..+.||.+... +++..+
T Consensus 39 dNqVhll~~d~e~s~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~L 118 (370)
T KOG1007|consen 39 DNQVHLLRLDSEGSELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASL 118 (370)
T ss_pred cceeEEEEecCccchhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcC
Confidence 56677765543 33332 345778999999999555544 44321 1 14689998643 223333
Q ss_pred e-cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeE-EE-ec-----cCCCCeeeEEEcc--CCCEEEEEeecCCC
Q 014755 87 D-EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTAC-VH-VQ-----SPKHASKGVAFTQ--DGKFAAICTRRDCK 156 (419)
Q Consensus 87 ~-~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~-~~-~~-----~~~~~~~~~~~~~--~~~~l~~~~~~~~~ 156 (419)
. .+-+.|.|+.|.|++..+++..+ . .|.+|++..+.. +. +. .+....++-+|+| +++.+++.+.
T Consensus 119 dteavg~i~cvew~Pns~klasm~d-n-~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~d---- 192 (370)
T KOG1007|consen 119 DTEAVGKINCVEWEPNSDKLASMDD-N-NIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTSD---- 192 (370)
T ss_pred CHHHhCceeeEEEcCCCCeeEEecc-C-ceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeCC----
Confidence 3 34568999999999999998874 4 799999997655 22 11 1233457888988 7788888775
Q ss_pred CeEEEEeccCCeEEEEE-eccccceeeeeECCCCCeEEEEcCCCCceEEEEcC--CCceEEEEeecCCCCceeEEEEccC
Q 014755 157 DYINLLSCHTWEIMGVF-AVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP--DGRCLLKYQAYESGLGVKSISWSPC 233 (419)
Q Consensus 157 g~v~i~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~--~~~~~~~~~~~~~~~~v~~~~~s~~ 233 (419)
++++.||+++.+....+ ..|...+..+.|+|+.+.+++. ++.|+.|++||. +..+++.+..|.| .|.++.|+|.
T Consensus 193 ~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt-~gDdgyvriWD~R~tk~pv~el~~HsH--WvW~VRfn~~ 269 (370)
T KOG1007|consen 193 STLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVT-CGDDGYVRIWDTRKTKFPVQELPGHSH--WVWAVRFNPE 269 (370)
T ss_pred CcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEE-cCCCccEEEEeccCCCccccccCCCce--EEEEEEecCc
Confidence 69999999987665554 3466779999999999887764 567899999999 6677888888888 9999999995
Q ss_pred -CCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEE
Q 014755 234 -GQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYE 312 (419)
Q Consensus 234 -~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (419)
.++|++++.|..|.+|...+-..-..+........ + ++. +
T Consensus 270 hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese------~-----e~~----------------------------d 310 (370)
T KOG1007|consen 270 HDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESE------S-----EDE----------------------------D 310 (370)
T ss_pred cceEEEecCCCceeEEEecccccccccccccccccc------C-----cch----------------------------h
Confidence 46889999999999998654322222211000000 0 000 0
Q ss_pred eccCCCCCCCCCCCCCCCCCCcceEEEEEccCCe-EEEEecCCCCceEEEeecc
Q 014755 313 VMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQ-YICTRNDSMPTTLWIWDIC 365 (419)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~d~~~~i~iwd~~ 365 (419)
. ....+.-.-..+..+..|...|.+++||.-.. ++|+-+.| |.+.|=.+.
T Consensus 311 s-eer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASLSYD--GRviIs~V~ 361 (370)
T KOG1007|consen 311 S-EERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASLSYD--GRVIISSVP 361 (370)
T ss_pred h-HHhcccccccccccccccccceEEEeeccCCCeeEEEeccC--ceEEeecCC
Confidence 0 00000001112344567999999999987555 46677888 998886554
No 196
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.84 E-value=2.5e-18 Score=133.79 Aligned_cols=231 Identities=16% Similarity=0.267 Sum_probs=169.8
Q ss_pred eEEc--CC-CCEEEEEe-----CCeEEEE--ecCCCcEEE--EeecCcceeEEEEecCC-----CeEEEEeccCCeEEEE
Q 014755 13 SCFS--PN-ARYIAVAV-----DYRLVVR--DAHSFKVVQ--LFSCLDKISYIEWALDS-----EYILCGLYKRLMIQAW 75 (419)
Q Consensus 13 ~~~s--~d-~~~la~~~-----~~~i~i~--~~~~~~~~~--~~~~~~~v~~~~~s~~~-----~~l~~~~~~~g~i~iw 75 (419)
+.|| |+ +-+||.|+ .++|.|. |-++++.+. .+.|.-+++.+.|.|+. ++||+.+ | .+|+|
T Consensus 50 ~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdlLATs~-D--~LRlW 126 (364)
T KOG0290|consen 50 MNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDLLATSS-D--FLRLW 126 (364)
T ss_pred eccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcchhhccc-C--eEEEE
Confidence 4566 33 45788886 2456654 455666665 35799999999999986 3566654 3 79999
Q ss_pred EccCCccee----ee-----ecCCccEeEEEECC-CCCEEEEEecCCCeEEEEEcCCCeE----EEeccCCCCeeeEEEc
Q 014755 76 SLTQPEWTC----KI-----DEGLAGIAYARWSP-DSRHILTTSDFQLRLTVWSLLNTAC----VHVQSPKHASKGVAFT 141 (419)
Q Consensus 76 ~~~~~~~~~----~~-----~~~~~~v~~~~~~~-~~~~l~~~~~~~~~i~iwd~~~~~~----~~~~~~~~~~~~~~~~ 141 (419)
.+...+... .+ ..+..++++..|+. +-+++.+++-|. +..|||++++.. .++..|..+|..++|.
T Consensus 127 ri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDT-TCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~ 205 (364)
T KOG0290|consen 127 RIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDT-TCTIWDIETGVSGTVKTQLIAHDKEVYDIAFL 205 (364)
T ss_pred eccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccC-eEEEEEEeeccccceeeEEEecCcceeEEEec
Confidence 987422111 11 23456899999988 567777888887 999999999733 2388899999999999
Q ss_pred cCC-CEEEEEeecCCCCeEEEEeccCCeEEEEEec---cccceeeeeECCCCC-eEEEEcCCCCceEEEEcC--CCceEE
Q 014755 142 QDG-KFAAICTRRDCKDYINLLSCHTWEIMGVFAV---DTLDLADIEWSPDDS-AIVIWDSPLEYKVLIYSP--DGRCLL 214 (419)
Q Consensus 142 ~~~-~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~---~~~~v~~~~~~~~~~-~l~~~~~~~~~~i~~~d~--~~~~~~ 214 (419)
..+ +.+++++.| |.|+++|++..+--..+.. ...+...++|+++.. +++++ ......|.+.|+ ....+.
T Consensus 206 ~~s~~~FASvgaD---GSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf-~~dS~~V~iLDiR~P~tpva 281 (364)
T KOG0290|consen 206 KGSRDVFASVGAD---GSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATF-AMDSNKVVILDIRVPCTPVA 281 (364)
T ss_pred cCccceEEEecCC---CcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhh-hcCCceEEEEEecCCCccee
Confidence 977 677888876 8999999998544333322 235678889988664 44443 344578999998 667777
Q ss_pred EEeecCCCCceeEEEEccCC-CeEEEEEecCcEEEEEcCC
Q 014755 215 KYQAYESGLGVKSISWSPCG-QFLAVGSYDQTLRVLNHLT 253 (419)
Q Consensus 215 ~~~~~~~~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~~ 253 (419)
.++.|.. .|++++|.|.. ..|++++.|..+.+||+.+
T Consensus 282 ~L~~H~a--~VNgIaWaPhS~~hictaGDD~qaliWDl~q 319 (364)
T KOG0290|consen 282 RLRNHQA--SVNGIAWAPHSSSHICTAGDDCQALIWDLQQ 319 (364)
T ss_pred hhhcCcc--cccceEecCCCCceeeecCCcceEEEEeccc
Confidence 8887766 89999999965 6899999999999999865
No 197
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.84 E-value=5.8e-17 Score=130.45 Aligned_cols=233 Identities=13% Similarity=0.177 Sum_probs=179.8
Q ss_pred eEEcCCCCEEEEEeCCeEEEEecCCCcEE-EEeecCcceeEEEEecCCCeEEEEeccCC-eEEEEEccCCcceeeeecCC
Q 014755 13 SCFSPNARYIAVAVDYRLVVRDAHSFKVV-QLFSCLDKISYIEWALDSEYILCGLYKRL-MIQAWSLTQPEWTCKIDEGL 90 (419)
Q Consensus 13 ~~~s~d~~~la~~~~~~i~i~~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~~~~~~~g-~i~iw~~~~~~~~~~~~~~~ 90 (419)
+.|+.|...|..|+.+..++|+.+..... ........|--+-|+ ..++|..+.+++ .+++.+...+..+..+. ..
T Consensus 11 ~~~Nqd~~~lsvGs~~Gyk~~~~~~~~k~~~~~~~~~~IvEmLFS--SSLvaiV~~~qpr~Lkv~~~Kk~~~ICe~~-fp 87 (391)
T KOG2110|consen 11 IGFNQDSTLLSVGSKDGYKIFSCSPFEKCFSKDTEGVSIVEMLFS--SSLVAIVSIKQPRKLKVVHFKKKTTICEIF-FP 87 (391)
T ss_pred eeeccceeEEEccCCCceeEEecCchHHhhcccCCCeEEEEeecc--cceeEEEecCCCceEEEEEcccCceEEEEe-cC
Confidence 56899999999999888899988765431 111223345566666 457776665533 58899988887777764 45
Q ss_pred ccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-ec---cCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC
Q 014755 91 AGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQ---SPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT 166 (419)
Q Consensus 91 ~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~ 166 (419)
.+|.++.++. ++|+++-.+ .|+|||+++.+.+. +. .+...+.++++++.+.+++.-+... .|.|.+||..+
T Consensus 88 t~IL~VrmNr--~RLvV~Lee--~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t-~GdV~l~d~~n 162 (391)
T KOG2110|consen 88 TSILAVRMNR--KRLVVCLEE--SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTT-SGDVVLFDTIN 162 (391)
T ss_pred CceEEEEEcc--ceEEEEEcc--cEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCC-CceEEEEEccc
Confidence 6788888864 567777665 59999999998887 32 3444556666677777888754432 58999999999
Q ss_pred CeEEEEEeccccceeeeeECCCCCeEEEEcCCCCc-eEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecC
Q 014755 167 WEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEY-KVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQ 244 (419)
Q Consensus 167 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~-~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~ 244 (419)
-+.+..+..|++.+.+++|+++|.+|++ ++..| -|++|.. +|+.+..+........|.+++|+|++++|++.+..+
T Consensus 163 l~~v~~I~aH~~~lAalafs~~G~llAT--ASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~Te 240 (391)
T KOG2110|consen 163 LQPVNTINAHKGPLAALAFSPDGTLLAT--ASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTE 240 (391)
T ss_pred ceeeeEEEecCCceeEEEECCCCCEEEE--eccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCC
Confidence 9999999999999999999999999999 45455 4799999 999999887655555789999999999999999999
Q ss_pred cEEEEEcCCce
Q 014755 245 TLRVLNHLTWK 255 (419)
Q Consensus 245 ~i~v~d~~~~~ 255 (419)
+|.+|.+....
T Consensus 241 TVHiFKL~~~~ 251 (391)
T KOG2110|consen 241 TVHIFKLEKVS 251 (391)
T ss_pred eEEEEEecccc
Confidence 99999987543
No 198
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=99.84 E-value=1.9e-19 Score=137.98 Aligned_cols=271 Identities=12% Similarity=0.138 Sum_probs=175.9
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEee--cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecC
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFS--CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEG 89 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~ 89 (419)
+.|..+++ |.+|. .|-|.+|++.+...+..+. |...|+.+.--|++ .|.+-+.| +.+.+|++..+..+.. |
T Consensus 20 ~~fqa~~r-L~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~d-~l~tqgRd-~~L~lw~ia~s~~i~i---~ 93 (323)
T KOG0322|consen 20 VLFQANER-LMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPND-SLDTQGRD-PLLILWTIAYSAFISI---H 93 (323)
T ss_pred hhhccchh-hhcccccceEEEEEeecCccchhhhhhccceeeceeecCCc-chhhcCCC-ceEEEEEccCcceEEE---e
Confidence 56777776 55554 7889999999988777665 67789999999984 56666656 8999999987654322 2
Q ss_pred CccEeEEEECC-----CCC----EEEEEecCCCeEEEEEcCCCeEEEec-----cCCCCeeeEEEcc-CC-CEEEEEeec
Q 014755 90 LAGIAYARWSP-----DSR----HILTTSDFQLRLTVWSLLNTACVHVQ-----SPKHASKGVAFTQ-DG-KFAAICTRR 153 (419)
Q Consensus 90 ~~~v~~~~~~~-----~~~----~l~~~~~~~~~i~iwd~~~~~~~~~~-----~~~~~~~~~~~~~-~~-~~l~~~~~~ 153 (419)
.-.+.++.|.+ +++ .+++-++....+.+-|......+.+. ...+.+.+..+.. ++ ..++.++..
T Consensus 94 Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyE 173 (323)
T KOG0322|consen 94 SIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTFLLLAGYE 173 (323)
T ss_pred eeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeeccccccceEEEEEecc
Confidence 23334444433 221 12222221111222222222222211 1223345555432 23 444555544
Q ss_pred CCCCeEEEEeccCCeEEEE----------EeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC---CCceEEEEeecC
Q 014755 154 DCKDYINLLSCHTWEIMGV----------FAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP---DGRCLLKYQAYE 220 (419)
Q Consensus 154 ~~~g~v~i~d~~~~~~~~~----------~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~---~~~~~~~~~~~~ 220 (419)
.|.+.+||+.++..+.. ...|..++.++.+.+.-..=+. ++.+..+..|++ .+.+........
T Consensus 174 --sghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGis--gga~dkl~~~Sl~~s~gslq~~~e~~l 249 (323)
T KOG0322|consen 174 --SGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGIS--GGADDKLVMYSLNHSTGSLQIRKEITL 249 (323)
T ss_pred --CCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcC--CCccccceeeeeccccCcccccceEEe
Confidence 38999999998744333 3447788888888764433333 555667888887 233222111111
Q ss_pred CCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccc
Q 014755 221 SGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNS 300 (419)
Q Consensus 221 ~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (419)
....+..+.+-||++.+|+++.|+.||||..++..++..+.
T Consensus 250 knpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLk--------------------------------------- 290 (323)
T KOG0322|consen 250 KNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLK--------------------------------------- 290 (323)
T ss_pred cCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhh---------------------------------------
Confidence 12268999999999999999999999999999988877654
Q ss_pred cccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeec
Q 014755 301 DATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDI 364 (419)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~ 364 (419)
-|...|++++|+|+..++|+++.| ++|.+|++
T Consensus 291 ------------------------------yHsagvn~vAfspd~~lmAaaskD--~rISLWkL 322 (323)
T KOG0322|consen 291 ------------------------------YHSAGVNAVAFSPDCELMAAASKD--ARISLWKL 322 (323)
T ss_pred ------------------------------hhhcceeEEEeCCCCchhhhccCC--ceEEeeec
Confidence 367789999999999999999999 99999986
No 199
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=99.83 E-value=1.5e-17 Score=131.79 Aligned_cols=307 Identities=18% Similarity=0.232 Sum_probs=204.6
Q ss_pred eEEcCCCCEEEEEe--CCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecC
Q 014755 13 SCFSPNARYIAVAV--DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEG 89 (419)
Q Consensus 13 ~~~s~d~~~la~~~--~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~ 89 (419)
+.|+.|..++..+. ++.|.+|++...+-...+. ...++.+++|||||+.++..+.-+-.|.+|.+.+.+.. .+.-.
T Consensus 54 ieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~-~~~~p 132 (447)
T KOG4497|consen 54 IEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGY-LLPHP 132 (447)
T ss_pred eeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeE-Eeccc
Confidence 67899998888875 6789999998877666555 67889999999999887766655579999999887643 33333
Q ss_pred CccEeEEEECCCCCEEEEEecCC-----------------------------------CeEEEEEcCCCeEEEeccCCCC
Q 014755 90 LAGIAYARWSPDSRHILTTSDFQ-----------------------------------LRLTVWSLLNTACVHVQSPKHA 134 (419)
Q Consensus 90 ~~~v~~~~~~~~~~~l~~~~~~~-----------------------------------~~i~iwd~~~~~~~~~~~~~~~ 134 (419)
+..+..++|+|||++.+.+++.+ ..+.+||---...+......-+
T Consensus 133 K~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe~~lG 212 (447)
T KOG4497|consen 133 KTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYERGLG 212 (447)
T ss_pred ccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchhhheeeeeeeccc
Confidence 45578899999999888765432 2334444322222222233456
Q ss_pred eeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEec----c---------------ccceeeeeECCCCCeEEEE
Q 014755 135 SKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAV----D---------------TLDLADIEWSPDDSAIVIW 195 (419)
Q Consensus 135 ~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~----~---------------~~~v~~~~~~~~~~~l~~~ 195 (419)
+..++|+|.+++|++|+.| +.+++.+--+++....+-. | .....++.|.|..--.-.+
T Consensus 213 ~k~v~wsP~~qflavGsyD---~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~ 289 (447)
T KOG4497|consen 213 LKFVEWSPCNQFLAVGSYD---QMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIW 289 (447)
T ss_pred eeEEEeccccceEEeeccc---hhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCcc
Confidence 7889999999999999997 7888887766655443321 0 0112455555543221111
Q ss_pred cCCCCceEEEEcC--CCceEEEEeecC----CCCceeEEEEccCCCeEEEEEec--CcEEEEEcCCceeeeeeccccccc
Q 014755 196 DSPLEYKVLIYSP--DGRCLLKYQAYE----SGLGVKSISWSPCGQFLAVGSYD--QTLRVLNHLTWKTFAEFMHLSTVR 267 (419)
Q Consensus 196 ~~~~~~~i~~~d~--~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~d--~~i~v~d~~~~~~~~~~~~~~~~~ 267 (419)
..+ -.+|.. ....++.+.... ....+.-++|++|..++++-... +.+.+||++..+....+.
T Consensus 290 ~~s----e~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLi------ 359 (447)
T KOG4497|consen 290 EES----ETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLI------ 359 (447)
T ss_pred ccc----hhhhhhhhcceeeecccCCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhh------
Confidence 100 012222 112222222111 11356779999999999887643 579999988755443332
Q ss_pred CCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeE
Q 014755 268 GPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQY 347 (419)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 347 (419)
...+|....|.|....
T Consensus 360 ----------------------------------------------------------------Qk~piraf~WdP~~pr 375 (447)
T KOG4497|consen 360 ----------------------------------------------------------------QKHPIRAFEWDPGRPR 375 (447)
T ss_pred ----------------------------------------------------------------hccceeEEEeCCCCce
Confidence 2334788999999888
Q ss_pred EEEecCCCCceEEEeeccCCCceeecccCCCeeEEEeCCCCCeEEEEeCCCc
Q 014755 348 ICTRNDSMPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCTRLVLCTGSSH 399 (419)
Q Consensus 348 l~~~~~d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~ 399 (419)
|+..... ..+++|.......+...+..-.|..+.|..+|..++..+.|.-
T Consensus 376 L~vctg~--srLY~W~psg~~~V~vP~~GF~i~~l~W~~~g~~i~l~~kDaf 425 (447)
T KOG4497|consen 376 LVVCTGK--SRLYFWAPSGPRVVGVPKKGFNIQKLQWLQPGEFIVLCGKDAF 425 (447)
T ss_pred EEEEcCC--ceEEEEcCCCceEEecCCCCceeeeEEecCCCcEEEEEcCCce
Confidence 7777665 7899999877655555556678999999999999999998863
No 200
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=99.83 E-value=9.7e-18 Score=141.79 Aligned_cols=322 Identities=14% Similarity=0.199 Sum_probs=225.0
Q ss_pred eEEcCCCCEEEEEeCCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEecc----------CCeEEEEEccCCcc
Q 014755 13 SCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYK----------RLMIQAWSLTQPEW 82 (419)
Q Consensus 13 ~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~----------~g~i~iw~~~~~~~ 82 (419)
+.|||-|.||++-....|.+|--++....+.+.|.+ |.-+.|||..+||++-+.. ...+.|||+.+|..
T Consensus 216 v~wSP~GTYL~t~Hk~GI~lWGG~~f~r~~RF~Hp~-Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~l 294 (698)
T KOG2314|consen 216 VRWSPKGTYLVTFHKQGIALWGGESFDRIQRFYHPG-VQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLL 294 (698)
T ss_pred EEecCCceEEEEEeccceeeecCccHHHHHhccCCC-ceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccch
Confidence 899999999999998889999877777777888875 8999999999999986532 24799999999988
Q ss_pred eeeeecCCc--c-EeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecC--CC
Q 014755 83 TCKIDEGLA--G-IAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRD--CK 156 (419)
Q Consensus 83 ~~~~~~~~~--~-v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~ 156 (419)
.+.+..... . -.-..||.|++++|-...+ .|.||+..+-.++. -......|....|+|.+..||.-.... ..
T Consensus 295 krsF~~~~~~~~~WP~frWS~DdKy~Arm~~~--sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYwtpe~~~~p 372 (698)
T KOG2314|consen 295 KRSFPVIKSPYLKWPIFRWSHDDKYFARMTGN--SISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYWTPETNNIP 372 (698)
T ss_pred hcceeccCCCccccceEEeccCCceeEEeccc--eEEEEecCceeeecccccCCccccCcccCCCcceEEEEcccccCCc
Confidence 777655322 2 2357899999999987764 69999988744443 233446678999999999998765431 12
Q ss_pred CeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEE-cCCC----C---ceEEEEcCCCc--eEEEEeecCCCCcee
Q 014755 157 DYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIW-DSPL----E---YKVLIYSPDGR--CLLKYQAYESGLGVK 226 (419)
Q Consensus 157 g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~~~----~---~~i~~~d~~~~--~~~~~~~~~~~~~v~ 226 (419)
-.+.+..+.+++.++....++-.=..+-|-.+|.+|++- +... . ..+.++.+..+ ++..+.... .|.
T Consensus 373 arvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~velke---~vi 449 (698)
T KOG2314|consen 373 ARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVELKE---SVI 449 (698)
T ss_pred ceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceeeecch---hee
Confidence 367888888888888776665555667888899998862 1111 1 23445555222 223333222 689
Q ss_pred EEEEccCCCeEEEEEec---CcEEEEEcCCc-e---eeeeecccccccCCCccceeccCCCcccccceeeeccCcccccc
Q 014755 227 SISWSPCGQFLAVGSYD---QTLRVLNHLTW-K---TFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGN 299 (419)
Q Consensus 227 ~~~~s~~~~~l~~~~~d---~~i~v~d~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (419)
..+|-|.|..+++-+.. .++.+|.+++. . .+..+
T Consensus 450 ~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~--------------------------------------- 490 (698)
T KOG2314|consen 450 AFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKEL--------------------------------------- 490 (698)
T ss_pred eeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhh---------------------------------------
Confidence 99999999877766543 46788877631 1 11111
Q ss_pred ccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCC-CCceEEEeeccCCCceeec-ccCC
Q 014755 300 SDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDS-MPTTLWIWDICRQEPAAIL-VQKD 377 (419)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d-~~~~i~iwd~~~~~~~~~~-~~~~ 377 (419)
.....+.+.|||.|++++.+.-- +.|.+..+|+.-..+..+- ....
T Consensus 491 --------------------------------dk~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~eh~ 538 (698)
T KOG2314|consen 491 --------------------------------DKKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTASPEHF 538 (698)
T ss_pred --------------------------------cccccceEEEcCCCcEEEEEEecccccceEEEecchhhhhhccCcccc
Confidence 11225679999999998876421 2388999998853333222 1233
Q ss_pred CeeEEEeCCCCCeEEEEeC------CCcEEEeecCCCeEE
Q 014755 378 PIRAATWDPTCTRLVLCTG------SSHLYMWTPSGAYCV 411 (419)
Q Consensus 378 ~v~~~~~s~~~~~l~s~~~------dg~i~vw~~~~~~~~ 411 (419)
..+.+.|.|.|+++++++. |...++|++.+..+.
T Consensus 539 ~at~veWDPtGRYvvT~ss~wrhk~d~GYri~tfqGrll~ 578 (698)
T KOG2314|consen 539 AATEVEWDPTGRYVVTSSSSWRHKVDNGYRIFTFQGRLLK 578 (698)
T ss_pred ccccceECCCCCEEEEeeehhhhccccceEEEEeecHHHH
Confidence 4678999999999999874 566788888865543
No 201
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.83 E-value=7.3e-19 Score=147.90 Aligned_cols=262 Identities=14% Similarity=0.171 Sum_probs=184.3
Q ss_pred ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccE-eEEEECC-------CCCEEEEEecCCCeEE
Q 014755 45 SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGI-AYARWSP-------DSRHILTTSDFQLRLT 116 (419)
Q Consensus 45 ~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v-~~~~~~~-------~~~~l~~~~~~~~~i~ 116 (419)
.|...+.++.|+.+...+.++. | ..+.+|.-.+......+......+ +.+..-+ ....++.++.|+ .+.
T Consensus 12 r~~e~vc~v~w~~~eei~~~~d-D-h~~~~~~~~~~~s~~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DG-kf~ 88 (737)
T KOG1524|consen 12 RNSEKVCCVDWSSNEEIYFVSD-D-HQIFKWSDVSRDSVEVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDG-RFV 88 (737)
T ss_pred ccceeEEeecccccceEEEecc-C-ceEEEeecccchhhhhhhCCcccCCccccccccccCCCCCcceEEEEcCCc-eEE
Confidence 4667778999998776666554 5 456665543332222222111111 1111111 234577777777 777
Q ss_pred EEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEc
Q 014755 117 VWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWD 196 (419)
Q Consensus 117 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 196 (419)
+.+-...-...+..|...+.+-.|+|||.-|+++++| |.|++|.- +|-+...+.....+|+|++|.|+...++..
T Consensus 89 il~k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GED---G~iKiWSr-sGMLRStl~Q~~~~v~c~~W~p~S~~vl~c- 163 (737)
T KOG1524|consen 89 ILNKSARVERSISAHAAAISSGRWSPDGAGLLTAGED---GVIKIWSR-SGMLRSTVVQNEESIRCARWAPNSNSIVFC- 163 (737)
T ss_pred EecccchhhhhhhhhhhhhhhcccCCCCceeeeecCC---ceEEEEec-cchHHHHHhhcCceeEEEEECCCCCceEEe-
Confidence 7765433333378888999999999999999999987 89999984 455555555567889999999999988873
Q ss_pred CCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCcccee
Q 014755 197 SPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVF 275 (419)
Q Consensus 197 ~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (419)
..+.+.+-.+ ....+-....|.+ -|.++.|++..+.|++|++|-..+|||... ..+..
T Consensus 164 --~g~h~~IKpL~~n~k~i~WkAHDG--iiL~~~W~~~s~lI~sgGED~kfKvWD~~G-~~Lf~---------------- 222 (737)
T KOG1524|consen 164 --QGGHISIKPLAANSKIIRWRAHDG--LVLSLSWSTQSNIIASGGEDFRFKIWDAQG-ANLFT---------------- 222 (737)
T ss_pred --cCCeEEEeecccccceeEEeccCc--EEEEeecCccccceeecCCceeEEeecccC-ccccc----------------
Confidence 2566777666 3344455667666 899999999999999999999999999542 22211
Q ss_pred ccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCC
Q 014755 276 KEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSM 355 (419)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~ 355 (419)
-..|..+|++++|.|+ +.++.++.
T Consensus 223 -----------------------------------------------------S~~~ey~ITSva~npd-~~~~v~S~-- 246 (737)
T KOG1524|consen 223 -----------------------------------------------------SAAEEYAITSVAFNPE-KDYLLWSY-- 246 (737)
T ss_pred -----------------------------------------------------CChhccceeeeeeccc-cceeeeee--
Confidence 1137778999999999 77788877
Q ss_pred CceEEEeeccCCCceeecccCCCeeEEEeCCCCCeEEEEeCCCcEEE
Q 014755 356 PTTLWIWDICRQEPAAILVQKDPIRAATWDPTCTRLVLCTGSSHLYM 402 (419)
Q Consensus 356 ~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~v 402 (419)
+++++=. ...+.|..++||+||..++.|+..|.+.+
T Consensus 247 -nt~R~~~----------p~~GSifnlsWS~DGTQ~a~gt~~G~v~~ 282 (737)
T KOG1524|consen 247 -NTARFSS----------PRVGSIFNLSWSADGTQATCGTSTGQLIV 282 (737)
T ss_pred -eeeeecC----------CCccceEEEEEcCCCceeeccccCceEEE
Confidence 5666211 25677899999999999999988887655
No 202
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.82 E-value=2.4e-19 Score=146.55 Aligned_cols=203 Identities=13% Similarity=0.118 Sum_probs=158.1
Q ss_pred eeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEE
Q 014755 136 KGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLL 214 (419)
Q Consensus 136 ~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~ 214 (419)
..++|+++|..+++++.| |++|+|+......+.....|...|.++.|+|||++|+. .+.+ ..++|+. +|..+.
T Consensus 148 k~vaf~~~gs~latgg~d---g~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~las--ig~d-~~~VW~~~~g~~~a 221 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTD---GTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLAS--IGAD-SARVWSVNTGAALA 221 (398)
T ss_pred eEEEEcCCCCEeeecccc---ceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEE--ecCC-ceEEEEeccCchhh
Confidence 789999999999999987 89999998777777777888899999999999999998 4556 9999999 887777
Q ss_pred EEeecCCCCceeEEEEccCC---CeEE--EEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceee
Q 014755 215 KYQAYESGLGVKSISWSPCG---QFLA--VGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSEL 289 (419)
Q Consensus 215 ~~~~~~~~~~v~~~~~s~~~---~~l~--~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (419)
.............+.|+.|+ .+.+ ....-+.|+.|++..++--..+....
T Consensus 222 ~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~------------------------- 276 (398)
T KOG0771|consen 222 RKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRK------------------------- 276 (398)
T ss_pred hcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhh-------------------------
Confidence 66644444457778888776 2222 22334567777765432211111000
Q ss_pred eccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCc
Q 014755 290 CLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEP 369 (419)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~ 369 (419)
.......|++++.|+||+++|.|+.| |.|-|++..+-+.
T Consensus 277 ---------------------------------------~~~~~~siSsl~VS~dGkf~AlGT~d--GsVai~~~~~lq~ 315 (398)
T KOG0771|consen 277 ---------------------------------------KIKRFKSISSLAVSDDGKFLALGTMD--GSVAIYDAKSLQR 315 (398)
T ss_pred ---------------------------------------hhhccCcceeEEEcCCCcEEEEeccC--CcEEEEEeceeee
Confidence 00123358999999999999999998 9999999999888
Q ss_pred eeecc--cCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeE
Q 014755 370 AAILV--QKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYC 410 (419)
Q Consensus 370 ~~~~~--~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~ 410 (419)
.+... |...|+.+.|+||.+++++.+.|.+..|..+.....
T Consensus 316 ~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~vd~~ 358 (398)
T KOG0771|consen 316 LQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAVDKT 358 (398)
T ss_pred eEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEeeccc
Confidence 87774 999999999999999999999999999998875333
No 203
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.82 E-value=4.7e-18 Score=151.58 Aligned_cols=216 Identities=17% Similarity=0.141 Sum_probs=152.2
Q ss_pred eEEcCCCCEEEEEeC----CeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEE--ccCCcceeee
Q 014755 13 SCFSPNARYIAVAVD----YRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWS--LTQPEWTCKI 86 (419)
Q Consensus 13 ~~~s~d~~~la~~~~----~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~--~~~~~~~~~~ 86 (419)
.+|||||+.||+.+. ..|++||+.+++...+....+.+.+.+|+|||+.|+.....+|...||. +.++. ...+
T Consensus 201 p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~l 279 (427)
T PRK02889 201 PAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSG-LRRL 279 (427)
T ss_pred ceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEEccCCCceEEEEECCCCC-cEEC
Confidence 789999999999872 3499999999987766555566789999999999986554446666665 44444 4556
Q ss_pred ecCCccEeEEEECCCCCEEEEEecCCCeEEEE--EcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEec
Q 014755 87 DEGLAGIAYARWSPDSRHILTTSDFQLRLTVW--SLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSC 164 (419)
Q Consensus 87 ~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~ 164 (419)
..+........|+|||+.|+..+..++...+| ++.+++...+..........+|+|||++|+..+.+++...|.+||+
T Consensus 280 t~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~ 359 (427)
T PRK02889 280 TQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDL 359 (427)
T ss_pred CCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEEC
Confidence 55555567789999999998877644455555 4456655554433344457899999999998876533347999999
Q ss_pred cCCeEEEEEeccccceeeeeECCCCCeEEEEcCCC-CceEEEEcCCCceEEEEeecCCCCceeEEEEccC
Q 014755 165 HTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPL-EYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPC 233 (419)
Q Consensus 165 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~ 233 (419)
.+++.... ... .....+.|+|||+.|+...... ...+++.+.+|.....+..+.. .+...+|+|-
T Consensus 360 ~~g~~~~l-t~~-~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~~g~~~~~l~~~~g--~~~~p~wsp~ 425 (427)
T PRK02889 360 ATGQVTAL-TDT-TRDESPSFAPNGRYILYATQQGGRSVLAAVSSDGRIKQRLSVQGG--DVREPSWGPF 425 (427)
T ss_pred CCCCeEEc-cCC-CCccCceECCCCCEEEEEEecCCCEEEEEEECCCCceEEeecCCC--CCCCCccCCC
Confidence 88765433 222 3346789999999988743222 2457777777877766654433 5777888874
No 204
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=99.82 E-value=4.4e-17 Score=136.53 Aligned_cols=321 Identities=12% Similarity=0.126 Sum_probs=223.7
Q ss_pred eEEcCCCCEEEEEeCCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEecc--------------CCeEEEEEcc
Q 014755 13 SCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYK--------------RLMIQAWSLT 78 (419)
Q Consensus 13 ~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~--------------~g~i~iw~~~ 78 (419)
+++||.|++|++.....|.+|.-..+..+..+.|. .|..+.|||++++|.+-+.. ++.+.+||..
T Consensus 38 ~~~SP~G~~l~~~~~~~V~~~~g~~~~~l~~~~~~-~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~ 116 (561)
T COG5354 38 VSESPLGTYLFSEHAAGVECWGGPSKAKLVRFRHP-DVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIA 116 (561)
T ss_pred eeecCcchheehhhccceEEccccchhheeeeecC-CceecccCcccceeeeeccCCccChhhccCCccccCceeEEecc
Confidence 78999999999998888999998887766666665 58999999999999987642 1258999999
Q ss_pred CCcceeeeecCCcc--Ee-EEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE--e-ccCCCCeeeEEEccCC--CEEEEE
Q 014755 79 QPEWTCKIDEGLAG--IA-YARWSPDSRHILTTSDFQLRLTVWSLLNTACVH--V-QSPKHASKGVAFTQDG--KFAAIC 150 (419)
Q Consensus 79 ~~~~~~~~~~~~~~--v~-~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~--~-~~~~~~~~~~~~~~~~--~~l~~~ 150 (419)
++..+..+.....+ .. -+.|+-+.++++-...+ .+.++++ ++.... + ......+....|+|.+ ..|++-
T Consensus 117 sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv~~--sl~i~e~-t~n~~~~p~~~lr~~gi~dFsisP~~n~~~la~~ 193 (561)
T COG5354 117 SGMIVFSFNGISQPYLGWPVLKFSIDDKYVARVVGS--SLYIHEI-TDNIEEHPFKNLRPVGILDFSISPEGNHDELAYW 193 (561)
T ss_pred CceeEeeccccCCcccccceeeeeecchhhhhhccC--eEEEEec-CCccccCchhhccccceeeEEecCCCCCceEEEE
Confidence 99888777665554 44 68899999988776543 6999997 433322 1 1223567888999975 344443
Q ss_pred eec--CCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCC---------CCceEEEEcCCCceEEEEeec
Q 014755 151 TRR--DCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSP---------LEYKVLIYSPDGRCLLKYQAY 219 (419)
Q Consensus 151 ~~~--~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---------~~~~i~~~d~~~~~~~~~~~~ 219 (419)
... +..+.+++|.+..+..+..-......-..+.|.+.|+++++.-.. ....++++++++.-+......
T Consensus 194 tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i~V~~~~ 273 (561)
T COG5354 194 TPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSIPVEKDL 273 (561)
T ss_pred ccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeecccccceeccc
Confidence 321 223689999998777666655545555678899999988752111 125788999865554444322
Q ss_pred CCCCceeEEEEccCCCeEEEEE--ecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCcccc
Q 014755 220 ESGLGVKSISWSPCGQFLAVGS--YDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQ 297 (419)
Q Consensus 220 ~~~~~v~~~~~s~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (419)
.+ +|..++|.|.++.+++.+ .+-.+.++|++.. ....+.
T Consensus 274 ~~--pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~~~P------------------------------------ 314 (561)
T COG5354 274 KD--PVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LRFYFP------------------------------------ 314 (561)
T ss_pred cc--cceeeeecccCCceeEEecccccceeecccccc-eEEecC------------------------------------
Confidence 33 899999999998776655 6778899998754 211110
Q ss_pred ccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCC-CCceEEEeeccCCCceeecccC
Q 014755 298 GNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDS-MPTTLWIWDICRQEPAAILVQK 376 (419)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d-~~~~i~iwd~~~~~~~~~~~~~ 376 (419)
...=+.+.|||.+++++.++-| .-|.|.+||..........-..
T Consensus 315 -----------------------------------e~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~ 359 (561)
T COG5354 315 -----------------------------------EQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNG 359 (561)
T ss_pred -----------------------------------CcccccccccCcccEEEEecCCccccceEEeccCCceEEEEEeec
Confidence 1112457899999998886543 3378999998765443311122
Q ss_pred CCeeEEEeCCCCCeEEEEe------CCCcEEEeecCCCeEE
Q 014755 377 DPIRAATWDPTCTRLVLCT------GSSHLYMWTPSGAYCV 411 (419)
Q Consensus 377 ~~v~~~~~s~~~~~l~s~~------~dg~i~vw~~~~~~~~ 411 (419)
...+-+.|+||++++.+.. .|..+.||++.+.+..
T Consensus 360 ~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~~~f 400 (561)
T COG5354 360 LNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGAKVF 400 (561)
T ss_pred CCceEeeccCCceEEEecCCCcccccCcceEEEEecCchhh
Confidence 3344568999999887664 3788999999876544
No 205
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.82 E-value=3.8e-18 Score=138.24 Aligned_cols=223 Identities=15% Similarity=0.178 Sum_probs=166.6
Q ss_pred hcccccC---eEEcC-CCCEEEEEe-CCeEEEEecCCCc--------EEEEeecCcceeEEEEecCC-CeEEEEeccCCe
Q 014755 6 AYKQTGP---SCFSP-NARYIAVAV-DYRLVVRDAHSFK--------VVQLFSCLDKISYIEWALDS-EYILCGLYKRLM 71 (419)
Q Consensus 6 ~~~~~~~---~~~s~-d~~~la~~~-~~~i~i~~~~~~~--------~~~~~~~~~~v~~~~~s~~~-~~l~~~~~~~g~ 71 (419)
-.||.+. ++|+| +...||+|| |.+|.||.+..+. .+.+.+|...|-.++|+|.- +.|++++.| .+
T Consensus 77 v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~D-n~ 155 (472)
T KOG0303|consen 77 VCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSD-NT 155 (472)
T ss_pred ccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCC-ce
Confidence 3577776 78999 667889998 6679999987543 33456799999999999954 566777777 79
Q ss_pred EEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCC-CeeeEEEccCCCEEEE
Q 014755 72 IQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKH-ASKGVAFTQDGKFAAI 149 (419)
Q Consensus 72 i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~-~~~~~~~~~~~~~l~~ 149 (419)
|.+|++.+++.+..+. |..-|.++.|+.||.++++++.|+ .|+|||.++++.+. -..|.+ ....+.|-.++..+.+
T Consensus 156 v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDK-kvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~tT 233 (472)
T KOG0303|consen 156 VSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDK-KVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIFTT 233 (472)
T ss_pred EEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccc-eeEEEcCCCCcEeeecccccCCCcceeEEeccCceeee
Confidence 9999999999887876 999999999999999999999999 99999999999888 334443 3477788888885555
Q ss_pred EeecCCCCeEEEEeccCCeEE---EEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCce--EEEEeecCCCCc
Q 014755 150 CTRRDCKDYINLLSCHTWEIM---GVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRC--LLKYQAYESGLG 224 (419)
Q Consensus 150 ~~~~~~~g~v~i~d~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~ 224 (419)
|-..-.+..+-+||...-+.. ..+.. ...|.-.-|.+|.+.+.+. +..|+.|+.|..+... ++.+.......+
T Consensus 234 Gfsr~seRq~aLwdp~nl~eP~~~~elDt-SnGvl~PFyD~dt~ivYl~-GKGD~~IRYyEit~d~P~~hyln~f~S~ep 311 (472)
T KOG0303|consen 234 GFSRMSERQIALWDPNNLEEPIALQELDT-SNGVLLPFYDPDTSIVYLC-GKGDSSIRYFEITNEPPFVHYLNTFSSKEP 311 (472)
T ss_pred ccccccccceeccCcccccCcceeEEecc-CCceEEeeecCCCCEEEEE-ecCCcceEEEEecCCCceeEEecccccCCc
Confidence 544344568999998764332 22222 3456666677887777664 5669999999995544 555554444445
Q ss_pred eeEEEEccC
Q 014755 225 VKSISWSPC 233 (419)
Q Consensus 225 v~~~~~s~~ 233 (419)
-..+.|-|.
T Consensus 312 QRG~g~mPK 320 (472)
T KOG0303|consen 312 QRGMGFMPK 320 (472)
T ss_pred ccccccccc
Confidence 667777775
No 206
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=99.81 E-value=1.7e-17 Score=140.89 Aligned_cols=282 Identities=13% Similarity=0.187 Sum_probs=207.5
Q ss_pred EeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCC--ccEeEEEECCCCCEEEEEecCCCeEEEEEc
Q 014755 43 LFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGL--AGIAYARWSPDSRHILTTSDFQLRLTVWSL 120 (419)
Q Consensus 43 ~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~ 120 (419)
-+.+....+.|..+|||+|+++.+.-.-.|++||+.+-.+. +..|. ..|.-.-.+.|-..++.-..|. .|.+...
T Consensus 47 dfe~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLK--FERhlDae~V~feiLsDD~SK~v~L~~DR-~IefHak 123 (703)
T KOG2321|consen 47 DFEMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLK--FERHLDAEVVDFEILSDDYSKSVFLQNDR-TIEFHAK 123 (703)
T ss_pred hcCCccccceeEecCCCcEEEEecccCCceEEEEcccceee--eeecccccceeEEEeccchhhheEeecCc-eeeehhh
Confidence 34577888999999999998776655579999999876543 33343 3355555555656666666666 6654332
Q ss_pred CCCeEEEeccCCCCeeeEEEcc-CCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCC
Q 014755 121 LNTACVHVQSPKHASKGVAFTQ-DGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPL 199 (419)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~ 199 (419)
.|....+.. +.....++++. ...+++.|+. ..|+-++++.|+.+..+....+.++++..++-..+|++ ++.
T Consensus 124 -~G~hy~~RI-P~~GRDm~y~~~scDly~~gsg----~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~--Gt~ 195 (703)
T KOG2321|consen 124 -YGRHYRTRI-PKFGRDMKYHKPSCDLYLVGSG----SEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLAC--GTE 195 (703)
T ss_pred -cCeeeeeec-CcCCccccccCCCccEEEeecC----cceEEEEccccccccccccccccceeeeecCccceEEe--ccc
Confidence 233222111 12224555543 3445555554 37999999999999999988899999999999999998 888
Q ss_pred CceEEEEcC-CCceEEEEeecCC---------CCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCC
Q 014755 200 EYKVLIYSP-DGRCLLKYQAYES---------GLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGP 269 (419)
Q Consensus 200 ~~~i~~~d~-~~~~~~~~~~~~~---------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~ 269 (419)
+|.+..||. +...+..+....+ ...|+++.|+.+|-.+++|+.+|.+.+||+++.+++..-.|...+
T Consensus 196 ~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~--- 272 (703)
T KOG2321|consen 196 DGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYEL--- 272 (703)
T ss_pred CceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCcc---
Confidence 999999999 5554444433221 235999999999999999999999999999998887765543332
Q ss_pred CccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccC--CeE
Q 014755 270 CFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSD--SQY 347 (419)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--g~~ 347 (419)
+|..+.|-+. +..
T Consensus 273 -----------------------------------------------------------------pi~~l~~~~~~~q~~ 287 (703)
T KOG2321|consen 273 -----------------------------------------------------------------PIKKLDWQDTDQQNK 287 (703)
T ss_pred -----------------------------------------------------------------ceeeecccccCCCce
Confidence 3667777554 556
Q ss_pred EEEecCCCCceEEEeeccCCCceeecccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 348 ICTRNDSMPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 348 l~~~~~d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
+++... ..++|||-.+|+....+.....++.+++-|++.+++++-+++.+..|=+.
T Consensus 288 v~S~Dk---~~~kiWd~~~Gk~~asiEpt~~lND~C~~p~sGm~f~Ane~~~m~~yyiP 343 (703)
T KOG2321|consen 288 VVSMDK---RILKIWDECTGKPMASIEPTSDLNDFCFVPGSGMFFTANESSKMHTYYIP 343 (703)
T ss_pred EEecch---HHhhhcccccCCceeeccccCCcCceeeecCCceEEEecCCCcceeEEcc
Confidence 777665 79999999999999998877889999999999999999988877766554
No 207
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.81 E-value=4.2e-16 Score=123.16 Aligned_cols=283 Identities=12% Similarity=0.144 Sum_probs=187.8
Q ss_pred ceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCC--ccEeEEEECCCCCEEEEEec-C-----CCeEEEEEc
Q 014755 49 KISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGL--AGIAYARWSPDSRHILTTSD-F-----QLRLTVWSL 120 (419)
Q Consensus 49 ~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~-~-----~~~i~iwd~ 120 (419)
...+++|..|...++++..+ -.+||+.+.-+.......+. -.+..|-| -.++++..+. . .+.|.|||=
T Consensus 7 ~~lsvs~NQD~ScFava~~~--Gfriyn~~P~ke~~~r~~~~~G~~~veMLf--R~N~laLVGGg~~pky~pNkviIWDD 82 (346)
T KOG2111|consen 7 KTLSVSFNQDHSCFAVATDT--GFRIYNCDPFKESASRQFIDGGFKIVEMLF--RSNYLALVGGGSRPKYPPNKVIIWDD 82 (346)
T ss_pred ceeEEEEccCCceEEEEecC--ceEEEecCchhhhhhhccccCchhhhhHhh--hhceEEEecCCCCCCCCCceEEEEec
Confidence 34569999999999998743 49999987643322222222 22333333 2345554432 2 137999996
Q ss_pred CCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEecc-CCeEEEEEeccc--cceeeeeECCCCCeEEEEcC
Q 014755 121 LNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCH-TWEIMGVFAVDT--LDLADIEWSPDDSAIVIWDS 197 (419)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~-~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~ 197 (419)
....++.......+|.++.++++ .|++.-. +.|++|... ..+.++.+.... ..+.++.-+.+ +.++++-+
T Consensus 83 ~k~~~i~el~f~~~I~~V~l~r~--riVvvl~----~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~-k~~LafPg 155 (346)
T KOG2111|consen 83 LKERCIIELSFNSEIKAVKLRRD--RIVVVLE----NKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSN-KSLLAFPG 155 (346)
T ss_pred ccCcEEEEEEeccceeeEEEcCC--eEEEEec----CeEEEEEcCCChhheeeeecccCCCceEeecCCCC-ceEEEcCC
Confidence 66666665566788999999876 5666665 589999987 456666655432 23444433333 33444445
Q ss_pred CCCceEEEEcCCCce---EEEEeecCCCCceeEEEEccCCCeEEEEEecCc-EEEEEcCCceeeeeecccccccCCCccc
Q 014755 198 PLEYKVLIYSPDGRC---LLKYQAYESGLGVKSISWSPCGQFLAVGSYDQT-LRVLNHLTWKTFAEFMHLSTVRGPCFPA 273 (419)
Q Consensus 198 ~~~~~i~~~d~~~~~---~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~-i~v~d~~~~~~~~~~~~~~~~~~~~~~~ 273 (419)
..-|.|.+.|+.... ...+..|.. .|.+++.+.+|..+|++|..|+ |||||..+|+.+.++...
T Consensus 156 ~k~GqvQi~dL~~~~~~~p~~I~AH~s--~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG---------- 223 (346)
T KOG2111|consen 156 FKTGQVQIVDLASTKPNAPSIINAHDS--DIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRG---------- 223 (346)
T ss_pred CccceEEEEEhhhcCcCCceEEEcccC--ceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecC----------
Confidence 556999999993222 366677766 8999999999999999999997 899999999999988611
Q ss_pred eeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecC
Q 014755 274 VFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRND 353 (419)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 353 (419)
.....|.+++||||+.+||++++
T Consensus 224 ---------------------------------------------------------~d~A~iy~iaFSp~~s~LavsSd 246 (346)
T KOG2111|consen 224 ---------------------------------------------------------VDRADIYCIAFSPNSSWLAVSSD 246 (346)
T ss_pred ---------------------------------------------------------CchheEEEEEeCCCccEEEEEcC
Confidence 02234899999999999999999
Q ss_pred CCCceEEEeeccCCCcee-----------ecc--------------cCCCeeEEEeCCCCCeEEEEeCCCcEEEeecC--
Q 014755 354 SMPTTLWIWDICRQEPAA-----------ILV--------------QKDPIRAATWDPTCTRLVLCTGSSHLYMWTPS-- 406 (419)
Q Consensus 354 d~~~~i~iwd~~~~~~~~-----------~~~--------------~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~-- 406 (419)
- |+++||.+....... .+. ..+...-++|-.+.+.++..+.||..+-+.+.
T Consensus 247 K--gTlHiF~l~~~~~~~~~~SSl~~~~~~lpky~~S~wS~~~f~l~~~~~~~~~fg~~~nsvi~i~~Dgsy~k~~f~~~ 324 (346)
T KOG2111|consen 247 K--GTLHIFSLRDTENTEDESSSLSFKRLVLPKYFSSEWSFAKFQLPQGTQCIIAFGSETNTVIAICADGSYYKFKFDPK 324 (346)
T ss_pred C--CeEEEEEeecCCCCccccccccccccccchhcccceeEEEEEccCCCcEEEEecCCCCeEEEEEeCCcEEEEEeccc
Confidence 8 999999887532111 110 12344456676665666667778876544432
Q ss_pred -CCeEEec
Q 014755 407 -GAYCVSN 413 (419)
Q Consensus 407 -~~~~~~~ 413 (419)
+|++.+.
T Consensus 325 ~~g~~~~~ 332 (346)
T KOG2111|consen 325 NGGESSRH 332 (346)
T ss_pred cccchhhh
Confidence 5555443
No 208
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.81 E-value=3.5e-18 Score=135.91 Aligned_cols=190 Identities=10% Similarity=0.100 Sum_probs=138.2
Q ss_pred EEEEE-eCCeEEEEecCCCcEEEEee-cCcceeEEEEec--CCCeEEEEeccCCeEEEEEccCCcceeee--ecCC-ccE
Q 014755 21 YIAVA-VDYRLVVRDAHSFKVVQLFS-CLDKISYIEWAL--DSEYILCGLYKRLMIQAWSLTQPEWTCKI--DEGL-AGI 93 (419)
Q Consensus 21 ~la~~-~~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~--~~~~l~~~~~~~g~i~iw~~~~~~~~~~~--~~~~-~~v 93 (419)
.+|++ |.+.|++||..+++.+..+. +...+..++|.. ....+.+++.| |+|++||++......++ ..+. .+.
T Consensus 42 ~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssD-G~Vr~wD~Rs~~e~a~~~~~~~~~~~f 120 (376)
T KOG1188|consen 42 AVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSD-GTVRLWDIRSQAESARISWTQQSGTPF 120 (376)
T ss_pred eEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccC-CeEEEEEeecchhhhheeccCCCCCcc
Confidence 35555 68999999999998888775 778888999987 35567777766 99999999877554443 3333 356
Q ss_pred eEEEECCCCCEEEEEec---CCCeEEEEEcCCCeE-EE--eccCCCCeeeEEEccCC-CEEEEEeecCCCCeEEEEeccC
Q 014755 94 AYARWSPDSRHILTTSD---FQLRLTVWSLLNTAC-VH--VQSPKHASKGVAFTQDG-KFAAICTRRDCKDYINLLSCHT 166 (419)
Q Consensus 94 ~~~~~~~~~~~l~~~~~---~~~~i~iwd~~~~~~-~~--~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~g~v~i~d~~~ 166 (419)
.+++..-.++.++++.. ....|.+||++..+. +. ...|...|+++.|+|.. +.|++|+.| |.|.+||++.
T Consensus 121 ~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvD---GLvnlfD~~~ 197 (376)
T KOG1188|consen 121 ICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVD---GLVNLFDTKK 197 (376)
T ss_pred eEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeeccc---ceEEeeecCC
Confidence 67777667777777642 223899999998665 44 67889999999999976 788888887 8999999976
Q ss_pred CeEE---EEEeccccceeeeeECCCC-CeEEEEcCCCCceEEEEcC-CCceEEEE
Q 014755 167 WEIM---GVFAVDTLDLADIEWSPDD-SAIVIWDSPLEYKVLIYSP-DGRCLLKY 216 (419)
Q Consensus 167 ~~~~---~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~~~i~~~d~-~~~~~~~~ 216 (419)
...- ...-.+...|.++.|..++ +.|.+ .+......+|++ .+.....+
T Consensus 198 d~EeDaL~~viN~~sSI~~igw~~~~ykrI~c--lTH~Etf~~~ele~~~~~~~~ 250 (376)
T KOG1188|consen 198 DNEEDALLHVINHGSSIHLIGWLSKKYKRIMC--LTHMETFAIYELEDGSEETWL 250 (376)
T ss_pred CcchhhHHHhhcccceeeeeeeecCCcceEEE--EEccCceeEEEccCCChhhcc
Confidence 4321 1122245669999999887 23444 456788999999 66544444
No 209
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.81 E-value=1.4e-17 Score=150.95 Aligned_cols=283 Identities=13% Similarity=0.150 Sum_probs=200.6
Q ss_pred CeEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEee----cCcceeEEEEec--CCCeEEEEeccCCeEEEEEccCC----
Q 014755 12 PSCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFS----CLDKISYIEWAL--DSEYILCGLYKRLMIQAWSLTQP---- 80 (419)
Q Consensus 12 ~~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~----~~~~v~~~~~s~--~~~~l~~~~~~~g~i~iw~~~~~---- 80 (419)
.+.|+|-...++++. ...|.+||.+.++.+..+. ....|+.+.+-. |..++++++.| |.|+||+-...
T Consensus 1069 ~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~d-GvIRIwk~y~~~~~~ 1147 (1387)
T KOG1517|consen 1069 TLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSD-GVIRIWKDYADKWKK 1147 (1387)
T ss_pred eeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccC-ceEEEecccccccCC
Confidence 388999999999988 6779999999999888765 245688998876 45678888866 99999985322
Q ss_pred -cceeeeec-------CCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-ec-cCCCCeeeEEEcc-CCCEEEE
Q 014755 81 -EWTCKIDE-------GLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQ-SPKHASKGVAFTQ-DGKFAAI 149 (419)
Q Consensus 81 -~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~-~~~~~~~~~~~~~-~~~~l~~ 149 (419)
+.+....+ ..+.-.-+.|.....+|+++|+-. .|+|||........ +. .....++++.-+. .|+.+++
T Consensus 1148 ~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r-~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~A 1226 (1387)
T KOG1517|consen 1148 PELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVR-SIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAA 1226 (1387)
T ss_pred ceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCee-EEEEEecccceeEeecccCCCccceeecccccCCceEEE
Confidence 22221111 111113467877777788777666 99999999887777 33 2333445555433 3588888
Q ss_pred EeecCCCCeEEEEeccCCe---EEEEEeccccc--eeeeeECCCCCe-EEEEcCCCCceEEEEcCCC-ceEE--EEeecC
Q 014755 150 CTRRDCKDYINLLSCHTWE---IMGVFAVDTLD--LADIEWSPDDSA-IVIWDSPLEYKVLIYSPDG-RCLL--KYQAYE 220 (419)
Q Consensus 150 ~~~~~~~g~v~i~d~~~~~---~~~~~~~~~~~--v~~~~~~~~~~~-l~~~~~~~~~~i~~~d~~~-~~~~--~~~~~~ 220 (419)
|..| |.|++||.+... .+...+.|+.. |..+.+.+.|-. ++. ++.+|.|++||+.. .... .+..+.
T Consensus 1227 GfaD---GsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvS--gs~~G~I~~~DlR~~~~e~~~~iv~~~ 1301 (1387)
T KOG1517|consen 1227 GFAD---GSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVS--GSQDGDIQLLDLRMSSKETFLTIVAHW 1301 (1387)
T ss_pred eecC---CceEEeecccCCccccceeecccCCcccceeEEeecCCCcceee--eccCCeEEEEecccCcccccceeeecc
Confidence 8887 899999998743 46667778776 999999887755 555 78899999999944 2222 222221
Q ss_pred C-CCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeec-ccccccCCCccceeccCCCcccccceeeeccCccccc
Q 014755 221 S-GLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFM-HLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQG 298 (419)
Q Consensus 221 ~-~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (419)
. .+..+++..+++...+|+|+. +.|+||++. |+.+..+. ++..+
T Consensus 1302 ~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~-G~~l~~~k~n~~F~-------------------------------- 1347 (1387)
T KOG1517|consen 1302 EYGSALTALTVHEHAPIIASGSA-QLIKIYSLS-GEQLNIIKYNPGFM-------------------------------- 1347 (1387)
T ss_pred ccCccceeeeeccCCCeeeecCc-ceEEEEecC-hhhhcccccCcccc--------------------------------
Confidence 1 124899999999999999998 899999975 44444443 11111
Q ss_pred cccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCC
Q 014755 299 NSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQE 368 (419)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~ 368 (419)
.-..+.+.+++|+|-.-.+|+|+.| ..|.||.....+
T Consensus 1348 -------------------------------~q~~gs~scL~FHP~~~llAaG~~D--s~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1348 -------------------------------GQRIGSVSCLAFHPHRLLLAAGSAD--STVSIYSCEKPR 1384 (1387)
T ss_pred -------------------------------cCcCCCcceeeecchhHhhhhccCC--ceEEEeecCCcC
Confidence 0123346899999999999999988 999999877654
No 210
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=99.81 E-value=8e-17 Score=129.32 Aligned_cols=176 Identities=16% Similarity=0.196 Sum_probs=129.2
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEee-cCcceeEEEEecC-CCeEEEEeccCCeEEEEEccCC----ccee-
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALD-SEYILCGLYKRLMIQAWSLTQP----EWTC- 84 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~-~~~l~~~~~~~g~i~iw~~~~~----~~~~- 84 (419)
++|++.-.-+|++. |+.|++|+-....+..+.. ....|++++|-|. ++.|++|+. +-|.+|..... ..++
T Consensus 104 ~aWhqH~~~fava~nddvVriy~ksst~pt~Lks~sQrnvtclawRPlsaselavgCr--~gIciW~~s~tln~~r~~~~ 181 (445)
T KOG2139|consen 104 VAWHQHIIAFAVATNDDVVRIYDKSSTCPTKLKSVSQRNVTCLAWRPLSASELAVGCR--AGICIWSDSRTLNANRNIRM 181 (445)
T ss_pred EeechhhhhhhhhccCcEEEEeccCCCCCceecchhhcceeEEEeccCCcceeeeeec--ceeEEEEcCccccccccccc
Confidence 78888555556665 8899999987743333322 3567999999995 456777774 57999987532 1110
Q ss_pred ------eee--cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEec-cCCCCeeeEEEccCCCEEEEEeecCC
Q 014755 85 ------KID--EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQ-SPKHASKGVAFTQDGKFAAICTRRDC 155 (419)
Q Consensus 85 ------~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~ 155 (419)
++. ....+|+++.|.+||..+++++-+...|.|||..++..+.+. .....+.-+.||||+.+|+.+.-|
T Consensus 182 ~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~d-- 259 (445)
T KOG2139|consen 182 MSTHHLQVLQDPGHNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCD-- 259 (445)
T ss_pred ccccchhheeCCCCceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEeccc--
Confidence 111 122579999999999999999877669999999999888854 555677899999999999999887
Q ss_pred CCeEEEEeccC-CeEEEEEeccccceeeeeECCCCCeEEE
Q 014755 156 KDYINLLSCHT-WEIMGVFAVDTLDLADIEWSPDDSAIVI 194 (419)
Q Consensus 156 ~g~v~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 194 (419)
+..++|+... +...+-. ...+.|....|+|.|++|++
T Consensus 260 -avfrlw~e~q~wt~erw~-lgsgrvqtacWspcGsfLLf 297 (445)
T KOG2139|consen 260 -AVFRLWQENQSWTKERWI-LGSGRVQTACWSPCGSFLLF 297 (445)
T ss_pred -ceeeeehhcccceeccee-ccCCceeeeeecCCCCEEEE
Confidence 7999995543 3333333 33458889999999998876
No 211
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.81 E-value=7.1e-19 Score=148.77 Aligned_cols=247 Identities=11% Similarity=0.121 Sum_probs=182.6
Q ss_pred eecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC--------cceeeeecCCccEeEEEECCCCCEEEEEecCCCeE
Q 014755 44 FSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP--------EWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRL 115 (419)
Q Consensus 44 ~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i 115 (419)
..|.+.|..++|.|-...|++++.+ |++.+|++... +.+.++.+|.++|.|++..++++.+++++.|+ +|
T Consensus 291 ~s~~d~ir~l~~~~sep~lit~sed-~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg-~I 368 (577)
T KOG0642|consen 291 RSHDDCIRALAFHPSEPVLITASED-GTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDG-TI 368 (577)
T ss_pred ecchhhhhhhhcCCCCCeEEEeccc-cchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCc-ee
Confidence 3488899999999999999999977 89999999321 45677899999999999999999999999998 99
Q ss_pred EEEEcCCC---------eEEE--eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEecc--ccceee
Q 014755 116 TVWSLLNT---------ACVH--VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVD--TLDLAD 182 (419)
Q Consensus 116 ~iwd~~~~---------~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~--~~~v~~ 182 (419)
+.|++... ..+. +.+|...++.+++++....|++++.| |++++|+.....+ ..+... .+....
T Consensus 369 ~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~D---gTvr~w~~~~~~~-~~f~~~~e~g~Pls 444 (577)
T KOG0642|consen 369 RCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSD---GTVRLWEPTEESP-CTFGEPKEHGYPLS 444 (577)
T ss_pred eeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCC---ceEEeeccCCcCc-cccCCccccCCcce
Confidence 99966521 1122 67889999999999999999999987 8999999876655 222221 123344
Q ss_pred eeECCCCCeEEEEcCCCCceEEEEcC----CCceEEEEeecC-----CCCceeEEEEccCCCeEEEEEecCcEEEEEcCC
Q 014755 183 IEWSPDDSAIVIWDSPLEYKVLIYSP----DGRCLLKYQAYE-----SGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLT 253 (419)
Q Consensus 183 ~~~~~~~~~l~~~~~~~~~~i~~~d~----~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~ 253 (419)
+.+-.....+.+. +.....+++ .+..+..+.... ....+..+.++|.+.+.+++..|+.|+++|..+
T Consensus 445 vd~~ss~~a~~~~----s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~ 520 (577)
T KOG0642|consen 445 VDRTSSRPAHSLA----SFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKT 520 (577)
T ss_pred EeeccchhHhhhh----hcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccccc
Confidence 4443322222221 122222222 223333322111 112577889999999999999999999999998
Q ss_pred ceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCC
Q 014755 254 WKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPK 333 (419)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (419)
++++.... .|.
T Consensus 521 ~~~l~s~~---------------------------------------------------------------------a~~ 531 (577)
T KOG0642|consen 521 GKILHSMV---------------------------------------------------------------------AHK 531 (577)
T ss_pred cccchhee---------------------------------------------------------------------ecc
Confidence 88766543 366
Q ss_pred cceEEEEEccCCeEEEEecCCCCceEEEeeccCCCcee
Q 014755 334 QGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAA 371 (419)
Q Consensus 334 ~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~ 371 (419)
..++++++.|+|.+|++++.| +.+++|.+....+..
T Consensus 532 ~svtslai~~ng~~l~s~s~d--~sv~l~kld~k~~~~ 567 (577)
T KOG0642|consen 532 DSVTSLAIDPNGPYLMSGSHD--GSVRLWKLDVKTCVL 567 (577)
T ss_pred ceecceeecCCCceEEeecCC--ceeehhhccchheee
Confidence 678999999999999999999 999999987766553
No 212
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.81 E-value=2.5e-19 Score=158.20 Aligned_cols=276 Identities=13% Similarity=0.152 Sum_probs=201.2
Q ss_pred EeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC
Q 014755 43 LFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN 122 (419)
Q Consensus 43 ~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~ 122 (419)
+.+|...|+|..|...|.++++|+.| ..++||.++++.+...+.+|.+.|+.++.+.+...+++++.|. .|++|.+..
T Consensus 186 LlgH~naVyca~fDrtg~~Iitgsdd-~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~-vIrvWrl~~ 263 (1113)
T KOG0644|consen 186 LLGHRNAVYCAIFDRTGRYIITGSDD-RLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDK-VIRVWRLPD 263 (1113)
T ss_pred HHhhhhheeeeeeccccceEeecCcc-ceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCc-eEEEEecCC
Confidence 44688999999999999999999966 6999999999999999999999999999999999999999988 999999999
Q ss_pred CeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEE----ec-cccceeeeeECCCCCeEEEEc
Q 014755 123 TACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVF----AV-DTLDLADIEWSPDDSAIVIWD 196 (419)
Q Consensus 123 ~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~----~~-~~~~v~~~~~~~~~~~l~~~~ 196 (419)
+.++. +.+|.+.|++++|+|-. +.+. +|++++||.+ ...+... .. ....+..+.|..++...++
T Consensus 264 ~~pvsvLrghtgavtaiafsP~~----sss~---dgt~~~wd~r-~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~T-- 333 (1113)
T KOG0644|consen 264 GAPVSVLRGHTGAVTAIAFSPRA----SSSD---DGTCRIWDAR-LEPRIYVPRPLKFTEKDLVDSILFENNGDRFLT-- 333 (1113)
T ss_pred CchHHHHhccccceeeeccCccc----cCCC---CCceEecccc-ccccccCCCCCCcccccceeeeecccccccccc--
Confidence 99998 89999999999999975 3333 3899999988 2221111 00 1123445555555555555
Q ss_pred CCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCC-CeEEEEEecCcEEEEEcCCceeeeeecccccccCCCcccee
Q 014755 197 SPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCG-QFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVF 275 (419)
Q Consensus 197 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (419)
++.++.-..|...... .+.. .+.-+..+.+- .+.+++-.+-.+++|++.+|..+..+.
T Consensus 334 gs~d~ea~n~e~~~l~-----~~~~--~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~-------------- 392 (1113)
T KOG0644|consen 334 GSRDGEARNHEFEQLA-----WRSN--LLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLM-------------- 392 (1113)
T ss_pred ccCCcccccchhhHhh-----hhcc--ceEEEeccccccccceeeeeeeEeeeeecccchhhhhhc--------------
Confidence 4555554444431000 0000 11111111121 355566667788999988876655432
Q ss_pred ccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCe-EEEEecCC
Q 014755 276 KEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQ-YICTRNDS 354 (419)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~d 354 (419)
+|...+..+.++|-+. ...+++.|
T Consensus 393 -------------------------------------------------------ghsd~~yvLd~Hpfn~ri~msag~d 417 (1113)
T KOG0644|consen 393 -------------------------------------------------------GHSDEVYVLDVHPFNPRIAMSAGYD 417 (1113)
T ss_pred -------------------------------------------------------ccccceeeeeecCCCcHhhhhccCC
Confidence 4677788899999554 45577888
Q ss_pred CCceEEEeeccCCCceeecc-cCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCC
Q 014755 355 MPTTLWIWDICRQEPAAILV-QKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGA 408 (419)
Q Consensus 355 ~~~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~ 408 (419)
|...|||+-.|.++..+. ....+..-+||+||..++....-|.+.|.....+
T Consensus 418 --gst~iwdi~eg~pik~y~~gh~kl~d~kFSqdgts~~lsd~hgql~i~g~gqs 470 (1113)
T KOG0644|consen 418 --GSTIIWDIWEGIPIKHYFIGHGKLVDGKFSQDGTSIALSDDHGQLYILGTGQS 470 (1113)
T ss_pred --CceEeeecccCCcceeeecccceeeccccCCCCceEecCCCCCceEEeccCCC
Confidence 999999999988776653 3556777899999999998888899999887643
No 213
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.80 E-value=2.1e-18 Score=145.95 Aligned_cols=258 Identities=12% Similarity=0.115 Sum_probs=189.2
Q ss_pred eeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC--------CeEEE-eccCCCCeeeEEEccCCCEEEEEeecCC
Q 014755 85 KIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN--------TACVH-VQSPKHASKGVAFTQDGKFAAICTRRDC 155 (419)
Q Consensus 85 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~--------~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 155 (419)
++..|...|+.++|.|....|++++.++ .+++|+++. -+++. +..|..+|.|+++.+++..+++++-|
T Consensus 289 tl~s~~d~ir~l~~~~sep~lit~sed~-~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~D-- 365 (577)
T KOG0642|consen 289 TLRSHDDCIRALAFHPSEPVLITASEDG-TLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGID-- 365 (577)
T ss_pred eeecchhhhhhhhcCCCCCeEEEecccc-chhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccC--
Confidence 4566788899999999999999999988 999999932 12233 88999999999999999999999998
Q ss_pred CCeEEEEeccC----------CeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCce
Q 014755 156 KDYINLLSCHT----------WEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGV 225 (419)
Q Consensus 156 ~g~v~i~d~~~----------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v 225 (419)
|+|+.|++.. ......+.+|...++.+++++....|+. ++.||+++.|+..+.....+.........
T Consensus 366 -g~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Lls--cs~DgTvr~w~~~~~~~~~f~~~~e~g~P 442 (577)
T KOG0642|consen 366 -GTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLS--CSSDGTVRLWEPTEESPCTFGEPKEHGYP 442 (577)
T ss_pred -ceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceee--ecCCceEEeeccCCcCccccCCccccCCc
Confidence 8999996542 1234567889999999999999998888 77799999999954444444443333355
Q ss_pred eEEEEccCCCeEEEEE-ecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccC
Q 014755 226 KSISWSPCGQFLAVGS-YDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATN 304 (419)
Q Consensus 226 ~~~~~s~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (419)
.++.+-.....++.++ .-+.--+++......+..+.... . |
T Consensus 443 lsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~-~--------------~----------------------- 484 (577)
T KOG0642|consen 443 LSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSA-S--------------P----------------------- 484 (577)
T ss_pred ceEeeccchhHhhhhhcccccccchhhhhhhheeeccccC-C--------------C-----------------------
Confidence 6666654332222222 22222233333333333322000 0 0
Q ss_pred CceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec-ccCCCeeEEE
Q 014755 305 GHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL-VQKDPIRAAT 383 (419)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~-~~~~~v~~~~ 383 (419)
.+.....+..+...|.+.+.+++..| +.|+++|..+++++... .|...+++++
T Consensus 485 ------------------------~~~~~~~in~vVs~~~~~~~~~~hed--~~Ir~~dn~~~~~l~s~~a~~~svtsla 538 (577)
T KOG0642|consen 485 ------------------------GPRRYPQINKVVSHPTADITFTAHED--RSIRFFDNKTGKILHSMVAHKDSVTSLA 538 (577)
T ss_pred ------------------------cccccCccceEEecCCCCeeEecccC--Cceecccccccccchheeeccceeccee
Confidence 00011236678889999999999999 99999999999988666 5999999999
Q ss_pred eCCCCCeEEEEeCCCcEEEeecCCCeEEe
Q 014755 384 WDPTCTRLVLCTGSSHLYMWTPSGAYCVS 412 (419)
Q Consensus 384 ~s~~~~~l~s~~~dg~i~vw~~~~~~~~~ 412 (419)
+.|+|.+|++++.|+.+++|.+....++.
T Consensus 539 i~~ng~~l~s~s~d~sv~l~kld~k~~~~ 567 (577)
T KOG0642|consen 539 IDPNGPYLMSGSHDGSVRLWKLDVKTCVL 567 (577)
T ss_pred ecCCCceEEeecCCceeehhhccchheee
Confidence 99999999999999999999998666654
No 214
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.80 E-value=3.3e-17 Score=148.70 Aligned_cols=287 Identities=12% Similarity=0.127 Sum_probs=202.6
Q ss_pred ceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCC---ccEeEEEECC--CCCEEEEEecCCCeEEEEEcC-C
Q 014755 49 KISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGL---AGIAYARWSP--DSRHILTTSDFQLRLTVWSLL-N 122 (419)
Q Consensus 49 ~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~---~~v~~~~~~~--~~~~l~~~~~~~~~i~iwd~~-~ 122 (419)
+-..+.|+|-...++++... -.|++||.+.++....+..+. ..|+.+.+-. |...+++++.|+ .|+||+-- .
T Consensus 1066 ~pk~~~~hpf~p~i~~ad~r-~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dG-vIRIwk~y~~ 1143 (1387)
T KOG1517|consen 1066 PPKTLKFHPFEPQIAAADDR-ERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDG-VIRIWKDYAD 1143 (1387)
T ss_pred CCceeeecCCCceeEEcCCc-ceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCc-eEEEeccccc
Confidence 46678899988889988744 599999999998877765544 4588888755 556788888887 99999632 2
Q ss_pred ----CeEEE-ecc-------CCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEecc-ccceeeeeECC-C
Q 014755 123 ----TACVH-VQS-------PKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVD-TLDLADIEWSP-D 188 (419)
Q Consensus 123 ----~~~~~-~~~-------~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~-~~~v~~~~~~~-~ 188 (419)
.+.+. ... ..+.-.-++|.....+|++++.- ..|+|||.........+... +..++++.-+. .
T Consensus 1144 ~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~---r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~ 1220 (1387)
T KOG1517|consen 1144 KWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDV---RSIRIWDAHKEQVVADIPYGSSTLVTALSADLVH 1220 (1387)
T ss_pred ccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCe---eEEEEEecccceeEeecccCCCccceeecccccC
Confidence 22222 111 11112456777766666666543 69999999987777666543 34466665443 3
Q ss_pred CCeEEEEcCCCCceEEEEcC----CCceEEEEeecCCCCceeEEEEccCCC-eEEEEEecCcEEEEEcCCceeeeeeccc
Q 014755 189 DSAIVIWDSPLEYKVLIYSP----DGRCLLKYQAYESGLGVKSISWSPCGQ-FLAVGSYDQTLRVLNHLTWKTFAEFMHL 263 (419)
Q Consensus 189 ~~~l~~~~~~~~~~i~~~d~----~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~ 263 (419)
|..++. +..||.|++||. ....+.....|....+|..+.+.+.|- .|++|+.+|.|++||++.......+..
T Consensus 1221 gn~i~A--GfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~i- 1297 (1387)
T KOG1517|consen 1221 GNIIAA--GFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTI- 1297 (1387)
T ss_pred CceEEE--eecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCccccccee-
Confidence 566776 778999999998 223556667776655599999999775 599999999999999986411111110
Q ss_pred ccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEcc
Q 014755 264 STVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSS 343 (419)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 343 (419)
+ ..+ .-.+.++++..++
T Consensus 1298 --v------~~~-------------------------------------------------------~yGs~lTal~VH~ 1314 (1387)
T KOG1517|consen 1298 --V------AHW-------------------------------------------------------EYGSALTALTVHE 1314 (1387)
T ss_pred --e------ecc-------------------------------------------------------ccCccceeeeecc
Confidence 0 000 0012378999999
Q ss_pred CCeEEEEecCCCCceEEEeeccCCCceeec------c-cCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCe
Q 014755 344 DSQYICTRNDSMPTTLWIWDICRQEPAAIL------V-QKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAY 409 (419)
Q Consensus 344 ~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~------~-~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~ 409 (419)
+...+|+|+. +.|+||++...++..+. + ..+.+.|++|+|---+||.|+.|.+|.||..+...
T Consensus 1315 hapiiAsGs~---q~ikIy~~~G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1315 HAPIIASGSA---QLIKIYSLSGEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCEKPR 1384 (1387)
T ss_pred CCCeeeecCc---ceEEEEecChhhhcccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEeecCCcC
Confidence 9999999997 79999998865543222 2 44678999999999999999999999999987544
No 215
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.80 E-value=1e-16 Score=143.38 Aligned_cols=226 Identities=12% Similarity=0.134 Sum_probs=155.1
Q ss_pred eEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCC--eEEEEEccCCcceeeeecCCccEeEEEECCCCCEEE
Q 014755 29 RLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRL--MIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHIL 106 (419)
Q Consensus 29 ~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g--~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 106 (419)
.|.++|..+.....+..+...+.+..|||||+.|+..+.+++ .|++||+.+++.. .+..........+|+|||+.|+
T Consensus 199 ~l~i~d~dG~~~~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~-~lt~~~g~~~~~~wSPDG~~La 277 (448)
T PRK04792 199 QLMIADYDGYNEQMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVRE-KVTSFPGINGAPRFSPDGKKLA 277 (448)
T ss_pred EEEEEeCCCCCceEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeE-EecCCCCCcCCeeECCCCCEEE
Confidence 577888877766666778889999999999999998765433 6888899887643 3333333445789999999998
Q ss_pred EEecCCC--eEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeee
Q 014755 107 TTSDFQL--RLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIE 184 (419)
Q Consensus 107 ~~~~~~~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~ 184 (419)
.....++ .|+++|+.+++...+..+.......+|+||++.|++.+..++...|+++|+.+++..+. ..........+
T Consensus 278 ~~~~~~g~~~Iy~~dl~tg~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~L-t~~g~~~~~~~ 356 (448)
T PRK04792 278 LVLSKDGQPEIYVVDIATKALTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRL-TFEGEQNLGGS 356 (448)
T ss_pred EEEeCCCCeEEEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEE-ecCCCCCcCee
Confidence 7643332 48888999888777665555567899999999998877654445788889887765433 22223344578
Q ss_pred ECCCCCeEEEEcCCC-CceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecC---cEEEEEcCCceeeeee
Q 014755 185 WSPDDSAIVIWDSPL-EYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQ---TLRVLNHLTWKTFAEF 260 (419)
Q Consensus 185 ~~~~~~~l~~~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~---~i~v~d~~~~~~~~~~ 260 (419)
|+|||+.+++..... ...|.++|+.+.....+.... ......|+|+|+.|+..+.++ .+++++. +++....+
T Consensus 357 ~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~~lt~~~---~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~-~G~~~~~l 432 (448)
T PRK04792 357 ITPDGRSMIMVNRTNGKFNIARQDLETGAMQVLTSTR---LDESPSVAPNGTMVIYSTTYQGKQVLAAVSI-DGRFKARL 432 (448)
T ss_pred ECCCCCEEEEEEecCCceEEEEEECCCCCeEEccCCC---CCCCceECCCCCEEEEEEecCCceEEEEEEC-CCCceEEC
Confidence 999999988754321 236777888443344443221 233568999999888776543 3667775 34443333
No 216
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.80 E-value=4.5e-17 Score=144.53 Aligned_cols=263 Identities=14% Similarity=0.165 Sum_probs=184.4
Q ss_pred CeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEE--E-----eccCCCCeeeEEEcc
Q 014755 70 LMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACV--H-----VQSPKHASKGVAFTQ 142 (419)
Q Consensus 70 g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~--~-----~~~~~~~~~~~~~~~ 142 (419)
+.+.+|++...............|.++.|+|....++++|...|+|.+||++.+... . ...|..++..+.|..
T Consensus 222 ~~~~vW~~~~p~~Pe~~~~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~ 301 (555)
T KOG1587|consen 222 GVLLVWSLKNPNTPELVLESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQ 301 (555)
T ss_pred ceEEEEecCCCCCceEEEecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEec
Confidence 479999998875555555677889999999987777777766669999999976542 1 345677788888866
Q ss_pred CC--CEEEEEeecCCCCeEEEEeccCCeEE-E-----EEe------ccccceeeeeECCCCCeEEEEcCCCCceEEEEcC
Q 014755 143 DG--KFAAICTRRDCKDYINLLSCHTWEIM-G-----VFA------VDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP 208 (419)
Q Consensus 143 ~~--~~l~~~~~~~~~g~v~i~d~~~~~~~-~-----~~~------~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~ 208 (419)
+- .-+++++.| |.|..|+++.-... . ... .....+++++|.+.....++. ++..|.|+.-+.
T Consensus 302 ~~~~~~f~s~ssD---G~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiV-GTe~G~v~~~~r 377 (555)
T KOG1587|consen 302 NEHNTEFFSLSSD---GSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIV-GTEEGKVYKGCR 377 (555)
T ss_pred cCCCCceEEEecC---CcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEE-EcCCcEEEEEec
Confidence 54 448888887 89999988753221 1 111 122457889998876544432 566788877443
Q ss_pred ---CCce------EEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcC-CceeeeeecccccccCCCccceeccC
Q 014755 209 ---DGRC------LLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHL-TWKTFAEFMHLSTVRGPCFPAVFKEV 278 (419)
Q Consensus 209 ---~~~~------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (419)
+... ...+..|. ++|+.+.++|-+..++..+.|.++++|... ...++..+
T Consensus 378 ~g~~~~~~~~~~~~~~~~~h~--g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~------------------ 437 (555)
T KOG1587|consen 378 KGYTPAPEVSYKGHSTFITHI--GPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSL------------------ 437 (555)
T ss_pred cCCcccccccccccccccccC--cceEeeecCCCccceeeeeccceeEeccccCCCCcchhh------------------
Confidence 1111 22233333 489999999987655555559999999965 32332222
Q ss_pred CCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCe-EEEEecCCCCc
Q 014755 279 DEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQ-YICTRNDSMPT 357 (419)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~d~~~ 357 (419)
..+...|++++|||-.. .+|++..+ |
T Consensus 438 ---------------------------------------------------~~~~~~v~~vaWSptrpavF~~~d~~--G 464 (555)
T KOG1587|consen 438 ---------------------------------------------------DSSPDYVTDVAWSPTRPAVFATVDGD--G 464 (555)
T ss_pred ---------------------------------------------------hhccceeeeeEEcCcCceEEEEEcCC--C
Confidence 12445589999999764 56666667 9
Q ss_pred eEEEeeccCCCceeec--c-cCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCe
Q 014755 358 TLWIWDICRQEPAAIL--V-QKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAY 409 (419)
Q Consensus 358 ~i~iwd~~~~~~~~~~--~-~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~ 409 (419)
.|.|||+......... . +....+.+.|++.|+.|+.|...|++.+|++....
T Consensus 465 ~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~~l 519 (555)
T KOG1587|consen 465 NLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSESL 519 (555)
T ss_pred ceehhhhhccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCchh
Confidence 9999999875543333 2 46677888999999999999999999999997443
No 217
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.80 E-value=3e-18 Score=140.20 Aligned_cols=198 Identities=16% Similarity=0.160 Sum_probs=151.5
Q ss_pred eEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEE
Q 014755 94 AYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGV 172 (419)
Q Consensus 94 ~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~ 172 (419)
..++|+.+|..+++++.|+ .+++|+..+...+. ...|...|.++.|+|||+.|++.+.+ ..+||+.+++..+..
T Consensus 148 k~vaf~~~gs~latgg~dg-~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d----~~~VW~~~~g~~~a~ 222 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDG-TLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD----SARVWSVNTGAALAR 222 (398)
T ss_pred eEEEEcCCCCEeeeccccc-eEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC----ceEEEEeccCchhhh
Confidence 6799999999999999998 99999977765555 77888999999999999999999886 899999999976666
Q ss_pred Eecc--ccceeeeeECCCC---CeEEEEcCCCCceEEEEcC---CC-ceEEEEeecCCCCceeEEEEccCCCeEEEEEec
Q 014755 173 FAVD--TLDLADIEWSPDD---SAIVIWDSPLEYKVLIYSP---DG-RCLLKYQAYESGLGVKSISWSPCGQFLAVGSYD 243 (419)
Q Consensus 173 ~~~~--~~~v~~~~~~~~~---~~l~~~~~~~~~~i~~~d~---~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 243 (419)
.... +.....+.|+.|+ .+.+.......+.|..+++ .+ ..++..+.......|++++.+++|++++.|+.|
T Consensus 223 ~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~d 302 (398)
T KOG0771|consen 223 KTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMD 302 (398)
T ss_pred cCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccC
Confidence 5532 3346677787776 3333333444466666666 22 222222211122269999999999999999999
Q ss_pred CcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCC
Q 014755 244 QTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQ 323 (419)
Q Consensus 244 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (419)
|.|-|++..+.+.++-..
T Consensus 303 GsVai~~~~~lq~~~~vk-------------------------------------------------------------- 320 (398)
T KOG0771|consen 303 GSVAIYDAKSLQRLQYVK-------------------------------------------------------------- 320 (398)
T ss_pred CcEEEEEeceeeeeEeeh--------------------------------------------------------------
Confidence 999999988766655443
Q ss_pred CCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccC
Q 014755 324 KPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICR 366 (419)
Q Consensus 324 ~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~ 366 (419)
+.|...|+.+.|+||.+++++.+.+ ..+.+..+.-
T Consensus 321 ------~aH~~~VT~ltF~Pdsr~~~svSs~--~~~~v~~l~v 355 (398)
T KOG0771|consen 321 ------EAHLGFVTGLTFSPDSRYLASVSSD--NEAAVTKLAV 355 (398)
T ss_pred ------hhheeeeeeEEEcCCcCcccccccC--CceeEEEEee
Confidence 2478889999999999999998888 8888877654
No 218
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.80 E-value=3.1e-17 Score=138.23 Aligned_cols=270 Identities=14% Similarity=0.192 Sum_probs=177.8
Q ss_pred ceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceee-e---ecCCccEeEEEE-----CCCCCEEEEEecCCCeEEEEE
Q 014755 49 KISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCK-I---DEGLAGIAYARW-----SPDSRHILTTSDFQLRLTVWS 119 (419)
Q Consensus 49 ~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~-~---~~~~~~v~~~~~-----~~~~~~l~~~~~~~~~i~iwd 119 (419)
.+....++-.|++|...-.+ .+++|+...+..... + .-......|-+| .|.+--++.+-..+ .+.+.|
T Consensus 125 ~~~~~~~~~~gd~lcFnvg~--~lyv~~~~g~~~~~~pi~k~~y~gt~P~cHdfn~~~a~~~g~dllIGf~tG-qvq~id 201 (636)
T KOG2394|consen 125 IVTNTNQSGKGDRLCFNVGR--ELYVYSYRGAADLSKPIDKREYKGTSPTCHDFNSFTATPKGLDLLIGFTTG-QVQLID 201 (636)
T ss_pred ceeeccccCCCCEEEEecCC--eEEEEEccCcchhccchhhhcccCCCCceecccccccCCCCcceEEeeccC-ceEEec
Confidence 45566666678888887654 699999875422111 1 111112233344 34555666665555 888888
Q ss_pred cCCCeEEEe-----ccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEecccccee--eeeECCCCCeE
Q 014755 120 LLNTACVHV-----QSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLA--DIEWSPDDSAI 192 (419)
Q Consensus 120 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~--~~~~~~~~~~l 192 (419)
....+..++ ...+..++++.|-|.+..++.+..- .|.+++||... ..... +....+++..+
T Consensus 202 p~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~--sGnlyly~~~~----------~~~~t~p~~~~~k~~~~f 269 (636)
T KOG2394|consen 202 PINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHA--SGNLYLYDKEI----------VCGATAPSYQALKDGDQF 269 (636)
T ss_pred chhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEe--cCceEEeeccc----------cccCCCCcccccCCCCee
Confidence 766333221 2234678999999977554444432 28999998621 11111 11222445544
Q ss_pred EEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCcc
Q 014755 193 VIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFP 272 (419)
Q Consensus 193 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~ 272 (419)
.+...- ...+..++..+..... .|..++|+|||++||+.+.||.+||||..+.+.+..++
T Consensus 270 ~i~t~k-------sk~~rNPv~~w~~~~g--~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mk----------- 329 (636)
T KOG2394|consen 270 AILTSK-------SKKTRNPVARWHIGEG--SINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMK----------- 329 (636)
T ss_pred EEeeee-------ccccCCccceeEeccc--cccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHH-----------
Confidence 441110 0002244444444333 79999999999999999999999999988766655432
Q ss_pred ceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEec
Q 014755 273 AVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRN 352 (419)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 352 (419)
.--+...|++|||||+||++|+
T Consensus 330 ----------------------------------------------------------SYFGGLLCvcWSPDGKyIvtGG 351 (636)
T KOG2394|consen 330 ----------------------------------------------------------SYFGGLLCVCWSPDGKYIVTGG 351 (636)
T ss_pred ----------------------------------------------------------hhccceEEEEEcCCccEEEecC
Confidence 1224578999999999999999
Q ss_pred CCCCceEEEeeccCCCceeec-ccCCCeeEEEeCC-----------------------------------CC--------
Q 014755 353 DSMPTTLWIWDICRQEPAAIL-VQKDPIRAATWDP-----------------------------------TC-------- 388 (419)
Q Consensus 353 ~d~~~~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~-----------------------------------~~-------- 388 (419)
+| --|.||.+..++++..- +|.+.|+.|+|.| ++
T Consensus 352 ED--DLVtVwSf~erRVVARGqGHkSWVs~VaFDpytt~~ee~~~~~~~~~~~~~~~~~~~~r~~~~~S~~~~~~s~~~~ 429 (636)
T KOG2394|consen 352 ED--DLVTVWSFEERRVVARGQGHKSWVSVVAFDPYTTSTEEWNNFSGMDSTFSDVAHDFEIRANGTGSAEGCPLSSFNR 429 (636)
T ss_pred Cc--ceEEEEEeccceEEEeccccccceeeEeecccccccccccccccccccccchhcccccccCCCCCcCCCccccccc
Confidence 99 99999999999988665 6999999999972 01
Q ss_pred -----CeEEEEeCCCcEEEeecCCCeEEec
Q 014755 389 -----TRLVLCTGSSHLYMWTPSGAYCVSN 413 (419)
Q Consensus 389 -----~~l~s~~~dg~i~vw~~~~~~~~~~ 413 (419)
-.+.+.+.|-.+.+||+....+.+-
T Consensus 430 ~~~v~YRfGSVGqDTqlcLWDlteD~L~~~ 459 (636)
T KOG2394|consen 430 INSVTYRFGSVGQDTQLCLWDLTEDVLVPH 459 (636)
T ss_pred ccceEEEeecccccceEEEEecchhhcccC
Confidence 1467888999999999998777763
No 219
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.79 E-value=2.4e-16 Score=122.93 Aligned_cols=284 Identities=14% Similarity=0.249 Sum_probs=191.9
Q ss_pred EEEeecCcceeEEEEec--C-CCeEEEEecc---CCeEEEEEcc--CCcceee-eecCCccEeEEEECCCCC-----EEE
Q 014755 41 VQLFSCLDKISYIEWAL--D-SEYILCGLYK---RLMIQAWSLT--QPEWTCK-IDEGLAGIAYARWSPDSR-----HIL 106 (419)
Q Consensus 41 ~~~~~~~~~v~~~~~s~--~-~~~l~~~~~~---~g~i~iw~~~--~~~~~~~-~~~~~~~v~~~~~~~~~~-----~l~ 106 (419)
+..+...-++.++.||. + .-+||.|+.. .+.|.|..+. +++.+.. -..|.-+++.+.|.|+.. .|+
T Consensus 38 iy~Y~ap~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdlLA 117 (364)
T KOG0290|consen 38 IYTYNAPWPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDLLA 117 (364)
T ss_pred EEEecCCCceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcchhh
Confidence 34444556788999983 2 4467777743 2467776654 3443322 136778899999999863 455
Q ss_pred EEecCCCeEEEEEcCC--CeEEE---e-----ccCCCCeeeEEEccCC-CEEEEEeecCCCCeEEEEeccCCe---EEEE
Q 014755 107 TTSDFQLRLTVWSLLN--TACVH---V-----QSPKHASKGVAFTQDG-KFAAICTRRDCKDYINLLSCHTWE---IMGV 172 (419)
Q Consensus 107 ~~~~~~~~i~iwd~~~--~~~~~---~-----~~~~~~~~~~~~~~~~-~~l~~~~~~~~~g~v~i~d~~~~~---~~~~ 172 (419)
++++ .+++|.+.. .+... + ..+..+++++.|+.-. ++|.+.+-| -+..|||++++. ...+
T Consensus 118 Ts~D---~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiD---TTCTiWdie~~~~~~vkTQ 191 (364)
T KOG0290|consen 118 TSSD---FLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSID---TTCTIWDIETGVSGTVKTQ 191 (364)
T ss_pred cccC---eEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeeccc---CeEEEEEEeeccccceeeE
Confidence 5443 799999874 22111 1 2234567899998754 677777766 689999999863 4667
Q ss_pred EeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEE-EeecCCCCceeEEEEccCC-CeEEEEEec-CcEEE
Q 014755 173 FAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLK-YQAYESGLGVKSISWSPCG-QFLAVGSYD-QTLRV 248 (419)
Q Consensus 173 ~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~-~~~~~~~~~v~~~~~s~~~-~~l~~~~~d-~~i~v 248 (419)
+-.|+.+|..++|...+..++. +.+.||.+++||+ .-+.-.. ++......+...++|+++. +++|+-..| ..|.+
T Consensus 192 LIAHDKEV~DIaf~~~s~~~FA-SvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~i 270 (364)
T KOG0290|consen 192 LIAHDKEVYDIAFLKGSRDVFA-SVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVI 270 (364)
T ss_pred EEecCcceeEEEeccCccceEE-EecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEE
Confidence 8889999999999997766554 3677999999999 3222222 2222223478889998854 677776665 46888
Q ss_pred EEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCC
Q 014755 249 LNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTD 328 (419)
Q Consensus 249 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (419)
.|++... .+...
T Consensus 271 LDiR~P~--------------------------------------------------------------------tpva~ 282 (364)
T KOG0290|consen 271 LDIRVPC--------------------------------------------------------------------TPVAR 282 (364)
T ss_pred EEecCCC--------------------------------------------------------------------cceeh
Confidence 8876411 12223
Q ss_pred CCCCCcceEEEEEccC-CeEEEEecCCCCceEEEeeccCCC------ceeecccCCCeeEEEeCCC-CCeEEEEeCCCcE
Q 014755 329 KPNPKQGIGLMSWSSD-SQYICTRNDSMPTTLWIWDICRQE------PAAILVQKDPIRAATWDPT-CTRLVLCTGSSHL 400 (419)
Q Consensus 329 ~~~~~~~v~~~~~s~~-g~~l~~~~~d~~~~i~iwd~~~~~------~~~~~~~~~~v~~~~~s~~-~~~l~s~~~dg~i 400 (419)
+.+|.+.|+.++|.|. ...|+++++| ..+.|||+.+.- ++..+...+.|+.+.|++. ..+++.+.. +++
T Consensus 283 L~~H~a~VNgIaWaPhS~~hictaGDD--~qaliWDl~q~~~~~~~dPilay~a~~EVNqi~Ws~~~~Dwiai~~~-kkl 359 (364)
T KOG0290|consen 283 LRNHQASVNGIAWAPHSSSHICTAGDD--CQALIWDLQQMPRENGEDPILAYTAGGEVNQIQWSSSQPDWIAICFG-KKL 359 (364)
T ss_pred hhcCcccccceEecCCCCceeeecCCc--ceEEEEecccccccCCCCchhhhhccceeeeeeecccCCCEEEEEec-Cee
Confidence 4579999999999996 5688999998 999999998632 2222346778999999964 457776654 444
Q ss_pred EE
Q 014755 401 YM 402 (419)
Q Consensus 401 ~v 402 (419)
.+
T Consensus 360 ei 361 (364)
T KOG0290|consen 360 EI 361 (364)
T ss_pred eE
Confidence 43
No 220
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.79 E-value=7.4e-17 Score=143.16 Aligned_cols=261 Identities=13% Similarity=0.143 Sum_probs=183.4
Q ss_pred eEEEEecCCC-cEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcc--eee----eecCCccEeEEEECCC
Q 014755 29 RLVVRDAHSF-KVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEW--TCK----IDEGLAGIAYARWSPD 101 (419)
Q Consensus 29 ~i~i~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~--~~~----~~~~~~~v~~~~~~~~ 101 (419)
.+.+|++... .+...+.....|.++.|+|....+++|+..+|.|.+||+..+.. ... ...|..+++.+.|..+
T Consensus 223 ~~~vW~~~~p~~Pe~~~~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~ 302 (555)
T KOG1587|consen 223 VLLVWSLKNPNTPELVLESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQN 302 (555)
T ss_pred eEEEEecCCCCCceEEEecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEecc
Confidence 4789999876 55566777889999999996655555555559999999987754 222 3357788999999775
Q ss_pred CCE--EEEEecCCCeEEEEEcCCCeE-EE-----ec-------cCCCCeeeEEEccCC-CEEEEEeecCCCCeEEEEecc
Q 014755 102 SRH--ILTTSDFQLRLTVWSLLNTAC-VH-----VQ-------SPKHASKGVAFTQDG-KFAAICTRRDCKDYINLLSCH 165 (419)
Q Consensus 102 ~~~--l~~~~~~~~~i~iwd~~~~~~-~~-----~~-------~~~~~~~~~~~~~~~-~~l~~~~~~~~~g~v~i~d~~ 165 (419)
... +++++.|+ .|..|+++.-.. .. .. .....+++++|.+.. ..+++|+.. |.|.--+..
T Consensus 303 ~~~~~f~s~ssDG-~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~---G~v~~~~r~ 378 (555)
T KOG1587|consen 303 EHNTEFFSLSSDG-SICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEE---GKVYKGCRK 378 (555)
T ss_pred CCCCceEEEecCC-cEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCC---cEEEEEecc
Confidence 544 99999987 999998875221 11 11 122345889998866 556666665 777763332
Q ss_pred C---C-----eEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCC--CceEEEEeecCCCCceeEEEEccCCC
Q 014755 166 T---W-----EIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPD--GRCLLKYQAYESGLGVKSISWSPCGQ 235 (419)
Q Consensus 166 ~---~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~--~~~~~~~~~~~~~~~v~~~~~s~~~~ 235 (419)
. . +....+..|.++|+.+.++|=+..++.. ..|..+++|+.. ..++..+..+.. .+++++|||...
T Consensus 379 g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls--~gDW~vriWs~~~~~~Pl~~~~~~~~--~v~~vaWSptrp 454 (555)
T KOG1587|consen 379 GYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLS--VGDWTVRIWSEDVIASPLLSLDSSPD--YVTDVAWSPTRP 454 (555)
T ss_pred CCcccccccccccccccccCcceEeeecCCCccceeee--eccceeEeccccCCCCcchhhhhccc--eeeeeEEcCcCc
Confidence 2 1 1233456688999999999998888773 449999999983 344444444333 699999999764
Q ss_pred -eEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEec
Q 014755 236 -FLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVM 314 (419)
Q Consensus 236 -~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (419)
.++++..||.|.+||+.....-....
T Consensus 455 avF~~~d~~G~l~iWDLl~~~~~Pv~s----------------------------------------------------- 481 (555)
T KOG1587|consen 455 AVFATVDGDGNLDIWDLLQDDEEPVLS----------------------------------------------------- 481 (555)
T ss_pred eEEEEEcCCCceehhhhhccccCCccc-----------------------------------------------------
Confidence 67777889999999986432211110
Q ss_pred cCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccC
Q 014755 315 EIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICR 366 (419)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~ 366 (419)
..-+....+.+.|+++|+.|++|... |++++|++..
T Consensus 482 --------------~~~~~~~l~~~~~s~~g~~lavGd~~--G~~~~~~l~~ 517 (555)
T KOG1587|consen 482 --------------QKVCSPALTRVRWSPNGKLLAVGDAN--GTTHILKLSE 517 (555)
T ss_pred --------------ccccccccceeecCCCCcEEEEecCC--CcEEEEEcCc
Confidence 00012235678899999999999998 9999999864
No 221
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.79 E-value=2.6e-16 Score=141.51 Aligned_cols=219 Identities=16% Similarity=0.104 Sum_probs=155.3
Q ss_pred eEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccC--CeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEE
Q 014755 29 RLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKR--LMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHIL 106 (419)
Q Consensus 29 ~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~--g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 106 (419)
.|.++|.+++.......+...+...+|+|||+.|++.+.++ ..|.+|++.+++.. .+....+.+....|+|||+.|+
T Consensus 180 ~l~~~d~~g~~~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~-~l~~~~g~~~~~~~SpDG~~la 258 (430)
T PRK00178 180 TLQRSDYDGARAVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRRE-QITNFEGLNGAPAWSPDGSKLA 258 (430)
T ss_pred EEEEECCCCCCceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEE-EccCCCCCcCCeEECCCCCEEE
Confidence 48888988877777777888899999999999999877543 36899999888643 3444444556789999999988
Q ss_pred EEecCC--CeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeee
Q 014755 107 TTSDFQ--LRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIE 184 (419)
Q Consensus 107 ~~~~~~--~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~ 184 (419)
.....+ ..|+++|+.+++...+..+........|+|||+.|++.+...+...|+++++.+++..+.. ..........
T Consensus 259 ~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt-~~~~~~~~~~ 337 (430)
T PRK00178 259 FVLSKDGNPEIYVMDLASRQLSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVT-FVGNYNARPR 337 (430)
T ss_pred EEEccCCCceEEEEECCCCCeEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEee-cCCCCccceE
Confidence 654322 2688899999887776655555678899999999988876544457888898877654332 2223344678
Q ss_pred ECCCCCeEEEEcCC-CCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEec---CcEEEEEcC
Q 014755 185 WSPDDSAIVIWDSP-LEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYD---QTLRVLNHL 252 (419)
Q Consensus 185 ~~~~~~~l~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---~~i~v~d~~ 252 (419)
|+|+|+.+++.... ....|.++|+.+.....+.... ......|+|||+.++..+.+ ..|.++++.
T Consensus 338 ~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~~lt~~~---~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~ 406 (430)
T PRK00178 338 LSADGKTLVMVHRQDGNFHVAAQDLQRGSVRILTDTS---LDESPSVAPNGTMLIYATRQQGRGVLMLVSIN 406 (430)
T ss_pred ECCCCCEEEEEEccCCceEEEEEECCCCCEEEccCCC---CCCCceECCCCCEEEEEEecCCceEEEEEECC
Confidence 99999999875432 1246889999443344443321 23356899999999887754 246666664
No 222
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.79 E-value=7.1e-17 Score=144.38 Aligned_cols=217 Identities=18% Similarity=0.163 Sum_probs=152.8
Q ss_pred CeEEcCCCCEEEEEe--CC--eEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCC--eEEEEEccCCcceee
Q 014755 12 PSCFSPNARYIAVAV--DY--RLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRL--MIQAWSLTQPEWTCK 85 (419)
Q Consensus 12 ~~~~s~d~~~la~~~--~~--~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g--~i~iw~~~~~~~~~~ 85 (419)
..+|||||+.|++.+ ++ .|++||+.+++........+.....+|+|||+.|+.....+| .|+++|+.+++. ..
T Consensus 222 ~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~-~~ 300 (448)
T PRK04792 222 SPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKAL-TR 300 (448)
T ss_pred CceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCe-EE
Confidence 368999999999886 22 489999998887665444445568899999999987654445 478888887764 45
Q ss_pred eecCCccEeEEEECCCCCEEEEEecCC--CeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEe
Q 014755 86 IDEGLAGIAYARWSPDSRHILTTSDFQ--LRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLS 163 (419)
Q Consensus 86 ~~~~~~~v~~~~~~~~~~~l~~~~~~~--~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d 163 (419)
+..+........|+|||+.|+..+..+ ..|.++|+.+++...+..........+|+|||++|+..+.+.+...|.++|
T Consensus 301 lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~d 380 (448)
T PRK04792 301 ITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTFEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQD 380 (448)
T ss_pred CccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEecCCCCCcCeeECCCCCEEEEEEecCCceEEEEEE
Confidence 555555667889999999998876532 257777888887766543333445679999999999887654334677789
Q ss_pred ccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCC-CceEEEEcCCCceEEEEeecCCCCceeEEEEccC
Q 014755 164 CHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPL-EYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPC 233 (419)
Q Consensus 164 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~ 233 (419)
+.+++... +... .......|+|||+.+++..... ...+++++.+|.....+..... .+...+|+|-
T Consensus 381 l~~g~~~~-lt~~-~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~~G~~~~~l~~~~g--~~~~p~Wsp~ 447 (448)
T PRK04792 381 LETGAMQV-LTST-RLDESPSVAPNGTMVIYSTTYQGKQVLAAVSIDGRFKARLPAGQG--EVKSPAWSPF 447 (448)
T ss_pred CCCCCeEE-ccCC-CCCCCceECCCCCEEEEEEecCCceEEEEEECCCCceEECcCCCC--CcCCCccCCC
Confidence 88876533 3222 1223568999999988743322 2458888888887777765433 5777888873
No 223
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.79 E-value=4e-16 Score=138.43 Aligned_cols=246 Identities=15% Similarity=0.123 Sum_probs=161.5
Q ss_pred CeEEEEEccCCcceeeeecCCccEeEEEECCCCCE--EEEEecC--CCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCC
Q 014755 70 LMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRH--ILTTSDF--QLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGK 145 (419)
Q Consensus 70 g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~~~~~~--~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (419)
..|.+.|.+.++ .+.+..........+|+|||+. ++..+.. ...|.+.++.+++...+..........+|+|||+
T Consensus 165 ~~l~~~d~dG~~-~~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~g~~~~p~wSPDG~ 243 (428)
T PRK01029 165 GELWSVDYDGQN-LRPLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILALQGNQLMPTFSPRKK 243 (428)
T ss_pred ceEEEEcCCCCC-ceEcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeecCCCCccceEECCCCC
Confidence 367777876554 3456666667788999999986 3333322 2368888999988777666666667899999999
Q ss_pred EEEEEeecCCCCeE--EEEeccCC---eEEEEEeccccceeeeeECCCCCeEEEEcC-CCCceEEEEcCC--CceEEEEe
Q 014755 146 FAAICTRRDCKDYI--NLLSCHTW---EIMGVFAVDTLDLADIEWSPDDSAIVIWDS-PLEYKVLIYSPD--GRCLLKYQ 217 (419)
Q Consensus 146 ~l~~~~~~~~~g~v--~i~d~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~~~i~~~d~~--~~~~~~~~ 217 (419)
.|+......+...+ .+|++..+ +..+............+|+|||+.|++... .....|++++++ +.....+.
T Consensus 244 ~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt 323 (428)
T PRK01029 244 LLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLT 323 (428)
T ss_pred EEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEec
Confidence 99987643222234 44676652 333333222234467899999998886432 222356666663 33344444
Q ss_pred ecCCCCceeEEEEccCCCeEEEEEec---CcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCc
Q 014755 218 AYESGLGVKSISWSPCGQFLAVGSYD---QTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDD 294 (419)
Q Consensus 218 ~~~~~~~v~~~~~s~~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (419)
.... .+....|+|||+.|+..+.+ ..|++||+.+++......
T Consensus 324 ~~~~--~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~--------------------------------- 368 (428)
T PRK01029 324 KKYR--NSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTT--------------------------------- 368 (428)
T ss_pred cCCC--CccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccC---------------------------------
Confidence 3332 56789999999999877653 368999988776532211
Q ss_pred cccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecC-CCCceEEEeeccCCCceeec
Q 014755 295 FIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRND-SMPTTLWIWDICRQEPAAIL 373 (419)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-d~~~~i~iwd~~~~~~~~~~ 373 (419)
....+....|+|||+.|+.... .....|+++|+.+++...+.
T Consensus 369 -------------------------------------~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt 411 (428)
T PRK01029 369 -------------------------------------SPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTRKIV 411 (428)
T ss_pred -------------------------------------CCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEee
Confidence 0112356789999998875432 22267999999988877776
Q ss_pred ccCCCeeEEEeCCCC
Q 014755 374 VQKDPIRAATWDPTC 388 (419)
Q Consensus 374 ~~~~~v~~~~~s~~~ 388 (419)
...+.+...+|+|-.
T Consensus 412 ~~~g~~~~p~Ws~~~ 426 (428)
T PRK01029 412 IGSGEKRFPSWGAFP 426 (428)
T ss_pred cCCCcccCceecCCC
Confidence 666677888998754
No 224
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.79 E-value=7.6e-17 Score=136.37 Aligned_cols=224 Identities=15% Similarity=0.185 Sum_probs=148.9
Q ss_pred hhcccccC---eEEcCCCCEEEEEeCC-eEEEEecCCCcEEEEe--ecCcceeEEEEec--CCCeEEEEeccCCeEEEEE
Q 014755 5 EAYKQTGP---SCFSPNARYIAVAVDY-RLVVRDAHSFKVVQLF--SCLDKISYIEWAL--DSEYILCGLYKRLMIQAWS 76 (419)
Q Consensus 5 ~~~~~~~~---~~~s~d~~~la~~~~~-~i~i~~~~~~~~~~~~--~~~~~v~~~~~s~--~~~~l~~~~~~~g~i~iw~ 76 (419)
++.||.++ +.|+.||.+||+|||+ .+.|||.-..+++..+ +|...|.++.|-| +.+.+++|..| ..|+++|
T Consensus 45 eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgD-k~i~lfd 123 (758)
T KOG1310|consen 45 ELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGD-KLIKLFD 123 (758)
T ss_pred hhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCc-ceEEEEe
Confidence 45678777 7899999999999955 5999999988888765 4999999999999 45677888877 6999999
Q ss_pred ccCC----------cceeeeecCCccEeEEEECCCC-CEEEEEecCCCeEEEEEcCCCe-------EEE--eccCC--CC
Q 014755 77 LTQP----------EWTCKIDEGLAGIAYARWSPDS-RHILTTSDFQLRLTVWSLLNTA-------CVH--VQSPK--HA 134 (419)
Q Consensus 77 ~~~~----------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~~i~iwd~~~~~-------~~~--~~~~~--~~ 134 (419)
+... +.......|...|..++-.|++ ..+.++++|+ +++-+|++... +.. ..... -.
T Consensus 124 l~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDG-tirQyDiREph~c~p~~~~~~~l~ny~~~lie 202 (758)
T KOG1310|consen 124 LDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDG-TIRQYDIREPHVCNPDEDCPSILVNYNPQLIE 202 (758)
T ss_pred cccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCc-ceeeecccCCccCCccccccHHHHHhchhhhe
Confidence 9842 2233455688889999999998 6677788887 99999998621 111 11111 23
Q ss_pred eeeEEEccCC-CEEEEEeecCCCCeEEEEeccCCeEEEEEec-------cccceeeee-ECCCCCeEEEEcCCCCceEEE
Q 014755 135 SKGVAFTQDG-KFAAICTRRDCKDYINLLSCHTWEIMGVFAV-------DTLDLADIE-WSPDDSAIVIWDSPLEYKVLI 205 (419)
Q Consensus 135 ~~~~~~~~~~-~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~-------~~~~v~~~~-~~~~~~~l~~~~~~~~~~i~~ 205 (419)
..++.++|.. .+|++|+.+ -..++||.+... ..+.. ......|+. |+|.+- .
T Consensus 203 lk~ltisp~rp~~laVGgsd---pfarLYD~Rr~l--ks~~s~~~~~~~pp~~~~cv~yf~p~hl--k------------ 263 (758)
T KOG1310|consen 203 LKCLTISPSRPYYLAVGGSD---PFARLYDRRRVL--KSFRSDGTMNTCPPKDCRCVRYFSPGHL--K------------ 263 (758)
T ss_pred eeeeeecCCCCceEEecCCC---chhhhhhhhhhc--cCCCCCccccCCCCcccchhheecCccc--c------------
Confidence 4789999977 567777765 689999964311 11111 011111221 122111 0
Q ss_pred EcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCcee
Q 014755 206 YSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKT 256 (419)
Q Consensus 206 ~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~ 256 (419)
+..|....... .++-++|+|+|.-|+..-....|+++|+..++.
T Consensus 264 -n~~gn~~~~~~------~~t~vtfnpNGtElLvs~~gEhVYlfdvn~~~~ 307 (758)
T KOG1310|consen 264 -NSQGNLDRYIT------CCTYVTFNPNGTELLVSWGGEHVYLFDVNEDKS 307 (758)
T ss_pred -Cccccccccee------eeEEEEECCCCcEEEEeeCCeEEEEEeecCCCC
Confidence 00111111111 367789999997666554445899999876653
No 225
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.79 E-value=4.3e-14 Score=122.65 Aligned_cols=286 Identities=13% Similarity=0.126 Sum_probs=186.9
Q ss_pred CeEEEEec--CCCcEEE--EeecCcceeEEEEecCCCeEEEEec---cCCeEEEEEccCC--cc--eeeeecCCccEeEE
Q 014755 28 YRLVVRDA--HSFKVVQ--LFSCLDKISYIEWALDSEYILCGLY---KRLMIQAWSLTQP--EW--TCKIDEGLAGIAYA 96 (419)
Q Consensus 28 ~~i~i~~~--~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~~---~~g~i~iw~~~~~--~~--~~~~~~~~~~v~~~ 96 (419)
+.|.+|++ +++++.. ..........++++|++++|.+... +.|.|..|++... ++ +............+
T Consensus 13 ~gI~~~~~d~~~g~l~~~~~~~~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i 92 (345)
T PF10282_consen 13 GGIYVFRFDEETGTLTLVQTVAEGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHI 92 (345)
T ss_dssp TEEEEEEEETTTTEEEEEEEEEESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEE
T ss_pred CcEEEEEEcCCCCCceEeeeecCCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEE
Confidence 56888876 5665543 3335566788999999999999876 4579999998764 22 22333233456789
Q ss_pred EECCCCCEEEEEecCCCeEEEEEcCC-CeEEEe---c-----------cCCCCeeeEEEccCCCEEEEEeecCCCCeEEE
Q 014755 97 RWSPDSRHILTTSDFQLRLTVWSLLN-TACVHV---Q-----------SPKHASKGVAFTQDGKFAAICTRRDCKDYINL 161 (419)
Q Consensus 97 ~~~~~~~~l~~~~~~~~~i~iwd~~~-~~~~~~---~-----------~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i 161 (419)
+++|++++|+++...++.+.++++.. +..... . .......++.++|+++++++.... ...|++
T Consensus 93 ~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG--~D~v~~ 170 (345)
T PF10282_consen 93 AVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLG--ADRVYV 170 (345)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETT--TTEEEE
T ss_pred EEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecC--CCEEEE
Confidence 99999999999987777999999987 443331 1 122345889999999999887643 358999
Q ss_pred EeccCCe--EEE--EEe-ccccceeeeeECCCCCeEEEEcCCCCceEEEEcCC--CceEE---EEeec----CCCCceeE
Q 014755 162 LSCHTWE--IMG--VFA-VDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPD--GRCLL---KYQAY----ESGLGVKS 227 (419)
Q Consensus 162 ~d~~~~~--~~~--~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~--~~~~~---~~~~~----~~~~~v~~ 227 (419)
|+++... +.. .+. ......+.+.|+|+++++++.. ..++.|.+++.. ...+. .+... ........
T Consensus 171 ~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~-e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 249 (345)
T PF10282_consen 171 YDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVN-ELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAE 249 (345)
T ss_dssp EEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEE-TTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEE
T ss_pred EEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEec-CCCCcEEEEeecccCCceeEEEEeeeccccccccCCcee
Confidence 9997654 322 222 2335678999999999988764 457889888873 22222 22211 11125788
Q ss_pred EEEccCCCeEEEEE-ecCcEEEEEcCC--ceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccC
Q 014755 228 ISWSPCGQFLAVGS-YDQTLRVLNHLT--WKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATN 304 (419)
Q Consensus 228 ~~~s~~~~~l~~~~-~d~~i~v~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (419)
++++|||++|+++. ..++|.+|++.. ++ +..+... .
T Consensus 250 i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~-l~~~~~~------------~---------------------------- 288 (345)
T PF10282_consen 250 IAISPDGRFLYVSNRGSNSISVFDLDPATGT-LTLVQTV------------P---------------------------- 288 (345)
T ss_dssp EEE-TTSSEEEEEECTTTEEEEEEECTTTTT-EEEEEEE------------E----------------------------
T ss_pred EEEecCCCEEEEEeccCCEEEEEEEecCCCc-eEEEEEE------------e----------------------------
Confidence 99999999988766 456899999832 22 2221100 0
Q ss_pred CceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeecc--CCCceeecc--cCCCee
Q 014755 305 GHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDIC--RQEPAAILV--QKDPIR 380 (419)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~--~~~~~~~~~--~~~~v~ 380 (419)
........++++|+|++|+++..+ ++.|.+|+++ +|.+..... .-....
T Consensus 289 --------------------------~~G~~Pr~~~~s~~g~~l~Va~~~-s~~v~vf~~d~~tG~l~~~~~~~~~~~p~ 341 (345)
T PF10282_consen 289 --------------------------TGGKFPRHFAFSPDGRYLYVANQD-SNTVSVFDIDPDTGKLTPVGSSVPIPSPV 341 (345)
T ss_dssp --------------------------ESSSSEEEEEE-TTSSEEEEEETT-TTEEEEEEEETTTTEEEEEEEEEESSSEE
T ss_pred --------------------------CCCCCccEEEEeCCCCEEEEEecC-CCeEEEEEEeCCCCcEEEecccccCCCCE
Confidence 011124789999999999988764 4889999774 566555442 445566
Q ss_pred EEEe
Q 014755 381 AATW 384 (419)
Q Consensus 381 ~~~~ 384 (419)
|+.|
T Consensus 342 ci~f 345 (345)
T PF10282_consen 342 CIVF 345 (345)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 6665
No 226
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.79 E-value=2.2e-17 Score=129.60 Aligned_cols=164 Identities=18% Similarity=0.372 Sum_probs=118.9
Q ss_pred eeeeECCCCCeEEEEcCC---C-------CceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEE--EecCcEEE
Q 014755 181 ADIEWSPDDSAIVIWDSP---L-------EYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVG--SYDQTLRV 248 (419)
Q Consensus 181 ~~~~~~~~~~~l~~~~~~---~-------~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~--~~d~~i~v 248 (419)
..+.|+|+|.+|++.... . ...++.++..+.....+..... .+|.+++|+|+|+.+++. ..++.|.+
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~-~~I~~~~WsP~g~~favi~g~~~~~v~l 87 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKE-GPIHDVAWSPNGNEFAVIYGSMPAKVTL 87 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCC-CceEEEEECcCCCEEEEEEccCCcccEE
Confidence 457899999988763221 0 1234444444455555544332 269999999999987654 35679999
Q ss_pred EEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCC
Q 014755 249 LNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTD 328 (419)
Q Consensus 249 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (419)
||++ ++.+..+.
T Consensus 88 yd~~-~~~i~~~~------------------------------------------------------------------- 99 (194)
T PF08662_consen 88 YDVK-GKKIFSFG------------------------------------------------------------------- 99 (194)
T ss_pred EcCc-ccEeEeec-------------------------------------------------------------------
Confidence 9986 44444432
Q ss_pred CCCCCcceEEEEEccCCeEEEEecCC-CCceEEEeeccCCCceeecccCCCeeEEEeCCCCCeEEEEeC------CCcEE
Q 014755 329 KPNPKQGIGLMSWSSDSQYICTRNDS-MPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCTRLVLCTG------SSHLY 401 (419)
Q Consensus 329 ~~~~~~~v~~~~~s~~g~~l~~~~~d-~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~------dg~i~ 401 (419)
...+..+.|||+|++|++++.+ .+|.|.+||.++.+.+....|.. ++.++|+|||++|++++. |..++
T Consensus 100 ----~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~~~-~t~~~WsPdGr~~~ta~t~~r~~~dng~~ 174 (194)
T PF08662_consen 100 ----TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEHSD-ATDVEWSPDGRYLATATTSPRLRVDNGFK 174 (194)
T ss_pred ----CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccccCc-EEEEEEcCCCCEEEEEEeccceeccccEE
Confidence 2235789999999999998642 34789999999888877776654 789999999999998864 78999
Q ss_pred EeecCCCeEEecCCCCC
Q 014755 402 MWTPSGAYCVSNPLPQF 418 (419)
Q Consensus 402 vw~~~~~~~~~~~~~~f 418 (419)
||+..+.++.+.+.+.|
T Consensus 175 Iw~~~G~~l~~~~~~~l 191 (194)
T PF08662_consen 175 IWSFQGRLLYKKPFDEL 191 (194)
T ss_pred EEEecCeEeEecchhhh
Confidence 99999888888877643
No 227
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.79 E-value=6.1e-17 Score=127.85 Aligned_cols=201 Identities=17% Similarity=0.225 Sum_probs=160.0
Q ss_pred cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCc---ceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEc-C
Q 014755 46 CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPE---WTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSL-L 121 (419)
Q Consensus 46 ~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~-~ 121 (419)
...+|+|.+|++|+..+|++... ..|.||...... ...++..|...|+.+.|+|..+.|++++.|+ .-++|.. .
T Consensus 9 ~~~pitchAwn~drt~iAv~~~~-~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~dr-nayVw~~~~ 86 (361)
T KOG1523|consen 9 LLEPITCHAWNSDRTQIAVSPNN-HEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDR-NAYVWTQPS 86 (361)
T ss_pred ccCceeeeeecCCCceEEeccCC-ceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCC-CccccccCC
Confidence 45799999999999999999866 689999987765 4567889999999999999999999999998 8999998 4
Q ss_pred CCeEEE---eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeE----EEEEeccccceeeeeECCCCCeEEE
Q 014755 122 NTACVH---VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEI----MGVFAVDTLDLADIEWSPDDSAIVI 194 (419)
Q Consensus 122 ~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~ 194 (419)
.++... +..+....+++.|+|.++.+++++.. ..|.+|-.+..+- ...-+.+...|.++.|+|++-+++.
T Consensus 87 ~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSga---r~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaa 163 (361)
T KOG1523|consen 87 GGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGA---RLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAA 163 (361)
T ss_pred CCeeccceeEEEeccceeeEeecCcCceEEeccCc---cEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecc
Confidence 554433 56677888999999999999999864 6788877654221 1222345678999999999999988
Q ss_pred EcCCCCceEEEEcC--CC-----------------ceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCce
Q 014755 195 WDSPLEYKVLIYSP--DG-----------------RCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWK 255 (419)
Q Consensus 195 ~~~~~~~~i~~~d~--~~-----------------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~ 255 (419)
++.|++.++|+. .+ +++..+. ...+.+..+.|+|+|..|+..+.|.++.+-|.....
T Consensus 164 --Gs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~--~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~ 239 (361)
T KOG1523|consen 164 --GSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEAS--SSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPS 239 (361)
T ss_pred --cccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhc--cCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCc
Confidence 788999999885 11 1122222 223489999999999999999999999998876543
No 228
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.78 E-value=3.2e-16 Score=119.13 Aligned_cols=222 Identities=12% Similarity=0.102 Sum_probs=167.1
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCC---------Cc--EEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHS---------FK--VVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP 80 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~---------~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~ 80 (419)
-++||.+++|++|+ +|+|.+..+.+ ++ .+....|.++|+.++|. .++|++++ | |.|+=|..+..
T Consensus 16 qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~g-d-G~V~gw~W~E~ 91 (325)
T KOG0649|consen 16 QAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGG-D-GLVYGWEWNEE 91 (325)
T ss_pred HhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeecc-C-ceEEEeeehhh
Confidence 47999999999997 89999987753 12 22334699999999999 44777776 5 89999987643
Q ss_pred cc--------eeeeecCC-----ccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCE
Q 014755 81 EW--------TCKIDEGL-----AGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKF 146 (419)
Q Consensus 81 ~~--------~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 146 (419)
.. ......+. ..|+++-..|....+++++.|+ .++-||+++|+..+ +.+|...+.++.-......
T Consensus 92 ~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~-~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~q 170 (325)
T KOG0649|consen 92 EESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDG-VIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQ 170 (325)
T ss_pred hhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCe-EEEEEEecCCEEEEEEcCCcceeeeeeecccCcc
Confidence 21 11111222 3588999999888888888887 99999999999998 9999999999998666678
Q ss_pred EEEEeecCCCCeEEEEeccCCeEEEEEeccc----------cceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEE
Q 014755 147 AAICTRRDCKDYINLLSCHTWEIMGVFAVDT----------LDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLK 215 (419)
Q Consensus 147 l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~----------~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~ 215 (419)
+++|++| |++++||.++++.+..+.... ..|.+++ -+..++++ +....+.+|.+ ..++...
T Consensus 171 ilsG~ED---GtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala--~~edWlvC---GgGp~lslwhLrsse~t~v 242 (325)
T KOG0649|consen 171 ILSGAED---GTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALA--VNEDWLVC---GGGPKLSLWHLRSSESTCV 242 (325)
T ss_pred eeecCCC---ccEEEEeccccceeEEeccccChhhcCcccCceeEEEe--ccCceEEe---cCCCceeEEeccCCCceEE
Confidence 8899987 999999999999988775432 2244444 34556665 44678999999 6666666
Q ss_pred EeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcC
Q 014755 216 YQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHL 252 (419)
Q Consensus 216 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~ 252 (419)
+.... .+..+.|..| .+++++..+.|.-|.+.
T Consensus 243 fpipa---~v~~v~F~~d--~vl~~G~g~~v~~~~l~ 274 (325)
T KOG0649|consen 243 FPIPA---RVHLVDFVDD--CVLIGGEGNHVQSYTLN 274 (325)
T ss_pred Eeccc---ceeEeeeecc--eEEEeccccceeeeeec
Confidence 66544 5888888654 77778877788888764
No 229
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.78 E-value=3.8e-15 Score=124.12 Aligned_cols=364 Identities=13% Similarity=0.108 Sum_probs=205.6
Q ss_pred EcCC--CCEEEEEeCCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEE------eccCCeEEEEEccCCcceeee
Q 014755 15 FSPN--ARYIAVAVDYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCG------LYKRLMIQAWSLTQPEWTCKI 86 (419)
Q Consensus 15 ~s~d--~~~la~~~~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~------~~~~g~i~iw~~~~~~~~~~~ 86 (419)
..|| |..|...+.+.++.+++.+++..++..|-+-|+...|+|+|+.+|.. +.+.+.+.+.+.++|+..+..
T Consensus 44 l~PDI~GD~IiFt~~DdlWe~slk~g~~~ritS~lGVvnn~kf~pdGrkvaf~rv~~~ss~~taDly~v~~e~Ge~kRiT 123 (668)
T COG4946 44 LNPDIYGDRIIFTCCDDLWEYSLKDGKPLRITSGLGVVNNPKFSPDGRKVAFSRVMLGSSLQTADLYVVPSEDGEAKRIT 123 (668)
T ss_pred cCCcccCcEEEEEechHHHHhhhccCCeeEEecccceeccccCCCCCcEEEEEEEEecCCCccccEEEEeCCCCcEEEEE
Confidence 4664 77888888777999999999999999999999999999999999872 223356888888998765432
Q ss_pred ecCCccEeE-EEECCCCCEEEEEecCCC---eEEEEEcC--CCeEEEecc---------------------------CCC
Q 014755 87 DEGLAGIAY-ARWSPDSRHILTTSDFQL---RLTVWSLL--NTACVHVQS---------------------------PKH 133 (419)
Q Consensus 87 ~~~~~~v~~-~~~~~~~~~l~~~~~~~~---~i~iwd~~--~~~~~~~~~---------------------------~~~ 133 (419)
-.....+. .-|.|||+.+++...... --.+|.+. ..+...+.. -++
T Consensus 124 -yfGr~fT~VaG~~~dg~iiV~TD~~tPF~q~~~lYkv~~dg~~~e~LnlGpathiv~~dg~ivigRntydLP~WK~YkG 202 (668)
T COG4946 124 -YFGRRFTRVAGWIPDGEIIVSTDFHTPFSQWTELYKVNVDGIKTEPLNLGPATHIVIKDGIIVIGRNTYDLPHWKGYKG 202 (668)
T ss_pred -EeccccceeeccCCCCCEEEEeccCCCcccceeeeEEccCCceeeeccCCceeeEEEeCCEEEEccCcccCcccccccC
Confidence 22233333 459999998887643210 01122211 111111000 000
Q ss_pred CeeeEEE-ccC---------------------CCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCe
Q 014755 134 ASKGVAF-TQD---------------------GKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSA 191 (419)
Q Consensus 134 ~~~~~~~-~~~---------------------~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 191 (419)
.....-| +.+ +..+..-+.-++.|.++--|+......+....++. .+-..+.||+.
T Consensus 203 GtrGklWis~d~g~tFeK~vdl~~~vS~PmIV~~RvYFlsD~eG~GnlYSvdldGkDlrrHTnFtdY--Y~R~~nsDGkr 280 (668)
T COG4946 203 GTRGKLWISSDGGKTFEKFVDLDGNVSSPMIVGERVYFLSDHEGVGNLYSVDLDGKDLRRHTNFTDY--YPRNANSDGKR 280 (668)
T ss_pred CccceEEEEecCCcceeeeeecCCCcCCceEEcceEEEEecccCccceEEeccCCchhhhcCCchhc--cccccCCCCcE
Confidence 0011111 001 11222222223334444444443222222222221 22234568999
Q ss_pred EEEEcCCCCceEEEEcCCCceEEEEeecC--C-----CCce---eEEE-Ecc-CCCeEEEEEecCcEEEEEcCCceeeee
Q 014755 192 IVIWDSPLEYKVLIYSPDGRCLLKYQAYE--S-----GLGV---KSIS-WSP-CGQFLAVGSYDQTLRVLNHLTWKTFAE 259 (419)
Q Consensus 192 l~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~-----~~~v---~~~~-~s~-~~~~l~~~~~d~~i~v~d~~~~~~~~~ 259 (419)
+++ +..|.|++||++...+..+...- . ...+ .-+. |++ +|.+++..|. |...+.+...+-.++.
T Consensus 281 IvF---q~~GdIylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSR-GkaFi~~~~~~~~iqv 356 (668)
T COG4946 281 IVF---QNAGDIYLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSR-GKAFIMRPWDGYSIQV 356 (668)
T ss_pred EEE---ecCCcEEEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEec-CcEEEECCCCCeeEEc
Confidence 887 44789999999555555554320 0 0001 1111 333 5677777775 4555555443332222
Q ss_pred ecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEE
Q 014755 260 FMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLM 339 (419)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 339 (419)
-.... +.+.. .............+|....+|+......+. ....-+.|.++
T Consensus 357 ~~~~~--------VrY~r-------------~~~~~e~~vigt~dgD~l~iyd~~~~e~kr--------~e~~lg~I~av 407 (668)
T COG4946 357 GKKGG--------VRYRR-------------IQVDPEGDVIGTNDGDKLGIYDKDGGEVKR--------IEKDLGNIEAV 407 (668)
T ss_pred CCCCc--------eEEEE-------------EccCCcceEEeccCCceEEEEecCCceEEE--------eeCCccceEEE
Confidence 21100 00000 000000011112223333333322211100 11244568999
Q ss_pred EEccCCeEEEEecCCCCceEEEeeccCCCceeecc-cCCCeeEEEeCCCCCeEEEEeCCC----cEEEeecCCCeEEecC
Q 014755 340 SWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV-QKDPIRAATWDPTCTRLVLCTGSS----HLYMWTPSGAYCVSNP 414 (419)
Q Consensus 340 ~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg----~i~vw~~~~~~~~~~~ 414 (419)
..+|+|++++.+... ..|.+.|++++.....-. ..+-|+.++|||+++++|.+--+| .|+++|+.+++...+.
T Consensus 408 ~vs~dGK~~vvaNdr--~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vT 485 (668)
T COG4946 408 KVSPDGKKVVVANDR--FELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVT 485 (668)
T ss_pred EEcCCCcEEEEEcCc--eEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEec
Confidence 999999999999987 999999999999876664 677899999999999999887665 6999999999998776
Q ss_pred CC
Q 014755 415 LP 416 (419)
Q Consensus 415 ~~ 416 (419)
.|
T Consensus 486 T~ 487 (668)
T COG4946 486 TP 487 (668)
T ss_pred CC
Confidence 65
No 230
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.78 E-value=4.9e-16 Score=139.75 Aligned_cols=226 Identities=15% Similarity=0.143 Sum_probs=160.5
Q ss_pred eEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccC--CeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEE
Q 014755 29 RLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKR--LMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHIL 106 (419)
Q Consensus 29 ~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~--g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 106 (419)
.|.++|..+.....+..+...+.+.+|+|||++|+++...+ ..|++||+.+++.. .+..+...+.+++|+|||+.|+
T Consensus 171 ~l~~~d~~g~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~-~~~~~~~~~~~~~~spDg~~l~ 249 (417)
T TIGR02800 171 ELQVADYDGANPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQRE-KVASFPGMNGAPAFSPDGSKLA 249 (417)
T ss_pred eEEEEcCCCCCCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEE-EeecCCCCccceEECCCCCEEE
Confidence 48889988777777777777899999999999999887542 47999999888654 3444555667899999999887
Q ss_pred EEecC--CCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeee
Q 014755 107 TTSDF--QLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIE 184 (419)
Q Consensus 107 ~~~~~--~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~ 184 (419)
..... ...|++||+.+++...+..+........|+||++.|++.+...+...|+++|+.+++.. .+..+......+.
T Consensus 250 ~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~-~l~~~~~~~~~~~ 328 (417)
T TIGR02800 250 VSLSKDGNPDIYVMDLDGKQLTRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVR-RLTFRGGYNASPS 328 (417)
T ss_pred EEECCCCCccEEEEECCCCCEEECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEE-EeecCCCCccCeE
Confidence 65432 22699999998877666555555567899999999988776544457899998876643 3444455677889
Q ss_pred ECCCCCeEEEEcCCC-CceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecC---cEEEEEcCCceeeeee
Q 014755 185 WSPDDSAIVIWDSPL-EYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQ---TLRVLNHLTWKTFAEF 260 (419)
Q Consensus 185 ~~~~~~~l~~~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~---~i~v~d~~~~~~~~~~ 260 (419)
|+|+|+++++..... ...|.+||+.+.....+.... ......|+|+|++|+..+.++ .+++.+.. ++....+
T Consensus 329 ~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~~l~~~~---~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~~-g~~~~~~ 404 (417)
T TIGR02800 329 WSPDGDLIAFVHREGGGFNIAVMDLDGGGERVLTDTG---LDESPSFAPNGRMILYATTRGGRGVLGLVSTD-GRFRARL 404 (417)
T ss_pred ECCCCCEEEEEEccCCceEEEEEeCCCCCeEEccCCC---CCCCceECCCCCEEEEEEeCCCcEEEEEEECC-CceeeEC
Confidence 999999988744321 237899998444444443322 345678999999998887654 35555533 4433333
No 231
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.78 E-value=1.7e-16 Score=146.31 Aligned_cols=221 Identities=10% Similarity=0.031 Sum_probs=151.8
Q ss_pred EecCCCcEEEEeecCcceeEEEEecCC-CeEEEEeccCCeEEEEEccCC-------cceeeeecCCccEeEEEECCCCCE
Q 014755 33 RDAHSFKVVQLFSCLDKISYIEWALDS-EYILCGLYKRLMIQAWSLTQP-------EWTCKIDEGLAGIAYARWSPDSRH 104 (419)
Q Consensus 33 ~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~~~g~i~iw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~ 104 (419)
|+.++--+.++..|...+..++.+++. .++++|+.| |+|++|+...- +...++......+.++...+.+..
T Consensus 1034 W~p~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~D-GtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~ 1112 (1431)
T KOG1240|consen 1034 WNPRGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDD-GTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQ 1112 (1431)
T ss_pred CCccceEeehhhhccccccceeecCCCCceEEEecCC-ceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCe
Confidence 666655555667799999999988755 888898865 99999998632 122233334567899999999999
Q ss_pred EEEEecCCCeEEEEEcCCC-------eEEE-eccCC--CCeeeEEEccC-CC-EEEEEeecCCCCeEEEEeccCCeEEEE
Q 014755 105 ILTTSDFQLRLTVWSLLNT-------ACVH-VQSPK--HASKGVAFTQD-GK-FAAICTRRDCKDYINLLSCHTWEIMGV 172 (419)
Q Consensus 105 l~~~~~~~~~i~iwd~~~~-------~~~~-~~~~~--~~~~~~~~~~~-~~-~l~~~~~~~~~g~v~i~d~~~~~~~~~ 172 (419)
+|+++.|| .|.+.++... ...+ ...+. .-+..-++... +. .++.+... +.|..||++.......
T Consensus 1113 ~Av~t~DG-~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~---~~iv~~D~r~~~~~w~ 1188 (1431)
T KOG1240|consen 1113 FAVSTKDG-SVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDL---SRIVSWDTRMRHDAWR 1188 (1431)
T ss_pred EEEEcCCC-eEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEec---cceEEecchhhhhHHh
Confidence 99998887 9999988751 1111 11111 12233344332 23 56666654 7899999987554433
Q ss_pred E--eccccceeeeeECCCCCeEEEEcCCCCceEEEEcCC-CceEEEEeecCCCCceeEEEEccCC---CeEEEEE--ecC
Q 014755 173 F--AVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPD-GRCLLKYQAYESGLGVKSISWSPCG---QFLAVGS--YDQ 244 (419)
Q Consensus 173 ~--~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~~~~--~d~ 244 (419)
+ ....+.|++++.+|.+.++++ +++.|.+.+||+. +.++.... +.+..++..+..+|-. ...++++ ..+
T Consensus 1189 lk~~~~hG~vTSi~idp~~~Wlvi--Gts~G~l~lWDLRF~~~i~sw~-~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~n 1265 (1431)
T KOG1240|consen 1189 LKNQLRHGLVTSIVIDPWCNWLVI--GTSRGQLVLWDLRFRVPILSWE-HPARAPIRHVWLCPTYPQESVSVSAGSSSNN 1265 (1431)
T ss_pred hhcCccccceeEEEecCCceEEEE--ecCCceEEEEEeecCceeeccc-CcccCCcceEEeeccCCCCceEEEecccCCC
Confidence 3 334578999999999999999 7889999999994 44444443 2333477888777643 3555544 467
Q ss_pred cEEEEEcCCceeeeeec
Q 014755 245 TLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 245 ~i~v~d~~~~~~~~~~~ 261 (419)
.|.+|++.+|.+...+.
T Consensus 1266 evs~wn~~~g~~~~vl~ 1282 (1431)
T KOG1240|consen 1266 EVSTWNMETGLRQTVLW 1282 (1431)
T ss_pred ceeeeecccCcceEEEE
Confidence 89999999997766665
No 232
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.78 E-value=1.1e-14 Score=117.79 Aligned_cols=289 Identities=12% Similarity=0.093 Sum_probs=194.6
Q ss_pred CCeEEEEecCC----CcEEEEeecCcceeEEEEecCCCeEEEEecc--CCeEEEEEccC--Cccee--eeecCCccEeEE
Q 014755 27 DYRLVVRDAHS----FKVVQLFSCLDKISYIEWALDSEYILCGLYK--RLMIQAWSLTQ--PEWTC--KIDEGLAGIAYA 96 (419)
Q Consensus 27 ~~~i~i~~~~~----~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~--~g~i~iw~~~~--~~~~~--~~~~~~~~v~~~ 96 (419)
...|.+|++.+ ....+...+.+..+-|+|+|+++.|.++..+ +|.|.-|.++. |++.. .......+.+.+
T Consensus 15 s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yv 94 (346)
T COG2706 15 SQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYV 94 (346)
T ss_pred CCceEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEE
Confidence 45599998873 2344455678889999999999999988766 67788877764 54321 112223344889
Q ss_pred EECCCCCEEEEEecCCCeEEEEEcCC-CeEEE---eccCCCC----------eeeEEEccCCCEEEEEeecCCCCeEEEE
Q 014755 97 RWSPDSRHILTTSDFQLRLTVWSLLN-TACVH---VQSPKHA----------SKGVAFTQDGKFAAICTRRDCKDYINLL 162 (419)
Q Consensus 97 ~~~~~~~~l~~~~~~~~~i~iwd~~~-~~~~~---~~~~~~~----------~~~~~~~~~~~~l~~~~~~~~~g~v~i~ 162 (419)
+++++|++++++....|.|.++-++. |.... ...|... +....+.|+++++++..-. ...|.+|
T Consensus 95 svd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG--~Dri~~y 172 (346)
T COG2706 95 SVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLG--TDRIFLY 172 (346)
T ss_pred EECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecC--CceEEEE
Confidence 99999999999998778999999965 43322 2333333 6788999999999987643 3589999
Q ss_pred eccCCeEEEEEe---ccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCC--ceEEEEeec-------CCCCceeEEEE
Q 014755 163 SCHTWEIMGVFA---VDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDG--RCLLKYQAY-------ESGLGVKSISW 230 (419)
Q Consensus 163 d~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~--~~~~~~~~~-------~~~~~v~~~~~ 230 (419)
++..+++...-. ......+.+.|+|++++..+. ..-+++|.+|..+. ..+..++.. ....+...+.+
T Consensus 173 ~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v-~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhi 251 (346)
T COG2706 173 DLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLV-NELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHI 251 (346)
T ss_pred EcccCccccccccccCCCCCcceEEEcCCCcEEEEE-eccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEE
Confidence 999776543221 234567899999999988775 35578999988833 333333322 12346788999
Q ss_pred ccCCCeEEEEEe-cCcEEEEEcCCce-eeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceE
Q 014755 231 SPCGQFLAVGSY-DQTLRVLNHLTWK-TFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIK 308 (419)
Q Consensus 231 s~~~~~l~~~~~-d~~i~v~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (419)
+|||++|.++.. ...|.+|.+.... .+......
T Consensus 252 s~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~--------------------------------------------- 286 (346)
T COG2706 252 SPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGIT--------------------------------------------- 286 (346)
T ss_pred CCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEe---------------------------------------------
Confidence 999999988753 2377777765321 12211100
Q ss_pred EEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeecc--CCCceeecc--cCCCeeEEEe
Q 014755 309 VRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDIC--RQEPAAILV--QKDPIRAATW 384 (419)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~--~~~~~~~~~--~~~~v~~~~~ 384 (419)
+.+...-....|+|.|++|+++.++ ...|.+|..+ +|++..+.. ......|+.|
T Consensus 287 ---------------------~teg~~PR~F~i~~~g~~Liaa~q~-sd~i~vf~~d~~TG~L~~~~~~~~~p~Pvcv~f 344 (346)
T COG2706 287 ---------------------PTEGQFPRDFNINPSGRFLIAANQK-SDNITVFERDKETGRLTLLGRYAVVPEPVCVKF 344 (346)
T ss_pred ---------------------ccCCcCCccceeCCCCCEEEEEccC-CCcEEEEEEcCCCceEEecccccCCCCcEEEEE
Confidence 0012223567899999999999886 3568888765 455554442 4555667776
Q ss_pred C
Q 014755 385 D 385 (419)
Q Consensus 385 s 385 (419)
.
T Consensus 345 ~ 345 (346)
T COG2706 345 L 345 (346)
T ss_pred c
Confidence 4
No 233
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.78 E-value=3.8e-16 Score=138.51 Aligned_cols=219 Identities=12% Similarity=0.060 Sum_probs=148.2
Q ss_pred eEEcCCCCEEE--EEe--C--CeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCC----eEEEEEccCC--
Q 014755 13 SCFSPNARYIA--VAV--D--YRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRL----MIQAWSLTQP-- 80 (419)
Q Consensus 13 ~~~s~d~~~la--~~~--~--~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g----~i~iw~~~~~-- 80 (419)
-+|||||+.++ +.+ + ..|++.++.+++..++....+.....+|||||+.|+..+...| .+.+|++..+
T Consensus 190 P~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~ 269 (428)
T PRK01029 190 PTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILALQGNQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAI 269 (428)
T ss_pred ceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeecCCCCccceEECCCCCEEEEEECCCCCcceeEEEeecccCCC
Confidence 57999998633 344 2 3588999999987777666666778999999999998764323 3344676653
Q ss_pred cceeeeecCC-ccEeEEEECCCCCEEEEEecCCCe--EEEEEcCC--CeEEEeccCCCCeeeEEEccCCCEEEEEeecCC
Q 014755 81 EWTCKIDEGL-AGIAYARWSPDSRHILTTSDFQLR--LTVWSLLN--TACVHVQSPKHASKGVAFTQDGKFAAICTRRDC 155 (419)
Q Consensus 81 ~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~~~~--i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 155 (419)
.....+.... ......+|+|||+.|+..+..++. |.++++.. ++...+......+....|+|||+.|++...+.+
T Consensus 270 g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g 349 (428)
T PRK01029 270 GKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKG 349 (428)
T ss_pred CcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCC
Confidence 2233444332 345678999999999988754334 44445542 334445555556688999999999998876544
Q ss_pred CCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEc-CCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCC
Q 014755 156 KDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWD-SPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCG 234 (419)
Q Consensus 156 ~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~ 234 (419)
...|++||+.+++.... ......+....|+|||+.|++.. ......|+++|+++.....+..... .+...+|+|-.
T Consensus 350 ~~~I~v~dl~~g~~~~L-t~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt~~~g--~~~~p~Ws~~~ 426 (428)
T PRK01029 350 VRQICVYDLATGRDYQL-TTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTRKIVIGSG--EKRFPSWGAFP 426 (428)
T ss_pred CcEEEEEECCCCCeEEc-cCCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCC--cccCceecCCC
Confidence 46899999998876443 33334567899999999887632 2234679999995544444443222 46778888754
No 234
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.77 E-value=5.7e-16 Score=139.33 Aligned_cols=241 Identities=13% Similarity=0.095 Sum_probs=162.9
Q ss_pred eEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCC--CeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEE
Q 014755 71 MIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQ--LRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAA 148 (419)
Q Consensus 71 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~--~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 148 (419)
.|.++|.+.++ .+.+..+...+....|+|||+.|+..+.++ ..|.+||+.+++...+...........|+|||+.|+
T Consensus 180 ~l~~~d~~g~~-~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~~g~~~~~~~SpDG~~la 258 (430)
T PRK00178 180 TLQRSDYDGAR-AVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITNFEGLNGAPAWSPDGSKLA 258 (430)
T ss_pred EEEEECCCCCC-ceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccCCCCCcCCeEECCCCCEEE
Confidence 47778877554 455666777889999999999998876432 369999999988777655555566899999999988
Q ss_pred EEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcC-CCCceEEEEcC-CCceEEEEeecCCCCcee
Q 014755 149 ICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDS-PLEYKVLIYSP-DGRCLLKYQAYESGLGVK 226 (419)
Q Consensus 149 ~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~ 226 (419)
+....++...|+++|+.+++.. .+..+........|+|||+.+++... .....|+++++ +++ ...+..... ...
T Consensus 259 ~~~~~~g~~~Iy~~d~~~~~~~-~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~-~~~lt~~~~--~~~ 334 (430)
T PRK00178 259 FVLSKDGNPEIYVMDLASRQLS-RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGR-AERVTFVGN--YNA 334 (430)
T ss_pred EEEccCCCceEEEEECCCCCeE-EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCC-EEEeecCCC--Ccc
Confidence 7654433347999999987654 34444455667899999998876432 22357888888 444 344432222 345
Q ss_pred EEEEccCCCeEEEEEec-C--cEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCcccccccccc
Q 014755 227 SISWSPCGQFLAVGSYD-Q--TLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDAT 303 (419)
Q Consensus 227 ~~~~s~~~~~l~~~~~d-~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (419)
...|+|+|++|+..+.+ + .|.++|+.+++. ..+...
T Consensus 335 ~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~-~~lt~~---------------------------------------- 373 (430)
T PRK00178 335 RPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSV-RILTDT---------------------------------------- 373 (430)
T ss_pred ceEECCCCCEEEEEEccCCceEEEEEECCCCCE-EEccCC----------------------------------------
Confidence 67899999999887653 2 478888877653 222100
Q ss_pred CCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCC-CCceEEEeeccCCCceeecccCCCeeEE
Q 014755 304 NGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDS-MPTTLWIWDICRQEPAAILVQKDPIRAA 382 (419)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d-~~~~i~iwd~~~~~~~~~~~~~~~v~~~ 382 (419)
.......|+|||+.++..+.+ ....|+++++..+....+..+.+.+...
T Consensus 374 ------------------------------~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~g~~~~~l~~~~g~~~~p 423 (430)
T PRK00178 374 ------------------------------SLDESPSVAPNGTMLIYATRQQGRGVLMLVSINGRVRLPLPTAQGEVREP 423 (430)
T ss_pred ------------------------------CCCCCceECCCCCEEEEEEecCCceEEEEEECCCCceEECcCCCCCcCCC
Confidence 001135799999998877653 1145777787654443333456678888
Q ss_pred EeCCC
Q 014755 383 TWDPT 387 (419)
Q Consensus 383 ~~s~~ 387 (419)
+|+|-
T Consensus 424 ~ws~~ 428 (430)
T PRK00178 424 SWSPY 428 (430)
T ss_pred ccCCC
Confidence 88873
No 235
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.77 E-value=6.6e-16 Score=138.91 Aligned_cols=181 Identities=19% Similarity=0.189 Sum_probs=130.4
Q ss_pred eEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCC--CeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEE
Q 014755 71 MIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQ--LRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAA 148 (419)
Q Consensus 71 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~--~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 148 (419)
.|.++|..... .+.+..+...+...+|+|||++|+.+...+ ..|++||+.+++...+........+++|+||++.|+
T Consensus 171 ~l~~~d~~g~~-~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~spDg~~l~ 249 (417)
T TIGR02800 171 ELQVADYDGAN-PQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVASFPGMNGAPAFSPDGSKLA 249 (417)
T ss_pred eEEEEcCCCCC-CEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEE
Confidence 68888876444 456666777789999999999999886432 379999999987766555556667899999999888
Q ss_pred EEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcC-CCCceEEEEcCCCceEEEEeecCCCCceeE
Q 014755 149 ICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDS-PLEYKVLIYSPDGRCLLKYQAYESGLGVKS 227 (419)
Q Consensus 149 ~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~ 227 (419)
+....++...|++||+.+++.. .+..+........|+|||+.|++... .....|+++|+.+.....+..... ....
T Consensus 250 ~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~l~~~~~--~~~~ 326 (417)
T TIGR02800 250 VSLSKDGNPDIYVMDLDGKQLT-RLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRRLTFRGG--YNAS 326 (417)
T ss_pred EEECCCCCccEEEEECCCCCEE-ECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCC--CccC
Confidence 7654333357999999876543 33334444557789999998876322 223478889985444445544333 5778
Q ss_pred EEEccCCCeEEEEEecC---cEEEEEcCCce
Q 014755 228 ISWSPCGQFLAVGSYDQ---TLRVLNHLTWK 255 (419)
Q Consensus 228 ~~~s~~~~~l~~~~~d~---~i~v~d~~~~~ 255 (419)
+.|+|+|++|+..+.++ .|.+||+.++.
T Consensus 327 ~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~ 357 (417)
T TIGR02800 327 PSWSPDGDLIAFVHREGGGFNIAVMDLDGGG 357 (417)
T ss_pred eEECCCCCEEEEEEccCCceEEEEEeCCCCC
Confidence 89999999999888765 78888887643
No 236
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.77 E-value=2.2e-18 Score=152.40 Aligned_cols=240 Identities=14% Similarity=0.172 Sum_probs=175.3
Q ss_pred hhhcccccC---eEEcCCCCEEEEEeCC-eEEEEecCCCcEEEE-eecCcceeEEEEecCCCeEEEEeccCCeEEEEEcc
Q 014755 4 TEAYKQTGP---SCFSPNARYIAVAVDY-RLVVRDAHSFKVVQL-FSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLT 78 (419)
Q Consensus 4 ~~~~~~~~~---~~~s~d~~~la~~~~~-~i~i~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~ 78 (419)
..+.+|.++ +.|...|.+|++|+|+ .++||..+++.++.. .+|.+.|+.++.+.+..++++++.| ..|++|.+.
T Consensus 184 krLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D-~vIrvWrl~ 262 (1113)
T KOG0644|consen 184 KRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASND-KVIRVWRLP 262 (1113)
T ss_pred HHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccC-ceEEEEecC
Confidence 355678766 5799999999999955 589999999988875 4699999999999999999999987 699999999
Q ss_pred CCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEe-----ccCCCCeeeEEEccCCCEEEEEeec
Q 014755 79 QPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHV-----QSPKHASKGVAFTQDGKFAAICTRR 153 (419)
Q Consensus 79 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~ 153 (419)
++.++..+.+|++.|++++|+|-- +.+.++ ++++||.+-.-.... ...+.-+.++.|..++..+++++.+
T Consensus 263 ~~~pvsvLrghtgavtaiafsP~~----sss~dg-t~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~Tgs~d 337 (1113)
T KOG0644|consen 263 DGAPVSVLRGHTGAVTAIAFSPRA----SSSDDG-TCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFLTGSRD 337 (1113)
T ss_pred CCchHHHHhccccceeeeccCccc----cCCCCC-ceEeccccccccccCCCCCCcccccceeeeeccccccccccccCC
Confidence 999999999999999999999954 555555 999999982111111 1122334667777777888888876
Q ss_pred CCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEcc
Q 014755 154 DCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSP 232 (419)
Q Consensus 154 ~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~ 232 (419)
+.-..|.... +..+...+.-+.++.+-..+.+. ...+..+.+|++ +|...+.+.+|.+ .+..+.++|
T Consensus 338 ---~ea~n~e~~~------l~~~~~~lif~t~ssd~~~~~~~-ar~~~~~~vwnl~~g~l~H~l~ghsd--~~yvLd~Hp 405 (1113)
T KOG0644|consen 338 ---GEARNHEFEQ------LAWRSNLLIFVTRSSDLSSIVVT-ARNDHRLCVWNLYTGQLLHNLMGHSD--EVYVLDVHP 405 (1113)
T ss_pred ---cccccchhhH------hhhhccceEEEecccccccccee-eeeeeEeeeeecccchhhhhhccccc--ceeeeeecC
Confidence 4555554432 11111112222222222222221 344677889999 9999999988888 788999999
Q ss_pred CCC-eEEEEEecCcEEEEEcCCceeeeeec
Q 014755 233 CGQ-FLAVGSYDQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 233 ~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~ 261 (419)
-+. ...+++.||...|||+-.|.+++.+.
T Consensus 406 fn~ri~msag~dgst~iwdi~eg~pik~y~ 435 (1113)
T KOG0644|consen 406 FNPRIAMSAGYDGSTIIWDIWEGIPIKHYF 435 (1113)
T ss_pred CCcHhhhhccCCCceEeeecccCCcceeee
Confidence 654 55688999999999999888877654
No 237
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=99.77 E-value=7.3e-18 Score=140.26 Aligned_cols=283 Identities=13% Similarity=0.167 Sum_probs=209.3
Q ss_pred hcccccC---eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEe--ecCcceeEEEEec--CCCeEEEEeccCCeEEEEEc
Q 014755 6 AYKQTGP---SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLF--SCLDKISYIEWAL--DSEYILCGLYKRLMIQAWSL 77 (419)
Q Consensus 6 ~~~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~--~~~~~v~~~~~s~--~~~~l~~~~~~~g~i~iw~~ 77 (419)
+.+|.++ |.|...|..|++++ +..|.+||...++....+ +|...|..-.|-| +.+.+++.+.| |.+++=.+
T Consensus 138 L~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~d-gqvr~s~i 216 (559)
T KOG1334|consen 138 LNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRD-GQVRVSEI 216 (559)
T ss_pred ccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceecccc-Cceeeeee
Confidence 3455555 88999999999999 567999999998877655 3888888888988 34567777766 89998776
Q ss_pred cCCcc---eeeeecCCccEeEEEECCCCCE-EEEEecCCCeEEEEEcCCCeEEE----eccCCC---CeeeEEEccCCC-
Q 014755 78 TQPEW---TCKIDEGLAGIAYARWSPDSRH-ILTTSDFQLRLTVWSLLNTACVH----VQSPKH---ASKGVAFTQDGK- 145 (419)
Q Consensus 78 ~~~~~---~~~~~~~~~~v~~~~~~~~~~~-l~~~~~~~~~i~iwd~~~~~~~~----~~~~~~---~~~~~~~~~~~~- 145 (419)
..... ...+..|.++|..++.-|+..+ +.+++.|+ .+.-+|++.+.+.. ...... ....++..|...
T Consensus 217 ~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~-~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~ 295 (559)
T KOG1334|consen 217 LETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDA-VVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTN 295 (559)
T ss_pred ccccceecceecccccCccceeeecCCCCCccccccccc-ceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCcc
Confidence 53322 3456789999999999997655 67777877 89999998755433 112222 337889999775
Q ss_pred EEEEEeecCCCCeEEEEeccCCeE------EEEEec------cccceeeeeECCCCCeEEEEcCCCCceEEEEcC---CC
Q 014755 146 FAAICTRRDCKDYINLLSCHTWEI------MGVFAV------DTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP---DG 210 (419)
Q Consensus 146 ~l~~~~~~~~~g~v~i~d~~~~~~------~~~~~~------~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~---~~ 210 (419)
++++++.+ ..+++||.+.-.. +..+.. ..-.|++++|+.++..+++ .-.|-.|+++.. .|
T Consensus 296 ~faVgG~d---qf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLa--SYnDe~IYLF~~~~~~G 370 (559)
T KOG1334|consen 296 EFAVGGSD---QFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLA--SYNDEDIYLFNKSMGDG 370 (559)
T ss_pred ccccCChh---hhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceee--eecccceEEeccccccC
Confidence 78888876 6899999876322 122222 2346899999977666655 455788999976 34
Q ss_pred ----------ceEEE-EeecCCCCceeEEEE-ccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccC
Q 014755 211 ----------RCLLK-YQAYESGLGVKSISW-SPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEV 278 (419)
Q Consensus 211 ----------~~~~~-~~~~~~~~~v~~~~~-s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (419)
..++. +.+|.+...|.++-| -|...|+++|+.-|.|.+|+-.+++.++.++.
T Consensus 371 ~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~Meg---------------- 434 (559)
T KOG1334|consen 371 SEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEG---------------- 434 (559)
T ss_pred CCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhc----------------
Confidence 23333 667776667888876 57889999999999999999999888777651
Q ss_pred CCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCce
Q 014755 279 DEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTT 358 (419)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~ 358 (419)
...-|+|+.-+|--..||+.+-| ..
T Consensus 435 -----------------------------------------------------Dr~VVNCLEpHP~~PvLAsSGid--~D 459 (559)
T KOG1334|consen 435 -----------------------------------------------------DRHVVNCLEPHPHLPVLASSGID--HD 459 (559)
T ss_pred -----------------------------------------------------ccceEeccCCCCCCchhhccCCc--cc
Confidence 12258899999999999999988 99
Q ss_pred EEEeeccC
Q 014755 359 LWIWDICR 366 (419)
Q Consensus 359 i~iwd~~~ 366 (419)
|+||...+
T Consensus 460 VKIWTP~~ 467 (559)
T KOG1334|consen 460 VKIWTPLT 467 (559)
T ss_pred eeeecCCc
Confidence 99998744
No 238
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=99.77 E-value=1.9e-17 Score=137.81 Aligned_cols=303 Identities=15% Similarity=0.186 Sum_probs=213.9
Q ss_pred eecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeee-ecCCccEeEEEECC--CCCEEEEEecCCCeEEEEEc
Q 014755 44 FSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKI-DEGLAGIAYARWSP--DSRHILTTSDFQLRLTVWSL 120 (419)
Q Consensus 44 ~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~-~~~~~~v~~~~~~~--~~~~l~~~~~~~~~i~iwd~ 120 (419)
-.|.+.|..+.|...|..|++++.| -.|.+||...++....+ .+|...|....|-| +.+.+++++.++ ++++=.+
T Consensus 139 ~~H~GcVntV~FN~~Gd~l~SgSDD-~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dg-qvr~s~i 216 (559)
T KOG1334|consen 139 NKHKGCVNTVHFNQRGDVLASGSDD-LQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDG-QVRVSEI 216 (559)
T ss_pred cCCCCccceeeecccCceeeccCcc-ceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccC-ceeeeee
Confidence 3589999999999999999999966 69999999988765554 46788888888888 456788888888 9988776
Q ss_pred CC-CeEE---EeccCCCCeeeEEEccCC-CEEEEEeecCCCCeEEEEeccCCeEEEEEec---ccc---ceeeeeECCCC
Q 014755 121 LN-TACV---HVQSPKHASKGVAFTQDG-KFAAICTRRDCKDYINLLSCHTWEIMGVFAV---DTL---DLADIEWSPDD 189 (419)
Q Consensus 121 ~~-~~~~---~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~---~~~---~v~~~~~~~~~ 189 (419)
.. +... ++..|.+++..++.-|+. .-|.+++.| +.+.-+|++...+...+.. +.. ....++..|..
T Consensus 217 ~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD---~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~n 293 (559)
T KOG1334|consen 217 LETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGED---AVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRN 293 (559)
T ss_pred ccccceecceecccccCccceeeecCCCCCcccccccc---cceeeeeeccCCccceeeeeccCCccceeeeeEecCCCC
Confidence 54 3332 377888999999999987 456667666 7899999988655433322 222 46788888877
Q ss_pred C-eEEEEcCCCCceEEEEcC---CCc----eEEEEeec----CCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceee
Q 014755 190 S-AIVIWDSPLEYKVLIYSP---DGR----CLLKYQAY----ESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTF 257 (419)
Q Consensus 190 ~-~l~~~~~~~~~~i~~~d~---~~~----~~~~~~~~----~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~ 257 (419)
. .+++ +..+.-+++||. ..+ .+..+..+ .....|++++|+.++.-|.+.-.|-.|++|.-.-+.-
T Consensus 294 t~~faV--gG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G- 370 (559)
T KOG1334|consen 294 TNEFAV--GGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDG- 370 (559)
T ss_pred cccccc--CChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccC-
Confidence 6 4555 667888899986 111 12222211 2223699999998877666667777899985321110
Q ss_pred eeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCC--cc
Q 014755 258 AEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPK--QG 335 (419)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 335 (419)
... .+. ++ ........+.+|. ..
T Consensus 371 ~~p---~~~---------s~-------------------------------------------~~~~~k~vYKGHrN~~T 395 (559)
T KOG1334|consen 371 SEP---DPS---------SP-------------------------------------------REQYVKRVYKGHRNSRT 395 (559)
T ss_pred CCC---CCC---------cc-------------------------------------------hhhccchhhcccccccc
Confidence 000 000 00 0000000022343 23
Q ss_pred eEEEEE-ccCCeEEEEecCCCCceEEEeeccCCCceeecc-cCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEE
Q 014755 336 IGLMSW-SSDSQYICTRNDSMPTTLWIWDICRQEPAAILV-QKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCV 411 (419)
Q Consensus 336 v~~~~~-s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~ 411 (419)
|..+-| -|...|+++|++- |.|.||+-.+++++..+. ...-|+|+.-+|--..||+++-|.-|+||...+.+..
T Consensus 396 VKgVNFfGPrsEyVvSGSDC--GhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP~~~er~ 471 (559)
T KOG1334|consen 396 VKGVNFFGPRSEYVVSGSDC--GHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIWTPLTAERA 471 (559)
T ss_pred cceeeeccCccceEEecCcc--ceEEEEecchhHHHHHhhcccceEeccCCCCCCchhhccCCccceeeecCCccccc
Confidence 666655 7899999999999 999999999999998884 4448999999999999999999999999999655443
No 239
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.77 E-value=1.9e-18 Score=142.83 Aligned_cols=233 Identities=12% Similarity=0.203 Sum_probs=189.9
Q ss_pred CccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeE
Q 014755 90 LAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEI 169 (419)
Q Consensus 90 ~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~ 169 (419)
......+.++.+|++++.++..+ .|..+|..++....-......|..+.|-.+.+++|++-. ..+++||-. |..
T Consensus 129 eFGPY~~~ytrnGrhlllgGrKG-HlAa~Dw~t~~L~~Ei~v~Etv~Dv~~LHneq~~AVAQK----~y~yvYD~~-GtE 202 (545)
T KOG1272|consen 129 EFGPYHLDYTRNGRHLLLGGRKG-HLAAFDWVTKKLHFEINVMETVRDVTFLHNEQFFAVAQK----KYVYVYDNN-GTE 202 (545)
T ss_pred ccCCeeeeecCCccEEEecCCcc-ceeeeecccceeeeeeehhhhhhhhhhhcchHHHHhhhh----ceEEEecCC-CcE
Confidence 34567899999999999999877 999999999988875556677899999999999999875 589999954 777
Q ss_pred EEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEE
Q 014755 170 MGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRV 248 (419)
Q Consensus 170 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v 248 (419)
+..++.+ ..+..+.|-|.--+|+. ++..|.+..-|+ .|+.+..+..... .+..+.-+|-+-.+-+|...|+|.+
T Consensus 203 lHClk~~-~~v~rLeFLPyHfLL~~--~~~~G~L~Y~DVS~GklVa~~~t~~G--~~~vm~qNP~NaVih~GhsnGtVSl 277 (545)
T KOG1272|consen 203 LHCLKRH-IRVARLEFLPYHFLLVA--ASEAGFLKYQDVSTGKLVASIRTGAG--RTDVMKQNPYNAVIHLGHSNGTVSL 277 (545)
T ss_pred Eeehhhc-Cchhhhcccchhheeee--cccCCceEEEeechhhhhHHHHccCC--ccchhhcCCccceEEEcCCCceEEe
Confidence 7777765 67889999998877776 677899999999 8988888776555 6888899998889999999999999
Q ss_pred EEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCC
Q 014755 249 LNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTD 328 (419)
Q Consensus 249 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (419)
|...+.+++..+-
T Consensus 278 WSP~skePLvKiL------------------------------------------------------------------- 290 (545)
T KOG1272|consen 278 WSPNSKEPLVKIL------------------------------------------------------------------- 290 (545)
T ss_pred cCCCCcchHHHHH-------------------------------------------------------------------
Confidence 9988777655542
Q ss_pred CCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 329 KPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 329 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
.|.++|.++++.++|+|+|+.+.| ..++|||++.-..+..+...-+...+++|..| ++.++....|.||.=.
T Consensus 291 --cH~g~V~siAv~~~G~YMaTtG~D--r~~kIWDlR~~~ql~t~~tp~~a~~ls~Sqkg--lLA~~~G~~v~iw~d~ 362 (545)
T KOG1272|consen 291 --CHRGPVSSIAVDRGGRYMATTGLD--RKVKIWDLRNFYQLHTYRTPHPASNLSLSQKG--LLALSYGDHVQIWKDA 362 (545)
T ss_pred --hcCCCcceEEECCCCcEEeecccc--cceeEeeeccccccceeecCCCcccccccccc--ceeeecCCeeeeehhh
Confidence 488889999999999999999999 99999999986644444335677889999777 3334555679999643
No 240
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.76 E-value=1.1e-14 Score=115.14 Aligned_cols=234 Identities=15% Similarity=0.186 Sum_probs=165.1
Q ss_pred CeEEcCCCCEEEEEeCCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEe-cc-----CCeEEEEEccCCccee
Q 014755 12 PSCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGL-YK-----RLMIQAWSLTQPEWTC 84 (419)
Q Consensus 12 ~~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~-~~-----~g~i~iw~~~~~~~~~ 84 (419)
.++|+.|..-+++|.+...+||+.+..+...... +.+.+.-+..---.++||..+ .. .+.|.|||=...+++.
T Consensus 10 svs~NQD~ScFava~~~Gfriyn~~P~ke~~~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWDD~k~~~i~ 89 (346)
T KOG2111|consen 10 SVSFNQDHSCFAVATDTGFRIYNCDPFKESASRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWDDLKERCII 89 (346)
T ss_pred EEEEccCCceEEEEecCceEEEecCchhhhhhhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEecccCcEEE
Confidence 3899999999999999999999987644322111 222222222222344555433 22 1479999955555555
Q ss_pred eeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC-CeEEE-ec--cCCCCeeeEEEccCCCEEEEEeecCCCCeEE
Q 014755 85 KIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN-TACVH-VQ--SPKHASKGVAFTQDGKFAAICTRRDCKDYIN 160 (419)
Q Consensus 85 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~-~~~~~-~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~ 160 (419)
++ ....+|.++.+.++ .|++.-. + .|++|...+ .+.++ +. ..+.+..+++-..+...||.-+.. .|.|+
T Consensus 90 el-~f~~~I~~V~l~r~--riVvvl~-~-~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k--~GqvQ 162 (346)
T KOG2111|consen 90 EL-SFNSEIKAVKLRRD--RIVVVLE-N-KIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFK--TGQVQ 162 (346)
T ss_pred EE-EeccceeeEEEcCC--eEEEEec-C-eEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCc--cceEE
Confidence 55 45678999999875 5666554 3 799999884 33333 22 223333333333334556655543 48999
Q ss_pred EEeccCCeE--EEEEeccccceeeeeECCCCCeEEEEcCCCCce-EEEEcC-CCceEEEEeecCCCCceeEEEEccCCCe
Q 014755 161 LLSCHTWEI--MGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYK-VLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQF 236 (419)
Q Consensus 161 i~d~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~-i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 236 (419)
|.|+..-+. ...+..|...|.|++.+.+|..+++ ++..|+ |++||. +|+.+..+........+.+++|||+..+
T Consensus 163 i~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vAT--aStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~ 240 (346)
T KOG2111|consen 163 IVDLASTKPNAPSIINAHDSDIACVALNLQGTLVAT--ASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSW 240 (346)
T ss_pred EEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEE--eccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccE
Confidence 999987555 4778899999999999999999998 555554 899999 9999999887766678999999999999
Q ss_pred EEEEEecCcEEEEEcCCc
Q 014755 237 LAVGSYDQTLRVLNHLTW 254 (419)
Q Consensus 237 l~~~~~d~~i~v~d~~~~ 254 (419)
|+++|..|++.||.++..
T Consensus 241 LavsSdKgTlHiF~l~~~ 258 (346)
T KOG2111|consen 241 LAVSSDKGTLHIFSLRDT 258 (346)
T ss_pred EEEEcCCCeEEEEEeecC
Confidence 999999999999998753
No 241
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.76 E-value=9.3e-14 Score=117.17 Aligned_cols=272 Identities=13% Similarity=0.076 Sum_probs=174.7
Q ss_pred CCCEEEEEe-C-----CeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEec---------cCCeEEEEEccCCcc
Q 014755 18 NARYIAVAV-D-----YRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLY---------KRLMIQAWSLTQPEW 82 (419)
Q Consensus 18 d~~~la~~~-~-----~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---------~~g~i~iw~~~~~~~ 82 (419)
+++++.+.. . ++|.+.|..+++.+..+.-...-..+ +||||+.|+++.. ++..|.+||..+.+.
T Consensus 11 ~~~~v~V~d~~~~~~~~~v~ViD~~~~~v~g~i~~G~~P~~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~ 89 (352)
T TIGR02658 11 DARRVYVLDPGHFAATTQVYTIDGEAGRVLGMTDGGFLPNPV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLP 89 (352)
T ss_pred CCCEEEEECCcccccCceEEEEECCCCEEEEEEEccCCCcee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcE
Confidence 455555543 2 68999999999998877643333445 9999999998887 667999999999998
Q ss_pred eeeeecCCc-------cEeEEEECCCCCEEEEEecC-CCeEEEEEcCCCeEEE-eccCCCCeeeEEE--------ccCCC
Q 014755 83 TCKIDEGLA-------GIAYARWSPDSRHILTTSDF-QLRLTVWSLLNTACVH-VQSPKHASKGVAF--------TQDGK 145 (419)
Q Consensus 83 ~~~~~~~~~-------~v~~~~~~~~~~~l~~~~~~-~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~--------~~~~~ 145 (419)
+..+..... ....++++|||+++++...+ ...|.+.|+.+++.+. +.. +....-... +.||.
T Consensus 90 ~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~v-p~~~~vy~t~e~~~~~~~~Dg~ 168 (352)
T TIGR02658 90 IADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDV-PDCYHIFPTANDTFFMHCRDGS 168 (352)
T ss_pred EeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeC-CCCcEEEEecCCccEEEeecCc
Confidence 888764322 23478999999999988744 4599999999998887 333 222222222 33333
Q ss_pred EEEEEeecCCCCeEEEEeccCCeEEEEEeccccce-eeeeECC-CCCeEEEEcCCCCceEEEEcCCCc------eEEEEe
Q 014755 146 FAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDL-ADIEWSP-DDSAIVIWDSPLEYKVLIYSPDGR------CLLKYQ 217 (419)
Q Consensus 146 ~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v-~~~~~~~-~~~~l~~~~~~~~~~i~~~d~~~~------~~~~~~ 217 (419)
.+.....++ |+... . ....+.....++ ....|.+ +|+++++ .. .|.|++.|+.+. ....+.
T Consensus 169 ~~~v~~d~~--g~~~~---~---~~~vf~~~~~~v~~rP~~~~~dg~~~~v--s~-eG~V~~id~~~~~~~~~~~~~~~~ 237 (352)
T TIGR02658 169 LAKVGYGTK--GNPKI---K---PTEVFHPEDEYLINHPAYSNKSGRLVWP--TY-TGKIFQIDLSSGDAKFLPAIEAFT 237 (352)
T ss_pred eEEEEecCC--CceEE---e---eeeeecCCccccccCCceEcCCCcEEEE--ec-CCeEEEEecCCCcceecceeeecc
Confidence 333332221 22110 0 000111100010 1113455 8888877 23 499999996332 122221
Q ss_pred ecC-----CCCceeEEEEccCCCeEEEEEe----------cCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcc
Q 014755 218 AYE-----SGLGVKSISWSPCGQFLAVGSY----------DQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPL 282 (419)
Q Consensus 218 ~~~-----~~~~v~~~~~s~~~~~l~~~~~----------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (419)
... .......++++|+++.+++... .+.|.++|..+++.+..+.-
T Consensus 238 ~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~v-------------------- 297 (352)
T TIGR02658 238 EAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIEL-------------------- 297 (352)
T ss_pred ccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeC--------------------
Confidence 110 1123445999999998887431 24799999999998887641
Q ss_pred cccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCe-EEEEecCCCCceEEE
Q 014755 283 QLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQ-YICTRNDSMPTTLWI 361 (419)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~d~~~~i~i 361 (419)
...+..+++|||++ +|++.... ++.|.+
T Consensus 298 --------------------------------------------------G~~~~~iavS~Dgkp~lyvtn~~-s~~VsV 326 (352)
T TIGR02658 298 --------------------------------------------------GHEIDSINVSQDAKPLLYALSTG-DKTLYI 326 (352)
T ss_pred --------------------------------------------------CCceeeEEECCCCCeEEEEeCCC-CCcEEE
Confidence 12367899999999 77766642 388999
Q ss_pred eeccCCCceeec
Q 014755 362 WDICRQEPAAIL 373 (419)
Q Consensus 362 wd~~~~~~~~~~ 373 (419)
+|..+++.+..+
T Consensus 327 iD~~t~k~i~~i 338 (352)
T TIGR02658 327 FDAETGKELSSV 338 (352)
T ss_pred EECcCCeEEeee
Confidence 999999888776
No 242
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.75 E-value=6.3e-14 Score=121.58 Aligned_cols=244 Identities=16% Similarity=0.171 Sum_probs=165.9
Q ss_pred CeEEcCCCCEEEEEeC-----CeEEEEecCC--CcEEE--Eee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccC-C
Q 014755 12 PSCFSPNARYIAVAVD-----YRLVVRDAHS--FKVVQ--LFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQ-P 80 (419)
Q Consensus 12 ~~~~s~d~~~la~~~~-----~~i~i~~~~~--~~~~~--~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~-~ 80 (419)
.++++|++++|.++.. +.|..|++.. +++.. ... .......++++|++++|+++....|.|.++++.. +
T Consensus 41 ~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g 120 (345)
T PF10282_consen 41 WLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDG 120 (345)
T ss_dssp CEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS
T ss_pred eEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCc
Confidence 3899999999999964 4688887765 34333 222 3455678999999999999998779999999987 3
Q ss_pred cceee--ee-----------cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCe--EEE---e-ccCCCCeeeEEEc
Q 014755 81 EWTCK--ID-----------EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTA--CVH---V-QSPKHASKGVAFT 141 (419)
Q Consensus 81 ~~~~~--~~-----------~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~--~~~---~-~~~~~~~~~~~~~ 141 (419)
..... +. .......++.|+|+++++++.......|.+|++.... ... + .......+.+.|+
T Consensus 121 ~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~ 200 (345)
T PF10282_consen 121 SLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFS 200 (345)
T ss_dssp EEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-
T ss_pred ccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEc
Confidence 32222 11 1123478999999999999986544489999998754 322 2 3445566999999
Q ss_pred cCCCEEEEEeecCCCCeEEEEecc--CCeE--EEEEecc------ccceeeeeECCCCCeEEEEcCCCCceEEEEcC---
Q 014755 142 QDGKFAAICTRRDCKDYINLLSCH--TWEI--MGVFAVD------TLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP--- 208 (419)
Q Consensus 142 ~~~~~l~~~~~~~~~g~v~i~d~~--~~~~--~~~~~~~------~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~--- 208 (419)
|+++++++..+. .+.|.++++. ++.. +..+... ......+.++|||++|++.+.. .+.|.+|++
T Consensus 201 pdg~~~Yv~~e~--s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~-~~sI~vf~~d~~ 277 (345)
T PF10282_consen 201 PDGKYAYVVNEL--SNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRG-SNSISVFDLDPA 277 (345)
T ss_dssp TTSSEEEEEETT--TTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECT-TTEEEEEEECTT
T ss_pred CCcCEEEEecCC--CCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEecc-CCEEEEEEEecC
Confidence 999999888765 4789999988 4432 2222221 1257789999999999986644 788999998
Q ss_pred CCceEEEEeecCCCCceeEEEEccCCCeEEEEEe-cCcEEEEEc--CCceeee
Q 014755 209 DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSY-DQTLRVLNH--LTWKTFA 258 (419)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d~~i~v~d~--~~~~~~~ 258 (419)
+|+....-.........+.++++|+|++|+++.. ++.|.+|++ ++|....
T Consensus 278 ~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~~ 330 (345)
T PF10282_consen 278 TGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKLTP 330 (345)
T ss_dssp TTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEE
T ss_pred CCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcEEE
Confidence 2333222111112225899999999999998874 568999876 4555433
No 243
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.75 E-value=1.1e-17 Score=138.47 Aligned_cols=200 Identities=11% Similarity=0.161 Sum_probs=167.7
Q ss_pred ceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEe
Q 014755 49 KISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHV 128 (419)
Q Consensus 49 ~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~ 128 (419)
.-..+.++.+|++|+.++.. |.|..+|..++++...+. -...|.++.|..+.++++++-. . .+++||-..-+.-.+
T Consensus 131 GPY~~~ytrnGrhlllgGrK-GHlAa~Dw~t~~L~~Ei~-v~Etv~Dv~~LHneq~~AVAQK-~-y~yvYD~~GtElHCl 206 (545)
T KOG1272|consen 131 GPYHLDYTRNGRHLLLGGRK-GHLAAFDWVTKKLHFEIN-VMETVRDVTFLHNEQFFAVAQK-K-YVYVYDNNGTELHCL 206 (545)
T ss_pred CCeeeeecCCccEEEecCCc-cceeeeecccceeeeeee-hhhhhhhhhhhcchHHHHhhhh-c-eEEEecCCCcEEeeh
Confidence 45788999999999999976 999999999998877763 4457899999999998888765 3 799999766554444
Q ss_pred ccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC
Q 014755 129 QSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP 208 (419)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~ 208 (419)
. ....+..+.|-|.--+|++++.. |.++.-|+.+|+.+..+....+.+..+.-+|-+..+-+ +..+|+|.+|++
T Consensus 207 k-~~~~v~rLeFLPyHfLL~~~~~~---G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~--GhsnGtVSlWSP 280 (545)
T KOG1272|consen 207 K-RHIRVARLEFLPYHFLLVAASEA---GFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHL--GHSNGTVSLWSP 280 (545)
T ss_pred h-hcCchhhhcccchhheeeecccC---CceEEEeechhhhhHHHHccCCccchhhcCCccceEEE--cCCCceEEecCC
Confidence 3 34568899999988777777765 89999999999999999988899999999999988888 788999999999
Q ss_pred -CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeee
Q 014755 209 -DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEF 260 (419)
Q Consensus 209 -~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 260 (419)
..+++..+-.|.. +|.++++.++|+|+++.+.|..++|||++....+.++
T Consensus 281 ~skePLvKiLcH~g--~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~ 331 (545)
T KOG1272|consen 281 NSKEPLVKILCHRG--PVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTY 331 (545)
T ss_pred CCcchHHHHHhcCC--CcceEEECCCCcEEeecccccceeEeeecccccccee
Confidence 5666666666665 8999999999999999999999999999876655444
No 244
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.75 E-value=9.5e-14 Score=117.14 Aligned_cols=278 Identities=10% Similarity=-0.005 Sum_probs=175.5
Q ss_pred CeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEec---------CCCeEEEEEcCCCeEEE-eccCCC------
Q 014755 70 LMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSD---------FQLRLTVWSLLNTACVH-VQSPKH------ 133 (419)
Q Consensus 70 g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------~~~~i~iwd~~~~~~~~-~~~~~~------ 133 (419)
++|.+.|..+++.+..+.....+- .+ ++||++.++++.. +...|.+||..+.+.+. +.....
T Consensus 27 ~~v~ViD~~~~~v~g~i~~G~~P~-~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~ 104 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMTDGGFLPN-PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVG 104 (352)
T ss_pred ceEEEEECCCCEEEEEEEccCCCc-ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhcc
Confidence 689999999999888887655443 34 9999999999876 55599999999998887 433222
Q ss_pred -CeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC--CC
Q 014755 134 -ASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP--DG 210 (419)
Q Consensus 134 -~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~--~~ 210 (419)
....++++|||+++++...+. ...|.+.|+.+++.+.++.... ...-...+++...+.+ .|+......+ +|
T Consensus 105 ~~~~~~~ls~dgk~l~V~n~~p-~~~V~VvD~~~~kvv~ei~vp~-~~~vy~t~e~~~~~~~----~Dg~~~~v~~d~~g 178 (352)
T TIGR02658 105 TYPWMTSLTPDNKTLLFYQFSP-SPAVGVVDLEGKAFVRMMDVPD-CYHIFPTANDTFFMHC----RDGSLAKVGYGTKG 178 (352)
T ss_pred CccceEEECCCCCEEEEecCCC-CCEEEEEECCCCcEEEEEeCCC-CcEEEEecCCccEEEe----ecCceEEEEecCCC
Confidence 225899999999999877542 3699999999999998877633 2222222222222222 1333333222 33
Q ss_pred ceEEEE-ee-cCCCCce-eEEEEcc-CCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccc
Q 014755 211 RCLLKY-QA-YESGLGV-KSISWSP-CGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDM 286 (419)
Q Consensus 211 ~~~~~~-~~-~~~~~~v-~~~~~s~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (419)
+....- .. +....++ ....|.+ +|+++....+ |+|.+.|+...+...... ... +.+... +++
T Consensus 179 ~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~-~~~-------~~~~~~--~~~--- 244 (352)
T TIGR02658 179 NPKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPA-IEA-------FTEAEK--ADG--- 244 (352)
T ss_pred ceEEeeeeeecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCCCcceecce-eee-------cccccc--ccc---
Confidence 321111 10 0100000 1114456 7777766665 999999965433211100 000 000000 000
Q ss_pred eeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecC--------CCCce
Q 014755 287 SELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRND--------SMPTT 358 (419)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--------d~~~~ 358 (419)
-..+...-++++|+++.++.... +..+.
T Consensus 245 --------------------------------------------wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~ 280 (352)
T TIGR02658 245 --------------------------------------------WRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRF 280 (352)
T ss_pred --------------------------------------------cCCCcceeEEEcCCCCEEEEEecCCccccccCCCCE
Confidence 02233445999999998887431 11257
Q ss_pred EEEeeccCCCceeecccCCCeeEEEeCCCCC-eEEEEe-CCCcEEEeecCCCeEEec
Q 014755 359 LWIWDICRQEPAAILVQKDPIRAATWDPTCT-RLVLCT-GSSHLYMWTPSGAYCVSN 413 (419)
Q Consensus 359 i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~-~dg~i~vw~~~~~~~~~~ 413 (419)
|.++|..+++.+..+.-...+..++++||++ +|++.. .++.|.+.|..+++.++.
T Consensus 281 V~ViD~~t~kvi~~i~vG~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~ 337 (352)
T TIGR02658 281 LFVVDAKTGKRLRKIELGHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSS 337 (352)
T ss_pred EEEEECCCCeEEEEEeCCCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEee
Confidence 9999999999998887777999999999999 777665 578899999998876643
No 245
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.75 E-value=2.7e-14 Score=119.18 Aligned_cols=219 Identities=14% Similarity=0.129 Sum_probs=168.1
Q ss_pred EcCCCCEEEEEeCCeEEEEecCCCcEEEEe-e-----c------CcceeEEE-Eec-CCCeEEEEeccCCeEEEEEccCC
Q 014755 15 FSPNARYIAVAVDYRLVVRDAHSFKVVQLF-S-----C------LDKISYIE-WAL-DSEYILCGLYKRLMIQAWSLTQP 80 (419)
Q Consensus 15 ~s~d~~~la~~~~~~i~i~~~~~~~~~~~~-~-----~------~~~v~~~~-~s~-~~~~l~~~~~~~g~i~iw~~~~~ 80 (419)
.+.||+.|+....|.|++||.++..+.++- + . ..+..-+. |++ +|.+++..+. |...|.+...+
T Consensus 274 ~nsDGkrIvFq~~GdIylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSR--GkaFi~~~~~~ 351 (668)
T COG4946 274 ANSDGKRIVFQNAGDIYLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSR--GKAFIMRPWDG 351 (668)
T ss_pred cCCCCcEEEEecCCcEEEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEec--CcEEEECCCCC
Confidence 577999999999999999999887665531 1 0 11122222 444 7899999884 88999887766
Q ss_pred cceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEE
Q 014755 81 EWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYIN 160 (419)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~ 160 (419)
-.+ ++ ++...|.-..+..+++.++.+..|+..+-++|.++++..++...-+.+.++..+|+|++++++... ..+.
T Consensus 352 ~~i-qv-~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~e~~lg~I~av~vs~dGK~~vvaNdr---~el~ 426 (668)
T COG4946 352 YSI-QV-GKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRIEKDLGNIEAVKVSPDGKKVVVANDR---FELW 426 (668)
T ss_pred eeE-Ec-CCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEEeeCCccceEEEEEcCCCcEEEEEcCc---eEEE
Confidence 543 33 567778888888888888988888779999999999988888888899999999999999988764 7899
Q ss_pred EEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcC--CCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEE
Q 014755 161 LLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDS--PLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLA 238 (419)
Q Consensus 161 i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 238 (419)
++|+++++....-+...+-|....|+|++++++..-. --...|+++|+.+..+...+.... .-.+.+|.|++++|.
T Consensus 427 vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~ta--~DfsPaFD~d~ryLY 504 (668)
T COG4946 427 VIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTPTA--YDFSPAFDPDGRYLY 504 (668)
T ss_pred EEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecCCcc--cccCcccCCCCcEEE
Confidence 9999999877666666788999999999999987322 123679999996644444443332 456789999999988
Q ss_pred EEEe
Q 014755 239 VGSY 242 (419)
Q Consensus 239 ~~~~ 242 (419)
.-+.
T Consensus 505 fLs~ 508 (668)
T COG4946 505 FLSA 508 (668)
T ss_pred EEec
Confidence 7654
No 246
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=99.75 E-value=1.7e-15 Score=128.73 Aligned_cols=294 Identities=14% Similarity=0.212 Sum_probs=200.2
Q ss_pred cCeEEcCCCCEEEEE------eC-----CeEEEEecCCCcEEEEee--cCcceeEEEEecCCCeEEEEeccCCeEEEEEc
Q 014755 11 GPSCFSPNARYIAVA------VD-----YRLVVRDAHSFKVVQLFS--CLDKISYIEWALDSEYILCGLYKRLMIQAWSL 77 (419)
Q Consensus 11 ~~~~~s~d~~~la~~------~~-----~~i~i~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~ 77 (419)
-.+-|||-|.+|.+= .+ -.+.+|+++++.....+. .... +++.|++|..+.|--.. +.+.+|++
T Consensus 77 ~~L~fSP~g~yL~T~e~~~i~~~~~~~~pn~~v~~vet~~~~s~~q~k~Q~~-W~~qfs~dEsl~arlv~--nev~f~~~ 153 (566)
T KOG2315|consen 77 YDLLFSPKGNYLLTWEPWAIYGPKNASNPNVLVYNVETGVQRSQIQKKMQNG-WVPQFSIDESLAARLVS--NEVQFYDL 153 (566)
T ss_pred eeeeecccccccccccccccccCCCCCCCceeeeeeccceehhheehhhhcC-cccccccchhhhhhhhc--ceEEEEec
Confidence 347899999999873 12 238899999955544443 2222 69999999877665443 57999999
Q ss_pred cCCcceeeeecCCccEeEEEECCCCC--EEEEE-----ecCCCeEEEEEcCCCeEEE----eccCCCCeeeEEEccCCCE
Q 014755 78 TQPEWTCKIDEGLAGIAYARWSPDSR--HILTT-----SDFQLRLTVWSLLNTACVH----VQSPKHASKGVAFTQDGKF 146 (419)
Q Consensus 78 ~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~-----~~~~~~i~iwd~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 146 (419)
.+.+.+ .-.-|...|..+.+||.+. .+++- |.-. .|++|....+..-. -......--.+.|++-|.-
T Consensus 154 ~~f~~~-~~kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa-~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~ 231 (566)
T KOG2315|consen 154 GSFKTI-QHKLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPA-SVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTA 231 (566)
T ss_pred CCccce-eeeeeccceeeEEecCCCCCceEEEEccCCCCCCc-EEEEeccccccccchhhhccccccceeEEEeccCCce
Confidence 875433 2224567899999999743 33331 2333 89999887322111 1222333356788887753
Q ss_pred -EEEEeec--------CCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEe
Q 014755 147 -AAICTRR--------DCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQ 217 (419)
Q Consensus 147 -l~~~~~~--------~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~ 217 (419)
|+.++.| -++.+++++++. ++....--...++|+++.|+|+++.+++.-+-.-..+.+||+.+..+..+.
T Consensus 232 LLvLastdVDktn~SYYGEq~Lyll~t~-g~s~~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~~v~df~ 310 (566)
T KOG2315|consen 232 LLVLASTDVDKTNASYYGEQTLYLLATQ-GESVSVPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGKPVFDFP 310 (566)
T ss_pred EEEEEEEeecCCCccccccceEEEEEec-CceEEEecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCCCCEeEeCC
Confidence 3333332 123478888888 444333334478999999999999988866777889999999999888775
Q ss_pred ecCCCCceeEEEEccCCCeEEEEEec---CcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCc
Q 014755 218 AYESGLGVKSISWSPCGQFLAVGSYD---QTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDD 294 (419)
Q Consensus 218 ~~~~~~~v~~~~~s~~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (419)
.. +-+++-|+|.|++|+.++.+ |.+.|||+.+.+++..+....
T Consensus 311 eg----pRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~------------------------------ 356 (566)
T KOG2315|consen 311 EG----PRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAAN------------------------------ 356 (566)
T ss_pred CC----CccceEECCCCCEEEEeecCCCCCceEEEeccchhhccccccCC------------------------------
Confidence 32 56789999999999988864 789999999988777664211
Q ss_pred cccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCC----CCceEEEeeccCCCce
Q 014755 295 FIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDS----MPTTLWIWDICRQEPA 370 (419)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d----~~~~i~iwd~~~~~~~ 370 (419)
-+-..|+|||+++++++.. .|+.++||+.. |.++
T Consensus 357 -----------------------------------------tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhyt-G~~l 394 (566)
T KOG2315|consen 357 -----------------------------------------TTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYT-GSLL 394 (566)
T ss_pred -----------------------------------------ceEEEEcCCCcEEEEEeccccEEecCCeEEEEec-Ccee
Confidence 2457999999999988642 13889999976 4444
Q ss_pred eecccCCCeeEEEeCC
Q 014755 371 AILVQKDPIRAATWDP 386 (419)
Q Consensus 371 ~~~~~~~~v~~~~~s~ 386 (419)
.........+.+.|-|
T Consensus 395 ~~~~f~sEL~qv~W~P 410 (566)
T KOG2315|consen 395 HEKMFKSELLQVEWRP 410 (566)
T ss_pred ehhhhhHhHhheeeee
Confidence 3332222677777764
No 247
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.75 E-value=6.3e-16 Score=122.20 Aligned_cols=251 Identities=14% Similarity=0.223 Sum_probs=176.7
Q ss_pred cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCe-EE--E-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEe
Q 014755 88 EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTA-CV--H-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLS 163 (419)
Q Consensus 88 ~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~-~~--~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d 163 (419)
....+|+|.+|++|...++++-... .|.||.....+ .. . +..|...+++++|+|..+.|++++.| ..-++|.
T Consensus 8 ~~~~pitchAwn~drt~iAv~~~~~-evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~d---rnayVw~ 83 (361)
T KOG1523|consen 8 RLLEPITCHAWNSDRTQIAVSPNNH-EVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHD---RNAYVWT 83 (361)
T ss_pred eccCceeeeeecCCCceEEeccCCc-eEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCC---CCccccc
Confidence 3457899999999999999998877 89999988766 22 2 77888999999999999999999998 6889998
Q ss_pred cc-C--CeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEE---eecCCCCceeEEEEccCCCeE
Q 014755 164 CH-T--WEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKY---QAYESGLGVKSISWSPCGQFL 237 (419)
Q Consensus 164 ~~-~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~---~~~~~~~~v~~~~~s~~~~~l 237 (419)
.. . +++...+..++...+++.|+|.++.+++ ++....|.++-.+++.---. ........|++++|+|++-+|
T Consensus 84 ~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAV--gSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLl 161 (361)
T KOG1523|consen 84 QPSGGTWKPTLVLLRINRAATCVKWSPKENKFAV--GSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLL 161 (361)
T ss_pred cCCCCeeccceeEEEeccceeeEeecCcCceEEe--ccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCccee
Confidence 83 3 4556667778899999999999999999 56567777776643322111 111223379999999999999
Q ss_pred EEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCC
Q 014755 238 AVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIP 317 (419)
Q Consensus 238 ~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (419)
++|+.|+..|||..- ++.++.. +.. .|.|..
T Consensus 162 aaGs~D~k~rVfSay----IK~Vdek-pap------------~pWgsk-------------------------------- 192 (361)
T KOG1523|consen 162 AAGSTDGKCRVFSAY----IKGVDEK-PAP------------TPWGSK-------------------------------- 192 (361)
T ss_pred cccccCcceeEEEEe----eeccccC-CCC------------CCCccC--------------------------------
Confidence 999999999999743 2222210 000 011100
Q ss_pred CCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCC-ceeec-ccCCCeeEEEeCCCCCeEEEEe
Q 014755 318 ISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQE-PAAIL-VQKDPIRAATWDPTCTRLVLCT 395 (419)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~-~~~~~-~~~~~v~~~~~s~~~~~l~s~~ 395 (419)
+|-.....+.....+++..+.|+|+|..|+..+.| ..+.+-|..... ..... ....+..++.|-.+.. ++.++
T Consensus 193 --~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hd--s~v~~~da~~p~~~v~~~~~~~lP~ls~~~ise~~-vv~ag 267 (361)
T KOG1523|consen 193 --MPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHD--STVSFVDAAGPSERVQSVATAQLPLLSVSWISENS-VVAAG 267 (361)
T ss_pred --CcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCC--CceEEeecCCCchhccchhhccCCceeeEeecCCc-eeecC
Confidence 00000111111256789999999999999999999 999999987764 22222 3347788888865443 44455
Q ss_pred CCC
Q 014755 396 GSS 398 (419)
Q Consensus 396 ~dg 398 (419)
.|.
T Consensus 268 ~~c 270 (361)
T KOG1523|consen 268 YDC 270 (361)
T ss_pred CCC
Confidence 553
No 248
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.74 E-value=9.1e-14 Score=112.56 Aligned_cols=237 Identities=15% Similarity=0.206 Sum_probs=169.4
Q ss_pred eEEcCCCCEEEEEe----CCeEEEEecCC--CcEEEEee---cCcceeEEEEecCCCeEEEEeccCCeEEEEEccC-Ccc
Q 014755 13 SCFSPNARYIAVAV----DYRLVVRDAHS--FKVVQLFS---CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQ-PEW 82 (419)
Q Consensus 13 ~~~s~d~~~la~~~----~~~i~i~~~~~--~~~~~~~~---~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~-~~~ 82 (419)
++|+|+++.|.++. ++.|.-|.++. |++...-. ...+-..++++++|++++++....|.|.++-+.. |.+
T Consensus 45 l~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l 124 (346)
T COG2706 45 LAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSL 124 (346)
T ss_pred EEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEEEcccCCcc
Confidence 99999999999985 35577766654 65544221 2234489999999999999999889999999965 432
Q ss_pred e--eeeecCCcc----------EeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE----eccCCCCeeeEEEccCCCE
Q 014755 83 T--CKIDEGLAG----------IAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH----VQSPKHASKGVAFTQDGKF 146 (419)
Q Consensus 83 ~--~~~~~~~~~----------v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 146 (419)
. ..+..|.+. +....+.|++++|+++.-....|.+|++..|.... ........+.+.|+|++++
T Consensus 125 ~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~ 204 (346)
T COG2706 125 QPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKY 204 (346)
T ss_pred ccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCccccccccccCCCCCcceEEEcCCCcE
Confidence 2 122334443 88899999999999986433389999999876654 2244556699999999999
Q ss_pred EEEEeecCCCCeEEEEeccCC-eEEEEEec---------cccceeeeeECCCCCeEEEEcCCCCceEEEEcC--CCceEE
Q 014755 147 AAICTRRDCKDYINLLSCHTW-EIMGVFAV---------DTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP--DGRCLL 214 (419)
Q Consensus 147 l~~~~~~~~~g~v~i~d~~~~-~~~~~~~~---------~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~--~~~~~~ 214 (419)
..+..+- +++|.+|..+.. ..+..++. .......+..+|||++|.+.+... ..|.+|.+ .+..+.
T Consensus 205 aY~v~EL--~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~-dsI~~f~V~~~~g~L~ 281 (346)
T COG2706 205 AYLVNEL--NSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGH-DSIAVFSVDPDGGKLE 281 (346)
T ss_pred EEEEecc--CCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCC-CeEEEEEEcCCCCEEE
Confidence 9888765 479999988763 22222221 234577899999999999976554 47888877 444444
Q ss_pred EEeec-CCCCceeEEEEccCCCeEEEEEec-CcEEEEEcC
Q 014755 215 KYQAY-ESGLGVKSISWSPCGQFLAVGSYD-QTLRVLNHL 252 (419)
Q Consensus 215 ~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d-~~i~v~d~~ 252 (419)
..... .+....+.+.++|.|++|+++..+ ..|.+|...
T Consensus 282 ~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d 321 (346)
T COG2706 282 LVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERD 321 (346)
T ss_pred EEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEc
Confidence 33322 222257899999999999988865 468888654
No 249
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.74 E-value=1.1e-15 Score=119.97 Aligned_cols=163 Identities=17% Similarity=0.315 Sum_probs=117.7
Q ss_pred eEEEEecCCCeEEEEecc---------CCeEEEEEccCC-cceeeeec-CCccEeEEEECCCCCEEEEEe-cCCCeEEEE
Q 014755 51 SYIEWALDSEYILCGLYK---------RLMIQAWSLTQP-EWTCKIDE-GLAGIAYARWSPDSRHILTTS-DFQLRLTVW 118 (419)
Q Consensus 51 ~~~~~s~~~~~l~~~~~~---------~g~i~iw~~~~~-~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-~~~~~i~iw 118 (419)
..+.|+|+|++|++-... -|...+|.++.. .....+.. ..++|.+++|+|+|+.++++. .....+.+|
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ly 88 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLY 88 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEE
Confidence 467788888887765431 134556655322 23333432 345799999999999987663 323389999
Q ss_pred EcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCC
Q 014755 119 SLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSP 198 (419)
Q Consensus 119 d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 198 (419)
|++. +.+. .........+.|+|+|+++++++.++..|.|.+||.++.+.+..... ..+..++|+|+|++++++...
T Consensus 89 d~~~-~~i~-~~~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~--~~~t~~~WsPdGr~~~ta~t~ 164 (194)
T PF08662_consen 89 DVKG-KKIF-SFGTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEH--SDATDVEWSPDGRYLATATTS 164 (194)
T ss_pred cCcc-cEeE-eecCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeecccc--CcEEEEEEcCCCCEEEEEEec
Confidence 9973 3333 22355678999999999999998765568899999998888776653 357899999999999986543
Q ss_pred ----CCceEEEEcCCCceEEEEe
Q 014755 199 ----LEYKVLIYSPDGRCLLKYQ 217 (419)
Q Consensus 199 ----~~~~i~~~d~~~~~~~~~~ 217 (419)
.|+.+++|+..|+.+....
T Consensus 165 ~r~~~dng~~Iw~~~G~~l~~~~ 187 (194)
T PF08662_consen 165 PRLRVDNGFKIWSFQGRLLYKKP 187 (194)
T ss_pred cceeccccEEEEEecCeEeEecc
Confidence 4788999999998776654
No 250
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.74 E-value=4.2e-16 Score=131.53 Aligned_cols=236 Identities=16% Similarity=0.182 Sum_probs=154.2
Q ss_pred cCCCCEEEEEeCCeEEEEecCCCcEEE------EeecCcceeEEEE-----ecCCCeEEEEeccCCeEEEEEccCCccee
Q 014755 16 SPNARYIAVAVDYRLVVRDAHSFKVVQ------LFSCLDKISYIEW-----ALDSEYILCGLYKRLMIQAWSLTQPEWTC 84 (419)
Q Consensus 16 s~d~~~la~~~~~~i~i~~~~~~~~~~------~~~~~~~v~~~~~-----s~~~~~l~~~~~~~g~i~iw~~~~~~~~~ 84 (419)
+-.|++|.+.-...+++|+...+..+. .+...+ ..|=+| .|++--|+.+-.. |.|.+.|....+..+
T Consensus 132 ~~~gd~lcFnvg~~lyv~~~~g~~~~~~pi~k~~y~gt~-P~cHdfn~~~a~~~g~dllIGf~t-Gqvq~idp~~~~~sk 209 (636)
T KOG2394|consen 132 SGKGDRLCFNVGRELYVYSYRGAADLSKPIDKREYKGTS-PTCHDFNSFTATPKGLDLLIGFTT-GQVQLIDPINFEVSK 209 (636)
T ss_pred cCCCCEEEEecCCeEEEEEccCcchhccchhhhcccCCC-CceecccccccCCCCcceEEeecc-CceEEecchhhHHHH
Confidence 345678888877789999887543221 222222 223333 3456667777644 889999876633221
Q ss_pred ee----ecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEE
Q 014755 85 KI----DEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYIN 160 (419)
Q Consensus 85 ~~----~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~ 160 (419)
.+ ......++++.|-|.+..++.++...|.+++||.+-- ......+....+++..+......
T Consensus 210 lfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~-------~~~t~p~~~~~k~~~~f~i~t~k------- 275 (636)
T KOG2394|consen 210 LFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIV-------CGATAPSYQALKDGDQFAILTSK------- 275 (636)
T ss_pred hhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeecccc-------ccCCCCcccccCCCCeeEEeeee-------
Confidence 11 1123679999999977766666554458999987210 01111222233455555544321
Q ss_pred EEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEE
Q 014755 161 LLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAV 239 (419)
Q Consensus 161 i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 239 (419)
...+..++..+......|...+|+|||++|++ .+.||.+++||. +.+++..+...-. ...|++|||||+||++
T Consensus 276 --sk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~--VSqDGfLRvF~fdt~eLlg~mkSYFG--GLLCvcWSPDGKyIvt 349 (636)
T KOG2394|consen 276 --SKKTRNPVARWHIGEGSINEFAFSPDGKYLAT--VSQDGFLRIFDFDTQELLGVMKSYFG--GLLCVCWSPDGKYIVT 349 (636)
T ss_pred --ccccCCccceeEeccccccceeEcCCCceEEE--EecCceEEEeeccHHHHHHHHHhhcc--ceEEEEEcCCccEEEe
Confidence 00112455555555678999999999999999 778999999999 4444444433333 7999999999999999
Q ss_pred EEecCcEEEEEcCCceeeeeec-ccccccCCCccceecc
Q 014755 240 GSYDQTLRVLNHLTWKTFAEFM-HLSTVRGPCFPAVFKE 277 (419)
Q Consensus 240 ~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 277 (419)
|++|.-|.||.+..++.+..-+ |...|. .++|.+
T Consensus 350 GGEDDLVtVwSf~erRVVARGqGHkSWVs----~VaFDp 384 (636)
T KOG2394|consen 350 GGEDDLVTVWSFEERRVVARGQGHKSWVS----VVAFDP 384 (636)
T ss_pred cCCcceEEEEEeccceEEEecccccccee----eEeecc
Confidence 9999999999999999888777 777763 356654
No 251
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=99.74 E-value=2.4e-15 Score=120.98 Aligned_cols=239 Identities=13% Similarity=0.189 Sum_probs=163.1
Q ss_pred cccCeEEcCC-CCEEEEEeCCeEEEEecCC----CcE--------EEEee--cCcceeEEEEecCCCeEEEEeccCCeEE
Q 014755 9 QTGPSCFSPN-ARYIAVAVDYRLVVRDAHS----FKV--------VQLFS--CLDKISYIEWALDSEYILCGLYKRLMIQ 73 (419)
Q Consensus 9 ~~~~~~~s~d-~~~la~~~~~~i~i~~~~~----~~~--------~~~~~--~~~~v~~~~~s~~~~~l~~~~~~~g~i~ 73 (419)
...+++|-|. ++-|++|....|.||.... +.. .+.+. ...+|++|+|.+||..+++++.++..|.
T Consensus 142 nvtclawRPlsaselavgCr~gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~gsssi~ 221 (445)
T KOG2139|consen 142 NVTCLAWRPLSASELAVGCRAGICIWSDSRTLNANRNIRMMSTHHLQVLQDPGHNPVTSMQWNEDGTILVTASFGSSSIM 221 (445)
T ss_pred ceeEEEeccCCcceeeeeecceeEEEEcCcccccccccccccccchhheeCCCCceeeEEEEcCCCCEEeecccCcceEE
Confidence 3445899994 5788999999999997642 111 11222 3368999999999999999999888999
Q ss_pred EEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC-CeEEEeccCCCCeeeEEEccCCCEEEEEee
Q 014755 74 AWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN-TACVHVQSPKHASKGVAFTQDGKFAAICTR 152 (419)
Q Consensus 74 iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 152 (419)
|||.+++..+.......+.+.-+.||||+.+|+++.-|. ..++|+... ....+.....+.+...+|+|+|++|+.+..
T Consensus 222 iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~da-vfrlw~e~q~wt~erw~lgsgrvqtacWspcGsfLLf~~s 300 (445)
T KOG2139|consen 222 IWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDA-VFRLWQENQSWTKERWILGSGRVQTACWSPCGSFLLFACS 300 (445)
T ss_pred EEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccc-eeeeehhcccceecceeccCCceeeeeecCCCCEEEEEEc
Confidence 999999987655545667899999999999999999888 999996543 444443444458999999999998887765
Q ss_pred cCCCCeEEEEeccC----Ce-----------EEEEEe-----c----cccceeeeeECCCCCeEEEEcCCCC------ce
Q 014755 153 RDCKDYINLLSCHT----WE-----------IMGVFA-----V----DTLDLADIEWSPDDSAIVIWDSPLE------YK 202 (419)
Q Consensus 153 ~~~~g~v~i~d~~~----~~-----------~~~~~~-----~----~~~~v~~~~~~~~~~~l~~~~~~~~------~~ 202 (419)
|.-++|.+.. .. ++..+. . -.+++.+++|.|.|.++++.--..+ ..
T Consensus 301 ----gsp~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~ 376 (445)
T KOG2139|consen 301 ----GSPRLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLH 376 (445)
T ss_pred ----CCceEEEEeecCCCccccCcccceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhh
Confidence 3445554421 00 001110 0 1356889999999999987322222 34
Q ss_pred EEEEcCCCceEEEEe--ecCCCCceeEEEEcc---CCCeEEEEEecCcEEEEEcC
Q 014755 203 VLIYSPDGRCLLKYQ--AYESGLGVKSISWSP---CGQFLAVGSYDQTLRVLNHL 252 (419)
Q Consensus 203 i~~~d~~~~~~~~~~--~~~~~~~v~~~~~s~---~~~~l~~~~~d~~i~v~d~~ 252 (419)
|.+||........+. +.........+.|+| ++.+|..+=..|.+.-|++.
T Consensus 377 i~~fdtr~sp~vels~cg~i~ge~P~~IsF~pl~n~g~lLsiaWsTGriq~ypl~ 431 (445)
T KOG2139|consen 377 ISRFDTRKSPPVELSYCGMIGGEYPAYISFGPLKNEGRLLSIAWSTGRIQRYPLT 431 (445)
T ss_pred hhhhcccccCceEEEecccccCCCCceEEeeecccCCcEEEEEeccCceEeeeeE
Confidence 667777333333332 222222355677776 45667666667888877753
No 252
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.71 E-value=1.2e-14 Score=134.33 Aligned_cols=238 Identities=11% Similarity=0.042 Sum_probs=159.5
Q ss_pred eEEcC-CCCEEEEEe-CCeEEEEecCCCc-------EEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC--
Q 014755 13 SCFSP-NARYIAVAV-DYRLVVRDAHSFK-------VVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP-- 80 (419)
Q Consensus 13 ~~~s~-d~~~la~~~-~~~i~i~~~~~~~-------~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~-- 80 (419)
++.++ ++.++++|+ ||+|++|+..... ...++. ....+.++.+.+.++.+|+++.| |.|++.+++-.
T Consensus 1054 ~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~D-G~v~~~~id~~~~ 1132 (1431)
T KOG1240|consen 1054 LAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKD-GSVRVLRIDHYNV 1132 (1431)
T ss_pred eeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCC-CeEEEEEcccccc
Confidence 45554 569999998 8999999976321 122333 56789999999999999999866 99999998752
Q ss_pred c-----ceeeeecCC-cc-EeEEEECCC-CC-EEEEEecCCCeEEEEEcCCCeEEE---eccCCCCeeeEEEccCCCEEE
Q 014755 81 E-----WTCKIDEGL-AG-IAYARWSPD-SR-HILTTSDFQLRLTVWSLLNTACVH---VQSPKHASKGVAFTQDGKFAA 148 (419)
Q Consensus 81 ~-----~~~~~~~~~-~~-v~~~~~~~~-~~-~l~~~~~~~~~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~ 148 (419)
+ ..+....+. +. +..-+|... .. .++.+...+ .|..||++...... .....+.+++++.+|.+.+++
T Consensus 1133 ~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~-~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~Wlv 1211 (1431)
T KOG1240|consen 1133 SKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLS-RIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLV 1211 (1431)
T ss_pred ccceeeeeecccccCCCceEEeecccccccceeEEEEEecc-ceEEecchhhhhHHhhhcCccccceeEEEecCCceEEE
Confidence 1 111111122 22 334444443 23 455555555 89999998754333 344556789999999999999
Q ss_pred EEeecCCCCeEEEEeccCCeEEEEEec-cccceeeeeECCCCC---eEEEEcCCCCceEEEEcC-CCceEEEEeecCC--
Q 014755 149 ICTRRDCKDYINLLSCHTWEIMGVFAV-DTLDLADIEWSPDDS---AIVIWDSPLEYKVLIYSP-DGRCLLKYQAYES-- 221 (419)
Q Consensus 149 ~~~~~~~~g~v~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~---~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~-- 221 (419)
.|+.. |.+.+||++-+.++..+.. +..+++.+..+|-.+ ..++...+..+.|.+|++ +|.....+.....
T Consensus 1212 iGts~---G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p 1288 (1431)
T KOG1240|consen 1212 IGTSR---GQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLRQTVLWASDGAP 1288 (1431)
T ss_pred EecCC---ceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccCcceEEEEcCCCCc
Confidence 99876 8999999999888877653 346677777666443 444433336789999999 6655555543311
Q ss_pred ---------------CCceeEEEEccCCCeEEEEEecCcEEEEEcCCce
Q 014755 222 ---------------GLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWK 255 (419)
Q Consensus 222 ---------------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~ 255 (419)
........+...+.++++|+.|..|+.||....+
T Consensus 1289 ~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~ 1337 (1431)
T KOG1240|consen 1289 ILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPE 1337 (1431)
T ss_pred chhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCcc
Confidence 0111222333345688999999999999987544
No 253
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=99.71 E-value=5.7e-15 Score=125.83 Aligned_cols=247 Identities=11% Similarity=0.079 Sum_probs=169.3
Q ss_pred hhhcccccC---eEEcCCCCEEEEEe--CCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEc
Q 014755 4 TEAYKQTGP---SCFSPNARYIAVAV--DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSL 77 (419)
Q Consensus 4 ~~~~~~~~~---~~~s~d~~~la~~~--~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~ 77 (419)
.+-+.+... |..||||+|+.+.+ .-.|++||+....+.-... ....|.-.-++.|-..++.-..| .+|.+-..
T Consensus 45 iQdfe~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~D-R~IefHak 123 (703)
T KOG2321|consen 45 IQDFEMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQND-RTIEFHAK 123 (703)
T ss_pred HHhcCCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecC-ceeeehhh
Confidence 344555444 89999999988776 5679999998765443322 23445555666666666666555 46665432
Q ss_pred cCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCC
Q 014755 78 TQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCK 156 (419)
Q Consensus 78 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 156 (419)
.|... .+. -+..-..++++.-.--|+.++... .|+-++++.|..+. +......++++..++...+|++|+.+
T Consensus 124 -~G~hy-~~R-IP~~GRDm~y~~~scDly~~gsg~-evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~--- 196 (703)
T KOG2321|consen 124 -YGRHY-RTR-IPKFGRDMKYHKPSCDLYLVGSGS-EVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTED--- 196 (703)
T ss_pred -cCeee-eee-cCcCCccccccCCCccEEEeecCc-ceEEEEccccccccccccccccceeeeecCccceEEecccC---
Confidence 22211 111 111223455544333345444434 79999999998887 66666888999999999999999876
Q ss_pred CeEEEEeccCCeEEEEEecc------c-----cceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCce
Q 014755 157 DYINLLSCHTWEIMGVFAVD------T-----LDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGV 225 (419)
Q Consensus 157 g~v~i~d~~~~~~~~~~~~~------~-----~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v 225 (419)
|.|..||.+....+..+... . ..|+++.|+.+|-.+++ ++..|.+++||+..........|....+|
T Consensus 197 g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aV--Gts~G~v~iyDLRa~~pl~~kdh~~e~pi 274 (703)
T KOG2321|consen 197 GVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAV--GTSTGSVLIYDLRASKPLLVKDHGYELPI 274 (703)
T ss_pred ceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEe--eccCCcEEEEEcccCCceeecccCCccce
Confidence 89999999987766665432 2 23899999999999999 88899999999933333344556666689
Q ss_pred eEEEEccCC--CeEEEEEecCcEEEEEcCCceeeeeec
Q 014755 226 KSISWSPCG--QFLAVGSYDQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 226 ~~~~~s~~~--~~l~~~~~d~~i~v~d~~~~~~~~~~~ 261 (419)
..+.|.+.+ +.+++.. ...++|||-.+|+....++
T Consensus 275 ~~l~~~~~~~q~~v~S~D-k~~~kiWd~~~Gk~~asiE 311 (703)
T KOG2321|consen 275 KKLDWQDTDQQNKVVSMD-KRILKIWDECTGKPMASIE 311 (703)
T ss_pred eeecccccCCCceEEecc-hHHhhhcccccCCceeecc
Confidence 999998763 3454443 4589999999998877765
No 254
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.69 E-value=2.4e-13 Score=119.96 Aligned_cols=218 Identities=13% Similarity=0.078 Sum_probs=150.8
Q ss_pred eEEEEecCCCcEEEEeecCcceeEEEEecCCCe-EEEEecc--CCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEE
Q 014755 29 RLVVRDAHSFKVVQLFSCLDKISYIEWALDSEY-ILCGLYK--RLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHI 105 (419)
Q Consensus 29 ~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~~~--~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 105 (419)
.|.+-|.+.......... +......|+|||+. ++..+.+ +..|.++|+.+++.. .+....+......|+|||+.+
T Consensus 170 ~l~~~d~dg~~~~~~~~~-~~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~-~lt~~~g~~~~~~~SPDG~~l 247 (419)
T PRK04043 170 NIVLADYTLTYQKVIVKG-GLNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKE-KIASSQGMLVVSDVSKDGSKL 247 (419)
T ss_pred eEEEECCCCCceeEEccC-CCeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEE-EEecCCCcEEeeEECCCCCEE
Confidence 577778776655544444 47889999999985 6655544 357999999888654 444455556778899999988
Q ss_pred EEEecC--CCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeee
Q 014755 106 LTTSDF--QLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADI 183 (419)
Q Consensus 106 ~~~~~~--~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~ 183 (419)
+..... ...|.++|+.+++..++...........|+|||+.|+..+...+...|+++|+.+++..+...... ...
T Consensus 248 a~~~~~~g~~~Iy~~dl~~g~~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~g~---~~~ 324 (419)
T PRK04043 248 LLTMAPKGQPDIYLYDTNTKTLTQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFHGK---NNS 324 (419)
T ss_pred EEEEccCCCcEEEEEECCCCcEEEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccCCC---cCc
Confidence 766432 237888899888877765554444567899999999998865444479999998877644433211 235
Q ss_pred eECCCCCeEEEEcCCC------C-ceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecC---cEEEEEcCC
Q 014755 184 EWSPDDSAIVIWDSPL------E-YKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQ---TLRVLNHLT 253 (419)
Q Consensus 184 ~~~~~~~~l~~~~~~~------~-~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~---~i~v~d~~~ 253 (419)
.|+|||+.++...... . ..|++.|+.+...+.+.... ......|+|||+.|+..+.++ .+.+.++..
T Consensus 325 ~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~~LT~~~---~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g 401 (419)
T PRK04043 325 SVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIRRLTANG---VNQFPRFSSDGGSIMFIKYLGNQSALGIIRLNY 401 (419)
T ss_pred eECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeEECCCCC---CcCCeEECCCCCEEEEEEccCCcEEEEEEecCC
Confidence 8999999998754332 1 47899998444455555432 234689999999888776532 466777754
Q ss_pred c
Q 014755 254 W 254 (419)
Q Consensus 254 ~ 254 (419)
.
T Consensus 402 ~ 402 (419)
T PRK04043 402 N 402 (419)
T ss_pred C
Confidence 3
No 255
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=99.69 E-value=6.2e-14 Score=119.19 Aligned_cols=287 Identities=14% Similarity=0.281 Sum_probs=192.3
Q ss_pred eeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEec----------CCCeEEEEE
Q 014755 50 ISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSD----------FQLRLTVWS 119 (419)
Q Consensus 50 v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------~~~~i~iwd 119 (419)
-+-+.|||-|.||++--.. -|.+|-=.+-..++++ .|. .|.-+.|||..++|++-+. ++..++|||
T Consensus 213 etyv~wSP~GTYL~t~Hk~--GI~lWGG~~f~r~~RF-~Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWD 288 (698)
T KOG2314|consen 213 ETYVRWSPKGTYLVTFHKQ--GIALWGGESFDRIQRF-YHP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWD 288 (698)
T ss_pred eeeEEecCCceEEEEEecc--ceeeecCccHHHHHhc-cCC-CceeeecCCccceEEEecCCccccCcccCCCceEEEEE
Confidence 4678999999999998754 4999975555544444 343 5788999999999998652 334899999
Q ss_pred cCCCeEEE-eccCCC--Ce-eeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEE
Q 014755 120 LLNTACVH-VQSPKH--AS-KGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIW 195 (419)
Q Consensus 120 ~~~~~~~~-~~~~~~--~~-~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 195 (419)
+.+|...+ +..... .. .-+.||.|++++|....+ .|.||+..+..++..-...-..|....|+|.+..|+.|
T Consensus 289 I~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~----sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYw 364 (698)
T KOG2314|consen 289 IATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGN----SISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYW 364 (698)
T ss_pred ccccchhcceeccCCCccccceEEeccCCceeEEeccc----eEEEEecCceeeecccccCCccccCcccCCCcceEEEE
Confidence 99998887 443222 22 678999999999998874 89999987755544433445678999999999999998
Q ss_pred cCCCC---ceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEec-------C---cEEEEEcCCceeeeeec
Q 014755 196 DSPLE---YKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYD-------Q---TLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 196 ~~~~~---~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-------~---~i~v~d~~~~~~~~~~~ 261 (419)
....+ ..+.+..+ +++.++....+.- .-..+-|-.+|.+|+.--.- | .+.|+.++...
T Consensus 365 tpe~~~~parvtL~evPs~~~iRt~nlfnV--sDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKd------ 436 (698)
T KOG2314|consen 365 TPETNNIPARVTLMEVPSKREIRTKNLFNV--SDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKD------ 436 (698)
T ss_pred cccccCCcceEEEEecCccceeeeccceee--eccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccC------
Confidence 76654 45777777 6676666554432 22346677888888764321 0 11222221100
Q ss_pred ccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEE
Q 014755 262 HLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSW 341 (419)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 341 (419)
+ |...+ .-...|...+|
T Consensus 437 ----I--pve~v---------------------------------------------------------elke~vi~FaW 453 (698)
T KOG2314|consen 437 ----I--PVEVV---------------------------------------------------------ELKESVIAFAW 453 (698)
T ss_pred ----C--Cceee---------------------------------------------------------ecchheeeeee
Confidence 0 00000 12334778899
Q ss_pred ccCCeEEEEecC-CCCceEEEeeccC-CCceeec-c-cCCCeeEEEeCCCCCeEEEEe---CCCcEEEeecCCCeEEecC
Q 014755 342 SSDSQYICTRND-SMPTTLWIWDICR-QEPAAIL-V-QKDPIRAATWDPTCTRLVLCT---GSSHLYMWTPSGAYCVSNP 414 (419)
Q Consensus 342 s~~g~~l~~~~~-d~~~~i~iwd~~~-~~~~~~~-~-~~~~v~~~~~s~~~~~l~s~~---~dg~i~vw~~~~~~~~~~~ 414 (419)
-|.|..+++-+. +...++.+|.+++ .....+. . .....+.+.|+|.|++++.+. ..|.+.++|..-..+..+.
T Consensus 454 EP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~ 533 (698)
T KOG2314|consen 454 EPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDKKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTA 533 (698)
T ss_pred ccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcccccceEEEcCCCcEEEEEEecccccceEEEecchhhhhhcc
Confidence 999988776543 2336799998884 2222222 1 335677899999999887764 5788999999854444443
Q ss_pred C
Q 014755 415 L 415 (419)
Q Consensus 415 ~ 415 (419)
.
T Consensus 534 ~ 534 (698)
T KOG2314|consen 534 S 534 (698)
T ss_pred C
Confidence 3
No 256
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.67 E-value=7.1e-14 Score=123.23 Aligned_cols=201 Identities=10% Similarity=-0.001 Sum_probs=142.0
Q ss_pred eEEcCCCCE-EEEEe-C---CeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccC--CeEEEEEccCCcceee
Q 014755 13 SCFSPNARY-IAVAV-D---YRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKR--LMIQAWSLTQPEWTCK 85 (419)
Q Consensus 13 ~~~s~d~~~-la~~~-~---~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~--g~i~iw~~~~~~~~~~ 85 (419)
..|||||+. +++.+ + ..|+++|+.+++...+....+......|+|||+.|+.....+ ..|.++++.+++. ..
T Consensus 193 p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~-~~ 271 (419)
T PRK04043 193 PKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTL-TQ 271 (419)
T ss_pred EEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEecCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcE-EE
Confidence 679999985 66554 3 349999999999888776666677889999999888665332 4688888877764 45
Q ss_pred eecCCccEeEEEECCCCCEEEEEecCCC--eEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecC------CCC
Q 014755 86 IDEGLAGIAYARWSPDSRHILTTSDFQL--RLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRD------CKD 157 (419)
Q Consensus 86 ~~~~~~~v~~~~~~~~~~~l~~~~~~~~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~g 157 (419)
+..+........|+|||+.|+..+...+ .|.+.|+.+++..++..... ....|+|||+.|+...... ...
T Consensus 272 LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~g~--~~~~~SPDG~~Ia~~~~~~~~~~~~~~~ 349 (419)
T PRK04043 272 ITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQVVFHGK--NNSSVSTYKNYIVYSSRETNNEFGKNTF 349 (419)
T ss_pred cccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEeCccCCC--cCceECCCCCEEEEEEcCCCcccCCCCc
Confidence 5555443456789999999998875432 68888998888766433222 2358999999998887542 113
Q ss_pred eEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCC-CceEEEEcCCCceEEEEee
Q 014755 158 YINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPL-EYKVLIYSPDGRCLLKYQA 218 (419)
Q Consensus 158 ~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~~~i~~~d~~~~~~~~~~~ 218 (419)
.|.+.|+.+++.. .+... .......|+|||+.+++..... ...+.+++++|.....+..
T Consensus 350 ~I~v~d~~~g~~~-~LT~~-~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g~~~~~l~~ 409 (419)
T PRK04043 350 NLYLISTNSDYIR-RLTAN-GVNQFPRFSSDGGSIMFIKYLGNQSALGIIRLNYNKSFLFPL 409 (419)
T ss_pred EEEEEECCCCCeE-ECCCC-CCcCCeEECCCCCEEEEEEccCCcEEEEEEecCCCeeEEeec
Confidence 7899999887653 33332 2334689999999888754332 2457788888876666654
No 257
>KOG1354 consensus Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.67 E-value=4.1e-14 Score=113.25 Aligned_cols=289 Identities=12% Similarity=0.164 Sum_probs=179.3
Q ss_pred cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCc-----ceeeeecCC------------ccEeEEEECCCCC--EEE
Q 014755 46 CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPE-----WTCKIDEGL------------AGIAYARWSPDSR--HIL 106 (419)
Q Consensus 46 ~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~-----~~~~~~~~~------------~~v~~~~~~~~~~--~l~ 106 (419)
..+-|.++.|...|.+||+|..+ |.|.++.-+... ....++.|. ..|..+.|.+++. .++
T Consensus 24 eadiis~vef~~~Ge~LatGdkg-GRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FL 102 (433)
T KOG1354|consen 24 EADIISAVEFDHYGERLATGDKG-GRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFL 102 (433)
T ss_pred hhcceeeEEeecccceEeecCCC-CeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEE
Confidence 45678999999999999999876 899998754332 122233332 3578899988654 455
Q ss_pred EEecCCCeEEEEEcCCCeEEE------eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEE-Eeccccc
Q 014755 107 TTSDFQLRLTVWSLLNTACVH------VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGV-FAVDTLD 179 (419)
Q Consensus 107 ~~~~~~~~i~iwd~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~-~~~~~~~ 179 (419)
....+. +|++|.+....... .......+.++.. .+.+..+ .+.. ..+.+. -..|...
T Consensus 103 lstNdk-tiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~------p~~~~~~----~~ve-----a~prRv~aNaHtyh 166 (433)
T KOG1354|consen 103 LSTNDK-TIKLWKIRERGSKKEGYNLPEEGPPGTITSLRL------PVEGRHD----LEVE-----ASPRRVYANAHTYH 166 (433)
T ss_pred EecCCc-ceeeeeeeccccccccccccccCCCCccceeec------eeecccc----ceee-----eeeeeeccccceeE
Confidence 556677 99999987643322 1111111222211 0111100 0000 011122 2357788
Q ss_pred eeeeeECCCCCeEEEEcCCCCceEEEEcC--CCceEEEEeecCCC-----CceeEEEEccC-CCeEEEEEecCcEEEEEc
Q 014755 180 LADIEWSPDDSAIVIWDSPLEYKVLIYSP--DGRCLLKYQAYESG-----LGVKSISWSPC-GQFLAVGSYDQTLRVLNH 251 (419)
Q Consensus 180 v~~~~~~~~~~~l~~~~~~~~~~i~~~d~--~~~~~~~~~~~~~~-----~~v~~~~~s~~-~~~l~~~~~d~~i~v~d~ 251 (419)
|.++.++.|+..++.+ .|-.|.+|++ ..+........... .-|++..|+|. .+.++..+..|+|++-|+
T Consensus 167 iNSIS~NsD~Et~lSA---DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDm 243 (433)
T KOG1354|consen 167 INSISVNSDKETFLSA---DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDM 243 (433)
T ss_pred eeeeeecCccceEeec---cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeec
Confidence 9999999999999873 3789999998 44433333222211 25888999995 467888888999999998
Q ss_pred CCceeeeeec--ccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCC
Q 014755 252 LTWKTFAEFM--HLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDK 329 (419)
Q Consensus 252 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (419)
+....-.... ...+ ..|...--|+
T Consensus 244 R~~aLCd~hsKlfEep-edp~~rsffs----------------------------------------------------- 269 (433)
T KOG1354|consen 244 RQSALCDAHSKLFEEP-EDPSSRSFFS----------------------------------------------------- 269 (433)
T ss_pred hhhhhhcchhhhhccc-cCCcchhhHH-----------------------------------------------------
Confidence 8543211110 0000 0011111111
Q ss_pred CCCCcceEEEEEccCCeEEEEecCCCCceEEEeecc-CCCceeecc-cC------------CCe---eEEEeCCCCCeEE
Q 014755 330 PNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDIC-RQEPAAILV-QK------------DPI---RAATWDPTCTRLV 392 (419)
Q Consensus 330 ~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~-~~~~~~~~~-~~------------~~v---~~~~~s~~~~~l~ 392 (419)
.--..|.++.||++|+|+++-.. -+|++||+. ..+++.++. |. ..| ..++|+-++.+++
T Consensus 270 -eiIsSISDvKFs~sGryilsRDy---ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~ 345 (433)
T KOG1354|consen 270 -EIISSISDVKFSHSGRYILSRDY---LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVM 345 (433)
T ss_pred -HHhhhhhceEEccCCcEEEEecc---ceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEe
Confidence 11234789999999999999987 799999994 344444432 22 223 3588999999999
Q ss_pred EEeCCCcEEEeecCCCeEEe
Q 014755 393 LCTGSSHLYMWTPSGAYCVS 412 (419)
Q Consensus 393 s~~~dg~i~vw~~~~~~~~~ 412 (419)
+|+....++++++..|....
T Consensus 346 TGsy~n~frvf~~~~gsk~d 365 (433)
T KOG1354|consen 346 TGSYNNVFRVFNLARGSKED 365 (433)
T ss_pred cccccceEEEecCCCCccee
Confidence 99999999999977554433
No 258
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=99.67 E-value=3.3e-13 Score=113.73 Aligned_cols=298 Identities=16% Similarity=0.243 Sum_probs=202.5
Q ss_pred eEEcCCCCEEEEEe----------------CCeEEEEecCCCcEEEEeecC-cc--ee-EEEEecCCCeEEEEeccCCeE
Q 014755 13 SCFSPNARYIAVAV----------------DYRLVVRDAHSFKVVQLFSCL-DK--IS-YIEWALDSEYILCGLYKRLMI 72 (419)
Q Consensus 13 ~~~s~d~~~la~~~----------------~~~i~i~~~~~~~~~~~~~~~-~~--v~-~~~~s~~~~~l~~~~~~~g~i 72 (419)
+.|||+++||.+=+ ++.+.+||+.++.++..+... .+ .+ -+.|+-+.+++|-... ..+
T Consensus 77 ~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv~--~sl 154 (561)
T COG5354 77 LDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARVVG--SSL 154 (561)
T ss_pred cccCcccceeeeeccCCccChhhccCCccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhhcc--CeE
Confidence 78999999999854 224889999999998876532 22 34 7889999998886654 379
Q ss_pred EEEEccCCcce-eeeecC-CccEeEEEECCCC--CEEEEE-----ecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEcc
Q 014755 73 QAWSLTQPEWT-CKIDEG-LAGIAYARWSPDS--RHILTT-----SDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQ 142 (419)
Q Consensus 73 ~iw~~~~~~~~-~~~~~~-~~~v~~~~~~~~~--~~l~~~-----~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~ 142 (419)
.|+++ ++... ..+... ...+....|+|.+ ..|++- +... ++++|.+..+..+. ....+..-..+.|.+
T Consensus 155 ~i~e~-t~n~~~~p~~~lr~~gi~dFsisP~~n~~~la~~tPEk~~kpa-~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~ 232 (561)
T COG5354 155 YIHEI-TDNIEEHPFKNLRPVGILDFSISPEGNHDELAYWTPEKLNKPA-MVRILSIPKNSVLVTKNLFKVSGVQLKWQV 232 (561)
T ss_pred EEEec-CCccccCchhhccccceeeEEecCCCCCceEEEEccccCCCCc-EEEEEEccCCCeeeeeeeEeecccEEEEec
Confidence 99997 33221 111111 2568889999964 334443 2334 89999998776665 333333446788999
Q ss_pred CCCEEEEEeecC--------CCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEE
Q 014755 143 DGKFAAICTRRD--------CKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLL 214 (419)
Q Consensus 143 ~~~~l~~~~~~~--------~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~ 214 (419)
.|+++++-.... ++..++|++++.... .....-.++|...+|.|.++.+++..+.....+.++|+.++...
T Consensus 233 ~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i-~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~Nl~~ 311 (561)
T COG5354 233 LGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSI-PVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGNLRF 311 (561)
T ss_pred CCceEEEEEEEeeecccceeccceEEEEeeccccc-ceeccccccceeeeecccCCceeEEecccccceeecccccceEE
Confidence 998877643221 124788888874333 33224468999999999999999877778899999999888655
Q ss_pred EEeecCCCCceeEEEEccCCCeEEEEEec---CcEEEEEcCCceeee-eecccccccCCCccceeccCCCcccccceeee
Q 014755 215 KYQAYESGLGVKSISWSPCGQFLAVGSYD---QTLRVLNHLTWKTFA-EFMHLSTVRGPCFPAVFKEVDEPLQLDMSELC 290 (419)
Q Consensus 215 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---~~i~v~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (419)
.+... .=+.+.|+|.+++++.++.| |.+.+||......+. .+..
T Consensus 312 ~~Pe~----~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~---------------------------- 359 (561)
T COG5354 312 YFPEQ----KRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNG---------------------------- 359 (561)
T ss_pred ecCCc----ccccccccCcccEEEEecCCccccceEEeccCCceEEEEEeec----------------------------
Confidence 54432 34568899999999998876 679999976543322 2210
Q ss_pred ccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCC----CCceEEEeeccC
Q 014755 291 LNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDS----MPTTLWIWDICR 366 (419)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d----~~~~i~iwd~~~ 366 (419)
...+-+.||||++++.+.... .|+.|.|||+..
T Consensus 360 -------------------------------------------~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g 396 (561)
T COG5354 360 -------------------------------------------LNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYG 396 (561)
T ss_pred -------------------------------------------CCceEeeccCCceEEEecCCCcccccCcceEEEEecC
Confidence 012456899999998776431 238899999876
Q ss_pred CCceeecccCCCeeEEEeCCCCCeEEEEeCC
Q 014755 367 QEPAAILVQKDPIRAATWDPTCTRLVLCTGS 397 (419)
Q Consensus 367 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 397 (419)
.... ..+.+.|.|.|++.-+.+.+
T Consensus 397 ~~~f-------el~~~~W~p~~~~~ttsSs~ 420 (561)
T COG5354 397 AKVF-------ELTNITWDPSGQYVTTSSSC 420 (561)
T ss_pred chhh-------hhhhccccCCcccceeeccC
Confidence 5443 45566777777765555443
No 259
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.62 E-value=2.9e-13 Score=110.23 Aligned_cols=265 Identities=12% Similarity=0.103 Sum_probs=185.1
Q ss_pred ecCcceeEEEEecCCCe--EEEEeccCCeEEEEEccCCcceeee------ecCCccEeEEEECCCCCEEEEEecCCCeEE
Q 014755 45 SCLDKISYIEWALDSEY--ILCGLYKRLMIQAWSLTQPEWTCKI------DEGLAGIAYARWSPDSRHILTTSDFQLRLT 116 (419)
Q Consensus 45 ~~~~~v~~~~~s~~~~~--l~~~~~~~g~i~iw~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~ 116 (419)
.....|..++|.-+++. +...+.+ -.+..+..........+ .....+|..++.. |+ .|++|-.++ .+.
T Consensus 53 ~~~~ris~l~~~~d~~tevl~~r~~~-~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~-dg-~Litc~~sG-~l~ 128 (412)
T KOG3881|consen 53 DELDRISSLLFGVDGETEVLNARSAD-DDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLA-DG-TLITCVSSG-NLQ 128 (412)
T ss_pred chhhhhhhheeecCCceeEeeccccC-cccccccccCCccccccccccccccccccccchhhc-CC-EEEEEecCC-cEE
Confidence 34567888898876543 3333244 36777777665544332 3344566666553 34 466666655 899
Q ss_pred EEEcCCC-----eEEEeccCCCCeeeEEEccCCCEEEE-EeecCCCCeEEEEeccCCeEEEEEecc---------cccee
Q 014755 117 VWSLLNT-----ACVHVQSPKHASKGVAFTQDGKFAAI-CTRRDCKDYINLLSCHTWEIMGVFAVD---------TLDLA 181 (419)
Q Consensus 117 iwd~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~g~v~i~d~~~~~~~~~~~~~---------~~~v~ 181 (419)
+|..+.+ ....+.. ..++..+.-++...+|++ |+.. ....+.+||+.+.+.+-.-+.- .-+++
T Consensus 129 ~~~~k~~d~hss~l~~la~-g~g~~~~r~~~~~p~Iva~GGke-~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~t 206 (412)
T KOG3881|consen 129 VRHDKSGDLHSSKLIKLAT-GPGLYDVRQTDTDPYIVATGGKE-NINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWIT 206 (412)
T ss_pred EEeccCCccccccceeeec-CCceeeeccCCCCCceEecCchh-cccceeeeecccceeeeeccCCCCccccceeeeeec
Confidence 9999843 3333322 245566666676666665 5442 1257999999987554433221 13467
Q ss_pred eeeECCC--CCeEEEEcCCCCceEEEEcC--CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceee
Q 014755 182 DIEWSPD--DSAIVIWDSPLEYKVLIYSP--DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTF 257 (419)
Q Consensus 182 ~~~~~~~--~~~l~~~~~~~~~~i~~~d~--~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~ 257 (419)
.+.|-+. ...++. ++.-+.+++||. ..+++..+....+ +++++...|.+++|++|..-+.+..||++.++.+
T Consensus 207 di~Fl~g~~~~~fat--~T~~hqvR~YDt~~qRRPV~~fd~~E~--~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~ 282 (412)
T KOG3881|consen 207 DIRFLEGSPNYKFAT--ITRYHQVRLYDTRHQRRPVAQFDFLEN--PISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLL 282 (412)
T ss_pred cceecCCCCCceEEE--EecceeEEEecCcccCcceeEeccccC--cceeeeecCCCcEEEEecccchhheecccCceee
Confidence 8888887 666776 667799999999 5667777777666 8999999999999999999999999999988765
Q ss_pred eeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceE
Q 014755 258 AEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIG 337 (419)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 337 (419)
... +.+-.+.|+
T Consensus 283 g~~--------------------------------------------------------------------~kg~tGsir 294 (412)
T KOG3881|consen 283 GCG--------------------------------------------------------------------LKGITGSIR 294 (412)
T ss_pred ccc--------------------------------------------------------------------cCCccCCcc
Confidence 542 113456689
Q ss_pred EEEEccCCeEEEEecCCCCceEEEeeccCCCceeecccCCCeeEEEeCCCCC
Q 014755 338 LMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCT 389 (419)
Q Consensus 338 ~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~ 389 (419)
++..+|.++++|+++-| +.+||+|+++.+++...--...++++.+.++-+
T Consensus 295 sih~hp~~~~las~GLD--RyvRIhD~ktrkll~kvYvKs~lt~il~~~~~n 344 (412)
T KOG3881|consen 295 SIHCHPTHPVLASCGLD--RYVRIHDIKTRKLLHKVYVKSRLTFILLRDDVN 344 (412)
T ss_pred eEEEcCCCceEEeeccc--eeEEEeecccchhhhhhhhhccccEEEecCCcc
Confidence 99999999999999999 999999999977766555666777887765543
No 260
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.61 E-value=1.2e-13 Score=112.35 Aligned_cols=207 Identities=14% Similarity=0.113 Sum_probs=157.5
Q ss_pred CCCEEEEEeCCeEEEEecCCCc----EEEEeecCcceeEEEEecCCCeEEEEeccC--CeEEEEEccCCcceeeeecCC-
Q 014755 18 NARYIAVAVDYRLVVRDAHSFK----VVQLFSCLDKISYIEWALDSEYILCGLYKR--LMIQAWSLTQPEWTCKIDEGL- 90 (419)
Q Consensus 18 d~~~la~~~~~~i~i~~~~~~~----~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~--g~i~iw~~~~~~~~~~~~~~~- 90 (419)
||.++++.++|.+.+|..+.+. .+..+.....+..|.-+|...++++.+..+ ..+.|||++..+.+..-+.-.
T Consensus 115 dg~Litc~~sG~l~~~~~k~~d~hss~l~~la~g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpn 194 (412)
T KOG3881|consen 115 DGTLITCVSSGNLQVRHDKSGDLHSSKLIKLATGPGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPN 194 (412)
T ss_pred CCEEEEEecCCcEEEEeccCCccccccceeeecCCceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCC
Confidence 6666666679999999888432 222333346678888888777666533343 479999999886554433221
Q ss_pred --------ccEeEEEECCC--CCEEEEEecCCCeEEEEEcCCCeE-EE-eccCCCCeeeEEEccCCCEEEEEeecCCCCe
Q 014755 91 --------AGIAYARWSPD--SRHILTTSDFQLRLTVWSLLNTAC-VH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDY 158 (419)
Q Consensus 91 --------~~v~~~~~~~~--~~~l~~~~~~~~~i~iwd~~~~~~-~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~ 158 (419)
-.++++.|.+. ...++++...+ ++++||.+.++. +. +.....+++++...|+++.++++... +.
T Consensus 195 D~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~h-qvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~---g~ 270 (412)
T KOG3881|consen 195 DRLGLRVPVWITDIRFLEGSPNYKFATITRYH-QVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTK---GQ 270 (412)
T ss_pred ccccceeeeeeccceecCCCCCceEEEEecce-eEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEeccc---ch
Confidence 13678899887 78899999887 999999997543 33 77778889999999999999999875 89
Q ss_pred EEEEeccCCeEEEE-EeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccC
Q 014755 159 INLLSCHTWEIMGV-FAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPC 233 (419)
Q Consensus 159 v~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~ 233 (419)
+..+|+++++.... +.+..+.++++..+|..++++. ++-|+.++++|. +.+++....... ..+++.+.++
T Consensus 271 l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las--~GLDRyvRIhD~ktrkll~kvYvKs---~lt~il~~~~ 342 (412)
T KOG3881|consen 271 LAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLAS--CGLDRYVRIHDIKTRKLLHKVYVKS---RLTFILLRDD 342 (412)
T ss_pred hheecccCceeeccccCCccCCcceEEEcCCCceEEe--eccceeEEEeecccchhhhhhhhhc---cccEEEecCC
Confidence 99999999998877 8888899999999999999998 788999999999 556655544333 4677777654
No 261
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=99.61 E-value=9.2e-14 Score=126.64 Aligned_cols=269 Identities=15% Similarity=0.146 Sum_probs=180.6
Q ss_pred cceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCC-ccEeEEEECC------CCCEEEEEecCCCeEEEEEc
Q 014755 48 DKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGL-AGIAYARWSP------DSRHILTTSDFQLRLTVWSL 120 (419)
Q Consensus 48 ~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~-~~v~~~~~~~------~~~~l~~~~~~~~~i~iwd~ 120 (419)
+++.++.+-. ++|+++... .|.+||+..+..+..+.... .++. .+ .+.+++++..-+ .+..-+.
T Consensus 8 ~~l~~~~~~~--~~llag~gp--~i~~yd~~s~~li~~~~~~~~~~~H----~~e~~~~l~~~~~v~~~~~~-~v~~~~~ 78 (967)
T KOG0974|consen 8 GPLNLPQLVS--DYLLAGSGP--EILVYDLSSGCLIRHLIQSKILEVH----RGEGKVKLLSGKIVTCAKSD-EVYVKEA 78 (967)
T ss_pred ccccchhhcc--ceeeecCCC--ceEEeeCCchhHhhhhhhhcccccc----cccccceeccceEEEEEeec-ceeecch
Confidence 4455555543 688888754 69999999887654443211 1111 12 223344444332 2222222
Q ss_pred CCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccc----eeeeeECCCCCeEEEEc
Q 014755 121 LNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLD----LADIEWSPDDSAIVIWD 196 (419)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~~~~ 196 (419)
.... .......+....+..+...++.+..+ +.+.+||...+.........+.. ..-+.++++.-+++.
T Consensus 79 ~~~~---~~~~s~wi~g~~l~~e~k~i~l~~~~---ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~-- 150 (967)
T KOG0974|consen 79 SNQI---IERFSDWIFGAKLFEENKKIALVTSR---NSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIAS-- 150 (967)
T ss_pred hhhh---hhhccccccccchhhhcceEEEEEcC---ceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEe--
Confidence 1111 12222333445566667777777765 68999999887766655543321 222334444444554
Q ss_pred CCCCceEEEEcCC-CceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCcccee
Q 014755 197 SPLEYKVLIYSPD-GRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVF 275 (419)
Q Consensus 197 ~~~~~~i~~~d~~-~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (419)
++.-+.|.+|++. .+....+.+|.+ .+.++.++-||+++++.|+|.++|+|++.+.+.... ..|
T Consensus 151 gsv~~~iivW~~~~dn~p~~l~GHeG--~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~-------------~~f 215 (967)
T KOG0974|consen 151 GSVFGEIIVWKPHEDNKPIRLKGHEG--SIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGC-------------TGF 215 (967)
T ss_pred ccccccEEEEeccccCCcceecccCC--ceEEEEEccCCcEEEEEecCcceeeeecccccccCc-------------ccc
Confidence 7777999999992 222224666666 899999999999999999999999999998765431 111
Q ss_pred ccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCC
Q 014755 276 KEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSM 355 (419)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~ 355 (419)
+|...|..++|.|+ .+++++.|
T Consensus 216 -------------------------------------------------------gHsaRvw~~~~~~n--~i~t~ged- 237 (967)
T KOG0974|consen 216 -------------------------------------------------------GHSARVWACCFLPN--RIITVGED- 237 (967)
T ss_pred -------------------------------------------------------cccceeEEEEeccc--eeEEeccc-
Confidence 48888999999999 89999999
Q ss_pred CceEEEeeccCCCceeecccC-CCeeEEEeCCCCCeEEEEeCCCcEEEeecCC
Q 014755 356 PTTLWIWDICRQEPAAILVQK-DPIRAATWDPTCTRLVLCTGSSHLYMWTPSG 407 (419)
Q Consensus 356 ~~~i~iwd~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 407 (419)
.+.++|+.+..++....+|. ..|+.++..++...+++++.|+.+++|++.+
T Consensus 238 -ctcrvW~~~~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~ 289 (967)
T KOG0974|consen 238 -CTCRVWGVNGTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNG 289 (967)
T ss_pred -eEEEEEecccceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence 99999987765555444665 4699999999999999999999999999874
No 262
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=99.59 E-value=6.8e-11 Score=113.70 Aligned_cols=351 Identities=12% Similarity=0.140 Sum_probs=208.3
Q ss_pred eEEcCCCCEEEEEe-CCeEEEE----ecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEcc---------
Q 014755 13 SCFSPNARYIAVAV-DYRLVVR----DAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLT--------- 78 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~----~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~--------- 78 (419)
+.+-+|...|+.+. +|.|.+. +..+.+....-.-...|.+++||||+..|+....+ +++.+.+..
T Consensus 81 ~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~E~VG~vd~GI~a~~WSPD~Ella~vT~~-~~l~~mt~~fd~i~E~~l 159 (928)
T PF04762_consen 81 FQYLADSESLCIALASGDIILVREDPDPDEDEIEIVGSVDSGILAASWSPDEELLALVTGE-GNLLLMTRDFDPISEVPL 159 (928)
T ss_pred EEeccCCCcEEEEECCceEEEEEccCCCCCceeEEEEEEcCcEEEEEECCCcCEEEEEeCC-CEEEEEeccceEEEEeec
Confidence 55667777666665 7888888 65655554444467889999999999999998876 677665431
Q ss_pred ----CC----------cceeeeec------------------------CCccEeEEEECCCCCEEEEEec---C--CCeE
Q 014755 79 ----QP----------EWTCKIDE------------------------GLAGIAYARWSPDSRHILTTSD---F--QLRL 115 (419)
Q Consensus 79 ----~~----------~~~~~~~~------------------------~~~~v~~~~~~~~~~~l~~~~~---~--~~~i 115 (419)
-+ +...++.+ ....-..++|-.||+++++.+- . ...+
T Consensus 160 ~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~i 239 (928)
T PF04762_consen 160 DSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYFAVSSVEPETGSRRVI 239 (928)
T ss_pred CccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEEEEEEEEcCCCceeEE
Confidence 00 01111100 1223457889999999998863 1 2389
Q ss_pred EEEEcCCCeEEEeccCCCC-eeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEE----eccccceeeeeECCCCC
Q 014755 116 TVWSLLNTACVHVQSPKHA-SKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVF----AVDTLDLADIEWSPDDS 190 (419)
Q Consensus 116 ~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~----~~~~~~v~~~~~~~~~~ 190 (419)
++|+-+ |+.......... -.+++|.|.|++||+......+..|.+|.-+ |-.-..+ ......+..+.|++|+.
T Consensus 240 RVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfErN-GLrhgeF~l~~~~~~~~v~~l~Wn~ds~ 317 (928)
T PF04762_consen 240 RVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFERN-GLRHGEFTLRFDPEEEKVIELAWNSDSE 317 (928)
T ss_pred EEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEecC-CcEeeeEecCCCCCCceeeEEEECCCCC
Confidence 999987 554443222222 3789999999999998874444567777744 3332222 23456799999999999
Q ss_pred eEEEEcCCCCceEEEEcC-CCce--EEEEeecCCCCceeEEEEccCC-CeEEEEEecCcEEEEEcCCceeeeeecccccc
Q 014755 191 AIVIWDSPLEYKVLIYSP-DGRC--LLKYQAYESGLGVKSISWSPCG-QFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTV 266 (419)
Q Consensus 191 ~l~~~~~~~~~~i~~~d~-~~~~--~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~ 266 (419)
.|+++- ...|.+|-. +..- .+.+..... ..+..+.|+|.. ..|...+.+|.+..++..-......
T Consensus 318 iLAv~~---~~~vqLWt~~NYHWYLKqei~~~~~-~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s~------- 386 (928)
T PF04762_consen 318 ILAVWL---EDRVQLWTRSNYHWYLKQEIRFSSS-ESVNFVKWDPEKPLRLHVLTSNGQYEIYDFAWDVSRSP------- 386 (928)
T ss_pred EEEEEe---cCCceEEEeeCCEEEEEEEEEccCC-CCCCceEECCCCCCEEEEEecCCcEEEEEEEEEEEecC-------
Confidence 999853 334999988 4432 222222221 145569999964 4577777667776666431110000
Q ss_pred cCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCe
Q 014755 267 RGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQ 346 (419)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 346 (419)
...|++. . .....+|.......+.......|....... -...|.+++|++++.
T Consensus 387 -----------~~~~~D~--g-----------~vaVIDG~~lllTpf~~a~VPPPMs~~~l~---~~~~v~~vaf~~~~~ 439 (928)
T PF04762_consen 387 -----------GSSPNDN--G-----------TVAVIDGNKLLLTPFRRAVVPPPMSSYELE---LPSPVNDVAFSPSNS 439 (928)
T ss_pred -----------CCCccCc--e-----------EEEEEeCCeEEEecccccCCCchHhceEEc---CCCCcEEEEEeCCCC
Confidence 0000000 0 011112222222222222222221111111 235699999999998
Q ss_pred EEEEecCCCCceEEEeeccCCCce--------eec-----------ccCCCeeEEEeCCCCCeEEEEeCC---CcEEEee
Q 014755 347 YICTRNDSMPTTLWIWDICRQEPA--------AIL-----------VQKDPIRAATWDPTCTRLVLCTGS---SHLYMWT 404 (419)
Q Consensus 347 ~l~~~~~d~~~~i~iwd~~~~~~~--------~~~-----------~~~~~v~~~~~s~~~~~l~s~~~d---g~i~vw~ 404 (419)
.+|+-..| |.|.+|........ ..+ .....+..++|..+..+++....+ ..+.+++
T Consensus 440 ~~avl~~d--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 517 (928)
T PF04762_consen 440 RFAVLTSD--GSLSIYEWDLKNMWSVKPPKLLSSISLDSMDISDSELPLGSLRQLAWLNDDTLLVLSDSDSNQSKIVLVD 517 (928)
T ss_pred eEEEEECC--CCEEEEEecCCCcccccCcchhhhcccccccccccccccccEEEEEEeCCCEEEEEEecCcccceEEEEE
Confidence 88888888 99999986543211 000 023457888998887766665554 5777887
Q ss_pred cC
Q 014755 405 PS 406 (419)
Q Consensus 405 ~~ 406 (419)
+.
T Consensus 518 ~~ 519 (928)
T PF04762_consen 518 ID 519 (928)
T ss_pred ec
Confidence 74
No 263
>KOG1354 consensus Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.59 E-value=1.5e-13 Score=110.00 Aligned_cols=234 Identities=18% Similarity=0.254 Sum_probs=158.9
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCCCc-----EEEEee-c------------CcceeEEEEecCCC--eEEEEeccCCe
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHSFK-----VVQLFS-C------------LDKISYIEWALDSE--YILCGLYKRLM 71 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~~~-----~~~~~~-~------------~~~v~~~~~s~~~~--~l~~~~~~~g~ 71 (419)
|.|..+|.+||+|. +|+|.++.-+... ....+. | ...|..+.|.+++. .++..+.| .+
T Consensus 31 vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLlstNd-kt 109 (433)
T KOG1354|consen 31 VEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLSTND-KT 109 (433)
T ss_pred EEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEecCC-cc
Confidence 78999999999998 7889998543221 111221 3 35688999998764 34444445 69
Q ss_pred EEEEEccCCccee--------------------ee----------------ecCCccEeEEEECCCCCEEEEEecCCCeE
Q 014755 72 IQAWSLTQPEWTC--------------------KI----------------DEGLAGIAYARWSPDSRHILTTSDFQLRL 115 (419)
Q Consensus 72 i~iw~~~~~~~~~--------------------~~----------------~~~~~~v~~~~~~~~~~~l~~~~~~~~~i 115 (419)
|++|.+....... .+ ..|.-.|.++.++.|.+.++++.. = .|
T Consensus 110 iKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSADd-L-RI 187 (433)
T KOG1354|consen 110 IKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSADD-L-RI 187 (433)
T ss_pred eeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeeccc-e-ee
Confidence 9999986431110 00 125556889999999999888754 3 79
Q ss_pred EEEEcCCC-eE---EEeccCC-----CCeeeEEEccCC-CEEEEEeecCCCCeEEEEeccCCeEEE----EEec------
Q 014755 116 TVWSLLNT-AC---VHVQSPK-----HASKGVAFTQDG-KFAAICTRRDCKDYINLLSCHTWEIMG----VFAV------ 175 (419)
Q Consensus 116 ~iwd~~~~-~~---~~~~~~~-----~~~~~~~~~~~~-~~l~~~~~~~~~g~v~i~d~~~~~~~~----~~~~------ 175 (419)
.+|+++-- +. +-+..+. .-+++..|+|.. +.++..+. +|+|++-|++...+.. .+..
T Consensus 188 NLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSS---KGtIrLcDmR~~aLCd~hsKlfEepedp~~ 264 (433)
T KOG1354|consen 188 NLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSS---KGTIRLCDMRQSALCDAHSKLFEEPEDPSS 264 (433)
T ss_pred eeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecC---CCcEEEeechhhhhhcchhhhhccccCCcc
Confidence 99998742 11 1132222 235889999976 55555554 4899999998532211 1111
Q ss_pred ------cccceeeeeECCCCCeEEEEcCCCCceEEEEcC--CCceEEEEeecCCC-------------CceeEEEEccCC
Q 014755 176 ------DTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP--DGRCLLKYQAYESG-------------LGVKSISWSPCG 234 (419)
Q Consensus 176 ------~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~--~~~~~~~~~~~~~~-------------~~v~~~~~s~~~ 234 (419)
--..|..+.|+++|++++.-+ --+|++||+ +.+++.+++.|... ..-..++|+-++
T Consensus 265 rsffseiIsSISDvKFs~sGryilsRD---yltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~ 341 (433)
T KOG1354|consen 265 RSFFSEIISSISDVKFSHSGRYILSRD---YLTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGND 341 (433)
T ss_pred hhhHHHHhhhhhceEEccCCcEEEEec---cceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCc
Confidence 113578899999999998732 478999999 77788887766421 123468899999
Q ss_pred CeEEEEEecCcEEEEEcCCce
Q 014755 235 QFLAVGSYDQTLRVLNHLTWK 255 (419)
Q Consensus 235 ~~l~~~~~d~~i~v~d~~~~~ 255 (419)
.++++|+.....++|++..|.
T Consensus 342 ~~v~TGsy~n~frvf~~~~gs 362 (433)
T KOG1354|consen 342 SYVMTGSYNNVFRVFNLARGS 362 (433)
T ss_pred ceEecccccceEEEecCCCCc
Confidence 999999999999999976654
No 264
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.58 E-value=5.8e-14 Score=119.25 Aligned_cols=165 Identities=18% Similarity=0.270 Sum_probs=127.0
Q ss_pred eeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE--eccCCCCeeeEEEccC--CCEEEEEeecCCCCe
Q 014755 83 TCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH--VQSPKHASKGVAFTQD--GKFAAICTRRDCKDY 158 (419)
Q Consensus 83 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~g~ 158 (419)
...+.+|.+.|.++.|+.+|.+|++|++|. .+.|||.-..+.+. -.+|...|.++.|-|. .+.+++|..| ..
T Consensus 43 E~eL~GH~GCVN~LeWn~dG~lL~SGSDD~-r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgD---k~ 118 (758)
T KOG1310|consen 43 EAELTGHTGCVNCLEWNADGELLASGSDDT-RLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGD---KL 118 (758)
T ss_pred hhhhccccceecceeecCCCCEEeecCCcc-eEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCc---ce
Confidence 456889999999999999999999999988 99999998877766 5788889999999885 3667777766 79
Q ss_pred EEEEeccC----------CeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCC--ceEEEE-------eec
Q 014755 159 INLLSCHT----------WEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDG--RCLLKY-------QAY 219 (419)
Q Consensus 159 v~i~d~~~----------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~--~~~~~~-------~~~ 219 (419)
|+++|+.. .+....+..|...|..++-.|++...+ |+++.||.|+-+|+.. .+.... ..+
T Consensus 119 i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~Phtf-wsasEDGtirQyDiREph~c~p~~~~~~~l~ny~ 197 (758)
T KOG1310|consen 119 IKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTF-WSASEDGTIRQYDIREPHVCNPDEDCPSILVNYN 197 (758)
T ss_pred EEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceE-EEecCCcceeeecccCCccCCccccccHHHHHhc
Confidence 99999984 234455667888899999999985543 4478899999999822 111111 111
Q ss_pred CCCCceeEEEEccCC-CeEEEEEecCcEEEEEcC
Q 014755 220 ESGLGVKSISWSPCG-QFLAVGSYDQTLRVLNHL 252 (419)
Q Consensus 220 ~~~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~ 252 (419)
...-...++.++|.. .+|++|+.|-..++||.+
T Consensus 198 ~~lielk~ltisp~rp~~laVGgsdpfarLYD~R 231 (758)
T KOG1310|consen 198 PQLIELKCLTISPSRPYYLAVGGSDPFARLYDRR 231 (758)
T ss_pred hhhheeeeeeecCCCCceEEecCCCchhhhhhhh
Confidence 111256789999965 588999999999999963
No 265
>KOG1912 consensus WD40 repeat protein [General function prediction only]
Probab=99.57 E-value=7.8e-12 Score=110.90 Aligned_cols=231 Identities=14% Similarity=0.147 Sum_probs=160.5
Q ss_pred eEEcCCCCEEEEEeCCeEEEEecCCCcEEEEee-cCcceeEEEEecC-----------CC-eEEEEeccCCeEEEEEccC
Q 014755 13 SCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFS-CLDKISYIEWALD-----------SE-YILCGLYKRLMIQAWSLTQ 79 (419)
Q Consensus 13 ~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~-----------~~-~l~~~~~~~g~i~iw~~~~ 79 (419)
+.|+|.| +||+|+..-|.+.|..+.+.++.+. |...|+.+.|.|- .. .||++.. .|.|.+||...
T Consensus 21 ~Dw~~~G-LiAygshslV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~-~GrIil~d~~~ 98 (1062)
T KOG1912|consen 21 ADWSPSG-LIAYGSHSLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADI-SGRIILVDFVL 98 (1062)
T ss_pred cccCccc-eEEEecCceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccc-cCcEEEEEehh
Confidence 7799877 8999999999999999999888776 7889999999883 12 3344433 58999999999
Q ss_pred CcceeeeecCCccEeEEEECC---CCCE-EEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCC-CEEEEEeec
Q 014755 80 PEWTCKIDEGLAGIAYARWSP---DSRH-ILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDG-KFAAICTRR 153 (419)
Q Consensus 80 ~~~~~~~~~~~~~v~~~~~~~---~~~~-l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~-~~l~~~~~~ 153 (419)
+..+..+..+..++..++|-+ +.+. |++..... .+.+|+..+|+... .........++.+.|-. +.+.+.+..
T Consensus 99 ~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss-~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~ 177 (1062)
T KOG1912|consen 99 ASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSS-TLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSK 177 (1062)
T ss_pred hhhhhhhcCCCcchhheeeeeccCcchheeEEecCCc-EEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEEEccC
Confidence 988888888999999999976 4433 44444444 99999999998776 44444445778888854 555554442
Q ss_pred CCCCeEEEEeccC-------CeEEEEEecccc-------------------------ceeeeeECCCCCeEEEEcCCCCc
Q 014755 154 DCKDYINLLSCHT-------WEIMGVFAVDTL-------------------------DLADIEWSPDDSAIVIWDSPLEY 201 (419)
Q Consensus 154 ~~~g~v~i~d~~~-------~~~~~~~~~~~~-------------------------~v~~~~~~~~~~~l~~~~~~~~~ 201 (419)
|.+.+-+.-. ++..+.-..|.. ....++|+|.-+.+++ .....
T Consensus 178 ---g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lf--i~~pr 252 (1062)
T KOG1912|consen 178 ---GFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILF--ITFPR 252 (1062)
T ss_pred ---ceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEE--EEecc
Confidence 6666655421 333332222211 0123567787666555 34477
Q ss_pred eEEEEcC-CCceEEEEeecCCCCceeEEEEccCC--CeEEEEEecCcEEEEEcCC
Q 014755 202 KVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCG--QFLAVGSYDQTLRVLNHLT 253 (419)
Q Consensus 202 ~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~~~~~d~~i~v~d~~~ 253 (419)
.+.++|+ -..++........ .+.-+.+-|++ ..|++.-.||.+.+|--+.
T Consensus 253 ellv~dle~~~~l~vvpier~--~akfv~vlP~~~rd~LfclH~nG~ltirvrk~ 305 (1062)
T KOG1912|consen 253 ELLVFDLEYECCLAVVPIERG--GAKFVDVLPDPRRDALFCLHSNGRLTIRVRKE 305 (1062)
T ss_pred ceEEEcchhhceeEEEEeccC--CcceeEeccCCCcceEEEEecCCeEEEEEeec
Confidence 8999999 4555666555444 45567777765 4788888999999987544
No 266
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.57 E-value=2.6e-11 Score=118.79 Aligned_cols=243 Identities=10% Similarity=0.071 Sum_probs=160.3
Q ss_pred ccccCeEEcCCCCEEEEE-e-CCeEEEEecCCCcEEEEeecC---------------cceeEEEEecCCCeEEEEeccCC
Q 014755 8 KQTGPSCFSPNARYIAVA-V-DYRLVVRDAHSFKVVQLFSCL---------------DKISYIEWALDSEYILCGLYKRL 70 (419)
Q Consensus 8 ~~~~~~~~s~d~~~la~~-~-~~~i~i~~~~~~~~~~~~~~~---------------~~v~~~~~s~~~~~l~~~~~~~g 70 (419)
...+.+++++++..|+++ + .++|+++|..+. .+..++.. .....+++.++++.|+++...++
T Consensus 568 ~~P~gvavd~~~g~lyVaDs~n~rI~v~d~~G~-~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~ 646 (1057)
T PLN02919 568 KFPGKLAIDLLNNRLFISDSNHNRIVVTDLDGN-FIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENH 646 (1057)
T ss_pred CCCceEEEECCCCeEEEEECCCCeEEEEeCCCC-EEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCc
Confidence 444558999865545544 3 677999998654 34333321 23578999999887777665556
Q ss_pred eEEEEEccCCcceeeeecC-----------------CccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccC--
Q 014755 71 MIQAWSLTQPEWTCKIDEG-----------------LAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSP-- 131 (419)
Q Consensus 71 ~i~iw~~~~~~~~~~~~~~-----------------~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~-- 131 (419)
.|+++|+.++.. .++.+. -.....++++|++..++++...++.|++||..++....+.+.
T Consensus 647 ~Ir~id~~~~~V-~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~ 725 (1057)
T PLN02919 647 ALREIDFVNETV-RTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGY 725 (1057)
T ss_pred eEEEEecCCCEE-EEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCc
Confidence 899999877643 233110 123467999996555655544444999999988765432211
Q ss_pred -------------CCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEec-------------c--------c
Q 014755 132 -------------KHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAV-------------D--------T 177 (419)
Q Consensus 132 -------------~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~-------------~--------~ 177 (419)
-.....++++|+++.|+++... ++.|++||++++.......+ . -
T Consensus 726 ~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~--n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l 803 (1057)
T PLN02919 726 ERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSE--SSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLL 803 (1057)
T ss_pred cccCCCCccccccccCccEEEEeCCCCEEEEEECC--CCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhc
Confidence 1123679999999877776654 37999999987653211100 0 0
Q ss_pred cceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecC------------CCCceeEEEEccCCCeEEEEEecCc
Q 014755 178 LDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYE------------SGLGVKSISWSPCGQFLAVGSYDQT 245 (419)
Q Consensus 178 ~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~------------~~~~v~~~~~s~~~~~l~~~~~d~~ 245 (419)
.....++++++|..++. + ..++.|++||..+..+..+.+.. .......++++++|+.+++-+.++.
T Consensus 804 ~~P~Gvavd~dG~LYVA-D-s~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~ 881 (1057)
T PLN02919 804 QHPLGVLCAKDGQIYVA-D-SYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSL 881 (1057)
T ss_pred cCCceeeEeCCCcEEEE-E-CCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCE
Confidence 12468889999985444 3 55899999999544444443221 1125778999999998888888999
Q ss_pred EEEEEcCCcee
Q 014755 246 LRVLNHLTWKT 256 (419)
Q Consensus 246 i~v~d~~~~~~ 256 (419)
|++||+.+++.
T Consensus 882 Irvid~~~~~~ 892 (1057)
T PLN02919 882 IRYLDLNKGEA 892 (1057)
T ss_pred EEEEECCCCcc
Confidence 99999998765
No 267
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.54 E-value=3.6e-11 Score=117.76 Aligned_cols=263 Identities=11% Similarity=-0.017 Sum_probs=163.7
Q ss_pred eEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEecc--C------------CCCeeeEEEccCCCEEEEEeecCCCCeE
Q 014755 94 AYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQS--P------------KHASKGVAFTQDGKFAAICTRRDCKDYI 159 (419)
Q Consensus 94 ~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~--~------------~~~~~~~~~~~~~~~l~~~~~~~~~g~v 159 (419)
..+++++++..++.+....+.|.++|..+.....+.. . -.....++++++++.|+++... .+.|
T Consensus 571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~--n~~I 648 (1057)
T PLN02919 571 GKLAIDLLNNRLFISDSNHNRIVVTDLDGNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTE--NHAL 648 (1057)
T ss_pred ceEEEECCCCeEEEEECCCCeEEEEeCCCCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCC--CceE
Confidence 4678887655566665545599999987654433322 1 0124789999998877776543 3689
Q ss_pred EEEeccCCeEEEEEecc-----------------ccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecC--
Q 014755 160 NLLSCHTWEIMGVFAVD-----------------TLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYE-- 220 (419)
Q Consensus 160 ~i~d~~~~~~~~~~~~~-----------------~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~-- 220 (419)
+.+|+.++.. ..+.+. -.....++++|++..+++.+ ..++.|++||.....+..+.+..
T Consensus 649 r~id~~~~~V-~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad-~~~~~I~v~d~~~g~v~~~~G~G~~ 726 (1057)
T PLN02919 649 REIDFVNETV-RTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAM-AGQHQIWEYNISDGVTRVFSGDGYE 726 (1057)
T ss_pred EEEecCCCEE-EEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEE-CCCCeEEEEECCCCeEEEEecCCcc
Confidence 9999877543 222110 12346789999666666654 45788999998433333332211
Q ss_pred -----------CCCceeEEEEccCCCeEE-EEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCccccccee
Q 014755 221 -----------SGLGVKSISWSPCGQFLA-VGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSE 288 (419)
Q Consensus 221 -----------~~~~v~~~~~s~~~~~l~-~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (419)
.......++++|+++.|+ +-+.++.|++||+.++...... ...... +.....|.. .++
T Consensus 727 ~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~-gg~~~~-~~~l~~fG~---~dG----- 796 (1057)
T PLN02919 727 RNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLA-GGDPTF-SDNLFKFGD---HDG----- 796 (1057)
T ss_pred ccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEE-eccccc-CcccccccC---CCC-----
Confidence 012466799999998554 4456789999998876532111 000000 000000000 000
Q ss_pred eeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCC
Q 014755 289 LCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQE 368 (419)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~ 368 (419)
.. ..........++++++|.++++-..+ +.|++||..++.
T Consensus 797 -----------------~g---------------------~~~~l~~P~Gvavd~dG~LYVADs~N--~rIrviD~~tg~ 836 (1057)
T PLN02919 797 -----------------VG---------------------SEVLLQHPLGVLCAKDGQIYVADSYN--HKIKKLDPATKR 836 (1057)
T ss_pred -----------------ch---------------------hhhhccCCceeeEeCCCcEEEEECCC--CEEEEEECCCCe
Confidence 00 00001113578999999988888777 999999998887
Q ss_pred ceeeccc--------------CCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeE
Q 014755 369 PAAILVQ--------------KDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYC 410 (419)
Q Consensus 369 ~~~~~~~--------------~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~ 410 (419)
+....+. -.....++++++|+++++-+.+++|++||+.+++.
T Consensus 837 v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 837 VTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred EEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence 6655431 12577899999999888888999999999998764
No 268
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=99.53 E-value=4.4e-11 Score=105.97 Aligned_cols=290 Identities=14% Similarity=0.041 Sum_probs=175.7
Q ss_pred CCEEEEEe-CCeEEEEecCCCcEEEEeecCccee-EEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeE-
Q 014755 19 ARYIAVAV-DYRLVVRDAHSFKVVQLFSCLDKIS-YIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAY- 95 (419)
Q Consensus 19 ~~~la~~~-~~~i~i~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~- 95 (419)
+..+++++ ++.|..+|..+|+.+-...-...+. .+. .++..+++++.+ |.+..+|.++|+.+.+..... .+.+
T Consensus 65 ~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~--v~~~~v~v~~~~-g~l~ald~~tG~~~W~~~~~~-~~~~~ 140 (377)
T TIGR03300 65 GGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVG--ADGGLVFVGTEK-GEVIALDAEDGKELWRAKLSS-EVLSP 140 (377)
T ss_pred CCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceE--EcCCEEEEEcCC-CEEEEEECCCCcEeeeeccCc-eeecC
Confidence 45566665 7889999999999876655333322 222 246677777766 899999999998776554322 2221
Q ss_pred EEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCe-----eeEEEccCCCEEEEEeecCCCCeEEEEeccCCeE
Q 014755 96 ARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHAS-----KGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEI 169 (419)
Q Consensus 96 ~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~ 169 (419)
... .+..++.+..++ .+..+|.++|+.+. ........ ...... + ..++++..+ +.+..+|+++++.
T Consensus 141 p~v--~~~~v~v~~~~g-~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~-~-~~v~~~~~~---g~v~ald~~tG~~ 212 (377)
T TIGR03300 141 PLV--ANGLVVVRTNDG-RLTALDAATGERLWTYSRVTPALTLRGSASPVIA-D-GGVLVGFAG---GKLVALDLQTGQP 212 (377)
T ss_pred CEE--ECCEEEEECCCC-eEEEEEcCCCceeeEEccCCCceeecCCCCCEEE-C-CEEEEECCC---CEEEEEEccCCCE
Confidence 111 344566666666 89999999988765 22221111 111221 2 356666554 7899999999876
Q ss_pred EEEEecccc----ce---eeeeECC--CCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEE
Q 014755 170 MGVFAVDTL----DL---ADIEWSP--DDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAV 239 (419)
Q Consensus 170 ~~~~~~~~~----~v---~~~~~~~--~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 239 (419)
+-....... .+ ..+.-+| .+..+++ ...++.++.+|. +|+.+...... ....+.. .+..++.
T Consensus 213 ~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~--~~~~g~l~a~d~~tG~~~W~~~~~----~~~~p~~--~~~~vyv 284 (377)
T TIGR03300 213 LWEQRVALPKGRTELERLVDVDGDPVVDGGQVYA--VSYQGRVAALDLRSGRVLWKRDAS----SYQGPAV--DDNRLYV 284 (377)
T ss_pred eeeeccccCCCCCchhhhhccCCccEEECCEEEE--EEcCCEEEEEECCCCcEEEeeccC----CccCceE--eCCEEEE
Confidence 644321100 00 0010011 2345555 345789999999 88776655421 1222222 4567888
Q ss_pred EEecCcEEEEEcCCceeeeeecc-cccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCC
Q 014755 240 GSYDQTLRVLNHLTWKTFAEFMH-LSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPI 318 (419)
Q Consensus 240 ~~~d~~i~v~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (419)
++.+|.+..+|..+++.+..... ...
T Consensus 285 ~~~~G~l~~~d~~tG~~~W~~~~~~~~----------------------------------------------------- 311 (377)
T TIGR03300 285 TDADGVVVALDRRSGSELWKNDELKYR----------------------------------------------------- 311 (377)
T ss_pred ECCCCeEEEEECCCCcEEEccccccCC-----------------------------------------------------
Confidence 88899999999998876654320 000
Q ss_pred CCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc-cCCCe-eEEEeCCCCCeEEEEeC
Q 014755 319 SLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV-QKDPI-RAATWDPTCTRLVLCTG 396 (419)
Q Consensus 319 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~-~~~~v-~~~~~s~~~~~l~s~~~ 396 (419)
....... .+..+++++.+ |.|+++|..+++++.... +...+ .+..+. ++ .|+.++.
T Consensus 312 ----------------~~ssp~i--~g~~l~~~~~~--G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~-~~-~l~v~~~ 369 (377)
T TIGR03300 312 ----------------QLTAPAV--VGGYLVVGDFE--GYLHWLSREDGSFVARLKTDGSGIASPPVVV-GD-GLLVQTR 369 (377)
T ss_pred ----------------ccccCEE--ECCEEEEEeCC--CEEEEEECCCCCEEEEEEcCCCccccCCEEE-CC-EEEEEeC
Confidence 0111112 35577888888 999999999999887765 44333 333443 33 4778899
Q ss_pred CCcEEEe
Q 014755 397 SSHLYMW 403 (419)
Q Consensus 397 dg~i~vw 403 (419)
||.|..+
T Consensus 370 dG~l~~~ 376 (377)
T TIGR03300 370 DGDLYAF 376 (377)
T ss_pred CceEEEe
Confidence 9998765
No 269
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=99.53 E-value=4.6e-10 Score=108.09 Aligned_cols=313 Identities=16% Similarity=0.158 Sum_probs=192.6
Q ss_pred CcceeEEEEecCCCeEEEEeccCCeEEEE----EccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcC-
Q 014755 47 LDKISYIEWALDSEYILCGLYKRLMIQAW----SLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLL- 121 (419)
Q Consensus 47 ~~~v~~~~~s~~~~~l~~~~~~~g~i~iw----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~- 121 (419)
.+.|.++.+-++...++.+..+ |.|.+. +..+.. +.....-...|.+++||||++.|+.+..++ ++.+.+..
T Consensus 75 ~~~ivs~~yl~d~~~l~~~~~~-Gdi~~~~~~~~~~~~~-~E~VG~vd~GI~a~~WSPD~Ella~vT~~~-~l~~mt~~f 151 (928)
T PF04762_consen 75 NDKIVSFQYLADSESLCIALAS-GDIILVREDPDPDEDE-IEIVGSVDSGILAASWSPDEELLALVTGEG-NLLLMTRDF 151 (928)
T ss_pred CCcEEEEEeccCCCcEEEEECC-ceEEEEEccCCCCCce-eEEEEEEcCcEEEEEECCCcCEEEEEeCCC-EEEEEeccc
Confidence 4679999999999888888766 889988 544433 223344567899999999999999988776 66554311
Q ss_pred ---------C---C--eEE---------Eec------------c------------CCCCeeeEEEccCCCEEEEEeecC
Q 014755 122 ---------N---T--ACV---------HVQ------------S------------PKHASKGVAFTQDGKFAAICTRRD 154 (419)
Q Consensus 122 ---------~---~--~~~---------~~~------------~------------~~~~~~~~~~~~~~~~l~~~~~~~ 154 (419)
. | +.+ ++. . ....-..++|..||+++|+.+-+.
T Consensus 152 d~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~ 231 (928)
T PF04762_consen 152 DPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYFAVSSVEP 231 (928)
T ss_pred eEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEEEEEEEEc
Confidence 0 0 000 000 0 112336789999999999988632
Q ss_pred --C-CCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCC-CceEEEEcCCCceEEEEeec--CCCCceeEE
Q 014755 155 --C-KDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPL-EYKVLIYSPDGRCLLKYQAY--ESGLGVKSI 228 (419)
Q Consensus 155 --~-~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~~~i~~~d~~~~~~~~~~~~--~~~~~v~~~ 228 (419)
+ ...+++|+-+ |++...-..-.+--.+++|.|.|++|+...... ...|.+|..+|-.-..+... .....|..+
T Consensus 232 ~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfErNGLrhgeF~l~~~~~~~~v~~l 310 (928)
T PF04762_consen 232 ETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFERNGLRHGEFTLRFDPEEEKVIEL 310 (928)
T ss_pred CCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEecCCcEeeeEecCCCCCCceeeEE
Confidence 2 3589999965 666555544445556899999999999855422 36788888887666655543 233479999
Q ss_pred EEccCCCeEEEEEecCcEEEEEcCCce--eeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCc
Q 014755 229 SWSPCGQFLAVGSYDQTLRVLNHLTWK--TFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGH 306 (419)
Q Consensus 229 ~~s~~~~~l~~~~~d~~i~v~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (419)
.|++|+..||..-.| .|.+|-..+.. ..+.+..+... ....+.|.+... ..+..+ ..+.
T Consensus 311 ~Wn~ds~iLAv~~~~-~vqLWt~~NYHWYLKqei~~~~~~--~~~~~~Wdpe~p-----~~L~v~-----------t~~g 371 (928)
T PF04762_consen 311 AWNSDSEILAVWLED-RVQLWTRSNYHWYLKQEIRFSSSE--SVNFVKWDPEKP-----LRLHVL-----------TSNG 371 (928)
T ss_pred EECCCCCEEEEEecC-CceEEEeeCCEEEEEEEEEccCCC--CCCceEECCCCC-----CEEEEE-----------ecCC
Confidence 999999999997765 49999987654 22222211110 001133432110 001111 1100
Q ss_pred eEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEcc-----CCeEEEEecCCCCceEEEeeccCCCce-----eecccC
Q 014755 307 IKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSS-----DSQYICTRNDSMPTTLWIWDICRQEPA-----AILVQK 376 (419)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-----~g~~l~~~~~d~~~~i~iwd~~~~~~~-----~~~~~~ 376 (419)
....+.. ...++.++ |...+++... ..+.+-.++..-.- ..+.-.
T Consensus 372 ~~~~~~~----------------------~~~v~~s~~~~~~D~g~vaVIDG---~~lllTpf~~a~VPPPMs~~~l~~~ 426 (928)
T PF04762_consen 372 QYEIYDF----------------------AWDVSRSPGSSPNDNGTVAVIDG---NKLLLTPFRRAVVPPPMSSYELELP 426 (928)
T ss_pred cEEEEEE----------------------EEEEEecCCCCccCceEEEEEeC---CeEEEecccccCCCchHhceEEcCC
Confidence 0001110 12222222 2223333333 45666666554322 222456
Q ss_pred CCeeEEEeCCCCCeEEEEeCCCcEEEeecCC
Q 014755 377 DPIRAATWDPTCTRLVLCTGSSHLYMWTPSG 407 (419)
Q Consensus 377 ~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 407 (419)
.+|.+++|++++..+++-..||.|.+|....
T Consensus 427 ~~v~~vaf~~~~~~~avl~~d~~l~~~~~~~ 457 (928)
T PF04762_consen 427 SPVNDVAFSPSNSRFAVLTSDGSLSIYEWDL 457 (928)
T ss_pred CCcEEEEEeCCCCeEEEEECCCCEEEEEecC
Confidence 8899999999998899999999999999654
No 270
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=99.51 E-value=1.3e-11 Score=99.19 Aligned_cols=231 Identities=14% Similarity=0.166 Sum_probs=157.0
Q ss_pred EEcCCCCEEEEEe-CCeEEEE-ecCCCcEEEEee--cCcceeEEEEecCCCeEEEEeccCCeEEEEEccC----Ccceee
Q 014755 14 CFSPNARYIAVAV-DYRLVVR-DAHSFKVVQLFS--CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQ----PEWTCK 85 (419)
Q Consensus 14 ~~s~d~~~la~~~-~~~i~i~-~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~----~~~~~~ 85 (419)
..-|-..-+.+++ |.+++|| +.+.++.-..+. ...+++++++.++.+.|+++-.. |++.-+.+.. ...++.
T Consensus 31 ~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~n-gtvtefs~sedfnkm~~~r~ 109 (404)
T KOG1409|consen 31 ILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDN-GTVTEFALSEDFNKMTFLKD 109 (404)
T ss_pred eeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEec-ceEEEEEhhhhhhhcchhhh
Confidence 3445455566776 7789999 455666555444 35789999999999999988754 8998887643 345566
Q ss_pred eecCCccEeEEEECCCCCEEEEEecCCCeEEEEE-cCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEec
Q 014755 86 IDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWS-LLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSC 164 (419)
Q Consensus 86 ~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~ 164 (419)
...|...+..+.|+...+.+++.+.|. .+ .|. .+.+..+.-........++.+.-. +...|.. .|.|....+
T Consensus 110 ~~~h~~~v~~~if~~~~e~V~s~~~dk-~~-~~hc~e~~~~lg~Y~~~~~~t~~~~d~~--~~fvGd~---~gqvt~lr~ 182 (404)
T KOG1409|consen 110 YLAHQARVSAIVFSLTHEWVLSTGKDK-QF-AWHCTESGNRLGGYNFETPASALQFDAL--YAFVGDH---SGQITMLKL 182 (404)
T ss_pred hhhhhcceeeEEecCCceeEEEecccc-ce-EEEeeccCCcccceEeeccCCCCceeeE--EEEeccc---ccceEEEEE
Confidence 678999999999999999999999887 44 443 333332220000011111111111 2222222 245544433
Q ss_pred --cCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEe
Q 014755 165 --HTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSY 242 (419)
Q Consensus 165 --~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 242 (419)
..-.++..+.+|...+.++.|.|..+.++. +..+..+.+||+-+..-.......+...|..+..-+--+.+.+++.
T Consensus 183 ~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfS--g~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~e 260 (404)
T KOG1409|consen 183 EQNGCQLITTFNGHTGEVTCLKWDPGQRLLFS--GASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGE 260 (404)
T ss_pred eecCCceEEEEcCcccceEEEEEcCCCcEEEe--ccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccC
Confidence 446678889999999999999999998888 8889999999995443333333333337888888888889999999
Q ss_pred cCcEEEEEcCCc
Q 014755 243 DQTLRVLNHLTW 254 (419)
Q Consensus 243 d~~i~v~d~~~~ 254 (419)
||.|.+|+.+..
T Consensus 261 dg~i~~w~mn~~ 272 (404)
T KOG1409|consen 261 DGGIVVWNMNVK 272 (404)
T ss_pred CCeEEEEeccce
Confidence 999999998653
No 271
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=99.51 E-value=1.6e-10 Score=94.13 Aligned_cols=245 Identities=11% Similarity=0.093 Sum_probs=165.4
Q ss_pred cEeEEEECC-CCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCe--eeEEEccCCCEEEEEeec--CCCCeEEEEecc
Q 014755 92 GIAYARWSP-DSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHAS--KGVAFTQDGKFAAICTRR--DCKDYINLLSCH 165 (419)
Q Consensus 92 ~v~~~~~~~-~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~--~~~~~~~~~~~l~~~~~~--~~~g~v~i~d~~ 165 (419)
....++.+| ....++++-..+-...+||..+++... +......- -.-.|++||++|++...+ .+.|.|-|||..
T Consensus 6 RgH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~ 85 (305)
T PF07433_consen 6 RGHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAA 85 (305)
T ss_pred cccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECc
Confidence 456788899 556667776767689999999998887 44444333 467899999999987654 345799999998
Q ss_pred -CCeEEEEEeccccceeeeeECCCCCeEEEEcCCC----------------CceEEEEcC-CCceEEEEee--cCCCCce
Q 014755 166 -TWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPL----------------EYKVLIYSP-DGRCLLKYQA--YESGLGV 225 (419)
Q Consensus 166 -~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~----------------~~~i~~~d~-~~~~~~~~~~--~~~~~~v 225 (419)
+.+.+.++..+.-....+.+.|||+.|++.++.. +..+.+.|. +|+.+.+... ..+...+
T Consensus 86 ~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSi 165 (305)
T PF07433_consen 86 RGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSI 165 (305)
T ss_pred CCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccce
Confidence 6778888888877788899999999999866542 235666766 8888877554 3344579
Q ss_pred eEEEEccCCCeEEEEEecCc-------EEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccc
Q 014755 226 KSISWSPCGQFLAVGSYDQT-------LRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQG 298 (419)
Q Consensus 226 ~~~~~s~~~~~l~~~~~d~~-------i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (419)
..+++.++|..++..-..|. |-+++ .++.+..+..+...
T Consensus 166 RHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~--~g~~~~~~~~p~~~-------------------------------- 211 (305)
T PF07433_consen 166 RHLAVDGDGTVAFAMQYQGDPGDAPPLVALHR--RGGALRLLPAPEEQ-------------------------------- 211 (305)
T ss_pred eeEEecCCCcEEEEEecCCCCCccCCeEEEEc--CCCcceeccCChHH--------------------------------
Confidence 99999999876655544332 11221 11111111100000
Q ss_pred cccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecccCCC
Q 014755 299 NSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILVQKDP 378 (419)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~~~~~ 378 (419)
...-.+.+-+++++++|.++++.+-. .+.+.+||..+++++.... -..
T Consensus 212 ------------------------------~~~l~~Y~gSIa~~~~g~~ia~tsPr-Gg~~~~~d~~tg~~~~~~~-l~D 259 (305)
T PF07433_consen 212 ------------------------------WRRLNGYIGSIAADRDGRLIAVTSPR-GGRVAVWDAATGRLLGSVP-LPD 259 (305)
T ss_pred ------------------------------HHhhCCceEEEEEeCCCCEEEEECCC-CCEEEEEECCCCCEeeccc-cCc
Confidence 01133558899999999888776652 3899999999999887653 334
Q ss_pred eeEEEeCCCCCeEEEEeCCCcEEEee
Q 014755 379 IRAATWDPTCTRLVLCTGSSHLYMWT 404 (419)
Q Consensus 379 v~~~~~s~~~~~l~s~~~dg~i~vw~ 404 (419)
+..++-.+++ +++|.+. |.+...+
T Consensus 260 ~cGva~~~~~-f~~ssG~-G~~~~~~ 283 (305)
T PF07433_consen 260 ACGVAPTDDG-FLVSSGQ-GQLIRLS 283 (305)
T ss_pred eeeeeecCCc-eEEeCCC-ccEEEcc
Confidence 5667777666 6665543 5444333
No 272
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.50 E-value=2.3e-11 Score=104.78 Aligned_cols=185 Identities=15% Similarity=0.200 Sum_probs=145.8
Q ss_pred cCCCCEEEEEe-CCeEEEEecCCCcEEEEee----cCcceeEEEE------ec--------------CCCeEEEEeccCC
Q 014755 16 SPNARYIAVAV-DYRLVVRDAHSFKVVQLFS----CLDKISYIEW------AL--------------DSEYILCGLYKRL 70 (419)
Q Consensus 16 s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~----~~~~v~~~~~------s~--------------~~~~l~~~~~~~g 70 (419)
.|-..|+|... +|.++||+...+++.+.+. -.+...+..| +| |...++-|.. .|
T Consensus 2 ~~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~-~g 80 (541)
T KOG4547|consen 2 PPALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTP-QG 80 (541)
T ss_pred CchhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecC-Cc
Confidence 34567888886 8999999999998877654 2333444444 22 2234555554 48
Q ss_pred eEEEEEccCCcceeeee--cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEE
Q 014755 71 MIQAWSLTQPEWTCKID--EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFA 147 (419)
Q Consensus 71 ~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l 147 (419)
.|.+|++..++....+. .|.+.|.++.++.+-..|.+++.+. .+..|+...+...+ ....+..+.+++.+||+..+
T Consensus 81 ~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~-~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l 159 (541)
T KOG4547|consen 81 SVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADL-KVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKIL 159 (541)
T ss_pred cEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCce-eEEEEecccceeeeeeccCCCccceEEEcCCCCEE
Confidence 99999999998877765 5778999999999999999999988 99999999998888 66777778999999999999
Q ss_pred EEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCC-----CCeEEEEcCCCCceEEEEcC
Q 014755 148 AICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPD-----DSAIVIWDSPLEYKVLIYSP 208 (419)
Q Consensus 148 ~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~l~~~~~~~~~~i~~~d~ 208 (419)
++++ +.|++||+++++.+..+.+|.++|+++.|.-+ |.+++... ..+..+.+|-.
T Consensus 160 ~~as-----~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa-~~~r~i~~w~v 219 (541)
T KOG4547|consen 160 LTAS-----RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSA-AAERGITVWVV 219 (541)
T ss_pred Eecc-----ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeecc-ccccceeEEEE
Confidence 9998 48999999999999999999999999999877 66666532 22344555544
No 273
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=99.47 E-value=3.4e-10 Score=100.01 Aligned_cols=227 Identities=16% Similarity=0.221 Sum_probs=147.9
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCCCcE---------------EE-EeecCcceeEEEEecCCCeEEEEeccCCeEEEE
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHSFKV---------------VQ-LFSCLDKISYIEWALDSEYILCGLYKRLMIQAW 75 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~~~~---------------~~-~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw 75 (419)
++|+.+..+||+|+ +|.+++..+.+... -+ +-+|.+.|.-+.|+.+.+.|-++..+ |.|.+|
T Consensus 20 ~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~-GlIiVW 98 (1189)
T KOG2041|consen 20 AEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTS-GLIIVW 98 (1189)
T ss_pred EEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCC-ceEEEE
Confidence 78999999999998 88899887654321 01 23589999999999988888777655 999999
Q ss_pred EccCCcceeeeecC--CccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCC--------
Q 014755 76 SLTQPEWTCKIDEG--LAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGK-------- 145 (419)
Q Consensus 76 ~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 145 (419)
-+-.+.+...+... .+-|.+++|+.||+.+...-.|+ .|.+=.++..+...-.........+.|++|.+
T Consensus 99 mlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDG-avIVGsvdGNRIwgKeLkg~~l~hv~ws~D~~~~Lf~~an 177 (1189)
T KOG2041|consen 99 MLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDG-AVIVGSVDGNRIWGKELKGQLLAHVLWSEDLEQALFKKAN 177 (1189)
T ss_pred eeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccC-CEEEEeeccceecchhcchheccceeecccHHHHHhhhcC
Confidence 99999876665443 35589999999999998887776 66555554433222111111123444444444
Q ss_pred -----------------------------------------------------EEEEEeecCCCCeEEEEeccCCeEEEE
Q 014755 146 -----------------------------------------------------FAAICTRRDCKDYINLLSCHTWEIMGV 172 (419)
Q Consensus 146 -----------------------------------------------------~l~~~~~~~~~g~v~i~d~~~~~~~~~ 172 (419)
.++++..+ |.+.+..-.+......
T Consensus 178 ge~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~n---Gr~QiMR~eND~~Pvv 254 (1189)
T KOG2041|consen 178 GETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYAN---GRMQIMRSENDPEPVV 254 (1189)
T ss_pred CcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcC---ceehhhhhcCCCCCeE
Confidence 34443332 3333332221111111
Q ss_pred EeccccceeeeeECCCCCeEEEEcCCCC-------ceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCc
Q 014755 173 FAVDTLDLADIEWSPDDSAIVIWDSPLE-------YKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQT 245 (419)
Q Consensus 173 ~~~~~~~v~~~~~~~~~~~l~~~~~~~~-------~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~ 245 (419)
+.. .-.+....|+++|..+++.....+ +.|.+|.+-|+.+..++.... .|++++|-..|-.++.+- |+.
T Consensus 255 ~dt-gm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fysp~G~i~gtlkvpg~--~It~lsWEg~gLriA~Av-dsf 330 (1189)
T KOG2041|consen 255 VDT-GMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYSPYGHIVGTLKVPGS--CITGLSWEGTGLRIAIAV-DSF 330 (1189)
T ss_pred Eec-ccEeecceecCCCcEEEEccCcccccCccccceEEEeccchhheEEEecCCc--eeeeeEEcCCceEEEEEe-cce
Confidence 111 134678899999999998422221 578899999999999887766 799999987776665443 344
Q ss_pred EEE
Q 014755 246 LRV 248 (419)
Q Consensus 246 i~v 248 (419)
|++
T Consensus 331 iyf 333 (1189)
T KOG2041|consen 331 IYF 333 (1189)
T ss_pred EEE
Confidence 444
No 274
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=99.47 E-value=1.9e-11 Score=107.60 Aligned_cols=279 Identities=16% Similarity=0.243 Sum_probs=183.2
Q ss_pred cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCc---------------ceeeeecCCccEeEEEECCCCCEEEEEec
Q 014755 46 CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPE---------------WTCKIDEGLAGIAYARWSPDSRHILTTSD 110 (419)
Q Consensus 46 ~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~---------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 110 (419)
......+++|+.+..++|+|+.| |.+++..+.+.. .-+++.+|...|.-+.|+.+.+.|-++..
T Consensus 13 nnvkL~c~~WNke~gyIAcgG~d-GlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt 91 (1189)
T KOG2041|consen 13 NNVKLHCAEWNKESGYIACGGAD-GLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDT 91 (1189)
T ss_pred CCceEEEEEEcccCCeEEecccc-ceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCC
Confidence 45678899999999999999987 999999886431 22456789999999999999888877777
Q ss_pred CCCeEEEEEcCCCeEEE--ecc-CCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEE-EEEeccccceeeeeEC
Q 014755 111 FQLRLTVWSLLNTACVH--VQS-PKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIM-GVFAVDTLDLADIEWS 186 (419)
Q Consensus 111 ~~~~i~iwd~~~~~~~~--~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~-~~~~~~~~~v~~~~~~ 186 (419)
++ .|.+|-+-.|.... +.. .+..|.+++|+.||..++....| |.|.+=.++..+.- +.++ ......+.|+
T Consensus 92 ~G-lIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeD---GavIVGsvdGNRIwgKeLk--g~~l~hv~ws 165 (1189)
T KOG2041|consen 92 SG-LIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYED---GAVIVGSVDGNRIWGKELK--GQLLAHVLWS 165 (1189)
T ss_pred Cc-eEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEcc---CCEEEEeeccceecchhcc--hheccceeec
Confidence 66 99999998877654 222 34456999999999999999887 77777665542221 1111 1234578899
Q ss_pred CCCCeEEEEcCCCCceEEEEcCCCceEEEEeecC----------CCCceeEEEEc--------cCCCeEEEEEecCcEEE
Q 014755 187 PDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYE----------SGLGVKSISWS--------PCGQFLAVGSYDQTLRV 248 (419)
Q Consensus 187 ~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~----------~~~~v~~~~~s--------~~~~~l~~~~~d~~i~v 248 (419)
+|.+.+++ .-.+|.+.+||..|.....+.... ....+..+.|. |+...++.+-..|.+.+
T Consensus 166 ~D~~~~Lf--~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~Qi 243 (1189)
T KOG2041|consen 166 EDLEQALF--KKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQI 243 (1189)
T ss_pred ccHHHHHh--hhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehh
Confidence 99988877 566799999998664333222110 00123444443 35566777766666655
Q ss_pred EEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCC
Q 014755 249 LNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTD 328 (419)
Q Consensus 249 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (419)
..-.+ .+.+ +.+.
T Consensus 244 MR~eN--------D~~P-------vv~d---------------------------------------------------- 256 (1189)
T KOG2041|consen 244 MRSEN--------DPEP-------VVVD---------------------------------------------------- 256 (1189)
T ss_pred hhhcC--------CCCC-------eEEe----------------------------------------------------
Confidence 43221 1111 1111
Q ss_pred CCCCCcceEEEEEccCCeEEEEecCCCC-------ceEEEeeccCCCceeecc-cCCCeeEEEeCCCCCeEEEEeCCCcE
Q 014755 329 KPNPKQGIGLMSWSSDSQYICTRNDSMP-------TTLWIWDICRQEPAAILV-QKDPIRAATWDPTCTRLVLCTGSSHL 400 (419)
Q Consensus 329 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~-------~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i 400 (419)
-.-.+..+.|+++|..||.++.+.+ +.|.+|.. -|+.+..+. ....|++++|-..|-.+|.+ .|+.|
T Consensus 257 ---tgm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fysp-~G~i~gtlkvpg~~It~lsWEg~gLriA~A-vdsfi 331 (1189)
T KOG2041|consen 257 ---TGMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYSP-YGHIVGTLKVPGSCITGLSWEGTGLRIAIA-VDSFI 331 (1189)
T ss_pred ---cccEeecceecCCCcEEEEccCcccccCccccceEEEecc-chhheEEEecCCceeeeeEEcCCceEEEEE-ecceE
Confidence 1123678899999999999876521 34666553 355555554 66789999997776666544 24455
Q ss_pred EEeec
Q 014755 401 YMWTP 405 (419)
Q Consensus 401 ~vw~~ 405 (419)
.+=++
T Consensus 332 yfanI 336 (1189)
T KOG2041|consen 332 YFANI 336 (1189)
T ss_pred EEEee
Confidence 44333
No 275
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.46 E-value=1.1e-11 Score=106.64 Aligned_cols=188 Identities=15% Similarity=0.155 Sum_probs=143.5
Q ss_pred cCCCEEEEEeecCCCCeEEEEeccCCeEEEEEecc---ccceeeeeE------CC--------------CCCeEEEEcCC
Q 014755 142 QDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVD---TLDLADIEW------SP--------------DDSAIVIWDSP 198 (419)
Q Consensus 142 ~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~---~~~v~~~~~------~~--------------~~~~l~~~~~~ 198 (419)
|...++|....+ |.+++|+...++....+.+. .+...+..| +| +-..++. +.
T Consensus 3 ~~~~~~A~~~~~---g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvl--gt 77 (541)
T KOG4547|consen 3 PALDYFALSTGD---GRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVL--GT 77 (541)
T ss_pred chhheEeecCCC---CeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEe--ec
Confidence 445678877766 89999999988877766542 122333333 22 1123334 66
Q ss_pred CCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceecc
Q 014755 199 LEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKE 277 (419)
Q Consensus 199 ~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (419)
..|.|.+|+. .|+.-..+....|.+.|.++.++.+-..|.+++.|+.+..|+..+.+.++.+..
T Consensus 78 ~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~--------------- 142 (541)
T KOG4547|consen 78 PQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKE--------------- 142 (541)
T ss_pred CCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeecc---------------
Confidence 7899999999 788878888777777999999999989999999999999999988777666541
Q ss_pred CCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCc
Q 014755 278 VDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPT 357 (419)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~ 357 (419)
....+.+++++|||..+++++ +
T Consensus 143 ------------------------------------------------------~~~~~~sl~is~D~~~l~~as----~ 164 (541)
T KOG4547|consen 143 ------------------------------------------------------QKPLVSSLCISPDGKILLTAS----R 164 (541)
T ss_pred ------------------------------------------------------CCCccceEEEcCCCCEEEecc----c
Confidence 222367899999999999998 6
Q ss_pred eEEEeeccCCCceeec-ccCCCeeEEEeCCC-----CCeE-EEEeCCCcEEEeecCC
Q 014755 358 TLWIWDICRQEPAAIL-VQKDPIRAATWDPT-----CTRL-VLCTGSSHLYMWTPSG 407 (419)
Q Consensus 358 ~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~-----~~~l-~s~~~dg~i~vw~~~~ 407 (419)
.|++||+++++++..+ +|.++|++++|..+ |.++ .+...+.-+.+|-++.
T Consensus 165 ~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~ 221 (541)
T KOG4547|consen 165 QIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEK 221 (541)
T ss_pred eEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEc
Confidence 8999999999988777 69999999999877 5554 4455566788887763
No 276
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=99.43 E-value=1.5e-09 Score=94.76 Aligned_cols=225 Identities=16% Similarity=0.224 Sum_probs=128.4
Q ss_pred cCCCCEEEEEe----------CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceee
Q 014755 16 SPNARYIAVAV----------DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCK 85 (419)
Q Consensus 16 s~d~~~la~~~----------~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~ 85 (419)
|||+++++... .+.+.|+|+++++...+......+....|||+|+.++... + +.|.+++..+++.. +
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~~~~~~~~~~sP~g~~~~~v~-~-~nly~~~~~~~~~~-~ 77 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPPPPKLQDAKWSPDGKYIAFVR-D-NNLYLRDLATGQET-Q 77 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-EETTBSEEEE-SSSTEEEEEE-T-TEEEEESSTTSEEE-E
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCCccccccceeecCCCeeEEEe-c-CceEEEECCCCCeE-E
Confidence 79999999853 3458899999988877665567899999999999999997 3 68999998877443 3
Q ss_pred eec-C-----------------CccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCC---CCeeeEEEccCC
Q 014755 86 IDE-G-----------------LAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPK---HASKGVAFTQDG 144 (419)
Q Consensus 86 ~~~-~-----------------~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~ 144 (419)
++. . -+.-..+-||||+++|+....|...|..+.+.. ..... ..+..+.+-.-|
T Consensus 78 lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~-----~~~~~~~yp~~~~~~YPk~G 152 (353)
T PF00930_consen 78 LTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPD-----YSPPDSQYPEVESIRYPKAG 152 (353)
T ss_dssp SES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEE-----ESSSTESS-EEEEEE--BTT
T ss_pred eccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeec-----cCCccccCCcccccccCCCC
Confidence 322 1 112356889999999999875543555554321 11111 122344443333
Q ss_pred CEEEEEeecCCCCeEEEEeccCCeEEEE--E---eccccceeeeeECCCCC-eEEEEcCCCC--ceEEEEcC-CCceEEE
Q 014755 145 KFAAICTRRDCKDYINLLSCHTWEIMGV--F---AVDTLDLADIEWSPDDS-AIVIWDSPLE--YKVLIYSP-DGRCLLK 215 (419)
Q Consensus 145 ~~l~~~~~~~~~g~v~i~d~~~~~~~~~--~---~~~~~~v~~~~~~~~~~-~l~~~~~~~~--~~i~~~d~-~~~~~~~ 215 (419)
..... -.+.++|+.+++.... . ......+..+.|.++++ .++.+-.... ..+.++|. ++.....
T Consensus 153 ~~np~-------v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~ 225 (353)
T PF00930_consen 153 DPNPR-------VSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVV 225 (353)
T ss_dssp S---E-------EEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEE
T ss_pred CcCCc-------eEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEE
Confidence 32221 1578889888765322 1 22346688999999999 4443322222 34566676 5544333
Q ss_pred EeecCCC--CceeEEEEc-cCCCeEE-EEEecC--cEEEEEcCCce
Q 014755 216 YQAYESG--LGVKSISWS-PCGQFLA-VGSYDQ--TLRVLNHLTWK 255 (419)
Q Consensus 216 ~~~~~~~--~~v~~~~~s-~~~~~l~-~~~~d~--~i~v~d~~~~~ 255 (419)
....... ..-..+.+. +++..++ ....+| .|.+++...+.
T Consensus 226 ~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~ 271 (353)
T PF00930_consen 226 LEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGK 271 (353)
T ss_dssp EEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSE
T ss_pred EEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEcccccc
Confidence 3222211 122355554 6665444 444555 45556655544
No 277
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=99.41 E-value=1e-11 Score=113.64 Aligned_cols=190 Identities=14% Similarity=0.133 Sum_probs=153.1
Q ss_pred EEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCcc----EeEEEECCCCCEEEEEecCCCeEEEEEcCC-CeEEEe
Q 014755 54 EWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAG----IAYARWSPDSRHILTTSDFQLRLTVWSLLN-TACVHV 128 (419)
Q Consensus 54 ~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~-~~~~~~ 128 (419)
.+..+.+.++.++.+ +.+.+||...+.....+...... ..-+.++++.-++++++-.+ .|.+|+... ..+.++
T Consensus 94 ~l~~e~k~i~l~~~~-ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~-~iivW~~~~dn~p~~l 171 (967)
T KOG0974|consen 94 KLFEENKKIALVTSR-NSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFG-EIIVWKPHEDNKPIRL 171 (967)
T ss_pred chhhhcceEEEEEcC-ceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccc-cEEEEeccccCCccee
Confidence 334456677777766 58999999887666555433221 22344577777888888777 999999874 334458
Q ss_pred ccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEE-EEeccccceeeeeECCCCCeEEEEcCCCCceEEEEc
Q 014755 129 QSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMG-VFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYS 207 (419)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d 207 (419)
.+|.+.+..+.++-||+++++.++| ..+++|++++.+... ..-+|...+..+.|.|+ .+++ .+.|.+.++|+
T Consensus 172 ~GHeG~iF~i~~s~dg~~i~s~SdD---RsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t--~gedctcrvW~ 244 (967)
T KOG0974|consen 172 KGHEGSIFSIVTSLDGRYIASVSDD---RSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIIT--VGEDCTCRVWG 244 (967)
T ss_pred cccCCceEEEEEccCCcEEEEEecC---cceeeeecccccccCcccccccceeEEEEeccc--eeEE--eccceEEEEEe
Confidence 9999999999999999999999998 899999999987776 66789999999999998 6777 67799999999
Q ss_pred CCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCC
Q 014755 208 PDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLT 253 (419)
Q Consensus 208 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~ 253 (419)
.++..+..+..|... .+..++..++...+++++.|+.+++|++..
T Consensus 245 ~~~~~l~~y~~h~g~-~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~ 289 (967)
T KOG0974|consen 245 VNGTQLEVYDEHSGK-GIWKIAVPIGVIIKVTGGNDSTLKLWDLNG 289 (967)
T ss_pred cccceehhhhhhhhc-ceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence 988888888777544 799999999999999999999999999764
No 278
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=99.40 E-value=1.8e-09 Score=95.78 Aligned_cols=261 Identities=10% Similarity=-0.032 Sum_probs=159.7
Q ss_pred CCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeee-
Q 014755 59 SEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKG- 137 (419)
Q Consensus 59 ~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~- 137 (419)
+..+++++.+ |.+..+|..+|+.+............+. .++..+++++.++ .+..+|.++|+.+........+.+
T Consensus 65 ~~~v~v~~~~-g~v~a~d~~tG~~~W~~~~~~~~~~~p~--v~~~~v~v~~~~g-~l~ald~~tG~~~W~~~~~~~~~~~ 140 (377)
T TIGR03300 65 GGKVYAADAD-GTVVALDAETGKRLWRVDLDERLSGGVG--ADGGLVFVGTEKG-EVIALDAEDGKELWRAKLSSEVLSP 140 (377)
T ss_pred CCEEEEECCC-CeEEEEEccCCcEeeeecCCCCcccceE--EcCCEEEEEcCCC-EEEEEECCCCcEeeeeccCceeecC
Confidence 5677777765 8999999999987765543332112222 2466777777776 999999999887763322333321
Q ss_pred EEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccce-----eeeeECCCCCeEEEEcCCCCceEEEEcC-CCc
Q 014755 138 VAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDL-----ADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGR 211 (419)
Q Consensus 138 ~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~ 211 (419)
... .+..++++..+ +.++.+|.++++.+-......... ...... + ..+++ +..++.+..+|+ +|+
T Consensus 141 p~v--~~~~v~v~~~~---g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~-~-~~v~~--~~~~g~v~ald~~tG~ 211 (377)
T TIGR03300 141 PLV--ANGLVVVRTND---GRLTALDAATGERLWTYSRVTPALTLRGSASPVIA-D-GGVLV--GFAGGKLVALDLQTGQ 211 (377)
T ss_pred CEE--ECCEEEEECCC---CeEEEEEcCCCceeeEEccCCCceeecCCCCCEEE-C-CEEEE--ECCCCEEEEEEccCCC
Confidence 122 23456665554 799999999998876655432211 111111 2 34444 455789999998 887
Q ss_pred eEEEEeecCCC--Cc---e----eEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcc
Q 014755 212 CLLKYQAYESG--LG---V----KSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPL 282 (419)
Q Consensus 212 ~~~~~~~~~~~--~~---v----~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (419)
.+......... .. . ....+ .+..++.++.+|.++.||..+|+.+.......
T Consensus 212 ~~W~~~~~~~~g~~~~~~~~~~~~~p~~--~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~~------------------ 271 (377)
T TIGR03300 212 PLWEQRVALPKGRTELERLVDVDGDPVV--DGGQVYAVSYQGRVAALDLRSGRVLWKRDASS------------------ 271 (377)
T ss_pred EeeeeccccCCCCCchhhhhccCCccEE--ECCEEEEEEcCCEEEEEECCCCcEEEeeccCC------------------
Confidence 66543321100 00 0 11112 34577888889999999999887655432000
Q ss_pred cccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEe
Q 014755 283 QLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIW 362 (419)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iw 362 (419)
...+. .++..++.++.+ |.++.+
T Consensus 272 -----------------------------------------------------~~~p~--~~~~~vyv~~~~--G~l~~~ 294 (377)
T TIGR03300 272 -----------------------------------------------------YQGPA--VDDNRLYVTDAD--GVVVAL 294 (377)
T ss_pred -----------------------------------------------------ccCce--EeCCEEEEECCC--CeEEEE
Confidence 01111 234566667777 999999
Q ss_pred eccCCCceeecc-c-CCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEE
Q 014755 363 DICRQEPAAILV-Q-KDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCV 411 (419)
Q Consensus 363 d~~~~~~~~~~~-~-~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~ 411 (419)
|..+++.+.... . .....+... .+..|++++.+|.|.++|..+++++
T Consensus 295 d~~tG~~~W~~~~~~~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~~ 343 (377)
T TIGR03300 295 DRRSGSELWKNDELKYRQLTAPAV--VGGYLVVGDFEGYLHWLSREDGSFV 343 (377)
T ss_pred ECCCCcEEEccccccCCccccCEE--ECCEEEEEeCCCEEEEEECCCCCEE
Confidence 999998765442 1 112222233 3568888999999999999877765
No 279
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=99.39 E-value=4.7e-09 Score=87.00 Aligned_cols=217 Identities=16% Similarity=0.100 Sum_probs=142.8
Q ss_pred CeEEcC-CCCEEEEEe-CCeEEEEecCCCcEEEEeecCcceeEEEEe-cCCCeEEEEeccCCeEEEEEccCCcceeeeec
Q 014755 12 PSCFSP-NARYIAVAV-DYRLVVRDAHSFKVVQLFSCLDKISYIEWA-LDSEYILCGLYKRLMIQAWSLTQPEWTCKIDE 88 (419)
Q Consensus 12 ~~~~s~-d~~~la~~~-~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~ 88 (419)
.++|.+ ++.++++-. .+.|..|+..+++... +.... ...+++. +++.++++. . +.+.++|+.+++.......
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~~~-~~G~~~~~~~g~l~v~~-~--~~~~~~d~~~g~~~~~~~~ 78 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-IDLPG-PNGMAFDRPDGRLYVAD-S--GGIAVVDPDTGKVTVLADL 78 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EESSS-EEEEEEECTTSEEEEEE-T--TCEEEEETTTTEEEEEEEE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-EecCC-CceEEEEccCCEEEEEE-c--CceEEEecCCCcEEEEeec
Confidence 367888 555555543 7889999998876554 33333 6777887 675554444 3 4577779988865433332
Q ss_pred -----CCccEeEEEECCCCCEEEEEecCC-------CeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCC
Q 014755 89 -----GLAGIAYARWSPDSRHILTTSDFQ-------LRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCK 156 (419)
Q Consensus 89 -----~~~~v~~~~~~~~~~~l~~~~~~~-------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 156 (419)
.....+.+++.|+|+..++..... +.|..++.. ++.......-...+.++|+|+++.|+++... .
T Consensus 79 ~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~pNGi~~s~dg~~lyv~ds~--~ 155 (246)
T PF08450_consen 79 PDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGFPNGIAFSPDGKTLYVADSF--N 155 (246)
T ss_dssp ETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESSEEEEEEETTSSEEEEEETT--T
T ss_pred cCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEecCcccccceEECCcchheeecccc--c
Confidence 235688999999999666654321 367777777 5655543334556899999999988876543 4
Q ss_pred CeEEEEeccC--CeE--EEEE---eccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEE
Q 014755 157 DYINLLSCHT--WEI--MGVF---AVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSIS 229 (419)
Q Consensus 157 g~v~i~d~~~--~~~--~~~~---~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~ 229 (419)
+.|..+++.. .+. .+.+ ....+....+++..+|+..+. ....+.|.+++.+|+.+..+..... .+++++
T Consensus 156 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va--~~~~~~I~~~~p~G~~~~~i~~p~~--~~t~~~ 231 (246)
T PF08450_consen 156 GRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVA--DWGGGRIVVFDPDGKLLREIELPVP--RPTNCA 231 (246)
T ss_dssp TEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEE--EETTTEEEEEETTSCEEEEEE-SSS--SEEEEE
T ss_pred ceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEE--EcCCCEEEEECCCccEEEEEcCCCC--CEEEEE
Confidence 7899999863 211 1222 222234788999999986665 3357899999999999998887644 799999
Q ss_pred Ec-cCCCeEEEE
Q 014755 230 WS-PCGQFLAVG 240 (419)
Q Consensus 230 ~s-~~~~~l~~~ 240 (419)
|. ++.+.|+..
T Consensus 232 fgg~~~~~L~vT 243 (246)
T PF08450_consen 232 FGGPDGKTLYVT 243 (246)
T ss_dssp EESTTSSEEEEE
T ss_pred EECCCCCEEEEE
Confidence 94 665555443
No 280
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=99.37 E-value=7.6e-10 Score=87.50 Aligned_cols=231 Identities=13% Similarity=0.108 Sum_probs=135.0
Q ss_pred eEEcCCCCEEEEEeCCeEEEEecCCCc--EEE---Ee-ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeee
Q 014755 13 SCFSPNARYIAVAVDYRLVVRDAHSFK--VVQ---LF-SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKI 86 (419)
Q Consensus 13 ~~~s~d~~~la~~~~~~i~i~~~~~~~--~~~---~~-~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~ 86 (419)
++.++||++||..-|..|.|-.....- ++. .. .....-.-++||||+..||.+... |+|+++|+...++ ..+
T Consensus 3 ~~~~~~Gk~lAi~qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~-G~i~vfdl~g~~l-f~I 80 (282)
T PF15492_consen 3 LALSSDGKLLAILQDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAEST-GTIRVFDLMGSEL-FVI 80 (282)
T ss_pred eeecCCCcEEEEEeccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCC-CeEEEEeccccee-EEc
Confidence 578899999999999999988665421 111 11 123346789999999999999876 9999999976433 233
Q ss_pred ecC-------CccEeEEEECCCC------CEEEEEecCCCeEEEEEcCCC-----eEEE-e---ccCCCCeeeEEEccCC
Q 014755 87 DEG-------LAGIAYARWSPDS------RHILTTSDFQLRLTVWSLLNT-----ACVH-V---QSPKHASKGVAFTQDG 144 (419)
Q Consensus 87 ~~~-------~~~v~~~~~~~~~------~~l~~~~~~~~~i~iwd~~~~-----~~~~-~---~~~~~~~~~~~~~~~~ 144 (419)
... ...|..+.|.+-. ..|++....+ .++-|-+..+ +... + ...+..+.++.++|.-
T Consensus 81 ~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G-~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h 159 (282)
T PF15492_consen 81 PPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRG-QLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKH 159 (282)
T ss_pred CcccccCCccccceeeeEeeccccccccceeEEEEeccc-eeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCC
Confidence 221 2357777775532 2355555554 6776665321 1111 2 2346788999999999
Q ss_pred CEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCC------ceEEEEcC-CCceEEEEe
Q 014755 145 KFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLE------YKVLIYSP-DGRCLLKYQ 217 (419)
Q Consensus 145 ~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~------~~i~~~d~-~~~~~~~~~ 217 (419)
+.|++++....+... .. .....+++-..-.+..+........+ .+..++.+ +.+... ..
T Consensus 160 ~LLlVgG~~~~~~~~--s~-----------a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs-~~ 225 (282)
T PF15492_consen 160 RLLLVGGCEQNQDGM--SK-----------ASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFS-RQ 225 (282)
T ss_pred CEEEEeccCCCCCcc--cc-----------ccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeee-cc
Confidence 998888754211000 00 00111111111111111111000101 01122222 111111 11
Q ss_pred ecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeec
Q 014755 218 AYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 218 ~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 261 (419)
. .....|..|..||||+.||+...+|.|.+|++.+-+..+...
T Consensus 226 ~-~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~ 268 (282)
T PF15492_consen 226 G-QEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWK 268 (282)
T ss_pred c-cCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccc
Confidence 1 122379999999999999999999999999999887777665
No 281
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=99.36 E-value=1.5e-10 Score=101.46 Aligned_cols=202 Identities=15% Similarity=0.161 Sum_probs=139.2
Q ss_pred eEEcCCCCEEEEEe---CC--eEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCC--eEEEEEccCCcceee
Q 014755 13 SCFSPNARYIAVAV---DY--RLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRL--MIQAWSLTQPEWTCK 85 (419)
Q Consensus 13 ~~~s~d~~~la~~~---~~--~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g--~i~iw~~~~~~~~~~ 85 (419)
-+|+|+++.++..+ .+ .+.++++.+++........+.-...+|+|||+.|+.....+| .|.+.|+.++... .
T Consensus 198 p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~-~ 276 (425)
T COG0823 198 PAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLP-R 276 (425)
T ss_pred cccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCCccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCcce-e
Confidence 47999999988875 33 499999999988877776677778899999999998876656 4566677766633 4
Q ss_pred eecCCccEeEEEECCCCCEEEEEecCCC--eEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEe
Q 014755 86 IDEGLAGIAYARWSPDSRHILTTSDFQL--RLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLS 163 (419)
Q Consensus 86 ~~~~~~~v~~~~~~~~~~~l~~~~~~~~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d 163 (419)
+....+.-..-.|+|||++++..++.+| .|.+++++.+...++......-....|+|||++|+..+..++.-.|.+.|
T Consensus 277 Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~ 356 (425)
T COG0823 277 LTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKND 356 (425)
T ss_pred cccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEeeccCCCCcCccCCCCCCEEEEEeccCCceeeEEec
Confidence 5555555557889999999999987655 46666777777666555444445889999999999988542222377777
Q ss_pred ccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCC-CceEEEEcCCCceEEEE
Q 014755 164 CHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPL-EYKVLIYSPDGRCLLKY 216 (419)
Q Consensus 164 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~~~i~~~d~~~~~~~~~ 216 (419)
+.++...+.+. .........|.++++.+....... +..+..-+.+++....+
T Consensus 357 ~~~~~~~~~lt-~~~~~e~ps~~~ng~~i~~~s~~~~~~~l~~~s~~g~~~~~~ 409 (425)
T COG0823 357 LASGGKIRILT-STYLNESPSWAPNGRMIMFSSGQGGGSVLSLVSLDGRVSRPL 409 (425)
T ss_pred cCCCCcEEEcc-ccccCCCCCcCCCCceEEEeccCCCCceEEEeeccceeEEEE
Confidence 76655433333 233445677889999888744433 22333333355554433
No 282
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=99.36 E-value=7.5e-10 Score=87.40 Aligned_cols=260 Identities=13% Similarity=0.156 Sum_probs=166.1
Q ss_pred CeEEEEEccCCccee--e-eecCCccEeEEEECC---CCC-EEEEEecCCCeEEEEEcCCCeEEE-eccCC---C---Ce
Q 014755 70 LMIQAWSLTQPEWTC--K-IDEGLAGIAYARWSP---DSR-HILTTSDFQLRLTVWSLLNTACVH-VQSPK---H---AS 135 (419)
Q Consensus 70 g~i~iw~~~~~~~~~--~-~~~~~~~v~~~~~~~---~~~-~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~---~---~~ 135 (419)
|.+.+|++...+... . .......+..+.|.. +|. .++-+-..+ .|.++.....+... +.+.. - ..
T Consensus 46 Gkl~Lys~~d~~~~~l~~~q~~dts~~~dm~w~~~~~~g~~~l~~a~a~G-~i~~~r~~~~~ss~~L~~ls~~ki~~~~~ 124 (339)
T KOG0280|consen 46 GKLHLYSLEDMKLSPLDTLQCTDTSTEFDMLWRIRETDGDFNLLDAHARG-QIQLYRNDEDESSVHLRGLSSKKISVVEA 124 (339)
T ss_pred cceEEEeecccccCccceeeeecccccceeeeeeccCCccceeeeccccc-eEEEEeeccceeeeeecccchhhhhheee
Confidence 567788877654432 1 112334566677753 444 233344444 88888766533322 22221 1 23
Q ss_pred eeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEE--EEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC--CCc
Q 014755 136 KGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMG--VFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP--DGR 211 (419)
Q Consensus 136 ~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~--~~~ 211 (419)
.++.|++.+..+++.-.+ |.+.+.+........ .++.|+.++.-..|+.....++.. ++.|+.+..||+ .++
T Consensus 125 lslD~~~~~~~i~vs~s~---G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvyt-GgDD~~l~~~D~R~p~~ 200 (339)
T KOG0280|consen 125 LSLDISTSGTKIFVSDSR---GSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYT-GGDDGSLSCWDIRIPKT 200 (339)
T ss_pred eEEEeeccCceEEEEcCC---CcEEEEecceeeeeecccccccceeeeeeecccCCCceEEe-cCCCceEEEEEecCCcc
Confidence 578889888888777654 778866655554444 788999999999998777655443 778999999999 343
Q ss_pred eEEE-EeecCCCCceeEEEEcc-CCCeEEEEEecCcEEEEEcCC-ceeeeeecccccccCCCccceeccCCCccccccee
Q 014755 212 CLLK-YQAYESGLGVKSISWSP-CGQFLAVGSYDQTLRVLNHLT-WKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSE 288 (419)
Q Consensus 212 ~~~~-~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (419)
.+.. ...|.. .|.++.-+| .+.+|++|+.|..|++||.++ ++++..-
T Consensus 201 ~i~~n~kvH~~--GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~---------------------------- 250 (339)
T KOG0280|consen 201 FIWHNSKVHTS--GVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKA---------------------------- 250 (339)
T ss_pred eeeecceeeec--ceEEEecCCCCCceEEEeccccceeeeehhcccCccccC----------------------------
Confidence 3332 333333 788888776 577999999999999999874 3333221
Q ss_pred eeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccC--CeEEEEecCCCCceEEEeeccC
Q 014755 289 LCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSD--SQYICTRNDSMPTTLWIWDICR 366 (419)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--g~~l~~~~~d~~~~i~iwd~~~ 366 (419)
.-.++|..+..+|. ++.|+++-. +-.+|-+.+.
T Consensus 251 ------------------------------------------~v~GGVWRi~~~p~~~~~lL~~CMh---~G~ki~~~~~ 285 (339)
T KOG0280|consen 251 ------------------------------------------KVGGGVWRIKHHPEIFHRLLAACMH---NGAKILDSSD 285 (339)
T ss_pred ------------------------------------------ccccceEEEEecchhhhHHHHHHHh---cCceEEEecc
Confidence 12356888888885 344555544 4566766665
Q ss_pred CCce-----eec-ccCCCeeEEEeCCCCCeEEEEeC-CCcEE-EeecCCCe
Q 014755 367 QEPA-----AIL-VQKDPIRAATWDPTCTRLVLCTG-SSHLY-MWTPSGAY 409 (419)
Q Consensus 367 ~~~~-----~~~-~~~~~v~~~~~s~~~~~l~s~~~-dg~i~-vw~~~~~~ 409 (419)
+... ... .|.+-.+.-.|.....+||+++. |+.++ +|-.-+++
T Consensus 286 ~~~e~~~~~~s~~~hdSl~YG~DWd~~~~~lATCsFYDk~~~~~Wl~~t~~ 336 (339)
T KOG0280|consen 286 KVLEFQIVLPSDKIHDSLCYGGDWDSKDSFLATCSFYDKKIRQLWLHITGE 336 (339)
T ss_pred cccchheeeeccccccceeeccccccccceeeeeeccccceeeeeeeccCC
Confidence 4322 222 47788888888666668998764 77755 88766554
No 283
>KOG1912 consensus WD40 repeat protein [General function prediction only]
Probab=99.36 E-value=6.1e-10 Score=99.25 Aligned_cols=367 Identities=15% Similarity=0.092 Sum_probs=210.2
Q ss_pred EEEEEe-CCeEEEEecCCCcEEEEee-cCcceeEEEEec---CC-CeEEEEeccCCeEEEEEccCCcceeeeecCCccEe
Q 014755 21 YIAVAV-DYRLVVRDAHSFKVVQLFS-CLDKISYIEWAL---DS-EYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIA 94 (419)
Q Consensus 21 ~la~~~-~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~---~~-~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~ 94 (419)
+||++. .|+|.+||...+..+..+. |.+++..+.|-| +. ..|++.... ..+.+|+..+|+.............
T Consensus 81 liAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~s-s~lvLwntdtG~k~Wk~~ys~~iLs 159 (1062)
T KOG1912|consen 81 LIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGS-STLVLWNTDTGEKFWKYDYSHEILS 159 (1062)
T ss_pred eEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCC-cEEEEEEccCCceeeccccCCccee
Confidence 445554 6889999999888776665 678899999977 34 345544444 6999999999998887777777788
Q ss_pred EEEECC-CCCEEEEEecCCCeEEEEEcCC-------CeEEEec-cCCC-------------------Ce------eeEEE
Q 014755 95 YARWSP-DSRHILTTSDFQLRLTVWSLLN-------TACVHVQ-SPKH-------------------AS------KGVAF 140 (419)
Q Consensus 95 ~~~~~~-~~~~l~~~~~~~~~i~iwd~~~-------~~~~~~~-~~~~-------------------~~------~~~~~ 140 (419)
|+.+.| |.+++...+..+ .+.+-+.-. ++..++. .|.. .. ..++|
T Consensus 160 ~f~~DPfd~rh~~~l~s~g-~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf 238 (1062)
T KOG1912|consen 160 CFRVDPFDSRHFCVLGSKG-FVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAF 238 (1062)
T ss_pred eeeeCCCCcceEEEEccCc-eEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhc
Confidence 899988 666666666555 665554321 2333321 1111 00 24567
Q ss_pred ccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-C-C--------
Q 014755 141 TQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-D-G-------- 210 (419)
Q Consensus 141 ~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~-~-------- 210 (419)
+|.-+.++..... ..+.++|++-...+.......+.+.-+.+-|+++.=+.+....+|.+.+|-. . .
T Consensus 239 ~p~~rn~lfi~~p---rellv~dle~~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~~~~~f~~~~~ 315 (1062)
T KOG1912|consen 239 SPHWRNILFITFP---RELLVFDLEYECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKEEPTEFKKPNA 315 (1062)
T ss_pred ChhhhceEEEEec---cceEEEcchhhceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEEeeccCccccccch
Confidence 8876655555553 5899999998888888877777777888888876544433677888888865 1 1
Q ss_pred -------ceEEEEeecCCCCceeEEEEccC-CCeEEEEEecCcEEEEEcCCcee--------------------------
Q 014755 211 -------RCLLKYQAYESGLGVKSISWSPC-GQFLAVGSYDQTLRVLNHLTWKT-------------------------- 256 (419)
Q Consensus 211 -------~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~d~~i~v~d~~~~~~-------------------------- 256 (419)
.....+...+.. .+...+..|. ...++.--.+|.+.+|.+.+++.
T Consensus 316 ~l~~dl~~Q~~~vr~m~~~-rp~~~~~cPs~~sa~avl~s~g~~~~w~l~~~ri~~~~~s~~iel~~pf~f~~~~~~v~k 394 (1062)
T KOG1912|consen 316 SLSMDLGEQVHVVRPMEEF-RPVIGASCPSTPSALAVLYSSGDSTFWQLSNGRIHLDYRSSSIELVLPFDFNLSTKLVGK 394 (1062)
T ss_pred hhccccccceEEEeechhc-ccceeecCCCChhhhhhhhhcchhHHHhhhcCCcCcccccccccccccccccCceeehhh
Confidence 111111111110 1112222232 12222222334444554442210
Q ss_pred --eeeec----cccccc-----C-CCccceeccCCC--cccccceeeeccCccccccccccCCceEEEEEeccCCCCCCC
Q 014755 257 --FAEFM----HLSTVR-----G-PCFPAVFKEVDE--PLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPF 322 (419)
Q Consensus 257 --~~~~~----~~~~~~-----~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (419)
+..+. |+.... . |.-...-.+.+. |.+ .+..++++ +.......+++...
T Consensus 395 ~~l~~LS~dg~h~sGs~~~~~~p~p~~t~~~~~p~~n~~~~-~~pLvAvG----------T~sGTV~vvdvst~------ 457 (1062)
T KOG1912|consen 395 TSLISLSDDGSHSSGSTCVRMRPMPELTKVENDPGGNTPAG-TVPLVAVG----------TNSGTVDVVDVSTN------ 457 (1062)
T ss_pred ccccchhhcCCCCCCceeeecccCcccceeecCCCCCccce-eeeeEEee----------cCCceEEEEEecch------
Confidence 00000 100000 0 111111111000 000 01111111 11222333333322
Q ss_pred CCCCCCCCCCCcceEEEEEccCCeEEEEecCCC-------CceEEEeeccCCCceeecc----cCCCeeEEEeCCCCCeE
Q 014755 323 QKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSM-------PTTLWIWDICRQEPAAILV----QKDPIRAATWDPTCTRL 391 (419)
Q Consensus 323 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~-------~~~i~iwd~~~~~~~~~~~----~~~~v~~~~~s~~~~~l 391 (419)
.....+..|...|.++.|-.+.+++-.+.... .+.+.+-|+++|.-..+.+ ...+|+.+..|..+++|
T Consensus 458 -~v~~~fsvht~~VkgleW~g~sslvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~fR~l~~~despI~~irvS~~~~yL 536 (1062)
T KOG1912|consen 458 -AVAASFSVHTSLVKGLEWLGNSSLVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRFRGLQKPDESPIRAIRVSSSGRYL 536 (1062)
T ss_pred -hhhhhhcccccceeeeeeccceeEEEeeeccccccccceeeeEEEEEcccccccccccCCCCCcCcceeeeecccCceE
Confidence 12233445888899999987776664432210 1567888999987665552 56789999999999999
Q ss_pred EEEeCCCcEEEeecCCCeEE
Q 014755 392 VLCTGSSHLYMWTPSGAYCV 411 (419)
Q Consensus 392 ~s~~~dg~i~vw~~~~~~~~ 411 (419)
+..-.|.-+.+||+++..++
T Consensus 537 ai~Fr~~plEiwd~kt~~~l 556 (1062)
T KOG1912|consen 537 AILFRREPLEIWDLKTLRML 556 (1062)
T ss_pred EEEecccchHHHhhccchHH
Confidence 99999999999999765543
No 284
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=99.35 E-value=2.3e-08 Score=82.95 Aligned_cols=225 Identities=15% Similarity=0.135 Sum_probs=144.4
Q ss_pred eEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEc-cCCCEEEEEeecCCCCeEEEEeccCCeEEEE
Q 014755 94 AYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFT-QDGKFAAICTRRDCKDYINLLSCHTWEIMGV 172 (419)
Q Consensus 94 ~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~ 172 (419)
.++.|.+....|+.+...++.|..|+..+++...+.... ...+++. +++. ++++.. +.+.++|..+++....
T Consensus 3 Egp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~~~~~~--~~G~~~~~~~g~-l~v~~~----~~~~~~d~~~g~~~~~ 75 (246)
T PF08450_consen 3 EGPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEVIDLPG--PNGMAFDRPDGR-LYVADS----GGIAVVDPDTGKVTVL 75 (246)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEESSS--EEEEEEECTTSE-EEEEET----TCEEEEETTTTEEEEE
T ss_pred cceEEECCCCEEEEEEcCCCEEEEEECCCCeEEEEecCC--CceEEEEccCCE-EEEEEc----CceEEEecCCCcEEEE
Confidence 357888855566666655559999999998876644333 6777777 6654 444443 3677779988866554
Q ss_pred Eec-----cccceeeeeECCCCCeEEEEcCCCC------ceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEE-E
Q 014755 173 FAV-----DTLDLADIEWSPDDSAIVIWDSPLE------YKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAV-G 240 (419)
Q Consensus 173 ~~~-----~~~~v~~~~~~~~~~~l~~~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~ 240 (419)
... .....+.+++.|+|+..+.-..... +.++.++..++........ . ..+.++|+|+++.|+. -
T Consensus 76 ~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~-~--~pNGi~~s~dg~~lyv~d 152 (246)
T PF08450_consen 76 ADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPDGKVTVVADGL-G--FPNGIAFSPDGKTLYVAD 152 (246)
T ss_dssp EEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETTSEEEEEEEEE-S--SEEEEEEETTSSEEEEEE
T ss_pred eeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCCCeEEEEecCc-c--cccceEECCcchheeecc
Confidence 443 3356789999999996654222111 6788888885544444332 2 5889999999987764 4
Q ss_pred EecCcEEEEEcCCcee-eeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCC
Q 014755 241 SYDQTLRVLNHLTWKT-FAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPIS 319 (419)
Q Consensus 241 ~~d~~i~v~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (419)
+..+.|..|++..... +.... .| ..+
T Consensus 153 s~~~~i~~~~~~~~~~~~~~~~------------~~-----------------------------------~~~------ 179 (246)
T PF08450_consen 153 SFNGRIWRFDLDADGGELSNRR------------VF-----------------------------------IDF------ 179 (246)
T ss_dssp TTTTEEEEEEEETTTCCEEEEE------------EE-----------------------------------EE-------
T ss_pred cccceeEEEeccccccceeeee------------eE-----------------------------------EEc------
Confidence 5667888888753221 11110 00 000
Q ss_pred CCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc-cCCCeeEEEe-CCCCCeEEEE
Q 014755 320 LPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV-QKDPIRAATW-DPTCTRLVLC 394 (419)
Q Consensus 320 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~-~~~~v~~~~~-s~~~~~l~s~ 394 (419)
....+..-.+++.++|++.++.... +.|.+++.+ |+++..+. ....+++++| -++.+.|...
T Consensus 180 ----------~~~~g~pDG~~vD~~G~l~va~~~~--~~I~~~~p~-G~~~~~i~~p~~~~t~~~fgg~~~~~L~vT 243 (246)
T PF08450_consen 180 ----------PGGPGYPDGLAVDSDGNLWVADWGG--GRIVVFDPD-GKLLREIELPVPRPTNCAFGGPDGKTLYVT 243 (246)
T ss_dssp ----------SSSSCEEEEEEEBTTS-EEEEEETT--TEEEEEETT-SCEEEEEE-SSSSEEEEEEESTTSSEEEEE
T ss_pred ----------CCCCcCCCcceEcCCCCEEEEEcCC--CEEEEECCC-ccEEEEEcCCCCCEEEEEEECCCCCEEEEE
Confidence 0011224568999999988877666 999999987 88777665 3468999999 4676655443
No 285
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=99.34 E-value=1.4e-09 Score=84.74 Aligned_cols=265 Identities=8% Similarity=-0.039 Sum_probs=163.5
Q ss_pred CeEEEEEccCCc-ceeeeecCCccEeEEEECC-----CCCEEEEEecCCCeEEEEEcCCCeEEE--eccCCCCee---eE
Q 014755 70 LMIQAWSLTQPE-WTCKIDEGLAGIAYARWSP-----DSRHILTTSDFQLRLTVWSLLNTACVH--VQSPKHASK---GV 138 (419)
Q Consensus 70 g~i~iw~~~~~~-~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~~~~~i~iwd~~~~~~~~--~~~~~~~~~---~~ 138 (419)
..+.+|++.+.. .+..+. ..+.|.| ..-+|+.++..+ ...+|...+.+... ...+...|. ..
T Consensus 52 ~sv~i~~~y~N~~~iv~~y------~g~~F~p~s~~~kc~~la~gG~~g-~fd~~~~~tn~~h~~~cd~snn~v~~~~r~ 124 (344)
T KOG4532|consen 52 ISVPINSHYSNPKGIVEFY------TGMTFTPGSFINKCVTLADGGASG-QFDLFACNTNDGHLYQCDVSNNDVTLVKRY 124 (344)
T ss_pred eeeEeccccCCchhhEEee------ecccccchHhhccccEEEeccccc-eeeeecccCcccceeeecccccchhhhhhh
Confidence 467788876553 111221 3344544 345677777766 99999998755433 233333331 11
Q ss_pred EEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC--CCceEEEE
Q 014755 139 AFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP--DGRCLLKY 216 (419)
Q Consensus 139 ~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~--~~~~~~~~ 216 (419)
+-+ ...+..++.| .+++++++..+..........-.+.++.+++|++++++ .+....|..|.+ +++.+..+
T Consensus 125 cd~--~~~~~i~snd---ht~k~~~~~~~s~~~~~h~~~~~~ns~~~snd~~~~~~--Vgds~~Vf~y~id~~sey~~~~ 197 (344)
T KOG4532|consen 125 CDL--KFPLNIASND---HTGKTMVVSGDSNKFAVHNQNLTQNSLHYSNDPSWGSS--VGDSRRVFRYAIDDESEYIENI 197 (344)
T ss_pred ccc--ccceeeccCC---cceeEEEEecCcccceeeccccceeeeEEcCCCceEEE--ecCCCcceEEEeCCccceeeee
Confidence 111 1233444444 56777766544333332222234788999999999998 455678888887 44444443
Q ss_pred eecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccc
Q 014755 217 QAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFI 296 (419)
Q Consensus 217 ~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (419)
........-.+..|+.....+|++..||++.|||++.........
T Consensus 198 ~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~----------------------------------- 242 (344)
T KOG4532|consen 198 YEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEI----------------------------------- 242 (344)
T ss_pred EecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhhh-----------------------------------
Confidence 322222356678899999999999999999999987643222111
Q ss_pred cccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCe--EEEEecCCCCceEEEeeccCCCceeec-
Q 014755 297 QGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQ--YICTRNDSMPTTLWIWDICRQEPAAIL- 373 (419)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~--~l~~~~~d~~~~i~iwd~~~~~~~~~~- 373 (419)
..+.+.|.+.+..+.|++.|. +|...-.- +.+.+.|++++.-.+.+
T Consensus 243 -----------------------------sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhf--s~~hv~D~R~~~~~q~I~ 291 (344)
T KOG4532|consen 243 -----------------------------SSTRPHHNGAFRVCRFSLYGLLDLLFISEHF--SRVHVVDTRNYVNHQVIV 291 (344)
T ss_pred -----------------------------cccCCCCCCceEEEEecCCCcceEEEEecCc--ceEEEEEcccCceeeEEe
Confidence 111345889999999998764 34444333 88999999987644333
Q ss_pred -------ccCC-CeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEEecCC
Q 014755 374 -------VQKD-PIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCVSNPL 415 (419)
Q Consensus 374 -------~~~~-~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~ 415 (419)
.|.. .|..-.|+.++..+.+.+++ .+.=|++......-.|.
T Consensus 292 i~~d~~~~~~tq~ifgt~f~~~n~s~~v~~e~-~~ae~ni~srsR~~fps 340 (344)
T KOG4532|consen 292 IPDDVERKHNTQHIFGTNFNNENESNDVKNEL-QGAEYNILSRSRFSFPS 340 (344)
T ss_pred cCccccccccccccccccccCCCcccccccch-hhheeeccccceeccCC
Confidence 2333 48888999888877766654 46677777665555543
No 286
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=99.33 E-value=1.3e-10 Score=93.51 Aligned_cols=248 Identities=10% Similarity=0.190 Sum_probs=168.5
Q ss_pred cceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcC-CCeEEE--eccCCCCeeeEEEccCCCEEEEEeecCCCC
Q 014755 81 EWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLL-NTACVH--VQSPKHASKGVAFTQDGKFAAICTRRDCKD 157 (419)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~-~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g 157 (419)
.+...+.++.+.++....-|...-+++.+.|. ++++|--+ .++... ....+.+++++.+.++...|+++-.. |
T Consensus 15 ~ll~~~eG~~d~vn~~~l~~~e~gv~~~s~dr-tvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~n---g 90 (404)
T KOG1409|consen 15 ELLSKIEGSQDDVNAAILIPKEEGVISVSEDR-TVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDN---G 90 (404)
T ss_pred hhhhhhcCchhhhhhheeccCCCCeEEccccc-eeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEec---c
Confidence 34566778888888888888888899999998 99999654 455444 33455677999999999889888775 7
Q ss_pred eEEEEecc----CCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC--CCceEEEEeecCCCCceeEEEEc
Q 014755 158 YINLLSCH----TWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP--DGRCLLKYQAYESGLGVKSISWS 231 (419)
Q Consensus 158 ~v~i~d~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~--~~~~~~~~~~~~~~~~v~~~~~s 231 (419)
++.-+.+. .....+....|...+..+.|+-....+++ .+.|..+ .|.. .+..+..+.... ..+++.+.
T Consensus 91 tvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s--~~~dk~~-~~hc~e~~~~lg~Y~~~~---~~t~~~~d 164 (404)
T KOG1409|consen 91 TVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLS--TGKDKQF-AWHCTESGNRLGGYNFET---PASALQFD 164 (404)
T ss_pred eEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEE--eccccce-EEEeeccCCcccceEeec---cCCCCcee
Confidence 88877653 34456667778888999999888777776 3434332 2322 333222211110 11111111
Q ss_pred cCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEE
Q 014755 232 PCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRY 311 (419)
Q Consensus 232 ~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (419)
-. +...|...|.|..-.+...
T Consensus 165 ~~--~~fvGd~~gqvt~lr~~~~--------------------------------------------------------- 185 (404)
T KOG1409|consen 165 AL--YAFVGDHSGQITMLKLEQN--------------------------------------------------------- 185 (404)
T ss_pred eE--EEEecccccceEEEEEeec---------------------------------------------------------
Confidence 11 2333333344333222110
Q ss_pred EeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCc--eeecccCCCeeEEEeCCCCC
Q 014755 312 EVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEP--AAILVQKDPIRAATWDPTCT 389 (419)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~--~~~~~~~~~v~~~~~s~~~~ 389 (419)
...+...+.+|.+.+.+++|.|..+.|.+|..| ..+.+||+...+- ....+|...|..+..-+--+
T Consensus 186 ----------~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d--~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~ 253 (404)
T KOG1409|consen 186 ----------GCQLITTFNGHTGEVTCLKWDPGQRLLFSGASD--HSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTR 253 (404)
T ss_pred ----------CCceEEEEcCcccceEEEEEcCCCcEEEecccc--CceEEEeccCCcceeeeeccchhhhhhhhhhhhhe
Confidence 111222244689999999999999999999999 9999999976554 45557999999999988889
Q ss_pred eEEEEeCCCcEEEeecCCCe
Q 014755 390 RLVLCTGSSHLYMWTPSGAY 409 (419)
Q Consensus 390 ~l~s~~~dg~i~vw~~~~~~ 409 (419)
.|.+++.||.|.+|+++-..
T Consensus 254 ~l~S~~edg~i~~w~mn~~r 273 (404)
T KOG1409|consen 254 QLISCGEDGGIVVWNMNVKR 273 (404)
T ss_pred eeeeccCCCeEEEEecccee
Confidence 99999999999999998443
No 287
>KOG1064 consensus RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily [General function prediction only]
Probab=99.31 E-value=2.5e-11 Score=117.07 Aligned_cols=165 Identities=12% Similarity=0.111 Sum_probs=127.7
Q ss_pred cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE--eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEecc
Q 014755 88 EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH--VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCH 165 (419)
Q Consensus 88 ~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~ 165 (419)
.+-..|.++.-+|...+.++++.|+ .+++|....++.+. .......++.+.|+.+|+.+..+..| |.+.+|...
T Consensus 2206 ~~v~~v~r~~sHp~~~~Yltgs~dg-sv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~d---g~l~l~q~~ 2281 (2439)
T KOG1064|consen 2206 HPVENVRRMTSHPSDPYYLTGSQDG-SVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGD---GDLSLWQAS 2281 (2439)
T ss_pred cccCceeeecCCCCCceEEecCCCc-eEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccC---CceeecccC
Confidence 3445688888899999999999988 99999998877665 33344778999999999988888766 899999987
Q ss_pred CCeEEEEEeccccceeeeeECCCCCeEEEEcC-CCCceEEEEcC--CCceEEEEeecCCCCceeEEEEccCCCeEEEEEe
Q 014755 166 TWEIMGVFAVDTLDLADIEWSPDDSAIVIWDS-PLEYKVLIYSP--DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSY 242 (419)
Q Consensus 166 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~~~i~~~d~--~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 242 (419)
.++....+.|+.....+.|-. ..++.... ..++.+.+||. .+..-..-..|.+ .++++++-|..+.|++|+.
T Consensus 2282 -pk~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~--gaT~l~~~P~~qllisggr 2356 (2439)
T KOG1064|consen 2282 -PKPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDG--GATVLAYAPKHQLLISGGR 2356 (2439)
T ss_pred -CcceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceeeeecCC--CceEEEEcCcceEEEecCC
Confidence 566667778888888888765 44444322 33578999998 3322222256655 8999999999999999999
Q ss_pred cCcEEEEEcCCceeeeeec
Q 014755 243 DQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 243 d~~i~v~d~~~~~~~~~~~ 261 (419)
+|.|++||++..+....++
T Consensus 2357 ~G~v~l~D~rqrql~h~~~ 2375 (2439)
T KOG1064|consen 2357 KGEVCLFDIRQRQLRHTFQ 2375 (2439)
T ss_pred cCcEEEeehHHHHHHHHhh
Confidence 9999999998877766653
No 288
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=99.31 E-value=9.9e-09 Score=83.91 Aligned_cols=213 Identities=13% Similarity=0.076 Sum_probs=145.0
Q ss_pred cceeEEEEec-CCCeEEEEeccCCeEEEEEccCCcceeeeecCCcc--EeEEEECCCCCEEEEEecC----CCeEEEEEc
Q 014755 48 DKISYIEWAL-DSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAG--IAYARWSPDSRHILTTSDF----QLRLTVWSL 120 (419)
Q Consensus 48 ~~v~~~~~s~-~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~~----~~~i~iwd~ 120 (419)
.....++.+| .+..++++-...-...+||..+++....+....+. --.-.||+||++|++.-.+ .|.|-|||.
T Consensus 5 ~RgH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~ 84 (305)
T PF07433_consen 5 ARGHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDA 84 (305)
T ss_pred ccccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEEC
Confidence 4556788999 55566666655336789999999988777655443 2256899999999987432 358999999
Q ss_pred CCCeE-EE-eccCCCCeeeEEEccCCCEEEEEeec---------------CCCCeEEEEeccCCeEEEEEec----cccc
Q 014755 121 LNTAC-VH-VQSPKHASKGVAFTQDGKFAAICTRR---------------DCKDYINLLSCHTWEIMGVFAV----DTLD 179 (419)
Q Consensus 121 ~~~~~-~~-~~~~~~~~~~~~~~~~~~~l~~~~~~---------------~~~g~v~i~d~~~~~~~~~~~~----~~~~ 179 (419)
..+-. +. +..+.-....+.+.|||+.|+++... ...-.+.+.|..+|+.+.+... |...
T Consensus 85 ~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lS 164 (305)
T PF07433_consen 85 ARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLS 164 (305)
T ss_pred cCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccc
Confidence 94333 22 55565566899999999888887532 1123566778888988877433 6678
Q ss_pred eeeeeECCCCCeEEEEcCCCC-----ceEEEEcCCCceEEEEeecC-----CCCceeEEEEccCCCeEEEEE-ecCcEEE
Q 014755 180 LADIEWSPDDSAIVIWDSPLE-----YKVLIYSPDGRCLLKYQAYE-----SGLGVKSISWSPCGQFLAVGS-YDQTLRV 248 (419)
Q Consensus 180 v~~~~~~~~~~~l~~~~~~~~-----~~i~~~d~~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~~~~-~d~~i~v 248 (419)
++.+++.++|..++-..-..+ --+.+++..+ .+..+.... -...+-+|++++++..+++.+ ..+.+.+
T Consensus 165 iRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g~-~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~ 243 (305)
T PF07433_consen 165 IRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRGG-ALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAV 243 (305)
T ss_pred eeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCCC-cceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEE
Confidence 999999999987764222111 2244444322 233332211 113799999999998886665 4578999
Q ss_pred EEcCCceeeeeec
Q 014755 249 LNHLTWKTFAEFM 261 (419)
Q Consensus 249 ~d~~~~~~~~~~~ 261 (419)
||..+++.+....
T Consensus 244 ~d~~tg~~~~~~~ 256 (305)
T PF07433_consen 244 WDAATGRLLGSVP 256 (305)
T ss_pred EECCCCCEeeccc
Confidence 9999998877653
No 289
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=99.26 E-value=1.7e-09 Score=94.95 Aligned_cols=181 Identities=18% Similarity=0.165 Sum_probs=129.1
Q ss_pred eEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEec--CC-CeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEE
Q 014755 71 MIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSD--FQ-LRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFA 147 (419)
Q Consensus 71 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--~~-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l 147 (419)
.+.+-|.+ +.....+......+...+|+|+++.++...- .+ ..+.++++++++...+..........+|+|||+.+
T Consensus 174 ~l~~~D~d-g~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g~~~~P~fspDG~~l 252 (425)
T COG0823 174 ELALGDYD-GYNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNGNNGAPAFSPDGSKL 252 (425)
T ss_pred eEEEEccC-CcceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCCccCCccCCCCCCEE
Confidence 55555554 5555666666677888999999999877642 12 26999999998877755556666788999999999
Q ss_pred EEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcC-CCCceEEEEcCCCceEEEEeecCCCCcee
Q 014755 148 AICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDS-PLEYKVLIYSPDGRCLLKYQAYESGLGVK 226 (419)
Q Consensus 148 ~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~v~ 226 (419)
+.+...++.-.|+++|+.+++..+ +....+.-..-.|+|||+.++..+. ...-.|+++++++.....+..... .-.
T Consensus 253 ~f~~~rdg~~~iy~~dl~~~~~~~-Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~riT~~~~--~~~ 329 (425)
T COG0823 253 AFSSSRDGSPDIYLMDLDGKNLPR-LTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRLTFSGG--GNS 329 (425)
T ss_pred EEEECCCCCccEEEEcCCCCccee-cccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEeeccCC--CCc
Confidence 998877655689999999877444 5544444558899999999987432 222468888887776666665544 233
Q ss_pred EEEEccCCCeEEEEEec-Cc--EEEEEcCCce
Q 014755 227 SISWSPCGQFLAVGSYD-QT--LRVLNHLTWK 255 (419)
Q Consensus 227 ~~~~s~~~~~l~~~~~d-~~--i~v~d~~~~~ 255 (419)
...|+|||++|+..+.. |. |.+.|+.++.
T Consensus 330 ~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~ 361 (425)
T COG0823 330 NPVWSPDGDKIVFESSSGGQWDIDKNDLASGG 361 (425)
T ss_pred CccCCCCCCEEEEEeccCCceeeEEeccCCCC
Confidence 78899999999887743 33 5556655544
No 290
>KOG0309 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.24 E-value=2.1e-10 Score=101.59 Aligned_cols=198 Identities=14% Similarity=0.214 Sum_probs=140.3
Q ss_pred ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCc--cEeEEEECCCC---CEEEEEecCCCeEEEEE
Q 014755 45 SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLA--GIAYARWSPDS---RHILTTSDFQLRLTVWS 119 (419)
Q Consensus 45 ~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~--~v~~~~~~~~~---~~l~~~~~~~~~i~iwd 119 (419)
.-.+++..+..+|-|+-+|.++.. -+.+.|+...-.......|.. .|....|+|.. ..+++.+.. .-.+|+
T Consensus 22 ~v~~~~~a~si~p~grdi~lAsr~--gl~i~dld~p~~ppr~l~h~tpw~vad~qws~h~a~~~wiVsts~q--kaiiwn 97 (1081)
T KOG0309|consen 22 KVDGGFNAVSINPSGRDIVLASRQ--GLYIIDLDDPFTPPRWLHHITPWQVADVQWSPHPAKPYWIVSTSNQ--KAIIWN 97 (1081)
T ss_pred EecCcccceeeccccchhhhhhhc--CeEEEeccCCCCCceeeeccCcchhcceecccCCCCceeEEecCcc--hhhhhh
Confidence 345678899999999999999865 377888875532223333332 37778888853 345555544 456898
Q ss_pred cCC--CeEEE--eccCCCCeeeEEEccCC-CEEEEEeecCCCCeEEEEeccCC-eEEEEEeccccceeeeeECCCCCeEE
Q 014755 120 LLN--TACVH--VQSPKHASKGVAFTQDG-KFAAICTRRDCKDYINLLSCHTW-EIMGVFAVDTLDLADIEWSPDDSAIV 193 (419)
Q Consensus 120 ~~~--~~~~~--~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~g~v~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~ 193 (419)
+.. ...+. +.+|...++.+.|+|.. ..+++++.| -.+..||+++. .++.....-......++|+-....+.
T Consensus 98 lA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvd---t~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vl 174 (1081)
T KOG0309|consen 98 LAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVD---TYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVL 174 (1081)
T ss_pred hhcCCccceEEEEecCccceeccccCCCCCcceeecccc---ccceeeeccCCCcceeeeecccccCceeeecccCcchh
Confidence 864 23333 67888889999999877 567777776 68999999884 34555555556677888887655555
Q ss_pred EEcCCCCceEEEEcC--CCceEEEEeecCCCCceeEEEEccC-CCeEEEEEecCcEEEEEcCC
Q 014755 194 IWDSPLEYKVLIYSP--DGRCLLKYQAYESGLGVKSISWSPC-GQFLAVGSYDQTLRVLNHLT 253 (419)
Q Consensus 194 ~~~~~~~~~i~~~d~--~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~d~~i~v~d~~~ 253 (419)
. .+..+.|.+||. .+.++..+..+.. .++.++|..- ...+.+.+.|++|+.||...
T Consensus 175 a--sshg~~i~vwd~r~gs~pl~s~K~~vs--~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~k 233 (1081)
T KOG0309|consen 175 A--SSHGNDIFVWDLRKGSTPLCSLKGHVS--SVNSIDFNRFKYSEIMSSSNDGTVKFWDYSK 233 (1081)
T ss_pred h--hccCCceEEEeccCCCcceEEecccce--eeehHHHhhhhhhhhcccCCCCceeeecccc
Confidence 4 455788999999 5677777777544 7888888753 34788999999999999764
No 291
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=99.24 E-value=1.2e-07 Score=80.20 Aligned_cols=226 Identities=15% Similarity=0.109 Sum_probs=119.5
Q ss_pred eEEcCCCCEEEEEeC----CeEEEEecCCCcEEEEeecC-cceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeee
Q 014755 13 SCFSPNARYIAVAVD----YRLVVRDAHSFKVVQLFSCL-DKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKID 87 (419)
Q Consensus 13 ~~~s~d~~~la~~~~----~~i~i~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~ 87 (419)
=+|.+||+.|+++++ ..+.+.|+.+++..++..+. .......++|+++.++..... ..|+-.|+++.+......
T Consensus 41 ~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~-~~l~~vdL~T~e~~~vy~ 119 (386)
T PF14583_consen 41 NCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNG-RSLRRVDLDTLEERVVYE 119 (386)
T ss_dssp --B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETT-TEEEEEETTT--EEEEEE
T ss_pred CCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECC-CeEEEEECCcCcEEEEEE
Confidence 368999998888873 35889999999999988754 334467788999998876544 489999999987655554
Q ss_pred cCCccEeEEEE--CCCCCEEEEEec---C------------------CCeEEEEEcCCCeEEEeccCCCCeeeEEEccCC
Q 014755 88 EGLAGIAYARW--SPDSRHILTTSD---F------------------QLRLTVWSLLNTACVHVQSPKHASKGVAFTQDG 144 (419)
Q Consensus 88 ~~~~~v~~~~~--~~~~~~l~~~~~---~------------------~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (419)
....-+-...| +.|+..++-.-. + ...|.-.|+.+|+...+......+..+.|+|..
T Consensus 120 ~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~~~~wlgH~~fsP~d 199 (386)
T PF14583_consen 120 VPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFEDTDWLGHVQFSPTD 199 (386)
T ss_dssp --TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEEESS-EEEEEEETTE
T ss_pred CCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEecCccccCcccCCCC
Confidence 44544444555 446666554321 1 124666788888887766677778899999976
Q ss_pred -CEEEEEeecCCCC-eEEEEeccC-CeEEEEEecc--ccceeeeeECCCCCeEEEE---cCCCCceEEEEcC-CCceEEE
Q 014755 145 -KFAAICTRRDCKD-YINLLSCHT-WEIMGVFAVD--TLDLADIEWSPDDSAIVIW---DSPLEYKVLIYSP-DGRCLLK 215 (419)
Q Consensus 145 -~~l~~~~~~~~~g-~v~i~d~~~-~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~---~~~~~~~i~~~d~-~~~~~~~ 215 (419)
..|+.|-+..-+. .-+||-+++ +...+.+..+ ...+..=-|.|||..|..- .+..+..|.-+|+ +++....
T Consensus 200 p~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~ 279 (386)
T PF14583_consen 200 PTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERRRL 279 (386)
T ss_dssp EEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TTT--EEEE
T ss_pred CCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCCCCCceEE
Confidence 4555555432111 125565543 3333333222 2334555689999987652 2233456777888 5544332
Q ss_pred EeecCCCCceeEEEEccCCCeEEEEEec
Q 014755 216 YQAYESGLGVKSISWSPCGQFLAVGSYD 243 (419)
Q Consensus 216 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d 243 (419)
... . ....+..++||++++-=+.|
T Consensus 280 ~~~-p---~~~H~~ss~Dg~L~vGDG~d 303 (386)
T PF14583_consen 280 MEM-P---WCSHFMSSPDGKLFVGDGGD 303 (386)
T ss_dssp EEE-----SEEEEEE-TTSSEEEEEE--
T ss_pred EeC-C---ceeeeEEcCCCCEEEecCCC
Confidence 222 1 35567778899887654444
No 292
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.24 E-value=1.1e-09 Score=87.24 Aligned_cols=292 Identities=12% Similarity=0.170 Sum_probs=169.5
Q ss_pred cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCc-----ceeeeecCC------------ccEeEEEECCCC--CEEE
Q 014755 46 CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPE-----WTCKIDEGL------------AGIAYARWSPDS--RHIL 106 (419)
Q Consensus 46 ~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~-----~~~~~~~~~------------~~v~~~~~~~~~--~~l~ 106 (419)
..+.|+++.|...|.+|++|... |.|.+|.-+... ....++.|. ..|..+.|..++ ..++
T Consensus 25 ead~ItaVefd~tg~YlatGDkg-GRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFL 103 (460)
T COG5170 25 EADKITAVEFDETGLYLATGDKG-GRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFL 103 (460)
T ss_pred ccceeeEEEeccccceEeecCCC-ceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEE
Confidence 45679999999999999999754 899999865432 122234443 347788887654 3455
Q ss_pred EEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC------CeEEEEE-eccccc
Q 014755 107 TTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT------WEIMGVF-AVDTLD 179 (419)
Q Consensus 107 ~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~------~~~~~~~-~~~~~~ 179 (419)
..+.+. +|++|.+........... .-..++.+...|. +.+. ..+++=.+.. ..+.+.+ ..|...
T Consensus 104 lstNdk-tiKlWKiyeknlk~va~n-nls~~~~~~~~g~-~~s~------~~l~lprls~hd~iiaa~p~rvyaNaH~yh 174 (460)
T COG5170 104 LSTNDK-TIKLWKIYEKNLKVVAEN-NLSDSFHSPMGGP-LTST------KELLLPRLSEHDEIIAAKPCRVYANAHPYH 174 (460)
T ss_pred EecCCc-eeeeeeeecccchhhhcc-ccccccccccCCC-cCCH------HHhhcccccccceEEEeccceeccccceeE
Confidence 666677 999999876533221100 0000011100110 0000 0011100000 0111112 457778
Q ss_pred eeeeeECCCCCeEEEEcCCCCceEEEEcC--CCceEEE--EeecCC---CCceeEEEEccCC-CeEEEEEecCcEEEEEc
Q 014755 180 LADIEWSPDDSAIVIWDSPLEYKVLIYSP--DGRCLLK--YQAYES---GLGVKSISWSPCG-QFLAVGSYDQTLRVLNH 251 (419)
Q Consensus 180 v~~~~~~~~~~~l~~~~~~~~~~i~~~d~--~~~~~~~--~~~~~~---~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~ 251 (419)
+.++.|+.|.+.++. ..+-.|.+|++ ....... +.++.- ..-|++..|+|.. ..+...+..|.|++-|+
T Consensus 175 iNSiS~NsD~et~lS---aDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~Dl 251 (460)
T COG5170 175 INSISFNSDKETLLS---ADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDL 251 (460)
T ss_pred eeeeeecCchheeee---ccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhh
Confidence 999999999998886 34788999998 2222222 222221 1257889999964 56777788899999998
Q ss_pred CCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCC
Q 014755 252 LTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPN 331 (419)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (419)
+.......-. ..|.....+.. ..-+.+
T Consensus 252 Rq~alcdn~~-----------klfe~~~D~v~------------------------------------------~~ff~e 278 (460)
T COG5170 252 RQSALCDNSK-----------KLFELTIDGVD------------------------------------------VDFFEE 278 (460)
T ss_pred hhhhhccCch-----------hhhhhccCccc------------------------------------------chhHHH
Confidence 7432111000 00000000000 000011
Q ss_pred CCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCC-ceeecc-c------------CCCee---EEEeCCCCCeEEEE
Q 014755 332 PKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQE-PAAILV-Q------------KDPIR---AATWDPTCTRLVLC 394 (419)
Q Consensus 332 ~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~-~~~~~~-~------------~~~v~---~~~~s~~~~~l~s~ 394 (419)
-...|..+.|+++|+++++-+. .+++|||.+..+ ++.+.. | ...|. .+.||-|.+.+.+|
T Consensus 279 ivsSISD~kFs~ngryIlsRdy---ltvkiwDvnm~k~pikTi~~h~~l~~~l~d~YEnDaifdkFeisfSgd~~~v~sg 355 (460)
T COG5170 279 IVSSISDFKFSDNGRYILSRDY---LTVKIWDVNMAKNPIKTIPMHCDLMDELNDVYENDAIFDKFEISFSGDDKHVLSG 355 (460)
T ss_pred HhhhhcceEEcCCCcEEEEecc---ceEEEEecccccCCceeechHHHHHHHHHhhhhccceeeeEEEEecCCccccccc
Confidence 2334788999999999999887 799999987643 333331 2 23343 57899999999999
Q ss_pred eCCCcEEEeecC
Q 014755 395 TGSSHLYMWTPS 406 (419)
Q Consensus 395 ~~dg~i~vw~~~ 406 (419)
+.....-+|-..
T Consensus 356 sy~NNfgiyp~~ 367 (460)
T COG5170 356 SYSNNFGIYPTD 367 (460)
T ss_pred ccccceeeeccc
Confidence 988888888643
No 293
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=99.23 E-value=1e-07 Score=80.54 Aligned_cols=220 Identities=18% Similarity=0.101 Sum_probs=112.3
Q ss_pred ecCCCcEEEEeecC------cceeEEEEecCCCeEEEEeccCC--eEEEEEccCCcceeeeecCC-ccEeEEEECCCCCE
Q 014755 34 DAHSFKVVQLFSCL------DKISYIEWALDSEYILCGLYKRL--MIQAWSLTQPEWTCKIDEGL-AGIAYARWSPDSRH 104 (419)
Q Consensus 34 ~~~~~~~~~~~~~~------~~v~~~~~s~~~~~l~~~~~~~g--~i~iw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~ 104 (419)
|..||..+..+... ---+.=+|.+||+.|+.++..+| .+.+.|+++++.. +++.+. .......++|+++.
T Consensus 16 D~~TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~-QLTdg~g~~~~g~~~s~~~~~ 94 (386)
T PF14583_consen 16 DPDTGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEIT-QLTDGPGDNTFGGFLSPDDRA 94 (386)
T ss_dssp -TTT--EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEE-E---SS-B-TTT-EE-TTSSE
T ss_pred CCCCCceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccCCCcceEEEEcccCEEE-ECccCCCCCccceEEecCCCe
Confidence 66777665544322 22233467889998888775333 6788888888754 555443 22335667899998
Q ss_pred EEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEE--ccCCCEEEEEeec-------------------CCCCeEEEE
Q 014755 105 ILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAF--TQDGKFAAICTRR-------------------DCKDYINLL 162 (419)
Q Consensus 105 l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~--~~~~~~l~~~~~~-------------------~~~g~v~i~ 162 (419)
++...... .|.-.|+++.+... ...+..-+-...| +.|+..++..... .....|...
T Consensus 95 ~~Yv~~~~-~l~~vdL~T~e~~~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~i 173 (386)
T PF14583_consen 95 LYYVKNGR-SLRRVDLDTLEERVVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTI 173 (386)
T ss_dssp EEEEETTT-EEEEEETTT--EEEEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEE
T ss_pred EEEEECCC-eEEEEECCcCcEEEEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEE
Confidence 88776555 89999999987765 4444444434555 4456655443221 111256667
Q ss_pred eccCCeEEEEEeccccceeeeeECCCCCeEEEEcCC-----CCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeE
Q 014755 163 SCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSP-----LEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFL 237 (419)
Q Consensus 163 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-----~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 237 (419)
|+.+|+....+. ....+..+.|+|....++.+.-. -+..|.+.+.+|...+.+..+.....+..=-|.|||..|
T Consensus 174 dl~tG~~~~v~~-~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~i 252 (386)
T PF14583_consen 174 DLKTGERKVVFE-DTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGSTI 252 (386)
T ss_dssp ETTT--EEEEEE-ESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS-E
T ss_pred ECCCCceeEEEe-cCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCCCCEE
Confidence 888877655554 35677889999987766653111 134566666677766666555444456677799999877
Q ss_pred EEEEe-----cCcEEEEEcCCcee
Q 014755 238 AVGSY-----DQTLRVLNHLTWKT 256 (419)
Q Consensus 238 ~~~~~-----d~~i~v~d~~~~~~ 256 (419)
..-+. +..|.-+|+.+++.
T Consensus 253 ~y~~~~~~~~~~~i~~~d~~t~~~ 276 (386)
T PF14583_consen 253 WYDSYTPGGQDFWIAGYDPDTGER 276 (386)
T ss_dssp EEEEEETTT--EEEEEE-TTT--E
T ss_pred EEEeecCCCCceEEEeeCCCCCCc
Confidence 66433 33566667666544
No 294
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=99.21 E-value=2.1e-08 Score=79.52 Aligned_cols=226 Identities=15% Similarity=0.150 Sum_probs=126.5
Q ss_pred EEEECCCCCEEEEEecCCCeEEEEEcCC------CeEEEeccCCCC-eeeEEEccCCCEEEEEeecCCCCeEEEEeccCC
Q 014755 95 YARWSPDSRHILTTSDFQLRLTVWSLLN------TACVHVQSPKHA-SKGVAFTQDGKFAAICTRRDCKDYINLLSCHTW 167 (419)
Q Consensus 95 ~~~~~~~~~~l~~~~~~~~~i~iwd~~~------~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~ 167 (419)
.++.+.+|+.||..-+ . .|.+-..++ +++. +...+.+ -+.++||||+..||.+... |+|+++|+...
T Consensus 2 ~~~~~~~Gk~lAi~qd-~-~iEiRsa~Ddf~si~~kcq-VpkD~~PQWRkl~WSpD~tlLa~a~S~---G~i~vfdl~g~ 75 (282)
T PF15492_consen 2 HLALSSDGKLLAILQD-Q-CIEIRSAKDDFSSIIGKCQ-VPKDPNPQWRKLAWSPDCTLLAYAEST---GTIRVFDLMGS 75 (282)
T ss_pred ceeecCCCcEEEEEec-c-EEEEEeccCCchheeEEEe-cCCCCCchheEEEECCCCcEEEEEcCC---CeEEEEecccc
Confidence 3567889998887754 3 666665554 2222 2222222 3899999999999999875 89999999853
Q ss_pred eEEEEEecc-------ccceeeeeECCCC------CeEEEEcCCCCceEEEEcC------CCceEEEEeecCC-CCceeE
Q 014755 168 EIMGVFAVD-------TLDLADIEWSPDD------SAIVIWDSPLEYKVLIYSP------DGRCLLKYQAYES-GLGVKS 227 (419)
Q Consensus 168 ~~~~~~~~~-------~~~v~~~~~~~~~------~~l~~~~~~~~~~i~~~d~------~~~~~~~~~~~~~-~~~v~~ 227 (419)
+ +..+... ...|..+.|.+-. ..|++ ..-.|.++-|-+ ..+..+.+....+ ...|.+
T Consensus 76 ~-lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlv--i~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~ 152 (282)
T PF15492_consen 76 E-LFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLV--INYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINS 152 (282)
T ss_pred e-eEEcCcccccCCccccceeeeEeeccccccccceeEEE--EeccceeeeEEEEcccCCcceeeEEEEecccCCCceeE
Confidence 3 3333321 2345566664432 12333 233555555543 1223333333211 237999
Q ss_pred EEEccCCCeEEEEEecC-----------cEEEEEcCCceeeeeec--ccccccCCCccceeccCCCcccccceeeeccCc
Q 014755 228 ISWSPCGQFLAVGSYDQ-----------TLRVLNHLTWKTFAEFM--HLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDD 294 (419)
Q Consensus 228 ~~~s~~~~~l~~~~~d~-----------~i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (419)
+.++|..++|+.|+... -+..|.+-++.+..... .+..+...
T Consensus 153 ~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~------------------------- 207 (282)
T PF15492_consen 153 AVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITAS------------------------- 207 (282)
T ss_pred EEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCcccccc-------------------------
Confidence 99999988888776421 24455554444322211 00111000
Q ss_pred cccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec
Q 014755 295 FIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL 373 (419)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~ 373 (419)
. .....+.+. ..+...........|..|..||||+.||+...+ |.|.+|++.+-++....
T Consensus 208 ------~----~~~~~~~~~-------~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~s--G~lsLW~iPsL~~~~~W 267 (282)
T PF15492_consen 208 ------S----KRRGLLRIP-------SFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFS--GSLSLWEIPSLRLQRSW 267 (282)
T ss_pred ------c----cccceeecc-------ceeeeeccccCCCceEEEEECCCCCEEEEEEcC--CeEEEEecCcchhhccc
Confidence 0 000000000 000000011245679999999999999999988 99999999886655443
No 295
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=99.21 E-value=9.6e-09 Score=80.25 Aligned_cols=226 Identities=7% Similarity=-0.082 Sum_probs=144.6
Q ss_pred CEEEEEe-CCeEEEEecCCCcEEEEe--ecCcceeEEEEecC-CCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeE
Q 014755 20 RYIAVAV-DYRLVVRDAHSFKVVQLF--SCLDKISYIEWALD-SEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAY 95 (419)
Q Consensus 20 ~~la~~~-~~~i~i~~~~~~~~~~~~--~~~~~v~~~~~s~~-~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~ 95 (419)
.+||.|+ .+...+|...+.+....+ .|...|+-+.=..| .-.+..++.| .++++.+++.+.....+....-.+.+
T Consensus 85 ~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~snd-ht~k~~~~~~~s~~~~~h~~~~~~ns 163 (344)
T KOG4532|consen 85 VTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASND-HTGKTMVVSGDSNKFAVHNQNLTQNS 163 (344)
T ss_pred cEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCC-cceeEEEEecCcccceeeccccceee
Confidence 5777775 788999998876644332 13332222211111 1234445545 68899888766544333222233789
Q ss_pred EEECCCCCEEEEEecCCCeEEEEEcCCCeEE--E--eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEE-
Q 014755 96 ARWSPDSRHILTTSDFQLRLTVWSLLNTACV--H--VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIM- 170 (419)
Q Consensus 96 ~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~--~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~- 170 (419)
+..++|++++++.++.. .|..|.+...... . .......-.+..|+.....+|++..| |++.|||++.....
T Consensus 164 ~~~snd~~~~~~Vgds~-~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qd---g~~~I~DVR~~~tpm 239 (344)
T KOG4532|consen 164 LHYSNDPSWGSSVGDSR-RVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQD---GTCAIYDVRNMATPM 239 (344)
T ss_pred eEEcCCCceEEEecCCC-cceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecC---CcEEEEEecccccch
Confidence 99999999999998877 8999988763222 2 33344455889999999999999998 89999999874322
Q ss_pred ----EEEeccccceeeeeECCCCCe--EEEEcCCCCceEEEEcC-CCceEEEEeecCCC------CceeEEEEccCCCeE
Q 014755 171 ----GVFAVDTLDLADIEWSPDDSA--IVIWDSPLEYKVLIYSP-DGRCLLKYQAYESG------LGVKSISWSPCGQFL 237 (419)
Q Consensus 171 ----~~~~~~~~~v~~~~~~~~~~~--l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~------~~v~~~~~s~~~~~l 237 (419)
.+-..|.+.++.+.|++.|.. |++ ...-+.+.+.|+ ++...+.+...... ..+..-.|+.++..+
T Consensus 240 ~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~--sEhfs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~ 317 (344)
T KOG4532|consen 240 AEISSTRPHHNGAFRVCRFSLYGLLDLLFI--SEHFSRVHVVDTRNYVNHQVIVIPDDVERKHNTQHIFGTNFNNENESN 317 (344)
T ss_pred hhhcccCCCCCCceEEEEecCCCcceEEEE--ecCcceEEEEEcccCceeeEEecCccccccccccccccccccCCCccc
Confidence 223447889999999987653 333 344578889998 66555544433221 236666677766666
Q ss_pred EEEEecCcEEEEEcCC
Q 014755 238 AVGSYDQTLRVLNHLT 253 (419)
Q Consensus 238 ~~~~~d~~i~v~d~~~ 253 (419)
.+.+++ .+.-|++.+
T Consensus 318 ~v~~e~-~~ae~ni~s 332 (344)
T KOG4532|consen 318 DVKNEL-QGAEYNILS 332 (344)
T ss_pred ccccch-hhheeeccc
Confidence 555544 344555543
No 296
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=99.20 E-value=4.8e-10 Score=92.29 Aligned_cols=79 Identities=14% Similarity=0.131 Sum_probs=67.4
Q ss_pred CCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceee--cccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCC
Q 014755 331 NPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAI--LVQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGA 408 (419)
Q Consensus 331 ~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~ 408 (419)
+|-..++++++|||+++++++..| ..|+|-....--.+.. +||..-|..++.-++ ..|+|+|.|+++++||+.+|
T Consensus 149 GhvSml~dVavS~D~~~IitaDRD--EkIRvs~ypa~f~IesfclGH~eFVS~isl~~~-~~LlS~sGD~tlr~Wd~~sg 225 (390)
T KOG3914|consen 149 GHVSMLLDVAVSPDDQFIITADRD--EKIRVSRYPATFVIESFCLGHKEFVSTISLTDN-YLLLSGSGDKTLRLWDITSG 225 (390)
T ss_pred hhhhhhheeeecCCCCEEEEecCC--ceEEEEecCcccchhhhccccHhheeeeeeccC-ceeeecCCCCcEEEEecccC
Confidence 577889999999999999999999 9999988776555533 379999999998765 45899999999999999988
Q ss_pred eEEe
Q 014755 409 YCVS 412 (419)
Q Consensus 409 ~~~~ 412 (419)
+++.
T Consensus 226 k~L~ 229 (390)
T KOG3914|consen 226 KLLD 229 (390)
T ss_pred Cccc
Confidence 7663
No 297
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=99.18 E-value=8e-08 Score=85.58 Aligned_cols=296 Identities=10% Similarity=-0.006 Sum_probs=167.8
Q ss_pred CCEEEEEe-CCeEEEEecCCCcEEEEeecCcc--ee------EEEEec--CCCeEEEEeccCCeEEEEEccCCcceeeee
Q 014755 19 ARYIAVAV-DYRLVVRDAHSFKVVQLFSCLDK--IS------YIEWAL--DSEYILCGLYKRLMIQAWSLTQPEWTCKID 87 (419)
Q Consensus 19 ~~~la~~~-~~~i~i~~~~~~~~~~~~~~~~~--v~------~~~~s~--~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~ 87 (419)
+..+++++ ++.+.-+|.++|+.+-....... .. .+.-.| ++..+++++.+ |.+..+|.++|+.+.+..
T Consensus 69 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~~~~-g~l~ald~~tG~~~W~~~ 147 (394)
T PRK11138 69 YNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIGSEK-GQVYALNAEDGEVAWQTK 147 (394)
T ss_pred CCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCEEEEEcCC-CEEEEEECCCCCCccccc
Confidence 34555554 77889999999987765442210 00 000111 34566677655 899999999998776654
Q ss_pred cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCC-----eeeEEEccCCCEEEEEeecCCCCeEEE
Q 014755 88 EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHA-----SKGVAFTQDGKFAAICTRRDCKDYINL 161 (419)
Q Consensus 88 ~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~g~v~i 161 (419)
........... .+..++++..++ .+..+|.++|+.+. ....... ....... +..++++..+ |.+..
T Consensus 148 ~~~~~~ssP~v--~~~~v~v~~~~g-~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~--~~~v~~~~~~---g~v~a 219 (394)
T PRK11138 148 VAGEALSRPVV--SDGLVLVHTSNG-MLQALNESDGAVKWTVNLDVPSLTLRGESAPATA--FGGAIVGGDN---GRVSA 219 (394)
T ss_pred CCCceecCCEE--ECCEEEEECCCC-EEEEEEccCCCEeeeecCCCCcccccCCCCCEEE--CCEEEEEcCC---CEEEE
Confidence 33221111112 234566666665 89999999998776 3221110 0111111 2345555544 78999
Q ss_pred EeccCCeEEEEEecccc-------ceeeeeECC--CCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEc
Q 014755 162 LSCHTWEIMGVFAVDTL-------DLADIEWSP--DDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWS 231 (419)
Q Consensus 162 ~d~~~~~~~~~~~~~~~-------~v~~~~~~~--~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s 231 (419)
+|..+++.+-....... ....+.-+| .+..+++ ...++.++.+|. +|+.+-..... ....+..
T Consensus 220 ~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~--~~~~g~l~ald~~tG~~~W~~~~~----~~~~~~~- 292 (394)
T PRK11138 220 VLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYA--LAYNGNLVALDLRSGQIVWKREYG----SVNDFAV- 292 (394)
T ss_pred EEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEE--EEcCCeEEEEECCCCCEEEeecCC----CccCcEE-
Confidence 99988876544322110 001111122 2344554 345789999999 78766544321 1222222
Q ss_pred cCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEE
Q 014755 232 PCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRY 311 (419)
Q Consensus 232 ~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (419)
.+..++.++.++.+..+|..+|+.+-......
T Consensus 293 -~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~----------------------------------------------- 324 (394)
T PRK11138 293 -DGGRIYLVDQNDRVYALDTRGGVELWSQSDLL----------------------------------------------- 324 (394)
T ss_pred -ECCEEEEEcCCCeEEEEECCCCcEEEcccccC-----------------------------------------------
Confidence 45677888889999999998887644321000
Q ss_pred EeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc-cCCCee-EEEeCCCCC
Q 014755 312 EVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV-QKDPIR-AATWDPTCT 389 (419)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~-~~~~v~-~~~~s~~~~ 389 (419)
+ ....+... .+.+++.++.+ |.|++.|..+|+.+.... ....+. ...+ .+.
T Consensus 325 --------------------~-~~~~sp~v--~~g~l~v~~~~--G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~--~~~ 377 (394)
T PRK11138 325 --------------------H-RLLTAPVL--YNGYLVVGDSE--GYLHWINREDGRFVAQQKVDSSGFLSEPVV--ADD 377 (394)
T ss_pred --------------------C-CcccCCEE--ECCEEEEEeCC--CEEEEEECCCCCEEEEEEcCCCcceeCCEE--ECC
Confidence 0 00011111 13456677777 999999999999876553 222232 2233 234
Q ss_pred eEEEEeCCCcEEEeec
Q 014755 390 RLVLCTGSSHLYMWTP 405 (419)
Q Consensus 390 ~l~s~~~dg~i~vw~~ 405 (419)
.|+.++.||.|+.+++
T Consensus 378 ~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 378 KLLIQARDGTVYAITR 393 (394)
T ss_pred EEEEEeCCceEEEEeC
Confidence 6777899999888764
No 298
>KOG1064 consensus RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily [General function prediction only]
Probab=99.15 E-value=3.8e-10 Score=109.28 Aligned_cols=197 Identities=10% Similarity=0.166 Sum_probs=156.6
Q ss_pred ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeee-cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCC
Q 014755 45 SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKID-EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNT 123 (419)
Q Consensus 45 ~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~ 123 (419)
.+-..|.++.=+|...+.++|+.| |.|++|....++.+.... .....|+.+.|+.+|..+..+..|+ .+.+|.+...
T Consensus 2206 ~~v~~v~r~~sHp~~~~Yltgs~d-gsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg-~l~l~q~~pk 2283 (2439)
T KOG1064|consen 2206 HPVENVRRMTSHPSDPYYLTGSQD-GSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDG-DLSLWQASPK 2283 (2439)
T ss_pred cccCceeeecCCCCCceEEecCCC-ceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCC-ceeecccCCc
Confidence 345678888889999999999987 999999998887665543 3347899999999999999888887 9999999844
Q ss_pred eEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC--Ce-EEEEEeccccceeeeeECCCCCeEEEEcCCCC
Q 014755 124 ACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT--WE-IMGVFAVDTLDLADIEWSPDDSAIVIWDSPLE 200 (419)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~--~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~ 200 (419)
-......|......+.|-. ..+++++....++.+.+||..- .. .+. ..|.+.++++++.|..+.++. ++.+
T Consensus 2284 ~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~--~~H~~gaT~l~~~P~~qllis--ggr~ 2357 (2439)
T KOG1064|consen 2284 PYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVH--TCHDGGATVLAYAPKHQLLIS--GGRK 2357 (2439)
T ss_pred ceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceee--eecCCCceEEEEcCcceEEEe--cCCc
Confidence 3333677777778888865 6777777666668999999753 22 233 789999999999999999988 8889
Q ss_pred ceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeec
Q 014755 201 YKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 201 ~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 261 (419)
|.|.+||+ ..+..+.++. ++ ...++++|+..|.++||++.....+..+.
T Consensus 2358 G~v~l~D~rqrql~h~~~~-----------~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~p 2407 (2439)
T KOG1064|consen 2358 GEVCLFDIRQRQLRHTFQA-----------LD-TREYFVTGSSEGNIKIWRLSEFGLLHTFP 2407 (2439)
T ss_pred CcEEEeehHHHHHHHHhhh-----------hh-hhheeeccCcccceEEEEccccchhhcCc
Confidence 99999999 6666555542 33 45689999999999999999887777775
No 299
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=99.14 E-value=1.5e-07 Score=78.03 Aligned_cols=277 Identities=14% Similarity=0.136 Sum_probs=163.2
Q ss_pred CeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEec----------CCCeEEEEEcCCCeEEE-eccCCC-----
Q 014755 70 LMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSD----------FQLRLTVWSLLNTACVH-VQSPKH----- 133 (419)
Q Consensus 70 g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------~~~~i~iwd~~~~~~~~-~~~~~~----- 133 (419)
+.+.++|.++++.+..+..... -.+..+|+++.++++.. .+ .|.+||..+-.+.. +..+..
T Consensus 17 ~rv~viD~d~~k~lGmi~~g~~--~~~~~spdgk~~y~a~T~~sR~~rG~RtD-vv~~~D~~TL~~~~EI~iP~k~R~~~ 93 (342)
T PF06433_consen 17 SRVYVIDADSGKLLGMIDTGFL--GNVALSPDGKTIYVAETFYSRGTRGERTD-VVEIWDTQTLSPTGEIEIPPKPRAQV 93 (342)
T ss_dssp EEEEEEETTTTEEEEEEEEESS--EEEEE-TTSSEEEEEEEEEEETTEEEEEE-EEEEEETTTTEEEEEEEETTS-B--B
T ss_pred ceEEEEECCCCcEEEEeecccC--CceeECCCCCEEEEEEEEEecccccccee-EEEEEecCcCcccceEecCCcchhee
Confidence 4799999999887766654433 34667999999987642 23 79999999976665 222221
Q ss_pred --CeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC--C
Q 014755 134 --ASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP--D 209 (419)
Q Consensus 134 --~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~--~ 209 (419)
....++++.|++++++...... -.|.+.|+..++.+..+.... +..+--+++..+..+ +.||.+....+ .
T Consensus 94 ~~~~~~~~ls~dgk~~~V~N~TPa-~SVtVVDl~~~kvv~ei~~PG--C~~iyP~~~~~F~~l---C~DGsl~~v~Ld~~ 167 (342)
T PF06433_consen 94 VPYKNMFALSADGKFLYVQNFTPA-TSVTVVDLAAKKVVGEIDTPG--CWLIYPSGNRGFSML---CGDGSLLTVTLDAD 167 (342)
T ss_dssp S--GGGEEE-TTSSEEEEEEESSS-EEEEEEETTTTEEEEEEEGTS--EEEEEEEETTEEEEE---ETTSCEEEEEETST
T ss_pred cccccceEEccCCcEEEEEccCCC-CeEEEEECCCCceeeeecCCC--EEEEEecCCCceEEE---ecCCceEEEEECCC
Confidence 1267899999999998765432 489999999999988876542 111211222233332 44777777666 6
Q ss_pred CceEEEEeec---CCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccC-CCccceeccCCCccccc
Q 014755 210 GRCLLKYQAY---ESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRG-PCFPAVFKEVDEPLQLD 285 (419)
Q Consensus 210 ~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 285 (419)
|+...+.... ........-+++..+..++.-+.+|.|+-.|+........- +..+.. ....-.|.
T Consensus 168 Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~--~~~~~t~~e~~~~Wr--------- 236 (342)
T PF06433_consen 168 GKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGK--PWSLLTDAEKADGWR--------- 236 (342)
T ss_dssp SSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEE--EEESS-HHHHHTTEE---------
T ss_pred CCEeEeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccC--cccccCccccccCcC---------
Confidence 6665333211 11112234455555666777888899988887654321110 000000 00000111
Q ss_pred ceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEec--------CCCCc
Q 014755 286 MSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRN--------DSMPT 357 (419)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~--------~d~~~ 357 (419)
.++-.-+++++....|+..- +|...
T Consensus 237 -----------------------------------------------PGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgt 269 (342)
T PF06433_consen 237 -----------------------------------------------PGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGT 269 (342)
T ss_dssp -----------------------------------------------E-SSS-EEEETTTTEEEEEEEE--TT-TTS-EE
T ss_pred -----------------------------------------------CcceeeeeeccccCeEEEEecCCCCCCccCCce
Confidence 01123356765443333321 11113
Q ss_pred eEEEeeccCCCceeecccCCCeeEEEeCCCCC-eEEEE-eCCCcEEEeecCCCeEEec
Q 014755 358 TLWIWDICRQEPAAILVQKDPIRAATWDPTCT-RLVLC-TGSSHLYMWTPSGAYCVSN 413 (419)
Q Consensus 358 ~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~-~~dg~i~vw~~~~~~~~~~ 413 (419)
.|.++|+.+++.+..+.-..++.+++.+.|.+ +|+.. ..++.+.+||..+|+++..
T Consensus 270 eVWv~D~~t~krv~Ri~l~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~ 327 (342)
T PF06433_consen 270 EVWVYDLKTHKRVARIPLEHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRS 327 (342)
T ss_dssp EEEEEETTTTEEEEEEEEEEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEE
T ss_pred EEEEEECCCCeEEEEEeCCCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEee
Confidence 58889999999888886566788999999888 55544 4578999999999887754
No 300
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=99.14 E-value=1.2e-07 Score=78.48 Aligned_cols=216 Identities=17% Similarity=0.032 Sum_probs=134.9
Q ss_pred CCeEEEEecCCCcEEEEeecCcceeEEE--EecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCE
Q 014755 27 DYRLVVRDAHSFKVVQLFSCLDKISYIE--WALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRH 104 (419)
Q Consensus 27 ~~~i~i~~~~~~~~~~~~~~~~~v~~~~--~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 104 (419)
++.|..||..+|+.+............. ..+++..+++++.+ +.+..||..+|+.+.+... ..++.... ...+..
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~l~~~d~~tG~~~W~~~~-~~~~~~~~-~~~~~~ 78 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVASGD-GNLYALDAKTGKVLWRFDL-PGPISGAP-VVDGGR 78 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEEETT-SEEEEEETTTSEEEEEEEC-SSCGGSGE-EEETTE
T ss_pred CCEEEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEEcCC-CEEEEEECCCCCEEEEeec-ccccccee-eecccc
Confidence 5789999999999888776432233333 34456677777655 8999999999988777654 22211111 224455
Q ss_pred EEEEecCCCeEEEEEcCCCeEEEe-ccCC---CC-eeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccc
Q 014755 105 ILTTSDFQLRLTVWSLLNTACVHV-QSPK---HA-SKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLD 179 (419)
Q Consensus 105 l~~~~~~~~~i~iwd~~~~~~~~~-~~~~---~~-~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~ 179 (419)
++++..++ .+..+|.++|+.... .... .. ........++..++++..+ +.|..+|+++|+.+-........
T Consensus 79 v~v~~~~~-~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~l~~~d~~tG~~~w~~~~~~~~ 154 (238)
T PF13360_consen 79 VYVGTSDG-SLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSS---GKLVALDPKTGKLLWKYPVGEPR 154 (238)
T ss_dssp EEEEETTS-EEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETC---SEEEEEETTTTEEEEEEESSTT-
T ss_pred ccccccee-eeEecccCCcceeeeeccccccccccccccCceEecCEEEEEecc---CcEEEEecCCCcEEEEeecCCCC
Confidence 66666666 999999999988763 2211 11 1222333347777777754 79999999999998877664322
Q ss_pred ----------e-eeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEE
Q 014755 180 ----------L-ADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLR 247 (419)
Q Consensus 180 ----------v-~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~ 247 (419)
+ ..+.+ .++ .+++ ...++.+..+|. +++.+. ..... .+... ...++..|+.++.++.|.
T Consensus 155 ~~~~~~~~~~~~~~~~~-~~~-~v~~--~~~~g~~~~~d~~tg~~~w--~~~~~--~~~~~-~~~~~~~l~~~~~~~~l~ 225 (238)
T PF13360_consen 155 GSSPISSFSDINGSPVI-SDG-RVYV--SSGDGRVVAVDLATGEKLW--SKPIS--GIYSL-PSVDGGTLYVTSSDGRLY 225 (238)
T ss_dssp SS--EEEETTEEEEEEC-CTT-EEEE--ECCTSSEEEEETTTTEEEE--EECSS---ECEC-EECCCTEEEEEETTTEEE
T ss_pred CCcceeeecccccceEE-ECC-EEEE--EcCCCeEEEEECCCCCEEE--EecCC--CccCC-ceeeCCEEEEEeCCCEEE
Confidence 1 22222 244 5555 343554444488 666553 22222 23331 346677888888899999
Q ss_pred EEEcCCceeee
Q 014755 248 VLNHLTWKTFA 258 (419)
Q Consensus 248 v~d~~~~~~~~ 258 (419)
.||+++|+.+-
T Consensus 226 ~~d~~tG~~~W 236 (238)
T PF13360_consen 226 ALDLKTGKVVW 236 (238)
T ss_dssp EEETTTTEEEE
T ss_pred EEECCCCCEEe
Confidence 99999998764
No 301
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=99.13 E-value=1.3e-07 Score=82.66 Aligned_cols=227 Identities=19% Similarity=0.194 Sum_probs=142.0
Q ss_pred CeEEcCCCCEEEEEeCCeEEEEecCCCcEEEEee-c-----------------CcceeEEEEecCCCeEEEEeccCCe--
Q 014755 12 PSCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFS-C-----------------LDKISYIEWALDSEYILCGLYKRLM-- 71 (419)
Q Consensus 12 ~~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~-~-----------------~~~v~~~~~s~~~~~l~~~~~~~g~-- 71 (419)
...|||||+.||...++.|.+++..+++..++.. . -+.-..+-|||||++||+...|+..
T Consensus 47 ~~~~sP~g~~~~~v~~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~ 126 (353)
T PF00930_consen 47 DAKWSPDGKYIAFVRDNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVP 126 (353)
T ss_dssp EEEE-SSSTEEEEEETTEEEEESSTTSEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-
T ss_pred cceeecCCCeeEEEecCceEEEECCCCCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCc
Confidence 3789999999999999999999998886665432 1 1234678999999999988765433
Q ss_pred ---------------------------------EEEEEccCCccee-eee----cCCccEeEEEECCCCCEEEEE--ecC
Q 014755 72 ---------------------------------IQAWSLTQPEWTC-KID----EGLAGIAYARWSPDSRHILTT--SDF 111 (419)
Q Consensus 72 ---------------------------------i~iw~~~~~~~~~-~~~----~~~~~v~~~~~~~~~~~l~~~--~~~ 111 (419)
+.|+|+.+++... ... ....-+..+.|.++++.++.. ..+
T Consensus 127 ~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~ 206 (353)
T PF00930_consen 127 EYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRD 206 (353)
T ss_dssp EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETT
T ss_pred eEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccC
Confidence 3344444443321 111 123347889999999844443 232
Q ss_pred CC--eEEEEEcCCCeEEE--eccCCCCe---eeEEEc-cCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceee-
Q 014755 112 QL--RLTVWSLLNTACVH--VQSPKHAS---KGVAFT-QDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLAD- 182 (419)
Q Consensus 112 ~~--~i~iwd~~~~~~~~--~~~~~~~~---~~~~~~-~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~- 182 (419)
.. .+.+.|..++.... .......+ ....+. +++..++..+..++-..|++++...+.. +.+....-.|..
T Consensus 207 q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~~-~~lT~G~~~V~~i 285 (353)
T PF00930_consen 207 QNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGKP-RQLTSGDWEVTSI 285 (353)
T ss_dssp STEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSEE-EESS-SSS-EEEE
T ss_pred CCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEcccccce-eccccCceeeccc
Confidence 22 45666777655433 22222332 455654 7777776666655556888889887764 355555666744
Q ss_pred eeECCCCCeEEEEcCC---CCceEEEEcCC-CceEEEEeecCCCCceeEEEEccCCCeEEEEE
Q 014755 183 IEWSPDDSAIVIWDSP---LEYKVLIYSPD-GRCLLKYQAYESGLGVKSISWSPCGQFLAVGS 241 (419)
Q Consensus 183 ~~~~~~~~~l~~~~~~---~~~~i~~~d~~-~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 241 (419)
+.+.++++.+.+.... ....++..++. +..+..+...... -..+.|||++++++...
T Consensus 286 ~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~--~~~~~~Spdg~y~v~~~ 346 (353)
T PF00930_consen 286 LGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCEDGD--HYSASFSPDGKYYVDTY 346 (353)
T ss_dssp EEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTTSST--TEEEEE-TTSSEEEEEE
T ss_pred ceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCCCCC--ceEEEECCCCCEEEEEE
Confidence 7788888877653322 23567777777 7777777765542 25899999999877654
No 302
>PRK02888 nitrous-oxide reductase; Validated
Probab=99.12 E-value=1.1e-07 Score=85.34 Aligned_cols=202 Identities=13% Similarity=0.107 Sum_probs=123.6
Q ss_pred CCCEEEEEe--CCeEEEEecCCCcEEEEee--cCcceeEEEEe--cCCCeEEEEeccCCeEEEEEccCCcceeeeecCCc
Q 014755 18 NARYIAVAV--DYRLVVRDAHSFKVVQLFS--CLDKISYIEWA--LDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLA 91 (419)
Q Consensus 18 d~~~la~~~--~~~i~i~~~~~~~~~~~~~--~~~~v~~~~~s--~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~ 91 (419)
||+||..-. ..+|...++...++.+.+. ....++.++|- |+..++++++..
T Consensus 140 dGr~~findk~n~Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~----------------------- 196 (635)
T PRK02888 140 DGRYLFINDKANTRVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEF----------------------- 196 (635)
T ss_pred ceeEEEEecCCCcceEEEECccEeeceeEeCCCccCccccCccccCCccEEEeCccc-----------------------
Confidence 778877765 4456666666665555433 44556666665 566666555421
Q ss_pred cEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCC-CeEEEEeccCCeEE
Q 014755 92 GIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCK-DYINLLSCHTWEIM 170 (419)
Q Consensus 92 ~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-g~v~i~d~~~~~~~ 170 (419)
.+=+.|||+.+...+...+.+.+.|.++.+.............++++|+|+++++.+.+... .++...+......+
T Consensus 197 ---~~PlpnDGk~l~~~~ey~~~vSvID~etmeV~~qV~Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~ 273 (635)
T PRK02888 197 ---RIPLPNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMVDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWV 273 (635)
T ss_pred ---ccccCCCCCEeecccceeEEEEEEECccceEEEEEEeCCCcccceECCCCCEEEEeccCcccCcceeeeccccCceE
Confidence 11134566655544554557888888877665522233355788999999999988743211 34555554433322
Q ss_pred EEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-C----C-ceEEEEeecCCCCceeEEEEccCCCeEEEEEe-c
Q 014755 171 GVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-D----G-RCLLKYQAYESGLGVKSISWSPCGQFLAVGSY-D 243 (419)
Q Consensus 171 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~----~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d 243 (419)
..+.... .-++.++|++..+ . ++.|.+.|. + + +.+..+.... ....+.++|||+++++++. +
T Consensus 274 vvfni~~----iea~vkdGK~~~V--~--gn~V~VID~~t~~~~~~~v~~yIPVGK---sPHGV~vSPDGkylyVanklS 342 (635)
T PRK02888 274 VVFNIAR----IEEAVKAGKFKTI--G--GSKVPVVDGRKAANAGSALTRYVPVPK---NPHGVNTSPDGKYFIANGKLS 342 (635)
T ss_pred EEEchHH----HHHhhhCCCEEEE--C--CCEEEEEECCccccCCcceEEEEECCC---CccceEECCCCCEEEEeCCCC
Confidence 2222111 1134567887765 2 578999998 5 2 3444444333 6889999999998877764 7
Q ss_pred CcEEEEEcCCcee
Q 014755 244 QTLRVLNHLTWKT 256 (419)
Q Consensus 244 ~~i~v~d~~~~~~ 256 (419)
.+|.|+|+.+.+.
T Consensus 343 ~tVSVIDv~k~k~ 355 (635)
T PRK02888 343 PTVTVIDVRKLDD 355 (635)
T ss_pred CcEEEEEChhhhh
Confidence 8999999887543
No 303
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=99.11 E-value=2.1e-07 Score=76.91 Aligned_cols=227 Identities=13% Similarity=0.036 Sum_probs=134.4
Q ss_pred CeEEEEEcCCCeEEEeccCCCCeeeEE--EccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCC
Q 014755 113 LRLTVWSLLNTACVHVQSPKHASKGVA--FTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDS 190 (419)
Q Consensus 113 ~~i~iwd~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 190 (419)
+.|..||.++|+.+............. ..+++..+++++.+ +.++.||..+|+.+-..... ..+..... ..+.
T Consensus 3 g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~l~~~d~~tG~~~W~~~~~-~~~~~~~~-~~~~ 77 (238)
T PF13360_consen 3 GTLSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVASGD---GNLYALDAKTGKVLWRFDLP-GPISGAPV-VDGG 77 (238)
T ss_dssp SEEEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEEETT---SEEEEEETTTSEEEEEEECS-SCGGSGEE-EETT
T ss_pred CEEEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEEcCC---CEEEEEECCCCCEEEEeecc-ccccceee-eccc
Confidence 489999999988887332222232222 33456677777554 79999999999988777752 22222222 2344
Q ss_pred eEEEEcCCCCceEEEEcC-CCceEEEE-eecCCC-CceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeeccccccc
Q 014755 191 AIVIWDSPLEYKVLIYSP-DGRCLLKY-QAYESG-LGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVR 267 (419)
Q Consensus 191 ~l~~~~~~~~~~i~~~d~-~~~~~~~~-~~~~~~-~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 267 (419)
.+++ ...++.++.+|. +|+.+... ...... ..........++..++.+..++.|..+|+.+|+.+........-.
T Consensus 78 ~v~v--~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~ 155 (238)
T PF13360_consen 78 RVYV--GTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRG 155 (238)
T ss_dssp EEEE--EETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-S
T ss_pred cccc--ccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCC
Confidence 4444 234679999997 99988874 322111 012223333347788888889999999999999877765211000
Q ss_pred CCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeE
Q 014755 268 GPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQY 347 (419)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 347 (419)
...+. ....+..-....++ .
T Consensus 156 ----~~~~~-------------------------------------------------------~~~~~~~~~~~~~~-~ 175 (238)
T PF13360_consen 156 ----SSPIS-------------------------------------------------------SFSDINGSPVISDG-R 175 (238)
T ss_dssp ----S--EE-------------------------------------------------------EETTEEEEEECCTT-E
T ss_pred ----Cccee-------------------------------------------------------eecccccceEEECC-E
Confidence 00000 00001122222345 4
Q ss_pred EEEecCCCCce-EEEeeccCCCceeecccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEE
Q 014755 348 ICTRNDSMPTT-LWIWDICRQEPAAILVQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCV 411 (419)
Q Consensus 348 l~~~~~d~~~~-i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~ 411 (419)
++.++.+ +. +.+ |+.+++.+.... ...+..+ ...++..|+.++.++.+..||+++|+.+
T Consensus 176 v~~~~~~--g~~~~~-d~~tg~~~w~~~-~~~~~~~-~~~~~~~l~~~~~~~~l~~~d~~tG~~~ 235 (238)
T PF13360_consen 176 VYVSSGD--GRVVAV-DLATGEKLWSKP-ISGIYSL-PSVDGGTLYVTSSDGRLYALDLKTGKVV 235 (238)
T ss_dssp EEEECCT--SSEEEE-ETTTTEEEEEEC-SS-ECEC-EECCCTEEEEEETTTEEEEEETTTTEEE
T ss_pred EEEEcCC--CeEEEE-ECCCCCEEEEec-CCCccCC-ceeeCCEEEEEeCCCEEEEEECCCCCEE
Confidence 4455544 64 555 999998664222 2333332 3456777887879999999999999875
No 304
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.11 E-value=1.5e-06 Score=68.07 Aligned_cols=127 Identities=9% Similarity=-0.022 Sum_probs=86.2
Q ss_pred eEEcCCCCE-EEEEe-CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCC
Q 014755 13 SCFSPNARY-IAVAV-DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGL 90 (419)
Q Consensus 13 ~~~s~d~~~-la~~~-~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~ 90 (419)
+..-+|.+. ++.|+ .+.+.--|..+|+.....--...+.+-+.- -|++++.|+.. |.+++.+.++|+....+..-.
T Consensus 16 LVV~~dskT~v~igSHs~~~~avd~~sG~~~We~ilg~RiE~sa~v-vgdfVV~GCy~-g~lYfl~~~tGs~~w~f~~~~ 93 (354)
T KOG4649|consen 16 LVVCNDSKTLVVIGSHSGIVIAVDPQSGNLIWEAILGVRIECSAIV-VGDFVVLGCYS-GGLYFLCVKTGSQIWNFVILE 93 (354)
T ss_pred EEEecCCceEEEEecCCceEEEecCCCCcEEeehhhCceeeeeeEE-ECCEEEEEEcc-CcEEEEEecchhheeeeeehh
Confidence 555566554 44555 567788899999887655444555544433 47789999987 899999999997766654332
Q ss_pred ccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCe-eeEEEcc
Q 014755 91 AGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHAS-KGVAFTQ 142 (419)
Q Consensus 91 ~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~ 142 (419)
.-=......+++..+..++.|+ +.+..|.++..++....-.+.+ .+.++.|
T Consensus 94 ~vk~~a~~d~~~glIycgshd~-~~yalD~~~~~cVykskcgG~~f~sP~i~~ 145 (354)
T KOG4649|consen 94 TVKVRAQCDFDGGLIYCGSHDG-NFYALDPKTYGCVYKSKCGGGTFVSPVIAP 145 (354)
T ss_pred hhccceEEcCCCceEEEecCCC-cEEEecccccceEEecccCCceeccceecC
Confidence 2112334567888888888887 9999999998877733333333 5556666
No 305
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=99.11 E-value=1.6e-06 Score=72.20 Aligned_cols=267 Identities=15% Similarity=0.068 Sum_probs=154.8
Q ss_pred CeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEec----------cCCeEEEEEccCCcceeeeecCCc------
Q 014755 28 YRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLY----------KRLMIQAWSLTQPEWTCKIDEGLA------ 91 (419)
Q Consensus 28 ~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----------~~g~i~iw~~~~~~~~~~~~~~~~------ 91 (419)
+++.++|.++++.+-.+. .+-.-.+..|||++.++++.. .| .|.+||..+-.....+.-...
T Consensus 17 ~rv~viD~d~~k~lGmi~-~g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtD-vv~~~D~~TL~~~~EI~iP~k~R~~~~ 94 (342)
T PF06433_consen 17 SRVYVIDADSGKLLGMID-TGFLGNVALSPDGKTIYVAETFYSRGTRGERTD-VVEIWDTQTLSPTGEIEIPPKPRAQVV 94 (342)
T ss_dssp EEEEEEETTTTEEEEEEE-EESSEEEEE-TTSSEEEEEEEEEEETTEEEEEE-EEEEEETTTTEEEEEEEETTS-B--BS
T ss_pred ceEEEEECCCCcEEEEee-cccCCceeECCCCCEEEEEEEEEecccccccee-EEEEEecCcCcccceEecCCcchheec
Confidence 579999999998766554 233445778999999987542 22 799999998866654432211
Q ss_pred -cEeEEEECCCCCEEEEEec-CCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCC-CEEEEEeecCCCCeEEEEecc-CC
Q 014755 92 -GIAYARWSPDSRHILTTSD-FQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDG-KFAAICTRRDCKDYINLLSCH-TW 167 (419)
Q Consensus 92 -~v~~~~~~~~~~~l~~~~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~g~v~i~d~~-~~ 167 (419)
....++++.|++++++..- -...|.+.|+..++.+.....++ |...-|.+ +.+.+.+.| |.+.-..+. .|
T Consensus 95 ~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~PG---C~~iyP~~~~~F~~lC~D---Gsl~~v~Ld~~G 168 (342)
T PF06433_consen 95 PYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTPG---CWLIYPSGNRGFSMLCGD---GSLLTVTLDADG 168 (342)
T ss_dssp --GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGTS---EEEEEEEETTEEEEEETT---SCEEEEEETSTS
T ss_pred ccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCCC---EEEEEecCCCceEEEecC---CceEEEEECCCC
Confidence 1345688999999888742 22379999999998876222222 22222222 446666665 778777776 35
Q ss_pred eEEEEEe----ccccc-eeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCC-----------CCceeEEEEc
Q 014755 168 EIMGVFA----VDTLD-LADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYES-----------GLGVKSISWS 231 (419)
Q Consensus 168 ~~~~~~~----~~~~~-v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-----------~~~v~~~~~s 231 (419)
+..+... ....+ ...-++...+..+++ .+.+|.|+-.|+.+..........- .+.-.-++++
T Consensus 169 k~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F--~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~ 246 (342)
T PF06433_consen 169 KEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYF--VSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYH 246 (342)
T ss_dssp SEEEEEEEESSTTTS-B-S--EEETTTTEEEE--EBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEE
T ss_pred CEeEeeccccCCCCcccccccceECCCCeEEE--EecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeec
Confidence 5543221 11111 223334444444443 3568899998885544332221110 0123447777
Q ss_pred cCCCeEEEEEe---c-------CcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCcccccccc
Q 014755 232 PCGQFLAVGSY---D-------QTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSD 301 (419)
Q Consensus 232 ~~~~~l~~~~~---d-------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (419)
+..+.|++.-. + ..|.++|+.+++.+..+..+
T Consensus 247 ~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~-------------------------------------- 288 (342)
T PF06433_consen 247 AASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLE-------------------------------------- 288 (342)
T ss_dssp TTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEE--------------------------------------
T ss_pred cccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCC--------------------------------------
Confidence 65555444321 1 15888899998888877522
Q ss_pred ccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCe-EEEEe-cCCCCceEEEeeccCCCceeecccC
Q 014755 302 ATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQ-YICTR-NDSMPTTLWIWDICRQEPAAILVQK 376 (419)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~-~~d~~~~i~iwd~~~~~~~~~~~~~ 376 (419)
.++.+++.+.|.+ +|++. ..+ +.+.+||..+|+++..+..-
T Consensus 289 --------------------------------~~~~Si~Vsqd~~P~L~~~~~~~--~~l~v~D~~tGk~~~~~~~l 331 (342)
T PF06433_consen 289 --------------------------------HPIDSIAVSQDDKPLLYALSAGD--GTLDVYDAATGKLVRSIEQL 331 (342)
T ss_dssp --------------------------------EEESEEEEESSSS-EEEEEETTT--TEEEEEETTT--EEEEE---
T ss_pred --------------------------------CccceEEEccCCCcEEEEEcCCC--CeEEEEeCcCCcEEeehhcc
Confidence 1245788888765 55443 445 89999999999988877533
No 306
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=99.10 E-value=1.2e-09 Score=91.35 Aligned_cols=284 Identities=12% Similarity=0.066 Sum_probs=180.4
Q ss_pred eecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC---cceeeeecCCccEeEEEECCCCCEEEEEec-CCCeEEEEE
Q 014755 44 FSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP---EWTCKIDEGLAGIAYARWSPDSRHILTTSD-FQLRLTVWS 119 (419)
Q Consensus 44 ~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~~i~iwd 119 (419)
+-|.+.|+.+.-+ -.+++.+++.| |.++.|....- +.+..+..|...|.+++.+-++..+.+.+. |. .++++|
T Consensus 6 ymhrd~i~hv~~t-ka~fiiqASlD-Gh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dh-s~KvfD 82 (558)
T KOG0882|consen 6 YMHRDVITHVFPT-KAKFIIQASLD-GHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDH-SVKVFD 82 (558)
T ss_pred hcccceeeeEeee-hhheEEeeecc-hhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCccc-ceeEEE
Confidence 3477777776655 45688999987 89999986531 333445567788899999999998888777 66 999999
Q ss_pred cCCCeEEE---eccCCCCeeeEEEccCC--CEEEEEeecCCCCeEEEEeccCCe--EEEEEeccccceeeeeECCCCCeE
Q 014755 120 LLNTACVH---VQSPKHASKGVAFTQDG--KFAAICTRRDCKDYINLLSCHTWE--IMGVFAVDTLDLADIEWSPDDSAI 192 (419)
Q Consensus 120 ~~~~~~~~---~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~g~v~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l 192 (419)
+++-.... +...+..+ +...++.. ..+++...+ .+.+.++|-.... ....-..|..+|..+.++|-+..+
T Consensus 83 vEn~DminmiKL~~lPg~a-~wv~skGd~~s~IAVs~~~--sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~ 159 (558)
T KOG0882|consen 83 VENFDMINMIKLVDLPGFA-EWVTSKGDKISLIAVSLFK--SGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSA 159 (558)
T ss_pred eeccchhhhcccccCCCce-EEecCCCCeeeeEEeeccc--CCCcEEECCcCCcCccceecccccCceEEEEeeccccce
Confidence 98744432 22222222 11122221 245555554 4799999976533 333345578999999999999988
Q ss_pred EEEcCCCCceEEEEcCCCc--eEE-----EEe-------ecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeee
Q 014755 193 VIWDSPLEYKVLIYSPDGR--CLL-----KYQ-------AYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFA 258 (419)
Q Consensus 193 ~~~~~~~~~~i~~~d~~~~--~~~-----~~~-------~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~ 258 (419)
.+ ....|.|..|...+. ... .+. .........++.|+|+|..+.+-+.|..|++++..+|+.++
T Consensus 160 vS--iD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvq 237 (558)
T KOG0882|consen 160 VS--IDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQ 237 (558)
T ss_pred ee--ccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhh
Confidence 87 555789999998641 000 010 01112367899999999999999999999999999999988
Q ss_pred eecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCc-ceE
Q 014755 259 EFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQ-GIG 337 (419)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~ 337 (419)
.++...... .+.+ +..|.+.......+ ......++.|.. .-+
T Consensus 238 eiDE~~t~~------~~q~------------------------------ks~y~l~~VelgRR-maverelek~~~~~~~ 280 (558)
T KOG0882|consen 238 EIDEVLTDA------QYQP------------------------------KSPYGLMHVELGRR-MAVERELEKHGSTVGT 280 (558)
T ss_pred hhhccchhh------hhcc------------------------------ccccccceeehhhh-hhHHhhHhhhcCcccc
Confidence 876211110 0000 00000000000000 000001111221 235
Q ss_pred EEEEccCCeEEEEecCCCCceEEEeeccCCCceeeccc
Q 014755 338 LMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILVQ 375 (419)
Q Consensus 338 ~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~~ 375 (419)
.+.|...|++|+.++- =-|++.++.++++.+.+|.
T Consensus 281 ~~~fdes~~flly~t~---~gikvin~~tn~v~ri~gk 315 (558)
T KOG0882|consen 281 NAVFDESGNFLLYGTI---LGIKVINLDTNTVVRILGK 315 (558)
T ss_pred eeEEcCCCCEEEeecc---eeEEEEEeecCeEEEEecc
Confidence 6889999999999987 5699999999888777653
No 307
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.07 E-value=1.2e-09 Score=93.87 Aligned_cols=207 Identities=13% Similarity=0.153 Sum_probs=145.0
Q ss_pred EeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC-------cceeeeecCCccEeEEEECCCCCEEEEEecCCCeE
Q 014755 43 LFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP-------EWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRL 115 (419)
Q Consensus 43 ~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i 115 (419)
..+|...|..++--.+.+.+++++.| .+|++|.+... .+..+++.|+.+|.++.|-.+.++++++ |+ -|
T Consensus 731 f~GH~~~iRai~AidNENSFiSASkD-KTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~-gi 806 (1034)
T KOG4190|consen 731 FTGHQEKIRAIAAIDNENSFISASKD-KTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DG-GI 806 (1034)
T ss_pred ccCcHHHhHHHHhcccccceeeccCC-ceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cC-cc
Confidence 34688888888777778888999988 69999998632 3556678899999999999999888876 34 79
Q ss_pred EEEEcCCCeEEE-e-cc-CCCCeeeEEEccC--CCEEEEEeecCCCCeEEEEeccCCeEEEEEec-----cccceeeeeE
Q 014755 116 TVWSLLNTACVH-V-QS-PKHASKGVAFTQD--GKFAAICTRRDCKDYINLLSCHTWEIMGVFAV-----DTLDLADIEW 185 (419)
Q Consensus 116 ~iwd~~~~~~~~-~-~~-~~~~~~~~~~~~~--~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~-----~~~~v~~~~~ 185 (419)
.+||.--++.+. . .. ..+.+..+..-++ ...+..++.- ..+|+++|.+..+....++. .+.-+++++.
T Consensus 807 HlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsa--eSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaV 884 (1034)
T KOG4190|consen 807 HLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSA--ESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAV 884 (1034)
T ss_pred eeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccc--hhhheeeecccccceeeEEeccCCCCchheeEEEe
Confidence 999987776654 1 11 1222333333343 3334444222 26999999999877766654 3456889999
Q ss_pred CCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEE-EEcCCceeeeee
Q 014755 186 SPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRV-LNHLTWKTFAEF 260 (419)
Q Consensus 186 ~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v-~d~~~~~~~~~~ 260 (419)
.+.|+.++. +-+.|.|.+.|. +|+.+..+....- ....++ .|..+.++....|.++.| |...++....+.
T Consensus 885 a~~GN~lAa--~LSnGci~~LDaR~G~vINswrpmec--dllqla-apsdq~L~~saldHslaVnWhaldgimh~q~ 956 (1034)
T KOG4190|consen 885 ADKGNKLAA--ALSNGCIAILDARNGKVINSWRPMEC--DLLQLA-APSDQALAQSALDHSLAVNWHALDGIMHLQD 956 (1034)
T ss_pred ccCcchhhH--HhcCCcEEEEecCCCceeccCCcccc--hhhhhc-CchhHHHHhhcccceeEeeehhcCCeeeecc
Confidence 999999988 667899999999 8887776654332 233332 355667887778888888 876665544443
No 308
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only]
Probab=99.05 E-value=1.2e-08 Score=92.27 Aligned_cols=330 Identities=11% Similarity=0.052 Sum_probs=187.8
Q ss_pred hcccccCeEEcCCCCEEEEEe-----CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC
Q 014755 6 AYKQTGPSCFSPNARYIAVAV-----DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP 80 (419)
Q Consensus 6 ~~~~~~~~~~s~d~~~la~~~-----~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~ 80 (419)
..+-....+|+|...++|+++ .|.|.|| .++|++.+-..-.-.+++++|+|..-.|+.|-.. |.+.+|...+.
T Consensus 14 sdavsti~SWHPsePlfAVA~fS~er~GSVtIf-adtGEPqr~Vt~P~hatSLCWHpe~~vLa~gwe~-g~~~v~~~~~~ 91 (1416)
T KOG3617|consen 14 SDAVSTISSWHPSEPLFAVASFSPERGGSVTIF-ADTGEPQRDVTYPVHATSLCWHPEEFVLAQGWEM-GVSDVQKTNTT 91 (1416)
T ss_pred ccccccccccCCCCceeEEEEecCCCCceEEEE-ecCCCCCcccccceehhhhccChHHHHHhhcccc-ceeEEEecCCc
Confidence 334444478999999999986 4668888 4667755543334456789999988777777544 89999998887
Q ss_pred cceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC-CeEEE--eccCC--CCe--eeEEEccCCCE------E
Q 014755 81 EWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN-TACVH--VQSPK--HAS--KGVAFTQDGKF------A 147 (419)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~-~~~~~--~~~~~--~~~--~~~~~~~~~~~------l 147 (419)
+.......|+.+|..+.||++|..++++..-+ .+.+|.... |+... +..|. ..+ .+..+++++.- .
T Consensus 92 e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g-~v~lwr~d~~g~~q~~~~~~hel~~~ltl~cfRL~~~~Ee~~~laKa 170 (1416)
T KOG3617|consen 92 ETHTVVETHPAPIQGLDWSHDGTVLMTLDNPG-SVHLWRYDVIGEIQTSNIMQHELNDQLTLWCFRLSYDREEKFKLAKA 170 (1416)
T ss_pred eeeeeccCCCCCceeEEecCCCCeEEEcCCCc-eeEEEEeeeccccccchhhhhHhhceeeEEEEecCCChHHhhhhhhh
Confidence 77767778999999999999999999998877 999998774 33322 22221 122 45556776422 2
Q ss_pred EEEeecCCCCeEE-EEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCcee
Q 014755 148 AICTRRDCKDYIN-LLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVK 226 (419)
Q Consensus 148 ~~~~~~~~~g~v~-i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~ 226 (419)
++.+.+ ..+- .++.+.....+... + .=.|+|..+++ +..+|+|+..|-.|.......... -.
T Consensus 171 aVtgDe---~alD~~fnwk~~~a~rs~~-k-------sgv~~g~~F~~--~~~~GtVyyvdq~g~~~~V~k~dS----~v 233 (1416)
T KOG3617|consen 171 AVTGDE---SALDEPFNWKESLAERSDE-K-------SGVPKGTEFLF--AGKSGTVYYVDQNGRQRTVHKLDS----EV 233 (1416)
T ss_pred hccCch---hhhcccccCccchhhcccc-c-------cCCCCCcEEEE--EcCCceEEEEcCCCcEEEEEEccc----hH
Confidence 333332 1221 22222100001110 0 11367777766 677899999998777665554322 23
Q ss_pred EEEEccCCCeEEEEEecCcEEEEEcC-CceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCC
Q 014755 227 SISWSPCGQFLAVGSYDQTLRVLNHL-TWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNG 305 (419)
Q Consensus 227 ~~~~s~~~~~l~~~~~d~~i~v~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (419)
.+-|.+...-+...-.+-++.++-.. +|...... .+..+... .|+.. .++.+. ..|
T Consensus 234 QmLf~~~~eai~~i~e~lr~~l~~v~~~G~~ee~~-----------~vk~sgk~--GgrqG-giA~sE---------ssG 290 (1416)
T KOG3617|consen 234 QMLFMGYCEAISIIIEFLRDCLIFVLAKGTSEERC-----------AVKVSGKL--GGRQG-GIACSE---------SSG 290 (1416)
T ss_pred HHHHhcccceEEEEeeeceeeEEEecCCCchHHhh-----------hhhhcccc--CCccC-cccccc---------ccc
Confidence 45566655455544444444443322 22211110 01111000 00000 000000 000
Q ss_pred ceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCC----Cc---eeec----c
Q 014755 306 HIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQ----EP---AAIL----V 374 (419)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~----~~---~~~~----~ 374 (419)
+-...+...+ .....+++++++..+..|+.|... |.+.+|--... .+ ...+ .
T Consensus 291 --------------vLr~~eKyg~-e~ge~~~c~cY~~~~~~l~agt~~--gnv~~w~~v~~~f~g~p~~d~w~l~~~~e 353 (1416)
T KOG3617|consen 291 --------------VLRKSEKYGL-ELGEGILCMCYGEKEIRLWAGTKE--GNVTIWLDVNKGFQGDPTIDVWTLNGKRE 353 (1416)
T ss_pred --------------cccCCcchhh-hcCCceEEEEEeccceEEEecccC--CcEEEeeecCccccCCCCcceEEecCchh
Confidence 0000001111 134568999999999999999988 99999953322 11 1111 2
Q ss_pred cCCCeeEEEeCCCCCeEEEEe
Q 014755 375 QKDPIRAATWDPTCTRLVLCT 395 (419)
Q Consensus 375 ~~~~v~~~~~s~~~~~l~s~~ 395 (419)
-.+.|+.+.|.|--..++.-+
T Consensus 354 ~~g~I~~i~Wg~~k~~~avn~ 374 (1416)
T KOG3617|consen 354 SLGKISLIRWGPIKSTAAVNT 374 (1416)
T ss_pred hccceEEEEeccccchhhhhh
Confidence 456899999998665544433
No 309
>KOG0309 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.03 E-value=3.6e-09 Score=94.03 Aligned_cols=217 Identities=12% Similarity=0.149 Sum_probs=144.0
Q ss_pred ccCeEEcCCCCEEEEEeCCeEEEEecCC-CcEEEEeecCc--ceeEEEEecCC---CeEEEEeccCCeEEEEEccCC---
Q 014755 10 TGPSCFSPNARYIAVAVDYRLVVRDAHS-FKVVQLFSCLD--KISYIEWALDS---EYILCGLYKRLMIQAWSLTQP--- 80 (419)
Q Consensus 10 ~~~~~~s~d~~~la~~~~~~i~i~~~~~-~~~~~~~~~~~--~v~~~~~s~~~---~~l~~~~~~~g~i~iw~~~~~--- 80 (419)
.+.++++|.|+-+|.++.-.+.+.|+.. +.+-+.+.|.. .|-.+.|+|.. .++++.+ . ..-.+|++...
T Consensus 27 ~~a~si~p~grdi~lAsr~gl~i~dld~p~~ppr~l~h~tpw~vad~qws~h~a~~~wiVsts-~-qkaiiwnlA~ss~~ 104 (1081)
T KOG0309|consen 27 FNAVSINPSGRDIVLASRQGLYIIDLDDPFTPPRWLHHITPWQVADVQWSPHPAKPYWIVSTS-N-QKAIIWNLAKSSSN 104 (1081)
T ss_pred ccceeeccccchhhhhhhcCeEEEeccCCCCCceeeeccCcchhcceecccCCCCceeEEecC-c-chhhhhhhhcCCcc
Confidence 3448899999999999977788888764 44445555543 47788898843 2344444 3 46788998643
Q ss_pred cceeeeecCCccEeEEEECCCCC-EEEEEecCCCeEEEEEcCCCeEEE--eccCCCCeeeEEEccCCCEEEEEeecCCCC
Q 014755 81 EWTCKIDEGLAGIAYARWSPDSR-HILTTSDFQLRLTVWSLLNTACVH--VQSPKHASKGVAFTQDGKFAAICTRRDCKD 157 (419)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g 157 (419)
.....+.+|...|+.+.|.|... .+++++-+. .+..||+++..... ...-......+.|+-....+.+.+.. .
T Consensus 105 aIef~lhghsraitd~n~~~q~pdVlatcsvdt-~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg---~ 180 (1081)
T KOG0309|consen 105 AIEFVLHGHSRAITDINFNPQHPDVLATCSVDT-YVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHG---N 180 (1081)
T ss_pred ceEEEEecCccceeccccCCCCCcceeeccccc-cceeeeccCCCcceeeeecccccCceeeecccCcchhhhccC---C
Confidence 33445678899999999999665 567777777 99999999854333 33344455788887655444433332 5
Q ss_pred eEEEEeccCC-eEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCC--ceEEEEeecCCCCceeEEEEccCC
Q 014755 158 YINLLSCHTW-EIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDG--RCLLKYQAYESGLGVKSISWSPCG 234 (419)
Q Consensus 158 ~v~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~--~~~~~~~~~~~~~~v~~~~~s~~~ 234 (419)
.|.+||++.+ .++..+++|...++.++|..--... ++..+.|++|+.||.+. +......... .++..-.+-|-|
T Consensus 181 ~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~-~~s~~~d~tvkfw~y~kSt~e~~~~vtt~--~piw~~r~~Pfg 257 (1081)
T KOG0309|consen 181 DIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSE-IMSSSNDGTVKFWDYSKSTTESKRTVTTN--FPIWRGRYLPFG 257 (1081)
T ss_pred ceEEEeccCCCcceEEecccceeeehHHHhhhhhhh-hcccCCCCceeeecccccccccceecccc--CcceeccccccC
Confidence 8999999885 4667788888888888886532221 22367799999999822 2211111111 267777777755
Q ss_pred C
Q 014755 235 Q 235 (419)
Q Consensus 235 ~ 235 (419)
+
T Consensus 258 ~ 258 (1081)
T KOG0309|consen 258 E 258 (1081)
T ss_pred c
Confidence 4
No 310
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=99.01 E-value=1.2e-08 Score=84.32 Aligned_cols=157 Identities=14% Similarity=0.112 Sum_probs=113.3
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCC----CcEEEEeecCcceeEEEEecCCCeEEEEe--ccCCeEEEEEccCCcceee
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHS----FKVVQLFSCLDKISYIEWALDSEYILCGL--YKRLMIQAWSLTQPEWTCK 85 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~----~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~~~g~i~iw~~~~~~~~~~ 85 (419)
+..+|.+++||++. +....+++... .++.........-+++.|..+......+- .|...+.+|....+... .
T Consensus 68 ~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~~~-~ 146 (390)
T KOG3914|consen 68 VLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGRCE-P 146 (390)
T ss_pred cccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeecccccCcc-h
Confidence 56789999999996 55555555443 23444444455556677766655554443 23346666766655443 4
Q ss_pred eecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE--eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEe
Q 014755 86 IDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH--VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLS 163 (419)
Q Consensus 86 ~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d 163 (419)
+.+|-.-+..++|+||+++|+++..|. .|++-....--.+. ..+|+.-|..++.-++. .|++++.| ++|++||
T Consensus 147 ~lGhvSml~dVavS~D~~~IitaDRDE-kIRvs~ypa~f~IesfclGH~eFVS~isl~~~~-~LlS~sGD---~tlr~Wd 221 (390)
T KOG3914|consen 147 ILGHVSMLLDVAVSPDDQFIITADRDE-KIRVSRYPATFVIESFCLGHKEFVSTISLTDNY-LLLSGSGD---KTLRLWD 221 (390)
T ss_pred hhhhhhhhheeeecCCCCEEEEecCCc-eEEEEecCcccchhhhccccHhheeeeeeccCc-eeeecCCC---CcEEEEe
Confidence 568999999999999999999999998 99998887655554 56788889999987764 47788776 8999999
Q ss_pred ccCCeEEEEEec
Q 014755 164 CHTWEIMGVFAV 175 (419)
Q Consensus 164 ~~~~~~~~~~~~ 175 (419)
+++++.+..+..
T Consensus 222 ~~sgk~L~t~dl 233 (390)
T KOG3914|consen 222 ITSGKLLDTCDL 233 (390)
T ss_pred cccCCcccccch
Confidence 999998866543
No 311
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=99.00 E-value=1.5e-07 Score=74.67 Aligned_cols=196 Identities=14% Similarity=0.083 Sum_probs=124.1
Q ss_pred eeEEEEecCCCeEEEEeccCCeEEEEEccCCcce--eeeecCCccEeEEEECCCCCEE-EEEecCCCeEEEEEcCC-CeE
Q 014755 50 ISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWT--CKIDEGLAGIAYARWSPDSRHI-LTTSDFQLRLTVWSLLN-TAC 125 (419)
Q Consensus 50 v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l-~~~~~~~~~i~iwd~~~-~~~ 125 (419)
..++.|++.+..++++-.+ |.+.+-+....... +..+.|..+..-..|+.....| ++|++|+ .+..||++. ++.
T Consensus 124 ~lslD~~~~~~~i~vs~s~-G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~-~l~~~D~R~p~~~ 201 (339)
T KOG0280|consen 124 ALSLDISTSGTKIFVSDSR-GSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDG-SLSCWDIRIPKTF 201 (339)
T ss_pred eeEEEeeccCceEEEEcCC-CcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCc-eEEEEEecCCcce
Confidence 4678899999888887755 88886665555433 3678899999999998765544 5555555 999999993 433
Q ss_pred EE--eccCCCCeeeEEEccC-CCEEEEEeecCCCCeEEEEeccC-CeEEEEEeccccceeeeeECCCCCeEEEEcCCCCc
Q 014755 126 VH--VQSPKHASKGVAFTQD-GKFAAICTRRDCKDYINLLSCHT-WEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEY 201 (419)
Q Consensus 126 ~~--~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~g~v~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~ 201 (419)
+. ...|...|.++.-+|. +.+|++|+.| ..|++||.+. ++++..-.. .+.|..+.++|.-...+.. +..-+
T Consensus 202 i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYD---e~i~~~DtRnm~kPl~~~~v-~GGVWRi~~~p~~~~~lL~-~CMh~ 276 (339)
T KOG0280|consen 202 IWHNSKVHTSGVVSIYSSPPKPTYIATGSYD---ECIRVLDTRNMGKPLFKAKV-GGGVWRIKHHPEIFHRLLA-ACMHN 276 (339)
T ss_pred eeecceeeecceEEEecCCCCCceEEEeccc---cceeeeehhcccCccccCcc-ccceEEEEecchhhhHHHH-HHHhc
Confidence 33 4567778888887764 6789999997 6899999995 555544333 3778999998865422111 12223
Q ss_pred eEEEEcC---CCc---eEEEEeecCCCCceeEEEEccCCCeEEEEE-ecCcEE-EEEcCCc
Q 014755 202 KVLIYSP---DGR---CLLKYQAYESGLGVKSISWSPCGQFLAVGS-YDQTLR-VLNHLTW 254 (419)
Q Consensus 202 ~i~~~d~---~~~---~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~-v~d~~~~ 254 (419)
..++.+. ..+ .......|.. -+..-.|.....+|++++ .|+.++ +|-.-++
T Consensus 277 G~ki~~~~~~~~e~~~~~~s~~~hdS--l~YG~DWd~~~~~lATCsFYDk~~~~~Wl~~t~ 335 (339)
T KOG0280|consen 277 GAKILDSSDKVLEFQIVLPSDKIHDS--LCYGGDWDSKDSFLATCSFYDKKIRQLWLHITG 335 (339)
T ss_pred CceEEEecccccchheeeeccccccc--eeeccccccccceeeeeeccccceeeeeeeccC
Confidence 3344444 122 1112222222 344455544445688875 466644 7755444
No 312
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=99.00 E-value=7e-07 Score=84.43 Aligned_cols=195 Identities=17% Similarity=0.159 Sum_probs=111.4
Q ss_pred cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeE
Q 014755 46 CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTAC 125 (419)
Q Consensus 46 ~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~ 125 (419)
..+.|.++.|.-+...++.+... |.|.+-|.++.... ....-...|.+++|+||++.++.....+ ++.+-+ .+-.+
T Consensus 67 gd~~i~s~~fl~d~~~i~v~~~~-G~iilvd~et~~~e-ivg~vd~GI~aaswS~Dee~l~liT~~~-tll~mT-~~f~~ 142 (1265)
T KOG1920|consen 67 GDDEIVSVQFLADTNSICVITAL-GDIILVDPETLELE-IVGNVDNGISAASWSPDEELLALITGRQ-TLLFMT-KDFEP 142 (1265)
T ss_pred CCcceEEEEEecccceEEEEecC-CcEEEEccccccee-eeeeccCceEEEeecCCCcEEEEEeCCc-EEEEEe-ccccc
Confidence 34689999999999888888866 88999988876543 3444567899999999999999988765 554432 22111
Q ss_pred EE---e---ccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeE-EEEEeccccceeeeeECCCCCeEEEE--c
Q 014755 126 VH---V---QSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEI-MGVFAVDTLDLADIEWSPDDSAIVIW--D 196 (419)
Q Consensus 126 ~~---~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~--~ 196 (419)
+. + .........+-|-.....+= |+. |.....+....+. .... .....=..+.|--||+++++. .
T Consensus 143 i~E~~L~~d~~~~sk~v~VGwGrkeTqfr-gs~----gr~~~~~~~~~ek~~~~~-~~~~~~~~IsWRgDg~~fAVs~~~ 216 (1265)
T KOG1920|consen 143 IAEKPLDADDERKSKFVNVGWGRKETQFR-GSE----GRQAARQKIEKEKALEQI-EQDDHKTSISWRGDGEYFAVSFVE 216 (1265)
T ss_pred hhccccccccccccccceecccccceeee-cch----hhhcccccccccccccch-hhccCCceEEEccCCcEEEEEEEe
Confidence 11 1 00111112222222111111 110 1111111100000 0000 011233568999999998872 1
Q ss_pred CCCC-ceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEE---ecCcEEEEEcC
Q 014755 197 SPLE-YKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGS---YDQTLRVLNHL 252 (419)
Q Consensus 197 ~~~~-~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~---~d~~i~v~d~~ 252 (419)
...+ ..|++||..|.+-..-..... .-.+++|-|.|..+++-. .|+.|.+|.-+
T Consensus 217 ~~~~~RkirV~drEg~Lns~se~~~~--l~~~LsWkPsgs~iA~iq~~~sd~~IvffErN 274 (1265)
T KOG1920|consen 217 SETGTRKIRVYDREGALNSTSEPVEG--LQHSLSWKPSGSLIAAIQCKTSDSDIVFFERN 274 (1265)
T ss_pred ccCCceeEEEecccchhhcccCcccc--cccceeecCCCCeEeeeeecCCCCcEEEEecC
Confidence 2234 799999987544332222222 456899999999998864 35578888743
No 313
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.99 E-value=1.8e-09 Score=92.86 Aligned_cols=208 Identities=12% Similarity=0.124 Sum_probs=145.9
Q ss_pred eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC-------CeEEEEEeccccceeeeeECCCCCeEEEEcCCCC
Q 014755 128 VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT-------WEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLE 200 (419)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~ 200 (419)
+.+|...+..++--.+.+-+++++.| .+|++|.++. ..+..+++.|..+|..+.|-.+.++++. .|
T Consensus 731 f~GH~~~iRai~AidNENSFiSASkD---KTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~S----cD 803 (1034)
T KOG4190|consen 731 FTGHQEKIRAIAAIDNENSFISASKD---KTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIAS----CD 803 (1034)
T ss_pred ccCcHHHhHHHHhcccccceeeccCC---ceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeee----cc
Confidence 67788888777766667778888887 8999999875 2355567889999999999999988875 37
Q ss_pred ceEEEEcC-CCceEEEEeecCCCCceeEEEEcc--CCCeEEEE-EecCcEEEEEcCCceeeeeecccccccCCCccceec
Q 014755 201 YKVLIYSP-DGRCLLKYQAYESGLGVKSISWSP--CGQFLAVG-SYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFK 276 (419)
Q Consensus 201 ~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (419)
+.|.+||+ -|+.+..+......+.+..+.--| +...++.+ +...+|+++|.+.++-..+++...
T Consensus 804 ~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcn------------ 871 (1034)
T KOG4190|consen 804 GGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCN------------ 871 (1034)
T ss_pred CcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEecc------------
Confidence 88999999 777666443222222333333333 33444444 678899999998877665554110
Q ss_pred cCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCC
Q 014755 277 EVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMP 356 (419)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~ 356 (419)
.++....+.+++..+.|+++|++-..
T Consensus 872 ----------------------------------------------------a~~Pna~~R~iaVa~~GN~lAa~LSn-- 897 (1034)
T KOG4190|consen 872 ----------------------------------------------------APGPNALTRAIAVADKGNKLAAALSN-- 897 (1034)
T ss_pred ----------------------------------------------------CCCCchheeEEEeccCcchhhHHhcC--
Confidence 01233457899999999999999888
Q ss_pred ceEEEeeccCCCceeecc-cCCCeeEEEeCCCCCeEEEEeCCCcEEE-eecCCCe
Q 014755 357 TTLWIWDICRQEPAAILV-QKDPIRAATWDPTCTRLVLCTGSSHLYM-WTPSGAY 409 (419)
Q Consensus 357 ~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~v-w~~~~~~ 409 (419)
|.|.+.|.++|+++.... .......++ .|..+.|+....|.++.+ |....+.
T Consensus 898 Gci~~LDaR~G~vINswrpmecdllqla-apsdq~L~~saldHslaVnWhaldgi 951 (1034)
T KOG4190|consen 898 GCIAILDARNGKVINSWRPMECDLLQLA-APSDQALAQSALDHSLAVNWHALDGI 951 (1034)
T ss_pred CcEEEEecCCCceeccCCcccchhhhhc-CchhHHHHhhcccceeEeeehhcCCe
Confidence 999999999998775442 223333343 466677888888888888 8766443
No 314
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=98.98 E-value=1.1e-05 Score=71.14 Aligned_cols=287 Identities=12% Similarity=0.091 Sum_probs=189.2
Q ss_pred EEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEe
Q 014755 30 LVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTS 109 (419)
Q Consensus 30 i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 109 (419)
+.+++..+.+....+.-......+...|++..+.........+...+...................++.++.+..++...
T Consensus 13 ~~v~~~~~~~~~~~~~~~~~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~~n~~~~~~~~g~~~p~~i~v~~~~~~vyv~~ 92 (381)
T COG3391 13 VSVINTGTNKVTAAISLGRGPGGVAVNPDGTQVYVANSGSNDVSVIDATSNTVTQSLSVGGVYPAGVAVNPAGNKVYVTT 92 (381)
T ss_pred eEEEeecccEEEEEeecCCCCceeEEcCccCEEEEEeecCceeeecccccceeeeeccCCCccccceeeCCCCCeEEEec
Confidence 66777777666666654446778889999976665543323455555442211111111113356788899998777776
Q ss_pred cCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCC
Q 014755 110 DFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDD 189 (419)
Q Consensus 110 ~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~ 189 (419)
.+.+.|.+.|..+.+.............++++|+++.+.++......+.+.+.|..+.+..........+ ..+++.|+|
T Consensus 93 ~~~~~v~vid~~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P-~~~a~~p~g 171 (381)
T COG3391 93 GDSNTVSVIDTATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTP-TGVAVDPDG 171 (381)
T ss_pred CCCCeEEEEcCcccceeeEeeeccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCc-ceEEECCCC
Confidence 5545999999888777764444446789999999998888876322479999999998888885554444 899999999
Q ss_pred CeEEEEcCCCCceEEEEcCCCceEEEEee----cCCCCceeEEEEccCCCeEEEEEec---CcEEEEEcCCceeeeeecc
Q 014755 190 SAIVIWDSPLEYKVLIYSPDGRCLLKYQA----YESGLGVKSISWSPCGQFLAVGSYD---QTLRVLNHLTWKTFAEFMH 262 (419)
Q Consensus 190 ~~l~~~~~~~~~~i~~~d~~~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~~ 262 (419)
+.+.+.+ ..++.+.++|.++..+.. .. .........+.++|+|+++...... +.+...|..++.....-..
T Consensus 172 ~~vyv~~-~~~~~v~vi~~~~~~v~~-~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~ 249 (381)
T COG3391 172 NKVYVTN-SDDNTVSVIDTSGNSVVR-GSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLP 249 (381)
T ss_pred CeEEEEe-cCCCeEEEEeCCCcceec-cccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccc
Confidence 9988866 558999999985554443 11 1111246789999999976665443 5888888877665443110
Q ss_pred cccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEc
Q 014755 263 LSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWS 342 (419)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 342 (419)
.. .. ....+.++
T Consensus 250 ~~-------------------------------------------------------------------~~-~~~~v~~~ 261 (381)
T COG3391 250 VG-------------------------------------------------------------------SG-APRGVAVD 261 (381)
T ss_pred cc-------------------------------------------------------------------cC-CCCceeEC
Confidence 00 00 12357889
Q ss_pred cCCeEEEEecCCCCceEEEeeccCCCceeecc----cCCCeeEEEeCCCC
Q 014755 343 SDSQYICTRNDSMPTTLWIWDICRQEPAAILV----QKDPIRAATWDPTC 388 (419)
Q Consensus 343 ~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~----~~~~v~~~~~s~~~ 388 (419)
|+|+++...... .+.+.+.|..+.++..... -...+..+++.+..
T Consensus 262 p~g~~~yv~~~~-~~~V~vid~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 310 (381)
T COG3391 262 PAGKAAYVANSQ-GGTVSVIDGATDRVVKTGPTGNEALGEPVSIAISPLY 310 (381)
T ss_pred CCCCEEEEEecC-CCeEEEEeCCCCceeeeecccccccccceeccceeec
Confidence 999988877442 3889999988877766553 12235555555443
No 315
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=98.97 E-value=3.5e-08 Score=82.82 Aligned_cols=262 Identities=12% Similarity=0.011 Sum_probs=168.6
Q ss_pred CCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEE---E-eccCCCCeeeEEEccCCCEEEEEee-cCCCCeEEEEe
Q 014755 89 GLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACV---H-VQSPKHASKGVAFTQDGKFAAICTR-RDCKDYINLLS 163 (419)
Q Consensus 89 ~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~---~-~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~g~v~i~d 163 (419)
|...|+.+.- .-.+++.+++.|+ .++.|.-..-..+ . +..|-..+.+++.+-++..+.+.+. | ..++++|
T Consensus 8 hrd~i~hv~~-tka~fiiqASlDG-h~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~D---hs~KvfD 82 (558)
T KOG0882|consen 8 HRDVITHVFP-TKAKFIIQASLDG-HKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPD---HSVKVFD 82 (558)
T ss_pred ccceeeeEee-ehhheEEeeecch-hhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcc---cceeEEE
Confidence 5556665543 3567899999988 9999976542222 2 5566667789999999988888765 4 7899999
Q ss_pred ccCCeEEEEEeccc--cceeeeeECCC-CCeEEEEcCCCCceEEEEcC--CCceEEEEeecCCCCceeEEEEccCCCeEE
Q 014755 164 CHTWEIMGVFAVDT--LDLADIEWSPD-DSAIVIWDSPLEYKVLIYSP--DGRCLLKYQAYESGLGVKSISWSPCGQFLA 238 (419)
Q Consensus 164 ~~~~~~~~~~~~~~--~~v~~~~~~~~-~~~l~~~~~~~~~~i~~~d~--~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 238 (419)
+.+-..+..++... +.+..+ .+|. -..++..+...++.+.++|. +......+ ..-+..+|..+.+.|-+..++
T Consensus 83 vEn~DminmiKL~~lPg~a~wv-~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~f-kklH~sPV~~i~y~qa~Ds~v 160 (558)
T KOG0882|consen 83 VENFDMINMIKLVDLPGFAEWV-TSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYF-KKLHFSPVKKIRYNQAGDSAV 160 (558)
T ss_pred eeccchhhhcccccCCCceEEe-cCCCCeeeeEEeecccCCCcEEECCcCCcCcccee-cccccCceEEEEeecccccee
Confidence 88755443333221 222211 2222 11222333456789999998 33222222 222334899999999999999
Q ss_pred EEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCC
Q 014755 239 VGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPI 318 (419)
Q Consensus 239 ~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (419)
+....|.|.-|.... ..+. |...+.|....+
T Consensus 161 SiD~~gmVEyWs~e~--~~qf---------Pr~~l~~~~K~e-------------------------------------- 191 (558)
T KOG0882|consen 161 SIDISGMVEYWSAEG--PFQF---------PRTNLNFELKHE-------------------------------------- 191 (558)
T ss_pred eccccceeEeecCCC--cccC---------cccccccccccc--------------------------------------
Confidence 999999999999763 1111 111112211000
Q ss_pred CCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc------------------------
Q 014755 319 SLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV------------------------ 374 (419)
Q Consensus 319 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~------------------------ 374 (419)
.-+..++......+++.|+|+|..+++-+.| ..|++++..++++++.+.
T Consensus 192 -----TdLy~f~K~Kt~pts~Efsp~g~qistl~~D--rkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRR 264 (558)
T KOG0882|consen 192 -----TDLYGFPKAKTEPTSFEFSPDGAQISTLNPD--RKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRR 264 (558)
T ss_pred -----chhhcccccccCccceEEccccCcccccCcc--cEEEEEEeccchhhhhhhccchhhhhccccccccceeehhhh
Confidence 0001111234456889999999999999988 999999999887654321
Q ss_pred ---------cC-CCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEEecC
Q 014755 375 ---------QK-DPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCVSNP 414 (419)
Q Consensus 375 ---------~~-~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~ 414 (419)
|. ..-+.+.|...|++|+.++.=| |++.++.+++++++-
T Consensus 265 maverelek~~~~~~~~~~fdes~~flly~t~~g-ikvin~~tn~v~ri~ 313 (558)
T KOG0882|consen 265 MAVERELEKHGSTVGTNAVFDESGNFLLYGTILG-IKVINLDTNTVVRIL 313 (558)
T ss_pred hhHHhhHhhhcCcccceeEEcCCCCEEEeeccee-EEEEEeecCeEEEEe
Confidence 11 1235678889999999888755 899999999887753
No 316
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=98.96 E-value=4e-07 Score=81.16 Aligned_cols=265 Identities=9% Similarity=0.007 Sum_probs=151.1
Q ss_pred CCeEEEEeccCCeEEEEEccCCcceeeeecCCc-cEe------EEEECC--CCCEEEEEecCCCeEEEEEcCCCeEEEec
Q 014755 59 SEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLA-GIA------YARWSP--DSRHILTTSDFQLRLTVWSLLNTACVHVQ 129 (419)
Q Consensus 59 ~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~-~v~------~~~~~~--~~~~l~~~~~~~~~i~iwd~~~~~~~~~~ 129 (419)
+..+++++.+ |.+.-+|.++|+.+.+...... ... .+.-.| ++..++.++.++ .+..+|.++|+.+...
T Consensus 69 ~~~vy~~~~~-g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~~~~g-~l~ald~~tG~~~W~~ 146 (394)
T PRK11138 69 YNKVYAADRA-GLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIGSEKG-QVYALNAEDGEVAWQT 146 (394)
T ss_pred CCEEEEECCC-CeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCEEEEEcCCC-EEEEEECCCCCCcccc
Confidence 5566666655 7999999999987665432220 000 000011 345677776666 8999999998876632
Q ss_pred cCCCCe-eeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccce-----eeeeECCCCCeEEEEcCCCCceE
Q 014755 130 SPKHAS-KGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDL-----ADIEWSPDDSAIVIWDSPLEYKV 203 (419)
Q Consensus 130 ~~~~~~-~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~~~~~~~~~~i 203 (419)
.....+ ...... +..++++..+ +.++-+|.++|+.+-......... ..... .+..+++ ...++.+
T Consensus 147 ~~~~~~~ssP~v~--~~~v~v~~~~---g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v--~~~~v~~--~~~~g~v 217 (394)
T PRK11138 147 KVAGEALSRPVVS--DGLVLVHTSN---GMLQALNESDGAVKWTVNLDVPSLTLRGESAPAT--AFGGAIV--GGDNGRV 217 (394)
T ss_pred cCCCceecCCEEE--CCEEEEECCC---CEEEEEEccCCCEeeeecCCCCcccccCCCCCEE--ECCEEEE--EcCCCEE
Confidence 222222 122222 3455555544 789999999998876665421110 11111 1223444 4557888
Q ss_pred EEEcC-CCceEEEEeecCCC--Cc---eeEEEEcc--CCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCcccee
Q 014755 204 LIYSP-DGRCLLKYQAYESG--LG---VKSISWSP--CGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVF 275 (419)
Q Consensus 204 ~~~d~-~~~~~~~~~~~~~~--~~---v~~~~~s~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (419)
..+|. +|+.+......... .. ...+..+| .+..++.++.++.+..+|..+|+.+-......
T Consensus 218 ~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~----------- 286 (394)
T PRK11138 218 SAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKREYGS----------- 286 (394)
T ss_pred EEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeecCCC-----------
Confidence 88888 77765544321100 00 11111222 24567777788999999998887654432000
Q ss_pred ccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCC
Q 014755 276 KEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSM 355 (419)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~ 355 (419)
...+. .++..++.++.+
T Consensus 287 ------------------------------------------------------------~~~~~--~~~~~vy~~~~~- 303 (394)
T PRK11138 287 ------------------------------------------------------------VNDFA--VDGGRIYLVDQN- 303 (394)
T ss_pred ------------------------------------------------------------ccCcE--EECCEEEEEcCC-
Confidence 00111 234456666666
Q ss_pred CceEEEeeccCCCceeeccc--CCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEE
Q 014755 356 PTTLWIWDICRQEPAAILVQ--KDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCV 411 (419)
Q Consensus 356 ~~~i~iwd~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~ 411 (419)
+.++.+|..+++.+..... .....+... .+..|+.++.||.+.+.|..+|+.+
T Consensus 304 -g~l~ald~~tG~~~W~~~~~~~~~~~sp~v--~~g~l~v~~~~G~l~~ld~~tG~~~ 358 (394)
T PRK11138 304 -DRVYALDTRGGVELWSQSDLLHRLLTAPVL--YNGYLVVGDSEGYLHWINREDGRFV 358 (394)
T ss_pred -CeEEEEECCCCcEEEcccccCCCcccCCEE--ECCEEEEEeCCCEEEEEECCCCCEE
Confidence 8999999998876643321 111222222 2456777889999999999888765
No 317
>PRK02888 nitrous-oxide reductase; Validated
Probab=98.96 E-value=1.9e-07 Score=83.84 Aligned_cols=217 Identities=10% Similarity=0.098 Sum_probs=138.2
Q ss_pred eEEcCCCCEEEEEe--CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEecc---CCeEEEEEccCCcceeeee
Q 014755 13 SCFSPNARYIAVAV--DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYK---RLMIQAWSLTQPEWTCKID 87 (419)
Q Consensus 13 ~~~s~d~~~la~~~--~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~---~g~i~iw~~~~~~~~~~~~ 87 (419)
+=++|||+.+...+ .+.+.+.|.++.++.....-.+....++++|+|+++++.+.+ ..++...+..+......+.
T Consensus 198 ~PlpnDGk~l~~~~ey~~~vSvID~etmeV~~qV~Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfn 277 (635)
T PRK02888 198 IPLPNDGKDLDDPKKYRSLFTAVDAETMEVAWQVMVDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFN 277 (635)
T ss_pred cccCCCCCEeecccceeEEEEEEECccceEEEEEEeCCCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEc
Confidence 34788998776555 456888899998887766655567889999999999988743 1233333332222111111
Q ss_pred cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC-----CeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEE
Q 014755 88 EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN-----TACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLL 162 (419)
Q Consensus 88 ~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~ 162 (419)
. ..+ -++.++|++.... ++ .|.+.|..+ .+.......+.....++++|||+++++++.- ..+|.++
T Consensus 278 i--~~i--ea~vkdGK~~~V~--gn-~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVankl--S~tVSVI 348 (635)
T PRK02888 278 I--ARI--EEAVKAGKFKTIG--GS-KVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKL--SPTVTVI 348 (635)
T ss_pred h--HHH--HHhhhCCCEEEEC--CC-EEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCC--CCcEEEE
Confidence 0 001 1345678876663 33 899999998 3455555667778999999999999998865 3799999
Q ss_pred eccCCeE------------EEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-C----------CceEEEEeec
Q 014755 163 SCHTWEI------------MGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-D----------GRCLLKYQAY 219 (419)
Q Consensus 163 d~~~~~~------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~----------~~~~~~~~~~ 219 (419)
|+.+.+. ..+.... ......+|.++|....+ ...|..|..|++ . ...+.++..|
T Consensus 349 Dv~k~k~~~~~~~~~~~~vvaevevG-lGPLHTaFDg~G~ayts--lf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~ 425 (635)
T PRK02888 349 DVRKLDDLFDGKIKPRDAVVAEPELG-LGPLHTAFDGRGNAYTT--LFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVH 425 (635)
T ss_pred EChhhhhhhhccCCccceEEEeeccC-CCcceEEECCCCCEEEe--EeecceeEEEehHHHHHHhccccCCcceecccCC
Confidence 9987542 2333322 23346788888875544 455889999998 3 2344444433
Q ss_pred CCCCc---eeEEEEccCCCeEEEEE
Q 014755 220 ESGLG---VKSISWSPCGQFLAVGS 241 (419)
Q Consensus 220 ~~~~~---v~~~~~s~~~~~l~~~~ 241 (419)
-..+. ..+=.-.|+|++|++..
T Consensus 426 y~pgh~~~~~g~t~~~dgk~l~~~n 450 (635)
T PRK02888 426 YQPGHNHASMGETKEADGKWLVSLN 450 (635)
T ss_pred CccceeeecCCCcCCCCCCEEEEcc
Confidence 32111 11112367899988864
No 318
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=98.96 E-value=6.8e-06 Score=74.03 Aligned_cols=242 Identities=14% Similarity=0.069 Sum_probs=142.0
Q ss_pred eEEcCCCCEEEEEe--CC----eEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccC----------CeEEEEE
Q 014755 13 SCFSPNARYIAVAV--DY----RLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKR----------LMIQAWS 76 (419)
Q Consensus 13 ~~~s~d~~~la~~~--~~----~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~----------g~i~iw~ 76 (419)
.++||||++||.+- .| .++++|+++++.+...-.......+.|.+|++.++....++ ..|+.|.
T Consensus 129 ~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~ 208 (414)
T PF02897_consen 129 FSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHK 208 (414)
T ss_dssp EEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEE
T ss_pred eeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccccccceEEEeCCCCEEEEEEeCcccccccCCCCcEEEEEE
Confidence 68999999999883 23 39999999998776321112223499999999988776543 2478888
Q ss_pred ccCCcce--eeeecCCcc--EeEEEECCCCCEEEEEecCC---CeEEEEEcCCC-----eEEEeccCCCCeeeEEEccCC
Q 014755 77 LTQPEWT--CKIDEGLAG--IAYARWSPDSRHILTTSDFQ---LRLTVWSLLNT-----ACVHVQSPKHASKGVAFTQDG 144 (419)
Q Consensus 77 ~~~~~~~--~~~~~~~~~--v~~~~~~~~~~~l~~~~~~~---~~i~iwd~~~~-----~~~~~~~~~~~~~~~~~~~~~ 144 (419)
+.+.... ..+...... ...+..++|+++++.....+ ..+.+.++..+ ....+......+....-+..+
T Consensus 209 ~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~ 288 (414)
T PF02897_consen 209 LGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYVDHHGD 288 (414)
T ss_dssp TTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEEEEETT
T ss_pred CCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEEEccCC
Confidence 8766433 233333322 56788999999988654322 26888888875 444444444444333333344
Q ss_pred CEEEEEeecCCCCeEEEEeccCCe---EEEEEecccc--ceeeeeECCCCCeEEE-EcCCCCceEEEEcCC-CceEEEEe
Q 014755 145 KFAAICTRRDCKDYINLLSCHTWE---IMGVFAVDTL--DLADIEWSPDDSAIVI-WDSPLEYKVLIYSPD-GRCLLKYQ 217 (419)
Q Consensus 145 ~~l~~~~~~~~~g~v~i~d~~~~~---~~~~~~~~~~--~v~~~~~~~~~~~l~~-~~~~~~~~i~~~d~~-~~~~~~~~ 217 (419)
.+++....+...+.|.-.++.... ....+..+.. .+..+.. .+.+|++ ........|+++++. +.....+.
T Consensus 289 ~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~--~~~~Lvl~~~~~~~~~l~v~~~~~~~~~~~~~ 366 (414)
T PF02897_consen 289 RLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSL--FKDYLVLSYRENGSSRLRVYDLDDGKESREIP 366 (414)
T ss_dssp EEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEE--ETTEEEEEEEETTEEEEEEEETT-TEEEEEEE
T ss_pred EEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEE--ECCEEEEEEEECCccEEEEEECCCCcEEeeec
Confidence 455555444445678888887754 2324444444 3444444 4445544 222334679999997 77777776
Q ss_pred ecCCCCceeEEEEccCCCeEEEE-E---ecCcEEEEEcCCceee
Q 014755 218 AYESGLGVKSISWSPCGQFLAVG-S---YDQTLRVLNHLTWKTF 257 (419)
Q Consensus 218 ~~~~~~~v~~~~~s~~~~~l~~~-~---~d~~i~v~d~~~~~~~ 257 (419)
.... +.|..+...+++..+... + .-.++..||+.+++..
T Consensus 367 ~p~~-g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~~ 409 (414)
T PF02897_consen 367 LPEA-GSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGELT 409 (414)
T ss_dssp SSSS-SEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCEE
T ss_pred CCcc-eEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCEE
Confidence 5543 246666666666544333 2 2367899999887753
No 319
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.92 E-value=1.3e-08 Score=81.21 Aligned_cols=231 Identities=17% Similarity=0.202 Sum_probs=149.8
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCCCc-E-E---EEe-ec------------CcceeEEEEecCCC--eEEEEeccCCe
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHSFK-V-V---QLF-SC------------LDKISYIEWALDSE--YILCGLYKRLM 71 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~~~-~-~---~~~-~~------------~~~v~~~~~s~~~~--~l~~~~~~~g~ 71 (419)
|.|...|.|||+|. .|+|.+|.-+... + . ..+ .| ...|..+.|..++. .++..+.| .+
T Consensus 32 Vefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLlstNd-kt 110 (460)
T COG5170 32 VEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLSTND-KT 110 (460)
T ss_pred EEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEecCC-ce
Confidence 67888999999998 6789998655322 1 1 111 12 35688899887543 33444445 69
Q ss_pred EEEEEccCCcc---------------------------eeee----------------ecCCccEeEEEECCCCCEEEEE
Q 014755 72 IQAWSLTQPEW---------------------------TCKI----------------DEGLAGIAYARWSPDSRHILTT 108 (419)
Q Consensus 72 i~iw~~~~~~~---------------------------~~~~----------------~~~~~~v~~~~~~~~~~~l~~~ 108 (419)
|++|.+..... ..++ ..|.-.+.++.|+.|.+.++++
T Consensus 111 iKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~et~lSa 190 (460)
T COG5170 111 IKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDKETLLSA 190 (460)
T ss_pred eeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCchheeeec
Confidence 99999854310 0000 1244557889999998888876
Q ss_pred ecCCCeEEEEEcCCC--e--EEEeccCC-----CCeeeEEEccCCC-EEEEEeecCCCCeEEEEeccCCeEE------EE
Q 014755 109 SDFQLRLTVWSLLNT--A--CVHVQSPK-----HASKGVAFTQDGK-FAAICTRRDCKDYINLLSCHTWEIM------GV 172 (419)
Q Consensus 109 ~~~~~~i~iwd~~~~--~--~~~~~~~~-----~~~~~~~~~~~~~-~l~~~~~~~~~g~v~i~d~~~~~~~------~~ 172 (419)
.. - .|.+|+++-. . .+-+..+. .-+++..|+|... .+...+. +|.|++-|++...+. ..
T Consensus 191 Dd-L-rINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsS---kG~Ikl~DlRq~alcdn~~klfe 265 (460)
T COG5170 191 DD-L-RINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSS---KGEIKLNDLRQSALCDNSKKLFE 265 (460)
T ss_pred cc-e-eeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecC---CCcEEehhhhhhhhccCchhhhh
Confidence 54 3 7999998742 2 12233333 2348889999763 3444433 389999999853211 00
Q ss_pred ----------EeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC--CCceEEEEeecCCC----------Cce---eE
Q 014755 173 ----------FAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP--DGRCLLKYQAYESG----------LGV---KS 227 (419)
Q Consensus 173 ----------~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~--~~~~~~~~~~~~~~----------~~v---~~ 227 (419)
+..-...|..+.|+++|++++. ..-.++++||. ...+++++..|... ..| ..
T Consensus 266 ~~~D~v~~~ff~eivsSISD~kFs~ngryIls---RdyltvkiwDvnm~k~pikTi~~h~~l~~~l~d~YEnDaifdkFe 342 (460)
T COG5170 266 LTIDGVDVDFFEEIVSSISDFKFSDNGRYILS---RDYLTVKIWDVNMAKNPIKTIPMHCDLMDELNDVYENDAIFDKFE 342 (460)
T ss_pred hccCcccchhHHHHhhhhcceEEcCCCcEEEE---eccceEEEEecccccCCceeechHHHHHHHHHhhhhccceeeeEE
Confidence 1112245788999999999987 33578999999 66777777655321 122 35
Q ss_pred EEEccCCCeEEEEEecCcEEEEEcC
Q 014755 228 ISWSPCGQFLAVGSYDQTLRVLNHL 252 (419)
Q Consensus 228 ~~~s~~~~~l~~~~~d~~i~v~d~~ 252 (419)
+.||.|.+.+++|+..+..-+|-..
T Consensus 343 isfSgd~~~v~sgsy~NNfgiyp~~ 367 (460)
T COG5170 343 ISFSGDDKHVLSGSYSNNFGIYPTD 367 (460)
T ss_pred EEecCCcccccccccccceeeeccc
Confidence 7889999999999998888777643
No 320
>KOG2695 consensus WD40 repeat protein [General function prediction only]
Probab=98.88 E-value=1.5e-08 Score=81.98 Aligned_cols=161 Identities=9% Similarity=0.045 Sum_probs=120.7
Q ss_pred EECCC--CCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCC----eEE
Q 014755 97 RWSPD--SRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTW----EIM 170 (419)
Q Consensus 97 ~~~~~--~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~----~~~ 170 (419)
+|+-+ +-. ++.+.+. .+-+-|+++|-...+. .+..|.++.|...++.+..|..+ |.|..+|++.+ ...
T Consensus 218 awSlni~gyh-fs~G~sq-qv~L~nvetg~~qsf~-sksDVfAlQf~~s~nLv~~GcRn---geI~~iDLR~rnqG~~~~ 291 (425)
T KOG2695|consen 218 AWSLNIMGYH-FSVGLSQ-QVLLTNVETGHQQSFQ-SKSDVFALQFAGSDNLVFNGCRN---GEIFVIDLRCRNQGNGWC 291 (425)
T ss_pred hhhhccceee-ecccccc-eeEEEEeecccccccc-cchhHHHHHhcccCCeeEecccC---CcEEEEEeeecccCCCcc
Confidence 56543 333 4445555 7889999998766654 77788999999888999999886 89999999875 222
Q ss_pred EEEeccccceeeeeECC-CCCeEEEEcCCCCceEEEEcC-C---CceEEEEeecCCCCceeEEEEccCCCeEEEEEecCc
Q 014755 171 GVFAVDTLDLADIEWSP-DDSAIVIWDSPLEYKVLIYSP-D---GRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQT 245 (419)
Q Consensus 171 ~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~i~~~d~-~---~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~ 245 (419)
...--|+..|+++..-. ++++|.. ...+|+|.+||. - ++-+.++.+|.+.....-+-..+....+++++.|..
T Consensus 292 a~rlyh~Ssvtslq~Lq~s~q~Lma--S~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcy 369 (425)
T KOG2695|consen 292 AQRLYHDSSVTSLQILQFSQQKLMA--SDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCY 369 (425)
T ss_pred eEEEEcCcchhhhhhhccccceEee--ccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeE
Confidence 23334678888888766 6777777 567899999999 3 334778888766545555666777788999999999
Q ss_pred EEEEEcCCceeeeeeccccc
Q 014755 246 LRVLNHLTWKTFAEFMHLST 265 (419)
Q Consensus 246 i~v~d~~~~~~~~~~~~~~~ 265 (419)
.|+|.+.++..+.++..+..
T Consensus 370 tRiWsl~~ghLl~tipf~~s 389 (425)
T KOG2695|consen 370 TRIWSLDSGHLLCTIPFPYS 389 (425)
T ss_pred EEEEecccCceeeccCCCCc
Confidence 99999999999988864433
No 321
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=98.86 E-value=4.1e-09 Score=95.65 Aligned_cols=195 Identities=15% Similarity=0.188 Sum_probs=139.8
Q ss_pred ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCC-eEEEEEcCC-
Q 014755 45 SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQL-RLTVWSLLN- 122 (419)
Q Consensus 45 ~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~-~i~iwd~~~- 122 (419)
.|....+|++|+-+.+.|++|+.. |.|+++++.+|........|..+|+.+.-+.||..+++.+.... -..+|++..
T Consensus 1099 d~~~~fTc~afs~~~~hL~vG~~~-Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~ 1177 (1516)
T KOG1832|consen 1099 DETALFTCIAFSGGTNHLAVGSHA-GEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASST 1177 (1516)
T ss_pred ccccceeeEEeecCCceEEeeecc-ceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhccccc
Confidence 367889999999999999999977 99999999999988889999999999999999999888765431 467899876
Q ss_pred CeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEec----cccceeeeeECCCCCeEEEEcCC
Q 014755 123 TACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAV----DTLDLADIEWSPDDSAIVIWDSP 198 (419)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~ 198 (419)
+.... .-..-.++.|+.....-+.|... ....+||+.++..+.++.. ....-++..|+|+..+++- +
T Consensus 1178 ~~~~H---sf~ed~~vkFsn~~q~r~~gt~~---d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIln-d-- 1248 (1516)
T KOG1832|consen 1178 GGPRH---SFDEDKAVKFSNSLQFRALGTEA---DDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLILN-D-- 1248 (1516)
T ss_pred cCccc---cccccceeehhhhHHHHHhcccc---cceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEee-C--
Confidence 22221 11233677887765444444432 4799999999887666322 2233477889999886653 3
Q ss_pred CCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeec
Q 014755 199 LEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 199 ~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 261 (419)
| .+||. ..+.++.+..... --.=.|+|.|..++..+. |||+++.+.++...
T Consensus 1249 --G--vLWDvR~~~aIh~FD~ft~---~~~G~FHP~g~eVIINSE-----IwD~RTF~lLh~VP 1300 (1516)
T KOG1832|consen 1249 --G--VLWDVRIPEAIHRFDQFTD---YGGGGFHPSGNEVIINSE-----IWDMRTFKLLHSVP 1300 (1516)
T ss_pred --c--eeeeeccHHHHhhhhhhee---cccccccCCCceEEeech-----hhhhHHHHHHhcCc
Confidence 2 47887 4455555543321 223459999998887664 89999887766653
No 322
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=98.84 E-value=2.9e-06 Score=80.46 Aligned_cols=194 Identities=12% Similarity=0.161 Sum_probs=128.4
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEcc----C--------
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLT----Q-------- 79 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~----~-------- 79 (419)
+.|-.++..|..+. .|.|.+-|.++......-.-...|.+++||||++.++..+.. +++.+-+-. .
T Consensus 74 ~~fl~d~~~i~v~~~~G~iilvd~et~~~eivg~vd~GI~aaswS~Dee~l~liT~~-~tll~mT~~f~~i~E~~L~~d~ 152 (1265)
T KOG1920|consen 74 VQFLADTNSICVITALGDIILVDPETLELEIVGNVDNGISAASWSPDEELLALITGR-QTLLFMTKDFEPIAEKPLDADD 152 (1265)
T ss_pred EEEecccceEEEEecCCcEEEEcccccceeeeeeccCceEEEeecCCCcEEEEEeCC-cEEEEEeccccchhcccccccc
Confidence 45556666666665 778888888887766555567889999999999999988865 466554321 0
Q ss_pred -----------CcceeeeecC---------------------CccEeEEEECCCCCEEEEEe----cCCCeEEEEEcCCC
Q 014755 80 -----------PEWTCKIDEG---------------------LAGIAYARWSPDSRHILTTS----DFQLRLTVWSLLNT 123 (419)
Q Consensus 80 -----------~~~~~~~~~~---------------------~~~v~~~~~~~~~~~l~~~~----~~~~~i~iwd~~~~ 123 (419)
|+...++.+. .+.=+.+.|--||+++++.. .+...|++||-+ |
T Consensus 153 ~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g 231 (1265)
T KOG1920|consen 153 ERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIRVYDRE-G 231 (1265)
T ss_pred ccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEEEeccc-c
Confidence 0111122211 11123589999999998853 221389999988 4
Q ss_pred eEEEecc-CCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC---CeEEEEEeccccceeeeeECCCCCeEEEEcCCC
Q 014755 124 ACVHVQS-PKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT---WEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPL 199 (419)
Q Consensus 124 ~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~ 199 (419)
....... ....-.+++|-|.|..+++......++.|.++.-+. ++....+......+..++|+.++..|++.....
T Consensus 232 ~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~ 311 (1265)
T KOG1920|consen 232 ALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNL 311 (1265)
T ss_pred hhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCcccccchheeeecCCCCceeeeeccc
Confidence 4333222 222337999999999999987766667899987553 333333344445589999999999998743333
Q ss_pred C-ceEEEEcC
Q 014755 200 E-YKVLIYSP 208 (419)
Q Consensus 200 ~-~~i~~~d~ 208 (419)
. ..|++|-.
T Consensus 312 e~~~v~lwt~ 321 (1265)
T KOG1920|consen 312 ENSLVQLWTT 321 (1265)
T ss_pred ccceEEEEEe
Confidence 4 44999987
No 323
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=98.84 E-value=1.2e-05 Score=71.02 Aligned_cols=220 Identities=13% Similarity=0.066 Sum_probs=157.7
Q ss_pred CeEEcCCCCEEEEEe--CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEec--cCCeEEEEEccCCcceeeee
Q 014755 12 PSCFSPNARYIAVAV--DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLY--KRLMIQAWSLTQPEWTCKID 87 (419)
Q Consensus 12 ~~~~s~d~~~la~~~--~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--~~g~i~iw~~~~~~~~~~~~ 87 (419)
.++++++++.+.... .+.|.+.|..+.+......-......++++|+++.+.++.. .++++.+.|..+++......
T Consensus 78 ~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~ 157 (381)
T COG3391 78 GVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIP 157 (381)
T ss_pred ceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeeccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEe
Confidence 478999998666665 67899999888888877665457789999999998888766 24799999999888877755
Q ss_pred cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-----eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEE
Q 014755 88 EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-----VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLL 162 (419)
Q Consensus 88 ~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~ 162 (419)
....+ ..+++.|+|+.++.+....+.|.+.|..+....+ ..........+.++|++.++.+.......+.+...
T Consensus 158 vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~i 236 (381)
T COG3391 158 VGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKI 236 (381)
T ss_pred cCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEE
Confidence 44445 8899999999988887555699999987766553 12223334789999999988877665323589999
Q ss_pred eccCCeEEEEEecccc-ceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCC-CCceeEEEEccC
Q 014755 163 SCHTWEIMGVFAVDTL-DLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYES-GLGVKSISWSPC 233 (419)
Q Consensus 163 d~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~-~~~v~~~~~s~~ 233 (419)
|..++........-.. ....+..+|+|+.+.+.... .+.+.+.|. +............ ...+..+++.+.
T Consensus 237 d~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~-~~~V~vid~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 309 (381)
T COG3391 237 DTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQ-GGTVSVIDGATDRVVKTGPTGNEALGEPVSIAISPL 309 (381)
T ss_pred eCCCceEEEeccccccCCCCceeECCCCCEEEEEecC-CCeEEEEeCCCCceeeeecccccccccceeccceee
Confidence 9988877665222222 56778999999999885433 578888888 4455444433222 112455555543
No 324
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=98.79 E-value=4e-09 Score=95.71 Aligned_cols=124 Identities=14% Similarity=0.139 Sum_probs=100.3
Q ss_pred eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEc
Q 014755 128 VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYS 207 (419)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d 207 (419)
+..+...-++++|+.+.++|++|+.. |.|++++..+|........|...++.+.-+.+|..+++.+..+.-...+|+
T Consensus 1097 frd~~~~fTc~afs~~~~hL~vG~~~---Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~ 1173 (1516)
T KOG1832|consen 1097 FRDETALFTCIAFSGGTNHLAVGSHA---GEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWD 1173 (1516)
T ss_pred hhccccceeeEEeecCCceEEeeecc---ceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhc
Confidence 44555666999999999999999886 899999999999999999999999999999999998875555555678899
Q ss_pred C--CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeee
Q 014755 208 P--DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEF 260 (419)
Q Consensus 208 ~--~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 260 (419)
+ .+...+.+. .-.++.|+..-+.-+.|.......+||++++.++.++
T Consensus 1174 ~~s~~~~~Hsf~------ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~ty 1222 (1516)
T KOG1832|consen 1174 ASSTGGPRHSFD------EDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTY 1222 (1516)
T ss_pred cccccCcccccc------ccceeehhhhHHHHHhcccccceEEEecccCcHHHHh
Confidence 8 566666665 3557888876655566665567899999999887774
No 325
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=98.79 E-value=3.7e-05 Score=70.41 Aligned_cols=232 Identities=14% Similarity=0.119 Sum_probs=126.8
Q ss_pred CCCEEEEEeCCeEEEEecCCCcEEEEeecCcc-------ee--EEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeec
Q 014755 18 NARYIAVAVDYRLVVRDAHSFKVVQLFSCLDK-------IS--YIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDE 88 (419)
Q Consensus 18 d~~~la~~~~~~i~i~~~~~~~~~~~~~~~~~-------v~--~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~ 88 (419)
+++.++...++.|.-.|..+++.+-.+.-... +. .+... ++..+++++.+ |.|.-+|.++|+.+.+...
T Consensus 61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~-g~v~AlD~~TG~~~W~~~~ 138 (488)
T cd00216 61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFD-GRLVALDAETGKQVWKFGN 138 (488)
T ss_pred CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCC-CeEEEEECCCCCEeeeecC
Confidence 34433333478899999999987765542211 00 11111 22567777655 8999999999988766543
Q ss_pred CCcc--EeEEEECC--CCCEEEEEec--------CCCeEEEEEcCCCeEEE-eccCCC--------------------Ce
Q 014755 89 GLAG--IAYARWSP--DSRHILTTSD--------FQLRLTVWSLLNTACVH-VQSPKH--------------------AS 135 (419)
Q Consensus 89 ~~~~--v~~~~~~~--~~~~l~~~~~--------~~~~i~iwd~~~~~~~~-~~~~~~--------------------~~ 135 (419)
.... -..+.-+| .+..++.++. ..+.+..+|..+|+.+- ...... .+
T Consensus 139 ~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~v 218 (488)
T cd00216 139 NDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTS 218 (488)
T ss_pred CCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCc
Confidence 3221 00111111 1234555432 12388999999988766 222111 01
Q ss_pred -eeEEEccCCCEEEEEeecC---------------CCCeEEEEeccCCeEEEEEecccccee------eeeEC----CCC
Q 014755 136 -KGVAFTQDGKFAAICTRRD---------------CKDYINLLSCHTWEIMGVFAVDTLDLA------DIEWS----PDD 189 (419)
Q Consensus 136 -~~~~~~~~~~~l~~~~~~~---------------~~g~v~i~d~~~~~~~~~~~~~~~~v~------~~~~~----~~~ 189 (419)
...++.+.+..+++++.+. ..+.|.-+|.++++.+-.++....... ...+. -++
T Consensus 219 w~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g 298 (488)
T cd00216 219 WASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDG 298 (488)
T ss_pred cCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccCC
Confidence 2345555566777776441 113799999999988776543211110 01111 123
Q ss_pred C---eEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEE------------------ecCcEE
Q 014755 190 S---AIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGS------------------YDQTLR 247 (419)
Q Consensus 190 ~---~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~------------------~d~~i~ 247 (419)
. .+++ +..+|.++.+|. +|+.+-..... ...++.+| ..++.+. .+|.+.
T Consensus 299 ~~~~~V~~--g~~~G~l~ald~~tG~~~W~~~~~-----~~~~~~~~--~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~ 369 (488)
T cd00216 299 KPVPAIVH--APKNGFFYVLDRTTGKLISARPEV-----EQPMAYDP--GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLA 369 (488)
T ss_pred CeeEEEEE--ECCCceEEEEECCCCcEeeEeEee-----ccccccCC--ceEEEccccccccCcccccCCCCCCCceEEE
Confidence 2 3444 566899999999 88887765432 11233444 2333321 345677
Q ss_pred EEEcCCceeeeee
Q 014755 248 VLNHLTWKTFAEF 260 (419)
Q Consensus 248 v~d~~~~~~~~~~ 260 (419)
-.|+.+|+.+-+.
T Consensus 370 AlD~~tG~~~W~~ 382 (488)
T cd00216 370 ALDPKTGKVVWEK 382 (488)
T ss_pred EEeCCCCcEeeEe
Confidence 7777777665544
No 326
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=98.79 E-value=1.8e-05 Score=66.61 Aligned_cols=227 Identities=14% Similarity=0.034 Sum_probs=137.5
Q ss_pred EEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEe
Q 014755 95 YARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFA 174 (419)
Q Consensus 95 ~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~ 174 (419)
...|.++...|+.+.-.++.|.-|+..+++...+..+........+...+ .|+++. ..+.+++.+++..+..+.
T Consensus 29 gP~w~~~~~~L~w~DI~~~~i~r~~~~~g~~~~~~~p~~~~~~~~~d~~g-~Lv~~~-----~g~~~~~~~~~~~~t~~~ 102 (307)
T COG3386 29 GPVWDPDRGALLWVDILGGRIHRLDPETGKKRVFPSPGGFSSGALIDAGG-RLIACE-----HGVRLLDPDTGGKITLLA 102 (307)
T ss_pred CccCcCCCCEEEEEeCCCCeEEEecCCcCceEEEECCCCcccceeecCCC-eEEEEc-----cccEEEeccCCceeEEec
Confidence 45678888888888766669999999887666654444433444444444 444443 257777876655533322
Q ss_pred c-----cccceeeeeECCCCCeEEEEcC---------CCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEE
Q 014755 175 V-----DTLDLADIEWSPDDSAIVIWDS---------PLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVG 240 (419)
Q Consensus 175 ~-----~~~~v~~~~~~~~~~~l~~~~~---------~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 240 (419)
. .....+.+...|+|.+.+..-. ...+.++.+|..+...+.+..+-. ..+.++||||++.++.+
T Consensus 103 ~~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~--~~NGla~SpDg~tly~a 180 (307)
T COG3386 103 EPEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLT--IPNGLAFSPDGKTLYVA 180 (307)
T ss_pred cccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEE--ecCceEECCCCCEEEEE
Confidence 2 1134567888899987765222 112668888876776666655322 56889999999877776
Q ss_pred Ee-cCcEEEEEcCC--ceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCC
Q 014755 241 SY-DQTLRVLNHLT--WKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIP 317 (419)
Q Consensus 241 ~~-d~~i~v~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (419)
.. .+.|.-|++.. +..-.. ...+.+.
T Consensus 181 DT~~~~i~r~~~d~~~g~~~~~----------~~~~~~~----------------------------------------- 209 (307)
T COG3386 181 DTPANRIHRYDLDPATGPIGGR----------RGFVDFD----------------------------------------- 209 (307)
T ss_pred eCCCCeEEEEecCcccCccCCc----------ceEEEcc-----------------------------------------
Confidence 54 46787777653 110000 0000010
Q ss_pred CCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc-cCCCeeEEEeC-CCCCeEEEEe
Q 014755 318 ISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV-QKDPIRAATWD-PTCTRLVLCT 395 (419)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s-~~~~~l~s~~ 395 (419)
...+..-.++...+|.+.+++... -+.|.+|+.+ ++++..+. ....+++++|- |+.+.|...+
T Consensus 210 -------------~~~G~PDG~~vDadG~lw~~a~~~-g~~v~~~~pd-G~l~~~i~lP~~~~t~~~FgG~~~~~L~iTs 274 (307)
T COG3386 210 -------------EEPGLPDGMAVDADGNLWVAAVWG-GGRVVRFNPD-GKLLGEIKLPVKRPTNPAFGGPDLNTLYITS 274 (307)
T ss_pred -------------CCCCCCCceEEeCCCCEEEecccC-CceEEEECCC-CcEEEEEECCCCCCccceEeCCCcCEEEEEe
Confidence 011112236778888888655443 0389999988 88777765 44788889884 5556554443
No 327
>KOG2695 consensus WD40 repeat protein [General function prediction only]
Probab=98.77 E-value=3.9e-08 Score=79.75 Aligned_cols=158 Identities=9% Similarity=0.125 Sum_probs=116.1
Q ss_pred eEEcCC--CCEEEEEeCCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC----cceeee
Q 014755 13 SCFSPN--ARYIAVAVDYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP----EWTCKI 86 (419)
Q Consensus 13 ~~~s~d--~~~la~~~~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~----~~~~~~ 86 (419)
++||-+ |-.+++|.+-.|.+-|+++|..... ...+.|.++.|.-.++++..|+.+ |.|..+|++.+ ......
T Consensus 217 CawSlni~gyhfs~G~sqqv~L~nvetg~~qsf-~sksDVfAlQf~~s~nLv~~GcRn-geI~~iDLR~rnqG~~~~a~r 294 (425)
T KOG2695|consen 217 CAWSLNIMGYHFSVGLSQQVLLTNVETGHQQSF-QSKSDVFALQFAGSDNLVFNGCRN-GEIFVIDLRCRNQGNGWCAQR 294 (425)
T ss_pred hhhhhccceeeecccccceeEEEEeeccccccc-ccchhHHHHHhcccCCeeEecccC-CcEEEEEeeecccCCCcceEE
Confidence 455543 3334455577788999998865443 467789999999989999999976 89999999865 334444
Q ss_pred ecCCccEeEEEECC-CCCEEEEEecCCCeEEEEEcCCCeE---EE-eccCCCCee--eEEEccCCCEEEEEeecCCCCeE
Q 014755 87 DEGLAGIAYARWSP-DSRHILTTSDFQLRLTVWSLLNTAC---VH-VQSPKHASK--GVAFTQDGKFAAICTRRDCKDYI 159 (419)
Q Consensus 87 ~~~~~~v~~~~~~~-~~~~l~~~~~~~~~i~iwd~~~~~~---~~-~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~g~v 159 (419)
.-|...|+++.... ++++|++.+.++ .|++||++.-++ +. ..+|-..-. -+-..+....+++++.| -..
T Consensus 295 lyh~Ssvtslq~Lq~s~q~LmaS~M~g-kikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdD---cyt 370 (425)
T KOG2695|consen 295 LYHDSSVTSLQILQFSQQKLMASDMTG-KIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDD---CYT 370 (425)
T ss_pred EEcCcchhhhhhhccccceEeeccCcC-ceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCe---eEE
Confidence 57889999998877 788888888877 999999987555 33 555544432 23345556677777765 689
Q ss_pred EEEeccCCeEEEEEecc
Q 014755 160 NLLSCHTWEIMGVFAVD 176 (419)
Q Consensus 160 ~i~d~~~~~~~~~~~~~ 176 (419)
+||.++.++++.+++..
T Consensus 371 RiWsl~~ghLl~tipf~ 387 (425)
T KOG2695|consen 371 RIWSLDSGHLLCTIPFP 387 (425)
T ss_pred EEEecccCceeeccCCC
Confidence 99999999998887654
No 328
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=98.77 E-value=1.7e-05 Score=72.52 Aligned_cols=196 Identities=13% Similarity=0.101 Sum_probs=113.0
Q ss_pred CCeEEEEeccCCeEEEEEccCCcceeeeecCCc------cEe--EEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-ec
Q 014755 59 SEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLA------GIA--YARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQ 129 (419)
Q Consensus 59 ~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~------~v~--~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~ 129 (419)
+..+++++.+ +.+.-+|..+|+.+.+...... .+. .+... ++..++.++.++ .|.-+|.++|+.+- ..
T Consensus 61 ~g~vy~~~~~-g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g-~v~AlD~~TG~~~W~~~ 137 (488)
T cd00216 61 DGDMYFTTSH-SALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDG-RLVALDAETGKQVWKFG 137 (488)
T ss_pred CCEEEEeCCC-CcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCC-eEEEEECCCCCEeeeec
Confidence 3456666655 7999999999987766543221 000 01111 225677777666 99999999998876 32
Q ss_pred cCCCC-----e-eeEEEccCCCEEEEEeec------CCCCeEEEEeccCCeEEEEEeccccc------------------
Q 014755 130 SPKHA-----S-KGVAFTQDGKFAAICTRR------DCKDYINLLSCHTWEIMGVFAVDTLD------------------ 179 (419)
Q Consensus 130 ~~~~~-----~-~~~~~~~~~~~l~~~~~~------~~~g~v~i~d~~~~~~~~~~~~~~~~------------------ 179 (419)
..... + ....+. +..+++++.+ ...+.++-+|..+++.+-.+......
T Consensus 138 ~~~~~~~~~~i~ssP~v~--~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g 215 (488)
T cd00216 138 NNDQVPPGYTMTGAPTIV--KKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGG 215 (488)
T ss_pred CCCCcCcceEecCCCEEE--CCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCC
Confidence 22211 1 222222 2345554421 11368999999999887666542110
Q ss_pred --e-eeeeECCCCCeEEEEcCCCC------------------ceEEEEcC-CCceEEEEeecCCCC----ceeEEEEc--
Q 014755 180 --L-ADIEWSPDDSAIVIWDSPLE------------------YKVLIYSP-DGRCLLKYQAYESGL----GVKSISWS-- 231 (419)
Q Consensus 180 --v-~~~~~~~~~~~l~~~~~~~~------------------~~i~~~d~-~~~~~~~~~~~~~~~----~v~~~~~s-- 231 (419)
+ ...++.+.+..+++. ..+ +.+..+|. +|+.+-.++...+.. ......+.
T Consensus 216 ~~vw~~pa~d~~~g~V~vg--~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~ 293 (488)
T cd00216 216 GTSWASPTYDPKTNLVYVG--TGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADI 293 (488)
T ss_pred CCccCCeeEeCCCCEEEEE--CCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEec
Confidence 0 123444445566662 222 37999999 888887765332210 01111111
Q ss_pred --cCCC---eEEEEEecCcEEEEEcCCceeeeeec
Q 014755 232 --PCGQ---FLAVGSYDQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 232 --~~~~---~l~~~~~d~~i~v~d~~~~~~~~~~~ 261 (419)
-+|. .++.++.+|.+..+|.++|+.+-...
T Consensus 294 ~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~ 328 (488)
T cd00216 294 KPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARP 328 (488)
T ss_pred cccCCCeeEEEEEECCCceEEEEECCCCcEeeEeE
Confidence 1333 57778889999999999999877654
No 329
>KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair]
Probab=98.76 E-value=3e-07 Score=84.18 Aligned_cols=179 Identities=9% Similarity=0.137 Sum_probs=124.6
Q ss_pred CCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCC
Q 014755 143 DGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYES 221 (419)
Q Consensus 143 ~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~ 221 (419)
++..++.|+-. ..+..+|+++.+..+........+.-+. .+++.+.+ +...|+|.+-|+ +.+.++++..|.+
T Consensus 146 ~~~~~i~Gg~Q---~~li~~Dl~~~~e~r~~~v~a~~v~imR--~Nnr~lf~--G~t~G~V~LrD~~s~~~iht~~aHs~ 218 (1118)
T KOG1275|consen 146 GPSTLIMGGLQ---EKLIHIDLNTEKETRTTNVSASGVTIMR--YNNRNLFC--GDTRGTVFLRDPNSFETIHTFDAHSG 218 (1118)
T ss_pred CCcceeecchh---hheeeeecccceeeeeeeccCCceEEEE--ecCcEEEe--ecccceEEeecCCcCceeeeeecccc
Confidence 34455555543 4788899999888877766554555444 46788888 777899999999 8889999998877
Q ss_pred CCceeEEEEccCCCeEEEEEe---------cCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeecc
Q 014755 222 GLGVKSISWSPCGQFLAVGSY---------DQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLN 292 (419)
Q Consensus 222 ~~~v~~~~~s~~~~~l~~~~~---------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (419)
.+..+. -.|+.|++++. |.-|+|||++..+.+..+..+.
T Consensus 219 --siSDfD--v~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~---------------------------- 266 (1118)
T KOG1275|consen 219 --SISDFD--VQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPY---------------------------- 266 (1118)
T ss_pred --ceeeee--ccCCeEEEeecccccccccccchhhhhhhhhhhccCCccccc----------------------------
Confidence 676554 47889999875 4458899988765554433100
Q ss_pred CccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccC-CeEEEEecCCCCceEEEeeccC---CC
Q 014755 293 DDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSD-SQYICTRNDSMPTTLWIWDICR---QE 368 (419)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~~~~~d~~~~i~iwd~~~---~~ 368 (419)
+ -.-+.|.|. -..+|+.+.. |...+-|..+ ..
T Consensus 267 -----------------------------------------~-P~flrf~Psl~t~~~V~S~s--Gq~q~vd~~~lsNP~ 302 (1118)
T KOG1275|consen 267 -----------------------------------------G-PQFLRFHPSLTTRLAVTSQS--GQFQFVDTATLSNPP 302 (1118)
T ss_pred -----------------------------------------C-chhhhhcccccceEEEEecc--cceeeccccccCCCc
Confidence 0 123455554 2456666665 8888888433 22
Q ss_pred ceeec--ccCCCeeEEEeCCCCCeEEEEeCCCcEEEee
Q 014755 369 PAAIL--VQKDPIRAATWDPTCTRLVLCTGSSHLYMWT 404 (419)
Q Consensus 369 ~~~~~--~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~ 404 (419)
....+ .-...+..+++|++++.||.+..+|.|.+|.
T Consensus 303 ~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 303 AGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred cceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence 22121 2445599999999999999999999999998
No 330
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.74 E-value=2.1e-08 Score=56.11 Aligned_cols=36 Identities=14% Similarity=0.361 Sum_probs=32.1
Q ss_pred ceeec-ccCCCeeEEEeCCCCCeEEEEeCCCcEEEee
Q 014755 369 PAAIL-VQKDPIRAATWDPTCTRLVLCTGSSHLYMWT 404 (419)
Q Consensus 369 ~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~ 404 (419)
++..+ +|.+.|++++|+|++++|++++.|+.|++||
T Consensus 3 ~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 3 CVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred EEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 34444 6999999999999999999999999999997
No 331
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.73 E-value=1.5e-05 Score=63.63 Aligned_cols=153 Identities=12% Similarity=0.131 Sum_probs=102.2
Q ss_pred ccEeEEEECCCCC-EEEEEecCCCeEEEEEcCCCeEEE-eccCCCCe--eeEEEccCCCEEEEEeec--CCCCeEEEEec
Q 014755 91 AGIAYARWSPDSR-HILTTSDFQLRLTVWSLLNTACVH-VQSPKHAS--KGVAFTQDGKFAAICTRR--DCKDYINLLSC 164 (419)
Q Consensus 91 ~~v~~~~~~~~~~-~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~--~~~~~~~~~~~l~~~~~~--~~~g~v~i~d~ 164 (419)
..-..++|+|... .++.+-.-+....++|..+.+... +...+..- -.=.|||||.+|+....| ...|.|-+||.
T Consensus 68 aR~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~ 147 (366)
T COG3490 68 ARGHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDA 147 (366)
T ss_pred cccCCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEec
Confidence 3445688888654 455665555567889998866554 33222222 345799999999886544 34578999999
Q ss_pred cC-CeEEEEEeccccceeeeeECCCCCeEEEEcCCC----------------CceEEEEcC-CCceEEEEeec--CCCCc
Q 014755 165 HT-WEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPL----------------EYKVLIYSP-DGRCLLKYQAY--ESGLG 224 (419)
Q Consensus 165 ~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~----------------~~~i~~~d~-~~~~~~~~~~~--~~~~~ 224 (419)
+. .+.+.++..|.-....+.+.+||+.+++.++.. .-.+.+.|. +|+++.+.... .+...
T Consensus 148 r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lS 227 (366)
T COG3490 148 REGFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLS 227 (366)
T ss_pred ccccceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhcc
Confidence 85 345566777777788999999999999876621 134566664 77766554433 33346
Q ss_pred eeEEEEccCCCeEEEEEec
Q 014755 225 VKSISWSPCGQFLAVGSYD 243 (419)
Q Consensus 225 v~~~~~s~~~~~l~~~~~d 243 (419)
+..++..+||..++.+-..
T Consensus 228 iRHld~g~dgtvwfgcQy~ 246 (366)
T COG3490 228 IRHLDIGRDGTVWFGCQYR 246 (366)
T ss_pred eeeeeeCCCCcEEEEEEee
Confidence 8888888888766655443
No 332
>KOG3621 consensus WD40 repeat-containing protein [General function prediction only]
Probab=98.71 E-value=1.1e-05 Score=72.21 Aligned_cols=205 Identities=8% Similarity=0.021 Sum_probs=119.5
Q ss_pred cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeec-CCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCe
Q 014755 46 CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDE-GLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTA 124 (419)
Q Consensus 46 ~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~ 124 (419)
+...|.--+++..+++++.|+.. |.+++|+-..++....-.+ ....+.....+++..++|+++..+ .|.++-+..+.
T Consensus 32 ~~~~v~lTc~dst~~~l~~GsS~-G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g-~V~v~ql~~~~ 109 (726)
T KOG3621|consen 32 FPARVKLTCVDATEEYLAMGSSA-GSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASG-RVSVFQLNKEL 109 (726)
T ss_pred CcceEEEEEeecCCceEEEeccc-ceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCc-eEEeehhhccC
Confidence 45566777778889999999976 8999999887765433222 334455666777777666666655 99999887633
Q ss_pred EEE-------eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCC----eEEEEEeccccceeeeeECCCCCeEE
Q 014755 125 CVH-------VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTW----EIMGVFAVDTLDLADIEWSPDDSAIV 193 (419)
Q Consensus 125 ~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~ 193 (419)
+.. -..|+..|++++|++++..+++|... |+|.+-.++.. -..+.+...+..|..+... ..+++
T Consensus 110 p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~---Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~--q~~LL 184 (726)
T KOG3621|consen 110 PRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQ---GKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYL--QSYLL 184 (726)
T ss_pred CCcceeeccccccCCceEEEEEecccccEEeecCCC---ceEEEEEechhhhhccccceeeccCcceEEeecc--cceeh
Confidence 221 12356788999999999999998764 88888777662 1122233334566666553 22333
Q ss_pred EEcCCCCceEEEEcCCCceEEEEeecCCCC-ceeEEEEccC----CCeEEEEEecCcEEEEEcC-Cceeeeeec
Q 014755 194 IWDSPLEYKVLIYSPDGRCLLKYQAYESGL-GVKSISWSPC----GQFLAVGSYDQTLRVLNHL-TWKTFAEFM 261 (419)
Q Consensus 194 ~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~v~~~~~s~~----~~~l~~~~~d~~i~v~d~~-~~~~~~~~~ 261 (419)
+. + --...+++...+.+..+......+ .-.+.+|-|. .+-.+.++.-| .|+|..+ .|+.+++..
T Consensus 185 VS--t-l~r~~Lc~tE~eti~QIG~k~R~~~~~~GACF~~g~~~~q~~~IycaRPG-~RlWead~~G~V~~Thq 254 (726)
T KOG3621|consen 185 VS--T-LTRCILCQTEAETITQIGKKPRKSLIDFGACFFPGQCKAQKPQIYCARPG-LRLWEADFAGEVIKTHQ 254 (726)
T ss_pred Hh--h-hhhhheeecchhHHHHhcCCCcCCccccceEEeeccccCCCceEEEecCC-CceEEeecceeEEEeee
Confidence 31 1 122334444222222221111111 1344555553 33344444443 6778764 355655554
No 333
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=98.70 E-value=6.3e-05 Score=63.68 Aligned_cols=226 Identities=13% Similarity=0.095 Sum_probs=137.2
Q ss_pred EcCCCCEEEEEeCCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceee---------
Q 014755 15 FSPNARYIAVAVDYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCK--------- 85 (419)
Q Consensus 15 ~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~--------- 85 (419)
....++.|+.|.++.+.+++...........+...|..+...|+-+.|++-+ | +.+.++++..-.....
T Consensus 3 ~~~~~~~L~vGt~~Gl~~~~~~~~~~~~~i~~~~~I~ql~vl~~~~~llvLs-d-~~l~~~~L~~l~~~~~~~~~~~~~~ 80 (275)
T PF00780_consen 3 ADSWGDRLLVGTEDGLYVYDLSDPSKPTRILKLSSITQLSVLPELNLLLVLS-D-GQLYVYDLDSLEPVSTSAPLAFPKS 80 (275)
T ss_pred cccCCCEEEEEECCCEEEEEecCCccceeEeecceEEEEEEecccCEEEEEc-C-CccEEEEchhhcccccccccccccc
Confidence 3456788999986669999994333333333444599999999888888876 4 7999999875543321
Q ss_pred -----eecCCccEeEEE--ECCCC-CEEEEEecCCCeEEEEEcCCC-----eEEEeccCCCCeeeEEEccCCCEEEEEee
Q 014755 86 -----IDEGLAGIAYAR--WSPDS-RHILTTSDFQLRLTVWSLLNT-----ACVHVQSPKHASKGVAFTQDGKFAAICTR 152 (419)
Q Consensus 86 -----~~~~~~~v~~~~--~~~~~-~~l~~~~~~~~~i~iwd~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 152 (419)
.......+...+ -...+ ..|+++. .+ .|.+|..... +..+-...+..+..++|. ++.++++..
T Consensus 81 ~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~-kk-~i~i~~~~~~~~~f~~~~ke~~lp~~~~~i~~~--~~~i~v~~~ 156 (275)
T PF00780_consen 81 RSLPTKLPETKGVSFFAVNGGHEGSRRLCVAV-KK-KILIYEWNDPRNSFSKLLKEISLPDPPSSIAFL--GNKICVGTS 156 (275)
T ss_pred ccccccccccCCeeEEeeccccccceEEEEEE-CC-EEEEEEEECCcccccceeEEEEcCCCcEEEEEe--CCEEEEEeC
Confidence 111223344444 11233 4444444 34 7888877652 233333344677888888 567777765
Q ss_pred cCCCCeEEEEeccCCeEEEEEeccc------------cceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEE--EEee
Q 014755 153 RDCKDYINLLSCHTWEIMGVFAVDT------------LDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLL--KYQA 218 (419)
Q Consensus 153 ~~~~g~v~i~d~~~~~~~~~~~~~~------------~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~--~~~~ 218 (419)
....+.|+.++.....+.... .++..+.. +++.+|++. +..-.+.|..|+..+ .+.-
T Consensus 157 ----~~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~Ll~~----~~~g~fv~~~G~~~r~~~i~W 227 (275)
T PF00780_consen 157 ----KGFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQL-SDNEFLLCY----DNIGVFVNKNGEPSRKSTIQW 227 (275)
T ss_pred ----CceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEe-CCceEEEEe----cceEEEEcCCCCcCcccEEEc
Confidence 378999999766544432211 12222333 345666552 334455566666554 2221
Q ss_pred cCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeec
Q 014755 219 YESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 219 ~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 261 (419)
.. .+.++++. ..+|+.... +.|.||++.+++.++.+.
T Consensus 228 -~~--~p~~~~~~--~pyli~~~~-~~iEV~~~~~~~lvQ~i~ 264 (275)
T PF00780_consen 228 -SS--APQSVAYS--SPYLIAFSS-NSIEVRSLETGELVQTIP 264 (275)
T ss_pred -CC--chhEEEEE--CCEEEEECC-CEEEEEECcCCcEEEEEE
Confidence 11 46667663 347777665 469999999999988886
No 334
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.69 E-value=3e-06 Score=70.54 Aligned_cols=94 Identities=10% Similarity=-0.006 Sum_probs=71.9
Q ss_pred EEEEEccCCcceeeeecCCccEeEEEECCCCC-EEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEE
Q 014755 72 IQAWSLTQPEWTCKIDEGLAGIAYARWSPDSR-HILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAIC 150 (419)
Q Consensus 72 i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 150 (419)
++..+..+-+....+..+...|..++|+|..+ .+..++.+. .|+|.|+++...+........+.+++|.-|....+.+
T Consensus 175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~n-kiki~dlet~~~vssy~a~~~~wSC~wDlde~h~IYa 253 (463)
T KOG1645|consen 175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGN-KIKIMDLETSCVVSSYIAYNQIWSCCWDLDERHVIYA 253 (463)
T ss_pred eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCc-eEEEEecccceeeeheeccCCceeeeeccCCcceeEE
Confidence 56666666555555666777899999999887 456666666 9999999998887733444888999999988766666
Q ss_pred eecCCCCeEEEEeccCCe
Q 014755 151 TRRDCKDYINLLSCHTWE 168 (419)
Q Consensus 151 ~~~~~~g~v~i~d~~~~~ 168 (419)
+.. +|.|.+||++..+
T Consensus 254 Gl~--nG~VlvyD~R~~~ 269 (463)
T KOG1645|consen 254 GLQ--NGMVLVYDMRQPE 269 (463)
T ss_pred ecc--CceEEEEEccCCC
Confidence 654 4899999998743
No 335
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=98.68 E-value=0.00025 Score=63.95 Aligned_cols=199 Identities=12% Similarity=0.124 Sum_probs=113.4
Q ss_pred eeEEEEecCCCeEEEEeccCC----eEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecC----------CCeE
Q 014755 50 ISYIEWALDSEYILCGLYKRL----MIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDF----------QLRL 115 (419)
Q Consensus 50 v~~~~~s~~~~~l~~~~~~~g----~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----------~~~i 115 (419)
+....+||||+++|.+-...| .++++|+++++.+....... ....+.|.++++.++....+ ...|
T Consensus 126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~-~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v 204 (414)
T PF02897_consen 126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP-KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQV 204 (414)
T ss_dssp EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE-ESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEE
T ss_pred eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc-ccceEEEeCCCCEEEEEEeCcccccccCCCCcEE
Confidence 346789999999997754333 69999999997654322211 12239999999988777532 2258
Q ss_pred EEEEcCCCeE---EEeccCCCC--eeeEEEccCCCEEEEEeecCCC-CeEEEEeccCC----eEEEEEeccccce-eeee
Q 014755 116 TVWSLLNTAC---VHVQSPKHA--SKGVAFTQDGKFAAICTRRDCK-DYINLLSCHTW----EIMGVFAVDTLDL-ADIE 184 (419)
Q Consensus 116 ~iwd~~~~~~---~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~-g~v~i~d~~~~----~~~~~~~~~~~~v-~~~~ 184 (419)
+.|.+.+... +.+...... ...+..++|+++++........ ..+++.++..+ .....+......+ ..+.
T Consensus 205 ~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v~ 284 (414)
T PF02897_consen 205 YRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYVD 284 (414)
T ss_dssp EEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEEE
T ss_pred EEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEEE
Confidence 8888877432 223333332 4678899999999887766544 57899998874 2233333333333 3343
Q ss_pred ECCCCCeEEEEc-CCCCceEEEEcC-CCc---eEEEEeecCCCCceeEEEEccCCCeEEEEE-ecC--cEEEEEcC
Q 014755 185 WSPDDSAIVIWD-SPLEYKVLIYSP-DGR---CLLKYQAYESGLGVKSISWSPCGQFLAVGS-YDQ--TLRVLNHL 252 (419)
Q Consensus 185 ~~~~~~~l~~~~-~~~~~~i~~~d~-~~~---~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~--~i~v~d~~ 252 (419)
.. .+.+++..+ ....+.|...++ +.. ....+..+.....+..+.. .+.+|+... .++ .|+++++.
T Consensus 285 ~~-~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~--~~~~Lvl~~~~~~~~~l~v~~~~ 357 (414)
T PF02897_consen 285 HH-GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSL--FKDYLVLSYRENGSSRLRVYDLD 357 (414)
T ss_dssp EE-TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEE--ETTEEEEEEEETTEEEEEEEETT
T ss_pred cc-CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEE--ECCEEEEEEEECCccEEEEEECC
Confidence 33 444444433 233477888888 332 1223433333223444444 444555443 333 58888987
No 336
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.68 E-value=7.8e-08 Score=53.75 Aligned_cols=38 Identities=45% Similarity=0.866 Sum_probs=34.6
Q ss_pred ceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEE
Q 014755 211 RCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLN 250 (419)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d 250 (419)
+++..+..|.. .|++++|+|++++|++++.|+.|++||
T Consensus 2 ~~~~~~~~h~~--~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSS--SINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSS--SEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCC--cEEEEEEecccccceeeCCCCEEEEEC
Confidence 56778888777 899999999999999999999999997
No 337
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.65 E-value=3e-06 Score=70.58 Aligned_cols=225 Identities=11% Similarity=0.044 Sum_probs=126.6
Q ss_pred EEEEecCCCcEEEEee-cCcceeEEEEecCCC-eEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEE
Q 014755 30 LVVRDAHSFKVVQLFS-CLDKISYIEWALDSE-YILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILT 107 (419)
Q Consensus 30 i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~-~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 107 (419)
++..+..+.+..+.+. +...|..++|||..+ ++..++.+ ..|+|.|+++...+.....+ ..+++++|.-|....+.
T Consensus 175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~-nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IY 252 (463)
T KOG1645|consen 175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLG-NKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIY 252 (463)
T ss_pred eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccC-ceEEEEecccceeeeheecc-CCceeeeeccCCcceeE
Confidence 4444444444444333 667899999999877 56667766 69999999998887777666 78999999999888888
Q ss_pred EecCCCeEEEEEcCCCeEEE--ec--cCCCCeeeEEE------ccCCCEEEEEeecCCCCeEEEEeccC--CeEEEEEec
Q 014755 108 TSDFQLRLTVWSLLNTACVH--VQ--SPKHASKGVAF------TQDGKFAAICTRRDCKDYINLLSCHT--WEIMGVFAV 175 (419)
Q Consensus 108 ~~~~~~~i~iwd~~~~~~~~--~~--~~~~~~~~~~~------~~~~~~l~~~~~~~~~g~v~i~d~~~--~~~~~~~~~ 175 (419)
+|..+|.|.+||++..+-.. +. ....++..++. .+-+..++.... .+..|++.. +.....++.
T Consensus 253 aGl~nG~VlvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt-----~l~f~ei~~s~~~~p~vlel 327 (463)
T KOG1645|consen 253 AGLQNGMVLVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALT-----VLQFYEIVFSAECLPCVLEL 327 (463)
T ss_pred EeccCceEEEEEccCCCchHhhhhhhhccCcceeecccCccccccccceEEeeeh-----hhhhhhhhccccCCCccccc
Confidence 88777799999999754332 11 12233333332 233444544443 355565532 111221221
Q ss_pred -cccceeeeeECCCCCeEEEEcCCCC-----ceEEE--EcCCCceEEEEeecC-CC-----CceeEEEEccCCCeEEE-E
Q 014755 176 -DTLDLADIEWSPDDSAIVIWDSPLE-----YKVLI--YSPDGRCLLKYQAYE-SG-----LGVKSISWSPCGQFLAV-G 240 (419)
Q Consensus 176 -~~~~v~~~~~~~~~~~l~~~~~~~~-----~~i~~--~d~~~~~~~~~~~~~-~~-----~~v~~~~~s~~~~~l~~-~ 240 (419)
..+.+.++.+.+-.+.+++.-.... ..+-. -+.+|..+....... +. ..-..+.-.++.++|+. +
T Consensus 328 e~pG~cismqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~t~~ai~~~~~nn~iv~~g 407 (463)
T KOG1645|consen 328 EPPGICISMQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLSTTQAIRAVEDNNYIVVVG 407 (463)
T ss_pred CCCcceeeeeecCccceEEEEecCCCCCccceeeeeeeccccCceeeeecccccCCcccccccccceeccccccEEEEec
Confidence 2345556666665555544211100 11111 111443332221110 00 00111222345555544 4
Q ss_pred EecCcEEEEEcCCceeeeeec
Q 014755 241 SYDQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 241 ~~d~~i~v~d~~~~~~~~~~~ 261 (419)
...+.+.+||..+++.++++.
T Consensus 408 d~tn~lil~D~~s~evvQ~l~ 428 (463)
T KOG1645|consen 408 DSTNELILQDPHSFEVVQTLA 428 (463)
T ss_pred CCcceeEEeccchhheeeecc
Confidence 455789999999998888876
No 338
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=98.63 E-value=0.00012 Score=61.85 Aligned_cols=218 Identities=14% Similarity=0.060 Sum_probs=135.6
Q ss_pred eEEcCCCCEEEEEe--CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecC-
Q 014755 13 SCFSPNARYIAVAV--DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEG- 89 (419)
Q Consensus 13 ~~~s~d~~~la~~~--~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~- 89 (419)
-.|.|+...|..+. .+.|.-|+..+++... +.+.+.+.++..-..+..|+++. .-+.+++.+++..+..+...
T Consensus 30 P~w~~~~~~L~w~DI~~~~i~r~~~~~g~~~~-~~~p~~~~~~~~~d~~g~Lv~~~---~g~~~~~~~~~~~~t~~~~~~ 105 (307)
T COG3386 30 PVWDPDRGALLWVDILGGRIHRLDPETGKKRV-FPSPGGFSSGALIDAGGRLIACE---HGVRLLDPDTGGKITLLAEPE 105 (307)
T ss_pred ccCcCCCCEEEEEeCCCCeEEEecCCcCceEE-EECCCCcccceeecCCCeEEEEc---cccEEEeccCCceeEEecccc
Confidence 46788888777775 7779999988775443 44455566666655565666653 24788888766553333221
Q ss_pred ----CccEeEEEECCCCCEEEEEec----------CCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecC
Q 014755 90 ----LAGIAYARWSPDSRHILTTSD----------FQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRD 154 (419)
Q Consensus 90 ----~~~v~~~~~~~~~~~l~~~~~----------~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~ 154 (419)
....+.....|+|.+.+.... ..|.++.+|. .+..++ +..+-...+.++||||++.++.+...
T Consensus 106 ~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~- 183 (307)
T COG3386 106 DGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTP- 183 (307)
T ss_pred CCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEEecCceEECCCCCEEEEEeCC-
Confidence 134567888999987766543 1234444444 344444 33334445899999999988887654
Q ss_pred CCCeEEEEeccC--C----e-EEEEEeccccceeeeeECCCCCeEEEEcCCCC-ceEEEEcCCCceEEEEeecCCCCcee
Q 014755 155 CKDYINLLSCHT--W----E-IMGVFAVDTLDLADIEWSPDDSAIVIWDSPLE-YKVLIYSPDGRCLLKYQAYESGLGVK 226 (419)
Q Consensus 155 ~~g~v~i~d~~~--~----~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~-~~i~~~d~~~~~~~~~~~~~~~~~v~ 226 (419)
.+.|+-|++.. + + .........+..-.++...+|.+.+. ...+ +.|.+|+.+|+++..+..... .++
T Consensus 184 -~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~--a~~~g~~v~~~~pdG~l~~~i~lP~~--~~t 258 (307)
T COG3386 184 -ANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVA--AVWGGGRVVRFNPDGKLLGEIKLPVK--RPT 258 (307)
T ss_pred -CCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEe--cccCCceEEEECCCCcEEEEEECCCC--CCc
Confidence 36788877752 1 1 11122223455566677777776643 2223 499999999999998887643 688
Q ss_pred EEEEc-cCCCeEEEEE
Q 014755 227 SISWS-PCGQFLAVGS 241 (419)
Q Consensus 227 ~~~~s-~~~~~l~~~~ 241 (419)
+++|- |+.+.|...+
T Consensus 259 ~~~FgG~~~~~L~iTs 274 (307)
T COG3386 259 NPAFGGPDLNTLYITS 274 (307)
T ss_pred cceEeCCCcCEEEEEe
Confidence 88885 3444444433
No 339
>KOG4714 consensus Nucleoporin [Nuclear structure]
Probab=98.62 E-value=6.5e-07 Score=69.98 Aligned_cols=192 Identities=14% Similarity=0.094 Sum_probs=106.9
Q ss_pred eeEEEccCCCEEEEEeecCCCCeEEEEeccCCe-EEEEEeccccceeeeeECCCCCeEEEEc---CCCCceEEEEcCCCc
Q 014755 136 KGVAFTQDGKFAAICTRRDCKDYINLLSCHTWE-IMGVFAVDTLDLADIEWSPDDSAIVIWD---SPLEYKVLIYSPDGR 211 (419)
Q Consensus 136 ~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~~~~~i~~~d~~~~ 211 (419)
.+-+.+..+..++++..| |.+.+++.+.-. ...++......-.+.+....+..+.... ...-+..+.|++...
T Consensus 93 p~~~~s~~~t~V~~~~~d---g~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~ 169 (319)
T KOG4714|consen 93 PNDACTMTDNRVCIGYAD---GSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPI 169 (319)
T ss_pred CcccccccCCceEecCCC---ceEEEEechHHHhhhhhcccccccccccceeecccEEecCCcceEeeccceeeeccccc
Confidence 333444456678888776 788888876511 1111111111111122223344333200 011245566666221
Q ss_pred eEEEEeecCCCCceeEEEEccCC-CeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeee
Q 014755 212 CLLKYQAYESGLGVKSISWSPCG-QFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELC 290 (419)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (419)
..... .+.....|.+++-+|.. ..+++|+.||.+.+||.+.......
T Consensus 170 ~t~~~-~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S------------------------------- 217 (319)
T KOG4714|consen 170 KTLIP-SKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVS------------------------------- 217 (319)
T ss_pred ccccc-cccccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHH-------------------------------
Confidence 11111 11111258999999965 4667788899999999876422111
Q ss_pred ccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEcc-CCeEEEEecCCCCceEEEeeccCCCc
Q 014755 291 LNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSS-DSQYICTRNDSMPTTLWIWDICRQEP 369 (419)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~d~~~~i~iwd~~~~~~ 369 (419)
.+..|+.++..+-|+| ++..|+++++| |.+.-||..+. +
T Consensus 218 -------------------------------------~l~ahk~~i~eV~FHpk~p~~Lft~sed--Gslw~wdas~~-~ 257 (319)
T KOG4714|consen 218 -------------------------------------LLKAHKAEIWEVHFHPKNPEHLFTCSED--GSLWHWDASTT-F 257 (319)
T ss_pred -------------------------------------HHHHhhhhhhheeccCCCchheeEecCC--CcEEEEcCCCc-e
Confidence 1235788889999998 56789999999 99999997741 1
Q ss_pred eeec----------------------c----cCCCeeEEEeCCCCCeEEEEeCCCcEEEee
Q 014755 370 AAIL----------------------V----QKDPIRAATWDPTCTRLVLCTGSSHLYMWT 404 (419)
Q Consensus 370 ~~~~----------------------~----~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~ 404 (419)
+..- + ....|++ |.--|..|++|++-+.|++++
T Consensus 258 l~i~~~~s~~s~WLsgD~v~s~i~i~~ll~~~~~Sins--fDV~g~~lVcgtd~eaIyl~~ 316 (319)
T KOG4714|consen 258 LSISNQASVISSWLSGDPVKSRIEITSLLPSRSLSINS--FDVLGPCLVCGTDAEAIYLTR 316 (319)
T ss_pred EEecCccccccccccCCcccceEeeeccccccceeeee--eeccCceEEeccccceEEEec
Confidence 1110 0 1112233 333567889888888888865
No 340
>KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair]
Probab=98.61 E-value=1.8e-06 Score=79.26 Aligned_cols=180 Identities=11% Similarity=0.100 Sum_probs=130.0
Q ss_pred CCCEEEEEe-CCeEEEEecCCCcEEEEeecCc-ceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeE
Q 014755 18 NARYIAVAV-DYRLVVRDAHSFKVVQLFSCLD-KISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAY 95 (419)
Q Consensus 18 d~~~la~~~-~~~i~i~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~ 95 (419)
++..+..|+ ...+..+|+.+.+..+...-.. .|.-|+ .+++++.+|... |+|.+-|+.+.+.+.++..|.+.|.+
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR--~Nnr~lf~G~t~-G~V~LrD~~s~~~iht~~aHs~siSD 222 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMR--YNNRNLFCGDTR-GTVFLRDPNSFETIHTFDAHSGSISD 222 (1118)
T ss_pred CCcceeecchhhheeeeecccceeeeeeeccCCceEEEE--ecCcEEEeeccc-ceEEeecCCcCceeeeeeccccceee
Confidence 445566666 6678889999988877665332 444444 457888888765 99999999999999999999999876
Q ss_pred EEECCCCCEEEEEecCC--------CeEEEEEcCCCeEEE-eccCCCCeeeEEEccCC-CEEEEEeecCCCCeEEEEecc
Q 014755 96 ARWSPDSRHILTTSDFQ--------LRLTVWSLLNTACVH-VQSPKHASKGVAFTQDG-KFAAICTRRDCKDYINLLSCH 165 (419)
Q Consensus 96 ~~~~~~~~~l~~~~~~~--------~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~g~v~i~d~~ 165 (419)
+. -.|+.|+++|... .-|++||++.-+.+. +..+.. ..-+.|.|.- ..+++++.. |...+.|..
T Consensus 223 fD--v~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~-P~flrf~Psl~t~~~V~S~s---Gq~q~vd~~ 296 (1118)
T KOG1275|consen 223 FD--VQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYG-PQFLRFHPSLTTRLAVTSQS---GQFQFVDTA 296 (1118)
T ss_pred ee--ccCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccC-chhhhhcccccceEEEEecc---cceeecccc
Confidence 65 4788999997422 158999999866555 333322 2566777764 566666665 788888843
Q ss_pred C---C-eEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC
Q 014755 166 T---W-EIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP 208 (419)
Q Consensus 166 ~---~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~ 208 (419)
+ . ..+..+......+..+.++++++.+++ +..+|.|.+|..
T Consensus 297 ~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alaf--gd~~g~v~~wa~ 341 (1118)
T KOG1275|consen 297 TLSNPPAGVKMVNPNGSGISAFDISSNGDALAF--GDHEGHVNLWAD 341 (1118)
T ss_pred ccCCCccceeEEccCCCcceeEEecCCCceEEE--ecccCcEeeecC
Confidence 3 2 223334444556999999999999999 666899999975
No 341
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.61 E-value=9.3e-06 Score=71.52 Aligned_cols=72 Identities=10% Similarity=0.128 Sum_probs=61.9
Q ss_pred CCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 332 PKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 332 ~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
....|.+.+++|+...++.|..| |.|.+||...+.- ......-.++.++|+|+|.++++|+..|.+.+||+.
T Consensus 258 L~s~v~~ca~sp~E~kLvlGC~D--gSiiLyD~~~~~t-~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~A 329 (545)
T PF11768_consen 258 LPSQVICCARSPSEDKLVLGCED--GSIILYDTTRGVT-LLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMA 329 (545)
T ss_pred cCCcceEEecCcccceEEEEecC--CeEEEEEcCCCee-eeeeecccceEEEEcCCCcEEEEEcCCceEEEEEee
Confidence 34558999999999999999999 9999999876532 233456678999999999999999999999999997
No 342
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=98.59 E-value=4.6e-05 Score=67.78 Aligned_cols=176 Identities=11% Similarity=0.160 Sum_probs=96.5
Q ss_pred cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEE-EcCCCe
Q 014755 46 CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVW-SLLNTA 124 (419)
Q Consensus 46 ~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iw-d~~~~~ 124 (419)
..-....++++|+|+++++++ + |...|+.....+.. ..+.-....|.+.++ +++-.... .|.++ +++...
T Consensus 31 ~~~~p~~ls~npngr~v~V~g-~-geY~iyt~~~~r~k-----~~G~g~~~vw~~~n~-yAv~~~~~-~I~I~kn~~~~~ 101 (443)
T PF04053_consen 31 CEIYPQSLSHNPNGRFVLVCG-D-GEYEIYTALAWRNK-----AFGSGLSFVWSSRNR-YAVLESSS-TIKIYKNFKNEV 101 (443)
T ss_dssp -SS--SEEEE-TTSSEEEEEE-T-TEEEEEETTTTEEE-----EEEE-SEEEE-TSSE-EEEE-TTS--EEEEETTEE-T
T ss_pred CCcCCeeEEECCCCCEEEEEc-C-CEEEEEEccCCccc-----ccCceeEEEEecCcc-EEEEECCC-eEEEEEcCcccc
Confidence 445678999999999999965 4 78888884332221 123456788998555 55555444 88886 332222
Q ss_pred EEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEE
Q 014755 125 CVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVL 204 (419)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~ 204 (419)
...+. .+..+..+-. |..|...+. +.|.+||..+++.++.+... +|..+.|++++.++++. + +..++
T Consensus 102 ~k~i~-~~~~~~~If~---G~LL~~~~~----~~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~--t-~~~i~ 168 (443)
T PF04053_consen 102 VKSIK-LPFSVEKIFG---GNLLGVKSS----DFICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALV--T-KDSIY 168 (443)
T ss_dssp T------SS-EEEEE----SSSEEEEET----TEEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE----S-SEE
T ss_pred ceEEc-CCcccceEEc---CcEEEEECC----CCEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEE--e-CCeEE
Confidence 11111 1122333322 888877765 47999999999999988764 38999999999999984 2 56777
Q ss_pred EEcCCCc------------eEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEE
Q 014755 205 IYSPDGR------------CLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRV 248 (419)
Q Consensus 205 ~~d~~~~------------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v 248 (419)
+++.+.+ .+..+..... .|.+.+|..+ .++..+.. .++.
T Consensus 169 il~~~~~~~~~~~~~g~e~~f~~~~E~~~--~IkSg~W~~d--~fiYtT~~-~lkY 219 (443)
T PF04053_consen 169 ILKYNLEAVAAIPEEGVEDAFELIHEISE--RIKSGCWVED--CFIYTTSN-HLKY 219 (443)
T ss_dssp EEEE-HHHHHHBTTTB-GGGEEEEEEE-S----SEEEEETT--EEEEE-TT-EEEE
T ss_pred EEEecchhcccccccCchhceEEEEEecc--eeEEEEEEcC--EEEEEcCC-eEEE
Confidence 7776443 4444433122 6888888765 44444433 5554
No 343
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.58 E-value=9.3e-06 Score=74.33 Aligned_cols=198 Identities=10% Similarity=0.091 Sum_probs=129.4
Q ss_pred EEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCcc-EeEEEECCCCCEEEEEecCCC----eEEEEEcCC------
Q 014755 54 EWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAG-IAYARWSPDSRHILTTSDFQL----RLTVWSLLN------ 122 (419)
Q Consensus 54 ~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~~~~----~i~iwd~~~------ 122 (419)
+|++.+..++.|+.+ |.|.+.+- .-+..+.+..+... |..+-...+..+|++.+.|+. .+++|+++.
T Consensus 30 c~~s~~~~vvigt~~-G~V~~Ln~-s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~s 107 (933)
T KOG2114|consen 30 CCSSSTGSVVIGTAD-GRVVILNS-SFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNS 107 (933)
T ss_pred EEcCCCceEEEeecc-ccEEEecc-cceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCC
Confidence 467888899999876 77777662 22333556666666 444433334467888887765 699999874
Q ss_pred CeEE---Eecc-----CCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC----CeEEEEEeccccceeeeeECCCCC
Q 014755 123 TACV---HVQS-----PKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT----WEIMGVFAVDTLDLADIEWSPDDS 190 (419)
Q Consensus 123 ~~~~---~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~----~~~~~~~~~~~~~v~~~~~~~~~~ 190 (419)
.++. ++.. .+.++.+++.+.+-+.+|+|-.+ |.|..+.-+- +...........+|+.+++..+++
T Consensus 108 P~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~n---G~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~ 184 (933)
T KOG2114|consen 108 PQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTN---GLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGK 184 (933)
T ss_pred cceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecC---cEEEEEcCcchhccccceeeeccCCCCceeeEEecCCc
Confidence 2233 2222 24556899999998889988876 8888885321 222222333467899999999998
Q ss_pred eEEEEcCCCCceEEEEcCCCce--EEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeec
Q 014755 191 AIVIWDSPLEYKVLIYSPDGRC--LLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 191 ~l~~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 261 (419)
.+++ ..+...|.+|.++|+. ...+..++ ..+.|.++++....+++++. ..+.+|+....++-..+.
T Consensus 185 s~lF--v~Tt~~V~~y~l~gr~p~~~~ld~~G--~~lnCss~~~~t~qfIca~~-e~l~fY~sd~~~~cfaf~ 252 (933)
T KOG2114|consen 185 SVLF--VATTEQVMLYSLSGRTPSLKVLDNNG--ISLNCSSFSDGTYQFICAGS-EFLYFYDSDGRGPCFAFE 252 (933)
T ss_pred eeEE--EEecceeEEEEecCCCcceeeeccCC--ccceeeecCCCCccEEEecC-ceEEEEcCCCcceeeeec
Confidence 8433 2335689999996665 33344333 37888888876654555554 379999987665555543
No 344
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=98.58 E-value=4.1e-05 Score=68.07 Aligned_cols=217 Identities=12% Similarity=0.079 Sum_probs=117.1
Q ss_pred cCeEEcCCCCEEEEEeCCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCC
Q 014755 11 GPSCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGL 90 (419)
Q Consensus 11 ~~~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~ 90 (419)
..++++|+|+++++++++.-.|+.....+... .+.-....|.+.++ +|+-... ++|.|+.--+.+....+...
T Consensus 36 ~~ls~npngr~v~V~g~geY~iyt~~~~r~k~----~G~g~~~vw~~~n~-yAv~~~~-~~I~I~kn~~~~~~k~i~~~- 108 (443)
T PF04053_consen 36 QSLSHNPNGRFVLVCGDGEYEIYTALAWRNKA----FGSGLSFVWSSRNR-YAVLESS-STIKIYKNFKNEVVKSIKLP- 108 (443)
T ss_dssp SEEEE-TTSSEEEEEETTEEEEEETTTTEEEE----EEE-SEEEE-TSSE-EEEE-TT-S-EEEEETTEE-TT-----S-
T ss_pred eeEEECCCCCEEEEEcCCEEEEEEccCCcccc----cCceeEEEEecCcc-EEEEECC-CeEEEEEcCccccceEEcCC-
Confidence 34899999999999999999999855444332 23456788998665 4444434 68999643222222233222
Q ss_pred ccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCC---
Q 014755 91 AGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTW--- 167 (419)
Q Consensus 91 ~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~--- 167 (419)
..+..+-. |..|...+.+ .|.+||.++++.++..... ++..+.|++++++++..+.+ .+.+++.+..
T Consensus 109 ~~~~~If~---G~LL~~~~~~--~i~~yDw~~~~~i~~i~v~-~vk~V~Ws~~g~~val~t~~----~i~il~~~~~~~~ 178 (443)
T PF04053_consen 109 FSVEKIFG---GNLLGVKSSD--FICFYDWETGKLIRRIDVS-AVKYVIWSDDGELVALVTKD----SIYILKYNLEAVA 178 (443)
T ss_dssp S-EEEEE----SSSEEEEETT--EEEEE-TTT--EEEEESS--E-EEEEE-TTSSEEEEE-S-----SEEEEEE-HHHHH
T ss_pred cccceEEc---CcEEEEECCC--CEEEEEhhHcceeeEEecC-CCcEEEEECCCCEEEEEeCC----eEEEEEecchhcc
Confidence 22333322 8877777653 7999999999888833222 38999999999999999875 7777765432
Q ss_pred --------eEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEE
Q 014755 168 --------EIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAV 239 (419)
Q Consensus 168 --------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 239 (419)
.....+..-...|.+..|..+ .++.. + ...++.+- .|. ...+..... ++.=+.+.|..+.+..
T Consensus 179 ~~~~~g~e~~f~~~~E~~~~IkSg~W~~d--~fiYt--T-~~~lkYl~-~Ge-~~~i~~ld~--~~yllgy~~~~~~ly~ 249 (443)
T PF04053_consen 179 AIPEEGVEDAFELIHEISERIKSGCWVED--CFIYT--T-SNHLKYLV-NGE-TGIIAHLDK--PLYLLGYLPKENRLYL 249 (443)
T ss_dssp HBTTTB-GGGEEEEEEE-S--SEEEEETT--EEEEE----TTEEEEEE-TTE-EEEEEE-SS----EEEEEETTTTEEEE
T ss_pred cccccCchhceEEEEEecceeEEEEEEcC--EEEEE--c-CCeEEEEE-cCC-cceEEEcCC--ceEEEEEEccCCEEEE
Confidence 022222222467888899766 33331 2 22665521 333 223322233 5666777777778888
Q ss_pred EEecCcEEEEEcCC
Q 014755 240 GSYDQTLRVLNHLT 253 (419)
Q Consensus 240 ~~~d~~i~v~d~~~ 253 (419)
...|+.+..+.+..
T Consensus 250 ~Dr~~~v~~~~ld~ 263 (443)
T PF04053_consen 250 IDRDGNVISYELDL 263 (443)
T ss_dssp E-TT--EEEEE--H
T ss_pred EECCCCEEEEEECH
Confidence 88888888887653
No 345
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=98.57 E-value=0.00023 Score=63.31 Aligned_cols=205 Identities=12% Similarity=0.119 Sum_probs=104.3
Q ss_pred eEEcCCCCEEEEEeCC------------eEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC
Q 014755 13 SCFSPNARYIAVAVDY------------RLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP 80 (419)
Q Consensus 13 ~~~s~d~~~la~~~~~------------~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~ 80 (419)
++.+|.|--||...+. .|.||+..+..+....-..+.+.++.|+.+..+++.. .+ |.++++|+...
T Consensus 34 va~a~~gGpIAi~~d~~k~~~~~~~~p~~I~iys~sG~ll~~i~w~~~~iv~~~wt~~e~LvvV~-~d-G~v~vy~~~G~ 111 (410)
T PF04841_consen 34 VAVAPYGGPIAIIRDESKLVPVGSAKPNSIQIYSSSGKLLSSIPWDSGRIVGMGWTDDEELVVVQ-SD-GTVRVYDLFGE 111 (410)
T ss_pred EEEcCCCceEEEEecCcccccccCCCCcEEEEECCCCCEeEEEEECCCCEEEEEECCCCeEEEEE-cC-CEEEEEeCCCc
Confidence 6778888888877655 5889987655443322233899999999876665555 35 99999998633
Q ss_pred cceeeee-------cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCe-EEE-eccCCCCee----------eEEEc
Q 014755 81 EWTCKID-------EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTA-CVH-VQSPKHASK----------GVAFT 141 (419)
Q Consensus 81 ~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~-~~~-~~~~~~~~~----------~~~~~ 141 (419)
. ...+. -....+....+..+|-.+++ .+. .+.+..--... ..+ +........ ...++
T Consensus 112 ~-~fsl~~~i~~~~v~e~~i~~~~~~~~GivvLt--~~~-~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~ 187 (410)
T PF04841_consen 112 F-QFSLGEEIEEEKVLECRIFAIWFYKNGIVVLT--GNN-RFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLS 187 (410)
T ss_pred e-eechhhhccccCcccccccccccCCCCEEEEC--CCC-eEEEEeCccccchhhccccCCCcccccccccccccceEee
Confidence 2 11111 11111222333445533332 333 44333221211 111 111111000 11233
Q ss_pred cCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCC-ceEEEEeecC
Q 014755 142 QDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDG-RCLLKYQAYE 220 (419)
Q Consensus 142 ~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~-~~~~~~~~~~ 220 (419)
.+....+....+ +.+.+.+-...+. +. ..+++..++.||+++++++. ..+|.+.+.+.+- +.+..+....
T Consensus 188 ~~~~~~i~~~~g---~~i~~i~~~~~~~---i~-~~~~i~~iavSpng~~iAl~--t~~g~l~v~ssDf~~~~~e~~~~~ 258 (410)
T PF04841_consen 188 SDRVVEILLANG---ETIYIIDENSFKQ---ID-SDGPIIKIAVSPNGKFIALF--TDSGNLWVVSSDFSEKLCEFDTDS 258 (410)
T ss_pred cCcceEEEEecC---CEEEEEEcccccc---cc-CCCCeEEEEECCCCCEEEEE--ECCCCEEEEECcccceeEEeecCc
Confidence 333333333222 3444333222111 11 23679999999999999995 4468888887632 3333343331
Q ss_pred CCCceeEEEEccC
Q 014755 221 SGLGVKSISWSPC 233 (419)
Q Consensus 221 ~~~~v~~~~~s~~ 233 (419)
......+.|.-+
T Consensus 259 -~~~p~~~~WCG~ 270 (410)
T PF04841_consen 259 -KSPPKQMAWCGN 270 (410)
T ss_pred -CCCCcEEEEECC
Confidence 124567777544
No 346
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.57 E-value=6.7e-05 Score=68.98 Aligned_cols=189 Identities=15% Similarity=0.218 Sum_probs=125.1
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEe-ecCcc-eeEEEEecCCCeEEEEeccCC----eEEEEEccCC-----
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLF-SCLDK-ISYIEWALDSEYILCGLYKRL----MIQAWSLTQP----- 80 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~-~~~~~-v~~~~~s~~~~~l~~~~~~~g----~i~iw~~~~~----- 80 (419)
-++++.+..+|.|+ +|.|.+.+-. .+..+-+ .+... |..+-...+..+|++.+.|++ .++||+++.-
T Consensus 29 sc~~s~~~~vvigt~~G~V~~Ln~s-~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~s 107 (933)
T KOG2114|consen 29 SCCSSSTGSVVIGTADGRVVILNSS-FQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNS 107 (933)
T ss_pred eEEcCCCceEEEeeccccEEEeccc-ceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCC
Confidence 46899999999998 8888888743 2332322 34444 444444444467888777655 7999999743
Q ss_pred -cce--eeeec-----CCccEeEEEECCCCCEEEEEecCCCeEEEEEcC--C--CeEEE-eccCCCCeeeEEEccCCCE-
Q 014755 81 -EWT--CKIDE-----GLAGIAYARWSPDSRHILTTSDFQLRLTVWSLL--N--TACVH-VQSPKHASKGVAFTQDGKF- 146 (419)
Q Consensus 81 -~~~--~~~~~-----~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~--~--~~~~~-~~~~~~~~~~~~~~~~~~~- 146 (419)
.+. .++.+ ...++.+++.+.+-+.++.|-.+| .|..+.-. . +.... ....+.+|+++++..+++.
T Consensus 108 P~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG-~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~ 186 (933)
T KOG2114|consen 108 PQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNG-LVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSV 186 (933)
T ss_pred cceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCc-EEEEEcCcchhccccceeeeccCCCCceeeEEecCCcee
Confidence 122 12222 235688899999988777776666 88877432 1 22222 4456678999999999876
Q ss_pred EEEEeecCCCCeEEEEeccCCeE-EEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCC
Q 014755 147 AAICTRRDCKDYINLLSCHTWEI-MGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDG 210 (419)
Q Consensus 147 l~~~~~~~~~g~v~i~d~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~ 210 (419)
+.++.. ..|.+|.+....+ ...+..+...+.|..+++....+++ ..+..+++|+.++
T Consensus 187 lFv~Tt----~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIc---a~~e~l~fY~sd~ 244 (933)
T KOG2114|consen 187 LFVATT----EQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFIC---AGSEFLYFYDSDG 244 (933)
T ss_pred EEEEec----ceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEE---ecCceEEEEcCCC
Confidence 333333 4799999984442 4446777788999999887765655 2356789999854
No 347
>KOG3621 consensus WD40 repeat-containing protein [General function prediction only]
Probab=98.56 E-value=1.9e-05 Score=70.85 Aligned_cols=107 Identities=9% Similarity=0.104 Sum_probs=82.6
Q ss_pred EEcCCCCEEEEEe-CCeEEEEecCCCcEEEEee--cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceee-----
Q 014755 14 CFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFS--CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCK----- 85 (419)
Q Consensus 14 ~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~----- 85 (419)
+++..+++|+.|+ .|.+++|+-.+++...... ..+.+..+..|++..++|+|+.. |.|.++-+..+.....
T Consensus 40 c~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~-g~V~v~ql~~~~p~~~~~~t~ 118 (726)
T KOG3621|consen 40 CVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTAS-GRVSVFQLNKELPRDLDYVTP 118 (726)
T ss_pred EeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCC-ceEEeehhhccCCCcceeecc
Confidence 5788899999997 7889999988887665443 45567777888888888888754 8999998876432211
Q ss_pred e-ecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC
Q 014755 86 I-DEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN 122 (419)
Q Consensus 86 ~-~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~ 122 (419)
. ..|...|++++|++++..+++|...| .|..-.+..
T Consensus 119 ~d~~~~~rVTal~Ws~~~~k~ysGD~~G-kv~~~~L~s 155 (726)
T KOG3621|consen 119 CDKSHKCRVTALEWSKNGMKLYSGDSQG-KVVLTELDS 155 (726)
T ss_pred ccccCCceEEEEEecccccEEeecCCCc-eEEEEEech
Confidence 1 23567899999999999999998766 888887776
No 348
>KOG4714 consensus Nucleoporin [Nuclear structure]
Probab=98.55 E-value=2e-06 Score=67.30 Aligned_cols=163 Identities=8% Similarity=0.089 Sum_probs=100.7
Q ss_pred cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcc-eeeeecCCccEeEEEECCCCCEEEEEe-----cCCCeEEEEE
Q 014755 46 CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEW-TCKIDEGLAGIAYARWSPDSRHILTTS-----DFQLRLTVWS 119 (419)
Q Consensus 46 ~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~-----~~~~~i~iwd 119 (419)
|.++-.+-+.+-.+..++++..| |.+.+++.+.-.. ..++......-.+.+....++.+.+++ .-+ ..+.|+
T Consensus 88 ~sep~p~~~~s~~~t~V~~~~~d-g~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d-~~~a~~ 165 (319)
T KOG4714|consen 88 NSEIDPNDACTMTDNRVCIGYAD-GSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQD-NFYANT 165 (319)
T ss_pred cCCCCCcccccccCCceEecCCC-ceEEEEechHHHhhhhhcccccccccccceeecccEEecCCcceEeecc-ceeeec
Confidence 44444444444456678888766 8999998765211 111111111112223333444444432 112 567777
Q ss_pred cCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeE-EEEEeccccceeeeeECCC-CCeEEEEc
Q 014755 120 LLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEI-MGVFAVDTLDLADIEWSPD-DSAIVIWD 196 (419)
Q Consensus 120 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~-~~~~~~~~~~v~~~~~~~~-~~~l~~~~ 196 (419)
++..+... -......+.+++-+|..+.++.++.+ +|.+.+||.+.... ...+..|+.++..+-|+|. +..|++
T Consensus 166 ~~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~--dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft-- 241 (319)
T KOG4714|consen 166 LDPIKTLIPSKKALDAVTALCSHPAQQHLVCCGTD--DGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFT-- 241 (319)
T ss_pred ccccccccccccccccchhhhCCcccccEEEEecC--CCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeE--
Confidence 76544333 22233448899999988777666655 38999999988633 3446778999999999996 456666
Q ss_pred CCCCceEEEEcCCCceEE
Q 014755 197 SPLEYKVLIYSPDGRCLL 214 (419)
Q Consensus 197 ~~~~~~i~~~d~~~~~~~ 214 (419)
++.||.+..||.++..+.
T Consensus 242 ~sedGslw~wdas~~~l~ 259 (319)
T KOG4714|consen 242 CSEDGSLWHWDASTTFLS 259 (319)
T ss_pred ecCCCcEEEEcCCCceEE
Confidence 678999999999765544
No 349
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.54 E-value=0.00023 Score=56.29 Aligned_cols=196 Identities=11% Similarity=-0.022 Sum_probs=113.8
Q ss_pred EecCCCe-EEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCC
Q 014755 55 WALDSEY-ILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPK 132 (419)
Q Consensus 55 ~s~~~~~-l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~ 132 (419)
..+|.+. ++.|+. .+.+.-.|..+|+...+..- ...+.+-+.- -|.+++.+...+ .+++.+.++|+... +....
T Consensus 18 V~~dskT~v~igSH-s~~~~avd~~sG~~~We~il-g~RiE~sa~v-vgdfVV~GCy~g-~lYfl~~~tGs~~w~f~~~~ 93 (354)
T KOG4649|consen 18 VCNDSKTLVVIGSH-SGIVIAVDPQSGNLIWEAIL-GVRIECSAIV-VGDFVVLGCYSG-GLYFLCVKTGSQIWNFVILE 93 (354)
T ss_pred EecCCceEEEEecC-CceEEEecCCCCcEEeehhh-CceeeeeeEE-ECCEEEEEEccC-cEEEEEecchhheeeeeehh
Confidence 3444444 445554 47888889988876544321 1223222221 466788888776 89999999996555 33332
Q ss_pred CCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECC-CCCeEEEEcCCCCceEEEEcCCCc
Q 014755 133 HASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSP-DDSAIVIWDSPLEYKVLIYSPDGR 211 (419)
Q Consensus 133 ~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~i~~~d~~~~ 211 (419)
.--......+++..+..++.| ++.+..|.++...+...+.......+.+..| ++...+. ...|.+..-.....
T Consensus 94 ~vk~~a~~d~~~glIycgshd---~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~sly~a---~t~G~vlavt~~~~ 167 (354)
T KOG4649|consen 94 TVKVRAQCDFDGGLIYCGSHD---GNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLYAA---ITAGAVLAVTKNPY 167 (354)
T ss_pred hhccceEEcCCCceEEEecCC---CcEEEecccccceEEecccCCceeccceecCCCceEEEE---eccceEEEEccCCC
Confidence 222556678899999999987 8999999999888877666555555556666 3433332 22344444443111
Q ss_pred eEEEEeecCCCCceeEEEEcc--CCCeEEEEEecCcEEEEEcCCceeeeeecccc
Q 014755 212 CLLKYQAYESGLGVKSISWSP--CGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLS 264 (419)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~ 264 (419)
....+-.+.-..++.+ +| -+..+..+.-||.+.-++ ++|+.+..+....
T Consensus 168 ~~~~~w~~~~~~PiF~---splcv~~sv~i~~VdG~l~~f~-~sG~qvwr~~t~G 218 (354)
T KOG4649|consen 168 SSTEFWAATRFGPIFA---SPLCVGSSVIITTVDGVLTSFD-ESGRQVWRPATKG 218 (354)
T ss_pred CcceehhhhcCCcccc---CceeccceEEEEEeccEEEEEc-CCCcEEEeecCCC
Confidence 1122222211112211 11 244566666788888777 6666666555333
No 350
>PRK13616 lipoprotein LpqB; Provisional
Probab=98.54 E-value=4.5e-05 Score=70.60 Aligned_cols=188 Identities=15% Similarity=0.111 Sum_probs=111.9
Q ss_pred cceeEEEEecCCCeEEEEec------c-CCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCC--------
Q 014755 48 DKISYIEWALDSEYILCGLY------K-RLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQ-------- 112 (419)
Q Consensus 48 ~~v~~~~~s~~~~~l~~~~~------~-~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-------- 112 (419)
..+.+.++||||+.+++... + ...+.+++. .+.. ..+.... ......|+|+|+.+++.....
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~-gg~~-~~lt~g~-~~t~PsWspDG~~lw~v~dg~~~~~v~~~ 426 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPL-GGVA-VQVLEGH-SLTRPSWSLDADAVWVVVDGNTVVRVIRD 426 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeC-CCcc-eeeecCC-CCCCceECCCCCceEEEecCcceEEEecc
Confidence 46789999999999987762 2 124555554 2222 4443333 378899999999888775331
Q ss_pred ---CeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEE---EeccCCeE-E---EEEecc-cccee
Q 014755 113 ---LRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINL---LSCHTWEI-M---GVFAVD-TLDLA 181 (419)
Q Consensus 113 ---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i---~d~~~~~~-~---~~~~~~-~~~v~ 181 (419)
+.+.+.++..++... ..+..+..+.|||||..++.... +.|++ -....|+. + ..+... ...+.
T Consensus 427 ~~~gql~~~~vd~ge~~~--~~~g~Issl~wSpDG~RiA~i~~----g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~ 500 (591)
T PRK13616 427 PATGQLARTPVDASAVAS--RVPGPISELQLSRDGVRAAMIIG----GKVYLAVVEQTEDGQYALTNPREVGPGLGDTAV 500 (591)
T ss_pred CCCceEEEEeccCchhhh--ccCCCcCeEEECCCCCEEEEEEC----CEEEEEEEEeCCCCceeecccEEeecccCCccc
Confidence 133333444443332 33567999999999999988763 57777 44344541 1 112222 23368
Q ss_pred eeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEE
Q 014755 182 DIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLR 247 (419)
Q Consensus 182 ~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~ 247 (419)
.+.|.+++.+++.. ...+..++..+++|.....+........+..++-++. .++....++.+.
T Consensus 501 ~l~W~~~~~L~V~~-~~~~~~v~~v~vDG~~~~~~~~~n~~~~v~~vaa~~~--~iyv~~~~g~~~ 563 (591)
T PRK13616 501 SLDWRTGDSLVVGR-SDPEHPVWYVNLDGSNSDALPSRNLSAPVVAVAASPS--TVYVTDARAVLQ 563 (591)
T ss_pred cceEecCCEEEEEe-cCCCCceEEEecCCccccccCCCCccCceEEEecCCc--eEEEEcCCceEE
Confidence 89999999866443 3344556666777765444333222235777777663 344455555333
No 351
>KOG2066 consensus Vacuolar assembly/sorting protein VPS41 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.48 E-value=3.2e-05 Score=70.40 Aligned_cols=169 Identities=14% Similarity=0.159 Sum_probs=121.9
Q ss_pred CCEEEEEe-CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEE
Q 014755 19 ARYIAVAV-DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYAR 97 (419)
Q Consensus 19 ~~~la~~~-~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~ 97 (419)
++++|.|. +|.|++++....- ...+.|... ..+|.++++++.| |+|.|-.+-+.+...++ ....++.+++
T Consensus 49 ~~~~~~GtH~g~v~~~~~~~~~-~~~~~~s~~------~~~Gey~asCS~D-Gkv~I~sl~~~~~~~~~-df~rpiksia 119 (846)
T KOG2066|consen 49 DKFFALGTHRGAVYLTTCQGNP-KTNFDHSSS------ILEGEYVASCSDD-GKVVIGSLFTDDEITQY-DFKRPIKSIA 119 (846)
T ss_pred cceeeeccccceEEEEecCCcc-ccccccccc------ccCCceEEEecCC-CcEEEeeccCCccceeE-ecCCcceeEE
Confidence 67899998 7889999877554 445556554 6689999999966 99999999888876655 3456899999
Q ss_pred ECCC-----CCEEEEEecCCCeEEEEEcC---CCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeE
Q 014755 98 WSPD-----SRHILTTSDFQLRLTVWSLL---NTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEI 169 (419)
Q Consensus 98 ~~~~-----~~~l~~~~~~~~~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~ 169 (419)
++|+ .+.+++||..+ +.++.-+ ....+.+....++|.++.|. |+++|-+... -|++||..+++.
T Consensus 120 l~Pd~~~~~sk~fv~GG~ag--lvL~er~wlgnk~~v~l~~~eG~I~~i~W~--g~lIAWand~----Gv~vyd~~~~~~ 191 (846)
T KOG2066|consen 120 LHPDFSRQQSKQFVSGGMAG--LVLSERNWLGNKDSVVLSEGEGPIHSIKWR--GNLIAWANDD----GVKVYDTPTRQR 191 (846)
T ss_pred eccchhhhhhhheeecCcce--EEEehhhhhcCccceeeecCccceEEEEec--CcEEEEecCC----CcEEEeccccce
Confidence 9997 56677777654 6666533 22233356677888999996 6789988875 699999999888
Q ss_pred EEEEeccccc------eeeeeECCCCCeEEEEcCCCCceEEEEcC
Q 014755 170 MGVFAVDTLD------LADIEWSPDDSAIVIWDSPLEYKVLIYSP 208 (419)
Q Consensus 170 ~~~~~~~~~~------v~~~~~~~~~~~l~~~~~~~~~~i~~~d~ 208 (419)
+..++..... ...+.|.++.+.++-|. .+|++..+
T Consensus 192 l~~i~~p~~~~R~e~fpphl~W~~~~~LVIGW~----d~v~i~~I 232 (846)
T KOG2066|consen 192 LTNIPPPSQSVRPELFPPHLHWQDEDRLVIGWG----DSVKICSI 232 (846)
T ss_pred eeccCCCCCCCCcccCCCceEecCCCeEEEecC----CeEEEEEE
Confidence 7776554322 34678887777666553 25666555
No 352
>PRK10115 protease 2; Provisional
Probab=98.46 E-value=0.00068 Score=64.68 Aligned_cols=235 Identities=10% Similarity=-0.019 Sum_probs=123.8
Q ss_pred eEEcCCCCEEEEEeC--C----eEEEEecCCCcEEE-EeecCcceeEEEEecCCCeEEEEeccC-----CeEEEEEccCC
Q 014755 13 SCFSPNARYIAVAVD--Y----RLVVRDAHSFKVVQ-LFSCLDKISYIEWALDSEYILCGLYKR-----LMIQAWSLTQP 80 (419)
Q Consensus 13 ~~~s~d~~~la~~~~--~----~i~i~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~~~-----g~i~iw~~~~~ 80 (419)
+.+||||++||.+.| | .|++.|+.+++.+. .+.... ..++|++|++.|+....++ ..|+.+++.++
T Consensus 132 ~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~lgt~ 209 (686)
T PRK10115 132 MAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE--PSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIGTP 209 (686)
T ss_pred EEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc--eEEEEeeCCCEEEEEEecCCCCCCCEEEEEECCCC
Confidence 689999999999852 2 38899999887432 222222 5699999999888776542 26788888877
Q ss_pred --cceeeeecCCccEe-EEEECCCCCEEEEEec--CCCeEEEEEcC--CCeEEEeccCCCCe-eeEEEccCCCEEEEEee
Q 014755 81 --EWTCKIDEGLAGIA-YARWSPDSRHILTTSD--FQLRLTVWSLL--NTACVHVQSPKHAS-KGVAFTQDGKFAAICTR 152 (419)
Q Consensus 81 --~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~--~~~~i~iwd~~--~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~ 152 (419)
+....+........ ....+.++++++..+. ..+.+.+++.. .++...+......+ ..+. +. +..+...+.
T Consensus 210 ~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~ly~~tn 287 (686)
T PRK10115 210 ASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKDHEYSLD-HY-QHRFYLRSN 287 (686)
T ss_pred hhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECCCCCEEEEE-eC-CCEEEEEEc
Confidence 33323333233233 3344558887765542 22378888843 34433322222222 2222 22 334444333
Q ss_pred -cCCCCeEEEEeccC-CeEEEEEecc-c-cceeeeeECCCCCeEEE-EcCCCCceEEEEcCCCceEEEEeecCCCCceeE
Q 014755 153 -RDCKDYINLLSCHT-WEIMGVFAVD-T-LDLADIEWSPDDSAIVI-WDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKS 227 (419)
Q Consensus 153 -~~~~g~v~i~d~~~-~~~~~~~~~~-~-~~v~~~~~~~~~~~l~~-~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~ 227 (419)
+.....|...++.. ++. ..+..+ . ..+..+.+. ++.+++ ........+++++..+..+..+... ....+..
T Consensus 288 ~~~~~~~l~~~~~~~~~~~-~~l~~~~~~~~i~~~~~~--~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~-~~~~~~~ 363 (686)
T PRK10115 288 RHGKNFGLYRTRVRDEQQW-EELIPPRENIMLEGFTLF--TDWLVVEERQRGLTSLRQINRKTREVIGIAFD-DPAYVTW 363 (686)
T ss_pred CCCCCceEEEecCCCcccC-eEEECCCCCCEEEEEEEE--CCEEEEEEEeCCEEEEEEEcCCCCceEEecCC-CCceEee
Confidence 22223455555542 222 223333 2 357777776 334443 2222234567777654444444311 1112333
Q ss_pred EEEc--cCCC-eEEEEEe---cCcEEEEEcCCce
Q 014755 228 ISWS--PCGQ-FLAVGSY---DQTLRVLNHLTWK 255 (419)
Q Consensus 228 ~~~s--~~~~-~l~~~~~---d~~i~v~d~~~~~ 255 (419)
+.++ +++. ++++.+. -+.+..+|..+++
T Consensus 364 ~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~~ 397 (686)
T PRK10115 364 IAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGE 397 (686)
T ss_pred ecccCCCCCceEEEEEecCCCCCEEEEEECCCCc
Confidence 4444 4443 4433332 3578888887754
No 353
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=98.46 E-value=0.0012 Score=60.82 Aligned_cols=188 Identities=11% Similarity=0.018 Sum_probs=107.9
Q ss_pred CEEEEE-eCCeEEEEecCCCcEEEEeecCc--ceeE----------EEEecCCCeEEEEeccCCeEEEEEccCCcceeee
Q 014755 20 RYIAVA-VDYRLVVRDAHSFKVVQLFSCLD--KISY----------IEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKI 86 (419)
Q Consensus 20 ~~la~~-~~~~i~i~~~~~~~~~~~~~~~~--~v~~----------~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~ 86 (419)
..|.++ .++.|.-+|..+|+.+-.+.... .+.. +++. +..+++++.+ +.+.-+|.++|+.+...
T Consensus 70 g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~--~~~v~v~t~d-g~l~ALDa~TGk~~W~~ 146 (527)
T TIGR03075 70 GVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALY--DGKVFFGTLD-ARLVALDAKTGKVVWSK 146 (527)
T ss_pred CEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceEE--CCEEEEEcCC-CEEEEEECCCCCEEeec
Confidence 344444 47788889999999877654321 1111 1222 3456666656 79999999999877654
Q ss_pred ecCCcc-EeEEEECC---CCCEEEEEec-----CCCeEEEEEcCCCeEEE-eccC-C-----------------------
Q 014755 87 DEGLAG-IAYARWSP---DSRHILTTSD-----FQLRLTVWSLLNTACVH-VQSP-K----------------------- 132 (419)
Q Consensus 87 ~~~~~~-v~~~~~~~---~~~~l~~~~~-----~~~~i~iwd~~~~~~~~-~~~~-~----------------------- 132 (419)
...... -..+.-+| ++ .++++.. ..+.|..+|.++|+.+- .... .
T Consensus 147 ~~~~~~~~~~~tssP~v~~g-~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~ 225 (527)
T TIGR03075 147 KNGDYKAGYTITAAPLVVKG-KVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWPG 225 (527)
T ss_pred ccccccccccccCCcEEECC-EEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCCCC
Confidence 321100 00111122 34 4444432 12489999999988765 1111 0
Q ss_pred -------CCe-eeEEEccCCCEEEEEeec-----C----C----CCeEEEEeccCCeEEEEEeccccce---------ee
Q 014755 133 -------HAS-KGVAFTQDGKFAAICTRR-----D----C----KDYINLLSCHTWEIMGVFAVDTLDL---------AD 182 (419)
Q Consensus 133 -------~~~-~~~~~~~~~~~l~~~~~~-----~----~----~g~v~i~d~~~~~~~~~~~~~~~~v---------~~ 182 (419)
..+ ..+++.|...+++.+..+ . + ...|.-.|+++|+..-.++.....+ .-
T Consensus 226 ~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~l 305 (527)
T TIGR03075 226 DAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWDYDGVNEMIL 305 (527)
T ss_pred CccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCccccCCCCcEE
Confidence 011 245677777777766532 1 0 1267778999999877666532222 22
Q ss_pred eeECCCCC---eEEEEcCCCCceEEEEcC-CCceE
Q 014755 183 IEWSPDDS---AIVIWDSPLEYKVLIYSP-DGRCL 213 (419)
Q Consensus 183 ~~~~~~~~---~l~~~~~~~~~~i~~~d~-~~~~~ 213 (419)
+....+|+ .++. ...+|.++++|. +|+.+
T Consensus 306 ~d~~~~G~~~~~v~~--~~K~G~~~vlDr~tG~~i 338 (527)
T TIGR03075 306 FDLKKDGKPRKLLAH--ADRNGFFYVLDRTNGKLL 338 (527)
T ss_pred EEeccCCcEEEEEEE--eCCCceEEEEECCCCcee
Confidence 22334665 3334 677899999999 88875
No 354
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=98.45 E-value=0.00049 Score=56.06 Aligned_cols=196 Identities=15% Similarity=0.156 Sum_probs=112.7
Q ss_pred CcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecC-CccEeEEEECCCCCEEEEEecCCCeEEEEEcCCC--
Q 014755 47 LDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEG-LAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNT-- 123 (419)
Q Consensus 47 ~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~-- 123 (419)
...+..++|.|+.+.|++.....+.|..++. +|+.++++.-. .+..-.+++..++.++++.-.++ .+.++++...
T Consensus 21 ~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~-~L~~~~~~~~~~ 98 (248)
T PF06977_consen 21 LDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQ-RLYIFTIDDDTT 98 (248)
T ss_dssp -S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTT-EEEEEEE----T
T ss_pred cCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCC-cEEEEEEecccc
Confidence 4469999999998877777766688888886 46777776433 35678899988776666544454 8999988431
Q ss_pred -----eEEE----ec-cCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC---CeEEEEEe--------ccccceee
Q 014755 124 -----ACVH----VQ-SPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT---WEIMGVFA--------VDTLDLAD 182 (419)
Q Consensus 124 -----~~~~----~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~---~~~~~~~~--------~~~~~v~~ 182 (419)
.... +. ........++|+|.++.|+++-.. ....+|.++. ...+.... .....+.+
T Consensus 99 ~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~---~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~ 175 (248)
T PF06977_consen 99 SLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKER---KPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSG 175 (248)
T ss_dssp T--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEES---SSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---E
T ss_pred ccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCC---CChhhEEEccccCccceeeccccccccccceeccccc
Confidence 1111 11 233456899999998888877654 3455555543 11111111 12245788
Q ss_pred eeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCC-------CCceeEEEEccCCCeEEEEEecCcEEEE
Q 014755 183 IEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYES-------GLGVKSISWSPCGQFLAVGSYDQTLRVL 249 (419)
Q Consensus 183 ~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-------~~~v~~~~~s~~~~~l~~~~~d~~i~v~ 249 (419)
++++|....+++.+ .....|..+|.+|+.+..+..... -.....|+|.++|++.++ ++-+..++|
T Consensus 176 l~~~p~t~~lliLS-~es~~l~~~d~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIv-sEpNlfy~f 247 (248)
T PF06977_consen 176 LSYDPRTGHLLILS-DESRLLLELDRQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIV-SEPNLFYRF 247 (248)
T ss_dssp EEEETTTTEEEEEE-TTTTEEEEE-TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEE-ETTTEEEEE
T ss_pred eEEcCCCCeEEEEE-CCCCeEEEECCCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEE-cCCceEEEe
Confidence 99999876666543 557889999999998877765431 125789999999965544 455555544
No 355
>KOG2066 consensus Vacuolar assembly/sorting protein VPS41 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.42 E-value=1.2e-05 Score=73.18 Aligned_cols=137 Identities=14% Similarity=0.168 Sum_probs=102.4
Q ss_pred CCCEEEEEe-CCeEEEEecCCCcEEEEeecCcceeEEEEecC-----CCeEEEEeccCCeEEEEEcc--CCcceeeeecC
Q 014755 18 NARYIAVAV-DYRLVVRDAHSFKVVQLFSCLDKISYIEWALD-----SEYILCGLYKRLMIQAWSLT--QPEWTCKIDEG 89 (419)
Q Consensus 18 d~~~la~~~-~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~-----~~~l~~~~~~~g~i~iw~~~--~~~~~~~~~~~ 89 (419)
+|.++|+++ ||+|.|-.+.+.+....+....++.+++++|+ .+.+++|+.. | +.++.-. ..+....+...
T Consensus 82 ~Gey~asCS~DGkv~I~sl~~~~~~~~~df~rpiksial~Pd~~~~~sk~fv~GG~a-g-lvL~er~wlgnk~~v~l~~~ 159 (846)
T KOG2066|consen 82 EGEYVASCSDDGKVVIGSLFTDDEITQYDFKRPIKSIALHPDFSRQQSKQFVSGGMA-G-LVLSERNWLGNKDSVVLSEG 159 (846)
T ss_pred CCceEEEecCCCcEEEeeccCCccceeEecCCcceeEEeccchhhhhhhheeecCcc-e-EEEehhhhhcCccceeeecC
Confidence 699999999 78899999998888888888889999999998 5678888754 6 7776532 11222245667
Q ss_pred CccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCe------eeEEEccCCCEEEEEeecCCCCeEEEE
Q 014755 90 LAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHAS------KGVAFTQDGKFAAICTRRDCKDYINLL 162 (419)
Q Consensus 90 ~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~g~v~i~ 162 (419)
.++|.++.|. |.++|-+++.| |++||+..++.+. +......+ ..+.|.++. .|+.|=.+ +|++.
T Consensus 160 eG~I~~i~W~--g~lIAWand~G--v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~-~LVIGW~d----~v~i~ 230 (846)
T KOG2066|consen 160 EGPIHSIKWR--GNLIAWANDDG--VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDED-RLVIGWGD----SVKIC 230 (846)
T ss_pred ccceEEEEec--CcEEEEecCCC--cEEEeccccceeeccCCCCCCCCcccCCCceEecCCC-eEEEecCC----eEEEE
Confidence 7899999994 77888888776 9999999988776 43333333 567787665 45555543 78888
Q ss_pred ecc
Q 014755 163 SCH 165 (419)
Q Consensus 163 d~~ 165 (419)
.++
T Consensus 231 ~I~ 233 (846)
T KOG2066|consen 231 SIK 233 (846)
T ss_pred EEe
Confidence 877
No 356
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=98.42 E-value=0.0006 Score=55.55 Aligned_cols=206 Identities=12% Similarity=0.146 Sum_probs=114.6
Q ss_pred eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccc-cceeeeeECCCCCeEEEEcCCCCceEEEE
Q 014755 128 VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDT-LDLADIEWSPDDSAIVIWDSPLEYKVLIY 206 (419)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~~~~~i~~~ 206 (419)
+.+....+..++|+|+.+.|++.... .+.|..++.+ |+.++.+.... ...-.+++..++.+++. ...++.+.++
T Consensus 17 l~g~~~e~SGLTy~pd~~tLfaV~d~--~~~i~els~~-G~vlr~i~l~g~~D~EgI~y~g~~~~vl~--~Er~~~L~~~ 91 (248)
T PF06977_consen 17 LPGILDELSGLTYNPDTGTLFAVQDE--PGEIYELSLD-GKVLRRIPLDGFGDYEGITYLGNGRYVLS--EERDQRLYIF 91 (248)
T ss_dssp -TT--S-EEEEEEETTTTEEEEEETT--TTEEEEEETT---EEEEEE-SS-SSEEEEEE-STTEEEEE--ETTTTEEEEE
T ss_pred CCCccCCccccEEcCCCCeEEEEECC--CCEEEEEcCC-CCEEEEEeCCCCCCceeEEEECCCEEEEE--EcCCCcEEEE
Confidence 45556678999999998777776654 4788888874 78888776543 56788899888876665 3457888888
Q ss_pred cC--CCce-----EEEEe--ec-CCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCc---eeeeeecccccccCCCccc
Q 014755 207 SP--DGRC-----LLKYQ--AY-ESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTW---KTFAEFMHLSTVRGPCFPA 273 (419)
Q Consensus 207 d~--~~~~-----~~~~~--~~-~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~---~~~~~~~~~~~~~~~~~~~ 273 (419)
++ .++. ...+. .. .+...+..++|+|.++.|+.+-...-.++|.+... ..+...... ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~-~~------- 163 (248)
T PF06977_consen 92 TIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQ-DL------- 163 (248)
T ss_dssp EE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-H-HH-------
T ss_pred EEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeecccc-cc-------
Confidence 87 2221 12222 11 23346899999999888877777766777776531 111110000 00
Q ss_pred eeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccC-CeEEEEec
Q 014755 274 VFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSD-SQYICTRN 352 (419)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~~~~ 352 (419)
.. .......+..++++|. |.+++...
T Consensus 164 --~~---------------------------------------------------~~~~~~d~S~l~~~p~t~~lliLS~ 190 (248)
T PF06977_consen 164 --DD---------------------------------------------------DKLFVRDLSGLSYDPRTGHLLILSD 190 (248)
T ss_dssp --H----------------------------------------------------HT--SS---EEEEETTTTEEEEEET
T ss_pred --cc---------------------------------------------------ccceeccccceEEcCCCCeEEEEEC
Confidence 00 0001223678899886 56666666
Q ss_pred CCCCceEEEeeccCCCceeecc-----cC-----CCeeEEEeCCCCCeEEEEeCCCcEEEe
Q 014755 353 DSMPTTLWIWDICRQEPAAILV-----QK-----DPIRAATWDPTCTRLVLCTGSSHLYMW 403 (419)
Q Consensus 353 ~d~~~~i~iwd~~~~~~~~~~~-----~~-----~~v~~~~~s~~~~~l~s~~~dg~i~vw 403 (419)
.. ..|..+| .+|+++..+. |. ...-.|+|.++|++.+ .++-+..+++
T Consensus 191 es--~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYI-vsEpNlfy~f 247 (248)
T PF06977_consen 191 ES--RLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYI-VSEPNLFYRF 247 (248)
T ss_dssp TT--TEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEE-EETTTEEEEE
T ss_pred CC--CeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEE-EcCCceEEEe
Confidence 66 8999999 6677665542 21 2567899999997444 5566655554
No 357
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.39 E-value=0.00046 Score=55.51 Aligned_cols=225 Identities=12% Similarity=0.031 Sum_probs=138.1
Q ss_pred CCCcEEEEeecCcceeEEEEecCCC-eEEEEeccCCeEEEEEccCCcceeeeecCCcc--EeEEEECCCCCEEEEEecC-
Q 014755 36 HSFKVVQLFSCLDKISYIEWALDSE-YILCGLYKRLMIQAWSLTQPEWTCKIDEGLAG--IAYARWSPDSRHILTTSDF- 111 (419)
Q Consensus 36 ~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~~- 111 (419)
+.|+++....-......|+|+|... -++.+-.-.-...++|..+.+.+..+...++. .-.=.|||||.+|+..-+|
T Consensus 56 eaGk~v~~~~lpaR~Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndf 135 (366)
T COG3490 56 EAGKIVFATALPARGHGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDF 135 (366)
T ss_pred cCCceeeeeecccccCCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCC
Confidence 3466666555666778899999654 45566544224678999988877776544433 2234699999999887432
Q ss_pred ---CCeEEEEEcCCCeEEE--eccCCCCeeeEEEccCCCEEEEEeec---------------CCCCeEEEEeccCCeEEE
Q 014755 112 ---QLRLTVWSLLNTACVH--VQSPKHASKGVAFTQDGKFAAICTRR---------------DCKDYINLLSCHTWEIMG 171 (419)
Q Consensus 112 ---~~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~---------------~~~g~v~i~d~~~~~~~~ 171 (419)
.|.|-+||.+.+-... +..+.-....+.+.+||+.++.+... ..+-.+.+.|..+++++.
T Consensus 136 d~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~lie 215 (366)
T COG3490 136 DPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIE 215 (366)
T ss_pred CCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhh
Confidence 3589999998644333 56666667899999999999987641 111244556656666554
Q ss_pred EEe----ccccceeeeeECCCCCeEEEEcCCCCc---e-EEEEcCCCceEEEEeecCC-----CCceeEEEEccCCCeEE
Q 014755 172 VFA----VDTLDLADIEWSPDDSAIVIWDSPLEY---K-VLIYSPDGRCLLKYQAYES-----GLGVKSISWSPCGQFLA 238 (419)
Q Consensus 172 ~~~----~~~~~v~~~~~~~~~~~l~~~~~~~~~---~-i~~~d~~~~~~~~~~~~~~-----~~~v~~~~~s~~~~~l~ 238 (419)
+.. .+...+..++..+||..++-..-..+. - +.-.-..|+.+..+...+. ...|-+++.+.+..+++
T Consensus 216 kh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~ 295 (366)
T COG3490 216 KHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVA 295 (366)
T ss_pred hccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHHhhhhheeecccCCeEE
Confidence 432 234568888888888766541111110 0 0000113333333322211 12677888887666666
Q ss_pred EEEec-CcEEEEEcCCceeeeee
Q 014755 239 VGSYD-QTLRVLNHLTWKTFAEF 260 (419)
Q Consensus 239 ~~~~d-~~i~v~d~~~~~~~~~~ 260 (419)
..+-. +...+||..+|..+..-
T Consensus 296 lTSP~GN~~vi~da~tG~vv~~a 318 (366)
T COG3490 296 LTSPRGNRAVIWDAATGAVVSEA 318 (366)
T ss_pred EecCCCCeEEEEEcCCCcEEecc
Confidence 55544 46788999999876653
No 358
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.37 E-value=1e-05 Score=71.25 Aligned_cols=92 Identities=10% Similarity=0.103 Sum_probs=72.2
Q ss_pred EEEEecCCCcEEE----EeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEE
Q 014755 30 LVVRDAHSFKVVQ----LFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHI 105 (419)
Q Consensus 30 i~i~~~~~~~~~~----~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 105 (419)
-.+|+....++.+ .+.....|.+.+++|+.+.|+.|+.| |+|.+||...+. .......-.++.++|+|+|..+
T Consensus 238 ~ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~kLvlGC~D-gSiiLyD~~~~~--t~~~ka~~~P~~iaWHp~gai~ 314 (545)
T PF11768_consen 238 SCIYECSRNKLQRVSVTSIPLPSQVICCARSPSEDKLVLGCED-GSIILYDTTRGV--TLLAKAEFIPTLIAWHPDGAIF 314 (545)
T ss_pred EEEEEeecCceeEEEEEEEecCCcceEEecCcccceEEEEecC-CeEEEEEcCCCe--eeeeeecccceEEEEcCCCcEE
Confidence 3467776665433 34578899999999999999999987 899999987663 2333445567899999999999
Q ss_pred EEEecCCCeEEEEEcCCCeE
Q 014755 106 LTTSDFQLRLTVWSLLNTAC 125 (419)
Q Consensus 106 ~~~~~~~~~i~iwd~~~~~~ 125 (419)
++++..| .+.+||+.-...
T Consensus 315 ~V~s~qG-elQ~FD~ALspi 333 (545)
T PF11768_consen 315 VVGSEQG-ELQCFDMALSPI 333 (545)
T ss_pred EEEcCCc-eEEEEEeecCcc
Confidence 9998877 999999875443
No 359
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=98.36 E-value=0.0017 Score=57.94 Aligned_cols=174 Identities=15% Similarity=0.137 Sum_probs=86.7
Q ss_pred eEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-e--ccCCCCe-----eeEEEcc
Q 014755 71 MIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-V--QSPKHAS-----KGVAFTQ 142 (419)
Q Consensus 71 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~--~~~~~~~-----~~~~~~~ 142 (419)
.|+||+.. |+.+..+.-..+.+.++.|+.+.+ |+....++ .++++|+.... .. + ......+ ....+..
T Consensus 62 ~I~iys~s-G~ll~~i~w~~~~iv~~~wt~~e~-LvvV~~dG-~v~vy~~~G~~-~fsl~~~i~~~~v~e~~i~~~~~~~ 137 (410)
T PF04841_consen 62 SIQIYSSS-GKLLSSIPWDSGRIVGMGWTDDEE-LVVVQSDG-TVRVYDLFGEF-QFSLGEEIEEEKVLECRIFAIWFYK 137 (410)
T ss_pred EEEEECCC-CCEeEEEEECCCCEEEEEECCCCe-EEEEEcCC-EEEEEeCCCce-eechhhhccccCcccccccccccCC
Confidence 48999864 555666554448899999998655 55555666 99999997544 11 1 1111122 1222333
Q ss_pred CCCEEEEEeecCCCCeEEEEeccCCe-EEEEEeccccceee----------eeECCCCCeEEEEcCCCCceEEEEcCCCc
Q 014755 143 DGKFAAICTRRDCKDYINLLSCHTWE-IMGVFAVDTLDLAD----------IEWSPDDSAIVIWDSPLEYKVLIYSPDGR 211 (419)
Q Consensus 143 ~~~~l~~~~~~~~~g~v~i~d~~~~~-~~~~~~~~~~~v~~----------~~~~~~~~~l~~~~~~~~~~i~~~d~~~~ 211 (419)
+| +++...+ +.+++.+--... ..+.+......... ..++.+....+. ...++.+.+.+...-
T Consensus 138 ~G--ivvLt~~---~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~--~~~g~~i~~i~~~~~ 210 (410)
T PF04841_consen 138 NG--IVVLTGN---NRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEIL--LANGETIYIIDENSF 210 (410)
T ss_pred CC--EEEECCC---CeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEE--EecCCEEEEEEcccc
Confidence 44 3322222 344443222111 11111110000010 112222222222 112233332222110
Q ss_pred eEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeee
Q 014755 212 CLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEF 260 (419)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 260 (419)
..+. ..+++..|++||+|+++|.-..+|.+.+....-.+.+.++
T Consensus 211 --~~i~---~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~ 254 (410)
T PF04841_consen 211 --KQID---SDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEF 254 (410)
T ss_pred --cccc---CCCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEe
Confidence 0111 1237999999999999999999999998876544444444
No 360
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only]
Probab=98.35 E-value=2.8e-05 Score=71.33 Aligned_cols=110 Identities=10% Similarity=0.131 Sum_probs=83.6
Q ss_pred eEEEEecCCCeEEEEecc---CCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE
Q 014755 51 SYIEWALDSEYILCGLYK---RLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH 127 (419)
Q Consensus 51 ~~~~~s~~~~~l~~~~~~---~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~ 127 (419)
+-.+|+|...++++++.. .|.|.||- ++|++.+.. ..+-.+++++|+|..-.|+.+-..+ .+.+|...+.+...
T Consensus 19 ti~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~V-t~P~hatSLCWHpe~~vLa~gwe~g-~~~v~~~~~~e~ht 95 (1416)
T KOG3617|consen 19 TISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDV-TYPVHATSLCWHPEEFVLAQGWEMG-VSDVQKTNTTETHT 95 (1416)
T ss_pred cccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCccc-ccceehhhhccChHHHHHhhccccc-eeEEEecCCceeee
Confidence 445799999999887632 47888884 677654333 2333467899999876666665555 89999988876655
Q ss_pred -eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC
Q 014755 128 -VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT 166 (419)
Q Consensus 128 -~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~ 166 (419)
...|+.++..+.||++|..++++..- |.|.+|....
T Consensus 96 v~~th~a~i~~l~wS~~G~~l~t~d~~---g~v~lwr~d~ 132 (1416)
T KOG3617|consen 96 VVETHPAPIQGLDWSHDGTVLMTLDNP---GSVHLWRYDV 132 (1416)
T ss_pred eccCCCCCceeEEecCCCCeEEEcCCC---ceeEEEEeee
Confidence 67788999999999999999998764 8999998764
No 361
>PRK10115 protease 2; Provisional
Probab=98.28 E-value=0.0044 Score=59.27 Aligned_cols=197 Identities=6% Similarity=-0.017 Sum_probs=107.9
Q ss_pred ceeEEEEecCCCeEEEEeccCC----eEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCC-----CeEEEEE
Q 014755 49 KISYIEWALDSEYILCGLYKRL----MIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQ-----LRLTVWS 119 (419)
Q Consensus 49 ~v~~~~~s~~~~~l~~~~~~~g----~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-----~~i~iwd 119 (419)
.+..+.+||||++|+.+...+| .+++.|+.+++.+........ ..++|++|++.|+....+. ..|+.++
T Consensus 128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~ 205 (686)
T PRK10115 128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNVE--PSFVWANDSWTFYYVRKHPVTLLPYQVWRHT 205 (686)
T ss_pred EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCcc--eEEEEeeCCCEEEEEEecCCCCCCCEEEEEE
Confidence 4677899999999998754333 688999988864322222222 4599999999888775432 2688888
Q ss_pred cCCC--eEEE-eccCCCCee-eEEEccCCCEEEEEeecCCCCeEEEEecc--CCeEEEEEeccccceeeeeECCCCCeEE
Q 014755 120 LLNT--ACVH-VQSPKHASK-GVAFTQDGKFAAICTRRDCKDYINLLSCH--TWEIMGVFAVDTLDLADIEWSPDDSAIV 193 (419)
Q Consensus 120 ~~~~--~~~~-~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~g~v~i~d~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 193 (419)
+.++ +... +........ ....+.++++++..+.....+.+.+++.. .++....+.........+. +..+.+++
T Consensus 206 lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ly~ 284 (686)
T PRK10115 206 IGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKDHEYSLD-HYQHRFYL 284 (686)
T ss_pred CCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECCCCCEEEEE-eCCCEEEE
Confidence 8887 3333 332222232 33445588887777666555688998853 3332222222222222332 22333333
Q ss_pred EEcC-CCCceEEEEcCC-CceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEE
Q 014755 194 IWDS-PLEYKVLIYSPD-GRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVL 249 (419)
Q Consensus 194 ~~~~-~~~~~i~~~d~~-~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~ 249 (419)
..+. .....|...++. ......+..+.....+..+.+.. +.++++...++.-+++
T Consensus 285 ~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~-~~l~~~~~~~g~~~l~ 341 (686)
T PRK10115 285 RSNRHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLFT-DWLVVEERQRGLTSLR 341 (686)
T ss_pred EEcCCCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEEC-CEEEEEEEeCCEEEEE
Confidence 3322 223445555553 22223333332223677787773 3344555556654444
No 362
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=98.26 E-value=0.0011 Score=58.41 Aligned_cols=202 Identities=13% Similarity=0.122 Sum_probs=109.0
Q ss_pred ceeEEEEecCCCeEEEEeccCCeEEEEEccCCcc-------------------------------------------eee
Q 014755 49 KISYIEWALDSEYILCGLYKRLMIQAWSLTQPEW-------------------------------------------TCK 85 (419)
Q Consensus 49 ~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~-------------------------------------------~~~ 85 (419)
.|+.++|+++..-|+++... |.|-||.....+. ...
T Consensus 3 ~v~~vs~a~~t~Elav~~~~-GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l 81 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLES-GEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTL 81 (395)
T ss_dssp -EEEEEEETTTTEEEEEETT-S-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccC-CcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhh
Confidence 47788888887778887765 7887776642211 011
Q ss_pred eecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE---ecc------CCCCeeeEEEc-----cCC---CEEE
Q 014755 86 IDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH---VQS------PKHASKGVAFT-----QDG---KFAA 148 (419)
Q Consensus 86 ~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~---~~~------~~~~~~~~~~~-----~~~---~~l~ 148 (419)
+....++|++++.|.- -+++.+..++ .+.|.|++....+. +.. ....++++.|+ .|+ -.++
T Consensus 82 ~~~~~g~vtal~~S~i-GFvaigy~~G-~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~ 159 (395)
T PF08596_consen 82 LDAKQGPVTALKNSDI-GFVAIGYESG-SLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLL 159 (395)
T ss_dssp E---S-SEEEEEE-BT-SEEEEEETTS-EEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEE
T ss_pred eeccCCcEeEEecCCC-cEEEEEecCC-cEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEE
Confidence 1223567889998744 4777777766 99999999888776 222 12245667775 233 3455
Q ss_pred EEeecCCCCeEEEEeccC---CeEE----EEEeccccceeeee-ECCC-C--------------------CeEEEEcCCC
Q 014755 149 ICTRRDCKDYINLLSCHT---WEIM----GVFAVDTLDLADIE-WSPD-D--------------------SAIVIWDSPL 199 (419)
Q Consensus 149 ~~~~~~~~g~v~i~d~~~---~~~~----~~~~~~~~~v~~~~-~~~~-~--------------------~~l~~~~~~~ 199 (419)
+|... |.+.+|.+.- +... .....+...+..+. ++.+ | .++++ .+
T Consensus 160 vGTn~---G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVv---vS 233 (395)
T PF08596_consen 160 VGTNS---GNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVV---VS 233 (395)
T ss_dssp EEETT---SEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEE---E-
T ss_pred EEeCC---CCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEE---Ec
Confidence 56554 8999887741 2111 11113334444443 2221 1 12333 33
Q ss_pred CceEEEEcC-CCceEEEEeecCCCCceeEEEEc-----cCCCeEEEEEecCcEEEEEcCCceeeeeec
Q 014755 200 EYKVLIYSP-DGRCLLKYQAYESGLGVKSISWS-----PCGQFLAVGSYDQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 200 ~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s-----~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 261 (419)
+..++++.+ +.+..++.. .....+..+.+- ..+..|++-..+|.|++|.+..-+.+..+.
T Consensus 234 e~~irv~~~~~~k~~~K~~--~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~ 299 (395)
T PF08596_consen 234 ESDIRVFKPPKSKGAHKSF--DDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVS 299 (395)
T ss_dssp SSEEEEE-TT---EEEEE---SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE
T ss_pred ccceEEEeCCCCcccceee--ccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhccc
Confidence 678999998 666555444 221133444452 356678888899999999999988877765
No 363
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=98.25 E-value=0.0023 Score=55.42 Aligned_cols=175 Identities=11% Similarity=0.035 Sum_probs=107.0
Q ss_pred CeEEEEEccCCcceeeeecCC-ccEeE---EEECCC----CCEEEEEec-----C---C-CeEEEEEcCCC-----eEEE
Q 014755 70 LMIQAWSLTQPEWTCKIDEGL-AGIAY---ARWSPD----SRHILTTSD-----F---Q-LRLTVWSLLNT-----ACVH 127 (419)
Q Consensus 70 g~i~iw~~~~~~~~~~~~~~~-~~v~~---~~~~~~----~~~l~~~~~-----~---~-~~i~iwd~~~~-----~~~~ 127 (419)
+.|++.|..+.+.+..+.-.. ..+.+ +.+..+ .+++++|.. + . |.|.++++... +...
T Consensus 2 s~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~ 81 (321)
T PF03178_consen 2 SSIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKL 81 (321)
T ss_dssp -EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEE
T ss_pred cEEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEE
Confidence 468888888777665543322 22443 444433 466776642 1 1 68999999984 3322
Q ss_pred --eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCe-EEEEEec-cccceeeeeECCCCCeEEEEcCCCCceE
Q 014755 128 --VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWE-IMGVFAV-DTLDLADIEWSPDDSAIVIWDSPLEYKV 203 (419)
Q Consensus 128 --~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~-~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~i 203 (419)
....+++|.+++-- +.+++++.. +.|.+|++...+ ....-.. ....+.++.. .+.++++.|....-.+
T Consensus 82 i~~~~~~g~V~ai~~~--~~~lv~~~g----~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~--~~~~I~vgD~~~sv~~ 153 (321)
T PF03178_consen 82 IHSTEVKGPVTAICSF--NGRLVVAVG----NKLYVYDLDNSKTLLKKAFYDSPFYITSLSV--FKNYILVGDAMKSVSL 153 (321)
T ss_dssp EEEEEESS-EEEEEEE--TTEEEEEET----TEEEEEEEETTSSEEEEEEE-BSSSEEEEEE--ETTEEEEEESSSSEEE
T ss_pred EEEEeecCcceEhhhh--CCEEEEeec----CEEEEEEccCcccchhhheecceEEEEEEec--cccEEEEEEcccCEEE
Confidence 34456777777765 334655554 589999998877 4433222 2234555554 4668888766544445
Q ss_pred EEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcC
Q 014755 204 LIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHL 252 (419)
Q Consensus 204 ~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~ 252 (419)
.-|+..+..+..+........++++.+-++++.++.+..+|.+.++...
T Consensus 154 ~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~ 202 (321)
T PF03178_consen 154 LRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN 202 (321)
T ss_dssp EEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred EEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence 5566655555555554444578999998777789999999999998865
No 364
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=98.24 E-value=0.0041 Score=57.46 Aligned_cols=195 Identities=11% Similarity=0.051 Sum_probs=113.2
Q ss_pred CCeEEEEeccCCeEEEEEccCCcceeeeecCC-ccEeE----------EEECCCCCEEEEEecCCCeEEEEEcCCCeEEE
Q 014755 59 SEYILCGLYKRLMIQAWSLTQPEWTCKIDEGL-AGIAY----------ARWSPDSRHILTTSDFQLRLTVWSLLNTACVH 127 (419)
Q Consensus 59 ~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~-~~v~~----------~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~ 127 (419)
+..+++++.+ +.|.-+|..+|+.+-+..... ..+.. ++. .+..++.++.++ .+.-.|.++|+.+-
T Consensus 69 ~g~vyv~s~~-g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av--~~~~v~v~t~dg-~l~ALDa~TGk~~W 144 (527)
T TIGR03075 69 DGVMYVTTSY-SRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVAL--YDGKVFFGTLDA-RLVALDAKTGKVVW 144 (527)
T ss_pred CCEEEEECCC-CcEEEEECCCCceeeEecCCCCcccccccccccccccceE--ECCEEEEEcCCC-EEEEEECCCCCEEe
Confidence 4456666555 789999999998776654321 11111 112 234566666666 89999999998876
Q ss_pred eccCC-C----Cee-eEEEccCCCEEEEEeec---CCCCeEEEEeccCCeEEEEEecccc--------------------
Q 014755 128 VQSPK-H----ASK-GVAFTQDGKFAAICTRR---DCKDYINLLSCHTWEIMGVFAVDTL-------------------- 178 (419)
Q Consensus 128 ~~~~~-~----~~~-~~~~~~~~~~l~~~~~~---~~~g~v~i~d~~~~~~~~~~~~~~~-------------------- 178 (419)
..... . .+. ...+. ++ .++++... ...|.|.-+|.++|+.+-.+..-..
T Consensus 145 ~~~~~~~~~~~~~tssP~v~-~g-~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~t 222 (527)
T TIGR03075 145 SKKNGDYKAGYTITAAPLVV-KG-KVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKT 222 (527)
T ss_pred ecccccccccccccCCcEEE-CC-EEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCC
Confidence 22111 1 111 11111 33 44444321 1237899999999887655432111
Q ss_pred -----------ce-eeeeECCCCCeEEEEcCC----------CC----ceEEEEcC-CCceEEEEeecCCC-------Cc
Q 014755 179 -----------DL-ADIEWSPDDSAIVIWDSP----------LE----YKVLIYSP-DGRCLLKYQAYESG-------LG 224 (419)
Q Consensus 179 -----------~v-~~~~~~~~~~~l~~~~~~----------~~----~~i~~~d~-~~~~~~~~~~~~~~-------~~ 224 (419)
.+ ..+++.|...++++..+. .| ..|...|+ +|+..-.++...|. ..
T Consensus 223 w~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~ 302 (527)
T TIGR03075 223 WPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWDYDGVNE 302 (527)
T ss_pred CCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCccccCCCC
Confidence 01 123555555666653221 01 26778888 88888777765442 11
Q ss_pred eeEEEEccCCC---eEEEEEecCcEEEEEcCCceeeee
Q 014755 225 VKSISWSPCGQ---FLAVGSYDQTLRVLNHLTWKTFAE 259 (419)
Q Consensus 225 v~~~~~s~~~~---~l~~~~~d~~i~v~d~~~~~~~~~ 259 (419)
..-+.+..+|+ .++.+..+|.+++.|-.+|+++..
T Consensus 303 p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i~~ 340 (527)
T TIGR03075 303 MILFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLLSA 340 (527)
T ss_pred cEEEEeccCCcEEEEEEEeCCCceEEEEECCCCceecc
Confidence 12222334665 778899999999999999998743
No 365
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=98.16 E-value=0.0025 Score=55.20 Aligned_cols=212 Identities=16% Similarity=0.148 Sum_probs=120.6
Q ss_pred CeEEEEecCCCcEEEEee--cCcceeEEEEec---C----CCeEEEEecc--------C-CeEEEEEccCC----cceee
Q 014755 28 YRLVVRDAHSFKVVQLFS--CLDKISYIEWAL---D----SEYILCGLYK--------R-LMIQAWSLTQP----EWTCK 85 (419)
Q Consensus 28 ~~i~i~~~~~~~~~~~~~--~~~~v~~~~~s~---~----~~~l~~~~~~--------~-g~i~iw~~~~~----~~~~~ 85 (419)
..|++.|..+.+.+..+. ....+.+++... + ..++++|..- . |.|.++++... ..+..
T Consensus 2 s~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~ 81 (321)
T PF03178_consen 2 SSIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKL 81 (321)
T ss_dssp -EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEE
T ss_pred cEEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEE
Confidence 358899999888777554 444555554433 2 4677777641 2 88999999884 12222
Q ss_pred e--ecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCe-EEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEE
Q 014755 86 I--DEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTA-CVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLL 162 (419)
Q Consensus 86 ~--~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~ 162 (419)
+ ....++|++++-- ++. |+++.. + .|.+|++...+ ..............+....+++++++... ..+.++
T Consensus 82 i~~~~~~g~V~ai~~~-~~~-lv~~~g-~-~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~~~~I~vgD~~---~sv~~~ 154 (321)
T PF03178_consen 82 IHSTEVKGPVTAICSF-NGR-LVVAVG-N-KLYVYDLDNSKTLLKKAFYDSPFYITSLSVFKNYILVGDAM---KSVSLL 154 (321)
T ss_dssp EEEEEESS-EEEEEEE-TTE-EEEEET-T-EEEEEEEETTSSEEEEEEE-BSSSEEEEEEETTEEEEEESS---SSEEEE
T ss_pred EEEEeecCcceEhhhh-CCE-EEEeec-C-EEEEEEccCcccchhhheecceEEEEEEeccccEEEEEEcc---cCEEEE
Confidence 2 2346778888765 444 555544 3 89999999887 65533333333444444446688888754 566666
Q ss_pred eccC-CeEEEEEe--ccccceeeeeECCCCCeEEEEcCCCCceEEEEcCC--------Cc-eEEEE-eecCCCCceeEE-
Q 014755 163 SCHT-WEIMGVFA--VDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPD--------GR-CLLKY-QAYESGLGVKSI- 228 (419)
Q Consensus 163 d~~~-~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~--------~~-~~~~~-~~~~~~~~v~~~- 228 (419)
..+. ...+..+. .....+.++.+-++++.+++.| .+|.+.++... +. .+... ..+-+ ..|+++
T Consensus 155 ~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D--~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg-~~v~~~~ 231 (321)
T PF03178_consen 155 RYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGD--KDGNLFVLRYNPEIPNSRDGDPKLERISSFHLG-DIVNSFR 231 (321)
T ss_dssp EEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEE--TTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-S-S-EEEEE
T ss_pred EEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEc--CCCeEEEEEECCCCcccccccccceeEEEEECC-CccceEE
Confidence 4432 23222222 2345688888886767777744 47888877652 22 33322 22222 257777
Q ss_pred --EEccC--CC------eEEEEEecCcEEEE
Q 014755 229 --SWSPC--GQ------FLAVGSYDQTLRVL 249 (419)
Q Consensus 229 --~~s~~--~~------~l~~~~~d~~i~v~ 249 (419)
.+.|. +. .++.++.+|.|.+.
T Consensus 232 ~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l 262 (321)
T PF03178_consen 232 RGSLIPRSGSSESPNRPQILYGTVDGSIGVL 262 (321)
T ss_dssp E--SS--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred EEEeeecCCCCcccccceEEEEecCCEEEEE
Confidence 55552 22 48888889988843
No 366
>PRK13616 lipoprotein LpqB; Provisional
Probab=98.15 E-value=0.00055 Score=63.55 Aligned_cols=147 Identities=11% Similarity=0.066 Sum_probs=90.3
Q ss_pred cCeEEcCCCCEEEEEe-------CC--eEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEecc-----------CC
Q 014755 11 GPSCFSPNARYIAVAV-------DY--RLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYK-----------RL 70 (419)
Q Consensus 11 ~~~~~s~d~~~la~~~-------~~--~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~-----------~g 70 (419)
...++||||+.+|+.. +. .|++++.. +......... ......|+|||+.|++.... .+
T Consensus 353 sspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g-g~~~~lt~g~-~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~g 430 (591)
T PRK13616 353 TSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLG-GVAVQVLEGH-SLTRPSWSLDADAVWVVVDGNTVVRVIRDPATG 430 (591)
T ss_pred ccceECCCCCEEEEEEeecCCCCCcceEEEEEeCC-CcceeeecCC-CCCCceECCCCCceEEEecCcceEEEeccCCCc
Confidence 3478999999998875 22 36666653 3333333333 48899999999988877522 12
Q ss_pred eEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEE---EEcCCCeEEE-----ecc-CCCCeeeEEEc
Q 014755 71 MIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTV---WSLLNTACVH-----VQS-PKHASKGVAFT 141 (419)
Q Consensus 71 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~i---wd~~~~~~~~-----~~~-~~~~~~~~~~~ 141 (419)
.+.+.+++.++... .....|..+.|||||+.++.... + +|.+ -....|+... +.. ....+..+.|.
T Consensus 431 ql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~~-g-~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~W~ 505 (591)
T PRK13616 431 QLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMIIG-G-KVYLAVVEQTEDGQYALTNPREVGPGLGDTAVSLDWR 505 (591)
T ss_pred eEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEEC-C-EEEEEEEEeCCCCceeecccEEeecccCCccccceEe
Confidence 33333444443322 33457999999999999998874 3 7777 4444554211 222 22335789999
Q ss_pred cCCCEEEEEeecCCCCeEEEEeccC
Q 014755 142 QDGKFAAICTRRDCKDYINLLSCHT 166 (419)
Q Consensus 142 ~~~~~l~~~~~~~~~g~v~i~d~~~ 166 (419)
.++.++ ++..+ .+..++..++..
T Consensus 506 ~~~~L~-V~~~~-~~~~v~~v~vDG 528 (591)
T PRK13616 506 TGDSLV-VGRSD-PEHPVWYVNLDG 528 (591)
T ss_pred cCCEEE-EEecC-CCCceEEEecCC
Confidence 999855 54443 223465556653
No 367
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=98.08 E-value=0.0043 Score=51.43 Aligned_cols=163 Identities=14% Similarity=0.060 Sum_probs=99.6
Q ss_pred ceeEEEEecCCCeEEEEe--ccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEE-cCCCe-
Q 014755 49 KISYIEWALDSEYILCGL--YKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWS-LLNTA- 124 (419)
Q Consensus 49 ~v~~~~~s~~~~~l~~~~--~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd-~~~~~- 124 (419)
.+.+.+++++++.+|+.. .+...++++.. +.....+. ....+....|++++...++...+. ..+++. ..+++
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~--~~~~~~~~-~g~~l~~PS~d~~g~~W~v~~~~~-~~~~~~~~~~g~~ 100 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPA--GGPVRPVL-TGGSLTRPSWDPDGWVWTVDDGSG-GVRVVRDSASGTG 100 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcC--CCcceeec-cCCccccccccCCCCEEEEEcCCC-ceEEEEecCCCcc
Confidence 688999999999988876 33335555543 33333332 223688899999977666655444 555553 33333
Q ss_pred -EEEeccCC--CCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC---C------eEEEEEeccccceeeeeECCCCCeE
Q 014755 125 -CVHVQSPK--HASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT---W------EIMGVFAVDTLDLADIEWSPDDSAI 192 (419)
Q Consensus 125 -~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~---~------~~~~~~~~~~~~v~~~~~~~~~~~l 192 (419)
...+.... ..|..+.+||||..++....++..+.|++--+.. + ............+..+.|.+++.++
T Consensus 101 ~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~ 180 (253)
T PF10647_consen 101 EPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLV 180 (253)
T ss_pred eeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEE
Confidence 33332222 2799999999999999888665557888765532 2 1112222234578999999999877
Q ss_pred EEEcCCCCceEEE-EcCCCceEEEE
Q 014755 193 VIWDSPLEYKVLI-YSPDGRCLLKY 216 (419)
Q Consensus 193 ~~~~~~~~~~i~~-~d~~~~~~~~~ 216 (419)
+.... .+..+.. ....|.....+
T Consensus 181 V~~~~-~~~~~~~~v~~dG~~~~~l 204 (253)
T PF10647_consen 181 VLGRS-AGGPVVRLVSVDGGPSTPL 204 (253)
T ss_pred EEeCC-CCCceeEEEEccCCccccc
Confidence 76433 3333333 44455444443
No 368
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=98.08 E-value=0.00019 Score=67.63 Aligned_cols=131 Identities=20% Similarity=0.270 Sum_probs=89.6
Q ss_pred CeEEEEeccCCeEEEEEeccccc-eeeeeECCCCC-------eEEEEcCCCCceEEEEcC--CCceEEEEee--cCCCCc
Q 014755 157 DYINLLSCHTWEIMGVFAVDTLD-LADIEWSPDDS-------AIVIWDSPLEYKVLIYSP--DGRCLLKYQA--YESGLG 224 (419)
Q Consensus 157 g~v~i~d~~~~~~~~~~~~~~~~-v~~~~~~~~~~-------~l~~~~~~~~~~i~~~d~--~~~~~~~~~~--~~~~~~ 224 (419)
..|+-.|+..|+.+..+..+... |..++ |+.+ ..++ +-.++.+..||+ .+..+..-.. ......
T Consensus 504 ~~ly~mDLe~GKVV~eW~~~~~~~v~~~~--p~~K~aqlt~e~tfl--Gls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~ 579 (794)
T PF08553_consen 504 NKLYKMDLERGKVVEEWKVHDDIPVVDIA--PDSKFAQLTNEQTFL--GLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNN 579 (794)
T ss_pred CceEEEecCCCcEEEEeecCCCcceeEec--ccccccccCCCceEE--EECCCceEEeccCCCCCceeeccccccccCCC
Confidence 68999999999999999987644 44443 4321 1222 344788999999 5533322111 112235
Q ss_pred eeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccC
Q 014755 225 VKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATN 304 (419)
Q Consensus 225 v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (419)
..|++-+.+| +||+|+.+|.||+||- .|+.-+
T Consensus 580 Fs~~aTt~~G-~iavgs~~G~IRLyd~-~g~~AK---------------------------------------------- 611 (794)
T PF08553_consen 580 FSCFATTEDG-YIAVGSNKGDIRLYDR-LGKRAK---------------------------------------------- 611 (794)
T ss_pred ceEEEecCCc-eEEEEeCCCcEEeecc-cchhhh----------------------------------------------
Confidence 7788888777 8999999999999993 221111
Q ss_pred CceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeec
Q 014755 305 GHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDI 364 (419)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~ 364 (419)
+.+++-..+|..|..+.||+++++.+. ..|.++++
T Consensus 612 ----------------------T~lp~lG~pI~~iDvt~DGkwilaTc~---tyLlLi~t 646 (794)
T PF08553_consen 612 ----------------------TALPGLGDPIIGIDVTADGKWILATCK---TYLLLIDT 646 (794)
T ss_pred ----------------------hcCCCCCCCeeEEEecCCCcEEEEeec---ceEEEEEE
Confidence 113345677999999999999988887 67888875
No 369
>KOG1008 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=97.90 E-value=3.8e-06 Score=74.27 Aligned_cols=198 Identities=14% Similarity=0.135 Sum_probs=124.6
Q ss_pred CcceeEEEEecCC--CeEEEEeccCCeEEEEEccCCcc--eeeeecCCccEeEEEECC-CCCEEEEEe---cCCCeEEEE
Q 014755 47 LDKISYIEWALDS--EYILCGLYKRLMIQAWSLTQPEW--TCKIDEGLAGIAYARWSP-DSRHILTTS---DFQLRLTVW 118 (419)
Q Consensus 47 ~~~v~~~~~s~~~--~~l~~~~~~~g~i~iw~~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~l~~~~---~~~~~i~iw 118 (419)
...+.|+++.-+. ..+++|..+ |.|.+-......- .....++....++++|++ |.+.|+++- ..+..+.||
T Consensus 56 tqy~kcva~~y~~d~cIlavG~at-G~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iw 134 (783)
T KOG1008|consen 56 TQYVKCVASFYGNDRCILAVGSAT-GNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIW 134 (783)
T ss_pred CCCceeehhhcCCchhhhhhcccc-CceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccce
Confidence 4567788776644 356677766 8999887764422 223456777899999998 455566552 122379999
Q ss_pred EcCCCe--EEE---ecc-CCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECC-CCCe
Q 014755 119 SLLNTA--CVH---VQS-PKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSP-DDSA 191 (419)
Q Consensus 119 d~~~~~--~~~---~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~ 191 (419)
|+.++- +.. +.. ......+++|..+.+.+.+|... ..+.++|++.. ...........+..+...| .+.+
T Consensus 135 di~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~s---r~~~ifdlRqs-~~~~~svnTk~vqG~tVdp~~~nY 210 (783)
T KOG1008|consen 135 DINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTS---RSVHIFDLRQS-LDSVSSVNTKYVQGITVDPFSPNY 210 (783)
T ss_pred ecccccCCCccccccccccccCccccccccCcchhhccccc---chhhhhhhhhh-hhhhhhhhhhhcccceecCCCCCc
Confidence 999862 211 222 33445788888777888777664 68999999832 2222222334567778888 6777
Q ss_pred EEEEcCCCCceEEEEcC---CCceEEEEeecCC--CCceeEEEEccCCC-eEEEEEe-cCcEEEEEcC
Q 014755 192 IVIWDSPLEYKVLIYSP---DGRCLLKYQAYES--GLGVKSISWSPCGQ-FLAVGSY-DQTLRVLNHL 252 (419)
Q Consensus 192 l~~~~~~~~~~i~~~d~---~~~~~~~~~~~~~--~~~v~~~~~s~~~~-~l~~~~~-d~~i~v~d~~ 252 (419)
++. ..++.|.+||. -.+++..+..... ...+..++|.|... .+++... .++|+++|+.
T Consensus 211 ~cs---~~dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~ 275 (783)
T KOG1008|consen 211 FCS---NSDGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC 275 (783)
T ss_pred eec---cccCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence 775 44899999994 1222222221111 12488999999543 4455544 5789999975
No 370
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.87 E-value=0.0076 Score=47.31 Aligned_cols=222 Identities=11% Similarity=0.060 Sum_probs=118.3
Q ss_pred ECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCC--CEEEEEeecCCCCeEEEEeccC--CeEEEEE
Q 014755 98 WSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDG--KFAAICTRRDCKDYINLLSCHT--WEIMGVF 173 (419)
Q Consensus 98 ~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~g~v~i~d~~~--~~~~~~~ 173 (419)
|....+.|+...-..+.|.-||..+.+..+.........++.+--.+ +..+++... +-.|.-||... ....+++
T Consensus 22 w~~~~~sLl~VDi~ag~v~r~D~~qn~v~ra~ie~p~~ag~ilpv~~~~q~~~v~~G~--kf~i~nwd~~~~~a~v~~t~ 99 (310)
T KOG4499|consen 22 WDVERQSLLYVDIEAGEVHRYDIEQNKVYRAKIEGPPSAGFILPVEGGPQEFAVGCGS--KFVIVNWDGVSESAKVYRTL 99 (310)
T ss_pred eEEecceEEEEEeccCceehhhhhhhheEEEEEecCcceeEEEEecCCCceEEEeecc--eEEEEEcccccceeeeeeec
Confidence 44444555555544447777998887666633333334444443222 334443322 11344466322 2222221
Q ss_pred ec-----cccceeeeeECCCCCeEEEE--cC-----CCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEE-
Q 014755 174 AV-----DTLDLADIEWSPDDSAIVIW--DS-----PLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVG- 240 (419)
Q Consensus 174 ~~-----~~~~v~~~~~~~~~~~l~~~--~~-----~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~- 240 (419)
.. .....+.-..+|+|++..-. +. ...+.++.|-+.++......... --+.++|+.+.+.+...
T Consensus 100 ~ev~~d~kknR~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~h~v~~i~~~v~---IsNgl~Wd~d~K~fY~iD 176 (310)
T KOG4499|consen 100 FEVQPDRKKNRLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLAGHQVELIWNCVG---ISNGLAWDSDAKKFYYID 176 (310)
T ss_pred cccCchHHhcccccCccCCCCceeeeeeccccccccccccEEEEeccCCCceeeehhcc---CCccccccccCcEEEEEc
Confidence 11 13445667788999985421 11 11366777776555444333222 35678999887766554
Q ss_pred EecCcEEEEE--cCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCC
Q 014755 241 SYDQTLRVLN--HLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPI 318 (419)
Q Consensus 241 ~~d~~i~v~d--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (419)
+.+-+|.-|| ..+|.....- .++++...
T Consensus 177 sln~~V~a~dyd~~tG~~snr~------------------------------------------------~i~dlrk~-- 206 (310)
T KOG4499|consen 177 SLNYEVDAYDYDCPTGDLSNRK------------------------------------------------VIFDLRKS-- 206 (310)
T ss_pred cCceEEeeeecCCCcccccCcc------------------------------------------------eeEEeccC--
Confidence 4556776677 5555432211 01111100
Q ss_pred CCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc-cCCCeeEEEeCC
Q 014755 319 SLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV-QKDPIRAATWDP 386 (419)
Q Consensus 319 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~ 386 (419)
++...+ .--.+++..+|.+.++.-.. ++|...|..+|+++..+. ....|++++|--
T Consensus 207 -----~~~e~~-----~PDGm~ID~eG~L~Va~~ng--~~V~~~dp~tGK~L~eiklPt~qitsccFgG 263 (310)
T KOG4499|consen 207 -----QPFESL-----EPDGMTIDTEGNLYVATFNG--GTVQKVDPTTGKILLEIKLPTPQITSCCFGG 263 (310)
T ss_pred -----CCcCCC-----CCCcceEccCCcEEEEEecC--cEEEEECCCCCcEEEEEEcCCCceEEEEecC
Confidence 000000 00124556678877777666 999999999999887765 678899999953
No 371
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.87 E-value=0.0019 Score=61.14 Aligned_cols=149 Identities=13% Similarity=0.160 Sum_probs=97.2
Q ss_pred CCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEcc-----CCCeEEEEEecCcEEEEEcCCce--eee
Q 014755 187 PDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSP-----CGQFLAVGSYDQTLRVLNHLTWK--TFA 258 (419)
Q Consensus 187 ~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~-----~~~~l~~~~~d~~i~v~d~~~~~--~~~ 258 (419)
...+.+++.+......|+-.|+ .|+.+..+..+... +|..++-.. +....+.|-.+..+..||.+-.. ++.
T Consensus 490 ~~d~~mil~~~~~~~~ly~mDLe~GKVV~eW~~~~~~-~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~ 568 (794)
T PF08553_consen 490 DQDRNMILLDPNNPNKLYKMDLERGKVVEEWKVHDDI-PVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVD 568 (794)
T ss_pred ccccceEeecCCCCCceEEEecCCCcEEEEeecCCCc-ceeEecccccccccCCCceEEEECCCceEEeccCCCCCceee
Confidence 3445566656666788999999 99999999887652 244443221 12344566667789999987422 110
Q ss_pred eecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEE
Q 014755 259 EFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGL 338 (419)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 338 (419)
.-.+ .| ......+|
T Consensus 569 ~~~k-----------~Y-------------------------------------------------------~~~~~Fs~ 582 (794)
T PF08553_consen 569 SQSK-----------QY-------------------------------------------------------SSKNNFSC 582 (794)
T ss_pred cccc-----------cc-------------------------------------------------------ccCCCceE
Confidence 0000 00 12233678
Q ss_pred EEEccCCeEEEEecCCCCceEEEeeccCCCceeec-ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 339 MSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL-VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 339 ~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
++-+.+| +||+|+.+ |.||+||--..+....+ +-..+|..|..+.||++|+..+ +..+.+++..
T Consensus 583 ~aTt~~G-~iavgs~~--G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc-~tyLlLi~t~ 647 (794)
T PF08553_consen 583 FATTEDG-YIAVGSNK--GDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATC-KTYLLLIDTL 647 (794)
T ss_pred EEecCCc-eEEEEeCC--CcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEee-cceEEEEEEe
Confidence 8877777 57888888 99999995443333444 4678999999999999887554 4667777753
No 372
>KOG2395 consensus Protein involved in vacuole import and degradation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.83 E-value=0.0029 Score=55.53 Aligned_cols=149 Identities=15% Similarity=0.203 Sum_probs=98.7
Q ss_pred ccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEE-----cCCCCceEEEEcC--CCc-e
Q 014755 141 TQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIW-----DSPLEYKVLIYSP--DGR-C 212 (419)
Q Consensus 141 ~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-----~~~~~~~i~~~d~--~~~-~ 212 (419)
..+.++|+..+.. ...++-.|++.|+.+..+..+.. |.-+.+.|+.+.--.. -+-.++.|.-||+ .+. .
T Consensus 342 ~~dsnlil~~~~~--~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~k 418 (644)
T KOG2395|consen 342 RADSNLILMDGGE--QDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNK 418 (644)
T ss_pred ccccceEeeCCCC--cCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcce
Confidence 3444555554432 35799999999999999988765 7777777876432110 0345788999999 554 3
Q ss_pred EEEEeecCC--CCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeee
Q 014755 213 LLKYQAYES--GLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELC 290 (419)
Q Consensus 213 ~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (419)
+...+.+.- .....|++-..+| +|++||.+|.||+||- .+...++
T Consensus 419 l~~~q~kqy~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdr-i~~~AKT------------------------------- 465 (644)
T KOG2395|consen 419 LAVVQSKQYSTKNNFSCFATTESG-YIVVGSLKGDIRLYDR-IGRRAKT------------------------------- 465 (644)
T ss_pred eeeeeccccccccccceeeecCCc-eEEEeecCCcEEeehh-hhhhhhh-------------------------------
Confidence 333333221 1235566666666 8999999999999995 3322221
Q ss_pred ccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeecc
Q 014755 291 LNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDIC 365 (419)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~ 365 (419)
.+++-..+|..+..+.||++|++.+. ..+.+.++.
T Consensus 466 -------------------------------------AlPgLG~~I~hVdvtadGKwil~Tc~---tyLlLi~t~ 500 (644)
T KOG2395|consen 466 -------------------------------------ALPGLGDAIKHVDVTADGKWILATCK---TYLLLIDTL 500 (644)
T ss_pred -------------------------------------cccccCCceeeEEeeccCcEEEEecc---cEEEEEEEe
Confidence 13345667999999999999988877 577777653
No 373
>KOG1897 consensus Damage-specific DNA binding complex, subunit DDB1 [Replication, recombination and repair]
Probab=97.81 E-value=0.035 Score=52.96 Aligned_cols=312 Identities=13% Similarity=0.126 Sum_probs=170.1
Q ss_pred EcCCCCEEEEEe-CCeEE--EEecCCCcEEEEe---ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeec
Q 014755 15 FSPNARYIAVAV-DYRLV--VRDAHSFKVVQLF---SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDE 88 (419)
Q Consensus 15 ~s~d~~~la~~~-~~~i~--i~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~ 88 (419)
|--|+.+|.++. +|.+. +.|..++...... -...++.--.|+..++.-+.+.+|+ -..+|.- ++++...-..
T Consensus 591 ~e~d~~yLlvalgdG~l~~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~vfa~sdr-P~viY~~-n~kLv~spls 668 (1096)
T KOG1897|consen 591 FEGDIHYLLVALGDGALLYFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAVFALSDR-PTVIYSS-NGKLVYSPLS 668 (1096)
T ss_pred eeccceEEEEEcCCceEEEEEEEcccceEccccccccCCCCcEEEEEeeCCceEEEEeCCC-CEEEEec-CCcEEEeccc
Confidence 444566777775 67655 4566666544322 1456677677776555444444453 4444542 3333322111
Q ss_pred CCccEeE-EEECCC--CCEEEEEecCCCeEEEEEcCCCeEEE--eccCCCCeeeEEEccCCCEEEEEeec----------
Q 014755 89 GLAGIAY-ARWSPD--SRHILTTSDFQLRLTVWSLLNTACVH--VQSPKHASKGVAFTQDGKFAAICTRR---------- 153 (419)
Q Consensus 89 ~~~~v~~-~~~~~~--~~~l~~~~~~~~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~---------- 153 (419)
- ..+.. +.|+.+ ...++++..+ .+++..+..-+.+. ..........+++.+....+.+.+..
T Consensus 669 ~-kev~~~c~f~s~a~~d~l~~~~~~--~l~i~tid~iqkl~irtvpl~~~prrI~~q~~sl~~~v~s~r~e~~~~~~~e 745 (1096)
T KOG1897|consen 669 L-KEVNHMCPFNSDAYPDSLASANGG--ALTIGTIDEIQKLHIRTVPLGESPRRICYQESSLTFGVLSNRIESSAEYYGE 745 (1096)
T ss_pred h-HHhhhhcccccccCCceEEEecCC--ceEEEEecchhhcceeeecCCCChhheEecccceEEEEEecccccchhhcCC
Confidence 1 11111 223222 2345555443 67777666422222 22233344667776644444433321
Q ss_pred -CCCCeEEEEeccCCeEEEEEeccc----cceeeeeECCC-CCeEEEEcC--------CCCceEEEEcC-CCceEEEEee
Q 014755 154 -DCKDYINLLSCHTWEIMGVFAVDT----LDLADIEWSPD-DSAIVIWDS--------PLEYKVLIYSP-DGRCLLKYQA 218 (419)
Q Consensus 154 -~~~g~v~i~d~~~~~~~~~~~~~~----~~v~~~~~~~~-~~~l~~~~~--------~~~~~i~~~d~-~~~~~~~~~~ 218 (419)
..-..++++|-++.+.+...+... ..+.++.|..| +.++++..+ ...|.|.+|.. +++.++....
T Consensus 746 e~~~s~l~vlD~nTf~vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e 825 (1096)
T KOG1897|consen 746 EYEVSFLRVLDQNTFEVLSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAE 825 (1096)
T ss_pred cceEEEEEEecCCceeEEeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeee
Confidence 001256777877766655433322 23556668877 556655211 12378888877 4355555444
Q ss_pred cCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccc
Q 014755 219 YESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQG 298 (419)
Q Consensus 219 ~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (419)
+.-.+.+.++..- +|+++|.-+ ..|++|+..+.+.++.-.
T Consensus 826 ~~v~Gav~aL~~f-ngkllA~In--~~vrLye~t~~~eLr~e~------------------------------------- 865 (1096)
T KOG1897|consen 826 TVVKGAVYALVEF-NGKLLAGIN--QSVRLYEWTTERELRIEC------------------------------------- 865 (1096)
T ss_pred eeeccceeehhhh-CCeEEEecC--cEEEEEEccccceehhhh-------------------------------------
Confidence 3333345554322 566666544 479999988775544321
Q ss_pred cccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEe--eccCCCceeecc--
Q 014755 299 NSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIW--DICRQEPAAILV-- 374 (419)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iw--d~~~~~~~~~~~-- 374 (419)
.+..++..+...-.|..++.|.-- +.+.+. +-..|.+...-.
T Consensus 866 --------------------------------~~~~~~~aL~l~v~gdeI~VgDlm--~Sitll~y~~~eg~f~evArD~ 911 (1096)
T KOG1897|consen 866 --------------------------------NISNPIIALDLQVKGDEIAVGDLM--RSITLLQYKGDEGNFEEVARDY 911 (1096)
T ss_pred --------------------------------cccCCeEEEEEEecCcEEEEeecc--ceEEEEEEeccCCceEEeehhh
Confidence 244557788888899999999875 665554 444455665553
Q ss_pred cCCCeeEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 375 QKDPIRAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 375 ~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
+..+.+++.+-.+..++. +..+|.+++-..+
T Consensus 912 ~p~Wmtaveil~~d~ylg-ae~~gNlf~v~~d 942 (1096)
T KOG1897|consen 912 NPNWMTAVEILDDDTYLG-AENSGNLFTVRKD 942 (1096)
T ss_pred CccceeeEEEecCceEEe-ecccccEEEEEec
Confidence 788899998876665554 5567777766554
No 374
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=97.77 E-value=0.018 Score=48.72 Aligned_cols=144 Identities=13% Similarity=0.132 Sum_probs=86.9
Q ss_pred CCCCEEEEEecCCCeEEEEEcCC-CeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEE-----
Q 014755 100 PDSRHILTTSDFQLRLTVWSLLN-TACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVF----- 173 (419)
Q Consensus 100 ~~~~~l~~~~~~~~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~----- 173 (419)
..++.|+.|.++| +.++++.. ...... .....|..+...|+-+.+++-+. +.++++++.........
T Consensus 5 ~~~~~L~vGt~~G--l~~~~~~~~~~~~~i-~~~~~I~ql~vl~~~~~llvLsd----~~l~~~~L~~l~~~~~~~~~~~ 77 (275)
T PF00780_consen 5 SWGDRLLVGTEDG--LYVYDLSDPSKPTRI-LKLSSITQLSVLPELNLLLVLSD----GQLYVYDLDSLEPVSTSAPLAF 77 (275)
T ss_pred cCCCEEEEEECCC--EEEEEecCCccceeE-eecceEEEEEEecccCEEEEEcC----CccEEEEchhhccccccccccc
Confidence 4677888887665 89999833 333332 22333899999888877777664 69999999764433311
Q ss_pred ---------eccccceeeee---ECCCCCeEEEEcCCCCceEEEEcC-CC-----ceEEEEeecCCCCceeEEEEccCCC
Q 014755 174 ---------AVDTLDLADIE---WSPDDSAIVIWDSPLEYKVLIYSP-DG-----RCLLKYQAYESGLGVKSISWSPCGQ 235 (419)
Q Consensus 174 ---------~~~~~~v~~~~---~~~~~~~l~~~~~~~~~~i~~~d~-~~-----~~~~~~~~~~~~~~v~~~~~s~~~~ 235 (419)
......+...+ -......+++ ....+|.+|.. .. +..+.+.... .+..++|. ++
T Consensus 78 ~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~v---a~kk~i~i~~~~~~~~~f~~~~ke~~lp~---~~~~i~~~--~~ 149 (275)
T PF00780_consen 78 PKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCV---AVKKKILIYEWNDPRNSFSKLLKEISLPD---PPSSIAFL--GN 149 (275)
T ss_pred cccccccccccccCCeeEEeeccccccceEEEE---EECCEEEEEEEECCcccccceeEEEEcCC---CcEEEEEe--CC
Confidence 01112333333 1223334444 22458888777 21 3445555443 68999998 55
Q ss_pred eEEEEEecCcEEEEEcCCceeeee
Q 014755 236 FLAVGSYDQTLRVLNHLTWKTFAE 259 (419)
Q Consensus 236 ~l~~~~~d~~i~v~d~~~~~~~~~ 259 (419)
.++.|..+ ...+.|+.++.....
T Consensus 150 ~i~v~~~~-~f~~idl~~~~~~~l 172 (275)
T PF00780_consen 150 KICVGTSK-GFYLIDLNTGSPSEL 172 (275)
T ss_pred EEEEEeCC-ceEEEecCCCCceEE
Confidence 77777654 578889887665443
No 375
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=97.77 E-value=0.014 Score=47.48 Aligned_cols=172 Identities=13% Similarity=0.054 Sum_probs=107.8
Q ss_pred eEEcCCCCEEEEEe-C--CeEEEEecCCCcEEEEeecCcc--eeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeee
Q 014755 13 SCFSPNARYIAVAV-D--YRLVVRDAHSFKVVQLFSCLDK--ISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKID 87 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~--~~i~i~~~~~~~~~~~~~~~~~--v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~ 87 (419)
+.|..+|.++-+.+ . ..|+.+|+.+++..+...-... -..+... ++.|.--...++...+||.++.+.+.++.
T Consensus 50 L~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~--~d~l~qLTWk~~~~f~yd~~tl~~~~~~~ 127 (264)
T PF05096_consen 50 LEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITIL--GDKLYQLTWKEGTGFVYDPNTLKKIGTFP 127 (264)
T ss_dssp EEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEE--TTEEEEEESSSSEEEEEETTTTEEEEEEE
T ss_pred EEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEE--CCEEEEEEecCCeEEEEccccceEEEEEe
Confidence 67777787777665 3 4599999999998876553332 2334444 44566556666899999999988877764
Q ss_pred cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE---eccCCCCe---eeEEEccCCCEEEEEeecCCCCeEEE
Q 014755 88 EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH---VQSPKHAS---KGVAFTQDGKFAAICTRRDCKDYINL 161 (419)
Q Consensus 88 ~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~---~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~g~v~i 161 (419)
-. ..=..++ .|++.|+.+.... .+..+|.++-+... ......++ +.+.+- +|...|=.-.. ..|..
T Consensus 128 y~-~EGWGLt--~dg~~Li~SDGS~-~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G~IyANVW~t---d~I~~ 199 (264)
T PF05096_consen 128 YP-GEGWGLT--SDGKRLIMSDGSS-RLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NGKIYANVWQT---DRIVR 199 (264)
T ss_dssp -S-SS--EEE--ECSSCEEEE-SSS-EEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TTEEEEEETTS---SEEEE
T ss_pred cC-CcceEEE--cCCCEEEEECCcc-ceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cCEEEEEeCCC---CeEEE
Confidence 33 4445666 5677777776655 89999988754443 23233333 556664 45433333222 57888
Q ss_pred EeccCCeEEEEEecc---------------ccceeeeeECCCCCeEEE
Q 014755 162 LSCHTWEIMGVFAVD---------------TLDLADIEWSPDDSAIVI 194 (419)
Q Consensus 162 ~d~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~l~~ 194 (419)
.|..+|+....+... ..-.+.+++.|....+.+
T Consensus 200 Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~v 247 (264)
T PF05096_consen 200 IDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFV 247 (264)
T ss_dssp EETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEE
T ss_pred EeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEE
Confidence 999999988776421 133688999988888777
No 376
>KOG1897 consensus Damage-specific DNA binding complex, subunit DDB1 [Replication, recombination and repair]
Probab=97.77 E-value=0.04 Score=52.55 Aligned_cols=367 Identities=11% Similarity=0.056 Sum_probs=174.4
Q ss_pred CCCEEEEEeC-CeEEEEecCCCcEEEEee--cCcceeEEEEecC--C----CeEEEEeccCCeEEEEEccCCcceeee-e
Q 014755 18 NARYIAVAVD-YRLVVRDAHSFKVVQLFS--CLDKISYIEWALD--S----EYILCGLYKRLMIQAWSLTQPEWTCKI-D 87 (419)
Q Consensus 18 d~~~la~~~~-~~i~i~~~~~~~~~~~~~--~~~~v~~~~~s~~--~----~~l~~~~~~~g~i~iw~~~~~~~~~~~-~ 87 (419)
+...++.++. ..+...++..+.+..... ....|.|+.++|- + +.+++|.+++-.+.+.-+.+...+... .
T Consensus 498 n~sqVvvA~~~~~l~y~~i~~~~l~e~~~~~~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~~~~~~l 577 (1096)
T KOG1897|consen 498 NASQVVVAGGGLALFYLEIEDGGLREVSHKEFEYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDLILITHEQL 577 (1096)
T ss_pred cceEEEEecCccEEEEEEeeccceeeeeeheecceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCcceeeeecc
Confidence 3344444543 444445555554333222 3568999999984 2 368888887534444444444333222 1
Q ss_pred c---CCccEeEEEECCCCCEEEEEecCCCeEEEEEcC--CCeEEE---eccCCCCeeeEEEccCCCEEEEEeecCCCCeE
Q 014755 88 E---GLAGIAYARWSPDSRHILTTSDFQLRLTVWSLL--NTACVH---VQSPKHASKGVAFTQDGKFAAICTRRDCKDYI 159 (419)
Q Consensus 88 ~---~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~--~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v 159 (419)
. -+..|.-..|-.|..+|+++..+| .+.-+-+. ++.... ......++.--.|+..++.-+.+..| .-.
T Consensus 578 ~~~~iPRSIl~~~~e~d~~yLlvalgdG-~l~~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~vfa~sd---rP~ 653 (1096)
T KOG1897|consen 578 SGEIIPRSILLTTFEGDIHYLLVALGDG-ALLYFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAVFALSD---RPT 653 (1096)
T ss_pred CCCccchheeeEEeeccceEEEEEcCCc-eEEEEEEEcccceEccccccccCCCCcEEEEEeeCCceEEEEeCC---CCE
Confidence 1 123455566666788888888877 77666544 443322 12233344444555555443333333 234
Q ss_pred EEEeccCCeEEEE-Eeccccceee-eeECCC--CCeEEEEcCCCCceEEEEcC---CCceEEEEeecCCCCceeEEEEcc
Q 014755 160 NLLSCHTWEIMGV-FAVDTLDLAD-IEWSPD--DSAIVIWDSPLEYKVLIYSP---DGRCLLKYQAYESGLGVKSISWSP 232 (419)
Q Consensus 160 ~i~d~~~~~~~~~-~~~~~~~v~~-~~~~~~--~~~l~~~~~~~~~~i~~~d~---~~~~~~~~~~~~~~~~v~~~~~s~ 232 (419)
.+|.-+ ++.+.. +... .+.. ..|+.+ ...++.. ..+.+.+.-+ ..-.++++..+. .+..+++.+
T Consensus 654 viY~~n-~kLv~spls~k--ev~~~c~f~s~a~~d~l~~~---~~~~l~i~tid~iqkl~irtvpl~~---~prrI~~q~ 724 (1096)
T KOG1897|consen 654 VIYSSN-GKLVYSPLSLK--EVNHMCPFNSDAYPDSLASA---NGGALTIGTIDEIQKLHIRTVPLGE---SPRRICYQE 724 (1096)
T ss_pred EEEecC-CcEEEeccchH--HhhhhcccccccCCceEEEe---cCCceEEEEecchhhcceeeecCCC---ChhheEecc
Confidence 444433 222211 1111 1111 112211 2234442 2345555544 223334444333 467777777
Q ss_pred CCCeEEEEEec--------------CcEEEEEcCCceeeeeeccc--ccccCCCccceeccCCCcccccceeeeccCccc
Q 014755 233 CGQFLAVGSYD--------------QTLRVLNHLTWKTFAEFMHL--STVRGPCFPAVFKEVDEPLQLDMSELCLNDDFI 296 (419)
Q Consensus 233 ~~~~l~~~~~d--------------~~i~v~d~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (419)
....+++.+.. ..++++|-++.+.+...+.. ..+.+ .....|.. +. -..++++....
T Consensus 725 ~sl~~~v~s~r~e~~~~~~~ee~~~s~l~vlD~nTf~vl~~hef~~~E~~~S-i~s~~~~~-----d~-~t~~vVGT~~v 797 (1096)
T KOG1897|consen 725 SSLTFGVLSNRIESSAEYYGEEYEVSFLRVLDQNTFEVLSSHEFERNETALS-IISCKFTD-----DP-NTYYVVGTGLV 797 (1096)
T ss_pred cceEEEEEecccccchhhcCCcceEEEEEEecCCceeEEeeccccccceeee-eeeeeecC-----CC-ceEEEEEEEee
Confidence 44444443321 24778887776665544311 11100 00001111 00 12222222221
Q ss_pred cccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec-cc
Q 014755 297 QGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL-VQ 375 (419)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~-~~ 375 (419)
-.-.......-..++.+.. ..+ .+...+. .-.+.+.++.. -+|+++|.-+ ..|++|++.+.+.++.- .+
T Consensus 798 ~Pde~ep~~GRIivfe~~e-~~~---L~~v~e~-~v~Gav~aL~~-fngkllA~In----~~vrLye~t~~~eLr~e~~~ 867 (1096)
T KOG1897|consen 798 YPDENEPVNGRIIVFEFEE-LNS---LELVAET-VVKGAVYALVE-FNGKLLAGIN----QSVRLYEWTTERELRIECNI 867 (1096)
T ss_pred ccCCCCcccceEEEEEEec-CCc---eeeeeee-eeccceeehhh-hCCeEEEecC----cEEEEEEccccceehhhhcc
Confidence 1111111112222233222 000 0000000 01122222221 3678877765 67999999998655554 58
Q ss_pred CCCeeEEEeCCCCCeEEEEeCCCcEEEeecC--CCeEEecC
Q 014755 376 KDPIRAATWDPTCTRLVLCTGSSHLYMWTPS--GAYCVSNP 414 (419)
Q Consensus 376 ~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~--~~~~~~~~ 414 (419)
..++..+...-.|..++.|.--+.+.+-... .|....+.
T Consensus 868 ~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~eg~f~evA 908 (1096)
T KOG1897|consen 868 SNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDEGNFEEVA 908 (1096)
T ss_pred cCCeEEEEEEecCcEEEEeeccceEEEEEEeccCCceEEee
Confidence 8999999999999999999887776665444 44455544
No 377
>KOG4640 consensus Anaphase-promoting complex (APC), subunit 4 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=97.74 E-value=0.00015 Score=64.49 Aligned_cols=76 Identities=13% Similarity=0.216 Sum_probs=66.0
Q ss_pred cceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc-cCCCee-EEEeCCCCCeEEEEeCCCcEEEeecCCCeEE
Q 014755 334 QGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV-QKDPIR-AATWDPTCTRLVLCTGSSHLYMWTPSGAYCV 411 (419)
Q Consensus 334 ~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~-~~~~v~-~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~ 411 (419)
..+..+.|+|.-.++|.+..+ |.|.+..++ .+.+..+. |...++ +++|.|||+.||.|-.||+|++-|++++..+
T Consensus 21 ~~i~~~ewnP~~dLiA~~t~~--gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l 97 (665)
T KOG4640|consen 21 INIKRIEWNPKMDLIATRTEK--GELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRL 97 (665)
T ss_pred cceEEEEEcCccchhheeccC--CcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCce
Confidence 457889999999999999998 999999988 55566665 777777 9999999999999999999999999976655
Q ss_pred e
Q 014755 412 S 412 (419)
Q Consensus 412 ~ 412 (419)
.
T Consensus 98 ~ 98 (665)
T KOG4640|consen 98 V 98 (665)
T ss_pred e
Confidence 4
No 378
>KOG1008 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=97.66 E-value=1.2e-05 Score=71.22 Aligned_cols=186 Identities=10% Similarity=0.159 Sum_probs=117.2
Q ss_pred CCCEEEEEe-CCeEEEEecCCCc---EEEEeecCcceeEEEEec-CCCeEEEEec---cCCeEEEEEccCC--cce--ee
Q 014755 18 NARYIAVAV-DYRLVVRDAHSFK---VVQLFSCLDKISYIEWAL-DSEYILCGLY---KRLMIQAWSLTQP--EWT--CK 85 (419)
Q Consensus 18 d~~~la~~~-~~~i~i~~~~~~~---~~~~~~~~~~v~~~~~s~-~~~~l~~~~~---~~g~i~iw~~~~~--~~~--~~ 85 (419)
|...+++|. +|.|.+-...... ...+-++....++++|++ |...||+|-. .+..+.|||+.++ .+. ..
T Consensus 69 d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~ 148 (783)
T KOG1008|consen 69 DRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPL 148 (783)
T ss_pred chhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCccccc
Confidence 446777776 7888876654322 222334678899999998 5666776632 1357899999876 111 11
Q ss_pred eec-CCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEcc-CCCEEEEEeecCCCCeEEEEe
Q 014755 86 IDE-GLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQ-DGKFAAICTRRDCKDYINLLS 163 (419)
Q Consensus 86 ~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~g~v~i~d 163 (419)
+.. ......+++|-.+.+.+++|.... .+.++|++.............+..+...| .+.+++.-.. |.|-+||
T Consensus 149 fs~~~l~gqns~cwlrd~klvlaGm~sr-~~~ifdlRqs~~~~~svnTk~vqG~tVdp~~~nY~cs~~d----g~iAiwD 223 (783)
T KOG1008|consen 149 FSSSTLDGQNSVCWLRDTKLVLAGMTSR-SVHIFDLRQSLDSVSSVNTKYVQGITVDPFSPNYFCSNSD----GDIAIWD 223 (783)
T ss_pred cccccccCccccccccCcchhhcccccc-hhhhhhhhhhhhhhhhhhhhhcccceecCCCCCceecccc----Cceeecc
Confidence 222 223456888888888888887766 89999998533222222334567788888 6678877663 7999999
Q ss_pred -ccCC-eEEEEEeccc----cceeeeeECCCCCeEEEEcCCCCceEEEEcC
Q 014755 164 -CHTW-EIMGVFAVDT----LDLADIEWSPDDSAIVIWDSPLEYKVLIYSP 208 (419)
Q Consensus 164 -~~~~-~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~ 208 (419)
.+.- .++..+...+ ..+..++|+|...-+...-....+.|++||+
T Consensus 224 ~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi 274 (783)
T KOG1008|consen 224 TYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDI 274 (783)
T ss_pred chhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEecc
Confidence 4332 2222222222 3488999999754333211344688999998
No 379
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.62 E-value=0.026 Score=46.18 Aligned_cols=186 Identities=10% Similarity=0.114 Sum_probs=115.3
Q ss_pred ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecC-CccEeEEEECCCCCEEEEEecCCCeEEEEEcCCC
Q 014755 45 SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEG-LAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNT 123 (419)
Q Consensus 45 ~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~ 123 (419)
+-...+.++.|+|+.+.|++.... ..-.|+=..+|+.++++.-. -.....+.+..++++.++--.+. .+.++.+...
T Consensus 83 g~~~nvS~LTynp~~rtLFav~n~-p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~-~l~~~~vd~~ 160 (316)
T COG3204 83 GETANVSSLTYNPDTRTLFAVTNK-PAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDR-ALYLFTVDAD 160 (316)
T ss_pred cccccccceeeCCCcceEEEecCC-CceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcc-eEEEEEEcCC
Confidence 344569999999999999988754 56666666678888776432 23345677877777666655555 8888877654
Q ss_pred eEE--------Ee--ccC-CCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCe---EEEEEecc-------ccceee
Q 014755 124 ACV--------HV--QSP-KHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWE---IMGVFAVD-------TLDLAD 182 (419)
Q Consensus 124 ~~~--------~~--~~~-~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~---~~~~~~~~-------~~~v~~ 182 (419)
... .+ ... ...-..++|.|....|.++-+. .-+.||...... .......+ -..+.+
T Consensus 161 t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr---~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSg 237 (316)
T COG3204 161 TTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKER---NPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSG 237 (316)
T ss_pred ccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEcc---CCcEEEEEecCCcccccccccCcccccceEeecccc
Confidence 211 11 111 3344899999999888888764 456666554322 11111111 234677
Q ss_pred eeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCC-------CceeEEEEccCCCe
Q 014755 183 IEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESG-------LGVKSISWSPCGQF 236 (419)
Q Consensus 183 ~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-------~~v~~~~~s~~~~~ 236 (419)
+.|.+....+++. +..++.+.-.|..|..+..+...... .....++..++|..
T Consensus 238 l~~~~~~~~LLVL-S~ESr~l~Evd~~G~~~~~lsL~~g~~gL~~dipqaEGiamDd~g~l 297 (316)
T COG3204 238 LEFNAITNSLLVL-SDESRRLLEVDLSGEVIELLSLTKGNHGLSSDIPQAEGIAMDDDGNL 297 (316)
T ss_pred ceecCCCCcEEEE-ecCCceEEEEecCCCeeeeEEeccCCCCCcccCCCcceeEECCCCCE
Confidence 8888765555443 34567788888888776665543321 23456677666643
No 380
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.61 E-value=0.00017 Score=39.48 Aligned_cols=31 Identities=13% Similarity=0.440 Sum_probs=28.8
Q ss_pred ccCCCeeEEEeCCCCCeEEEEeCCCcEEEee
Q 014755 374 VQKDPIRAATWDPTCTRLVLCTGSSHLYMWT 404 (419)
Q Consensus 374 ~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~ 404 (419)
.|...|+++.|++++.++++++.|+.+++|+
T Consensus 10 ~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 10 GHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred ecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 4888999999999999999999999999996
No 381
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=97.60 E-value=0.017 Score=54.00 Aligned_cols=230 Identities=12% Similarity=0.082 Sum_probs=122.8
Q ss_pred CCCCEEEEEe-C------CeEEEEecCCCcEEEEee--cCcceeEEEEecCCCeEEEEeccC-----CeEEEEEccCCcc
Q 014755 17 PNARYIAVAV-D------YRLVVRDAHSFKVVQLFS--CLDKISYIEWALDSEYILCGLYKR-----LMIQAWSLTQPEW 82 (419)
Q Consensus 17 ~d~~~la~~~-~------~~i~i~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~~~-----g~i~iw~~~~~~~ 82 (419)
..+.++++|+ . ..+..+|..+++...... ....-.+++.. ++...++|+.+. .++..||..++++
T Consensus 283 ~~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W 361 (571)
T KOG4441|consen 283 VSGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQW 361 (571)
T ss_pred CCCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEE-CCEEEEEccccCCCcccceEEEecCCCCce
Confidence 3456666765 3 347889998886665433 33334445554 456667777662 3678899888876
Q ss_pred eeeeecCCccEeEEEE-CCCCCEEEEEecCC----CeEEEEEcCCCeEEEeccCCCCeeeEE-EccCCCEEEEEeecCCC
Q 014755 83 TCKIDEGLAGIAYARW-SPDSRHILTTSDFQ----LRLTVWSLLNTACVHVQSPKHASKGVA-FTQDGKFAAICTRRDCK 156 (419)
Q Consensus 83 ~~~~~~~~~~v~~~~~-~~~~~~l~~~~~~~----~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~ 156 (419)
.. +..-..+-..... .-+|...++||.++ ..+..||..+.+..............+ ..-+|...++|+.+...
T Consensus 362 ~~-~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~~~~g~iYi~GG~~~~~ 440 (571)
T KOG4441|consen 362 TP-VAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVAVLGGKLYIIGGGDGSS 440 (571)
T ss_pred ec-cCCccCccccceeEEECCEEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEEEECCEEEEEcCcCCCc
Confidence 54 2222211111111 22677777777653 257888888877665333333332222 23456777777766443
Q ss_pred ---CeEEEEeccCCeEE--EEEeccccceeeeeECCCCCeEEEEcCCCC-----ceEEEEcCCCceEEEEeecCCCCcee
Q 014755 157 ---DYINLLSCHTWEIM--GVFAVDTLDLADIEWSPDDSAIVIWDSPLE-----YKVLIYSPDGRCLLKYQAYESGLGVK 226 (419)
Q Consensus 157 ---g~v~i~d~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~~~v~ 226 (419)
..+..||..+.+.. ..+........ ++. -++...++ ++.+ .++..||+.......+..... ...
T Consensus 441 ~~l~sve~YDP~t~~W~~~~~M~~~R~~~g-~a~-~~~~iYvv--GG~~~~~~~~~VE~ydp~~~~W~~v~~m~~--~rs 514 (571)
T KOG4441|consen 441 NCLNSVECYDPETNTWTLIAPMNTRRSGFG-VAV-LNGKIYVV--GGFDGTSALSSVERYDPETNQWTMVAPMTS--PRS 514 (571)
T ss_pred cccceEEEEcCCCCceeecCCcccccccce-EEE-ECCEEEEE--CCccCCCccceEEEEcCCCCceeEcccCcc--ccc
Confidence 57889998875433 22222222222 221 24545555 3333 347889984433333322222 111
Q ss_pred EEEE-ccCCCeEEEEEecC-----cEEEEEcCCc
Q 014755 227 SISW-SPCGQFLAVGSYDQ-----TLRVLNHLTW 254 (419)
Q Consensus 227 ~~~~-s~~~~~l~~~~~d~-----~i~v~d~~~~ 254 (419)
.+.. .-+++..+.|+.|+ +|..||..+.
T Consensus 515 ~~g~~~~~~~ly~vGG~~~~~~l~~ve~ydp~~d 548 (571)
T KOG4441|consen 515 AVGVVVLGGKLYAVGGFDGNNNLNTVECYDPETD 548 (571)
T ss_pred cccEEEECCEEEEEecccCccccceeEEcCCCCC
Confidence 1111 12566777887775 4666766553
No 382
>KOG4640 consensus Anaphase-promoting complex (APC), subunit 4 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=97.57 E-value=0.00055 Score=61.09 Aligned_cols=92 Identities=13% Similarity=0.075 Sum_probs=74.2
Q ss_pred CcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEe-EEEECCCCCEEEEEecCCCeEEEEEcCCCeE
Q 014755 47 LDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIA-YARWSPDSRHILTTSDFQLRLTVWSLLNTAC 125 (419)
Q Consensus 47 ~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~ 125 (419)
...+.-+.|+|.-..+|.+..+ |.|.+..++ -+.+..+.-+..+++ +++|.|||+.|+++-.|| +|++.|++++..
T Consensus 20 ~~~i~~~ewnP~~dLiA~~t~~-gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG-~I~L~Dve~~~~ 96 (665)
T KOG4640|consen 20 PINIKRIEWNPKMDLIATRTEK-GELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDG-TIRLHDVEKGGR 96 (665)
T ss_pred ccceEEEEEcCccchhheeccC-CcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCC-eEEEEEccCCCc
Confidence 4568889999999999999866 899999887 555666765666666 999999999999999886 999999999877
Q ss_pred EE--eccCCCCeeeEEEc
Q 014755 126 VH--VQSPKHASKGVAFT 141 (419)
Q Consensus 126 ~~--~~~~~~~~~~~~~~ 141 (419)
+. .......+.+.-|+
T Consensus 97 l~~~~~s~e~~is~~~w~ 114 (665)
T KOG4640|consen 97 LVSFLFSVETDISKGIWD 114 (665)
T ss_pred eeccccccccchheeecc
Confidence 76 24455566777776
No 383
>PHA02713 hypothetical protein; Provisional
Probab=97.57 E-value=0.015 Score=54.46 Aligned_cols=220 Identities=10% Similarity=0.054 Sum_probs=108.3
Q ss_pred eEEEEecCCCcEEEEeecCcce--eEEEEecCCCeEEEEeccC-----CeEEEEEccCCcceeeeecCCcc-EeEEEECC
Q 014755 29 RLVVRDAHSFKVVQLFSCLDKI--SYIEWALDSEYILCGLYKR-----LMIQAWSLTQPEWTCKIDEGLAG-IAYARWSP 100 (419)
Q Consensus 29 ~i~i~~~~~~~~~~~~~~~~~v--~~~~~s~~~~~l~~~~~~~-----g~i~iw~~~~~~~~~~~~~~~~~-v~~~~~~~ 100 (419)
.+..||..+.+......-..+. .+++. -++...++|+.+. ..+..||+.+..+. .+..-..+ -......-
T Consensus 273 ~v~~yd~~~~~W~~l~~mp~~r~~~~~a~-l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~-~~~~m~~~R~~~~~~~~ 350 (557)
T PHA02713 273 CILVYNINTMEYSVISTIPNHIINYASAI-VDNEIIIAGGYNFNNPSLNKVYKINIENKIHV-ELPPMIKNRCRFSLAVI 350 (557)
T ss_pred CEEEEeCCCCeEEECCCCCccccceEEEE-ECCEEEEEcCCCCCCCccceEEEEECCCCeEe-eCCCCcchhhceeEEEE
Confidence 4678888887655432211111 22222 3566667776431 25788898877653 22211111 11111223
Q ss_pred CCCEEEEEecCC----CeEEEEEcCCCeEEEeccCCCCee-eEEEccCCCEEEEEeecCC--------------------
Q 014755 101 DSRHILTTSDFQ----LRLTVWSLLNTACVHVQSPKHASK-GVAFTQDGKFAAICTRRDC-------------------- 155 (419)
Q Consensus 101 ~~~~l~~~~~~~----~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~-------------------- 155 (419)
+|+..+.||.++ ..+..||..+.+...+.....+.. ..+..-+++..++|+.+..
T Consensus 351 ~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~ 430 (557)
T PHA02713 351 DDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCVLDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHS 430 (557)
T ss_pred CCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEEECCEEEEEeCCCcccccccccccccccccccccc
Confidence 666667776542 258899999887766433322221 1112235666676765321
Q ss_pred CCeEEEEeccCCeE--EEEEeccccceeeeeECCCCCeEEEEcCCCC-----ceEEEEcCCC-ceEEEEeecC-CCCcee
Q 014755 156 KDYINLLSCHTWEI--MGVFAVDTLDLADIEWSPDDSAIVIWDSPLE-----YKVLIYSPDG-RCLLKYQAYE-SGLGVK 226 (419)
Q Consensus 156 ~g~v~i~d~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~-----~~i~~~d~~~-~~~~~~~~~~-~~~~v~ 226 (419)
...+..||..+.+- +..+.........+. -+++..++ .+..+ ..+..||+.. ..-....... ......
T Consensus 431 ~~~ve~YDP~td~W~~v~~m~~~r~~~~~~~--~~~~IYv~-GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~ 507 (557)
T PHA02713 431 SNKVIRYDTVNNIWETLPNFWTGTIRPGVVS--HKDDIYVV-CDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALH 507 (557)
T ss_pred cceEEEECCCCCeEeecCCCCcccccCcEEE--ECCEEEEE-eCCCCCCccceeEEEecCCCCCCeeEccccCcccccce
Confidence 13578888876443 222221111111122 23444444 22211 3467899843 2222222111 111222
Q ss_pred EEEEccCCCeEEEEEecC--cEEEEEcCCce
Q 014755 227 SISWSPCGQFLAVGSYDQ--TLRVLNHLTWK 255 (419)
Q Consensus 227 ~~~~s~~~~~l~~~~~d~--~i~v~d~~~~~ 255 (419)
.+++ +|+..++|+.++ .+..||..+.+
T Consensus 508 ~~~~--~~~iyv~Gg~~~~~~~e~yd~~~~~ 536 (557)
T PHA02713 508 TILH--DNTIMMLHCYESYMLQDTFNVYTYE 536 (557)
T ss_pred eEEE--CCEEEEEeeecceeehhhcCccccc
Confidence 2222 778888999887 67777766543
No 384
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=97.57 E-value=0.046 Score=47.76 Aligned_cols=243 Identities=13% Similarity=0.073 Sum_probs=108.8
Q ss_pred CCCEEEEEecCCCeEEEEEcCC----CeEEE-ecc---C-C---CCeeeEEEccCCCEEEEEeec---CCCCeEEEEecc
Q 014755 101 DSRHILTTSDFQLRLTVWSLLN----TACVH-VQS---P-K---HASKGVAFTQDGKFAAICTRR---DCKDYINLLSCH 165 (419)
Q Consensus 101 ~~~~l~~~~~~~~~i~iwd~~~----~~~~~-~~~---~-~---~~~~~~~~~~~~~~l~~~~~~---~~~g~v~i~d~~ 165 (419)
+.++|+..+-..+.|++.|+.+ .+..+ +.. . + .....+..-|+|+.++++-.+ ++.|.+.++|-+
T Consensus 86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~ 165 (461)
T PF05694_consen 86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGE 165 (461)
T ss_dssp -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TT
T ss_pred cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCc
Confidence 5678888886666999999984 23333 211 1 1 112445556889888776543 344688999999
Q ss_pred CCeEEEEEeccc---cceeeeeECCCCCeEEEEcCC------------------CCceEEEEcC-CCceEEEEeecCCCC
Q 014755 166 TWEIMGVFAVDT---LDLADIEWSPDDSAIVIWDSP------------------LEYKVLIYSP-DGRCLLKYQAYESGL 223 (419)
Q Consensus 166 ~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~~------------------~~~~i~~~d~-~~~~~~~~~~~~~~~ 223 (419)
+.+......... ..-+.+-|.|..+.+++.+-. ...++.+||. +.+.++++.......
T Consensus 166 tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~ 245 (461)
T PF05694_consen 166 TFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQ 245 (461)
T ss_dssp T--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEE
T ss_pred cccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCC
Confidence 888877766533 234567778877777752111 2468999999 778888887655433
Q ss_pred ceeEEEEcc--CCCeEEEEE-ecCcEEEEEc-CCce--eeeeec-ccccccCCCccceeccCCCcccccceeeeccCccc
Q 014755 224 GVKSISWSP--CGQFLAVGS-YDQTLRVLNH-LTWK--TFAEFM-HLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFI 296 (419)
Q Consensus 224 ~v~~~~~s~--~~~~l~~~~-~d~~i~v~d~-~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (419)
.+..+.|.. +..+-++++ -..+|..|-- ..++ ..+.+. ....+..
T Consensus 246 ~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~---------------------------- 297 (461)
T PF05694_consen 246 MPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEG---------------------------- 297 (461)
T ss_dssp EEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--S----------------------------
T ss_pred ceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCc----------------------------
Confidence 466677754 444433332 3344544432 3322 111111 0000000
Q ss_pred cccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec---
Q 014755 297 QGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL--- 373 (419)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~--- 373 (419)
..++. .+..+..-..-|+++.+|.|.++|..... +.|.|+.||+.....-.+.
T Consensus 298 ---------------------~~lp~--ml~~~~~~P~LitDI~iSlDDrfLYvs~W-~~GdvrqYDISDP~~Pkl~gqv 353 (461)
T PF05694_consen 298 ---------------------WILPE--MLKPFGAVPPLITDILISLDDRFLYVSNW-LHGDVRQYDISDPFNPKLVGQV 353 (461)
T ss_dssp ---------------------S---G--GGGGG-EE------EEE-TTS-EEEEEET-TTTEEEEEE-SSTTS-EEEEEE
T ss_pred ---------------------ccccc--cccccccCCCceEeEEEccCCCEEEEEcc-cCCcEEEEecCCCCCCcEEeEE
Confidence 00000 00000011234789999999999988877 4599999999874322221
Q ss_pred --c---------------cCCCeeEEEeCCCCCeEEEEe
Q 014755 374 --V---------------QKDPIRAATWDPTCTRLVLCT 395 (419)
Q Consensus 374 --~---------------~~~~v~~~~~s~~~~~l~s~~ 395 (419)
+ -.+...-+..|-||+.|...+
T Consensus 354 ~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYvTn 392 (461)
T PF05694_consen 354 FLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYVTN 392 (461)
T ss_dssp E-BTTTT-B--TTS------S----EEE-TTSSEEEEE-
T ss_pred EECcEeccCCCccccccccCCCCCeEEEccCCeEEEEEe
Confidence 1 012235577888999776543
No 385
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=97.42 E-value=0.08 Score=46.85 Aligned_cols=81 Identities=16% Similarity=0.107 Sum_probs=53.5
Q ss_pred cceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEE-EccC----------------CC-eEE
Q 014755 178 LDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSIS-WSPC----------------GQ-FLA 238 (419)
Q Consensus 178 ~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~-~s~~----------------~~-~l~ 238 (419)
..+.++..+|++++.++.| .-|.|.++|+ .+..++.+++..+. .+.=+. ..+. .. +++
T Consensus 308 R~~~~i~~sP~~~laA~tD--slGRV~LiD~~~~~vvrmWKGYRdA-qc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvI 384 (415)
T PF14655_consen 308 REGESICLSPSGRLAAVTD--SLGRVLLIDVARGIVVRMWKGYRDA-QCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVI 384 (415)
T ss_pred ceEEEEEECCCCCEEEEEc--CCCcEEEEECCCChhhhhhccCccc-eEEEEEeecccccccccccccCCCCcceEEEEE
Confidence 4478899999999888843 4699999999 77777766654431 010000 0010 11 233
Q ss_pred EEEecCcEEEEEcCCceeeeeec
Q 014755 239 VGSYDQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 239 ~~~~d~~i~v~d~~~~~~~~~~~ 261 (419)
.+-.-|.|.||.++.|..+..+.
T Consensus 385 yaprRg~lEvW~~~~g~Rv~a~~ 407 (415)
T PF14655_consen 385 YAPRRGILEVWSMRQGPRVAAFN 407 (415)
T ss_pred EeccCCeEEEEecCCCCEEEEEE
Confidence 45567899999999998887775
No 386
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.41 E-value=0.00057 Score=37.23 Aligned_cols=38 Identities=29% Similarity=0.466 Sum_probs=30.9
Q ss_pred ceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEE
Q 014755 211 RCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLN 250 (419)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d 250 (419)
+....+..+.. .+.++.|++++.++++++.|+.+++|+
T Consensus 3 ~~~~~~~~~~~--~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKGHTG--PVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEecCC--ceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 34455555544 799999999999999999999999996
No 387
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=97.33 E-value=0.1 Score=48.94 Aligned_cols=237 Identities=8% Similarity=0.011 Sum_probs=123.8
Q ss_pred CCCEEEEEecCC-----CeEEEEEcCCCeEEEeccCCC--CeeeEEEccCCCEEEEEeecC---CCCeEEEEeccCCeEE
Q 014755 101 DSRHILTTSDFQ-----LRLTVWSLLNTACVHVQSPKH--ASKGVAFTQDGKFAAICTRRD---CKDYINLLSCHTWEIM 170 (419)
Q Consensus 101 ~~~~l~~~~~~~-----~~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~---~~g~v~i~d~~~~~~~ 170 (419)
.+..+++||..+ ..+..+|..+++......... ...+++.. ++...++|+.+. .-..+..||.++.+-.
T Consensus 284 ~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~ 362 (571)
T KOG4441|consen 284 SGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQWT 362 (571)
T ss_pred CCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEE-CCEEEEEccccCCCcccceEEEecCCCCcee
Confidence 455556666542 378899999987766332222 22344443 456677777762 2247889998876543
Q ss_pred EE--EeccccceeeeeECCCCCeEEEEcCCCC-----ceEEEEcCCCceEEEEeecCCCCceeEEE-EccCCCeEEEEEe
Q 014755 171 GV--FAVDTLDLADIEWSPDDSAIVIWDSPLE-----YKVLIYSPDGRCLLKYQAYESGLGVKSIS-WSPCGQFLAVGSY 242 (419)
Q Consensus 171 ~~--~~~~~~~v~~~~~~~~~~~l~~~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~~~v~~~~-~s~~~~~l~~~~~ 242 (419)
.. +........... -+|...++ ++.+ .++..||+....-........ ...+.+ ..-+|+..+.|+.
T Consensus 363 ~~a~M~~~R~~~~v~~--l~g~iYav--GG~dg~~~l~svE~YDp~~~~W~~va~m~~--~r~~~gv~~~~g~iYi~GG~ 436 (571)
T KOG4441|consen 363 PVAPMNTKRSDFGVAV--LDGKLYAV--GGFDGEKSLNSVECYDPVTNKWTPVAPMLT--RRSGHGVAVLGGKLYIIGGG 436 (571)
T ss_pred ccCCccCccccceeEE--ECCEEEEE--eccccccccccEEEecCCCCcccccCCCCc--ceeeeEEEEECCEEEEEcCc
Confidence 32 211111111111 24555555 4444 357888884433322221111 111221 2226777788876
Q ss_pred cC------cEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccC
Q 014755 243 DQ------TLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEI 316 (419)
Q Consensus 243 d~------~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (419)
++ ++..||..+.+-...-.
T Consensus 437 ~~~~~~l~sve~YDP~t~~W~~~~~------------------------------------------------------- 461 (571)
T KOG4441|consen 437 DGSSNCLNSVECYDPETNTWTLIAP------------------------------------------------------- 461 (571)
T ss_pred CCCccccceEEEEcCCCCceeecCC-------------------------------------------------------
Confidence 64 34555544322111000
Q ss_pred CCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCC---CceEEEeeccCCCceeecc---cCCCeeEEEeCCCCCe
Q 014755 317 PISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSM---PTTLWIWDICRQEPAAILV---QKDPIRAATWDPTCTR 390 (419)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~---~~~i~iwd~~~~~~~~~~~---~~~~v~~~~~s~~~~~ 390 (419)
......... .-.-++.+.+.|+.|. -.+|..||..+.+....-. ....+..+.+ +++.
T Consensus 462 ------------M~~~R~~~g--~a~~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g~~~~--~~~l 525 (571)
T KOG4441|consen 462 ------------MNTRRSGFG--VAVLNGKIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTSPRSAVGVVVL--GGKL 525 (571)
T ss_pred ------------cccccccce--EEEECCEEEEECCccCCCccceEEEEcCCCCceeEcccCccccccccEEEE--CCEE
Confidence 000000111 2234678888888661 1247889988877665532 2233333343 5667
Q ss_pred EEEEeCCC-----cEEEeecCCCeEEecCC
Q 014755 391 LVLCTGSS-----HLYMWTPSGAYCVSNPL 415 (419)
Q Consensus 391 l~s~~~dg-----~i~vw~~~~~~~~~~~~ 415 (419)
.+.|+.|| +|..||..+.+....+.
T Consensus 526 y~vGG~~~~~~l~~ve~ydp~~d~W~~~~~ 555 (571)
T KOG4441|consen 526 YAVGGFDGNNNLNTVECYDPETDTWTEVTE 555 (571)
T ss_pred EEEecccCccccceeEEcCCCCCceeeCCC
Confidence 77788776 58889999888776654
No 388
>PHA02713 hypothetical protein; Provisional
Probab=97.30 E-value=0.041 Score=51.51 Aligned_cols=96 Identities=11% Similarity=0.022 Sum_probs=51.2
Q ss_pred eEEEEEccCCcceeeeecCCccE--eEEEECCCCCEEEEEecC-C----CeEEEEEcCCCeEEEeccCCCCe-eeEEEcc
Q 014755 71 MIQAWSLTQPEWTCKIDEGLAGI--AYARWSPDSRHILTTSDF-Q----LRLTVWSLLNTACVHVQSPKHAS-KGVAFTQ 142 (419)
Q Consensus 71 ~i~iw~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~~-~----~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~ 142 (419)
.+..||..++++... .....+. .+++ .-++...+.||.+ + ..+..||..++....+.....+. ......-
T Consensus 273 ~v~~yd~~~~~W~~l-~~mp~~r~~~~~a-~l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~~~~~~ 350 (557)
T PHA02713 273 CILVYNINTMEYSVI-STIPNHIINYASA-IVDNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRFSLAVI 350 (557)
T ss_pred CEEEEeCCCCeEEEC-CCCCccccceEEE-EECCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhceeEEEE
Confidence 467888887765422 1111111 1222 2356666666643 1 25788999888765533322222 2222234
Q ss_pred CCCEEEEEeecCC--CCeEEEEeccCCe
Q 014755 143 DGKFAAICTRRDC--KDYINLLSCHTWE 168 (419)
Q Consensus 143 ~~~~l~~~~~~~~--~g~v~i~d~~~~~ 168 (419)
+++..+.|+.++. ...+..||..+.+
T Consensus 351 ~g~IYviGG~~~~~~~~sve~Ydp~~~~ 378 (557)
T PHA02713 351 DDTIYAIGGQNGTNVERTIECYTMGDDK 378 (557)
T ss_pred CCEEEEECCcCCCCCCceEEEEECCCCe
Confidence 5667777775421 1358899987643
No 389
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=97.29 E-value=0.07 Score=43.60 Aligned_cols=193 Identities=11% Similarity=0.016 Sum_probs=110.7
Q ss_pred cEEEEeecCc--ceeEEEEecCCCeEEEEecc-CCeEEEEEccCCcceeeeecCCc-cEeEEEECCCCCEEEEEecCCCe
Q 014755 39 KVVQLFSCLD--KISYIEWALDSEYILCGLYK-RLMIQAWSLTQPEWTCKIDEGLA-GIAYARWSPDSRHILTTSDFQLR 114 (419)
Q Consensus 39 ~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~~-~g~i~iw~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~~~~~ 114 (419)
+++..+.|.. -...+.|..+|.++-+.+.. +..|+.+|+.+++......-... --..++.. +..|..-.-..+.
T Consensus 34 ~vv~~ypHd~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~--~d~l~qLTWk~~~ 111 (264)
T PF05096_consen 34 EVVETYPHDPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITIL--GDKLYQLTWKEGT 111 (264)
T ss_dssp EEEEEEE--TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEE--TTEEEEEESSSSE
T ss_pred EEEEECCCCCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEE--CCEEEEEEecCCe
Confidence 4566777754 35678887778776666543 23899999999987655432221 11233333 3345555544459
Q ss_pred EEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccc-----cceeeeeECCCC
Q 014755 115 LTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDT-----LDLADIEWSPDD 189 (419)
Q Consensus 115 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~-----~~v~~~~~~~~~ 189 (419)
..+||..+-+.+........-..++ .|++.|+..... ..++++|..+.+..+.+.... ..++.+.|- +|
T Consensus 112 ~f~yd~~tl~~~~~~~y~~EGWGLt--~dg~~Li~SDGS---~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G 185 (264)
T PF05096_consen 112 GFVYDPNTLKKIGTFPYPGEGWGLT--SDGKRLIMSDGS---SRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NG 185 (264)
T ss_dssp EEEEETTTTEEEEEEE-SSS--EEE--ECSSCEEEE-SS---SEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TT
T ss_pred EEEEccccceEEEEEecCCcceEEE--cCCCEEEEECCc---cceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cC
Confidence 9999999877776223334556666 566666655433 589999998877776665432 235556665 45
Q ss_pred CeEEEEcCCCCceEEEEcC-CCceEEEEeecC-------------CCCceeEEEEccCCCeEEEEE
Q 014755 190 SAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYE-------------SGLGVKSISWSPCGQFLAVGS 241 (419)
Q Consensus 190 ~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~-------------~~~~v~~~~~s~~~~~l~~~~ 241 (419)
...+= .-....|...|+ +|+....+.... ...-.+.+|++|..+.+...+
T Consensus 186 ~IyAN--VW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG 249 (264)
T PF05096_consen 186 KIYAN--VWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG 249 (264)
T ss_dssp EEEEE--ETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred EEEEE--eCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence 43332 233567777788 787777663210 123578999999776655544
No 390
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=97.28 E-value=0.059 Score=47.71 Aligned_cols=179 Identities=12% Similarity=0.111 Sum_probs=96.5
Q ss_pred ccccCeEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEee---------cCcceeEEEEec-----CC---CeEEEEeccC
Q 014755 8 KQTGPSCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFS---------CLDKISYIEWAL-----DS---EYILCGLYKR 69 (419)
Q Consensus 8 ~~~~~~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~---------~~~~v~~~~~s~-----~~---~~l~~~~~~~ 69 (419)
+....++.| |=-++|.|. +|.+.|.|+++..++.... ....|+++.|+- |+ -.|++|...
T Consensus 87 g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn~- 164 (395)
T PF08596_consen 87 GPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTNS- 164 (395)
T ss_dssp -SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEETT-
T ss_pred CcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEeCC-
Confidence 344446676 555899998 7899999998887776432 134688898874 22 356677654
Q ss_pred CeEEEEEccC---Ccceee----eecCCccEeEEE-ECCC---------------------CCEEEEEecCCCeEEEEEc
Q 014755 70 LMIQAWSLTQ---PEWTCK----IDEGLAGIAYAR-WSPD---------------------SRHILTTSDFQLRLTVWSL 120 (419)
Q Consensus 70 g~i~iw~~~~---~~~~~~----~~~~~~~v~~~~-~~~~---------------------~~~l~~~~~~~~~i~iwd~ 120 (419)
|.+.+|.+.- +..... ...+.++|..+. ++.+ ..++++++. . .++++..
T Consensus 165 G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe-~-~irv~~~ 242 (395)
T PF08596_consen 165 GNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSE-S-DIRVFKP 242 (395)
T ss_dssp SEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-S-S-EEEEE-T
T ss_pred CCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcc-c-ceEEEeC
Confidence 9999998752 222211 223445555544 3211 124555554 4 7999999
Q ss_pred CCCeEEEeccCCCCe--eeEEEc-----cCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccc----cceeeeeECCCC
Q 014755 121 LNTACVHVQSPKHAS--KGVAFT-----QDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDT----LDLADIEWSPDD 189 (419)
Q Consensus 121 ~~~~~~~~~~~~~~~--~~~~~~-----~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~----~~v~~~~~~~~~ 189 (419)
.+.+...... +... ..+.+- ..+..|++...+ |.+++|.+-.-+.+....... ..+....++++|
T Consensus 243 ~~~k~~~K~~-~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~---G~i~i~SLP~Lkei~~~~l~~~~d~~~~~~ssis~~G 318 (395)
T PF08596_consen 243 PKSKGAHKSF-DDPFLCSSASVVPTISRNGGYCLVCLFNN---GSIRIYSLPSLKEIKSVSLPPPLDSRRLSSSSISRNG 318 (395)
T ss_dssp T---EEEEE--SS-EEEEEEEEEEEE-EEEEEEEEEEETT---SEEEEEETTT--EEEEEE-SS---HHHHTT-EE-TTS
T ss_pred CCCcccceee-ccccccceEEEEeecccCCceEEEEEECC---CcEEEEECCCchHhhcccCCCccccccccccEECCCC
Confidence 8877665222 3322 444452 244556666554 899999999888877766532 345567778888
Q ss_pred CeEEE
Q 014755 190 SAIVI 194 (419)
Q Consensus 190 ~~l~~ 194 (419)
..++.
T Consensus 319 di~~~ 323 (395)
T PF08596_consen 319 DIFYW 323 (395)
T ss_dssp -EEEE
T ss_pred CEEEE
Confidence 86655
No 391
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=97.28 E-value=0.078 Score=43.84 Aligned_cols=208 Identities=10% Similarity=0.073 Sum_probs=121.7
Q ss_pred ceeEEEEecCCCeEEEEeccCCeEEEEEcc------CC-cceeeeec-----CCccEeEEEECCCCCE------------
Q 014755 49 KISYIEWALDSEYILCGLYKRLMIQAWSLT------QP-EWTCKIDE-----GLAGIAYARWSPDSRH------------ 104 (419)
Q Consensus 49 ~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~------~~-~~~~~~~~-----~~~~v~~~~~~~~~~~------------ 104 (419)
.-+.|+++|.+.+-++.... +...+||.. .. .++..+.. .....+.+.|+....+
T Consensus 24 N~WGia~~p~~~~WVadngT-~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~ 102 (336)
T TIGR03118 24 NAWGLSYRPGGPFWVANTGT-GTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSR 102 (336)
T ss_pred ccceeEecCCCCEEEecCCc-ceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCccccee
Confidence 45789999998777766544 799999986 11 22223321 1234677777654333
Q ss_pred EEEEecCCCeEEEEEcCCCeE------EEeccC-CCCe-eeEEEccC--CCEEEEEeecCCCCeEEEEeccCCeEEEEEe
Q 014755 105 ILTTSDFQLRLTVWSLLNTAC------VHVQSP-KHAS-KGVAFTQD--GKFAAICTRRDCKDYINLLSCHTWEIMGVFA 174 (419)
Q Consensus 105 l~~~~~~~~~i~iwd~~~~~~------~~~~~~-~~~~-~~~~~~~~--~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~ 174 (419)
++.+++++ +|.-|...-+.. +.+... ...+ ..+++... +.+|..+... .++|.++|-.-.+.. .-.
T Consensus 103 Fif~tEdG-TisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~--~g~IDVFd~~f~~~~-~~g 178 (336)
T TIGR03118 103 FLFVTEDG-TLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFR--QGRIDVFKGSFRPPP-LPG 178 (336)
T ss_pred EEEEeCCc-eEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccC--CCceEEecCcccccc-CCC
Confidence 45666766 898898543222 222211 2334 55666543 5677776654 478999986532221 100
Q ss_pred ccccceeeeeECC------CCCeEEEE-----------cCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEcc-----
Q 014755 175 VDTLDLADIEWSP------DDSAIVIW-----------DSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSP----- 232 (419)
Q Consensus 175 ~~~~~v~~~~~~~------~~~~l~~~-----------~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~----- 232 (419)
....+-.-..|.| .++.++++ .+...|.|-+||++|+.++++.....-...+.|+..|
T Consensus 179 ~F~DP~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~G~l~~r~as~g~LNaPWG~a~APa~FG~ 258 (336)
T TIGR03118 179 SFIDPALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLNGQLLRRVASSGRLNAPWGLAIAPESFGS 258 (336)
T ss_pred CccCCCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCCCcEEEEeccCCcccCCceeeeChhhhCC
Confidence 0000000001111 12222221 0222378999999999999986554444677888866
Q ss_pred -CCCeEEEEEecCcEEEEEcCCceeeeeec
Q 014755 233 -CGQFLAVGSYDQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 233 -~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 261 (419)
.|.+|+---.||+|..||..+++.+..+.
T Consensus 259 ~sg~lLVGNFGDG~InaFD~~sG~~~g~L~ 288 (336)
T TIGR03118 259 LSGALLVGNFGDGTINAYDPQSGAQLGQLL 288 (336)
T ss_pred CCCCeEEeecCCceeEEecCCCCceeeeec
Confidence 35666666679999999999998877765
No 392
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.27 E-value=0.0012 Score=37.78 Aligned_cols=35 Identities=14% Similarity=0.263 Sum_probs=30.6
Q ss_pred cCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCe
Q 014755 375 QKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAY 409 (419)
Q Consensus 375 ~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~ 409 (419)
....|..++|+|...+||.++.||.|.+|.+...+
T Consensus 10 l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~~qr 44 (47)
T PF12894_consen 10 LPSRVSCMSWCPTMDLIALGTEDGEVLVYRLNWQR 44 (47)
T ss_pred CCCcEEEEEECCCCCEEEEEECCCeEEEEECCCcC
Confidence 45679999999999999999999999999995443
No 393
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=97.27 E-value=0.11 Score=45.46 Aligned_cols=221 Identities=15% Similarity=0.091 Sum_probs=105.3
Q ss_pred CCCEEEEEe--CCeEEEEecCC----CcEEEEeec--------CcceeEEEEecCCCeEEEEecc-----CCeEEEEEcc
Q 014755 18 NARYIAVAV--DYRLVVRDAHS----FKVVQLFSC--------LDKISYIEWALDSEYILCGLYK-----RLMIQAWSLT 78 (419)
Q Consensus 18 d~~~la~~~--~~~i~i~~~~~----~~~~~~~~~--------~~~v~~~~~s~~~~~l~~~~~~-----~g~i~iw~~~ 78 (419)
+.++|+..+ .++|+|.|+.+ -++.+.+.. -..-..+..-|+|+.++++-.+ .|-+.++|-+
T Consensus 86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~ 165 (461)
T PF05694_consen 86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGE 165 (461)
T ss_dssp -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TT
T ss_pred cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCc
Confidence 578888887 67899999874 334444431 1234556666899888876433 3578888877
Q ss_pred CCcceeeeecCCc---cEeEEEECCCCCEEEEEec-------------------CCCeEEEEEcCCCeEEE-eccCCCC-
Q 014755 79 QPEWTCKIDEGLA---GIAYARWSPDSRHILTTSD-------------------FQLRLTVWSLLNTACVH-VQSPKHA- 134 (419)
Q Consensus 79 ~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~-------------------~~~~i~iwd~~~~~~~~-~~~~~~~- 134 (419)
+.+.......... --..+-|.|..+.++++.- .+.++.+||+.+.+.++ +......
T Consensus 166 tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~ 245 (461)
T PF05694_consen 166 TFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQ 245 (461)
T ss_dssp T--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEE
T ss_pred cccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCC
Confidence 7766655543222 2456777887777777531 24489999999999888 4333322
Q ss_pred -eeeEEEc--cCCCEEEEEeecCCCCeEEEEec-cCCe--EEEEEecc-------------------ccceeeeeECCCC
Q 014755 135 -SKGVAFT--QDGKFAAICTRRDCKDYINLLSC-HTWE--IMGVFAVD-------------------TLDLADIEWSPDD 189 (419)
Q Consensus 135 -~~~~~~~--~~~~~l~~~~~~~~~g~v~i~d~-~~~~--~~~~~~~~-------------------~~~v~~~~~~~~~ 189 (419)
...+.|. |+..+-++++.- ..+|..|-- +.++ ..+.+... ..-++.+..|.|.
T Consensus 246 ~pLEvRflH~P~~~~gFvg~aL--ss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDD 323 (461)
T PF05694_consen 246 MPLEVRFLHDPDANYGFVGCAL--SSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDD 323 (461)
T ss_dssp EEEEEEE-SSTT--EEEEEEE----EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS
T ss_pred ceEEEEecCCCCccceEEEEec--cceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCC
Confidence 3566664 445554444432 135555543 3332 22222111 2347889999999
Q ss_pred CeEEEEcCCCCceEEEEcC-C-Cc--eEEEEeecC--------------CCCceeEEEEccCCCeEEEEE
Q 014755 190 SAIVIWDSPLEYKVLIYSP-D-GR--CLLKYQAYE--------------SGLGVKSISWSPCGQFLAVGS 241 (419)
Q Consensus 190 ~~l~~~~~~~~~~i~~~d~-~-~~--~~~~~~~~~--------------~~~~v~~~~~s~~~~~l~~~~ 241 (419)
++|.+.. -..|.++.||+ + .+ +..++.... -.+...-+..|-||+.|+..+
T Consensus 324 rfLYvs~-W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYvTn 392 (461)
T PF05694_consen 324 RFLYVSN-WLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYVTN 392 (461)
T ss_dssp -EEEEEE-TTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEEE-
T ss_pred CEEEEEc-ccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEEEe
Confidence 9998853 45899999999 2 22 222221110 001235577888888776654
No 394
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=97.22 E-value=0.092 Score=43.59 Aligned_cols=113 Identities=16% Similarity=0.059 Sum_probs=67.7
Q ss_pred CeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEE-c-CCCc
Q 014755 134 ASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIY-S-PDGR 211 (419)
Q Consensus 134 ~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~-d-~~~~ 211 (419)
.+.+.+++++++.+++....+....++++.... ...... ....+....|++++....+-+ .+...+++ + .++.
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~--~~~~~~-~g~~l~~PS~d~~g~~W~v~~--~~~~~~~~~~~~~g~ 99 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGG--PVRPVL-TGGSLTRPSWDPDGWVWTVDD--GSGGVRVVRDSASGT 99 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCC--cceeec-cCCccccccccCCCCEEEEEc--CCCceEEEEecCCCc
Confidence 578999999999888877332234666665443 222221 223788889999987776633 23333443 3 3333
Q ss_pred eEE-EEeecCCCCceeEEEEccCCCeEEEEEe---cCcEEEEEc
Q 014755 212 CLL-KYQAYESGLGVKSISWSPCGQFLAVGSY---DQTLRVLNH 251 (419)
Q Consensus 212 ~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~~---d~~i~v~d~ 251 (419)
... ..........|..+.+||||..++.... ++.|.+--+
T Consensus 100 ~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V 143 (253)
T PF10647_consen 100 GEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGV 143 (253)
T ss_pred ceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEE
Confidence 222 2222111116999999999998887663 456666543
No 395
>KOG2395 consensus Protein involved in vacuole import and degradation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.18 E-value=0.0099 Score=52.41 Aligned_cols=142 Identities=15% Similarity=0.158 Sum_probs=97.4
Q ss_pred CCCCEEEEEe--CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCe-------EEEEeccCCeEEEEEccCCcc--eee
Q 014755 17 PNARYIAVAV--DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEY-------ILCGLYKRLMIQAWSLTQPEW--TCK 85 (419)
Q Consensus 17 ~d~~~la~~~--~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-------l~~~~~~~g~i~iw~~~~~~~--~~~ 85 (419)
.+.++|.... ...++-.|++.|+++........|.-+.+.|+.+. -+.|-.+ ..|.-||++-... +..
T Consensus 343 ~dsnlil~~~~~~~~l~klDIE~GKIVeEWk~~~di~mv~~t~d~K~~Ql~~e~TlvGLs~-n~vfriDpRv~~~~kl~~ 421 (644)
T KOG2395|consen 343 ADSNLILMDGGEQDKLYKLDIERGKIVEEWKFEDDINMVDITPDFKFAQLTSEQTLVGLSD-NSVFRIDPRVQGKNKLAV 421 (644)
T ss_pred cccceEeeCCCCcCcceeeecccceeeeEeeccCCcceeeccCCcchhcccccccEEeecC-CceEEecccccCcceeee
Confidence 3445555543 45688899999999998886666888889886542 2233334 6899999873321 111
Q ss_pred eecC----CccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEE
Q 014755 86 IDEG----LAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYIN 160 (419)
Q Consensus 86 ~~~~----~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~ 160 (419)
...| .....|.+-..+| ++++++.++ .|++||--...... +++.+.+|..+..+.+|++|+..+.. .+.
T Consensus 422 ~q~kqy~~k~nFsc~aTT~sG-~IvvgS~~G-dIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~t----yLl 495 (644)
T KOG2395|consen 422 VQSKQYSTKNNFSCFATTESG-YIVVGSLKG-DIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATCKT----YLL 495 (644)
T ss_pred eeccccccccccceeeecCCc-eEEEeecCC-cEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEeccc----EEE
Confidence 2222 2335566666555 688888877 99999984333333 88889999999999999999988763 777
Q ss_pred EEecc
Q 014755 161 LLSCH 165 (419)
Q Consensus 161 i~d~~ 165 (419)
+.++.
T Consensus 496 Li~t~ 500 (644)
T KOG2395|consen 496 LIDTL 500 (644)
T ss_pred EEEEe
Confidence 77654
No 396
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=97.08 E-value=0.11 Score=42.09 Aligned_cols=246 Identities=12% Similarity=0.018 Sum_probs=150.8
Q ss_pred EeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEe-ccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEE
Q 014755 93 IAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHV-QSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMG 171 (419)
Q Consensus 93 v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~ 171 (419)
...++-.|||..-+++...+ .|--.|..+|+.... .+.......+..-|||..-++-+. ..|.-+|.++.+..+
T Consensus 64 p~dvapapdG~VWft~qg~g-aiGhLdP~tGev~~ypLg~Ga~Phgiv~gpdg~~Witd~~----~aI~R~dpkt~evt~ 138 (353)
T COG4257 64 PFDVAPAPDGAVWFTAQGTG-AIGHLDPATGEVETYPLGSGASPHGIVVGPDGSAWITDTG----LAIGRLDPKTLEVTR 138 (353)
T ss_pred ccccccCCCCceEEecCccc-cceecCCCCCceEEEecCCCCCCceEEECCCCCeeEecCc----ceeEEecCcccceEE
Confidence 45677788998777776655 788889999998884 344455588889999876665432 256667766654432
Q ss_pred E---EeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEE
Q 014755 172 V---FAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRV 248 (419)
Q Consensus 172 ~---~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v 248 (419)
- .+..........|.+.|.+-++.. .|.---.|.....+..+..... ...+.|+..|+|..-++.-.++.|-.
T Consensus 139 f~lp~~~a~~nlet~vfD~~G~lWFt~q---~G~yGrLdPa~~~i~vfpaPqG-~gpyGi~atpdGsvwyaslagnaiar 214 (353)
T COG4257 139 FPLPLEHADANLETAVFDPWGNLWFTGQ---IGAYGRLDPARNVISVFPAPQG-GGPYGICATPDGSVWYASLAGNAIAR 214 (353)
T ss_pred eecccccCCCcccceeeCCCccEEEeec---cccceecCcccCceeeeccCCC-CCCcceEECCCCcEEEEeccccceEE
Confidence 2 122345678889999998887733 2222233444455555555432 36788999999987777666667777
Q ss_pred EEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCC
Q 014755 249 LNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTD 328 (419)
Q Consensus 249 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (419)
.|..++.. ..+..+..
T Consensus 215 idp~~~~a-ev~p~P~~--------------------------------------------------------------- 230 (353)
T COG4257 215 IDPFAGHA-EVVPQPNA--------------------------------------------------------------- 230 (353)
T ss_pred cccccCCc-ceecCCCc---------------------------------------------------------------
Confidence 67655421 11111110
Q ss_pred CCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceee--cccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 329 KPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAI--LVQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 329 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
....-..+--+|.|+.-++.... +.++.||-....-... -+....-.++.....++.-.+--.-|.|.-+|.+
T Consensus 231 ---~~~gsRriwsdpig~~wittwg~--g~l~rfdPs~~sW~eypLPgs~arpys~rVD~~grVW~sea~agai~rfdpe 305 (353)
T COG4257 231 ---LKAGSRRIWSDPIGRAWITTWGT--GSLHRFDPSVTSWIEYPLPGSKARPYSMRVDRHGRVWLSEADAGAIGRFDPE 305 (353)
T ss_pred ---ccccccccccCccCcEEEeccCC--ceeeEeCcccccceeeeCCCCCCCcceeeeccCCcEEeeccccCceeecCcc
Confidence 01112334456777777776655 7888887666543322 2344455666666666655555556777778887
Q ss_pred CCeEEecCCC
Q 014755 407 GAYCVSNPLP 416 (419)
Q Consensus 407 ~~~~~~~~~~ 416 (419)
+.+...+|.+
T Consensus 306 ta~ftv~p~p 315 (353)
T COG4257 306 TARFTVLPIP 315 (353)
T ss_pred cceEEEecCC
Confidence 7666665554
No 397
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=97.05 E-value=0.053 Score=37.55 Aligned_cols=88 Identities=11% Similarity=0.116 Sum_probs=57.2
Q ss_pred CEEEEEe-CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEE
Q 014755 20 RYIAVAV-DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARW 98 (419)
Q Consensus 20 ~~la~~~-~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~ 98 (419)
+.|++|+ |..|++|+-+ +.+..+...+.|.++.-... ..++++..+ |+|-+|+-.... .+++.. ..+.++.+
T Consensus 16 ~eLlvGs~D~~IRvf~~~--e~~~Ei~e~~~v~~L~~~~~-~~F~Y~l~N-GTVGvY~~~~Rl--WRiKSK-~~~~~~~~ 88 (111)
T PF14783_consen 16 NELLVGSDDFEIRVFKGD--EIVAEITETDKVTSLCSLGG-GRFAYALAN-GTVGVYDRSQRL--WRIKSK-NQVTSMAF 88 (111)
T ss_pred ceEEEecCCcEEEEEeCC--cEEEEEecccceEEEEEcCC-CEEEEEecC-CEEEEEeCccee--eeeccC-CCeEEEEE
Confidence 5677777 7789999744 66777777888999988876 457777766 999999864433 334332 33555554
Q ss_pred CC---CCC-EEEEEecCCCeE
Q 014755 99 SP---DSR-HILTTSDFQLRL 115 (419)
Q Consensus 99 ~~---~~~-~l~~~~~~~~~i 115 (419)
.. ||. .|+++-.++ .|
T Consensus 89 ~D~~gdG~~eLI~GwsnG-kv 108 (111)
T PF14783_consen 89 YDINGDGVPELIVGWSNG-KV 108 (111)
T ss_pred EcCCCCCceEEEEEecCC-eE
Confidence 33 333 455555544 55
No 398
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.03 E-value=0.11 Score=41.02 Aligned_cols=213 Identities=13% Similarity=0.076 Sum_probs=110.4
Q ss_pred eEEcCCCCEEEEEe--CCeEEEEecCCCcEEEEeecCcceeEEEEecCC--CeEEEEeccCCeEEEEEcc--CCcceeee
Q 014755 13 SCFSPNARYIAVAV--DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDS--EYILCGLYKRLMIQAWSLT--QPEWTCKI 86 (419)
Q Consensus 13 ~~~s~d~~~la~~~--~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~~~~~~~g~i~iw~~~--~~~~~~~~ 86 (419)
..|.-+.+.|.... .+.|.-||.+..+..+..-...+..++.+--.+ +..+++...+-.|--||-. .-...+++
T Consensus 20 p~w~~~~~sLl~VDi~ag~v~r~D~~qn~v~ra~ie~p~~ag~ilpv~~~~q~~~v~~G~kf~i~nwd~~~~~a~v~~t~ 99 (310)
T KOG4499|consen 20 PHWDVERQSLLYVDIEAGEVHRYDIEQNKVYRAKIEGPPSAGFILPVEGGPQEFAVGCGSKFVIVNWDGVSESAKVYRTL 99 (310)
T ss_pred CceEEecceEEEEEeccCceehhhhhhhheEEEEEecCcceeEEEEecCCCceEEEeecceEEEEEcccccceeeeeeec
Confidence 44555555555554 566777888876655533222223444443222 2333333222234446632 22222222
Q ss_pred ec-----CCccEeEEEECCCCCEEEEEecC--------CCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeec
Q 014755 87 DE-----GLAGIAYARWSPDSRHILTTSDF--------QLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRR 153 (419)
Q Consensus 87 ~~-----~~~~v~~~~~~~~~~~l~~~~~~--------~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 153 (419)
.. .......-..+|+|++.+-.-.+ ++.++.|-... +...+...-.-.+.++|+.+.+.+......
T Consensus 100 ~ev~~d~kknR~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~~h-~v~~i~~~v~IsNgl~Wd~d~K~fY~iDsl 178 (310)
T KOG4499|consen 100 FEVQPDRKKNRLNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLAGH-QVELIWNCVGISNGLAWDSDAKKFYYIDSL 178 (310)
T ss_pred cccCchHHhcccccCccCCCCceeeeeeccccccccccccEEEEeccCC-CceeeehhccCCccccccccCcEEEEEccC
Confidence 11 12345666779999984433222 12344443322 111111111122788999888877766543
Q ss_pred CCCCeEEEEe--ccCCeE-----EEEEec----cccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCC
Q 014755 154 DCKDYINLLS--CHTWEI-----MGVFAV----DTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYES 221 (419)
Q Consensus 154 ~~~g~v~i~d--~~~~~~-----~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~ 221 (419)
+-.|.-|| ..+|.. +..++. .......++...+|.+.+. .-..++|..+|+ +|+.+..+.....
T Consensus 179 --n~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va--~~ng~~V~~~dp~tGK~L~eiklPt~ 254 (310)
T KOG4499|consen 179 --NYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVA--TFNGGTVQKVDPTTGKILLEIKLPTP 254 (310)
T ss_pred --ceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEE--EecCcEEEEECCCCCcEEEEEEcCCC
Confidence 24665566 555432 222221 1112233444455655443 233679999999 9999999887766
Q ss_pred CCceeEEEEcc
Q 014755 222 GLGVKSISWSP 232 (419)
Q Consensus 222 ~~~v~~~~~s~ 232 (419)
.+++++|--
T Consensus 255 --qitsccFgG 263 (310)
T KOG4499|consen 255 --QITSCCFGG 263 (310)
T ss_pred --ceEEEEecC
Confidence 799999964
No 399
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=97.02 E-value=0.25 Score=44.82 Aligned_cols=149 Identities=14% Similarity=0.214 Sum_probs=91.0
Q ss_pred cceeEEEEecCCCeEEEEec--cCCeEEEEEccCCcceeeeecCCccEeEEEECCC----CCEEEEEecCCCeEEEEEcC
Q 014755 48 DKISYIEWALDSEYILCGLY--KRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPD----SRHILTTSDFQLRLTVWSLL 121 (419)
Q Consensus 48 ~~v~~~~~s~~~~~l~~~~~--~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~~~~~i~iwd~~ 121 (419)
.++..++|. ||+.++-..- .+|.+++=| ....+....|..+.|.|- ...+++....+ .|.+|.+.
T Consensus 20 HPvhGlaWT-DGkqVvLT~L~l~~gE~kfGd-------s~viGqFEhV~GlsW~P~~~~~~paLLAVQHkk-hVtVWqL~ 90 (671)
T PF15390_consen 20 HPVHGLAWT-DGKQVVLTDLQLHNGEPKFGD-------SKVIGQFEHVHGLSWAPPCTADTPALLAVQHKK-HVTVWQLC 90 (671)
T ss_pred ccccceEec-CCCEEEEEeeeeeCCccccCC-------ccEeeccceeeeeeecCcccCCCCceEEEeccc-eEEEEEec
Confidence 478899998 6665554321 112222211 122345567899999984 44566666666 99999886
Q ss_pred C-----CeEEE--e--ccCCCCe--eeEEEccCCCEEEEEeecCCCCeEEEEeccC--CeEEEEEeccccceeeeeECCC
Q 014755 122 N-----TACVH--V--QSPKHAS--KGVAFTQDGKFAAICTRRDCKDYINLLSCHT--WEIMGVFAVDTLDLADIEWSPD 188 (419)
Q Consensus 122 ~-----~~~~~--~--~~~~~~~--~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~--~~~~~~~~~~~~~v~~~~~~~~ 188 (419)
- ++... . .....++ ..+.|+|....|++-... ..-.+++++. .+....+ ...+-|.|.+|.+|
T Consensus 91 ~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~---dvSV~~sV~~d~srVkaDi-~~~G~IhCACWT~D 166 (671)
T PF15390_consen 91 PSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTAR---DVSVLPSVHCDSSRVKADI-KTSGLIHCACWTKD 166 (671)
T ss_pred cCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecC---ceeEeeeeeeCCceEEEec-cCCceEEEEEecCc
Confidence 2 22222 1 1122333 788999999998887764 2223444433 2222223 34578999999999
Q ss_pred CCeEEEEcCCCCceEEEEcCCC
Q 014755 189 DSAIVIWDSPLEYKVLIYSPDG 210 (419)
Q Consensus 189 ~~~l~~~~~~~~~~i~~~d~~~ 210 (419)
|++|+++-++ .-.-++||-..
T Consensus 167 G~RLVVAvGS-sLHSyiWd~~q 187 (671)
T PF15390_consen 167 GQRLVVAVGS-SLHSYIWDSAQ 187 (671)
T ss_pred CCEEEEEeCC-eEEEEEecCch
Confidence 9999986443 45678898743
No 400
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=97.01 E-value=0.17 Score=42.81 Aligned_cols=223 Identities=16% Similarity=0.143 Sum_probs=104.3
Q ss_pred CeEEcCCCCEEEEEeCCeEEEEecCCCcEEEEee----cCcceeEEEEecCCCeEEEEeccCCeEEEEEccC-C-cceee
Q 014755 12 PSCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFS----CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQ-P-EWTCK 85 (419)
Q Consensus 12 ~~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~-~-~~~~~ 85 (419)
.|.|..+ +.+++|..+ +.+...+.|+.-.... -.+....+....++..++++ +.|. ||...+ | .....
T Consensus 66 ~I~f~~~-~g~ivG~~g-~ll~T~DgG~tW~~v~l~~~lpgs~~~i~~l~~~~~~l~~--~~G~--iy~T~DgG~tW~~~ 139 (302)
T PF14870_consen 66 SISFDGN-EGWIVGEPG-LLLHTTDGGKTWERVPLSSKLPGSPFGITALGDGSAELAG--DRGA--IYRTTDGGKTWQAV 139 (302)
T ss_dssp EEEEETT-EEEEEEETT-EEEEESSTTSS-EE----TT-SS-EEEEEEEETTEEEEEE--TT----EEEESSTTSSEEEE
T ss_pred EEEecCC-ceEEEcCCc-eEEEecCCCCCcEEeecCCCCCCCeeEEEEcCCCcEEEEc--CCCc--EEEeCCCCCCeeEc
Confidence 3566543 344444444 4455555555433322 12334444444454444443 2254 343333 3 33334
Q ss_pred eecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEe-
Q 014755 86 IDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLS- 163 (419)
Q Consensus 86 ~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d- 163 (419)
.......+..+.-++||+++++++... ...-||--...... -......+..+.|.|++...+.+ .. |.|+.=+
T Consensus 140 ~~~~~gs~~~~~r~~dG~~vavs~~G~-~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~G---g~~~~s~~ 214 (302)
T PF14870_consen 140 VSETSGSINDITRSSDGRYVAVSSRGN-FYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RG---GQIQFSDD 214 (302)
T ss_dssp E-S----EEEEEE-TTS-EEEEETTSS-EEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TT---TEEEEEE-
T ss_pred ccCCcceeEeEEECCCCcEEEEECccc-EEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CC---cEEEEccC
Confidence 445557788899999999888876544 66677765433333 34456789999999998776655 32 6787776
Q ss_pred ccCCeEEEE----EeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecC-CCCceeEEEEccCCCeEE
Q 014755 164 CHTWEIMGV----FAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYE-SGLGVKSISWSPCGQFLA 238 (419)
Q Consensus 164 ~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~ 238 (419)
....+.-.. +......+..++|.+++...++ +. .+.+..=.-.|+.-+...... -....+.+.|.+..+-++
T Consensus 215 ~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~--gg-~G~l~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~ 291 (302)
T PF14870_consen 215 PDDGETWSEPIIPIKTNGYGILDLAYRPPNEIWAV--GG-SGTLLVSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFV 291 (302)
T ss_dssp TTEEEEE---B-TTSS--S-EEEEEESSSS-EEEE--ES-TT-EEEESSTTSS-EE-GGGTTSSS---EEEEEETTEEEE
T ss_pred CCCccccccccCCcccCceeeEEEEecCCCCEEEE--eC-CccEEEeCCCCccceECccccCCCCceEEEEEcCCCceEE
Confidence 222222111 1112234788999998877776 22 444433222555554443311 122578888876655555
Q ss_pred EEEecCcEEEE
Q 014755 239 VGSYDQTLRVL 249 (419)
Q Consensus 239 ~~~~d~~i~v~ 249 (419)
. +.+|.|.-|
T Consensus 292 l-G~~G~ll~~ 301 (302)
T PF14870_consen 292 L-GQDGVLLRY 301 (302)
T ss_dssp E--STTEEEEE
T ss_pred E-CCCcEEEEe
Confidence 4 456766544
No 401
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=97.01 E-value=0.23 Score=44.11 Aligned_cols=82 Identities=12% Similarity=0.156 Sum_probs=54.6
Q ss_pred CCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc-cCC-C---eeEEEeCCC--------------C
Q 014755 328 DKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV-QKD-P---IRAATWDPT--------------C 388 (419)
Q Consensus 328 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~-~~~-~---v~~~~~s~~--------------~ 388 (419)
.+......+.+++.+|++++.|+...= |.|.++|+.++..+++.+ ..+ . +....-... .
T Consensus 302 ~l~D~~R~~~~i~~sP~~~laA~tDsl--GRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~ 379 (415)
T PF14655_consen 302 GLPDSKREGESICLSPSGRLAAVTDSL--GRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFA 379 (415)
T ss_pred eeccCCceEEEEEECCCCCEEEEEcCC--CcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcce
Confidence 334556668999999999988887665 999999999988776552 111 1 111111110 1
Q ss_pred C-eEEEEeCCCcEEEeecCCCeEE
Q 014755 389 T-RLVLCTGSSHLYMWTPSGAYCV 411 (419)
Q Consensus 389 ~-~l~s~~~dg~i~vw~~~~~~~~ 411 (419)
. +++.+-.-|.|.||.+..|..+
T Consensus 380 l~LvIyaprRg~lEvW~~~~g~Rv 403 (415)
T PF14655_consen 380 LFLVIYAPRRGILEVWSMRQGPRV 403 (415)
T ss_pred EEEEEEeccCCeEEEEecCCCCEE
Confidence 1 3456677899999999977654
No 402
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=96.94 E-value=0.0043 Score=35.54 Aligned_cols=32 Identities=28% Similarity=0.641 Sum_probs=28.8
Q ss_pred ceeEEEEccCCCeEEEEEecCcEEEEEcCCcee
Q 014755 224 GVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKT 256 (419)
Q Consensus 224 ~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~ 256 (419)
.|..++|+|...+||.++.+|.|.+|.+ +++.
T Consensus 13 ~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr 44 (47)
T PF12894_consen 13 RVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR 44 (47)
T ss_pred cEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence 6999999999999999999999999998 4443
No 403
>KOG2444 consensus WD40 repeat protein [General function prediction only]
Probab=96.83 E-value=0.0051 Score=48.10 Aligned_cols=62 Identities=11% Similarity=0.091 Sum_probs=50.1
Q ss_pred cCCeEEEEecCCCCceEEEeeccCCCceeecc-cC-CCeeEEEeCCCCCeEEEE--eCCCcEEEeecC
Q 014755 343 SDSQYICTRNDSMPTTLWIWDICRQEPAAILV-QK-DPIRAATWDPTCTRLVLC--TGSSHLYMWTPS 406 (419)
Q Consensus 343 ~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~-~~-~~v~~~~~s~~~~~l~s~--~~dg~i~vw~~~ 406 (419)
.++.+..++..+ |.|+.|++.-.+.+...+ |. .++.....+..+++|+++ |.|..++.|+++
T Consensus 112 ~~~~~~c~~~~d--g~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve 177 (238)
T KOG2444|consen 112 RDSSLGCVGAQD--GRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVE 177 (238)
T ss_pred cccceeEEeccC--CceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchh
Confidence 355678888888 999999999888887775 66 567777777777888888 888889999886
No 404
>PHA02790 Kelch-like protein; Provisional
Probab=96.82 E-value=0.17 Score=46.70 Aligned_cols=187 Identities=10% Similarity=0.015 Sum_probs=91.0
Q ss_pred CCCeEEEEeccC----CeEEEEEccCCcceeeeecCCccE-eEEEECCCCCEEEEEecCC-CeEEEEEcCCCeEEEeccC
Q 014755 58 DSEYILCGLYKR----LMIQAWSLTQPEWTCKIDEGLAGI-AYARWSPDSRHILTTSDFQ-LRLTVWSLLNTACVHVQSP 131 (419)
Q Consensus 58 ~~~~l~~~~~~~----g~i~iw~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~~~-~~i~iwd~~~~~~~~~~~~ 131 (419)
++..+++|+.++ ..+..||..++++...-....... .+++ .-++...+.||.++ ..+..||..+++.......
T Consensus 271 ~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v-~~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l 349 (480)
T PHA02790 271 GEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGV-PANNKLYVVGGLPNPTSVERWFHGDAAWVNMPSL 349 (480)
T ss_pred CCEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEE-EECCEEEEECCcCCCCceEEEECCCCeEEECCCC
Confidence 455556666431 257778888776543221111111 1222 23666666666422 3688899888776664333
Q ss_pred CCCe-eeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEE--EeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC
Q 014755 132 KHAS-KGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGV--FAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP 208 (419)
Q Consensus 132 ~~~~-~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~ 208 (419)
..+. ......-+|+..+.|+.++....+..||.++.+-... +.........+. -+++..++ + |.+..||+
T Consensus 350 ~~~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~~--~~~~IYv~--G---G~~e~ydp 422 (480)
T PHA02790 350 LKPRCNPAVASINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCALV--FGRRLFLV--G---RNAEFYCE 422 (480)
T ss_pred CCCCcccEEEEECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEEE--ECCEEEEE--C---CceEEecC
Confidence 3222 2222234566777777553334678898876543321 211111111122 24444444 2 35678888
Q ss_pred CCceEEEEeecCC-CCceeEEEEccCCCeEEEEEec-----CcEEEEEcCCc
Q 014755 209 DGRCLLKYQAYES-GLGVKSISWSPCGQFLAVGSYD-----QTLRVLNHLTW 254 (419)
Q Consensus 209 ~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~d-----~~i~v~d~~~~ 254 (419)
....-..+..... .... +++ --+|+..+.|+.+ .++..||..+.
T Consensus 423 ~~~~W~~~~~m~~~r~~~-~~~-v~~~~IYviGG~~~~~~~~~ve~Yd~~~~ 472 (480)
T PHA02790 423 SSNTWTLIDDPIYPRDNP-ELI-IVDNKLLLIGGFYRGSYIDTIEVYNNRTY 472 (480)
T ss_pred CCCcEeEcCCCCCCcccc-EEE-EECCEEEEECCcCCCcccceEEEEECCCC
Confidence 3322222222111 1112 222 2366777777754 35667776553
No 405
>KOG2079 consensus Vacuolar assembly/sorting protein VPS8 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.70 E-value=0.0089 Score=57.26 Aligned_cols=99 Identities=15% Similarity=0.201 Sum_probs=67.6
Q ss_pred CCEEEEEe-CCeEEEEecCCCcE--EEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeE
Q 014755 19 ARYIAVAV-DYRLVVRDAHSFKV--VQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAY 95 (419)
Q Consensus 19 ~~~la~~~-~~~i~i~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~ 95 (419)
+..++.|+ .+.+...|+.+.-. .+-....++|++++|+.+|+.++.|-.+ |.|.+||+..++..+.+..+..+.+.
T Consensus 99 ~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~-G~V~v~D~~~~k~l~~i~e~~ap~t~ 177 (1206)
T KOG2079|consen 99 VVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGD-GHVTVWDMHRAKILKVITEHGAPVTG 177 (1206)
T ss_pred eeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCC-CcEEEEEccCCcceeeeeecCCccce
Confidence 34566665 56677777654311 1122246799999999999999998876 99999999999988888877766444
Q ss_pred ---EEECCCCCEEEEEecCCCeEEEEEcC
Q 014755 96 ---ARWSPDSRHILTTSDFQLRLTVWSLL 121 (419)
Q Consensus 96 ---~~~~~~~~~l~~~~~~~~~i~iwd~~ 121 (419)
+.+..++..++++.. +|. +|.+.
T Consensus 178 vi~v~~t~~nS~llt~D~-~Gs--f~~lv 203 (1206)
T KOG2079|consen 178 VIFVGRTSQNSKLLTSDT-GGS--FWKLV 203 (1206)
T ss_pred EEEEEEeCCCcEEEEccC-CCc--eEEEE
Confidence 444556665665544 335 56543
No 406
>PHA03098 kelch-like protein; Provisional
Probab=96.67 E-value=0.25 Score=46.47 Aligned_cols=152 Identities=10% Similarity=0.021 Sum_probs=76.8
Q ss_pred CCCCEEEEEe-C------CeEEEEecCCCcEEEEeecC-cceeEEEEecCCCeEEEEeccC----CeEEEEEccCCccee
Q 014755 17 PNARYIAVAV-D------YRLVVRDAHSFKVVQLFSCL-DKISYIEWALDSEYILCGLYKR----LMIQAWSLTQPEWTC 84 (419)
Q Consensus 17 ~d~~~la~~~-~------~~i~i~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~~~----g~i~iw~~~~~~~~~ 84 (419)
.++..++.|+ + ..+..||..+.+....-... .....-...-+++..+.|+.+. ..+..||..++++..
T Consensus 293 ~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 372 (534)
T PHA03098 293 LNNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTVFNNRIYVIGGIYNSISLNTVESWKPGESKWRE 372 (534)
T ss_pred ECCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEEEECCEEEEEeCCCCCEecceEEEEcCCCCceee
Confidence 3455556654 2 14678888877664432211 1111112223677777777541 257788988776543
Q ss_pred eeecCCcc-EeEEEECCCCCEEEEEecCC-----CeEEEEEcCCCeEEEeccCCCCe-eeEEEccCCCEEEEEeecCC--
Q 014755 85 KIDEGLAG-IAYARWSPDSRHILTTSDFQ-----LRLTVWSLLNTACVHVQSPKHAS-KGVAFTQDGKFAAICTRRDC-- 155 (419)
Q Consensus 85 ~~~~~~~~-v~~~~~~~~~~~l~~~~~~~-----~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~-- 155 (419)
.-...... -.+++ .-+++..+.||... ..+..||..+++.......+.+. ...+...++...+.|+.+..
T Consensus 373 ~~~lp~~r~~~~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 451 (534)
T PHA03098 373 EPPLIFPRYNPCVV-NVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGCAIYHDGKIYVIGGISYIDN 451 (534)
T ss_pred CCCcCcCCccceEE-EECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCceEEEECCEEEEECCccCCCC
Confidence 21111111 11122 23566666666321 26889999987776633222211 12223345566666654321
Q ss_pred ---CCeEEEEeccCCeE
Q 014755 156 ---KDYINLLSCHTWEI 169 (419)
Q Consensus 156 ---~g~v~i~d~~~~~~ 169 (419)
...+.+||..+.+-
T Consensus 452 ~~~~~~v~~yd~~~~~W 468 (534)
T PHA03098 452 IKVYNIVESYNPVTNKW 468 (534)
T ss_pred CcccceEEEecCCCCce
Confidence 12488899876543
No 407
>PHA03098 kelch-like protein; Provisional
Probab=96.62 E-value=0.21 Score=46.95 Aligned_cols=190 Identities=9% Similarity=0.056 Sum_probs=90.5
Q ss_pred cCCCeEEEEeccC-----CeEEEEEccCCcceeeeecCC---ccEeEEEECCCCCEEEEEecCC----CeEEEEEcCCCe
Q 014755 57 LDSEYILCGLYKR-----LMIQAWSLTQPEWTCKIDEGL---AGIAYARWSPDSRHILTTSDFQ----LRLTVWSLLNTA 124 (419)
Q Consensus 57 ~~~~~l~~~~~~~-----g~i~iw~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~~~----~~i~iwd~~~~~ 124 (419)
.++..++.|+.+. ..+..||..+.++.. +.... .....+ .-+++.++.||.++ ..+..||..+++
T Consensus 293 ~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~-~~~~~~~R~~~~~~--~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~ 369 (534)
T PHA03098 293 LNNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNK-VPELIYPRKNPGVT--VFNNRIYVIGGIYNSISLNTVESWKPGESK 369 (534)
T ss_pred ECCEEEEECCCcCCCCeeccEEEEeCCCCeeeE-CCCCCcccccceEE--EECCEEEEEeCCCCCEecceEEEEcCCCCc
Confidence 3556666666431 257788888776642 22111 111222 23566667776542 257789988877
Q ss_pred EEEeccCCCCe-eeEEEccCCCEEEEEeecCC---CCeEEEEeccCCeEEEE--EeccccceeeeeECCCCCeEEEEcCC
Q 014755 125 CVHVQSPKHAS-KGVAFTQDGKFAAICTRRDC---KDYINLLSCHTWEIMGV--FAVDTLDLADIEWSPDDSAIVIWDSP 198 (419)
Q Consensus 125 ~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~---~g~v~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~~ 198 (419)
.......+.+. ...+..-+++..+.|+.... ...+..||+.+.+-... +....... ++. ..+++ +.+..+.
T Consensus 370 W~~~~~lp~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~-~~~-~~~~~-iyv~GG~ 446 (534)
T PHA03098 370 WREEPPLIFPRYNPCVVNVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGG-CAI-YHDGK-IYVIGGI 446 (534)
T ss_pred eeeCCCcCcCCccceEEEECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCc-eEE-EECCE-EEEECCc
Confidence 66533222222 11122235666666663211 14688999876443221 11111111 122 12344 4443222
Q ss_pred CC-------ceEEEEcCCCceEEEEeecCC-CCceeEEEEccCCCeEEEEEec-----CcEEEEEcCCc
Q 014755 199 LE-------YKVLIYSPDGRCLLKYQAYES-GLGVKSISWSPCGQFLAVGSYD-----QTLRVLNHLTW 254 (419)
Q Consensus 199 ~~-------~~i~~~d~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~d-----~~i~v~d~~~~ 254 (419)
.. ..+..||+....-..+..... ......+.+ +++.++.|+.+ ..+.+||..+.
T Consensus 447 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~ 513 (534)
T PHA03098 447 SYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLCIF--NNKIYVVGGDKYEYYINEIEVYDDKTN 513 (534)
T ss_pred cCCCCCcccceEEEecCCCCceeeCCCCCcccccceEEEE--CCEEEEEcCCcCCcccceeEEEeCCCC
Confidence 11 248889983322222221111 101112222 66777777654 46788887654
No 408
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=96.60 E-value=0.13 Score=35.66 Aligned_cols=100 Identities=13% Similarity=0.105 Sum_probs=60.4
Q ss_pred eeEEEEec---CC-CeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeE
Q 014755 50 ISYIEWAL---DS-EYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTAC 125 (419)
Q Consensus 50 v~~~~~s~---~~-~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~ 125 (419)
|++|++.. || +.|++|+.| ..|++|+-+ +.+..+.. ...|+++.-... ..++.+-.++ +|-+|+-.....
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D-~~IRvf~~~--e~~~Ei~e-~~~v~~L~~~~~-~~F~Y~l~NG-TVGvY~~~~RlW 75 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDD-FEIRVFKGD--EIVAEITE-TDKVTSLCSLGG-GRFAYALANG-TVGVYDRSQRLW 75 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCC-cEEEEEeCC--cEEEEEec-ccceEEEEEcCC-CEEEEEecCC-EEEEEeCcceee
Confidence 66777765 32 478888866 799999843 55556643 446677776655 5577777776 999997643322
Q ss_pred EEeccCCCCeeeEEE---ccCC-CEEEEEeecCCCCeEE
Q 014755 126 VHVQSPKHASKGVAF---TQDG-KFAAICTRRDCKDYIN 160 (419)
Q Consensus 126 ~~~~~~~~~~~~~~~---~~~~-~~l~~~~~~~~~g~v~ 160 (419)
+.. .+..+.++++ ..|| ..|++|-.+ |.|-
T Consensus 76 -RiK-SK~~~~~~~~~D~~gdG~~eLI~Gwsn---Gkve 109 (111)
T PF14783_consen 76 -RIK-SKNQVTSMAFYDINGDGVPELIVGWSN---GKVE 109 (111)
T ss_pred -eec-cCCCeEEEEEEcCCCCCceEEEEEecC---CeEE
Confidence 222 3334555444 3333 456666554 5553
No 409
>KOG2079 consensus Vacuolar assembly/sorting protein VPS8 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.53 E-value=0.011 Score=56.78 Aligned_cols=71 Identities=21% Similarity=0.119 Sum_probs=55.2
Q ss_pred CCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeec
Q 014755 189 DSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 189 ~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 261 (419)
+..+++ ++..|.+...|.+++.-.........++|++++|+.+|+.++.|-.+|.|.+||+..+++++.+.
T Consensus 99 ~~~ivi--~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~ 169 (1206)
T KOG2079|consen 99 VVPIVI--GTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVIT 169 (1206)
T ss_pred eeeEEE--EcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeee
Confidence 445666 56678888888866543223333344589999999999999999999999999999998888776
No 410
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=96.52 E-value=0.3 Score=43.26 Aligned_cols=138 Identities=12% Similarity=0.071 Sum_probs=78.4
Q ss_pred cccCeEEcCCCCEEEEEe-------------CCeEEEEecCC--CcE--EEEe-ecCcceeEEEEecCCCeEEEEeccCC
Q 014755 9 QTGPSCFSPNARYIAVAV-------------DYRLVVRDAHS--FKV--VQLF-SCLDKISYIEWALDSEYILCGLYKRL 70 (419)
Q Consensus 9 ~~~~~~~s~d~~~la~~~-------------~~~i~i~~~~~--~~~--~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~g 70 (419)
....|+|.++|+++++-. .+.|.+++-.+ ++. ...+ ........|++.++| |+++.. .
T Consensus 15 ~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G--lyV~~~--~ 90 (367)
T TIGR02604 15 NPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG--VYVATP--P 90 (367)
T ss_pred CCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC--EEEeCC--C
Confidence 344489999999887752 13677775432 332 2233 344556889999998 444443 3
Q ss_pred eEEEE-EccCC-----cceee---eec----CCccEeEEEECCCCCEEEEEecC------------------CCeEEEEE
Q 014755 71 MIQAW-SLTQP-----EWTCK---IDE----GLAGIAYARWSPDSRHILTTSDF------------------QLRLTVWS 119 (419)
Q Consensus 71 ~i~iw-~~~~~-----~~~~~---~~~----~~~~v~~~~~~~~~~~l~~~~~~------------------~~~i~iwd 119 (419)
.|..+ |.+.. +.... +.. +......++|.|||...++.+.. .+.|.-++
T Consensus 91 ~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~ 170 (367)
T TIGR02604 91 DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYN 170 (367)
T ss_pred eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEe
Confidence 45544 44321 21111 211 12346789999999876655521 12455566
Q ss_pred cCCCeEEEeccCCCCeeeEEEccCCCEEEEE
Q 014755 120 LLNTACVHVQSPKHASKGVAFTQDGKFAAIC 150 (419)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 150 (419)
..+++...+...-.....++|+|+|+.+++-
T Consensus 171 pdg~~~e~~a~G~rnp~Gl~~d~~G~l~~td 201 (367)
T TIGR02604 171 PDGGKLRVVAHGFQNPYGHSVDSWGDVFFCD 201 (367)
T ss_pred cCCCeEEEEecCcCCCccceECCCCCEEEEc
Confidence 6655544433333334788999988776553
No 411
>KOG2280 consensus Vacuolar assembly/sorting protein VPS16 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.52 E-value=0.6 Score=43.74 Aligned_cols=203 Identities=14% Similarity=0.191 Sum_probs=101.0
Q ss_pred CeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEee--cCCCCceeEEEEccCC
Q 014755 157 DYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQA--YESGLGVKSISWSPCG 234 (419)
Q Consensus 157 g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~~v~~~~~s~~~ 234 (419)
-.|+|++.. |+++..+.-....+..+.|+.+..+|++ ..+|.+++|+.-|..+..... ......|..+.+..+|
T Consensus 64 ~~I~If~~s-G~lL~~~~w~~~~lI~mgWs~~eeLI~v---~k~g~v~Vy~~~ge~ie~~svg~e~~~~~I~ec~~f~~G 139 (829)
T KOG2280|consen 64 PYIRIFNIS-GQLLGRILWKHGELIGMGWSDDEELICV---QKDGTVHVYGLLGEFIESNSVGFESQMSDIVECRFFHNG 139 (829)
T ss_pred eeEEEEecc-ccchHHHHhcCCCeeeecccCCceEEEE---eccceEEEeecchhhhcccccccccccCceeEEEEecCc
Confidence 368888865 6666655555568899999999888887 568999999997766555311 1111245555555566
Q ss_pred CeEEEEEecCcEEEEEcCCceeeeeecc-cccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEe
Q 014755 235 QFLAVGSYDQTLRVLNHLTWKTFAEFMH-LSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEV 313 (419)
Q Consensus 235 ~~l~~~~~d~~i~v~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (419)
-.+++. +|.+.+-+-.....++.+.. +.....+ .+|.-...+.. ...+. ......+ ...+..
T Consensus 140 Vavlt~--~g~v~~i~~~~~~~~~~~~diP~~~~~~---~~Wt~~~~~~~--~~~ll--------~v~~~v~--~~~~q~ 202 (829)
T KOG2280|consen 140 VAVLTV--SGQVILINGVEEPKLRKMPDIPYNELPK---SCWTVFQPHRQ--STILL--------DVDVAVG--LHICQV 202 (829)
T ss_pred eEEEec--CCcEEEEcCCCcchhhhCCCCCCccCCC---cceeEecCCCc--ceeEE--------eechhhh--hcccce
Confidence 444433 44444433222212222221 1111000 11111000000 00000 0000000 000000
Q ss_pred ccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc--cCCCeeEEEeCCCC
Q 014755 314 MEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV--QKDPIRAATWDPTC 388 (419)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~--~~~~v~~~~~s~~~ 388 (419)
........ .+......+..+..||+.++||.-... |.|.+-+.+..+....+. ...+...++|.-+.
T Consensus 203 ~~~~~q~~------~~~~~~~~~~ki~VS~n~~~laLyt~~--G~i~~vs~D~~~~lce~~~~~~~~p~qm~Wcgnd 271 (829)
T KOG2280|consen 203 EESRVQLH------ALSWPNSSVVKISVSPNRRFLALYTET--GKIWVVSIDLSQILCEFNCTDHDPPKQMAWCGND 271 (829)
T ss_pred eccccccc------ccCCCCceEEEEEEcCCcceEEEEecC--CcEEEEecchhhhhhccCCCCCCchHhceeecCC
Confidence 00000000 011112457789999999999999888 999999888766554442 23333366665444
No 412
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=96.50 E-value=0.5 Score=41.13 Aligned_cols=101 Identities=15% Similarity=0.217 Sum_probs=55.4
Q ss_pred ceeEEEEecCCCeEEEEeccCCeEEEEEccCCcc---eeee----ecCCccEeEEEECCC---CCEEEEEec-C------
Q 014755 49 KISYIEWALDSEYILCGLYKRLMIQAWSLTQPEW---TCKI----DEGLAGIAYARWSPD---SRHILTTSD-F------ 111 (419)
Q Consensus 49 ~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~---~~~~----~~~~~~v~~~~~~~~---~~~l~~~~~-~------ 111 (419)
..+.|+|.|||+.+++-. . |.|++++ ..+.. +..+ .........++++|+ ..+|++... .
T Consensus 3 ~P~~~a~~pdG~l~v~e~-~-G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~ 79 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVAER-S-GRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGD 79 (331)
T ss_dssp SEEEEEEETTSCEEEEET-T-TEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSS
T ss_pred CceEEEEeCCCcEEEEeC-C-ceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCC
Confidence 457899999998777653 4 8999999 44433 1112 123456889999994 344444332 1
Q ss_pred -CCeEEEEEcCCC-------eEEE--ecc---CCCCeeeEEEccCCCEEEEEee
Q 014755 112 -QLRLTVWSLLNT-------ACVH--VQS---PKHASKGVAFTQDGKFAAICTR 152 (419)
Q Consensus 112 -~~~i~iwd~~~~-------~~~~--~~~---~~~~~~~~~~~~~~~~l~~~~~ 152 (419)
...|.-|.+..+ +.+. ... ..+....+.|.|||.+.++.+.
T Consensus 80 ~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~ 133 (331)
T PF07995_consen 80 NDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGD 133 (331)
T ss_dssp EEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-
T ss_pred cceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCC
Confidence 013444555433 1111 222 3344578999999966655554
No 413
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=96.49 E-value=0.47 Score=42.05 Aligned_cols=143 Identities=15% Similarity=0.120 Sum_probs=79.9
Q ss_pred ccEeEEEECCCCCEEEEEec-----------CCCeEEEEEcCC--CeE---EEeccCCCCeeeEEEccCCCEEEEEeecC
Q 014755 91 AGIAYARWSPDSRHILTTSD-----------FQLRLTVWSLLN--TAC---VHVQSPKHASKGVAFTQDGKFAAICTRRD 154 (419)
Q Consensus 91 ~~v~~~~~~~~~~~l~~~~~-----------~~~~i~iwd~~~--~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 154 (419)
.....|+|.++|+.+++... .+..|.+++-.+ |+. ..+...-.....+++.+++ . +++..
T Consensus 14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-l-yV~~~-- 89 (367)
T TIGR02604 14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-V-YVATP-- 89 (367)
T ss_pred CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-E-EEeCC--
Confidence 34577899999987666431 112677776543 322 1232233345889999988 4 44433
Q ss_pred CCCeEEEE-eccC-----CeE--E-EEEecc----ccceeeeeECCCCCeEEEEcCC-----------------CCceEE
Q 014755 155 CKDYINLL-SCHT-----WEI--M-GVFAVD----TLDLADIEWSPDDSAIVIWDSP-----------------LEYKVL 204 (419)
Q Consensus 155 ~~g~v~i~-d~~~-----~~~--~-~~~~~~----~~~v~~~~~~~~~~~l~~~~~~-----------------~~~~i~ 204 (419)
..|..+ |... ++. + ..+... ......+.|.|||.+.+..... ..+.+.
T Consensus 90 --~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~ 167 (367)
T TIGR02604 90 --PDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLF 167 (367)
T ss_pred --CeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEE
Confidence 355544 4422 111 1 112221 2347789999999766542210 015677
Q ss_pred EEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEE
Q 014755 205 IYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGS 241 (419)
Q Consensus 205 ~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 241 (419)
.++.++..+..+... . .....++|+|+|+++++-.
T Consensus 168 r~~pdg~~~e~~a~G-~-rnp~Gl~~d~~G~l~~tdn 202 (367)
T TIGR02604 168 RYNPDGGKLRVVAHG-F-QNPYGHSVDSWGDVFFCDN 202 (367)
T ss_pred EEecCCCeEEEEecC-c-CCCccceECCCCCEEEEcc
Confidence 777766555444322 1 2467899999998876644
No 414
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=96.42 E-value=0.56 Score=40.84 Aligned_cols=66 Identities=11% Similarity=0.124 Sum_probs=42.1
Q ss_pred cceEEEEEcc-------CCeEEEEecCCCCceEEEeeccCCC-ce---eecc-cCCCeeEEEeCCCCCeEEEEeCCCcEE
Q 014755 334 QGIGLMSWSS-------DSQYICTRNDSMPTTLWIWDICRQE-PA---AILV-QKDPIRAATWDPTCTRLVLCTGSSHLY 401 (419)
Q Consensus 334 ~~v~~~~~s~-------~g~~l~~~~~d~~~~i~iwd~~~~~-~~---~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~ 401 (419)
..+..+.|-. .|.++++.-.. +.|....++.+. .. .++. ...++..+++.|||.+.++...+|.|.
T Consensus 253 ~ap~G~~~y~g~~fp~~~g~~~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~Lyv~~d~~G~iy 330 (331)
T PF07995_consen 253 SAPTGIIFYRGSAFPEYRGDLFVADYGG--GRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGALYVSDDSDGKIY 330 (331)
T ss_dssp --EEEEEEE-SSSSGGGTTEEEEEETTT--TEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSEEEEEE-TTTTEE
T ss_pred cccCceEEECCccCccccCcEEEecCCC--CEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCeEEEEECCCCeEe
Confidence 3455566642 46677766655 788888887542 22 2223 455899999999999888888888764
No 415
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=96.34 E-value=0.23 Score=45.08 Aligned_cols=116 Identities=12% Similarity=0.118 Sum_probs=76.6
Q ss_pred hcccccCeEEcCCC-----CEEEEEeCCeEEEEecC-----CCcEEEEe--ec--Ccc--eeEEEEecCCCeEEEEeccC
Q 014755 6 AYKQTGPSCFSPNA-----RYIAVAVDYRLVVRDAH-----SFKVVQLF--SC--LDK--ISYIEWALDSEYILCGLYKR 69 (419)
Q Consensus 6 ~~~~~~~~~~s~d~-----~~la~~~~~~i~i~~~~-----~~~~~~~~--~~--~~~--v~~~~~s~~~~~l~~~~~~~ 69 (419)
.|.|.-.++|+|-+ .+||+-....|.+|.+. ..+.+... .. .-+ -..+.|+|....|++-...|
T Consensus 55 qFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~d 134 (671)
T PF15390_consen 55 QFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARD 134 (671)
T ss_pred ccceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCc
Confidence 45677779999853 57777778889999875 23333211 11 112 24678999999998877664
Q ss_pred CeEEEEEccCCc--ceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCC
Q 014755 70 LMIQAWSLTQPE--WTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNT 123 (419)
Q Consensus 70 g~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~ 123 (419)
.-.++++.... ....+ ...+.|.|.+|.+||++|+++-...-.-++||-..+
T Consensus 135 -vSV~~sV~~d~srVkaDi-~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~qK 188 (671)
T PF15390_consen 135 -VSVLPSVHCDSSRVKADI-KTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSAQK 188 (671)
T ss_pred -eeEeeeeeeCCceEEEec-cCCceEEEEEecCcCCEEEEEeCCeEEEEEecCchh
Confidence 33455555332 22223 456789999999999999887554446788986544
No 416
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=96.34 E-value=0.55 Score=39.86 Aligned_cols=271 Identities=11% Similarity=0.016 Sum_probs=121.1
Q ss_pred cCcceeEEEEecCCCeEEEEeccCCeEEEEEccC-Ccceeeee-cC----CccEeEEEECCCCCEEEEEecCCCeEEEEE
Q 014755 46 CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQ-PEWTCKID-EG----LAGIAYARWSPDSRHILTTSDFQLRLTVWS 119 (419)
Q Consensus 46 ~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~-~~~~~~~~-~~----~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd 119 (419)
-...+..|.|..+..-.+++. . +. |+...+ |+.-.... .. .....++.|..+ + ...++..+ +.+..
T Consensus 15 t~~~l~dV~F~d~~~G~~VG~-~-g~--il~T~DGG~tW~~~~~~~~~~~~~~l~~I~f~~~-~-g~ivG~~g--~ll~T 86 (302)
T PF14870_consen 15 TDKPLLDVAFVDPNHGWAVGA-Y-GT--ILKTTDGGKTWQPVSLDLDNPFDYHLNSISFDGN-E-GWIVGEPG--LLLHT 86 (302)
T ss_dssp -SS-EEEEEESSSS-EEEEET-T-TE--EEEESSTTSS-EE-----S-----EEEEEEEETT-E-EEEEEETT--EEEEE
T ss_pred CCCceEEEEEecCCEEEEEec-C-CE--EEEECCCCccccccccCCCccceeeEEEEEecCC-c-eEEEcCCc--eEEEe
Confidence 456899999996666677765 3 54 344433 32211111 11 123567777543 3 34445544 43444
Q ss_pred cCCCeEEE-ec---cCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCe-EEEEEeccccceeeeeECCCCCeEEE
Q 014755 120 LLNTACVH-VQ---SPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWE-IMGVFAVDTLDLADIEWSPDDSAIVI 194 (419)
Q Consensus 120 ~~~~~~~~-~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~ 194 (419)
...|+.-. +. ..+.....+....++...+++ .. |.|+.=. +.++ -..........+..+..++||+++++
T Consensus 87 ~DgG~tW~~v~l~~~lpgs~~~i~~l~~~~~~l~~-~~---G~iy~T~-DgG~tW~~~~~~~~gs~~~~~r~~dG~~vav 161 (302)
T PF14870_consen 87 TDGGKTWERVPLSSKLPGSPFGITALGDGSAELAG-DR---GAIYRTT-DGGKTWQAVVSETSGSINDITRSSDGRYVAV 161 (302)
T ss_dssp SSTTSS-EE----TT-SS-EEEEEEEETTEEEEEE-TT-----EEEES-STTSSEEEEE-S----EEEEEE-TTS-EEEE
T ss_pred cCCCCCcEEeecCCCCCCCeeEEEEcCCCcEEEEc-CC---CcEEEeC-CCCCCeeEcccCCcceeEeEEECCCCcEEEE
Confidence 44443322 21 112233334433444333332 21 3433321 1221 12223334467888889999999988
Q ss_pred EcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEE-cCCceeeeeecccccccCCCccc
Q 014755 195 WDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLN-HLTWKTFAEFMHLSTVRGPCFPA 273 (419)
Q Consensus 195 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d-~~~~~~~~~~~~~~~~~~~~~~~ 273 (419)
+....-+.-||.-...-...... ....+.+|.|+|++.+.+.+ ..|.|++=+ ....+.... ...+
T Consensus 162 --s~~G~~~~s~~~G~~~w~~~~r~-~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~~--~~~~-------- 227 (302)
T PF14870_consen 162 --SSRGNFYSSWDPGQTTWQPHNRN-SSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETWSE--PIIP-------- 227 (302)
T ss_dssp --ETTSSEEEEE-TT-SS-EEEE---SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE-----B-T--------
T ss_pred --ECcccEEEEecCCCccceEEccC-ccceehhceecCCCCEEEEe-CCcEEEEccCCCCcccccc--ccCC--------
Confidence 44344555677632222222221 22379999999998776654 677777765 111111111 0000
Q ss_pred eeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecC
Q 014755 274 VFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRND 353 (419)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 353 (419)
.......+.+++|.+++...|+|+.
T Consensus 228 -------------------------------------------------------~~~~~~~~ld~a~~~~~~~wa~gg~ 252 (302)
T PF14870_consen 228 -------------------------------------------------------IKTNGYGILDLAYRPPNEIWAVGGS 252 (302)
T ss_dssp -------------------------------------------------------TSS--S-EEEEEESSSS-EEEEEST
T ss_pred -------------------------------------------------------cccCceeeEEEEecCCCCEEEEeCC
Confidence 0012234789999999998888876
Q ss_pred CCCceEEEeeccCCCceeec----ccCCCeeEEEeCCCCCeEEEEeCCCcEEEe
Q 014755 354 SMPTTLWIWDICRQEPAAIL----VQKDPIRAATWDPTCTRLVLCTGSSHLYMW 403 (419)
Q Consensus 354 d~~~~i~iwd~~~~~~~~~~----~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw 403 (419)
|.+. ...+.|+-=... .-...++.+.|.++.+-+| .+.+|.|.-|
T Consensus 253 ---G~l~-~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~-lG~~G~ll~~ 301 (302)
T PF14870_consen 253 ---GTLL-VSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFV-LGQDGVLLRY 301 (302)
T ss_dssp ---T-EE-EESSTTSS-EE-GGGTTSSS---EEEEEETTEEEE-E-STTEEEEE
T ss_pred ---ccEE-EeCCCCccceECccccCCCCceEEEEEcCCCceEE-ECCCcEEEEe
Confidence 5443 344555422222 2355688899976655444 5678877655
No 417
>KOG2377 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.25 E-value=0.61 Score=41.00 Aligned_cols=124 Identities=16% Similarity=0.147 Sum_probs=81.4
Q ss_pred CceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccc
Q 014755 223 LGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDA 302 (419)
Q Consensus 223 ~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (419)
++|.++.||+|.+.||+--.+.+|.+++....+....+.+...+
T Consensus 67 G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~------------------------------------ 110 (657)
T KOG2377|consen 67 GEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKT------------------------------------ 110 (657)
T ss_pred CceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhcc------------------------------------
Confidence 48999999999999999999999999987543433333222111
Q ss_pred cCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccC--CCceeecccCCCee
Q 014755 303 TNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICR--QEPAAILVQKDPIR 380 (419)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~--~~~~~~~~~~~~v~ 380 (419)
....|....|+.+ .-+|.... .-+.+|.... .++.....|.-.|.
T Consensus 111 -----------------------------k~~~IlGF~W~~s-~e~A~i~~---~G~e~y~v~pekrslRlVks~~~nvn 157 (657)
T KOG2377|consen 111 -----------------------------KNANILGFCWTSS-TEIAFITD---QGIEFYQVLPEKRSLRLVKSHNLNVN 157 (657)
T ss_pred -----------------------------CcceeEEEEEecC-eeEEEEec---CCeEEEEEchhhhhhhhhhhcccCcc
Confidence 2233677788766 44555544 3466665543 33333445888899
Q ss_pred EEEeCCCCCeEEEEe--CCCcEEEeecCCCeEEecCC
Q 014755 381 AATWDPTCTRLVLCT--GSSHLYMWTPSGAYCVSNPL 415 (419)
Q Consensus 381 ~~~~s~~~~~l~s~~--~dg~i~vw~~~~~~~~~~~~ 415 (419)
-..|.++-+.+.-++ ..+++.=+.+.++.+.++|-
T Consensus 158 Wy~yc~et~v~LL~t~~~~n~lnpf~~~~~~v~kLPk 194 (657)
T KOG2377|consen 158 WYMYCPETAVILLSTTVLENVLNPFHFRAGTMSKLPK 194 (657)
T ss_pred EEEEccccceEeeeccccccccccEEEeeceeeeccc
Confidence 999999988443333 45566667777777777763
No 418
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=96.24 E-value=0.32 Score=45.48 Aligned_cols=72 Identities=13% Similarity=0.228 Sum_probs=46.1
Q ss_pred cceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEc--cCCCeEEEEEecCcEEEEEc
Q 014755 178 LDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWS--PCGQFLAVGSYDQTLRVLNH 251 (419)
Q Consensus 178 ~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s--~~~~~l~~~~~d~~i~v~d~ 251 (419)
..+.-+.-+.-++..++ ......+.+||..+..+..-........|.++.|. |+|+.+++.+....|.+|-.
T Consensus 30 ~~~~li~gss~~k~a~V--~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q 103 (631)
T PF12234_consen 30 SNPSLISGSSIKKIAVV--DSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQ 103 (631)
T ss_pred CCcceEeecccCcEEEE--ECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEc
Confidence 34444444554444444 34467899999944333222222233479999886 68899999999999999864
No 419
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=96.22 E-value=1.3 Score=43.10 Aligned_cols=113 Identities=12% Similarity=0.154 Sum_probs=65.7
Q ss_pred CCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccc--------eeeeeECC----------------CCCeEEEEcCCC
Q 014755 144 GKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLD--------LADIEWSP----------------DDSAIVIWDSPL 199 (419)
Q Consensus 144 ~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~--------v~~~~~~~----------------~~~~l~~~~~~~ 199 (419)
+..+++++.+ +.|.-+|.++|+.+-.+...... .+.+++.. .+..+++ .+.
T Consensus 194 gg~lYv~t~~---~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~--~T~ 268 (764)
T TIGR03074 194 GDTLYLCTPH---NKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIIL--PTS 268 (764)
T ss_pred CCEEEEECCC---CeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEE--ecC
Confidence 3455555554 67888888888877665543211 12233321 2335666 566
Q ss_pred CceEEEEcC-CCceEEEEeecCC----------CCceeEEEEcc--CCCeEEEEEe----------cCcEEEEEcCCcee
Q 014755 200 EYKVLIYSP-DGRCLLKYQAYES----------GLGVKSISWSP--CGQFLAVGSY----------DQTLRVLNHLTWKT 256 (419)
Q Consensus 200 ~~~i~~~d~-~~~~~~~~~~~~~----------~~~v~~~~~s~--~~~~l~~~~~----------d~~i~v~d~~~~~~ 256 (419)
|+.++-.|. +|+.+..+..... ...-..+.-.| .+..+++|+. +|.|+-+|.++|+.
T Consensus 269 Dg~LiALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl 348 (764)
T TIGR03074 269 DARLIALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGAL 348 (764)
T ss_pred CCeEEEEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcE
Confidence 899999998 8888876542210 00000111122 1335555542 57899999999999
Q ss_pred eeeec
Q 014755 257 FAEFM 261 (419)
Q Consensus 257 ~~~~~ 261 (419)
+-.+.
T Consensus 349 ~W~~~ 353 (764)
T TIGR03074 349 VWAWD 353 (764)
T ss_pred eeEEe
Confidence 88876
No 420
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.22 E-value=0.56 Score=38.77 Aligned_cols=162 Identities=9% Similarity=0.140 Sum_probs=94.0
Q ss_pred ecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccC-CCCeeeEEEccCCCEEEEEeecCCCCeEEEEec
Q 014755 87 DEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSP-KHASKGVAFTQDGKFAAICTRRDCKDYINLLSC 164 (419)
Q Consensus 87 ~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~ 164 (419)
.+-...+.++.|+|+.+.|++..+.. .-.++=-..|+.++ ++.. -+....+.+..++++.++--.+ +.+.++.+
T Consensus 82 ~g~~~nvS~LTynp~~rtLFav~n~p-~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~---~~l~~~~v 157 (316)
T COG3204 82 LGETANVSSLTYNPDTRTLFAVTNKP-AAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERD---RALYLFTV 157 (316)
T ss_pred ccccccccceeeCCCcceEEEecCCC-ceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhc---ceEEEEEE
Confidence 34455699999999999999998776 45555555677666 3222 2334678888777766665544 67777766
Q ss_pred cCCeEEEE-----E-----eccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCC--ceEEEEeecCC-----CCceeE
Q 014755 165 HTWEIMGV-----F-----AVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDG--RCLLKYQAYES-----GLGVKS 227 (419)
Q Consensus 165 ~~~~~~~~-----~-----~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~--~~~~~~~~~~~-----~~~v~~ 227 (419)
.....+.. + ...+.....++|.|....++++....--.|+.|+... -..+....+.. -..+.+
T Consensus 158 d~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSg 237 (316)
T COG3204 158 DADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSG 237 (316)
T ss_pred cCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeecccc
Confidence 54322111 1 1124567889999999988884332223344444311 11111111110 024778
Q ss_pred EEEccCC-CeEEEEEecCcEEEEEcC
Q 014755 228 ISWSPCG-QFLAVGSYDQTLRVLNHL 252 (419)
Q Consensus 228 ~~~s~~~-~~l~~~~~d~~i~v~d~~ 252 (419)
+.|++.. .+++-+.+++.+.-.|..
T Consensus 238 l~~~~~~~~LLVLS~ESr~l~Evd~~ 263 (316)
T COG3204 238 LEFNAITNSLLVLSDESRRLLEVDLS 263 (316)
T ss_pred ceecCCCCcEEEEecCCceEEEEecC
Confidence 8888754 455555566666666643
No 421
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=96.21 E-value=0.2 Score=44.45 Aligned_cols=142 Identities=13% Similarity=0.106 Sum_probs=91.3
Q ss_pred EcCCCCEEEEEe--CCeEEEEecCCCcEEEEeecCcceeEEEEecCC--------CeEEEEeccCCeEEEEEcc-CCcce
Q 014755 15 FSPNARYIAVAV--DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDS--------EYILCGLYKRLMIQAWSLT-QPEWT 83 (419)
Q Consensus 15 ~s~d~~~la~~~--~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~--------~~l~~~~~~~g~i~iw~~~-~~~~~ 83 (419)
...|..+|..-+ .+.++-.|++.|+++....-.+.+ -+.|.|+. +.|+-.+ + ..|.-.|.+ .|..+
T Consensus 475 h~~dssli~~dg~~~~kLykmDIErGkvveeW~~~ddv-vVqy~p~~kf~qmt~eqtlvGlS-~-~svFrIDPR~~gNKi 551 (776)
T COG5167 475 HDNDSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDV-VVQYNPYFKFQQMTDEQTLVGLS-D-YSVFRIDPRARGNKI 551 (776)
T ss_pred ecCCcceEEecCCCcccceeeecccceeeeEeecCCcc-eeecCCchhHHhcCccceEEeec-c-cceEEecccccCCce
Confidence 344555665544 456888899999999888755555 67788753 3344333 4 345545554 23222
Q ss_pred eeeecCCccEeEEEECC----CCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCe
Q 014755 84 CKIDEGLAGIAYARWSP----DSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDY 158 (419)
Q Consensus 84 ~~~~~~~~~v~~~~~~~----~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~ 158 (419)
. ......-.+.-.|+. ..-++++++..+ -|++||.-...... +++.+..+..+..+.+|+++++.+.. .
T Consensus 552 ~-v~esKdY~tKn~Fss~~tTesGyIa~as~kG-DirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~----y 625 (776)
T COG5167 552 K-VVESKDYKTKNKFSSGMTTESGYIAAASRKG-DIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKN----Y 625 (776)
T ss_pred e-eeeehhccccccccccccccCceEEEecCCC-ceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecc----e
Confidence 1 112222222222332 445788888866 99999976644444 77888889999999999999888764 8
Q ss_pred EEEEecc
Q 014755 159 INLLSCH 165 (419)
Q Consensus 159 v~i~d~~ 165 (419)
+.+.|++
T Consensus 626 llL~d~~ 632 (776)
T COG5167 626 LLLTDVP 632 (776)
T ss_pred EEEEecc
Confidence 8888875
No 422
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=96.16 E-value=0.25 Score=43.88 Aligned_cols=100 Identities=12% Similarity=0.206 Sum_probs=64.1
Q ss_pred cCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCC--------eEEEEcCCCCceEEEEcC--CCc
Q 014755 142 QDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDS--------AIVIWDSPLEYKVLIYSP--DGR 211 (419)
Q Consensus 142 ~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~--------~l~~~~~~~~~~i~~~d~--~~~ 211 (419)
.+...|+.-+.. ...++-.|++.|+.+..+..+..- -+.|.|+.+ .|+ +-++..|.-.|+ .|.
T Consensus 477 ~dssli~~dg~~--~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlv---GlS~~svFrIDPR~~gN 549 (776)
T COG5167 477 NDSSLIYLDGGE--RDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLV---GLSDYSVFRIDPRARGN 549 (776)
T ss_pred CCcceEEecCCC--cccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEE---eecccceEEecccccCC
Confidence 344555554432 358888999999999999887654 566777543 232 344677888887 665
Q ss_pred eEEEEeecCCCCceeEEEEcc----CCCeEEEEEecCcEEEEEc
Q 014755 212 CLLKYQAYESGLGVKSISWSP----CGQFLAVGSYDQTLRVLNH 251 (419)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~s~----~~~~l~~~~~d~~i~v~d~ 251 (419)
.+....... .++--.|+. ..-+||.++..|.|++||-
T Consensus 550 Ki~v~esKd---Y~tKn~Fss~~tTesGyIa~as~kGDirLyDR 590 (776)
T COG5167 550 KIKVVESKD---YKTKNKFSSGMTTESGYIAAASRKGDIRLYDR 590 (776)
T ss_pred ceeeeeehh---ccccccccccccccCceEEEecCCCceeeehh
Confidence 555443322 233223332 3349999999999999994
No 423
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.14 E-value=0.46 Score=37.05 Aligned_cols=153 Identities=15% Similarity=0.149 Sum_probs=80.3
Q ss_pred CCCEEEEEecC-CCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEecccc
Q 014755 101 DSRHILTTSDF-QLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTL 178 (419)
Q Consensus 101 ~~~~l~~~~~~-~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~ 178 (419)
+|..+.+.+.. ...|++||+.+|+... .......+..=-...-+.++..-... +|.-..+|.++.+++..+.-. +
T Consensus 55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~--egvaf~~d~~t~~~lg~~~y~-G 131 (262)
T COG3823 55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWK--EGVAFKYDADTLEELGRFSYE-G 131 (262)
T ss_pred CCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEec--cceeEEEChHHhhhhcccccC-C
Confidence 55666665532 2379999999988776 22222233222222234455444443 367888888887766554422 2
Q ss_pred ceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCc---eeEEEEccCCCeEEEEEecCcEEEEEcCCc
Q 014755 179 DLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLG---VKSISWSPCGQFLAVGSYDQTLRVLNHLTW 254 (419)
Q Consensus 179 ~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~---v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~ 254 (419)
.-.. ...|++.++..++ ...++.-|+ +-....++.......+ ++.+.|- +|...|-.=.+..|...+.++|
T Consensus 132 eGWg--Lt~d~~~LimsdG--satL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~V-dG~lyANVw~t~~I~rI~p~sG 206 (262)
T COG3823 132 EGWG--LTSDDKNLIMSDG--SATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWV-DGELYANVWQTTRIARIDPDSG 206 (262)
T ss_pred ccee--eecCCcceEeeCC--ceEEEecCHHHhhhcceEEEEECCeecccccceeee-ccEEEEeeeeecceEEEcCCCC
Confidence 2223 3356666776333 456666666 3333333322222112 2233332 4555554444556777777887
Q ss_pred eeeeeec
Q 014755 255 KTFAEFM 261 (419)
Q Consensus 255 ~~~~~~~ 261 (419)
+.+..++
T Consensus 207 rV~~wid 213 (262)
T COG3823 207 RVVAWID 213 (262)
T ss_pred cEEEEEE
Confidence 7766654
No 424
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=96.05 E-value=1.6 Score=42.53 Aligned_cols=201 Identities=10% Similarity=0.018 Sum_probs=115.2
Q ss_pred CCeEEEEeccCCeEEEEEccCCcceeeeecCCcc--------EeEEEEC----------------CCCCEEEEEecCCCe
Q 014755 59 SEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAG--------IAYARWS----------------PDSRHILTTSDFQLR 114 (419)
Q Consensus 59 ~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~--------v~~~~~~----------------~~~~~l~~~~~~~~~ 114 (419)
+..|++++.+ +.|.-.|..+|+.+-+....... ...+.+. ..+..++.++.|+ .
T Consensus 194 gg~lYv~t~~-~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg-~ 271 (764)
T TIGR03074 194 GDTLYLCTPH-NKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDA-R 271 (764)
T ss_pred CCEEEEECCC-CeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCC-e
Confidence 4566666655 78999999999877665432210 1112221 1344777777777 8
Q ss_pred EEEEEcCCCeEEEeccCCCCe-------------eeEEEcc--CCCEEEEEee--c-----CCCCeEEEEeccCCeEEEE
Q 014755 115 LTVWSLLNTACVHVQSPKHAS-------------KGVAFTQ--DGKFAAICTR--R-----DCKDYINLLSCHTWEIMGV 172 (419)
Q Consensus 115 i~iwd~~~~~~~~~~~~~~~~-------------~~~~~~~--~~~~l~~~~~--~-----~~~g~v~i~d~~~~~~~~~ 172 (419)
+.-.|.++|+...-......+ ....-.| .+..+++++. | ...|.|+-+|.++|+.+-.
T Consensus 272 LiALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~ 351 (764)
T TIGR03074 272 LIALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWA 351 (764)
T ss_pred EEEEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeE
Confidence 999999998877522221111 0111111 1335555542 1 1147899999999998766
Q ss_pred Eeccc---------cc--------e-eeeeECCCCCeEEEEcC----------------CCCceEEEEcC-CCceEEEEe
Q 014755 173 FAVDT---------LD--------L-ADIEWSPDDSAIVIWDS----------------PLEYKVLIYSP-DGRCLLKYQ 217 (419)
Q Consensus 173 ~~~~~---------~~--------v-~~~~~~~~~~~l~~~~~----------------~~~~~i~~~d~-~~~~~~~~~ 217 (419)
+.... +. + ..+++.+....+++-.+ ...+.|.-.|. +|+..-.++
T Consensus 352 ~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvALD~~TGk~~W~~Q 431 (764)
T TIGR03074 352 WDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVALDATTGKERWVFQ 431 (764)
T ss_pred EecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEEEeCCCCceEEEec
Confidence 54210 00 0 22344444444443111 11256777888 888877776
Q ss_pred ecCCC-------CceeEEEEcc-CCC---eEEEEEecCcEEEEEcCCceeeeeec
Q 014755 218 AYESG-------LGVKSISWSP-CGQ---FLAVGSYDQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 218 ~~~~~-------~~v~~~~~s~-~~~---~l~~~~~d~~i~v~d~~~~~~~~~~~ 261 (419)
...|. ....-+.+.. +|+ .++.++.+|.++++|-++|+++...+
T Consensus 432 ~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~~ 486 (764)
T TIGR03074 432 TVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPVE 486 (764)
T ss_pred ccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeece
Confidence 53331 0111122322 553 78889999999999999999887654
No 425
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=95.90 E-value=0.77 Score=37.58 Aligned_cols=194 Identities=13% Similarity=-0.003 Sum_probs=121.0
Q ss_pred cceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE
Q 014755 48 DKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH 127 (419)
Q Consensus 48 ~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~ 127 (419)
..-..++-.|||..-+++... +.|--.|..+|+....-.+.......+..-|||..-++-+.. .|.-.|-++.+..+
T Consensus 62 ~ap~dvapapdG~VWft~qg~-gaiGhLdP~tGev~~ypLg~Ga~Phgiv~gpdg~~Witd~~~--aI~R~dpkt~evt~ 138 (353)
T COG4257 62 SAPFDVAPAPDGAVWFTAQGT-GAIGHLDPATGEVETYPLGSGASPHGIVVGPDGSAWITDTGL--AIGRLDPKTLEVTR 138 (353)
T ss_pred CCccccccCCCCceEEecCcc-ccceecCCCCCceEEEecCCCCCCceEEECCCCCeeEecCcc--eeEEecCcccceEE
Confidence 456778889999888888765 788888999998776555556667888889999877664432 56677777777666
Q ss_pred ecc----CCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEec-cccceeeeeECCCCCeEEEEcCCCCce
Q 014755 128 VQS----PKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAV-DTLDLADIEWSPDDSAIVIWDSPLEYK 202 (419)
Q Consensus 128 ~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~ 202 (419)
+.. .........|.+.|..-+++.. |.---.|..+ ..++.+.. .....+.++..|||...+. .-.++.
T Consensus 139 f~lp~~~a~~nlet~vfD~~G~lWFt~q~----G~yGrLdPa~-~~i~vfpaPqG~gpyGi~atpdGsvwya--slagna 211 (353)
T COG4257 139 FPLPLEHADANLETAVFDPWGNLWFTGQI----GAYGRLDPAR-NVISVFPAPQGGGPYGICATPDGSVWYA--SLAGNA 211 (353)
T ss_pred eecccccCCCcccceeeCCCccEEEeecc----ccceecCccc-CceeeeccCCCCCCcceEECCCCcEEEE--eccccc
Confidence 332 2334478899999988777653 1111222221 12222222 1244677888899987665 344667
Q ss_pred EEEEcC-CCceEEEEeecCC-CCceeEEEEccCCCeEEEEEecCcEEEEEcC
Q 014755 203 VLIYSP-DGRCLLKYQAYES-GLGVKSISWSPCGQFLAVGSYDQTLRVLNHL 252 (419)
Q Consensus 203 i~~~d~-~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~ 252 (419)
|-..|. ++.. ..+...+. ...-..+--+|.|+.-++-...+.+..||..
T Consensus 212 iaridp~~~~a-ev~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs 262 (353)
T COG4257 212 IARIDPFAGHA-EVVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPS 262 (353)
T ss_pred eEEcccccCCc-ceecCCCcccccccccccCccCcEEEeccCCceeeEeCcc
Confidence 777777 5522 22222211 1234556666777776766666667766644
No 426
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=95.79 E-value=1.6 Score=40.28 Aligned_cols=166 Identities=11% Similarity=0.064 Sum_probs=82.8
Q ss_pred CeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCC-CceeEEEEccCCC
Q 014755 157 DYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESG-LGVKSISWSPCGQ 235 (419)
Q Consensus 157 g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~v~~~~~s~~~~ 235 (419)
+...++|.+ |.....+.........+...++|.+++... ..++.+|..|+.+......... ..=..+..-|+|+
T Consensus 128 ~~~~~iD~~-G~Vrw~~~~~~~~~~~~~~l~nG~ll~~~~----~~~~e~D~~G~v~~~~~l~~~~~~~HHD~~~l~nGn 202 (477)
T PF05935_consen 128 SYTYLIDNN-GDVRWYLPLDSGSDNSFKQLPNGNLLIGSG----NRLYEIDLLGKVIWEYDLPGGYYDFHHDIDELPNGN 202 (477)
T ss_dssp EEEEEEETT-S-EEEEE-GGGT--SSEEE-TTS-EEEEEB----TEEEEE-TT--EEEEEE--TTEE-B-S-EEE-TTS-
T ss_pred ceEEEECCC-ccEEEEEccCccccceeeEcCCCCEEEecC----CceEEEcCCCCEEEeeecCCcccccccccEECCCCC
Confidence 466777755 555544444333333366778999887633 7899999999887776654420 0135678889999
Q ss_pred eEEEEEe-------------cCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccc
Q 014755 236 FLAVGSY-------------DQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDA 302 (419)
Q Consensus 236 ~l~~~~~-------------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (419)
+|+.+.. ...|..+| .+|+.+..+....-+...........
T Consensus 203 ~L~l~~~~~~~~~~~~~~~~~D~Ivevd-~tG~vv~~wd~~d~ld~~~~~~~~~~------------------------- 256 (477)
T PF05935_consen 203 LLILASETKYVDEDKDVDTVEDVIVEVD-PTGEVVWEWDFFDHLDPYRDTVLKPY------------------------- 256 (477)
T ss_dssp EEEEEEETTEE-TS-EE---S-EEEEE--TTS-EEEEEEGGGTS-TT--TTGGT--------------------------
T ss_pred EEEEEeecccccCCCCccEecCEEEEEC-CCCCEEEEEehHHhCCcccccccccc-------------------------
Confidence 9888772 12466677 88888777652221100000000000
Q ss_pred cCCceEEEEEeccCCCCCCCCCCCCCCCCCC--cceEEEEEcc-CCeEEEEecCCCCceEEEeeccCCCceeecc
Q 014755 303 TNGHIKVRYEVMEIPISLPFQKPPTDKPNPK--QGIGLMSWSS-DSQYICTRNDSMPTTLWIWDICRQEPAAILV 374 (419)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~s~-~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~ 374 (419)
............ --++++.+.+ ++.+++++-.- ..|...|..++++...++
T Consensus 257 -------------------~~~~~~~~~~~~DW~H~Nsi~yd~~dd~iivSsR~~--s~V~~Id~~t~~i~Wilg 310 (477)
T PF05935_consen 257 -------------------PYGDISGSGGGRDWLHINSIDYDPSDDSIIVSSRHQ--SAVIKIDYRTGKIKWILG 310 (477)
T ss_dssp --------------------SSSSS-SSTTSBS--EEEEEEETTTTEEEEEETTT---EEEEEE-TTS-EEEEES
T ss_pred -------------------cccccccCCCCCCccccCccEEeCCCCeEEEEcCcc--eEEEEEECCCCcEEEEeC
Confidence 000000000011 1278889988 77777777665 688899988998887775
No 427
>KOG3630 consensus Nuclear pore complex, Nup214/CAN component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=95.64 E-value=1.1 Score=44.27 Aligned_cols=113 Identities=10% Similarity=0.086 Sum_probs=69.3
Q ss_pred CeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEE-----EEec------cccceeeeeECCCCCeEEEEcCCCCce
Q 014755 134 ASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMG-----VFAV------DTLDLADIEWSPDDSAIVIWDSPLEYK 202 (419)
Q Consensus 134 ~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~-----~~~~------~~~~v~~~~~~~~~~~l~~~~~~~~~~ 202 (419)
.+..+...+|+...++..... .-.|..||+++...-. .+.. ......++.|+|.-...... ...|+.
T Consensus 102 pi~~~v~~~D~t~s~v~~tsn-g~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av-~l~dls 179 (1405)
T KOG3630|consen 102 PIVIFVCFHDATDSVVVSTSN-GEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAV-DLSDLS 179 (1405)
T ss_pred cceEEEeccCCceEEEEEecC-CceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhh-hccccc
Confidence 346666777876665554432 2479999997632211 1111 12335677788764433222 345777
Q ss_pred EEEEcC--CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEc
Q 014755 203 VLIYSP--DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNH 251 (419)
Q Consensus 203 i~~~d~--~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~ 251 (419)
|++..+ .......+... ...++++|+|.|+.++.|-..|++.-|..
T Consensus 180 l~V~~~~~~~~~v~s~p~t---~~~Tav~WSprGKQl~iG~nnGt~vQy~P 227 (1405)
T KOG3630|consen 180 LRVKSTKQLAQNVTSFPVT---NSQTAVLWSPRGKQLFIGRNNGTEVQYEP 227 (1405)
T ss_pred hhhhhhhhhhhhhcccCcc---cceeeEEeccccceeeEecCCCeEEEeec
Confidence 877776 22222332222 26899999999999999999999887764
No 428
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=95.62 E-value=0.34 Score=45.32 Aligned_cols=105 Identities=19% Similarity=0.184 Sum_probs=70.8
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEE--eecCcceeEEEEe--cCCCeEEEEeccCCeEEEEEcc-----CC--
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQL--FSCLDKISYIEWA--LDSEYILCGLYKRLMIQAWSLT-----QP-- 80 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~--~~~~~~v~~~~~s--~~~~~l~~~~~~~g~i~iw~~~-----~~-- 80 (419)
+.-|.-++..++-+ ...+.|||...+..... +...+.|.++.|. |+|+.+++.+.. +.|.++.-. +.
T Consensus 35 i~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~-~~v~l~~Q~R~dy~~~~p 113 (631)
T PF12234_consen 35 ISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFP-HHVLLYTQLRYDYTNKGP 113 (631)
T ss_pred EeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcC-cEEEEEEccchhhhcCCc
Confidence 44455455444444 45699999998875543 3457899999996 589988888877 688888542 11
Q ss_pred --cceee--eecCC-ccEeEEEECCCCCEEEEEecCCCeEEEEEcC
Q 014755 81 --EWTCK--IDEGL-AGIAYARWSPDSRHILTTSDFQLRLTVWSLL 121 (419)
Q Consensus 81 --~~~~~--~~~~~-~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~ 121 (419)
..++. +..++ .+|.+..|.++|..++.++. ++.++|-.
T Consensus 114 ~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sGN---qlfv~dk~ 156 (631)
T PF12234_consen 114 SWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSGN---QLFVFDKW 156 (631)
T ss_pred ccceeEEEEeecCCCCCccceeEecCCeEEEEeCC---EEEEECCC
Confidence 12222 23344 57899999999987666653 78888753
No 429
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=95.62 E-value=0.14 Score=41.24 Aligned_cols=75 Identities=12% Similarity=0.274 Sum_probs=56.7
Q ss_pred EEEccCCeEEEEecCCCCceEEEeeccCCCcee-------ec--------ccCCCeeEEEeCCCCCeEEEEeCCCcEEEe
Q 014755 339 MSWSSDSQYICTRNDSMPTTLWIWDICRQEPAA-------IL--------VQKDPIRAATWDPTCTRLVLCTGSSHLYMW 403 (419)
Q Consensus 339 ~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~-------~~--------~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw 403 (419)
+.+..++.+|++.+.+ |.+++||+.+++... ++ .....|..+.++.+|.-|++-+ +|..+.|
T Consensus 16 ~~l~~~~~~Ll~iT~~--G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y 92 (219)
T PF07569_consen 16 SFLECNGSYLLAITSS--GLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSY 92 (219)
T ss_pred EEEEeCCCEEEEEeCC--CeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEe
Confidence 3456778889988888 999999999876432 12 2446789999999998777665 5789999
Q ss_pred ecCCCeEEecCCC
Q 014755 404 TPSGAYCVSNPLP 416 (419)
Q Consensus 404 ~~~~~~~~~~~~~ 416 (419)
+.+-+..+.+..+
T Consensus 93 ~~~L~~W~~vsd~ 105 (219)
T PF07569_consen 93 SPDLGCWIRVSDS 105 (219)
T ss_pred ccccceeEEeccc
Confidence 9987777765543
No 430
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=95.57 E-value=0.083 Score=29.32 Aligned_cols=32 Identities=0% Similarity=0.007 Sum_probs=24.1
Q ss_pred cceeEEEEecCCC---eEEEEeccCCeEEEEEccCC
Q 014755 48 DKISYIEWALDSE---YILCGLYKRLMIQAWSLTQP 80 (419)
Q Consensus 48 ~~v~~~~~s~~~~---~l~~~~~~~g~i~iw~~~~~ 80 (419)
+.|.++.|||+.. +|+.+- +.|.|.|+|+.++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E-~~g~vhi~D~R~~ 35 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAE-HQGRVHIVDTRSN 35 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEc-cCCeEEEEEcccC
Confidence 4689999998544 565554 5689999999853
No 431
>KOG2444 consensus WD40 repeat protein [General function prediction only]
Probab=95.50 E-value=0.055 Score=42.54 Aligned_cols=101 Identities=13% Similarity=-0.044 Sum_probs=59.5
Q ss_pred CEEEEEe-CCeEEEEecCC-CcEEEEe-ecCcceeEEEEe-cCCCeEEEEeccCCeEEEEEccCCcceeeeecCC-ccEe
Q 014755 20 RYIAVAV-DYRLVVRDAHS-FKVVQLF-SCLDKISYIEWA-LDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGL-AGIA 94 (419)
Q Consensus 20 ~~la~~~-~~~i~i~~~~~-~~~~~~~-~~~~~v~~~~~s-~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~-~~v~ 94 (419)
..+++|. ++.|.+|+... +...... .....|.++.-. .++.+..+++.+ |.|+.|+...++.+.....|. .++.
T Consensus 71 ~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~d-g~ir~~n~~p~k~~g~~g~h~~~~~e 149 (238)
T KOG2444|consen 71 AKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQD-GRIRACNIKPNKVLGYVGQHNFESGE 149 (238)
T ss_pred ceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccC-CceeeeccccCceeeeeccccCCCcc
Confidence 4455554 88888887652 1111111 122333333222 244456666665 899999999888777776676 4555
Q ss_pred EEEECCCCCEEEEE--ecCCCeEEEEEcCC
Q 014755 95 YARWSPDSRHILTT--SDFQLRLTVWSLLN 122 (419)
Q Consensus 95 ~~~~~~~~~~l~~~--~~~~~~i~iwd~~~ 122 (419)
....+..++.+..+ +.+. .++.|+++.
T Consensus 150 ~~ivv~sd~~i~~a~~S~d~-~~k~W~ve~ 178 (238)
T KOG2444|consen 150 ELIVVGSDEFLKIADTSHDR-VLKKWNVEK 178 (238)
T ss_pred eeEEecCCceEEeeccccch-hhhhcchhh
Confidence 55555556666666 5555 677777654
No 432
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=95.48 E-value=0.31 Score=39.71 Aligned_cols=141 Identities=14% Similarity=0.069 Sum_probs=84.8
Q ss_pred EEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCC--eEEEEEccC----Ccceeee--ecCCccEeEEEECC
Q 014755 30 LVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRL--MIQAWSLTQ----PEWTCKI--DEGLAGIAYARWSP 100 (419)
Q Consensus 30 i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g--~i~iw~~~~----~~~~~~~--~~~~~~v~~~~~~~ 100 (419)
-.+||+.+++.....- ..-.+.+=.+-|||++|.+|+..+| .+++++..+ ..+.... ......-....-.|
T Consensus 48 s~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L~ 127 (243)
T PF07250_consen 48 SVEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTLP 127 (243)
T ss_pred EEEEecCCCcEEeccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceECC
Confidence 4589999888765432 2233444567889999999886443 588888654 1111111 01112233445568
Q ss_pred CCCEEEEEecCCCeEEEEEcCC--CeEEEe---ccC----CCCe-eeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEE
Q 014755 101 DSRHILTTSDFQLRLTVWSLLN--TACVHV---QSP----KHAS-KGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIM 170 (419)
Q Consensus 101 ~~~~l~~~~~~~~~i~iwd~~~--~~~~~~---~~~----~~~~-~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~ 170 (419)
||+.|+.++.......+|.-+. .....+ ... .... ..+...|+|+.++.+.. .-.|||..+.+.+
T Consensus 128 DG~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~-----~s~i~d~~~n~v~ 202 (243)
T PF07250_consen 128 DGRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANR-----GSIIYDYKTNTVV 202 (243)
T ss_pred CCCEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcC-----CcEEEeCCCCeEE
Confidence 9999999987765666666532 112211 111 1111 46777899999998875 3567798887776
Q ss_pred EEEec
Q 014755 171 GVFAV 175 (419)
Q Consensus 171 ~~~~~ 175 (419)
+.+..
T Consensus 203 ~~lP~ 207 (243)
T PF07250_consen 203 RTLPD 207 (243)
T ss_pred eeCCC
Confidence 66654
No 433
>KOG2377 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.46 E-value=0.52 Score=41.39 Aligned_cols=136 Identities=11% Similarity=0.064 Sum_probs=85.7
Q ss_pred eEEcCCCCEEEEEeCCeEEEEecCCC--cEEEE--eecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcce----e
Q 014755 13 SCFSPNARYIAVAVDYRLVVRDAHSF--KVVQL--FSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWT----C 84 (419)
Q Consensus 13 ~~~s~d~~~la~~~~~~i~i~~~~~~--~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~----~ 84 (419)
+-|..-++.|.+...+.+.=|-.... .+... ....++|.++.||+|.+.||+--.+ .+|.+++....+.. .
T Consensus 28 vFfDDaNkqlfavrSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~-~~v~f~nf~~d~~~l~~~~ 106 (657)
T KOG2377|consen 28 VFFDDANKQLFAVRSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQRTS-KTVDFCNFIPDNSQLEYTQ 106 (657)
T ss_pred eeeccCcceEEEEecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEEecC-ceEEEEecCCCchhhHHHH
Confidence 55555555555554444444443322 22222 2356799999999999999999877 69999998544322 1
Q ss_pred eeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC--CeEEEeccCCCCeeeEEEccCCCEEEEEee
Q 014755 85 KIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN--TACVHVQSPKHASKGVAFTQDGKFAAICTR 152 (419)
Q Consensus 85 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 152 (419)
+.+.....|....|+.+ .-++.....| +.+|.... ........++..|.-..|.++.+.+..++.
T Consensus 107 ~ck~k~~~IlGF~W~~s-~e~A~i~~~G--~e~y~v~pekrslRlVks~~~nvnWy~yc~et~v~LL~t~ 173 (657)
T KOG2377|consen 107 ECKTKNANILGFCWTSS-TEIAFITDQG--IEFYQVLPEKRSLRLVKSHNLNVNWYMYCPETAVILLSTT 173 (657)
T ss_pred HhccCcceeEEEEEecC-eeEEEEecCC--eEEEEEchhhhhhhhhhhcccCccEEEEccccceEeeecc
Confidence 22333456899999866 5677776655 55665543 222225667777888888888876655543
No 434
>PHA02790 Kelch-like protein; Provisional
Probab=95.41 E-value=2.2 Score=39.45 Aligned_cols=144 Identities=7% Similarity=-0.057 Sum_probs=73.5
Q ss_pred CCCEEEEEe-C-----CeEEEEecCCCcEEEEeecC-cc-eeEEEEecCCCeEEEEeccC-CeEEEEEccCCcceeeeec
Q 014755 18 NARYIAVAV-D-----YRLVVRDAHSFKVVQLFSCL-DK-ISYIEWALDSEYILCGLYKR-LMIQAWSLTQPEWTCKIDE 88 (419)
Q Consensus 18 d~~~la~~~-~-----~~i~i~~~~~~~~~~~~~~~-~~-v~~~~~s~~~~~l~~~~~~~-g~i~iw~~~~~~~~~~~~~ 88 (419)
++.++++|+ + ..+..||..+++......-. .. -.+++ .-++...+.|+.+. ..+..||..++++... ..
T Consensus 271 ~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v-~~~~~iYviGG~~~~~sve~ydp~~n~W~~~-~~ 348 (480)
T PHA02790 271 GEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGV-PANNKLYVVGGLPNPTSVERWFHGDAAWVNM-PS 348 (480)
T ss_pred CCEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEE-EECCEEEEECCcCCCCceEEEECCCCeEEEC-CC
Confidence 445556665 2 24777888877655433211 11 11222 34677777776531 3688888877655422 11
Q ss_pred CCccE-eEEEECCCCCEEEEEecCC--CeEEEEEcCCCeEEEeccCCCCe-eeEEEccCCCEEEEEeecCCCCeEEEEec
Q 014755 89 GLAGI-AYARWSPDSRHILTTSDFQ--LRLTVWSLLNTACVHVQSPKHAS-KGVAFTQDGKFAAICTRRDCKDYINLLSC 164 (419)
Q Consensus 89 ~~~~v-~~~~~~~~~~~l~~~~~~~--~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~g~v~i~d~ 164 (419)
-..+. ......-+|+..+.||.++ ..+..||.++.+.........+. ...+..-+++..+.| |.+.+||.
T Consensus 349 l~~~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~~~~~~IYv~G------G~~e~ydp 422 (480)
T PHA02790 349 LLKPRCNPAVASINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCALVFGRRLFLVG------RNAEFYCE 422 (480)
T ss_pred CCCCCcccEEEEECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEEEECCEEEEEC------CceEEecC
Confidence 11111 1111223666666666432 25778999888776633322222 112223345444444 35677888
Q ss_pred cCCeE
Q 014755 165 HTWEI 169 (419)
Q Consensus 165 ~~~~~ 169 (419)
++.+-
T Consensus 423 ~~~~W 427 (480)
T PHA02790 423 SSNTW 427 (480)
T ss_pred CCCcE
Confidence 76443
No 435
>KOG2280 consensus Vacuolar assembly/sorting protein VPS16 [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.29 E-value=2.7 Score=39.72 Aligned_cols=182 Identities=14% Similarity=0.097 Sum_probs=94.7
Q ss_pred CeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE----eccCCCCeeeEEEccCCC
Q 014755 70 LMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH----VQSPKHASKGVAFTQDGK 145 (419)
Q Consensus 70 g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~----~~~~~~~~~~~~~~~~~~ 145 (419)
-.|+|++.. |+.+..+.-...++..+.|+.+.. |+....++ ++.+|++....... .......|..+.+..+|-
T Consensus 64 ~~I~If~~s-G~lL~~~~w~~~~lI~mgWs~~ee-LI~v~k~g-~v~Vy~~~ge~ie~~svg~e~~~~~I~ec~~f~~GV 140 (829)
T KOG2280|consen 64 PYIRIFNIS-GQLLGRILWKHGELIGMGWSDDEE-LICVQKDG-TVHVYGLLGEFIESNSVGFESQMSDIVECRFFHNGV 140 (829)
T ss_pred eeEEEEecc-ccchHHHHhcCCCeeeecccCCce-EEEEeccc-eEEEeecchhhhcccccccccccCceeEEEEecCce
Confidence 368888864 555555444445888999997765 55556666 99999987643332 223334455555555554
Q ss_pred EEEEEeecCCCCeEEEEeccCCeEEEEEec---cccceeeeeECCCCC-eEEEEcCC-CC-ceEEEEcCCCceEEEEeec
Q 014755 146 FAAICTRRDCKDYINLLSCHTWEIMGVFAV---DTLDLADIEWSPDDS-AIVIWDSP-LE-YKVLIYSPDGRCLLKYQAY 219 (419)
Q Consensus 146 ~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~---~~~~v~~~~~~~~~~-~l~~~~~~-~~-~~i~~~d~~~~~~~~~~~~ 219 (419)
.+.+.+ |.+.+.+-........+.. ...+..|....+++. ...+.+.. .. -.+..-+........+...
T Consensus 141 avlt~~-----g~v~~i~~~~~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~~~~~q~~~~~~q~~~~~~~ 215 (829)
T KOG2280|consen 141 AVLTVS-----GQVILINGVEEPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVGLHICQVEESRVQLHALSWP 215 (829)
T ss_pred EEEecC-----CcEEEEcCCCcchhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhhhcccceecccccccccCCC
Confidence 444433 3444433222222222222 111112222222221 11111010 00 0011111111111222221
Q ss_pred CCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeec
Q 014755 220 ESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 220 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 261 (419)
...+..+..||+.++|+--...|.|.+-+....+.+..+.
T Consensus 216 --~~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~ 255 (829)
T KOG2280|consen 216 --NSSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFN 255 (829)
T ss_pred --CceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccC
Confidence 1268889999999999999999999999888777766665
No 436
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=95.21 E-value=0.11 Score=28.45 Aligned_cols=32 Identities=13% Similarity=0.182 Sum_probs=22.4
Q ss_pred eecCcceeEEEEecCCCeEEEEeccC--CeEEEE
Q 014755 44 FSCLDKISYIEWALDSEYILCGLYKR--LMIQAW 75 (419)
Q Consensus 44 ~~~~~~v~~~~~s~~~~~l~~~~~~~--g~i~iw 75 (419)
......-....|||||+.|+.++..+ |.-.||
T Consensus 5 t~~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 5 TNSPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp S-SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred ccCCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 34556678889999999999888665 555555
No 437
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=95.19 E-value=0.67 Score=38.90 Aligned_cols=103 Identities=9% Similarity=0.204 Sum_probs=68.2
Q ss_pred CeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEe-----cCCCeEEEEEcCCCeEEEecc-----CCCCeeeEE
Q 014755 70 LMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTS-----DFQLRLTVWSLLNTACVHVQS-----PKHASKGVA 139 (419)
Q Consensus 70 g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----~~~~~i~iwd~~~~~~~~~~~-----~~~~~~~~~ 139 (419)
..|++||..+.++...-..-.+.|..+.|..+.+.++.+. .....+..||..+.....+.. .+.++..+.
T Consensus 16 ~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~~~~~~~s~~ipgpv~a~~ 95 (281)
T PF12768_consen 16 PGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWSSLGGGSSNSIPGPVTALT 95 (281)
T ss_pred CEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeeeecCCcccccCCCcEEEEE
Confidence 4799999998887766656678899999997766666663 123378899999887766443 246677776
Q ss_pred Ecc-CCCEEE-EEeecCCCCeEEEEeccCCeEEEE
Q 014755 140 FTQ-DGKFAA-ICTRRDCKDYINLLSCHTWEIMGV 172 (419)
Q Consensus 140 ~~~-~~~~l~-~~~~~~~~g~v~i~d~~~~~~~~~ 172 (419)
+.. |+..+. .|....+...|..||-.++..+..
T Consensus 96 ~~~~d~~~~~~aG~~~~g~~~l~~~dGs~W~~i~~ 130 (281)
T PF12768_consen 96 FISNDGSNFWVAGRSANGSTFLMKYDGSSWSSIGS 130 (281)
T ss_pred eeccCCceEEEeceecCCCceEEEEcCCceEeccc
Confidence 633 444344 443233334677887776665544
No 438
>KOG3630 consensus Nuclear pore complex, Nup214/CAN component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=95.19 E-value=0.43 Score=46.86 Aligned_cols=146 Identities=13% Similarity=0.057 Sum_probs=88.9
Q ss_pred ccEeEEEECCCCCEEEEEe-cCCCeEEEEEcCCCeEEE------eccC------CCCeeeEEEccCCCE-EEEEeecCCC
Q 014755 91 AGIAYARWSPDSRHILTTS-DFQLRLTVWSLLNTACVH------VQSP------KHASKGVAFTQDGKF-AAICTRRDCK 156 (419)
Q Consensus 91 ~~v~~~~~~~~~~~l~~~~-~~~~~i~iwd~~~~~~~~------~~~~------~~~~~~~~~~~~~~~-l~~~~~~~~~ 156 (419)
-++..+...+|+...++.. .++-.|..||++.-.... +..+ ..-..++.|+|.-.. .++...|
T Consensus 101 ~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~d--- 177 (1405)
T KOG3630|consen 101 IPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSD--- 177 (1405)
T ss_pred ccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccc---
Confidence 3566677778876654442 234489999987521111 1111 122367778876532 3333333
Q ss_pred CeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCC--CCceeEEEEccCC
Q 014755 157 DYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYES--GLGVKSISWSPCG 234 (419)
Q Consensus 157 g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~~v~~~~~s~~~ 234 (419)
+.|++..+........--......++++|+|.|+.+++ +...|++.-|-...+....+..... ...|.++.|-...
T Consensus 178 lsl~V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~i--G~nnGt~vQy~P~leik~~ip~Pp~~e~yrvl~v~Wl~t~ 255 (1405)
T KOG3630|consen 178 LSLRVKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFI--GRNNGTEVQYEPSLEIKSEIPEPPVEENYRVLSVTWLSTQ 255 (1405)
T ss_pred cchhhhhhhhhhhhhcccCcccceeeEEeccccceeeE--ecCCCeEEEeecccceeecccCCCcCCCcceeEEEEecce
Confidence 56777665432221111123456899999999999999 6668999999987776665544322 2479999998877
Q ss_pred CeEEEEE
Q 014755 235 QFLAVGS 241 (419)
Q Consensus 235 ~~l~~~~ 241 (419)
.++++-+
T Consensus 256 eflvvy~ 262 (1405)
T KOG3630|consen 256 EFLVVYG 262 (1405)
T ss_pred eEEEEec
Confidence 7776543
No 439
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=95.03 E-value=0.64 Score=44.75 Aligned_cols=70 Identities=14% Similarity=0.268 Sum_probs=51.4
Q ss_pred ceEEEEEccCCeEEEEecCCCCceEEEeeccC----------CC----ceee------c--ccCCCeeEEEeCCCC---C
Q 014755 335 GIGLMSWSSDSQYICTRNDSMPTTLWIWDICR----------QE----PAAI------L--VQKDPIRAATWDPTC---T 389 (419)
Q Consensus 335 ~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~----------~~----~~~~------~--~~~~~v~~~~~s~~~---~ 389 (419)
.|..+.++|+|+++|..+. ..|.|-.+.. ++ +... + .+...|..+.|+|.+ .
T Consensus 86 ~v~~i~~n~~g~~lal~G~---~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~ 162 (717)
T PF10168_consen 86 EVHQISLNPTGSLLALVGP---RGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDS 162 (717)
T ss_pred eEEEEEECCCCCEEEEEcC---CcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCC
Confidence 5899999999999999887 4555555532 11 1111 0 244578999999975 6
Q ss_pred eEEEEeCCCcEEEeecCC
Q 014755 390 RLVLCTGSSHLYMWTPSG 407 (419)
Q Consensus 390 ~l~s~~~dg~i~vw~~~~ 407 (419)
.|+.-..|+++++||+..
T Consensus 163 ~l~vLtsdn~lR~y~~~~ 180 (717)
T PF10168_consen 163 HLVVLTSDNTLRLYDISD 180 (717)
T ss_pred eEEEEecCCEEEEEecCC
Confidence 888899999999999973
No 440
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=94.94 E-value=0.2 Score=27.82 Aligned_cols=39 Identities=15% Similarity=0.073 Sum_probs=28.5
Q ss_pred CCCCEEEEEe--CCeEEEEecCCCcEEEEeecCcceeEEEE
Q 014755 17 PNARYIAVAV--DYRLVVRDAHSFKVVQLFSCLDKISYIEW 55 (419)
Q Consensus 17 ~d~~~la~~~--~~~i~i~~~~~~~~~~~~~~~~~v~~~~~ 55 (419)
||+++|.++. ++.|.++|..+++.+..+.-......+.|
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg~~P~~i~~ 41 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVGGYPFGVAV 41 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECCCCCceEEe
Confidence 6888888876 67899999999888776654333445544
No 441
>PRK13684 Ycf48-like protein; Provisional
Probab=94.89 E-value=2.4 Score=37.01 Aligned_cols=151 Identities=13% Similarity=0.102 Sum_probs=83.4
Q ss_pred CccEeEEEECCCCCEEEEEecCCCeEEE-EEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCC
Q 014755 90 LAGIAYARWSPDSRHILTTSDFQLRLTV-WSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTW 167 (419)
Q Consensus 90 ~~~v~~~~~~~~~~~l~~~~~~~~~i~i-wd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~ 167 (419)
...+..+.+.|++.+++++.. + .+.. ++-....... .......+.++.+.++++.++++.. |.+++-..+.+
T Consensus 172 ~g~~~~i~~~~~g~~v~~g~~-G-~i~~s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg~~----G~~~~~s~d~G 245 (334)
T PRK13684 172 AGVVRNLRRSPDGKYVAVSSR-G-NFYSTWEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLARG----GQIRFNDPDDL 245 (334)
T ss_pred cceEEEEEECCCCeEEEEeCC-c-eEEEEcCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEecC----CEEEEccCCCC
Confidence 456889999999876655543 4 4432 2222122333 2334456789999999988777653 55543233333
Q ss_pred eEEEEEec----cccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEee-cCCCCceeEEEEccCCCeEEEEEe
Q 014755 168 EIMGVFAV----DTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQA-YESGLGVKSISWSPCGQFLAVGSY 242 (419)
Q Consensus 168 ~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~ 242 (419)
+.-..... ....+..+.+.|++..+++ ..+|.+..=.-.|+.-..... ..-....+.+.|..+++.+++ +.
T Consensus 246 ~sW~~~~~~~~~~~~~l~~v~~~~~~~~~~~---G~~G~v~~S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~ 321 (334)
T PRK13684 246 ESWSKPIIPEITNGYGYLDLAYRTPGEIWAG---GGNGTLLVSKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGFVL-GQ 321 (334)
T ss_pred CccccccCCccccccceeeEEEcCCCCEEEE---cCCCeEEEeCCCCCCCeECCcCCCCCcceEEEEEeCCCceEEE-CC
Confidence 32221111 1235778889998876665 335655542224444333321 111124777887777666554 44
Q ss_pred cCcEEEEE
Q 014755 243 DQTLRVLN 250 (419)
Q Consensus 243 d~~i~v~d 250 (419)
.|.|-.|+
T Consensus 322 ~G~il~~~ 329 (334)
T PRK13684 322 RGVLLRYV 329 (334)
T ss_pred CceEEEec
Confidence 67777665
No 442
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=94.83 E-value=0.16 Score=27.74 Aligned_cols=34 Identities=21% Similarity=0.382 Sum_probs=23.6
Q ss_pred eeecCCccEeEEEECCCCCEEEEEecCC--CeEEEE
Q 014755 85 KIDEGLAGIAYARWSPDSRHILTTSDFQ--LRLTVW 118 (419)
Q Consensus 85 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~--~~i~iw 118 (419)
++...........|+|||+.|+.++... |.-.||
T Consensus 3 ~~t~~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 3 QLTNSPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp EES-SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred CcccCCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 3445556678899999999999988655 455555
No 443
>KOG1520 consensus Predicted alkaloid synthase/Surface mucin Hemomucin [General function prediction only]
Probab=94.81 E-value=1.8 Score=37.40 Aligned_cols=119 Identities=9% Similarity=0.116 Sum_probs=64.8
Q ss_pred ccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCe-----eeEEEccCCCEEEEEeecCCCCeEEEEecc
Q 014755 91 AGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHAS-----KGVAFTQDGKFAAICTRRDCKDYINLLSCH 165 (419)
Q Consensus 91 ~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~ 165 (419)
+....++|...+..|+.+...- -+...+.+++....+..+.... ..+..+++|. |++=|..
T Consensus 115 GRPLGl~f~~~ggdL~VaDAYl-GL~~V~p~g~~a~~l~~~~~G~~~kf~N~ldI~~~g~-------------vyFTDSS 180 (376)
T KOG1520|consen 115 GRPLGIRFDKKGGDLYVADAYL-GLLKVGPEGGLAELLADEAEGKPFKFLNDLDIDPEGV-------------VYFTDSS 180 (376)
T ss_pred CCcceEEeccCCCeEEEEecce-eeEEECCCCCcceeccccccCeeeeecCceeEcCCCe-------------EEEeccc
Confidence 5567899999887777775543 2444455555533322222211 3444444333 3322221
Q ss_pred CCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEe
Q 014755 166 TWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSY 242 (419)
Q Consensus 166 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 242 (419)
+ .|.+..-.+++..+...|.+..||...+..+.+...-. -.+.++.|||+.+++.+-.
T Consensus 181 s-----------------k~~~rd~~~a~l~g~~~GRl~~YD~~tK~~~VLld~L~--F~NGlaLS~d~sfvl~~Et 238 (376)
T KOG1520|consen 181 S-----------------KYDRRDFVFAALEGDPTGRLFRYDPSTKVTKVLLDGLY--FPNGLALSPDGSFVLVAET 238 (376)
T ss_pred c-----------------ccchhheEEeeecCCCccceEEecCcccchhhhhhccc--ccccccCCCCCCEEEEEee
Confidence 1 11111223344445567888889985555444433222 5778999999999887743
No 444
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=94.76 E-value=2.3 Score=36.29 Aligned_cols=68 Identities=15% Similarity=0.251 Sum_probs=49.1
Q ss_pred eEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecccC-C-----CeeEEEeCCCCCeEEEEeCCCcEEEeec
Q 014755 336 IGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILVQK-D-----PIRAATWDPTCTRLVLCTGSSHLYMWTP 405 (419)
Q Consensus 336 v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~~~-~-----~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 405 (419)
++++...++|.+|++.-.- ..|.+.|-.+|+++..++-. . +-..++|-.|-+++-....++.|.++|=
T Consensus 146 iNsV~~~~~G~yLiS~R~~--~~i~~I~~~tG~I~W~lgG~~~~df~~~~~~f~~QHdar~~~~~~~~~~IslFDN 219 (299)
T PF14269_consen 146 INSVDKDDDGDYLISSRNT--STIYKIDPSTGKIIWRLGGKRNSDFTLPATNFSWQHDARFLNESNDDGTISLFDN 219 (299)
T ss_pred eeeeeecCCccEEEEeccc--CEEEEEECCCCcEEEEeCCCCCCcccccCCcEeeccCCEEeccCCCCCEEEEEcC
Confidence 7788888999999999876 89999999999998877422 1 1122455555556655566777777765
No 445
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=94.66 E-value=2.4 Score=36.00 Aligned_cols=69 Identities=14% Similarity=0.188 Sum_probs=44.0
Q ss_pred eEEEEEcc---CCeEEEEecCCCCceEEEeeccC-----CC---------ceeecccC-CCeeEEEeCCCCCeEEEEeCC
Q 014755 336 IGLMSWSS---DSQYICTRNDSMPTTLWIWDICR-----QE---------PAAILVQK-DPIRAATWDPTCTRLVLCTGS 397 (419)
Q Consensus 336 v~~~~~s~---~g~~l~~~~~d~~~~i~iwd~~~-----~~---------~~~~~~~~-~~v~~~~~s~~~~~l~s~~~d 397 (419)
+..++.+| +|++|....- ..-++|.+.+ .. .+..++.. .....++++++|.+..+--..
T Consensus 130 ~~gial~~~~~d~r~LYf~~l---ss~~ly~v~T~~L~~~~~~~~~~~~~~v~~lG~k~~~s~g~~~D~~G~ly~~~~~~ 206 (287)
T PF03022_consen 130 IFGIALSPISPDGRWLYFHPL---SSRKLYRVPTSVLRDPSLSDAQALASQVQDLGDKGSQSDGMAIDPNGNLYFTDVEQ 206 (287)
T ss_dssp EEEEEE-TTSTTS-EEEEEET---T-SEEEEEEHHHHCSTT--HHH-HHHT-EEEEE---SECEEEEETTTEEEEEECCC
T ss_pred ccccccCCCCCCccEEEEEeC---CCCcEEEEEHHHhhCccccccccccccceeccccCCCCceEEECCCCcEEEecCCC
Confidence 66777765 7888887754 2334444433 11 12333432 467788999999988888889
Q ss_pred CcEEEeecCC
Q 014755 398 SHLYMWTPSG 407 (419)
Q Consensus 398 g~i~vw~~~~ 407 (419)
+.|..|+..+
T Consensus 207 ~aI~~w~~~~ 216 (287)
T PF03022_consen 207 NAIGCWDPDG 216 (287)
T ss_dssp TEEEEEETTT
T ss_pred CeEEEEeCCC
Confidence 9999999986
No 446
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=94.66 E-value=0.22 Score=27.62 Aligned_cols=41 Identities=7% Similarity=-0.166 Sum_probs=29.4
Q ss_pred cCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEE
Q 014755 57 LDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARW 98 (419)
Q Consensus 57 ~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~ 98 (419)
|++++|+++....+.|.++|..+++.+..+.... ....++|
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg~-~P~~i~~ 41 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVGG-YPFGVAV 41 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECCC-CCceEEe
Confidence 6788888877666899999998888777765532 2334444
No 447
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=94.66 E-value=0.17 Score=28.12 Aligned_cols=31 Identities=10% Similarity=0.194 Sum_probs=26.1
Q ss_pred CCeeEEEeCCCCC---eEEEEeCCCcEEEeecCC
Q 014755 377 DPIRAATWDPTCT---RLVLCTGSSHLYMWTPSG 407 (419)
Q Consensus 377 ~~v~~~~~s~~~~---~l~s~~~dg~i~vw~~~~ 407 (419)
+.|+++.|||+.. +|+.+-.-|.|.|+|+.+
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 4689999998554 888888889999999984
No 448
>KOG2247 consensus WD40 repeat-containing protein [General function prediction only]
Probab=94.56 E-value=0.0043 Score=54.09 Aligned_cols=134 Identities=13% Similarity=0.201 Sum_probs=92.4
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeee-cCC
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKID-EGL 90 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~-~~~ 90 (419)
..|-|.+.-++.++ +..+..||-. ++.......++....++|..+++.++......+.+.+||+.+.... ++. +..
T Consensus 40 ~~w~~e~~nlavaca~tiv~~YD~a-gq~~le~n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytq-qLE~gg~ 117 (615)
T KOG2247|consen 40 HRWRPEGHNLAVACANTIVIYYDKA-GQVILELNPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQ-QLESGGT 117 (615)
T ss_pred eeEecCCCceehhhhhhHHHhhhhh-cceecccCCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHH-HHhccCc
Confidence 46788777777776 5557778754 3334444456677889999999988877666689999999765322 221 222
Q ss_pred ccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEecc-CCCCeeeEEEccCCCEEEE
Q 014755 91 AGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQS-PKHASKGVAFTQDGKFAAI 149 (419)
Q Consensus 91 ~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~ 149 (419)
..-.-+.|++....++.+-..+ .+.+++..+.+.....+ |..++.++++.+.+..+..
T Consensus 118 ~s~sll~wsKg~~el~ig~~~g-n~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~vil~ 176 (615)
T KOG2247|consen 118 SSKSLLAWSKGTPELVIGNNAG-NIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDYVILC 176 (615)
T ss_pred chHHHHhhccCCcccccccccc-ceEEEeccchhhhhhhcccccceeEEEecccceeeec
Confidence 2222378899888888886655 89999988766555444 7778888999887755443
No 449
>PRK13684 Ycf48-like protein; Provisional
Probab=94.52 E-value=3 Score=36.43 Aligned_cols=155 Identities=10% Similarity=0.068 Sum_probs=86.3
Q ss_pred ccceeeeeECCCCCeEEEEcCCCCceEEEE-cCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCce
Q 014755 177 TLDLADIEWSPDDSAIVIWDSPLEYKVLIY-SPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWK 255 (419)
Q Consensus 177 ~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~-d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~ 255 (419)
...+..+.+.|++.++++ ...|.++.- +..++........ ....++++.+.++++.++++. .|.+++=....+.
T Consensus 172 ~g~~~~i~~~~~g~~v~~---g~~G~i~~s~~~gg~tW~~~~~~-~~~~l~~i~~~~~g~~~~vg~-~G~~~~~s~d~G~ 246 (334)
T PRK13684 172 AGVVRNLRRSPDGKYVAV---SSRGNFYSTWEPGQTAWTPHQRN-SSRRLQSMGFQPDGNLWMLAR-GGQIRFNDPDDLE 246 (334)
T ss_pred cceEEEEEECCCCeEEEE---eCCceEEEEcCCCCCeEEEeeCC-CcccceeeeEcCCCCEEEEec-CCEEEEccCCCCC
Confidence 456888999999877766 334555432 3333333333222 223789999999998776654 5665432222222
Q ss_pred eeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcc
Q 014755 256 TFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQG 335 (419)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (419)
.-.....+. ......
T Consensus 247 sW~~~~~~~-----------------------------------------------------------------~~~~~~ 261 (334)
T PRK13684 247 SWSKPIIPE-----------------------------------------------------------------ITNGYG 261 (334)
T ss_pred ccccccCCc-----------------------------------------------------------------cccccc
Confidence 211111000 001123
Q ss_pred eEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec----ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 336 IGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL----VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 336 v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~----~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
+..+.+.|++..++++.. |.+.. ....++--... +-....+.+.|..+++.++ .+..|.|.-|+-.
T Consensus 262 l~~v~~~~~~~~~~~G~~---G~v~~-S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~G~il~~~~~ 331 (334)
T PRK13684 262 YLDLAYRTPGEIWAGGGN---GTLLV-SKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGFV-LGQRGVLLRYVGS 331 (334)
T ss_pred eeeEEEcCCCCEEEEcCC---CeEEE-eCCCCCCCeECCcCCCCCcceEEEEEeCCCceEE-ECCCceEEEecCC
Confidence 678899998887776654 65553 44444322221 1224577888887776655 5667888877643
No 450
>PLN02153 epithiospecifier protein
Probab=94.51 E-value=3.1 Score=36.54 Aligned_cols=151 Identities=11% Similarity=0.073 Sum_probs=74.8
Q ss_pred CCCEEEEEeC--------CeEEEEecCCCcEEEEeecC--cce---eEEEEecCCCeEEEEeccC----CeEEEEEccCC
Q 014755 18 NARYIAVAVD--------YRLVVRDAHSFKVVQLFSCL--DKI---SYIEWALDSEYILCGLYKR----LMIQAWSLTQP 80 (419)
Q Consensus 18 d~~~la~~~~--------~~i~i~~~~~~~~~~~~~~~--~~v---~~~~~s~~~~~l~~~~~~~----g~i~iw~~~~~ 80 (419)
+++++++|+. ..+.+||..+.+........ ... ......-+++.++.|+.+. ..+.+||+.+.
T Consensus 32 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~ 111 (341)
T PLN02153 32 GDKLYSFGGELKPNEHIDKDLYVFDFNTHTWSIAPANGDVPRISCLGVRMVAVGTKLYIFGGRDEKREFSDFYSYDTVKN 111 (341)
T ss_pred CCEEEEECCccCCCCceeCcEEEEECCCCEEEEcCccCCCCCCccCceEEEEECCEEEEECCCCCCCccCcEEEEECCCC
Confidence 4566666642 24778898876654432111 111 1111122466667776431 25788998877
Q ss_pred cceeeeec-----CCccEeEEEECCCCCEEEEEecCC----------CeEEEEEcCCCeEEEeccCC----CCe-eeEEE
Q 014755 81 EWTCKIDE-----GLAGIAYARWSPDSRHILTTSDFQ----------LRLTVWSLLNTACVHVQSPK----HAS-KGVAF 140 (419)
Q Consensus 81 ~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~~~----------~~i~iwd~~~~~~~~~~~~~----~~~-~~~~~ 140 (419)
++...-.. ........+..-+++.++.++.+. ..+.+||.++.+...+.... ... .+++
T Consensus 112 ~W~~~~~~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~l~~~~~~~~~r~~~~~~- 190 (341)
T PLN02153 112 EWTFLTKLDEEGGPEARTFHSMASDENHVYVFGGVSKGGLMKTPERFRTIEAYNIADGKWVQLPDPGENFEKRGGAGFA- 190 (341)
T ss_pred EEEEeccCCCCCCCCCceeeEEEEECCEEEEECCccCCCccCCCcccceEEEEECCCCeEeeCCCCCCCCCCCCcceEE-
Confidence 65422110 111111122223566666666431 15778999988776643221 111 2222
Q ss_pred ccCCCEEEEEeecC----------CCCeEEEEeccCCeE
Q 014755 141 TQDGKFAAICTRRD----------CKDYINLLSCHTWEI 169 (419)
Q Consensus 141 ~~~~~~l~~~~~~~----------~~g~v~i~d~~~~~~ 169 (419)
.-+++.++.++.+. ....+.+||+.+.+-
T Consensus 191 ~~~~~iyv~GG~~~~~~~gG~~~~~~~~v~~yd~~~~~W 229 (341)
T PLN02153 191 VVQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKW 229 (341)
T ss_pred EECCeEEEEeccccccccCCccceecCceEEEEcCCCcE
Confidence 23555555554320 014688899877543
No 451
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=94.51 E-value=1.6 Score=35.76 Aligned_cols=145 Identities=11% Similarity=0.070 Sum_probs=83.2
Q ss_pred eEEEEEcCCCeEEEeccCCC-CeeeEEEccCCCEEEEEeecCCCCeEEEEeccC------CeEEEEEeccccceeeeeEC
Q 014755 114 RLTVWSLLNTACVHVQSPKH-ASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT------WEIMGVFAVDTLDLADIEWS 186 (419)
Q Consensus 114 ~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~------~~~~~~~~~~~~~v~~~~~~ 186 (419)
.-.+||+.+++...+..... -..+-.+-+||+.+.+|+..++...+++++... +......-....+-..+..-
T Consensus 47 ~s~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L 126 (243)
T PF07250_consen 47 HSVEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTL 126 (243)
T ss_pred EEEEEecCCCcEEeccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceEC
Confidence 45589999987766433222 224556789999999998766566799988654 11111101112333445556
Q ss_pred CCCCeEEEEcCCCCceEEEEcCC--CceEEEEeec------CCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeee
Q 014755 187 PDDSAIVIWDSPLEYKVLIYSPD--GRCLLKYQAY------ESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFA 258 (419)
Q Consensus 187 ~~~~~l~~~~~~~~~~i~~~d~~--~~~~~~~~~~------~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~ 258 (419)
|||+.+++. +.......+|... ......+... .....--.+...|+|+.++.+..+ -.|||..+.+.++
T Consensus 127 ~DG~vlIvG-G~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~--s~i~d~~~n~v~~ 203 (243)
T PF07250_consen 127 PDGRVLIVG-GSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRG--SIIYDYKTNTVVR 203 (243)
T ss_pred CCCCEEEEe-CcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCC--cEEEeCCCCeEEe
Confidence 799988873 2333445555541 1111111100 011122356678999999888865 4567988887766
Q ss_pred eec
Q 014755 259 EFM 261 (419)
Q Consensus 259 ~~~ 261 (419)
.+.
T Consensus 204 ~lP 206 (243)
T PF07250_consen 204 TLP 206 (243)
T ss_pred eCC
Confidence 664
No 452
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=94.43 E-value=1 Score=43.39 Aligned_cols=34 Identities=18% Similarity=0.308 Sum_probs=27.9
Q ss_pred CCcceEEEEEccC---CeEEEEecCCCCceEEEeeccCC
Q 014755 332 PKQGIGLMSWSSD---SQYICTRNDSMPTTLWIWDICRQ 367 (419)
Q Consensus 332 ~~~~v~~~~~s~~---g~~l~~~~~d~~~~i~iwd~~~~ 367 (419)
+...|..+.|+|. +..|+.-..| +++|+||+...
T Consensus 145 ~~~~i~qv~WhP~s~~~~~l~vLtsd--n~lR~y~~~~~ 181 (717)
T PF10168_consen 145 SSLEIKQVRWHPWSESDSHLVVLTSD--NTLRLYDISDP 181 (717)
T ss_pred CCceEEEEEEcCCCCCCCeEEEEecC--CEEEEEecCCC
Confidence 4556899999986 4788888888 99999999763
No 453
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=94.41 E-value=2.8 Score=35.63 Aligned_cols=163 Identities=12% Similarity=0.052 Sum_probs=86.9
Q ss_pred eEEEEEccCCcceeeeecC------CccEeEEEECCCC-----CEEEEEecCCCeEEEEEcCCCeEEEeccCC-------
Q 014755 71 MIQAWSLTQPEWTCKIDEG------LAGIAYARWSPDS-----RHILTTSDFQLRLTVWSLLNTACVHVQSPK------- 132 (419)
Q Consensus 71 ~i~iw~~~~~~~~~~~~~~------~~~v~~~~~~~~~-----~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~------- 132 (419)
.|.+||+.+++.++++.-. .+.+..+.+.... .+++.+....+.|.++|+.+++..++..+.
T Consensus 35 KLv~~Dl~t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv~~~~~~~~p~~ 114 (287)
T PF03022_consen 35 KLVAFDLKTNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRVLHNSFSPDPDA 114 (287)
T ss_dssp EEEEEETTTTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEEETCGCTTS-SS
T ss_pred EEEEEECCCCcEEEEEECChHHcccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEEecCCcceeccc
Confidence 6888899888877665422 3457777776522 344445444448999999998877632221
Q ss_pred -------------CCeeeEEEcc---CCCEEEEEeecCCCCeEEEEeccC-----Ce---------EEEEEeccccceee
Q 014755 133 -------------HASKGVAFTQ---DGKFAAICTRRDCKDYINLLSCHT-----WE---------IMGVFAVDTLDLAD 182 (419)
Q Consensus 133 -------------~~~~~~~~~~---~~~~l~~~~~~~~~g~v~i~d~~~-----~~---------~~~~~~~~~~~v~~ 182 (419)
..+..++.+| +++.|....-. .-++|.+.+ .. .++.+-........
T Consensus 115 ~~~~i~g~~~~~~dg~~gial~~~~~d~r~LYf~~ls----s~~ly~v~T~~L~~~~~~~~~~~~~~v~~lG~k~~~s~g 190 (287)
T PF03022_consen 115 GPFTIGGESFQWPDGIFGIALSPISPDGRWLYFHPLS----SRKLYRVPTSVLRDPSLSDAQALASQVQDLGDKGSQSDG 190 (287)
T ss_dssp EEEEETTEEEEETTSEEEEEE-TTSTTS-EEEEEETT-----SEEEEEEHHHHCSTT--HHH-HHHT-EEEEE---SECE
T ss_pred cceeccCceEecCCCccccccCCCCCCccEEEEEeCC----CCcEEEEEHHHhhCccccccccccccceeccccCCCCce
Confidence 1234455544 55566655432 223333321 10 11111111135566
Q ss_pred eeECCCCCeEEEEcCCCCceEEEEcCCC----ceEEEEeecCC-CCceeEEEEcc--CCCeEEE
Q 014755 183 IEWSPDDSAIVIWDSPLEYKVLIYSPDG----RCLLKYQAYES-GLGVKSISWSP--CGQFLAV 239 (419)
Q Consensus 183 ~~~~~~~~~l~~~~~~~~~~i~~~d~~~----~~~~~~~~~~~-~~~v~~~~~s~--~~~~l~~ 239 (419)
+++.++|..++. .-..+.|..|+..+ +....+..... -..+.++.+.+ +|.+.+.
T Consensus 191 ~~~D~~G~ly~~--~~~~~aI~~w~~~~~~~~~~~~~l~~d~~~l~~pd~~~i~~~~~g~L~v~ 252 (287)
T PF03022_consen 191 MAIDPNGNLYFT--DVEQNAIGCWDPDGPYTPENFEILAQDPRTLQWPDGLKIDPEGDGYLWVL 252 (287)
T ss_dssp EEEETTTEEEEE--ECCCTEEEEEETTTSB-GCCEEEEEE-CC-GSSEEEEEE-T--TS-EEEE
T ss_pred EEECCCCcEEEe--cCCCCeEEEEeCCCCcCccchheeEEcCceeeccceeeeccccCceEEEE
Confidence 778887776655 45578999999955 23333332222 24678888888 6654443
No 454
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=94.27 E-value=0.34 Score=39.10 Aligned_cols=30 Identities=20% Similarity=0.066 Sum_probs=25.0
Q ss_pred EccCCCeEEEEEecCcEEEEEcCCceeeee
Q 014755 230 WSPCGQFLAVGSYDQTLRVLNHLTWKTFAE 259 (419)
Q Consensus 230 ~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~ 259 (419)
+..+++++++.+.+|.+++||+.+++.+..
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~ 47 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLP 47 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccC
Confidence 455788999999999999999998876543
No 455
>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2. Unpublished observations.
Probab=94.16 E-value=3.3 Score=35.54 Aligned_cols=232 Identities=10% Similarity=0.017 Sum_probs=119.2
Q ss_pred CCCCEEEEEeCCeEEEEecCC--CcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcc------------
Q 014755 17 PNARYIAVAVDYRLVVRDAHS--FKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEW------------ 82 (419)
Q Consensus 17 ~d~~~la~~~~~~i~i~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~------------ 82 (419)
-++++|+.|.+..+.+.+... .+..+.+ +...|+++...+.-+.|++-+.....++.+++..-..
T Consensus 11 ~~~~~lL~GTe~Gly~~~~~~~~~~~~kl~-~~~~v~q~~v~~~~~lLi~Lsgk~~~L~~~~L~~L~~~~~~~~~~~~~~ 89 (302)
T smart00036 11 CDGKWLLVGTEEGLYVLNISDQPGTLEKLI-GRRSVTQIWVLEENNVLLMISGKKPQLYSHPLSALVEKKEALGSARLVI 89 (302)
T ss_pred cCCcEEEEEeCCceEEEEcccCCCCeEEec-CcCceEEEEEEhhhCEEEEEeCCcceEEEEEHHHhhhhhhccCCccccc
Confidence 345789999988899888765 3455544 4668999999998888888774434599999843221
Q ss_pred ---eeeeecCCccEeEEEECCCCCEE-EEEecCCCeEEEEEcCCC--eEEEec-------cCCCCeeeEEEccC--CCEE
Q 014755 83 ---TCKIDEGLAGIAYARWSPDSRHI-LTTSDFQLRLTVWSLLNT--ACVHVQ-------SPKHASKGVAFTQD--GKFA 147 (419)
Q Consensus 83 ---~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~~~~i~iwd~~~~--~~~~~~-------~~~~~~~~~~~~~~--~~~l 147 (419)
......+...............+ +.++... +|.++..... +..... ....++..+..+++ ...+
T Consensus 90 ~~~~~~~~~~tkGc~~~~v~~~~~~~~l~~A~~~-~i~l~~~~~~~~~f~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l 168 (302)
T smart00036 90 RKNVLTKIPDTKGCHLCAVVNGKRSLFLCVALQS-SVVLLQWYNPLKKFKLFKSKFLFPLISPVPVFVELVSSSFERPGI 168 (302)
T ss_pred cccceEeCCcCCceEEEEEEcCCCcEEEEEEcCC-eEEEEEccChhhhhhhhcccccccCCCCccceEeeecccccceEE
Confidence 00111333333333333222222 2333333 6777654332 111111 11122233333333 4567
Q ss_pred EEEeecCCCCeEEEEeccC--CeEEE-----EEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCC-ceEEEEeec
Q 014755 148 AICTRRDCKDYINLLSCHT--WEIMG-----VFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDG-RCLLKYQAY 219 (419)
Q Consensus 148 ~~~~~~~~~g~v~i~d~~~--~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~-~~~~~~~~~ 219 (419)
++|+.. +...++++.. ..... ..........++..-+++.++++. +....+.|..| ...+.....
T Consensus 169 cvG~~~---~~~~~~~~~~~~~~~~d~sl~~~~~~~~~~p~~i~~l~~~e~Llc~----~~~~v~Vn~~G~~~~r~~~l~ 241 (302)
T smart00036 169 CIGSDK---GGGDVVQFHESLVSKEDLSLPFLSEETSLKPISVVQVPRDEFLLCY----DEFGVFVNLYGKRRSRNPILH 241 (302)
T ss_pred EEEEcC---CCCeEEEEeecccccccccccccccccccCceEEEEECCCeEEEEE----CcEEEEEeCCCCccccceEEE
Confidence 777653 1233333322 11000 000111023333334456666653 34566667666 332221111
Q ss_pred CCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeec
Q 014755 220 ESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 220 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 261 (419)
-...+.++++.. .+|+.-. +..|.++++.+++.++++.
T Consensus 242 -w~~~p~~~~~~~--pyll~~~-~~~ievr~l~~~~l~q~i~ 279 (302)
T smart00036 242 -WEFMPESFAYHS--PYLLAFH-DNGIEIRSIKTGELLQELA 279 (302)
T ss_pred -cCCcccEEEEEC--CEEEEEc-CCcEEEEECCCCceEEEEe
Confidence 112466777763 4666655 4569999999999888875
No 456
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=94.13 E-value=1.6 Score=31.62 Aligned_cols=73 Identities=14% Similarity=0.135 Sum_probs=48.7
Q ss_pred eEEEEEcc-----CCeEEEEecCCCCceEEEeeccCCCceeecccCCCeeEEEeC---CCCCeEEEEeCCCcEEEeecCC
Q 014755 336 IGLMSWSS-----DSQYICTRNDSMPTTLWIWDICRQEPAAILVQKDPIRAATWD---PTCTRLVLCTGSSHLYMWTPSG 407 (419)
Q Consensus 336 v~~~~~s~-----~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s---~~~~~l~s~~~dg~i~vw~~~~ 407 (419)
|++++-.+ +...|+.|+. ..+..||+....-+-...-...|+++.+- ....-|+..+.+..|.-||.++
T Consensus 50 italaaG~l~~~~~~D~LliGt~---t~llaYDV~~N~d~Fyke~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G 126 (136)
T PF14781_consen 50 ITALAAGRLKPDDGRDCLLIGTQ---TSLLAYDVENNSDLFYKEVPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEG 126 (136)
T ss_pred eEEEEEEecCCCCCcCEEEEecc---ceEEEEEcccCchhhhhhCccceeEEEEEecCCCCCcEEEECceEEEEEeCCCC
Confidence 55554433 3567888877 78999999987655444455677777663 2223455566677888888887
Q ss_pred CeEE
Q 014755 408 AYCV 411 (419)
Q Consensus 408 ~~~~ 411 (419)
.++.
T Consensus 127 ~e~f 130 (136)
T PF14781_consen 127 NEIF 130 (136)
T ss_pred cEEE
Confidence 7764
No 457
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=94.11 E-value=5.8 Score=38.16 Aligned_cols=140 Identities=18% Similarity=0.101 Sum_probs=83.4
Q ss_pred ccCeEEcCCCCEEEEEe-CC----eEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEecc-----CCe-------E
Q 014755 10 TGPSCFSPNARYIAVAV-DY----RLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYK-----RLM-------I 72 (419)
Q Consensus 10 ~~~~~~s~d~~~la~~~-~~----~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~-----~g~-------i 72 (419)
...+.|+|||+.++..+ ++ .+++.+.. + ....+...+....|+|+|+.++..... ++. +
T Consensus 62 ~~~~~~spdg~~~~~~~~~~~~~~~l~l~~~~-g---~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (620)
T COG1506 62 VSELRWSPDGSVLAFVSTDGGRVAQLYLVDVG-G---LITKTAFGVSDARWSPDGDRIAFLTAEGASKRDGGDHLFVDRL 137 (620)
T ss_pred ccccccCCCCCEEEEEeccCCCcceEEEEecC-C---ceeeeecccccceeCCCCCeEEEEecccccccCCceeeeeccc
Confidence 33478999999999987 33 24555555 3 333355678889999999988872110 121 3
Q ss_pred EEEEccCC-c-----------ceeeeecCCccEeEEEECCCCCEEEEEecCCC------eEEEEEcCCCeEEEeccCCCC
Q 014755 73 QAWSLTQP-E-----------WTCKIDEGLAGIAYARWSPDSRHILTTSDFQL------RLTVWSLLNTACVHVQSPKHA 134 (419)
Q Consensus 73 ~iw~~~~~-~-----------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~------~i~iwd~~~~~~~~~~~~~~~ 134 (419)
.+|....+ + ...........+....+.+++..++....+.. ...++...++...........
T Consensus 138 ~~~~~~~g~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (620)
T COG1506 138 PVWFDGRGGERSDLYVVDIESKLIKLGLGNLDVVSFATDGDGRLVASIRLDDDADPWVTNLYVLIEGNGELESLTPGEGS 217 (620)
T ss_pred ceeecCCCCcccceEEEccCcccccccCCCCceeeeeeCCCCceeEEeeeccccCCceEeeEEEecCCCceEEEcCCCce
Confidence 33333322 1 11122233445667777777777776653321 233333346666666666667
Q ss_pred eeeEEEccCCCEEEEEeec
Q 014755 135 SKGVAFTQDGKFAAICTRR 153 (419)
Q Consensus 135 ~~~~~~~~~~~~l~~~~~~ 153 (419)
+..+.+.++++.++..+..
T Consensus 218 ~~~~~~~~~gk~~~~~~~~ 236 (620)
T COG1506 218 ISKLAFDADGKSIALLGTE 236 (620)
T ss_pred eeeeeeCCCCCeeEEeccC
Confidence 8899999999866665543
No 458
>KOG1898 consensus Splicing factor 3b, subunit 3 [RNA processing and modification]
Probab=94.07 E-value=5.5 Score=39.37 Aligned_cols=175 Identities=9% Similarity=0.058 Sum_probs=101.3
Q ss_pred eEEEEEccCCcceeeeecCCc----cEeEEEECCCCC--EEEEEecC----------CCeEEEEEcC-CCeEEEe-ccCC
Q 014755 71 MIQAWSLTQPEWTCKIDEGLA----GIAYARWSPDSR--HILTTSDF----------QLRLTVWSLL-NTACVHV-QSPK 132 (419)
Q Consensus 71 ~i~iw~~~~~~~~~~~~~~~~----~v~~~~~~~~~~--~l~~~~~~----------~~~i~iwd~~-~~~~~~~-~~~~ 132 (419)
.|++.|..+++.+..+....+ .+..+.|+.... +++++... .+.++.|++- .|+.+.+ ....
T Consensus 854 ~I~~~d~~s~~~~~~~~l~~ne~a~~v~~~~fs~~~~~~~~~v~~~~~~~l~~~~~~~g~~ytyk~~~~g~~lellh~T~ 933 (1205)
T KOG1898|consen 854 SIRVFDPKSGKIICLVELGQNEAAFSVCAVDFSSSEYQPFVAVGVATTEQLDSKSISSGFVYTYKFVRNGDKLELLHKTE 933 (1205)
T ss_pred eEEEEcCCCCceEEEEeecCCcchhheeeeeeccCCCceEEEEEeeccccccccccCCCceEEEEEEecCceeeeeeccC
Confidence 478888887776655433322 366777766433 33443321 1245666543 3443332 1112
Q ss_pred CCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEec--cccceeeeeECCCCCeEEEEcCCCCceEEEEcCCC
Q 014755 133 HASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAV--DTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDG 210 (419)
Q Consensus 133 ~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~ 210 (419)
-+-.-.+..|-..+++++-. ..+++||+-..++++.... -...|..+.+ .+..+++.|....-....|+..+
T Consensus 934 ~~~~v~Ai~~f~~~~LagvG----~~l~~YdlG~K~lLRk~e~k~~p~~Is~iqt--~~~RI~VgD~qeSV~~~~y~~~~ 1007 (1205)
T KOG1898|consen 934 IPGPVGAICPFQGRVLAGVG----RFLRLYDLGKKKLLRKCELKFIPNRISSIQT--YGARIVVGDIQESVHFVRYRRED 1007 (1205)
T ss_pred CCccceEEeccCCEEEEecc----cEEEEeeCChHHHHhhhhhccCceEEEEEee--cceEEEEeeccceEEEEEEecCC
Confidence 22244566677767776665 4899999987666554332 2345666665 46778887665555666777777
Q ss_pred ceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcC
Q 014755 211 RCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHL 252 (419)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~ 252 (419)
+.+..+....-...|+++.+-. ...+|.+..=|.+.+..+.
T Consensus 1008 n~l~~fadD~~pR~Vt~~~~lD-~~tvagaDrfGNi~~vR~P 1048 (1205)
T KOG1898|consen 1008 NQLIVFADDPVPRHVTALELLD-YDTVAGADRFGNIAVVRIP 1048 (1205)
T ss_pred CeEEEEeCCCccceeeEEEEec-CCceeeccccCcEEEEECC
Confidence 7777776554444566665543 3456666666666665543
No 459
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=94.02 E-value=2.4 Score=33.33 Aligned_cols=169 Identities=11% Similarity=0.049 Sum_probs=90.0
Q ss_pred CCCEEEEEe---CCeEEEEecCCCcEEEEeecC-cceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccE
Q 014755 18 NARYIAVAV---DYRLVVRDAHSFKVVQLFSCL-DKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGI 93 (419)
Q Consensus 18 d~~~la~~~---~~~i~i~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v 93 (419)
+|.++.+.+ ...|++||+.+++......-. ..+..=-...-|.++..-...+|.-.++|.++-+++.++.- .+.-
T Consensus 55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~y-~GeG 133 (262)
T COG3823 55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFSY-EGEG 133 (262)
T ss_pred CCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhccccc-CCcc
Confidence 445555554 456999999999877643321 12221111222445555555568889999888776655532 2222
Q ss_pred eEEEECCCCCEEEEEecCCCeEEEEEcCCC---eEEEeccCCCCe---eeEEEccCCCEEEEEeecCCCCeEEEEeccCC
Q 014755 94 AYARWSPDSRHILTTSDFQLRLTVWSLLNT---ACVHVQSPKHAS---KGVAFTQDGKFAAICTRRDCKDYINLLSCHTW 167 (419)
Q Consensus 94 ~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~---~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~ 167 (419)
+.+ ..|++.|+.+.... .++.-|.++- ..+.......+| +.+.|- +|...|-.-.. ..|...+.++|
T Consensus 134 WgL--t~d~~~LimsdGsa-tL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~V-dG~lyANVw~t---~~I~rI~p~sG 206 (262)
T COG3823 134 WGL--TSDDKNLIMSDGSA-TLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWV-DGELYANVWQT---TRIARIDPDSG 206 (262)
T ss_pred eee--ecCCcceEeeCCce-EEEecCHHHhhhcceEEEEECCeecccccceeee-ccEEEEeeeee---cceEEEcCCCC
Confidence 333 45677777766555 7777776652 112222222222 333332 34333322222 24555566666
Q ss_pred eEEEEEec------------cccceeeeeECCCCCeEEE
Q 014755 168 EIMGVFAV------------DTLDLADIEWSPDDSAIVI 194 (419)
Q Consensus 168 ~~~~~~~~------------~~~~v~~~~~~~~~~~l~~ 194 (419)
+.+..+.. +..-.+.+++.|++..+++
T Consensus 207 rV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~i 245 (262)
T COG3823 207 RVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLI 245 (262)
T ss_pred cEEEEEEccCCchhcCccccccccccceeecCcCCeEEE
Confidence 65554432 2334677888888766655
No 460
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=94.01 E-value=5.1 Score=38.37 Aligned_cols=69 Identities=9% Similarity=0.065 Sum_probs=50.5
Q ss_pred ceEEEEEc--cCCeEEEEecCCCCceEEEeeccC--CCcee--ecccCCCeeEEEeCCCC---C---eEEEEeCCCcEEE
Q 014755 335 GIGLMSWS--SDSQYICTRNDSMPTTLWIWDICR--QEPAA--ILVQKDPIRAATWDPTC---T---RLVLCTGSSHLYM 402 (419)
Q Consensus 335 ~v~~~~~s--~~g~~l~~~~~d~~~~i~iwd~~~--~~~~~--~~~~~~~v~~~~~s~~~---~---~l~s~~~dg~i~v 402 (419)
.++.++++ ...++||+++.. ..|.||-... .+... ...|...|-+|+|-++. . .|++++-.|.+.+
T Consensus 165 SaWGLdIh~~~~~rlIAVSsNs--~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~ 242 (717)
T PF08728_consen 165 SAWGLDIHDYKKSRLIAVSSNS--QEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWT 242 (717)
T ss_pred ceeEEEEEecCcceEEEEecCC--ceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEE
Confidence 47888998 788899999887 7777775544 22221 22366778999997654 2 7888899999999
Q ss_pred eec
Q 014755 403 WTP 405 (419)
Q Consensus 403 w~~ 405 (419)
|++
T Consensus 243 ~~I 245 (717)
T PF08728_consen 243 FKI 245 (717)
T ss_pred EEE
Confidence 888
No 461
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=94.00 E-value=0.63 Score=40.87 Aligned_cols=153 Identities=10% Similarity=0.074 Sum_probs=86.1
Q ss_pred cCeEEcCCCCEEEEEeCCeEEEEecCCCcEE--EEeec-Cc----cee-EEEEecCCCeEEEEeccCCeEEEE-EccCCc
Q 014755 11 GPSCFSPNARYIAVAVDYRLVVRDAHSFKVV--QLFSC-LD----KIS-YIEWALDSEYILCGLYKRLMIQAW-SLTQPE 81 (419)
Q Consensus 11 ~~~~~s~d~~~la~~~~~~i~i~~~~~~~~~--~~~~~-~~----~v~-~~~~s~~~~~l~~~~~~~g~i~iw-~~~~~~ 81 (419)
..+-+.|||+.|..-+...+.++++.+.... +.... .+ .|+ .+..-..|..|+++..| |.|.-| |...+.
T Consensus 224 ~qllL~Pdg~~LYv~~g~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~d-G~vsQWFdvr~~~ 302 (733)
T COG4590 224 SQLLLTPDGKTLYVRTGSELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHED-GLVSQWFDVRRDG 302 (733)
T ss_pred HhhEECCCCCEEEEecCCeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCC-CceeeeeeeecCC
Confidence 3367899999999998888888887654322 11111 11 122 22223356667777766 777665 544332
Q ss_pred ce-----eeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCC
Q 014755 82 WT-----CKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCK 156 (419)
Q Consensus 82 ~~-----~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 156 (419)
.. +.+.-...++..+.--.+.+-+++-...+ ++.++.-...+...+...-.....+++||.+.++++-..
T Consensus 303 ~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G-~L~~f~st~~~~lL~~~~~~~~~~~~~Sp~~~~Ll~e~~---- 377 (733)
T COG4590 303 QPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNG-TLQSFYSTSEKLLLFERAYQAPQLVAMSPNQAYLLSEDQ---- 377 (733)
T ss_pred CCcceeeeccccCcccceeeccccccceEEEEcCCC-ceeeeecccCcceehhhhhcCcceeeeCcccchheeecC----
Confidence 11 11111112233222222233344445544 777776555554443333446678999999999887543
Q ss_pred CeEEEEeccCCeE
Q 014755 157 DYINLLSCHTWEI 169 (419)
Q Consensus 157 g~v~i~d~~~~~~ 169 (419)
|.++++.+++..+
T Consensus 378 gki~~~~l~Nr~P 390 (733)
T COG4590 378 GKIRLAQLENRNP 390 (733)
T ss_pred CceEEEEecCCCC
Confidence 6899988876443
No 462
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=93.99 E-value=0.17 Score=44.25 Aligned_cols=164 Identities=10% Similarity=-0.000 Sum_probs=89.5
Q ss_pred ceeEEEEccCCCeEEEEEecCcEEEEEcCCceeee-eec--ccccccCCCccceeccCCCcccccceeeeccCccccccc
Q 014755 224 GVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFA-EFM--HLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNS 300 (419)
Q Consensus 224 ~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (419)
.+..+-..|||+.++.-+. ..+.++++.+..... .+. .+..... .-...+..-.++.....
T Consensus 222 ~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~---------------~Vte~l~lL~Gg~SLLv 285 (733)
T COG4590 222 DVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRH---------------QVTEQLYLLSGGFSLLV 285 (733)
T ss_pred chHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHH---------------HHHHHHHHHhCceeEEE
Confidence 6788899999998887765 578888876543211 111 0110000 00001111223333444
Q ss_pred cccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecccCCCee
Q 014755 301 DATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILVQKDPIR 380 (419)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~~~~~v~ 380 (419)
...+|....++++..... +.......+.-...++..+.-..+.+-+++-... |++.++.....+.+-...-...+.
T Consensus 286 ~~~dG~vsQWFdvr~~~~--p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~--G~L~~f~st~~~~lL~~~~~~~~~ 361 (733)
T COG4590 286 VHEDGLVSQWFDVRRDGQ--PHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRN--GTLQSFYSTSEKLLLFERAYQAPQ 361 (733)
T ss_pred EcCCCceeeeeeeecCCC--CcceeeeccccCcccceeeccccccceEEEEcCC--CceeeeecccCcceehhhhhcCcc
Confidence 455666777777665433 2222222222222233333323334455666665 888887765555443333444677
Q ss_pred EEEeCCCCCeEEEEeCCCcEEEeecCCC
Q 014755 381 AATWDPTCTRLVLCTGSSHLYMWTPSGA 408 (419)
Q Consensus 381 ~~~~s~~~~~l~s~~~dg~i~vw~~~~~ 408 (419)
-+++||.+.+|++- +.|.++++.+++.
T Consensus 362 ~~~~Sp~~~~Ll~e-~~gki~~~~l~Nr 388 (733)
T COG4590 362 LVAMSPNQAYLLSE-DQGKIRLAQLENR 388 (733)
T ss_pred eeeeCcccchheee-cCCceEEEEecCC
Confidence 78999999998854 4578999988754
No 463
>KOG1983 consensus Tomosyn and related SNARE-interacting proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=93.93 E-value=4.4 Score=41.05 Aligned_cols=77 Identities=9% Similarity=-0.052 Sum_probs=48.5
Q ss_pred CCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeE
Q 014755 331 NPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYC 410 (419)
Q Consensus 331 ~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~ 410 (419)
.+..++.+..+......+..+.. +.+-+|+.........+ .+....+++++..++++-.||.+.+||...+++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~v~~h~Dgs~~fWd~s~g~~ 268 (993)
T KOG1983|consen 196 LIEYESLQVLYYSPTKILIGFNR---GLVVIKDRASKYVQSAY----LPNGQLESRDGSHFVSYHTDGSYAFWDVSSGKL 268 (993)
T ss_pred ccccccceeeeecCCCcceeeee---eeeeehhcccccchhhc----ccccccCccCCceEEEEEecCCEEeeecCCCce
Confidence 34555566655555454444443 67777776554333322 122222288999999999999999999998876
Q ss_pred EecC
Q 014755 411 VSNP 414 (419)
Q Consensus 411 ~~~~ 414 (419)
...+
T Consensus 269 ~~~~ 272 (993)
T KOG1983|consen 269 QIAR 272 (993)
T ss_pred eecC
Confidence 4443
No 464
>KOG2247 consensus WD40 repeat-containing protein [General function prediction only]
Probab=93.79 E-value=0.0077 Score=52.60 Aligned_cols=138 Identities=9% Similarity=0.093 Sum_probs=95.6
Q ss_pred eeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEec
Q 014755 50 ISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQ 129 (419)
Q Consensus 50 v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~ 129 (419)
.....|-|.+.-++.++.+ ..+..||-. ++....+ ..++....++|..++..++......+.+.+||+.+.....+.
T Consensus 37 pi~~~w~~e~~nlavaca~-tiv~~YD~a-gq~~le~-n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE 113 (615)
T KOG2247|consen 37 PIIHRWRPEGHNLAVACAN-TIVIYYDKA-GQVILEL-NPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLE 113 (615)
T ss_pred cceeeEecCCCceehhhhh-hHHHhhhhh-cceeccc-CCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHh
Confidence 3455677877778888776 578888854 3332222 234456778898888888777666669999999876555533
Q ss_pred cCC-CCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEE
Q 014755 130 SPK-HASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIV 193 (419)
Q Consensus 130 ~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 193 (419)
... ..-.-+.|++....++.+... |.+.+++..+.+.+...-.|...+.++++.+.+..+.
T Consensus 114 ~gg~~s~sll~wsKg~~el~ig~~~---gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~vil 175 (615)
T KOG2247|consen 114 SGGTSSKSLLAWSKGTPELVIGNNA---GNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDYVIL 175 (615)
T ss_pred ccCcchHHHHhhccCCccccccccc---cceEEEeccchhhhhhhcccccceeEEEecccceeee
Confidence 222 222347788888888888653 8999999887666655555777888888888776554
No 465
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=93.76 E-value=4.3 Score=35.37 Aligned_cols=75 Identities=21% Similarity=0.167 Sum_probs=44.4
Q ss_pred CCcceEEEEEccCCeEEEEecCCC---Cc--e-------EEEe--eccC-CCcee----ecc------cCCCeeEEEeCC
Q 014755 332 PKQGIGLMSWSSDSQYICTRNDSM---PT--T-------LWIW--DICR-QEPAA----ILV------QKDPIRAATWDP 386 (419)
Q Consensus 332 ~~~~v~~~~~s~~g~~l~~~~~d~---~~--~-------i~iw--d~~~-~~~~~----~~~------~~~~v~~~~~s~ 386 (419)
....+..++++|||+.|.++.+.. ++ . ++|+ |..+ ++... .+. ....|+.+.+-+
T Consensus 145 ~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~ 224 (326)
T PF13449_consen 145 NNRGFEGLAVSPDGRTLFAAMESPLKQDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALP 224 (326)
T ss_pred CCCCeEEEEECCCCCEEEEEECccccCCCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEEC
Confidence 455688999999999666654320 11 1 4554 4444 22221 111 346789999999
Q ss_pred CCCeEEEEeC-----CCcEEEeecC
Q 014755 387 TCTRLVLCTG-----SSHLYMWTPS 406 (419)
Q Consensus 387 ~~~~l~s~~~-----dg~i~vw~~~ 406 (419)
++++|+.--. ...++|+.+.
T Consensus 225 d~~lLvLER~~~~~~~~~~ri~~v~ 249 (326)
T PF13449_consen 225 DGRLLVLERDFSPGTGNYKRIYRVD 249 (326)
T ss_pred CCcEEEEEccCCCCccceEEEEEEE
Confidence 9997764322 3456666554
No 466
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=93.62 E-value=2 Score=31.10 Aligned_cols=107 Identities=6% Similarity=-0.048 Sum_probs=67.3
Q ss_pred EEEecCCCeEEEEeccCCeEEEEEccCCc--------ceeeeecCCccEeEEEECC-----CCCEEEEEecCCCeEEEEE
Q 014755 53 IEWALDSEYILCGLYKRLMIQAWSLTQPE--------WTCKIDEGLAGIAYARWSP-----DSRHILTTSDFQLRLTVWS 119 (419)
Q Consensus 53 ~~~s~~~~~l~~~~~~~g~i~iw~~~~~~--------~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~~~~~i~iwd 119 (419)
-.|......|++++.- |.|.|.+..... .+ .+..-...|++++-.+ +...|+.++.. .+..||
T Consensus 4 GkfDG~~pcL~~aT~~-gKV~IH~ph~~~~~~~~~~~~i-~~LNin~~italaaG~l~~~~~~D~LliGt~t--~llaYD 79 (136)
T PF14781_consen 4 GKFDGVHPCLACATTG-GKVFIHNPHERGQRTGRQDSDI-SFLNINQEITALAAGRLKPDDGRDCLLIGTQT--SLLAYD 79 (136)
T ss_pred EEeCCCceeEEEEecC-CEEEEECCCccccccccccCce-eEEECCCceEEEEEEecCCCCCcCEEEEeccc--eEEEEE
Confidence 3455566677777765 799999876442 22 2223445667665433 34556666654 799999
Q ss_pred cCCCeEEEeccCCCCeeeEEEcc----CCCEEEEEeecCCCCeEEEEeccCC
Q 014755 120 LLNTACVHVQSPKHASKGVAFTQ----DGKFAAICTRRDCKDYINLLSCHTW 167 (419)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~~~~g~v~i~d~~~~ 167 (419)
+....-+.....+..+.++.+-. +...+++|+. -.|.-||....
T Consensus 80 V~~N~d~Fyke~~DGvn~i~~g~~~~~~~~l~ivGGn----csi~Gfd~~G~ 127 (136)
T PF14781_consen 80 VENNSDLFYKEVPDGVNAIVIGKLGDIPSPLVIVGGN----CSIQGFDYEGN 127 (136)
T ss_pred cccCchhhhhhCccceeEEEEEecCCCCCcEEEECce----EEEEEeCCCCc
Confidence 99988777777778888877733 2345555543 36666665543
No 467
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=93.29 E-value=8 Score=37.11 Aligned_cols=147 Identities=15% Similarity=0.069 Sum_probs=83.6
Q ss_pred eEEcCCCCEEEEEeCCeEEEEecCCCcEEE-------Ee----------------ecCcceeEEEEec-CCCeEEEEecc
Q 014755 13 SCFSPNARYIAVAVDYRLVVRDAHSFKVVQ-------LF----------------SCLDKISYIEWAL-DSEYILCGLYK 68 (419)
Q Consensus 13 ~~~s~d~~~la~~~~~~i~i~~~~~~~~~~-------~~----------------~~~~~v~~~~~s~-~~~~l~~~~~~ 68 (419)
.+.+. +.+|.+|..+.|.||+........ .. .....|+.|.... .+.-++..+.|
T Consensus 44 talsq-~n~LFiA~~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~~~~~D~~~s~~p~PHtIN~i~v~~lg~~EVLl~c~D 122 (717)
T PF08728_consen 44 TALSQ-RNLLFIAYQSEIYVYDPDGLTQLPSRKPCLRFDTKPEFTSTPDRLISTWPFPHTINFIKVGDLGGEEVLLLCTD 122 (717)
T ss_pred eEEec-CCEEEEEECCEEEEEecCCcccccccccccccccCccccccccccccCCCCCceeeEEEecccCCeeEEEEEec
Confidence 45555 889999999999999876432211 00 0112345554443 23334444446
Q ss_pred CCeEEEEEccCC-----------cc--------eeeeecCCccEeEEEEC--CCCCEEEEEecCCCeEEEEEcCCC--eE
Q 014755 69 RLMIQAWSLTQP-----------EW--------TCKIDEGLAGIAYARWS--PDSRHILTTSDFQLRLTVWSLLNT--AC 125 (419)
Q Consensus 69 ~g~i~iw~~~~~-----------~~--------~~~~~~~~~~v~~~~~~--~~~~~l~~~~~~~~~i~iwd~~~~--~~ 125 (419)
+|.|.+|..++- +. ..-...-....+++++. ...+.||++++.. .|.||-.... +.
T Consensus 123 dG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAVSsNs~-~VTVFaf~l~~~r~ 201 (717)
T PF08728_consen 123 DGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIAVSSNSQ-EVTVFAFALVDERF 201 (717)
T ss_pred CCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEEEecCCc-eEEEEEEecccccc
Confidence 799999976311 00 00011123467888887 6666666666554 7888765442 11
Q ss_pred EE--eccCCCCeeeEEEccCC---C---EEEEEeecCCCCeEEEEec
Q 014755 126 VH--VQSPKHASKGVAFTQDG---K---FAAICTRRDCKDYINLLSC 164 (419)
Q Consensus 126 ~~--~~~~~~~~~~~~~~~~~---~---~l~~~~~~~~~g~v~i~d~ 164 (419)
.. -..+.+.|.+++|-++. . .+++++-. |.+.+|++
T Consensus 202 ~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~---G~v~~~~I 245 (717)
T PF08728_consen 202 YHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDIS---GEVWTFKI 245 (717)
T ss_pred ccccccccccCCCeeEeecCCCCCccceEEEEEecc---CcEEEEEE
Confidence 11 12356678899997654 2 55555554 78888777
No 468
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=93.23 E-value=7.5 Score=36.56 Aligned_cols=57 Identities=18% Similarity=0.244 Sum_probs=40.5
Q ss_pred CeEEcCCCCEEEEEeCC------eEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccC
Q 014755 12 PSCFSPNARYIAVAVDY------RLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKR 69 (419)
Q Consensus 12 ~~~~s~d~~~la~~~~~------~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~ 69 (419)
.++.|||.+++|.+-|. ++++.|+.+++.+...- .+...+.+|.+|++.+.....++
T Consensus 133 ~~~~s~D~~~la~s~D~~G~e~y~lr~kdL~tg~~~~d~i-~~~~~~~~Wa~d~~~lfYt~~d~ 195 (682)
T COG1770 133 AASISPDHNLLAYSVDVLGDEQYTLRFKDLATGEELPDEI-TNTSGSFAWAADGKTLFYTRLDE 195 (682)
T ss_pred eeeeCCCCceEEEEEecccccEEEEEEEecccccccchhh-cccccceEEecCCCeEEEEEEcC
Confidence 37899999999998532 38899999987654221 22356778888888777766553
No 469
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=93.04 E-value=8 Score=36.38 Aligned_cols=118 Identities=14% Similarity=0.080 Sum_probs=73.0
Q ss_pred ceeEEEEecCCCeEEEEeccC----CeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCC--eEEEEE--c
Q 014755 49 KISYIEWALDSEYILCGLYKR----LMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQL--RLTVWS--L 120 (419)
Q Consensus 49 ~v~~~~~s~~~~~l~~~~~~~----g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~--~i~iwd--~ 120 (419)
.+-.++.|||.+++|.+-... -++++-|+.+++..... -.+....++|.+|++.++....+.+ .=++|- +
T Consensus 130 ~Lg~~~~s~D~~~la~s~D~~G~e~y~lr~kdL~tg~~~~d~--i~~~~~~~~Wa~d~~~lfYt~~d~~~rp~kv~~h~~ 207 (682)
T COG1770 130 SLGAASISPDHNLLAYSVDVLGDEQYTLRFKDLATGEELPDE--ITNTSGSFAWAADGKTLFYTRLDENHRPDKVWRHRL 207 (682)
T ss_pred eeeeeeeCCCCceEEEEEecccccEEEEEEEecccccccchh--hcccccceEEecCCCeEEEEEEcCCCCcceEEEEec
Confidence 466788999999999765332 37899999999765332 2234567899999999888765432 123333 3
Q ss_pred CC--CeEEEeccCCCCe--eeEEEccCCCEEEEEeecCCCCeEEEEeccCCe
Q 014755 121 LN--TACVHVQSPKHAS--KGVAFTQDGKFAAICTRRDCKDYINLLSCHTWE 168 (419)
Q Consensus 121 ~~--~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~ 168 (419)
.+ ..-..+...+... .++.-+...++|+....+.....+++.+.+...
T Consensus 208 gt~~~~d~lvyeE~d~~f~~~v~~s~s~~yi~i~~~~~~tsE~~ll~a~~p~ 259 (682)
T COG1770 208 GTPGSSDELVYEEKDDRFFLSVGRSRSEAYIVISLGSHITSEVRLLDADDPE 259 (682)
T ss_pred CCCCCcceEEEEcCCCcEEEEeeeccCCceEEEEcCCCcceeEEEEecCCCC
Confidence 33 1111122222222 444445666788777665555678888887643
No 470
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=93.01 E-value=1.3 Score=43.00 Aligned_cols=91 Identities=11% Similarity=0.064 Sum_probs=65.9
Q ss_pred EEEEEecCCCeEEEEEcCCCeEEEe-ccCCCCeeeEEEccCCCEEEE-EeecC--CCCeEEEEeccC-CeEEEEEecccc
Q 014755 104 HILTTSDFQLRLTVWSLLNTACVHV-QSPKHASKGVAFTQDGKFAAI-CTRRD--CKDYINLLSCHT-WEIMGVFAVDTL 178 (419)
Q Consensus 104 ~l~~~~~~~~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~-~~~~~--~~g~v~i~d~~~-~~~~~~~~~~~~ 178 (419)
.|+......+.|.+-|........+ ......+.+.+|||||+.|+. .+..+ +.-.|++-|+++ +.-+..+.....
T Consensus 320 kiAfv~~~~~~L~~~D~dG~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl~ve~a 399 (912)
T TIGR02171 320 KLAFRNDVTGNLAYIDYTKGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKLPVENA 399 (912)
T ss_pred eEEEEEcCCCeEEEEecCCCCceEEEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceEeecccc
Confidence 4555554334888889888777665 667788899999999999999 55543 344699999987 334455666677
Q ss_pred ceeeeeECCCCCeEEE
Q 014755 179 DLADIEWSPDDSAIVI 194 (419)
Q Consensus 179 ~v~~~~~~~~~~~l~~ 194 (419)
.|..-...++|...++
T Consensus 400 aiprwrv~e~gdt~iv 415 (912)
T TIGR02171 400 AIPRWRVLENGDTVIV 415 (912)
T ss_pred cccceEecCCCCeEEE
Confidence 7777778888877665
No 471
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=92.88 E-value=5.1 Score=33.71 Aligned_cols=66 Identities=9% Similarity=0.078 Sum_probs=43.8
Q ss_pred cCCeEEEEecCCCCceEEEeeccCCCceeecc---cCCCeeEEEeCC------CCCeEEEEeCCCcEEEeecCCCeEE
Q 014755 343 SDSQYICTRNDSMPTTLWIWDICRQEPAAILV---QKDPIRAATWDP------TCTRLVLCTGSSHLYMWTPSGAYCV 411 (419)
Q Consensus 343 ~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~---~~~~v~~~~~s~------~~~~l~s~~~dg~i~vw~~~~~~~~ 411 (419)
++++.=+.|..- |.|-+||+. +++++.+. .-...+.|+..| .+.+|+---.||+|..+|..+++.+
T Consensus 210 ~~~~d~v~G~G~--G~VdvFd~~-G~l~~r~as~g~LNaPWG~a~APa~FG~~sg~lLVGNFGDG~InaFD~~sG~~~ 284 (336)
T TIGR03118 210 ADRNDEVAGAGL--GYVNVFTLN-GQLLRRVASSGRLNAPWGLAIAPESFGSLSGALLVGNFGDGTINAYDPQSGAQL 284 (336)
T ss_pred CcccccccCCCc--ceEEEEcCC-CcEEEEeccCCcccCCceeeeChhhhCCCCCCeEEeecCCceeEEecCCCCcee
Confidence 444333344444 889999976 56655553 444567777755 4567776667999999999876644
No 472
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=92.60 E-value=5.4 Score=33.30 Aligned_cols=194 Identities=12% Similarity=0.150 Sum_probs=106.5
Q ss_pred eecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCC
Q 014755 44 FSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNT 123 (419)
Q Consensus 44 ~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~ 123 (419)
..-.+.+..+.++.+ +...+..+ .-++|.|+.+......+..-.-.-..-.|.-.|++..++.-+. -+.+.|+.+.
T Consensus 83 i~~~~l~~Dv~vse~--yvyvad~s-sGL~IvDIS~P~sP~~~~~lnt~gyaygv~vsGn~aYVadldd-gfLivdvsdp 158 (370)
T COG5276 83 INARDLFADVRVSEE--YVYVADWS-SGLRIVDISTPDSPTLIGFLNTDGYAYGVYVSGNYAYVADLDD-GFLIVDVSDP 158 (370)
T ss_pred EehhhhhheeEeccc--EEEEEcCC-CceEEEeccCCCCcceeccccCCceEEEEEecCCEEEEeeccC-cEEEEECCCC
Confidence 334566777888844 66666555 4699999988766544432222112333445688888887555 5778898874
Q ss_pred eEEE----eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeE---EEEEeccccceeeeeECCCCCeEEEEc
Q 014755 124 ACVH----VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEI---MGVFAVDTLDLADIEWSPDDSAIVIWD 196 (419)
Q Consensus 124 ~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~ 196 (419)
+... ..........++.| |++...+..+ +-+.+.|+..... +..... ...++++..+++..+++..
T Consensus 159 ssP~lagrya~~~~d~~~v~IS--Gn~AYvA~~d---~GL~ivDVSnp~sPvli~~~n~-g~g~~sv~vsdnr~y~vvy- 231 (370)
T COG5276 159 SSPQLAGRYALPGGDTHDVAIS--GNYAYVAWRD---GGLTIVDVSNPHSPVLIGSYNT-GPGTYSVSVSDNRAYLVVY- 231 (370)
T ss_pred CCceeeeeeccCCCCceeEEEe--cCeEEEEEeC---CCeEEEEccCCCCCeEEEEEec-CCceEEEEecCCeeEEEEc-
Confidence 4332 23333333566666 5566666665 6788888876432 222222 2267888888877777663
Q ss_pred CCCCceEEEEcCCCce-EEEEeecCCCCceeEE-EEccCCCeEEEEEecCcEEEEEcC
Q 014755 197 SPLEYKVLIYSPDGRC-LLKYQAYESGLGVKSI-SWSPCGQFLAVGSYDQTLRVLNHL 252 (419)
Q Consensus 197 ~~~~~~i~~~d~~~~~-~~~~~~~~~~~~v~~~-~~s~~~~~l~~~~~d~~i~v~d~~ 252 (419)
+..+.+-|.++.. ...+...+.. .+.++ .+.-.+++......+.-+.+-|+.
T Consensus 232 ---~egvlivd~s~~ssp~~~gsyet~-~p~~~s~v~Vs~~~~Yvadga~gl~~idis 285 (370)
T COG5276 232 ---DEGVLIVDVSGPSSPTVFGSYETS-NPVSISTVPVSGEYAYVADGAKGLPIIDIS 285 (370)
T ss_pred ---ccceEEEecCCCCCceEeeccccC-CcccccceecccceeeeeccccCceeEecc
Confidence 2345666663322 2222111111 12222 222234555555555555555543
No 473
>KOG3616 consensus Selective LIM binding factor [Transcription]
Probab=92.60 E-value=7.6 Score=36.95 Aligned_cols=72 Identities=18% Similarity=0.279 Sum_probs=48.4
Q ss_pred CCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecccCCCeeEEEeCCCCCeEEEEeCCCcEEEe-ecC
Q 014755 329 KPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCTRLVLCTGSSHLYMW-TPS 406 (419)
Q Consensus 329 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw-~~~ 406 (419)
+..|.+.|--+.+...+..|..-... -.+.++|+.+.+...++. ..+-+.|-|-+..++.-+.|. +.|| +++
T Consensus 333 ~inh~~~vdwielne~~~kllfrdkk--~kl~l~di~s~qksmiln---fcsymqwvp~sdvivaqn~dn-l~iwyn~d 405 (1636)
T KOG3616|consen 333 FINHEGAVDWIELNERAHKLLFRDKK--LKLHLVDIESCQKSMILN---FCSYMQWVPGSDVIVAQNGDN-LCIWYNID 405 (1636)
T ss_pred cccccccccceeccchhhhhhccccc--ceeEEEEcccchHHHHHH---HhhhheeccCcceEEecCCCc-eEEEecCC
Confidence 34577777777777777777777665 788999998765443332 123467888888887776665 4554 544
No 474
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=92.58 E-value=1.3 Score=43.07 Aligned_cols=87 Identities=11% Similarity=-0.033 Sum_probs=61.9
Q ss_pred CEEEEEeC--CeEEEEecCCCcEEEE-eecCcceeEEEEecCCCeEEE-EeccC----CeEEEEEccCC-cceeeeecCC
Q 014755 20 RYIAVAVD--YRLVVRDAHSFKVVQL-FSCLDKISYIEWALDSEYILC-GLYKR----LMIQAWSLTQP-EWTCKIDEGL 90 (419)
Q Consensus 20 ~~la~~~~--~~i~i~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~-~~~~~----g~i~iw~~~~~-~~~~~~~~~~ 90 (419)
..||+..+ +.|.+-|......... +.+..+|.+.+|||||+.|+. .+.+. ..|++-++.+. .-+.++.-..
T Consensus 319 tkiAfv~~~~~~L~~~D~dG~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl~ve~ 398 (912)
T TIGR02171 319 AKLAFRNDVTGNLAYIDYTKGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKLPVEN 398 (912)
T ss_pred eeEEEEEcCCCeEEEEecCCCCceEEEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceEeeccc
Confidence 34666653 5788889888777766 788999999999999999998 44432 25888888654 3334555556
Q ss_pred ccEeEEEECCCCCEEE
Q 014755 91 AGIAYARWSPDSRHIL 106 (419)
Q Consensus 91 ~~v~~~~~~~~~~~l~ 106 (419)
..|..-...++|...+
T Consensus 399 aaiprwrv~e~gdt~i 414 (912)
T TIGR02171 399 AAIPRWRVLENGDTVI 414 (912)
T ss_pred ccccceEecCCCCeEE
Confidence 6677777777776544
No 475
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=92.52 E-value=0.11 Score=49.28 Aligned_cols=64 Identities=11% Similarity=0.177 Sum_probs=46.6
Q ss_pred EccCCeEEEEecCCCCceEEEeeccCCCceeecccCCCeeEEE-----------eCCCCCeEEEEeCCCcEEEeecC
Q 014755 341 WSSDSQYICTRNDSMPTTLWIWDICRQEPAAILVQKDPIRAAT-----------WDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 341 ~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~-----------~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
|-++..++..+-.+ +.|++..........+.+|...++.++ .||||+.+|.++.||.+++|.+.
T Consensus 191 ~~~~~~~ic~~~~~--~~i~lL~~~ra~~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiy 265 (1283)
T KOG1916|consen 191 IAVNKVYICYGLKG--GEIRLLNINRALRSLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIY 265 (1283)
T ss_pred cccccceeeeccCC--CceeEeeechHHHHHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeee
Confidence 33466777777777 888877766544322334777666554 58999999999999999999876
No 476
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=92.47 E-value=0.16 Score=48.29 Aligned_cols=130 Identities=12% Similarity=0.065 Sum_probs=68.3
Q ss_pred eEEEEEcCCCeEE--EeccCCCCeeeEEEccCC-CEEEEEeecCCCCeEEEEeccC--CeEEEEEe-----ccccceeee
Q 014755 114 RLTVWSLLNTACV--HVQSPKHASKGVAFTQDG-KFAAICTRRDCKDYINLLSCHT--WEIMGVFA-----VDTLDLADI 183 (419)
Q Consensus 114 ~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~g~v~i~d~~~--~~~~~~~~-----~~~~~v~~~ 183 (419)
.+++-+....... .+.+..+.+-.+.|.... ..+. .+ .|.+.+|+++- |+....+. .....+.-+
T Consensus 112 ~vrvaN~~~sm~~~~l~kgf~G~v~dl~fah~~~pk~~---~~--vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V 186 (1283)
T KOG1916|consen 112 GVRVANQEPSMRHNELAKGFPGGVGDLQFAHTKCPKGR---RL--VGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLV 186 (1283)
T ss_pred hhhhccCcchhHHHHHHhcCCCCcccccccccCChHHH---HH--hhhhheeehHhhccccccceEEeecCcCCCCccee
Confidence 4555554432211 145666777777774321 2222 11 25778887753 44333322 222344555
Q ss_pred eECC---CCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeE-----------EEEccCCCeEEEEEecCcEEEE
Q 014755 184 EWSP---DDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKS-----------ISWSPCGQFLAVGSYDQTLRVL 249 (419)
Q Consensus 184 ~~~~---~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~-----------~~~s~~~~~l~~~~~d~~i~v~ 249 (419)
.|.| +..++.+ +..++.+++...+......+..|.. ++.. -..||||+.++.+..||.++.|
T Consensus 187 ~wcp~~~~~~~ic~--~~~~~~i~lL~~~ra~~~l~rsHs~--~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~ 262 (1283)
T KOG1916|consen 187 SWCPIAVNKVYICY--GLKGGEIRLLNINRALRSLFRSHSQ--RVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFY 262 (1283)
T ss_pred eecccccccceeee--ccCCCceeEeeechHHHHHHHhcCC--CcccHHHHhhchhhheeeCCCCcEEEEeecCCcccee
Confidence 5554 4455555 4455666665552222222223322 2222 2378999999999999999888
Q ss_pred EcC
Q 014755 250 NHL 252 (419)
Q Consensus 250 d~~ 252 (419)
.+.
T Consensus 263 Qiy 265 (1283)
T KOG1916|consen 263 QIY 265 (1283)
T ss_pred eee
Confidence 753
No 477
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=92.46 E-value=1.3 Score=34.28 Aligned_cols=30 Identities=27% Similarity=0.612 Sum_probs=25.8
Q ss_pred CeeEEEeCCCCC------eEEEEeCCCcEEEeecCC
Q 014755 378 PIRAATWDPTCT------RLVLCTGSSHLYMWTPSG 407 (419)
Q Consensus 378 ~v~~~~~s~~~~------~l~s~~~dg~i~vw~~~~ 407 (419)
.+.+++|||-|- +||+.+.++.|.||....
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence 688999999653 789999999999999874
No 478
>PRK13614 lipoprotein LpqB; Provisional
Probab=92.18 E-value=10 Score=35.65 Aligned_cols=154 Identities=14% Similarity=0.047 Sum_probs=85.9
Q ss_pred CeEEcCCCCEEEEEeCCeEEEEecCCCcEEE-EeecCcceeEEEEecCCCeEEEEecc-CCeEEEEEcc-CCcc------
Q 014755 12 PSCFSPNARYIAVAVDYRLVVRDAHSFKVVQ-LFSCLDKISYIEWALDSEYILCGLYK-RLMIQAWSLT-QPEW------ 82 (419)
Q Consensus 12 ~~~~s~d~~~la~~~~~~i~i~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~~-~g~i~iw~~~-~~~~------ 82 (419)
.++.|++++.+|...++.-.+|-...+...+ .+. ....+.-+|.++| .+-+.-.. .+.|....-. +++.
T Consensus 347 s~avS~~g~~~A~~~~~~~~l~~~~~g~~~~~~~~-g~~Lt~PS~d~~g-~vWtv~~g~~~~vv~~~~~g~~~~~~~~~~ 424 (573)
T PRK13614 347 SPAESPVSQTVAFLNGSRTTLYTVSPGQPARALTS-GSTLTRPSFSPQD-WVWTAGPGGNGRIVAYRPTGVAEGAQAPTV 424 (573)
T ss_pred ceeecCCCceEEEecCCCcEEEEecCCCcceeeec-CCCccCCcccCCC-CEEEeeCCCCceEEEEecCCCcccccccce
Confidence 3789999999998874333344322233322 333 3357788888888 55444322 1244444322 1110
Q ss_pred eeeeecCCc-cEeEEEECCCCCEEEEEecCCCe--EEEEEc---CCCeEEEec-----cCCCCeeeEEEccCCCEEEEEe
Q 014755 83 TCKIDEGLA-GIAYARWSPDSRHILTTSDFQLR--LTVWSL---LNTACVHVQ-----SPKHASKGVAFTQDGKFAAICT 151 (419)
Q Consensus 83 ~~~~~~~~~-~v~~~~~~~~~~~l~~~~~~~~~--i~iwd~---~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~ 151 (419)
........+ .|..+..|+||..++.....++. |.+--+ ..|.+..+. .....+.+++|..++..++.+.
T Consensus 425 ~v~~~~l~g~~I~~lrvSrDG~R~Avi~~~~g~~~V~va~V~R~~~G~P~~L~~~~~~~~~~~~~sl~W~~~~sl~V~~~ 504 (573)
T PRK13614 425 TLTADWLAGRTVKELRVSREGVRALVISEQNGKSRVQVAGIVRNEDGTPRELTAPITLAADSDADTGAWVGDSTVVVTKA 504 (573)
T ss_pred eecccccCCCeeEEEEECCCccEEEEEEEeCCccEEEEEEEEeCCCCCeEEccCceecccCCCcceeEEcCCCEEEEEec
Confidence 111222233 49999999999998886533334 665433 235433321 1235678999999988777665
Q ss_pred ecCCCCeEEEEeccCC
Q 014755 152 RRDCKDYINLLSCHTW 167 (419)
Q Consensus 152 ~~~~~g~v~i~d~~~~ 167 (419)
..+.+..+++..+..+
T Consensus 505 ~~~~~~~~~~v~v~~g 520 (573)
T PRK13614 505 SATSNVVPELLSVDAG 520 (573)
T ss_pred cCCCcceEEEEEeCCC
Confidence 4333345677776433
No 479
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=92.16 E-value=2.6 Score=32.68 Aligned_cols=24 Identities=21% Similarity=0.267 Sum_probs=19.0
Q ss_pred ccCeEEcCCCCEEEEEeCCeEEEEe
Q 014755 10 TGPSCFSPNARYIAVAVDYRLVVRD 34 (419)
Q Consensus 10 ~~~~~~s~d~~~la~~~~~~i~i~~ 34 (419)
..+++||.|| .||++.++.|.|.+
T Consensus 7 ~~~l~WS~Dg-~laV~t~~~v~IL~ 30 (173)
T PF12657_consen 7 PNALAWSEDG-QLAVATGESVHILD 30 (173)
T ss_pred CcCeeECCCC-CEEEEcCCeEEEEe
Confidence 3569999999 67777777888883
No 480
>KOG4460 consensus Nuclear pore complex, Nup88/rNup84 component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=92.15 E-value=3.9 Score=37.01 Aligned_cols=34 Identities=18% Similarity=0.365 Sum_probs=26.0
Q ss_pred ceeEEEEccCC---CeEEEEEecCcEEEEEcCCceee
Q 014755 224 GVKSISWSPCG---QFLAVGSYDQTLRVLNHLTWKTF 257 (419)
Q Consensus 224 ~v~~~~~s~~~---~~l~~~~~d~~i~v~d~~~~~~~ 257 (419)
.+..++|+|+. ..|..-+.|.+||+||+...+.+
T Consensus 167 tl~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~tel 203 (741)
T KOG4460|consen 167 TLKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEPTEL 203 (741)
T ss_pred eeeeccccCCccCCceEEEEecCcEEEEEecCCcchh
Confidence 46778899875 56777788899999998765544
No 481
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=92.04 E-value=2.5 Score=28.26 Aligned_cols=42 Identities=14% Similarity=0.079 Sum_probs=30.2
Q ss_pred CCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCC
Q 014755 156 KDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSP 198 (419)
Q Consensus 156 ~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 198 (419)
.|.+..||..+++....+.+ -.-.+.+++++|+..+++....
T Consensus 36 ~GRll~ydp~t~~~~vl~~~-L~fpNGVals~d~~~vlv~Et~ 77 (89)
T PF03088_consen 36 TGRLLRYDPSTKETTVLLDG-LYFPNGVALSPDESFVLVAETG 77 (89)
T ss_dssp -EEEEEEETTTTEEEEEEEE-ESSEEEEEE-TTSSEEEEEEGG
T ss_pred CcCEEEEECCCCeEEEehhC-CCccCeEEEcCCCCEEEEEecc
Confidence 47899999998876544443 3467889999999999986544
No 482
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=91.87 E-value=8.1 Score=33.67 Aligned_cols=62 Identities=23% Similarity=0.297 Sum_probs=42.7
Q ss_pred ceeeeeECCCCCeEEEEcCCCC------ceEEEEcCCCceEEEEeec-------------CCCCceeEEEEccCCCeEEE
Q 014755 179 DLADIEWSPDDSAIVIWDSPLE------YKVLIYSPDGRCLLKYQAY-------------ESGLGVKSISWSPCGQFLAV 239 (419)
Q Consensus 179 ~v~~~~~~~~~~~l~~~~~~~~------~~i~~~d~~~~~~~~~~~~-------------~~~~~v~~~~~s~~~~~l~~ 239 (419)
..-++++.++|.+++. ...+ ..|+.++.+|+....+... .......+++++|+|+.|++
T Consensus 86 D~Egi~~~~~g~~~is--~E~~~~~~~~p~I~~~~~~G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~ 163 (326)
T PF13449_consen 86 DPEGIAVPPDGSFWIS--SEGGRTGGIPPRIRRFDLDGRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFA 163 (326)
T ss_pred ChhHeEEecCCCEEEE--eCCccCCCCCCEEEEECCCCcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEE
Confidence 3447788778887776 3345 7899999887776555211 12346889999999997666
Q ss_pred EEe
Q 014755 240 GSY 242 (419)
Q Consensus 240 ~~~ 242 (419)
+.+
T Consensus 164 ~~E 166 (326)
T PF13449_consen 164 AME 166 (326)
T ss_pred EEC
Confidence 543
No 483
>PLN02153 epithiospecifier protein
Probab=91.56 E-value=9 Score=33.63 Aligned_cols=110 Identities=9% Similarity=-0.020 Sum_probs=56.3
Q ss_pred CCCEEEEEeC------CeEEEEecCCCcEEEEeec-----C-cceeEEEEecCCCeEEEEeccC----------CeEEEE
Q 014755 18 NARYIAVAVD------YRLVVRDAHSFKVVQLFSC-----L-DKISYIEWALDSEYILCGLYKR----------LMIQAW 75 (419)
Q Consensus 18 d~~~la~~~~------~~i~i~~~~~~~~~~~~~~-----~-~~v~~~~~s~~~~~l~~~~~~~----------g~i~iw 75 (419)
++++++.|+. ..+.+||..+.+....-.. . ......+..-+++..+.|+.+. ..+.+|
T Consensus 85 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~v~~y 164 (341)
T PLN02153 85 GTKLYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEEGGPEARTFHSMASDENHVYVFGGVSKGGLMKTPERFRTIEAY 164 (341)
T ss_pred CCEEEEECCCCCCCccCcEEEEECCCCEEEEeccCCCCCCCCCceeeEEEEECCEEEEECCccCCCccCCCcccceEEEE
Confidence 4566666651 2477889887654432211 1 1112222233566667766431 147789
Q ss_pred EccCCcceeeeecC---Ccc-EeEEEECCCCCEEEEEecC------------CCeEEEEEcCCCeEEEe
Q 014755 76 SLTQPEWTCKIDEG---LAG-IAYARWSPDSRHILTTSDF------------QLRLTVWSLLNTACVHV 128 (419)
Q Consensus 76 ~~~~~~~~~~~~~~---~~~-v~~~~~~~~~~~l~~~~~~------------~~~i~iwd~~~~~~~~~ 128 (419)
|+.+.+....-... ... -.+++. -+++.++.++.+ ...+.+||+.+.+...+
T Consensus 165 d~~~~~W~~l~~~~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~gG~~~~~~~~v~~yd~~~~~W~~~ 232 (341)
T PLN02153 165 NIADGKWVQLPDPGENFEKRGGAGFAV-VQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKWTEV 232 (341)
T ss_pred ECCCCeEeeCCCCCCCCCCCCcceEEE-ECCeEEEEeccccccccCCccceecCceEEEEcCCCcEEec
Confidence 98877654321110 111 112222 355555554421 12688999998877664
No 484
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=91.50 E-value=6 Score=31.46 Aligned_cols=103 Identities=13% Similarity=0.161 Sum_probs=64.4
Q ss_pred EEEEEeCCeEEEEecC--CCcEEEEeecCcceeEEEEecCCCeEEEEeccC--C---eEEEE---Ecc--CCccee-eee
Q 014755 21 YIAVAVDYRLVVRDAH--SFKVVQLFSCLDKISYIEWALDSEYILCGLYKR--L---MIQAW---SLT--QPEWTC-KID 87 (419)
Q Consensus 21 ~la~~~~~~i~i~~~~--~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~--g---~i~iw---~~~--~~~~~~-~~~ 87 (419)
++++++...|.+|++. ..+++..+.--+.|..+.++..|++|++--.+. . .+|+| +.. ..+.++ ++.
T Consensus 31 Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~vRia 110 (215)
T PF14761_consen 31 LFVAASGCKVEVYDLEQEECPLLCTFSTVGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRVRIA 110 (215)
T ss_pred EEEEcCCCEEEEEEcccCCCceeEEEcchhheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEEEEc
Confidence 3344567789999988 344555677778999999999999999875431 1 45554 222 111111 121
Q ss_pred c---------------------CCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeE
Q 014755 88 E---------------------GLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTAC 125 (419)
Q Consensus 88 ~---------------------~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~ 125 (419)
+ -..++.+++-.|-.-.|+.++.+ .+.+|.+..+..
T Consensus 111 G~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~~~--~l~lf~l~~~~~ 167 (215)
T PF14761_consen 111 GHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGCGN--KLVLFTLKYQTI 167 (215)
T ss_pred ccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEEcCC--EEEEEEEEEEEE
Confidence 2 12345677777755556666654 799998875443
No 485
>TIGR03032 conserved hypothetical protein TIGR03032. This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.
Probab=91.17 E-value=8.2 Score=32.77 Aligned_cols=109 Identities=16% Similarity=0.189 Sum_probs=0.0
Q ss_pred EEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEee
Q 014755 73 QAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTR 152 (419)
Q Consensus 73 ~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 152 (419)
.++|+.+++ .+...-.-..+..|. +|+..++-+..+ .+.-+|.++|+...+...++....++|. |++++++-.
T Consensus 188 ~vidv~s~e---vl~~GLsmPhSPRWh-dgrLwvldsgtG-ev~~vD~~~G~~e~Va~vpG~~rGL~f~--G~llvVgmS 260 (335)
T TIGR03032 188 CVIDIPSGE---VVASGLSMPHSPRWY-QGKLWLLNSGRG-ELGYVDPQAGKFQPVAFLPGFTRGLAFA--GDFAFVGLS 260 (335)
T ss_pred EEEEeCCCC---EEEcCccCCcCCcEe-CCeEEEEECCCC-EEEEEcCCCCcEEEEEECCCCCccccee--CCEEEEEec
Q ss_pred c-----------------CCCCeEEEEeccCCeEEEEEeccc--cceeeeeECCC
Q 014755 153 R-----------------DCKDYINLLSCHTWEIMGVFAVDT--LDLADIEWSPD 188 (419)
Q Consensus 153 ~-----------------~~~g~v~i~d~~~~~~~~~~~~~~--~~v~~~~~~~~ 188 (419)
. ....-|.+.|+++|..+..++... ..+..++.-|.
T Consensus 261 k~R~~~~f~glpl~~~l~~~~CGv~vidl~tG~vv~~l~feg~v~EifdV~vLPg 315 (335)
T TIGR03032 261 KLRESRVFGGLPIEERLDALGCGVAVIDLNSGDVVHWLRFEGVIEEIYDVAVLPG 315 (335)
T ss_pred cccCCCCcCCCchhhhhhhhcccEEEEECCCCCEEEEEEeCCceeEEEEEEEecC
No 486
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=90.78 E-value=16 Score=35.18 Aligned_cols=178 Identities=19% Similarity=0.197 Sum_probs=98.0
Q ss_pred cCeEEcCCCCEEEEEeCC----------eEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCC-eEEEEEccC
Q 014755 11 GPSCFSPNARYIAVAVDY----------RLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRL-MIQAWSLTQ 79 (419)
Q Consensus 11 ~~~~~s~d~~~la~~~~~----------~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g-~i~iw~~~~ 79 (419)
+...++|++..++...+. .+.+-|... +....+...+..+.|+|+|..++..+.+.+ ...+|-+..
T Consensus 16 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~l~l~~~ 92 (620)
T COG1506 16 SDPRVSPPGGRLAYILTGLDFLKPLYKSSLWVSDGKT---VRLLTFGGGVSELRWSPDGSVLAFVSTDGGRVAQLYLVDV 92 (620)
T ss_pred cCcccCCCCceeEEeeccccccccccccceEEEeccc---ccccccCCcccccccCCCCCEEEEEeccCCCcceEEEEec
Confidence 336678888777776532 233333332 444456778899999999999998873312 233443332
Q ss_pred CcceeeeecCCccEeEEEECCCCCEEEEEe------cCCC------eEEEEEcCCC-eEE------------EeccCCCC
Q 014755 80 PEWTCKIDEGLAGIAYARWSPDSRHILTTS------DFQL------RLTVWSLLNT-ACV------------HVQSPKHA 134 (419)
Q Consensus 80 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~~~~------~i~iwd~~~~-~~~------------~~~~~~~~ 134 (419)
+. .+..+...+....|+|+++.++... .++. .+.+|....+ +.. ........
T Consensus 93 ~g---~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~d~~~~~~~~~~~~~~ 169 (620)
T COG1506 93 GG---LITKTAFGVSDARWSPDGDRIAFLTAEGASKRDGGDHLFVDRLPVWFDGRGGERSDLYVVDIESKLIKLGLGNLD 169 (620)
T ss_pred CC---ceeeeecccccceeCCCCCeEEEEecccccccCCceeeeecccceeecCCCCcccceEEEccCcccccccCCCCc
Confidence 21 3344556678888999998887721 1110 1233332222 111 12223334
Q ss_pred eeeEEEccCCCEEEEEeecCC-CC---eEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEE
Q 014755 135 SKGVAFTQDGKFAAICTRRDC-KD---YINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIW 195 (419)
Q Consensus 135 ~~~~~~~~~~~~l~~~~~~~~-~g---~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 195 (419)
+....+++++..++....+.. .. ...++.. ....+..+......+..+.+.++++.+++.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~gk~~~~~ 233 (620)
T COG1506 170 VVSFATDGDGRLVASIRLDDDADPWVTNLYVLIE-GNGELESLTPGEGSISKLAFDADGKSIALL 233 (620)
T ss_pred eeeeeeCCCCceeEEeeeccccCCceEeeEEEec-CCCceEEEcCCCceeeeeeeCCCCCeeEEe
Confidence 456666666666666554421 12 2233333 223334444455668888999999866653
No 487
>PRK13613 lipoprotein LpqB; Provisional
Probab=90.63 E-value=16 Score=34.82 Aligned_cols=176 Identities=7% Similarity=-0.021 Sum_probs=93.5
Q ss_pred CeEEcCCCCEEEEEeC-C-eEEEEecCCCcE-----EEEeecCcceeEEEEecCCCeEEEEec-cCC--eEEEEEccCCc
Q 014755 12 PSCFSPNARYIAVAVD-Y-RLVVRDAHSFKV-----VQLFSCLDKISYIEWALDSEYILCGLY-KRL--MIQAWSLTQPE 81 (419)
Q Consensus 12 ~~~~s~d~~~la~~~~-~-~i~i~~~~~~~~-----~~~~~~~~~v~~~~~s~~~~~l~~~~~-~~g--~i~iw~~~~~~ 81 (419)
.++.|+++..+|.... + .+++..+..+.. ...+ .....+..+|.++| .+-+... ..+ .+++..- +++
T Consensus 367 s~avS~~g~~~A~v~~~~~~l~vg~~~~~~~~~~~~~~~~-~~~~Lt~PS~d~~g-~vWtvd~~~~~~~vl~v~~~-~G~ 443 (599)
T PRK13613 367 RVAVSRDESRAAGISADGDSVYVGSLTPGASIGVHSWGVT-ADGRLTSPSWDGRG-DLWVVDRDPADPRLLWLLQG-DGE 443 (599)
T ss_pred ceEEcCCCceEEEEcCCCcEEEEeccCCCCccccccceee-ccCcccCCcCcCCC-CEEEecCCCCCceEEEEEcC-CCc
Confidence 3789999999998873 3 366655533332 1122 23457777888877 3444321 112 2555543 444
Q ss_pred cee-eeecCCc-cEeEEEECCCCCEEEEEecC--CCeEEEEEcC---CCe-E----EEeccCCCCeeeEEEccCCCEEEE
Q 014755 82 WTC-KIDEGLA-GIAYARWSPDSRHILTTSDF--QLRLTVWSLL---NTA-C----VHVQSPKHASKGVAFTQDGKFAAI 149 (419)
Q Consensus 82 ~~~-~~~~~~~-~v~~~~~~~~~~~l~~~~~~--~~~i~iwd~~---~~~-~----~~~~~~~~~~~~~~~~~~~~~l~~ 149 (419)
... ......+ .|..+..|+||-.++...+. +++|.+=-+. .+. . ..+...-..+.+++|..++..++.
T Consensus 444 ~~~V~~~~l~g~~I~~lrvSrDG~RvAvv~~~~g~~~v~va~V~R~~~G~~~l~~~~~l~~~l~~v~~~~W~~~~sL~Vl 523 (599)
T PRK13613 444 PVEVRTPELDGHRVVAVRVARDGVRVALIVEKDGRRSLQIGRIVRDAKAVVSVEEFRSLAPELEDVTDMSWAGDSQLVVL 523 (599)
T ss_pred EEEeeccccCCCEeEEEEECCCccEEEEEEecCCCcEEEEEEEEeCCCCcEEeeccEEeccCCCccceeEEcCCCEEEEE
Confidence 321 1112223 79999999999998876542 2355554332 232 1 112222334789999999887775
Q ss_pred EeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCC
Q 014755 150 CTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDS 190 (419)
Q Consensus 150 ~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 190 (419)
+...+.+..+++.++............-..+..++-..+.+
T Consensus 524 g~~~~~~~~v~~v~vdG~~~~~~~~~~v~~~~~ia~~~~~~ 564 (599)
T PRK13613 524 GREEGGVQQARYVQVDGSTPPASAPAAVTGVESITASEDER 564 (599)
T ss_pred eccCCCCcceEEEecCCcCcccccccCCCCeeEEEecCCCC
Confidence 64332223555556554332211212223344455554444
No 488
>KOG4460 consensus Nuclear pore complex, Nup88/rNup84 component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=90.50 E-value=5.7 Score=36.02 Aligned_cols=71 Identities=13% Similarity=0.158 Sum_probs=48.9
Q ss_pred ceEEEEEccCCeEEEEecCCCCceEEEee---------ccCCCce---ee-------c--ccCCCeeEEEeCCCC---Ce
Q 014755 335 GIGLMSWSSDSQYICTRNDSMPTTLWIWD---------ICRQEPA---AI-------L--VQKDPIRAATWDPTC---TR 390 (419)
Q Consensus 335 ~v~~~~~s~~g~~l~~~~~d~~~~i~iwd---------~~~~~~~---~~-------~--~~~~~v~~~~~s~~~---~~ 390 (419)
.|..+..|+.|..++..+.+ |.+.++= .+.|+.. ++ + ...-.+..++|+|+. ..
T Consensus 105 eV~~vl~s~~GS~VaL~G~~--Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~h 182 (741)
T KOG4460|consen 105 EVYQVLLSPTGSHVALIGIK--GLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPH 182 (741)
T ss_pred EEEEEEecCCCceEEEecCC--eeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCce
Confidence 47888999999999988886 6544432 1223321 11 1 122346789999987 47
Q ss_pred EEEEeCCCcEEEeecCC
Q 014755 391 LVLCTGSSHLYMWTPSG 407 (419)
Q Consensus 391 l~s~~~dg~i~vw~~~~ 407 (419)
|..-+.|..|++|++..
T Consensus 183 L~iL~sdnviRiy~lS~ 199 (741)
T KOG4460|consen 183 LVLLTSDNVIRIYSLSE 199 (741)
T ss_pred EEEEecCcEEEEEecCC
Confidence 77788899999999984
No 489
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=90.22 E-value=12 Score=32.94 Aligned_cols=187 Identities=10% Similarity=0.063 Sum_probs=97.7
Q ss_pred CCCEEEEEe-CCeEEEEecCCCcEEEEeecCcceeEEEEe----cCCCe--EEEEeccC---CeEEEEEccCC-cceeee
Q 014755 18 NARYIAVAV-DYRLVVRDAHSFKVVQLFSCLDKISYIEWA----LDSEY--ILCGLYKR---LMIQAWSLTQP-EWTCKI 86 (419)
Q Consensus 18 d~~~la~~~-~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s----~~~~~--l~~~~~~~---g~i~iw~~~~~-~~~~~~ 86 (419)
...+|+... ++.+.+||+...++.. +. .+..+.+..- -+|+. |++++..+ .+|++|.+... ..+..+
T Consensus 67 ~kSlIigTdK~~GL~VYdL~Gk~lq~-~~-~Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~L~~v 144 (381)
T PF02333_consen 67 AKSLIIGTDKKGGLYVYDLDGKELQS-LP-VGRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGELTDV 144 (381)
T ss_dssp GG-EEEEEETTTEEEEEETTS-EEEE-E--SS-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTEEEE-
T ss_pred ccceEEEEeCCCCEEEEcCCCcEEEe-ec-CCCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCcceEc
Confidence 334444444 6779999998665443 32 2334444332 13443 45555321 47999987632 122233
Q ss_pred ec-------CCccEeEEEE--CC-CCCEEEEEecCCCeEEEEEcC---CC----eEEEeccCCCCeeeEEEccCCCEEEE
Q 014755 87 DE-------GLAGIAYARW--SP-DSRHILTTSDFQLRLTVWSLL---NT----ACVHVQSPKHASKGVAFTQDGKFAAI 149 (419)
Q Consensus 87 ~~-------~~~~v~~~~~--~~-~~~~l~~~~~~~~~i~iwd~~---~~----~~~~~~~~~~~~~~~~~~~~~~~l~~ 149 (419)
.. ....+..+++ ++ +|+..+......|.+..|.+. .+ +.++.......+..+.......+|+.
T Consensus 145 ~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~sQ~EGCVVDDe~g~LYv 224 (381)
T PF02333_consen 145 TDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKVGSQPEGCVVDDETGRLYV 224 (381)
T ss_dssp CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-SS-EEEEEEETTTTEEEE
T ss_pred CCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecCCCcceEEEEecccCCEEE
Confidence 21 1233566665 44 566666655444588888775 23 34443334557788888888889999
Q ss_pred EeecCCCCeEEEEeccC-----CeEEEEEec--cccceeeeeEC--CCCC-eEEEEcCCCCceEEEEcCCC
Q 014755 150 CTRRDCKDYINLLSCHT-----WEIMGVFAV--DTLDLADIEWS--PDDS-AIVIWDSPLEYKVLIYSPDG 210 (419)
Q Consensus 150 ~~~~~~~g~v~i~d~~~-----~~~~~~~~~--~~~~v~~~~~~--~~~~-~l~~~~~~~~~~i~~~d~~~ 210 (419)
+-++ .-|+-|+.+. ++.+....+ ....+-.+++. ++++ +|++. ...+++..+|+..+
T Consensus 225 gEE~---~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivS-sQG~~sf~Vy~r~~ 291 (381)
T PF02333_consen 225 GEED---VGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVS-SQGDNSFAVYDREG 291 (381)
T ss_dssp EETT---TEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEE-EGGGTEEEEEESST
T ss_pred ecCc---cEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEE-cCCCCeEEEEecCC
Confidence 8876 5677777752 222222222 22456666664 4444 44443 45578899999843
No 490
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=90.22 E-value=13 Score=33.27 Aligned_cols=147 Identities=12% Similarity=0.077 Sum_probs=81.5
Q ss_pred EeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCe---
Q 014755 93 IAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWE--- 168 (419)
Q Consensus 93 v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~--- 168 (419)
...+..++++..++++..-. .++-||--...... -......+..+.+.+++..++++.. |.+.. ....++
T Consensus 241 f~~v~~~~dG~~~~vg~~G~-~~~s~d~G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g~~----G~l~~-S~d~G~~~~ 314 (398)
T PLN00033 241 FSTVNRSPDGDYVAVSSRGN-FYLTWEPGQPYWQPHNRASARRIQNMGWRADGGLWLLTRG----GGLYV-SKGTGLTEE 314 (398)
T ss_pred eeeEEEcCCCCEEEEECCcc-EEEecCCCCcceEEecCCCccceeeeeEcCCCCEEEEeCC----ceEEE-ecCCCCccc
Confidence 34456678887777665422 33334432221122 2333456789999999988877643 44433 333332
Q ss_pred --EEEEEec--cccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEee-cCCCCceeEEEEccCCCeEEEEEec
Q 014755 169 --IMGVFAV--DTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQA-YESGLGVKSISWSPCGQFLAVGSYD 243 (419)
Q Consensus 169 --~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~d 243 (419)
....... ....+..+.|.+++..+++ ...|.+..-.-.|+.-..... ..-....+.+.|.++++-+++| .+
T Consensus 315 ~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~---G~~G~v~~s~D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G-~~ 390 (398)
T PLN00033 315 DFDFEEADIKSRGFGILDVGYRSKKEAWAA---GGSGILLRSTDGGKSWKRDKGADNIAANLYSVKFFDDKKGFVLG-ND 390 (398)
T ss_pred ccceeecccCCCCcceEEEEEcCCCcEEEE---ECCCcEEEeCCCCcceeEccccCCCCcceeEEEEcCCCceEEEe-CC
Confidence 1222221 1234888999988887776 335666665545554443321 1112257899988776666554 46
Q ss_pred CcEEEE
Q 014755 244 QTLRVL 249 (419)
Q Consensus 244 ~~i~v~ 249 (419)
|.|.-|
T Consensus 391 G~il~~ 396 (398)
T PLN00033 391 GVLLRY 396 (398)
T ss_pred cEEEEe
Confidence 666544
No 491
>COG5290 IkappaB kinase complex, IKAP component [Transcription]
Probab=89.79 E-value=20 Score=34.65 Aligned_cols=32 Identities=19% Similarity=0.355 Sum_probs=23.8
Q ss_pred cCCccEeEEEECCCCCEEEEEecCCCeEEEEEc
Q 014755 88 EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSL 120 (419)
Q Consensus 88 ~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~ 120 (419)
.-.+.|...+||.|.+.++....+. .|.+++-
T Consensus 110 ~v~nGIvaa~wS~DE~~~cvvt~~r-~il~~~k 141 (1243)
T COG5290 110 KVSNGIVAASWSADEKTWCVVTSTR-EILLFDK 141 (1243)
T ss_pred cccCceEEEeeccCCceEEEEEcCc-eEEEEec
Confidence 3456789999999999776666655 7777763
No 492
>PRK13613 lipoprotein LpqB; Provisional
Probab=89.68 E-value=19 Score=34.30 Aligned_cols=194 Identities=14% Similarity=0.100 Sum_probs=106.4
Q ss_pred ceeEEEEecCCCeEEEEeccCCeEEEEEccCCcc----eeeeecCCccEeEEEECCCCCEEEEEec-CCC--eEEEEEcC
Q 014755 49 KISYIEWALDSEYILCGLYKRLMIQAWSLTQPEW----TCKIDEGLAGIAYARWSPDSRHILTTSD-FQL--RLTVWSLL 121 (419)
Q Consensus 49 ~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~--~i~iwd~~ 121 (419)
.+.+++.++++..+|....+...+++..+..+.. ...+. .....+...|.+++ .+-+... ..+ .+++..-
T Consensus 364 ~~~s~avS~~g~~~A~v~~~~~~l~vg~~~~~~~~~~~~~~~~-~~~~Lt~PS~d~~g-~vWtvd~~~~~~~vl~v~~~- 440 (599)
T PRK13613 364 PLRRVAVSRDESRAAGISADGDSVYVGSLTPGASIGVHSWGVT-ADGRLTSPSWDGRG-DLWVVDRDPADPRLLWLLQG- 440 (599)
T ss_pred CccceEEcCCCceEEEEcCCCcEEEEeccCCCCccccccceee-ccCcccCCcCcCCC-CEEEecCCCCCceEEEEEcC-
Confidence 6788999999999988875533666665543432 11121 12346677787777 4555422 111 2555543
Q ss_pred CCeEEE--eccCC-CCeeeEEEccCCCEEEEEeecCCCCeEEEEecc---CCe-EEE---EEeccccceeeeeECCCCCe
Q 014755 122 NTACVH--VQSPK-HASKGVAFTQDGKFAAICTRRDCKDYINLLSCH---TWE-IMG---VFAVDTLDLADIEWSPDDSA 191 (419)
Q Consensus 122 ~~~~~~--~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~---~~~-~~~---~~~~~~~~v~~~~~~~~~~~ 191 (419)
+++... ..... ..|..+..|+||-.++.....++.+.|++=-+. .++ .+. .+......+.+++|..++.+
T Consensus 441 ~G~~~~V~~~~l~g~~I~~lrvSrDG~RvAvv~~~~g~~~v~va~V~R~~~G~~~l~~~~~l~~~l~~v~~~~W~~~~sL 520 (599)
T PRK13613 441 DGEPVEVRTPELDGHRVVAVRVARDGVRVALIVEKDGRRSLQIGRIVRDAKAVVSVEEFRSLAPELEDVTDMSWAGDSQL 520 (599)
T ss_pred CCcEEEeeccccCCCEeEEEEECCCccEEEEEEecCCCcEEEEEEEEeCCCCcEEeeccEEeccCCCccceeEEcCCCEE
Confidence 444433 22222 378999999999888776654444566654332 232 111 12222345889999999887
Q ss_pred EEEEc-CCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCC-eEEEEEecCcE
Q 014755 192 IVIWD-SPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQ-FLAVGSYDQTL 246 (419)
Q Consensus 192 l~~~~-~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~d~~i 246 (419)
+++.. ...+..++..+++|........ ..-..+..++-..+.. .++.+..++.|
T Consensus 521 ~Vlg~~~~~~~~v~~v~vdG~~~~~~~~-~~v~~~~~ia~~~~~~~~~v~~~~~~~v 576 (599)
T PRK13613 521 VVLGREEGGVQQARYVQVDGSTPPASAP-AAVTGVESITASEDERLPLVAGTSEDGI 576 (599)
T ss_pred EEEeccCCCCcceEEEecCCcCcccccc-cCCCCeeEEEecCCCCceEEEEecCCCe
Confidence 77531 1223556666666543321110 1111466666666655 44443555554
No 493
>COG5290 IkappaB kinase complex, IKAP component [Transcription]
Probab=89.32 E-value=6.5 Score=37.67 Aligned_cols=94 Identities=7% Similarity=0.098 Sum_probs=54.5
Q ss_pred EeEEEECCCCCEEEEEecCC----CeEEEEEcCC---CeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEecc
Q 014755 93 IAYARWSPDSRHILTTSDFQ----LRLTVWSLLN---TACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCH 165 (419)
Q Consensus 93 v~~~~~~~~~~~l~~~~~~~----~~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~ 165 (419)
-..+.|-|+|..+++-+.|+ ..|..+.... |+.-...+....+...+|+-....++++.. ..+.+|-..
T Consensus 249 e~~LSWkpqgS~~ati~td~~~~S~~ViFfErNGLrHGef~lr~~~dEk~~~~~wn~~s~vlav~~~----n~~~lwttk 324 (1243)
T COG5290 249 EHQLSWKPQGSKYATIGTDGCSTSESVIFFERNGLRHGEFDLRVGCDEKAFLENWNLLSTVLAVAEG----NLLKLWTTK 324 (1243)
T ss_pred hhccccccCCceeeeeccCCCCCcceEEEEccCCcccCCccccCCchhhhhhhhhhHHHHHHHHhhc----ceEEEEEcc
Confidence 34588999999999986442 2455554332 222111223334566777766666666654 489999877
Q ss_pred CCeEEEEEeccccceeeeeECCCCC
Q 014755 166 TWEIMGVFAVDTLDLADIEWSPDDS 190 (419)
Q Consensus 166 ~~~~~~~~~~~~~~v~~~~~~~~~~ 190 (419)
+-..-......-..+.-+.|+|...
T Consensus 325 NyhWYLK~e~~ip~~s~vkwhpe~~ 349 (1243)
T COG5290 325 NYHWYLKVERQIPGISYVKWHPEEK 349 (1243)
T ss_pred ceEEEEEEeecCCCcceeeeccccC
Confidence 6443222222223456677887654
No 494
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=89.29 E-value=9.7 Score=30.34 Aligned_cols=101 Identities=8% Similarity=0.095 Sum_probs=59.7
Q ss_pred CeEEEEeccCCeEEEEEccCC--cceeeeecCCccEeEEEECCCCCEEEEEecCC--C---eEEEE---EcC--CCeEEE
Q 014755 60 EYILCGLYKRLMIQAWSLTQP--EWTCKIDEGLAGIAYARWSPDSRHILTTSDFQ--L---RLTVW---SLL--NTACVH 127 (419)
Q Consensus 60 ~~l~~~~~~~g~i~iw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~--~---~i~iw---d~~--~~~~~~ 127 (419)
+.|+.+... ..|.+|++.+. +...++. .-+.|..+.++..|++|++--.+. . .+++| ... ..+++.
T Consensus 29 d~Lfva~~g-~~Vev~~l~~~~~~~~~~F~-Tv~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~ 106 (215)
T PF14761_consen 29 DALFVAASG-CKVEVYDLEQEECPLLCTFS-TVGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVR 106 (215)
T ss_pred ceEEEEcCC-CEEEEEEcccCCCceeEEEc-chhheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEE
Confidence 344433323 68999999833 3333443 347899999999999999974322 1 45554 221 111111
Q ss_pred --ecc---------------------CCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC
Q 014755 128 --VQS---------------------PKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT 166 (419)
Q Consensus 128 --~~~---------------------~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~ 166 (419)
+.+ ....+.+++..|-...|++|+. +.+.+|.+..
T Consensus 107 vRiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~~----~~l~lf~l~~ 164 (215)
T PF14761_consen 107 VRIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGCG----NKLVLFTLKY 164 (215)
T ss_pred EEEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEEcC----CEEEEEEEEE
Confidence 111 1234567777776666666665 4888887653
No 495
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=89.14 E-value=16 Score=32.74 Aligned_cols=104 Identities=14% Similarity=0.235 Sum_probs=58.5
Q ss_pred eeEEEccCCCEEEEEeecCCCCeEEE-EeccC--CeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCc-
Q 014755 136 KGVAFTQDGKFAAICTRRDCKDYINL-LSCHT--WEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGR- 211 (419)
Q Consensus 136 ~~~~~~~~~~~l~~~~~~~~~g~v~i-~d~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~- 211 (419)
..+..++++.+++++.. |.+.. ||--. ++.+ -......+..+.+.+++..+++ ...|.+..-+-.++
T Consensus 242 ~~v~~~~dG~~~~vg~~----G~~~~s~d~G~~~W~~~--~~~~~~~l~~v~~~~dg~l~l~---g~~G~l~~S~d~G~~ 312 (398)
T PLN00033 242 STVNRSPDGDYVAVSSR----GNFYLTWEPGQPYWQPH--NRASARRIQNMGWRADGGLWLL---TRGGGLYVSKGTGLT 312 (398)
T ss_pred eeEEEcCCCCEEEEECC----ccEEEecCCCCcceEEe--cCCCccceeeeeEcCCCCEEEE---eCCceEEEecCCCCc
Confidence 34566788888777764 44433 33221 1222 2223456889999999998876 23555554443443
Q ss_pred ----eEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEE
Q 014755 212 ----CLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVL 249 (419)
Q Consensus 212 ----~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~ 249 (419)
.............+.++.|.+++..+++| ..|.+...
T Consensus 313 ~~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~G-~~G~v~~s 353 (398)
T PLN00033 313 EEDFDFEEADIKSRGFGILDVGYRSKKEAWAAG-GSGILLRS 353 (398)
T ss_pred ccccceeecccCCCCcceEEEEEcCCCcEEEEE-CCCcEEEe
Confidence 22222222122358889999887665554 46666554
No 496
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family. Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.
Probab=88.37 E-value=17 Score=31.98 Aligned_cols=40 Identities=3% Similarity=-0.124 Sum_probs=20.7
Q ss_pred eEEEeeccCCCceeecccCC-CeeEEEeCCCCCeEEEEeCC
Q 014755 358 TLWIWDICRQEPAAILVQKD-PIRAATWDPTCTRLVLCTGS 397 (419)
Q Consensus 358 ~i~iwd~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~s~~~d 397 (419)
.+.+||.++.+......... .-...+..-++++++.|+.+
T Consensus 291 ~~e~yd~~~~~W~~~~~lp~~~~~~~~~~~~~~iyv~GG~~ 331 (346)
T TIGR03547 291 SSEVYALDNGKWSKVGKLPQGLAYGVSVSWNNGVLLIGGEN 331 (346)
T ss_pred EeeEEEecCCcccccCCCCCCceeeEEEEcCCEEEEEeccC
Confidence 46788887765433322111 11222333467777777764
No 497
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=88.24 E-value=1.7 Score=41.07 Aligned_cols=68 Identities=9% Similarity=0.096 Sum_probs=42.1
Q ss_pred cCCeEEEEecCCCCceEEEeeccC----CCcee---------------ecc--------cCCCeeEEEeCC----CCCeE
Q 014755 343 SDSQYICTRNDSMPTTLWIWDICR----QEPAA---------------ILV--------QKDPIRAATWDP----TCTRL 391 (419)
Q Consensus 343 ~~g~~l~~~~~d~~~~i~iwd~~~----~~~~~---------------~~~--------~~~~v~~~~~s~----~~~~l 391 (419)
++...++.+..| |.+....... +.... .++ ....+..+++++ +..+|
T Consensus 156 ~~~~~l~v~~~d--G~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 233 (547)
T PF11715_consen 156 DSEANLVVSLQD--GGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFL 233 (547)
T ss_dssp -SSSBEEEEESS--S-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEE
T ss_pred cCCCEEEEEECC--CCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEE
Confidence 466677777777 8887777664 11110 000 123456667766 67799
Q ss_pred EEEeCCCcEEEeecCCCeEEe
Q 014755 392 VLCTGSSHLYMWTPSGAYCVS 412 (419)
Q Consensus 392 ~s~~~dg~i~vw~~~~~~~~~ 412 (419)
++.+.|+++|+||+.+++++.
T Consensus 234 ~tl~~D~~LRiW~l~t~~~~~ 254 (547)
T PF11715_consen 234 FTLSRDHTLRIWSLETGQCLA 254 (547)
T ss_dssp EEEETTSEEEEEETTTTCEEE
T ss_pred EEEeCCCeEEEEECCCCeEEE
Confidence 999999999999999998854
No 498
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=88.05 E-value=6.1 Score=26.48 Aligned_cols=41 Identities=17% Similarity=0.127 Sum_probs=33.0
Q ss_pred CeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEecc
Q 014755 28 YRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYK 68 (419)
Q Consensus 28 ~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~ 68 (419)
|.+..||..+++...+...-.-.+.++++||++.++++-.-
T Consensus 37 GRll~ydp~t~~~~vl~~~L~fpNGVals~d~~~vlv~Et~ 77 (89)
T PF03088_consen 37 GRLLRYDPSTKETTVLLDGLYFPNGVALSPDESFVLVAETG 77 (89)
T ss_dssp EEEEEEETTTTEEEEEEEEESSEEEEEE-TTSSEEEEEEGG
T ss_pred cCEEEEECCCCeEEEehhCCCccCeEEEcCCCCEEEEEecc
Confidence 56888999999987777766778999999999988887543
No 499
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=87.79 E-value=15 Score=30.79 Aligned_cols=139 Identities=9% Similarity=0.004 Sum_probs=82.1
Q ss_pred CCEEEEEe-CCeEEEEecCCCcEEEEee---cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcce---eeeecCCc
Q 014755 19 ARYIAVAV-DYRLVVRDAHSFKVVQLFS---CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWT---CKIDEGLA 91 (419)
Q Consensus 19 ~~~la~~~-~~~i~i~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~---~~~~~~~~ 91 (419)
+++...+. +..++|.|+.+...-.+.+ -.+--.++..+ |++..++..++ -.-+.|+.+.+.. .+......
T Consensus 96 e~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~vs--Gn~aYVadldd-gfLivdvsdpssP~lagrya~~~~ 172 (370)
T COG5276 96 EEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYVS--GNYAYVADLDD-GFLIVDVSDPSSPQLAGRYALPGG 172 (370)
T ss_pred ccEEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEec--CCEEEEeeccC-cEEEEECCCCCCceeeeeeccCCC
Confidence 34555554 4569999988755433332 22444555555 88888887775 4677788766433 22323333
Q ss_pred cEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEe---ccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCe
Q 014755 92 GIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHV---QSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWE 168 (419)
Q Consensus 92 ~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~ 168 (419)
.-..++.| |++-..+..++ -+.+.|+.......+ ......+.++..+++..+++.... -+.+-|..+.+
T Consensus 173 d~~~v~IS--Gn~AYvA~~d~-GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~vvy~e-----gvlivd~s~~s 244 (370)
T COG5276 173 DTHDVAIS--GNYAYVAWRDG-GLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYLVVYDE-----GVLIVDVSGPS 244 (370)
T ss_pred CceeEEEe--cCeEEEEEeCC-CeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEEEEccc-----ceEEEecCCCC
Confidence 33556664 55555555665 688999887433332 222335677888877777766553 47777776654
No 500
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=87.72 E-value=31 Score=34.30 Aligned_cols=213 Identities=14% Similarity=0.130 Sum_probs=0.0
Q ss_pred EEEEEeecCCCCeEEEEeccCC-------------------eEEEEEe-ccccceeeeeEC-------CCCCeEEEEcCC
Q 014755 146 FAAICTRRDCKDYINLLSCHTW-------------------EIMGVFA-VDTLDLADIEWS-------PDDSAIVIWDSP 198 (419)
Q Consensus 146 ~l~~~~~~~~~g~v~i~d~~~~-------------------~~~~~~~-~~~~~v~~~~~~-------~~~~~l~~~~~~ 198 (419)
.+|+++...+ ..+++--+... .....+. ....+|..+.|. +..++|++ .
T Consensus 29 i~A~asGesg-~~L~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~i~~~~PI~qI~fa~~~~~~~~~~~~l~V---r 104 (765)
T PF10214_consen 29 ILAFASGESG-SVLRLSRLDEEEWSWGNNDDASLRVPTIDPELSGAWSIDDGSPIKQIKFATLSESFDEKSRWLAV---R 104 (765)
T ss_pred EEEEecCCCC-CeeEEEEecccccccccccccccccCCCCccccceeEcCCCCCeeEEEecccccccCCcCcEEEE---E
Q ss_pred CCceEEEEc----------------CCCceEEEEeecCCC-CceeEEEEcc-CCCeEEEEEecCcEEEEEcCCceeeeee
Q 014755 199 LEYKVLIYS----------------PDGRCLLKYQAYESG-LGVKSISWSP-CGQFLAVGSYDQTLRVLNHLTWKTFAEF 260 (419)
Q Consensus 199 ~~~~i~~~d----------------~~~~~~~~~~~~~~~-~~v~~~~~s~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 260 (419)
....+.++. +...++..+..+.-. .+...++|+| +.+.||.....|...||++ .+......
T Consensus 105 t~~st~I~~p~~~~~~~~~~~~~s~i~~~~l~~i~~~~tgg~~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i-~~~~~~~~ 183 (765)
T PF10214_consen 105 TETSTTILRPEYHRVISSIRSRPSRIDPNPLLTISSSDTGGFPHADVAFNPWDQRQFAIVDEKGNWSVWDI-KGRPKRKS 183 (765)
T ss_pred cCCEEEEEEcccccccccccCCccccccceeEEechhhcCCCccceEEeccCccceEEEEeccCcEEEEEe-ccccccCC
Q ss_pred cccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEE
Q 014755 261 MHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMS 340 (419)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 340 (419)
..........+.+.+.+ .....-..+.
T Consensus 184 ~~~~~~~~~~gsi~~d~-----------------------------------------------------~e~s~w~rI~ 210 (765)
T PF10214_consen 184 SNLRLSRNISGSIIFDP-----------------------------------------------------EELSNWKRIL 210 (765)
T ss_pred cceeeccCCCccccCCC-----------------------------------------------------cccCcceeeE
Q ss_pred EccCCeEEEEecCCCCceEEEeeccCCCc---eeecccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCC---CeEEecC
Q 014755 341 WSSDSQYICTRNDSMPTTLWIWDICRQEP---AAILVQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSG---AYCVSNP 414 (419)
Q Consensus 341 ~s~~g~~l~~~~~d~~~~i~iwd~~~~~~---~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~---~~~~~~~ 414 (419)
|.++-..|+..+. ..+.++|+++... +........|.++.-+|+..-.+..-....|...++.. .-..-+.
T Consensus 211 W~~~~~~lLv~~r---~~l~~~d~~~~~~~~~l~~~~~~~~IlDv~~~~~~~~~~FiLTs~eiiw~~~~~~~~~~~~llS 287 (765)
T PF10214_consen 211 WVSDSNRLLVCNR---SKLMLIDFESNWQTEYLVTAKTWSWILDVKRSPDNPSHVFILTSKEIIWLDVKSSSEKLTRLLS 287 (765)
T ss_pred ecCCCCEEEEEcC---CceEEEECCCCCccchhccCCChhheeeEEecCCccceEEEEecCeEEEEEccCCCCCeeeeee
Q ss_pred CCCCC
Q 014755 415 LPQFN 419 (419)
Q Consensus 415 ~~~f~ 419 (419)
-+||.
T Consensus 288 wkH~~ 292 (765)
T PF10214_consen 288 WKHFR 292 (765)
T ss_pred ccccc
Done!