Query 014755
Match_columns 419
No_of_seqs 784 out of 1603
Neff 11.9
Searched_HMMs 29240
Date Mon Mar 25 17:14:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014755.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014755hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nr0_A Actin interacting prote 100.0 1E-51 3.4E-56 387.7 48.7 382 8-409 19-569 (611)
2 1nr0_A Actin interacting prote 100.0 4.6E-50 1.6E-54 376.4 44.3 323 7-406 144-610 (611)
3 2ymu_A WD-40 repeat protein; u 100.0 3.9E-49 1.3E-53 369.3 46.7 348 13-404 227-577 (577)
4 1vyh_C Platelet-activating fac 100.0 8.2E-50 2.8E-54 356.6 39.4 285 42-406 103-410 (410)
5 4g56_B MGC81050 protein; prote 100.0 5.1E-50 1.7E-54 351.1 33.9 319 8-407 6-343 (357)
6 3ow8_A WD repeat-containing pr 100.0 1E-48 3.5E-53 337.6 39.5 282 45-406 30-320 (321)
7 1got_B GT-beta; complex (GTP-b 100.0 6.7E-48 2.3E-52 336.0 43.1 283 43-404 51-340 (340)
8 2ymu_A WD-40 repeat protein; u 100.0 3E-47 1E-51 356.5 46.9 353 13-409 186-541 (577)
9 3ow8_A WD repeat-containing pr 100.0 6.8E-47 2.3E-51 326.3 39.3 281 5-365 27-320 (321)
10 1vyh_C Platelet-activating fac 100.0 2.3E-47 7.9E-52 340.8 37.4 279 7-365 105-410 (410)
11 2pbi_B Guanine nucleotide-bind 100.0 1.7E-46 5.9E-51 328.5 41.8 284 43-404 60-354 (354)
12 4gqb_B Methylosome protein 50; 100.0 8.2E-48 2.8E-52 334.2 33.1 297 30-409 16-333 (344)
13 1r5m_A SIR4-interacting protei 100.0 8E-47 2.8E-51 340.2 38.8 314 11-407 49-425 (425)
14 1gxr_A ESG1, transducin-like e 100.0 1.8E-46 6E-51 327.3 39.7 311 12-405 14-335 (337)
15 2ynn_A Coatomer subunit beta'; 100.0 3.4E-46 1.2E-50 319.9 40.2 286 43-408 9-303 (304)
16 3iz6_a 40S ribosomal protein R 100.0 1.1E-47 3.6E-52 339.8 31.7 308 29-409 47-377 (380)
17 1got_B GT-beta; complex (GTP-b 100.0 3.4E-46 1.2E-50 325.2 39.5 279 6-363 51-340 (340)
18 2pm9_A Protein WEB1, protein t 100.0 3.3E-48 1.1E-52 348.3 24.9 320 9-408 14-415 (416)
19 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.3E-45 4.3E-50 322.1 40.4 308 40-411 7-339 (345)
20 3frx_A Guanine nucleotide-bind 100.0 1.4E-45 4.9E-50 318.2 39.2 282 44-408 14-318 (319)
21 4ery_A WD repeat-containing pr 100.0 1E-44 3.5E-49 312.5 42.1 287 43-406 19-311 (312)
22 1pgu_A Actin interacting prote 100.0 8.4E-45 2.9E-49 342.6 45.1 388 11-412 22-578 (615)
23 2pbi_B Guanine nucleotide-bind 100.0 5.3E-45 1.8E-49 319.1 40.4 280 6-363 60-354 (354)
24 3sfz_A APAF-1, apoptotic pepti 100.0 2.2E-45 7.4E-50 372.7 43.5 394 8-413 613-1164(1249)
25 4gqb_B Methylosome protein 50; 100.0 7.1E-46 2.4E-50 322.1 34.3 280 8-369 31-334 (344)
26 1erj_A Transcriptional repress 100.0 7.7E-45 2.6E-49 323.0 40.5 314 26-407 38-389 (393)
27 2xzm_R RACK1; ribosome, transl 100.0 8.9E-45 3.1E-49 316.8 39.2 284 43-409 17-342 (343)
28 3vl1_A 26S proteasome regulato 100.0 2.2E-45 7.5E-50 330.3 34.2 317 12-407 61-419 (420)
29 2ynn_A Coatomer subunit beta'; 100.0 2.8E-44 9.4E-49 308.1 39.2 245 8-261 11-267 (304)
30 2oaj_A Protein SNI1; WD40 repe 100.0 9.2E-44 3.1E-48 345.2 46.2 390 6-411 13-609 (902)
31 3frx_A Guanine nucleotide-bind 100.0 5.1E-44 1.7E-48 308.5 39.1 288 6-367 13-318 (319)
32 1erj_A Transcriptional repress 100.0 5.4E-44 1.9E-48 317.5 40.1 280 8-367 62-390 (393)
33 4g56_B MGC81050 protein; prote 100.0 6.2E-45 2.1E-49 318.8 32.0 275 11-367 46-344 (357)
34 2hes_X YDR267CP; beta-propelle 100.0 9.3E-44 3.2E-48 308.3 39.0 295 38-407 4-328 (330)
35 3sfz_A APAF-1, apoptotic pepti 100.0 2.3E-43 7.9E-48 357.8 47.0 381 8-413 655-1213(1249)
36 3iz6_a 40S ribosomal protein R 100.0 1.5E-44 5.1E-49 319.6 31.7 289 6-368 62-377 (380)
37 3mkq_A Coatomer beta'-subunit; 100.0 4.3E-43 1.5E-47 341.4 44.9 246 7-261 10-267 (814)
38 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.5E-43 5.2E-48 309.0 36.5 296 6-371 11-340 (345)
39 4aow_A Guanine nucleotide-bind 100.0 4.1E-43 1.4E-47 306.5 38.7 287 43-409 34-339 (340)
40 4ery_A WD repeat-containing pr 100.0 8.2E-43 2.8E-47 300.6 39.8 281 7-365 20-311 (312)
41 2oaj_A Protein SNI1; WD40 repe 100.0 1.3E-43 4.6E-48 344.0 35.5 368 13-411 64-668 (902)
42 3zwl_B Eukaryotic translation 100.0 2.7E-42 9.4E-47 304.6 40.5 291 41-409 26-348 (369)
43 1pgu_A Actin interacting prote 100.0 2.9E-42 1E-46 325.2 42.3 315 13-407 166-614 (615)
44 2xzm_R RACK1; ribosome, transl 100.0 3.3E-42 1.1E-46 300.6 39.5 290 6-367 17-341 (343)
45 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.6E-41 5.3E-46 307.3 43.3 313 6-407 114-442 (445)
46 3ei3_B DNA damage-binding prot 100.0 4.5E-42 1.5E-46 304.8 37.6 303 34-407 59-382 (383)
47 2j04_B YDR362CP, TAU91; beta p 100.0 1.3E-43 4.4E-48 322.7 27.0 304 27-408 182-518 (524)
48 1k8k_C P40, ARP2/3 complex 41 100.0 2.2E-42 7.7E-47 305.6 32.5 283 46-409 7-363 (372)
49 1sq9_A Antiviral protein SKI8; 100.0 3.9E-42 1.3E-46 306.8 33.5 295 45-409 14-397 (397)
50 2hes_X YDR267CP; beta-propelle 100.0 2.2E-41 7.4E-46 293.5 37.1 280 6-366 10-328 (330)
51 3dm0_A Maltose-binding peripla 100.0 2.2E-41 7.4E-46 322.8 40.1 282 43-406 378-692 (694)
52 3v7d_B Cell division control p 100.0 3.7E-41 1.3E-45 306.7 39.7 311 7-405 118-461 (464)
53 3gre_A Serine/threonine-protei 100.0 2E-42 6.8E-47 312.6 30.1 328 13-404 33-437 (437)
54 4aow_A Guanine nucleotide-bind 100.0 1.1E-40 3.9E-45 291.0 40.1 290 6-368 34-339 (340)
55 1gxr_A ESG1, transducin-like e 100.0 1E-40 3.6E-45 290.8 38.7 276 8-365 49-336 (337)
56 1r5m_A SIR4-interacting protei 100.0 3.2E-41 1.1E-45 303.6 36.4 298 30-409 27-363 (425)
57 4h5i_A Guanine nucleotide-exch 100.0 2.9E-41 9.8E-46 296.4 33.5 290 44-407 11-343 (365)
58 3i2n_A WD repeat-containing pr 100.0 2.7E-41 9.2E-46 297.0 32.7 292 44-410 15-356 (357)
59 3zwl_B Eukaryotic translation 100.0 3.2E-40 1.1E-44 291.4 39.1 283 6-370 28-350 (369)
60 4gga_A P55CDC, cell division c 100.0 4.4E-40 1.5E-44 295.2 40.5 281 11-373 109-402 (420)
61 3odt_A Protein DOA1; ubiquitin 100.0 2.5E-40 8.5E-45 285.4 37.4 285 39-412 9-301 (313)
62 4aez_A CDC20, WD repeat-contai 100.0 2.4E-40 8.1E-45 295.2 36.9 282 50-416 96-389 (401)
63 4e54_B DNA damage-binding prot 100.0 2E-41 6.9E-46 305.3 29.4 304 44-411 116-434 (435)
64 3dwl_C Actin-related protein 2 100.0 4.5E-42 1.6E-46 304.2 23.3 278 46-405 10-377 (377)
65 3k26_A Polycomb protein EED; W 100.0 2.4E-41 8.1E-46 298.3 27.6 296 45-406 16-365 (366)
66 3mkq_A Coatomer beta'-subunit; 100.0 2.4E-40 8.3E-45 322.1 36.2 369 13-413 61-466 (814)
67 4aez_A CDC20, WD repeat-contai 100.0 3.1E-39 1.1E-43 288.0 39.8 281 13-373 99-387 (401)
68 4a11_B DNA excision repair pro 100.0 1.7E-40 5.9E-45 297.2 30.7 312 28-412 23-370 (408)
69 1sq9_A Antiviral protein SKI8; 100.0 8E-40 2.7E-44 291.9 34.7 299 7-368 13-397 (397)
70 2pm9_A Protein WEB1, protein t 100.0 6.8E-41 2.3E-45 300.7 26.6 287 46-410 11-340 (416)
71 3dm0_A Maltose-binding peripla 100.0 2.7E-39 9.3E-44 308.3 38.7 297 6-365 378-692 (694)
72 3vl1_A 26S proteasome regulato 100.0 1.1E-40 3.8E-45 299.7 27.5 281 48-407 57-365 (420)
73 1k8k_C P40, ARP2/3 complex 41 100.0 1.3E-39 4.6E-44 287.8 33.8 313 10-368 11-363 (372)
74 3k26_A Polycomb protein EED; W 100.0 4.6E-40 1.6E-44 290.1 30.4 283 8-366 16-366 (366)
75 3ei3_B DNA damage-binding prot 100.0 1.8E-39 6.1E-44 288.1 34.0 278 8-366 71-382 (383)
76 4ggc_A P55CDC, cell division c 100.0 3.4E-38 1.2E-42 272.6 40.1 276 11-368 29-317 (318)
77 4h5i_A Guanine nucleotide-exch 100.0 4E-40 1.4E-44 289.1 27.6 279 12-367 19-344 (365)
78 3i2n_A WD repeat-containing pr 100.0 1.4E-39 4.8E-44 286.0 31.1 300 8-369 16-356 (357)
79 3v7d_B Cell division control p 100.0 2.5E-38 8.4E-43 288.1 39.4 284 42-413 116-427 (464)
80 4gga_A P55CDC, cell division c 100.0 2E-38 7E-43 284.4 37.7 275 49-408 107-396 (420)
81 3odt_A Protein DOA1; ubiquitin 100.0 4.1E-38 1.4E-42 271.5 37.1 279 6-374 14-304 (313)
82 3dw8_B Serine/threonine-protei 100.0 5.5E-39 1.9E-43 291.1 32.6 296 44-406 25-445 (447)
83 4e54_B DNA damage-binding prot 100.0 2E-39 6.9E-44 292.2 26.6 282 11-370 123-434 (435)
84 2pm7_B Protein transport prote 100.0 2E-38 6.7E-43 270.8 31.0 252 84-410 3-289 (297)
85 1yfq_A Cell cycle arrest prote 100.0 1.1E-38 3.7E-43 278.7 29.9 285 45-405 9-322 (342)
86 3gre_A Serine/threonine-protei 100.0 1.6E-38 5.4E-43 287.1 31.6 314 7-363 60-437 (437)
87 4a11_B DNA excision repair pro 100.0 2.9E-38 1E-42 282.7 32.9 319 8-407 41-405 (408)
88 4ggc_A P55CDC, cell division c 100.0 3E-37 1E-41 266.7 37.0 274 50-408 28-316 (318)
89 3mmy_A MRNA export factor; mRN 100.0 4.3E-38 1.5E-42 277.6 32.0 303 33-405 24-344 (368)
90 3dwl_C Actin-related protein 2 100.0 1.9E-39 6.7E-44 287.3 22.4 233 10-253 14-281 (377)
91 2j04_A TAU60, YPL007P, hypothe 100.0 1.7E-38 5.9E-43 281.8 27.3 217 10-256 18-257 (588)
92 1l0q_A Surface layer protein; 100.0 1.3E-35 4.6E-40 264.0 45.3 316 21-416 4-351 (391)
93 2pm7_B Protein transport prote 100.0 3.4E-37 1.1E-41 263.2 32.5 248 44-366 6-285 (297)
94 1p22_A F-BOX/WD-repeat protein 100.0 2.2E-37 7.7E-42 279.0 33.0 273 46-412 132-419 (435)
95 3dw8_B Serine/threonine-protei 100.0 2.2E-37 7.4E-42 280.6 32.5 237 13-258 34-378 (447)
96 3bws_A Protein LP49; two-domai 100.0 1.9E-36 6.4E-41 273.2 38.5 315 15-407 71-432 (433)
97 3f3f_A Nucleoporin SEH1; struc 100.0 4.1E-37 1.4E-41 269.3 31.5 286 44-409 8-339 (351)
98 3bg1_A Protein SEC13 homolog; 100.0 1.6E-37 5.6E-42 267.4 28.0 245 85-406 8-292 (316)
99 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.5E-36 1.2E-40 272.2 38.0 277 43-412 114-396 (445)
100 1p22_A F-BOX/WD-repeat protein 100.0 7.2E-37 2.5E-41 275.7 33.2 291 13-386 137-434 (435)
101 1yfq_A Cell cycle arrest prote 100.0 6.2E-37 2.1E-41 267.5 31.2 273 7-363 8-321 (342)
102 2aq5_A Coronin-1A; WD40 repeat 100.0 2.5E-37 8.5E-42 276.0 28.3 285 49-412 36-347 (402)
103 2aq5_A Coronin-1A; WD40 repeat 100.0 1E-36 3.4E-41 272.1 30.5 281 13-370 40-346 (402)
104 2j04_B YDR362CP, TAU91; beta p 100.0 8.3E-38 2.8E-42 284.6 23.9 274 39-391 125-458 (524)
105 3bg1_A Protein SEC13 homolog; 100.0 5.9E-37 2E-41 263.9 27.8 246 44-365 10-292 (316)
106 3jrp_A Fusion protein of prote 100.0 1.4E-36 4.7E-41 269.2 30.1 251 81-406 2-286 (379)
107 3vu4_A KMHSV2; beta-propeller 100.0 9.6E-36 3.3E-40 260.5 33.0 290 32-407 3-336 (355)
108 1nir_A Nitrite reductase; hemo 100.0 1.6E-34 5.4E-39 265.2 38.4 323 13-413 143-520 (543)
109 2j04_A TAU60, YPL007P, hypothe 100.0 4.7E-37 1.6E-41 272.7 20.6 262 46-406 14-296 (588)
110 2vdu_B TRNA (guanine-N(7)-)-me 100.0 8.8E-35 3E-39 263.2 35.2 236 11-254 8-342 (450)
111 3jrp_A Fusion protein of prote 100.0 3.3E-35 1.1E-39 260.3 31.4 249 43-366 7-287 (379)
112 1l0q_A Surface layer protein; 100.0 6.6E-34 2.3E-38 253.1 39.8 270 61-412 4-280 (391)
113 2vdu_B TRNA (guanine-N(7)-)-me 100.0 5.2E-35 1.8E-39 264.7 31.6 306 48-410 5-396 (450)
114 3f3f_A Nucleoporin SEH1; struc 100.0 4.5E-35 1.5E-39 256.3 29.4 287 7-373 8-344 (351)
115 3mmy_A MRNA export factor; mRN 100.0 3.1E-34 1.1E-38 252.9 31.9 278 7-365 36-345 (368)
116 3bws_A Protein LP49; two-domai 100.0 5.2E-33 1.8E-37 250.7 39.2 277 12-366 127-432 (433)
117 2xyi_A Probable histone-bindin 100.0 9.2E-34 3.2E-38 254.8 32.8 246 84-408 122-411 (430)
118 3lrv_A PRE-mRNA-splicing facto 100.0 3.1E-34 1E-38 250.2 28.7 267 57-409 46-335 (343)
119 3vu4_A KMHSV2; beta-propeller 100.0 3.7E-33 1.3E-37 244.1 33.2 228 13-255 25-273 (355)
120 3jro_A Fusion protein of prote 100.0 2.7E-34 9.4E-39 275.3 28.3 249 84-407 3-285 (753)
121 2xyi_A Probable histone-bindin 100.0 2.4E-33 8.1E-38 252.1 32.4 261 41-367 122-411 (430)
122 2w18_A PALB2, fancn, partner a 100.0 5E-33 1.7E-37 232.0 31.7 272 21-405 56-355 (356)
123 3jro_A Fusion protein of prote 100.0 5.2E-34 1.8E-38 273.3 29.7 248 44-366 6-285 (753)
124 2hqs_A Protein TOLB; TOLB, PAL 100.0 9.9E-33 3.4E-37 246.1 34.6 300 13-389 68-410 (415)
125 4gq1_A NUP37; propeller, trans 100.0 4.4E-34 1.5E-38 253.5 25.4 308 19-406 31-388 (393)
126 2ecf_A Dipeptidyl peptidase IV 100.0 2.8E-32 9.5E-37 262.5 39.3 327 12-413 41-465 (741)
127 1k32_A Tricorn protease; prote 100.0 2.9E-31 9.9E-36 263.6 39.5 359 13-415 20-469 (1045)
128 2hqs_A Protein TOLB; TOLB, PAL 100.0 3.9E-32 1.3E-36 242.3 28.8 295 48-416 63-396 (415)
129 1nir_A Nitrite reductase; hemo 100.0 1.2E-30 4E-35 239.5 36.4 298 12-375 183-523 (543)
130 3lrv_A PRE-mRNA-splicing facto 100.0 3.5E-32 1.2E-36 237.2 24.9 227 98-407 44-292 (343)
131 2z3z_A Dipeptidyl aminopeptida 100.0 1.3E-30 4.6E-35 249.4 36.2 318 12-409 30-437 (706)
132 1k32_A Tricorn protease; prote 100.0 1.2E-30 4.1E-35 259.2 36.5 355 13-409 250-639 (1045)
133 4gq1_A NUP37; propeller, trans 100.0 6.9E-32 2.4E-36 239.4 21.7 249 13-365 95-388 (393)
134 1xfd_A DIP, dipeptidyl aminope 100.0 7.6E-31 2.6E-35 251.9 29.5 324 11-407 20-443 (723)
135 3u4y_A Uncharacterized protein 100.0 4.9E-29 1.7E-33 216.4 37.6 237 13-256 3-255 (331)
136 3u4y_A Uncharacterized protein 100.0 2.1E-28 7E-33 212.5 36.4 286 53-413 3-310 (331)
137 2z3z_A Dipeptidyl aminopeptida 100.0 1.4E-28 5E-33 235.3 36.7 297 11-386 85-454 (706)
138 3vgz_A Uncharacterized protein 100.0 1.5E-27 5E-32 209.1 39.4 241 13-261 46-311 (353)
139 2w18_A PALB2, fancn, partner a 100.0 8E-29 2.7E-33 206.8 29.4 218 46-364 110-355 (356)
140 1pby_B Quinohemoprotein amine 100.0 3.4E-28 1.2E-32 211.6 33.9 272 20-374 2-318 (337)
141 2ecf_A Dipeptidyl peptidase IV 100.0 3.6E-29 1.2E-33 240.9 29.4 286 47-406 36-412 (741)
142 3vgz_A Uncharacterized protein 100.0 1.5E-27 5.2E-32 209.0 36.8 279 43-398 36-335 (353)
143 1ri6_A Putative isomerase YBHE 100.0 2E-27 6.8E-32 207.3 36.7 293 20-389 5-335 (343)
144 1pby_B Quinohemoprotein amine 100.0 4.2E-28 1.4E-32 211.0 29.9 271 60-411 2-314 (337)
145 1z68_A Fibroblast activation p 100.0 6E-29 2.1E-33 238.4 24.7 322 12-411 20-447 (719)
146 1xfd_A DIP, dipeptidyl aminope 100.0 6.9E-29 2.4E-33 238.3 23.0 283 48-406 17-392 (723)
147 1ri6_A Putative isomerase YBHE 100.0 1.8E-26 6.2E-31 201.2 34.6 284 59-411 4-314 (343)
148 2ojh_A Uncharacterized protein 100.0 9.1E-27 3.1E-31 198.7 27.7 221 27-256 21-261 (297)
149 1jmx_B Amine dehydrogenase; ox 100.0 3E-26 1E-30 200.3 31.0 282 12-374 4-333 (349)
150 3o4h_A Acylamino-acid-releasin 100.0 2.9E-27 9.8E-32 221.1 25.4 284 47-413 21-320 (582)
151 3o4h_A Acylamino-acid-releasin 100.0 3E-27 1E-31 220.9 24.0 231 13-257 27-278 (582)
152 2ojh_A Uncharacterized protein 100.0 1.3E-26 4.3E-31 197.8 25.3 253 69-398 21-293 (297)
153 3pe7_A Oligogalacturonate lyas 100.0 6.1E-26 2.1E-30 201.4 29.0 306 33-406 15-381 (388)
154 4a5s_A Dipeptidyl peptidase 4 99.9 6.4E-25 2.2E-29 210.5 34.7 243 10-256 19-356 (740)
155 1jmx_B Amine dehydrogenase; ox 99.9 8E-25 2.7E-29 191.3 31.8 281 52-411 4-329 (349)
156 3hfq_A Uncharacterized protein 99.9 4.3E-24 1.5E-28 186.5 34.7 228 21-253 4-271 (347)
157 3hfq_A Uncharacterized protein 99.9 4.2E-24 1.4E-28 186.6 33.6 283 61-412 4-324 (347)
158 3c5m_A Oligogalacturonate lyas 99.9 2E-25 6.8E-30 198.7 22.7 305 10-411 38-388 (396)
159 3scy_A Hypothetical bacterial 99.9 8E-23 2.7E-27 179.4 36.9 294 15-385 9-360 (361)
160 3pe7_A Oligogalacturonate lyas 99.9 2E-24 7E-29 191.6 25.7 243 13-257 41-333 (388)
161 1z68_A Fibroblast activation p 99.9 4.6E-25 1.6E-29 211.5 21.9 283 51-406 19-390 (719)
162 3scy_A Hypothetical bacterial 99.9 2.6E-22 8.9E-27 176.2 35.7 288 57-414 11-346 (361)
163 1jof_A Carboxy-CIS,CIS-muconat 99.9 9.2E-23 3.2E-27 179.0 30.0 288 61-410 4-344 (365)
164 3azo_A Aminopeptidase; POP fam 99.9 1.7E-22 5.7E-27 191.9 31.9 238 13-255 29-327 (662)
165 2oiz_A Aromatic amine dehydrog 99.9 4.5E-22 1.5E-26 173.7 31.5 291 17-389 13-360 (361)
166 4a5s_A Dipeptidyl peptidase 4 99.9 1.2E-22 4.1E-27 194.8 29.9 289 48-409 17-402 (740)
167 1qks_A Cytochrome CD1 nitrite 99.9 1.9E-20 6.6E-25 171.3 40.7 325 14-412 160-543 (567)
168 1jof_A Carboxy-CIS,CIS-muconat 99.9 2.5E-22 8.5E-27 176.3 26.4 239 12-254 44-342 (365)
169 2gop_A Trilobed protease; beta 99.9 5E-21 1.7E-25 167.1 33.7 271 47-414 14-337 (347)
170 2oit_A Nucleoporin 214KDA; NH2 99.9 1.8E-21 6.1E-26 174.0 30.9 237 10-252 39-332 (434)
171 2gop_A Trilobed protease; beta 99.9 6E-21 2E-25 166.6 32.5 221 13-256 20-294 (347)
172 2oit_A Nucleoporin 214KDA; NH2 99.9 1.4E-20 4.9E-25 168.1 29.7 213 28-254 23-279 (434)
173 3azo_A Aminopeptidase; POP fam 99.9 7E-21 2.4E-25 180.8 27.6 303 45-413 21-375 (662)
174 2oiz_A Aromatic amine dehydrog 99.9 3.9E-20 1.3E-24 161.5 27.0 287 58-413 14-342 (361)
175 2xdw_A Prolyl endopeptidase; a 99.9 3.2E-19 1.1E-23 170.4 35.3 282 16-368 80-416 (710)
176 3c5m_A Oligogalacturonate lyas 99.9 7.9E-21 2.7E-25 168.9 22.6 266 72-413 12-335 (396)
177 1qks_A Cytochrome CD1 nitrite 99.9 5E-18 1.7E-22 155.4 40.1 298 12-374 201-546 (567)
178 3fvz_A Peptidyl-glycine alpha- 99.9 2.4E-19 8.3E-24 154.8 28.1 245 90-407 23-322 (329)
179 1q7f_A NHL, brain tumor CG1071 99.9 2.1E-18 7.2E-23 146.0 32.1 242 88-408 27-281 (286)
180 1q7f_A NHL, brain tumor CG1071 99.9 2.5E-18 8.6E-23 145.6 32.2 232 13-254 35-281 (286)
181 2xdw_A Prolyl endopeptidase; a 99.9 1.1E-18 3.9E-23 166.5 32.4 280 57-409 81-416 (710)
182 3sjl_D Methylamine dehydrogena 99.9 1.9E-18 6.4E-23 148.4 29.6 293 13-387 38-384 (386)
183 2bkl_A Prolyl endopeptidase; m 99.9 6.1E-19 2.1E-23 167.9 28.7 234 14-252 74-348 (695)
184 3dsm_A Uncharacterized protein 99.8 1.3E-17 4.5E-22 143.6 34.0 276 27-384 16-319 (328)
185 3fvz_A Peptidyl-glycine alpha- 99.8 1.4E-18 4.7E-23 150.0 27.6 239 8-253 24-322 (329)
186 2dg1_A DRP35, lactonase; beta 99.8 1.4E-18 4.9E-23 150.5 26.3 278 48-397 6-300 (333)
187 2bkl_A Prolyl endopeptidase; m 99.8 1.5E-18 5.3E-23 165.1 26.6 282 56-411 76-401 (695)
188 2mad_H Methylamine dehydrogena 99.8 4.3E-16 1.5E-20 135.9 37.6 277 13-372 26-356 (373)
189 3dsm_A Uncharacterized protein 99.8 9E-17 3.1E-21 138.4 32.9 259 69-411 16-305 (328)
190 2mad_H Methylamine dehydrogena 99.8 2.2E-16 7.5E-21 137.8 35.6 292 54-413 27-356 (373)
191 2dg1_A DRP35, lactonase; beta 99.8 2E-17 7E-22 143.2 29.1 243 10-260 8-269 (333)
192 1yr2_A Prolyl oligopeptidase; 99.8 3.6E-17 1.2E-21 156.8 31.0 234 14-252 113-392 (741)
193 1yr2_A Prolyl oligopeptidase; 99.8 2.8E-17 9.7E-22 157.5 29.6 283 56-413 115-447 (741)
194 2z2n_A Virginiamycin B lyase; 99.8 2.2E-15 7.5E-20 128.2 37.6 279 46-409 13-297 (299)
195 3c75_H MADH, methylamine dehyd 99.8 1E-16 3.5E-21 140.3 29.4 276 16-373 81-409 (426)
196 3e5z_A Putative gluconolactona 99.8 2.4E-16 8.3E-21 134.0 31.0 207 41-260 21-252 (296)
197 3e5z_A Putative gluconolactona 99.8 1.2E-16 4E-21 136.0 28.8 231 12-256 32-289 (296)
198 2z2n_A Virginiamycin B lyase; 99.8 5.2E-15 1.8E-19 125.9 36.9 228 11-251 18-253 (299)
199 3sjl_D Methylamine dehydrogena 99.8 3E-16 1E-20 134.8 27.9 289 53-412 38-368 (386)
200 3c75_H MADH, methylamine dehyd 99.8 4E-16 1.4E-20 136.6 26.4 287 57-413 82-408 (426)
201 1rwi_B Serine/threonine-protei 99.8 4.2E-16 1.4E-20 130.7 25.8 236 12-256 28-267 (270)
202 3no2_A Uncharacterized protein 99.8 2.6E-15 8.8E-20 125.5 30.2 232 18-261 4-260 (276)
203 2qc5_A Streptogramin B lactona 99.8 1.1E-14 3.7E-19 124.0 34.6 276 46-406 18-299 (300)
204 3no2_A Uncharacterized protein 99.8 1E-15 3.4E-20 128.0 26.6 214 101-395 4-231 (276)
205 1rwi_B Serine/threonine-protei 99.8 6.1E-16 2.1E-20 129.7 25.3 240 92-410 25-267 (270)
206 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 1.4E-14 4.7E-19 124.3 28.7 233 11-253 21-299 (314)
207 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 2.2E-14 7.4E-19 123.0 29.2 245 87-407 14-299 (314)
208 3hrp_A Uncharacterized protein 99.7 6.3E-14 2.2E-18 124.0 30.5 233 11-251 134-408 (409)
209 3iuj_A Prolyl endopeptidase; h 99.7 8.9E-15 3E-19 139.0 25.9 239 13-256 134-408 (693)
210 1mda_H Methylamine dehydrogena 99.7 5.6E-15 1.9E-19 127.3 22.1 279 18-386 30-366 (368)
211 3hrp_A Uncharacterized protein 99.7 9.6E-14 3.3E-18 122.9 30.0 252 91-406 131-409 (409)
212 3g4e_A Regucalcin; six bladed 99.7 4.1E-13 1.4E-17 113.9 32.5 228 91-395 13-260 (297)
213 3g4e_A Regucalcin; six bladed 99.7 2.6E-13 9.1E-18 115.1 30.3 222 11-242 16-261 (297)
214 2qc5_A Streptogramin B lactona 99.7 1.8E-12 6.2E-17 110.1 35.5 228 12-251 24-258 (300)
215 2ghs_A AGR_C_1268P; regucalcin 99.7 4.1E-13 1.4E-17 115.4 31.5 220 12-243 53-292 (326)
216 3dr2_A Exported gluconolactona 99.6 4.6E-13 1.6E-17 114.1 28.8 237 81-398 35-298 (305)
217 1mda_H Methylamine dehydrogena 99.6 2.8E-14 9.5E-19 123.0 20.9 278 58-412 30-351 (368)
218 3iuj_A Prolyl endopeptidase; h 99.6 1.1E-13 3.8E-18 131.5 26.7 248 89-412 127-410 (693)
219 2ghs_A AGR_C_1268P; regucalcin 99.6 4.2E-12 1.4E-16 109.1 34.1 225 93-396 51-291 (326)
220 1xip_A Nucleoporin NUP159; bet 99.6 4.2E-14 1.4E-18 122.1 21.4 174 9-198 39-234 (388)
221 3dr2_A Exported gluconolactona 99.6 6.5E-13 2.2E-17 113.2 27.1 226 12-250 49-303 (305)
222 1fwx_A Nitrous oxide reductase 99.6 7.9E-13 2.7E-17 118.4 26.3 273 51-410 88-434 (595)
223 2qe8_A Uncharacterized protein 99.6 2.7E-13 9.2E-18 117.5 22.9 276 48-403 17-317 (343)
224 1kb0_A Quinohemoprotein alcoho 99.6 1.1E-12 3.8E-17 123.5 28.5 224 19-249 77-419 (677)
225 1yiq_A Quinohemoprotein alcoho 99.6 1.4E-12 4.9E-17 123.0 28.6 342 19-395 70-537 (689)
226 1npe_A Nidogen, entactin; glyc 99.6 2.8E-11 9.5E-16 100.9 32.3 237 19-261 1-246 (267)
227 2ece_A 462AA long hypothetical 99.6 1.7E-11 5.8E-16 106.1 30.7 243 99-395 90-399 (462)
228 3hxj_A Pyrrolo-quinoline quino 99.5 1.6E-12 5.4E-17 112.2 22.5 298 13-408 25-325 (330)
229 3q7m_A Lipoprotein YFGL, BAMB; 99.5 6E-11 2E-15 104.3 33.0 294 18-404 52-375 (376)
230 1npe_A Nidogen, entactin; glyc 99.5 1.8E-10 6.1E-15 96.0 32.5 191 59-254 1-199 (267)
231 1fwx_A Nitrous oxide reductase 99.5 7.7E-14 2.6E-18 124.9 12.3 214 13-253 90-361 (595)
232 1kb0_A Quinohemoprotein alcoho 99.5 5.7E-12 2E-16 118.7 25.3 309 59-411 77-511 (677)
233 2ece_A 462AA long hypothetical 99.5 5.3E-11 1.8E-15 103.0 27.7 224 14-241 88-399 (462)
234 1xip_A Nucleoporin NUP159; bet 99.5 1.4E-12 4.7E-17 112.7 18.0 173 49-241 39-232 (388)
235 1yiq_A Quinohemoprotein alcoho 99.5 1.3E-11 4.5E-16 116.5 26.0 316 59-411 70-509 (689)
236 2qe8_A Uncharacterized protein 99.5 9E-12 3.1E-16 107.9 21.5 232 12-248 21-316 (343)
237 2hz6_A Endoplasmic reticulum t 99.4 4.6E-15 1.6E-19 129.6 -2.7 186 58-261 8-200 (369)
238 1ijq_A LDL receptor, low-densi 99.4 4.5E-09 1.5E-13 89.6 33.4 239 20-261 2-246 (316)
239 3q7m_A Lipoprotein YFGL, BAMB; 99.4 9.1E-10 3.1E-14 96.7 29.0 264 59-411 53-341 (376)
240 2iwa_A Glutamine cyclotransfer 99.4 5.9E-10 2E-14 90.8 25.2 207 38-254 9-238 (266)
241 4a2l_A BT_4663, two-component 99.4 1.7E-08 5.9E-13 97.6 40.1 315 13-410 178-529 (795)
242 2iwa_A Glutamine cyclotransfer 99.4 2.5E-10 8.7E-15 92.9 21.3 189 12-208 25-235 (266)
243 3v65_B Low-density lipoprotein 99.3 3.6E-09 1.2E-13 92.8 29.5 239 19-261 87-326 (386)
244 3v64_C Agrin; beta propeller, 99.3 9E-09 3.1E-13 88.9 31.4 239 19-261 44-283 (349)
245 3s94_A LRP-6, low-density lipo 99.3 1.7E-07 6E-12 87.0 40.5 237 20-260 10-250 (619)
246 1kv9_A Type II quinohemoprotei 99.3 1.9E-09 6.4E-14 101.6 27.7 195 59-261 66-341 (668)
247 2fp8_A Strictosidine synthase; 99.3 1.1E-08 3.7E-13 87.7 30.4 237 9-253 20-313 (322)
248 2hz6_A Endoplasmic reticulum t 99.3 3.4E-12 1.2E-16 111.5 8.5 221 18-255 8-238 (369)
249 4a2l_A BT_4663, two-component 99.3 4.2E-08 1.4E-12 95.0 37.6 321 13-414 93-443 (795)
250 3p5b_L Low density lipoprotein 99.3 3.7E-08 1.3E-12 86.7 33.5 240 19-261 83-328 (400)
251 3hxj_A Pyrrolo-quinoline quino 99.3 7.4E-11 2.5E-15 101.7 16.0 264 52-412 24-289 (330)
252 1kv9_A Type II quinohemoprotei 99.3 7E-09 2.4E-13 97.7 29.6 194 19-217 66-341 (668)
253 2ad6_A Methanol dehydrogenase 99.3 6.1E-09 2.1E-13 96.0 27.8 191 20-218 63-344 (571)
254 3nol_A Glutamine cyclotransfer 99.3 4.5E-09 1.5E-13 84.5 23.3 194 39-243 32-245 (262)
255 1flg_A Protein (quinoprotein e 99.3 3.7E-08 1.3E-12 90.9 32.4 197 18-219 68-365 (582)
256 4a0p_A LRP6, LRP-6, low-densit 99.2 1.6E-06 5.3E-11 80.8 45.1 236 19-260 6-244 (628)
257 3nok_A Glutaminyl cyclase; bet 99.2 1.1E-08 3.8E-13 82.1 24.0 191 39-242 44-254 (268)
258 2fp8_A Strictosidine synthase; 99.2 6.6E-08 2.2E-12 82.8 30.7 204 48-260 19-275 (322)
259 2p4o_A Hypothetical protein; p 99.2 1.2E-07 4.1E-12 80.5 31.4 223 12-243 36-278 (306)
260 1w6s_A Methanol dehydrogenase 99.2 3.1E-08 1E-12 91.3 29.3 192 20-217 63-350 (599)
261 2ad6_A Methanol dehydrogenase 99.2 1.8E-08 6.2E-13 92.9 27.8 198 59-261 62-343 (571)
262 1w6s_A Methanol dehydrogenase 99.2 2.3E-08 7.7E-13 92.2 28.1 199 59-261 62-350 (599)
263 3nol_A Glutamine cyclotransfer 99.2 3.9E-09 1.3E-13 84.8 19.8 174 13-195 48-242 (262)
264 3sov_A LRP-6, low-density lipo 99.2 9.1E-08 3.1E-12 81.3 29.4 238 20-261 5-246 (318)
265 3v9f_A Two-component system se 99.2 1.1E-06 3.8E-11 84.9 39.4 316 13-413 168-530 (781)
266 2xe4_A Oligopeptidase B; hydro 99.2 1.5E-08 5.2E-13 97.0 25.8 198 49-251 175-398 (751)
267 1ijq_A LDL receptor, low-densi 99.2 1.4E-06 4.8E-11 74.1 35.0 187 61-253 3-195 (316)
268 1k3i_A Galactose oxidase precu 99.2 2.1E-08 7.1E-13 94.7 25.7 241 13-254 191-498 (656)
269 3tc9_A Hypothetical hydrolase; 99.1 1.3E-07 4.6E-12 84.0 29.3 238 9-252 138-429 (430)
270 1flg_A Protein (quinoprotein e 99.1 1.8E-07 6.3E-12 86.3 31.0 199 59-261 68-363 (582)
271 3mbr_X Glutamine cyclotransfer 99.1 1.1E-07 3.7E-12 75.8 25.3 193 39-242 10-223 (243)
272 3v64_C Agrin; beta propeller, 99.1 6.1E-07 2.1E-11 77.5 32.2 197 50-253 36-234 (349)
273 2xe4_A Oligopeptidase B; hydro 99.1 1.2E-08 4.2E-13 97.6 23.6 238 12-255 178-460 (751)
274 3m0c_C LDL receptor, low-densi 99.1 3.5E-07 1.2E-11 87.0 32.9 238 20-261 396-640 (791)
275 3v9f_A Two-component system se 99.1 1.4E-06 4.7E-11 84.2 37.7 318 13-412 216-573 (781)
276 2p4o_A Hypothetical protein; p 99.1 1.3E-07 4.3E-12 80.4 27.1 206 38-256 22-244 (306)
277 3v65_B Low-density lipoprotein 99.1 6.8E-07 2.3E-11 78.3 32.3 196 51-253 80-277 (386)
278 1k3i_A Galactose oxidase precu 99.1 5.7E-08 2E-12 91.7 26.6 120 51-170 189-327 (656)
279 3tc9_A Hypothetical hydrolase; 99.1 2.4E-07 8.1E-12 82.4 27.7 158 92-252 138-300 (430)
280 4hw6_A Hypothetical protein, I 99.1 3.6E-07 1.2E-11 81.2 28.0 236 10-252 141-432 (433)
281 3p5b_L Low density lipoprotein 99.1 5E-06 1.7E-10 73.2 35.0 188 60-253 84-277 (400)
282 3nok_A Glutaminyl cyclase; bet 99.1 1.6E-08 5.6E-13 81.2 17.2 172 13-195 60-252 (268)
283 3mbr_X Glutamine cyclotransfer 99.1 9.9E-08 3.4E-12 76.1 21.5 174 13-195 26-221 (243)
284 1n7d_A LDL receptor, low-densi 99.0 4.6E-09 1.6E-13 99.2 15.1 238 21-261 379-622 (699)
285 4hw6_A Hypothetical protein, I 99.0 1.1E-06 3.7E-11 78.2 29.0 157 92-252 140-303 (433)
286 3sov_A LRP-6, low-density lipo 99.0 3.3E-06 1.1E-10 71.7 30.0 188 61-253 6-197 (318)
287 3qqz_A Putative uncharacterize 99.0 1.9E-06 6.7E-11 69.7 26.3 200 47-251 26-251 (255)
288 3s94_A LRP-6, low-density lipo 99.0 2.8E-05 9.6E-10 72.3 37.6 155 12-170 88-247 (619)
289 3kya_A Putative phosphatase; s 98.9 1.3E-06 4.6E-11 77.6 26.1 243 11-259 142-481 (496)
290 3kya_A Putative phosphatase; s 98.9 3.1E-06 1.1E-10 75.3 26.8 159 92-252 140-340 (496)
291 3m0c_C LDL receptor, low-densi 98.8 3.8E-05 1.3E-09 73.2 34.0 187 61-253 397-589 (791)
292 3qqz_A Putative uncharacterize 98.8 1.9E-05 6.5E-10 63.9 25.7 189 11-208 30-251 (255)
293 4a0p_A LRP6, LRP-6, low-densit 98.8 0.00014 4.6E-09 67.8 43.9 196 13-214 42-242 (628)
294 3s25_A Hypothetical 7-bladed b 98.7 3.4E-05 1.2E-09 64.7 26.4 213 15-252 21-254 (302)
295 1n7d_A LDL receptor, low-densi 98.7 3.1E-07 1E-11 86.8 14.0 180 70-253 386-571 (699)
296 3ei3_A DNA damage-binding prot 98.6 0.00056 1.9E-08 68.2 37.5 214 18-243 522-757 (1158)
297 2ism_A Putative oxidoreductase 98.6 0.00018 6.3E-09 62.0 31.0 143 89-239 29-219 (352)
298 2xzh_A Clathrin heavy chain 1; 98.6 0.00017 5.8E-09 59.5 29.9 237 13-256 72-335 (365)
299 3amr_A 3-phytase; beta-propell 98.6 5.8E-05 2E-09 63.5 23.2 193 59-261 40-272 (355)
300 2xbg_A YCF48-like protein; pho 98.5 0.00028 9.7E-09 60.2 30.9 216 13-246 41-272 (327)
301 3s25_A Hypothetical 7-bladed b 98.5 8E-05 2.7E-09 62.4 24.0 213 14-250 59-290 (302)
302 2xbg_A YCF48-like protein; pho 98.5 0.00037 1.3E-08 59.4 34.4 272 46-405 34-320 (327)
303 1bpo_A Protein (clathrin); cla 98.5 0.00055 1.9E-08 58.9 28.6 237 13-256 71-334 (494)
304 3amr_A 3-phytase; beta-propell 98.5 0.00023 7.8E-09 59.9 24.2 183 27-217 49-272 (355)
305 2ism_A Putative oxidoreductase 98.4 0.00095 3.2E-08 57.5 28.1 149 46-198 29-222 (352)
306 2p9w_A MAL S 1 allergenic prot 98.3 0.00053 1.8E-08 57.2 23.2 160 3-166 8-215 (334)
307 3sre_A PON1, serum paraoxonase 98.3 0.00056 1.9E-08 58.4 23.0 218 13-237 55-328 (355)
308 3a9g_A Putative uncharacterize 98.3 0.0014 4.7E-08 56.5 25.6 226 11-241 32-330 (354)
309 2p9w_A MAL S 1 allergenic prot 98.2 0.00018 6.3E-09 59.9 18.5 159 92-252 14-214 (334)
310 1bpo_A Protein (clathrin); cla 98.2 0.0021 7.1E-08 55.5 31.3 266 70-409 48-333 (494)
311 2xzh_A Clathrin heavy chain 1; 98.2 0.0016 5.3E-08 53.9 32.8 265 70-409 49-334 (365)
312 2vpj_A Kelch-like protein 12; 98.2 0.0007 2.4E-08 57.0 22.5 233 17-255 13-280 (301)
313 3ii7_A Kelch-like protein 7; p 98.1 0.0013 4.6E-08 55.4 22.7 230 19-255 12-274 (306)
314 2xn4_A Kelch-like protein 2; s 98.1 0.0015 5.1E-08 55.0 22.8 231 18-255 15-278 (302)
315 2g8s_A Glucose/sorbosone dehyd 98.1 0.0033 1.1E-07 54.1 27.5 150 47-198 17-217 (353)
316 2vpj_A Kelch-like protein 12; 98.0 0.0019 6.5E-08 54.3 21.2 239 101-414 14-285 (301)
317 3ei3_A DNA damage-binding prot 98.0 0.018 6.1E-07 57.6 30.4 227 20-253 707-999 (1158)
318 2xn4_A Kelch-like protein 2; s 98.0 0.0032 1.1E-07 52.9 21.9 69 344-414 204-283 (302)
319 3sre_A PON1, serum paraoxonase 98.0 0.0027 9.1E-08 54.2 21.1 196 48-250 50-295 (355)
320 3a9g_A Putative uncharacterize 98.0 0.007 2.4E-07 52.0 31.6 143 90-239 28-214 (354)
321 1zgk_A Kelch-like ECH-associat 97.9 0.0041 1.4E-07 52.4 20.9 234 14-255 20-289 (308)
322 3sbq_A Nitrous-oxide reductase 97.8 0.0046 1.6E-07 55.1 20.3 231 20-254 69-409 (638)
323 3ii7_A Kelch-like protein 7; p 97.8 0.013 4.5E-07 49.2 25.4 189 60-254 13-226 (306)
324 1zgk_A Kelch-like ECH-associat 97.7 0.014 4.6E-07 49.2 21.8 192 58-254 24-241 (308)
325 2uvk_A YJHT; unknown function, 97.7 0.0061 2.1E-07 52.6 20.0 242 15-259 16-348 (357)
326 3pbp_A Nucleoporin NUP82; beta 97.6 0.005 1.7E-07 53.1 17.1 146 13-162 26-208 (452)
327 2g8s_A Glucose/sorbosone dehyd 97.6 0.026 8.9E-07 48.5 29.4 144 91-239 18-214 (353)
328 4asc_A Kelch repeat and BTB do 97.6 0.024 8.1E-07 47.9 24.6 227 22-255 7-279 (315)
329 1xi4_A Clathrin heavy chain; a 97.6 0.0074 2.5E-07 60.2 19.8 270 70-411 48-335 (1630)
330 2uvk_A YJHT; unknown function, 97.6 0.011 3.9E-07 50.9 19.2 70 101-170 19-99 (357)
331 1xi4_A Clathrin heavy chain; a 97.6 0.0058 2E-07 60.9 18.5 236 13-255 71-333 (1630)
332 4asc_A Kelch repeat and BTB do 97.5 0.031 1.1E-06 47.1 22.8 137 114-254 14-175 (315)
333 2woz_A Kelch repeat and BTB do 97.4 0.043 1.5E-06 46.3 23.7 229 21-255 17-289 (318)
334 1cru_A Protein (soluble quinop 97.4 0.073 2.5E-06 47.4 27.9 101 10-110 29-163 (454)
335 3ott_A Two-component system se 97.1 0.22 7.4E-06 47.9 41.2 311 14-413 69-407 (758)
336 3das_A Putative oxidoreductase 97.1 0.11 3.6E-06 44.2 31.3 152 85-239 26-218 (347)
337 2woz_A Kelch repeat and BTB do 97.0 0.12 4.1E-06 43.6 23.0 137 114-254 25-185 (318)
338 3pbp_A Nucleoporin NUP82; beta 97.0 0.14 4.8E-06 44.4 20.9 147 54-208 27-210 (452)
339 2zwa_A Leucine carboxyl methyl 97.0 0.14 4.9E-06 48.4 21.3 152 17-168 396-579 (695)
340 3sbq_A Nitrous-oxide reductase 96.9 0.21 7.1E-06 44.9 27.6 186 63-253 74-354 (638)
341 3ott_A Two-component system se 96.9 0.33 1.1E-05 46.6 41.3 321 13-412 196-550 (758)
342 1tl2_A L10, protein (tachylect 96.8 0.037 1.3E-06 43.1 12.7 132 12-150 45-199 (236)
343 4hvt_A Ritya.17583.B, post-pro 96.8 0.35 1.2E-05 45.7 23.3 201 50-255 131-383 (711)
344 1cru_A Protein (soluble quinop 96.8 0.27 9.4E-06 43.7 34.8 148 89-239 25-244 (454)
345 1tl2_A L10, protein (tachylect 96.8 0.11 3.6E-06 40.6 14.8 165 19-194 4-198 (236)
346 3das_A Putative oxidoreductase 96.7 0.22 7.6E-06 42.3 28.7 148 46-194 30-218 (347)
347 2zwa_A Leucine carboxyl methyl 96.6 0.19 6.5E-06 47.6 19.0 197 57-255 396-637 (695)
348 2be1_A Serine/threonine-protei 96.2 0.15 5.1E-06 43.1 13.6 114 145-261 11-138 (339)
349 2be1_A Serine/threonine-protei 96.1 0.53 1.8E-05 39.8 18.7 145 103-254 11-184 (339)
350 3q6k_A 43.2 kDa salivary prote 94.2 2.4 8.2E-05 36.4 21.9 221 13-239 31-340 (381)
351 2wg3_C Hedgehog-interacting pr 92.9 4.8 0.00016 35.8 28.8 103 91-194 14-155 (463)
352 2wg3_C Hedgehog-interacting pr 91.8 6.6 0.00023 34.9 25.4 103 9-111 15-159 (463)
353 3q6k_A 43.2 kDa salivary prote 90.6 7.6 0.00026 33.3 22.6 86 157-243 123-244 (381)
354 4hvt_A Ritya.17583.B, post-pro 90.0 13 0.00045 35.2 25.2 71 335-406 351-429 (711)
355 4gq2_M Nucleoporin NUP120; bet 87.0 20 0.0007 35.3 15.5 37 335-373 237-273 (950)
356 4gq2_M Nucleoporin NUP120; bet 85.9 29 0.00098 34.3 16.0 35 92-127 237-271 (950)
357 3b7f_A Glycosyl hydrolase, BNR 84.3 19 0.00066 31.0 32.4 212 20-241 23-297 (394)
358 3zwu_A Alkaline phosphatase PH 83.5 9.2 0.00031 35.1 10.4 60 180-240 478-548 (592)
359 3uc1_A DNA gyrase subunit A; D 82.5 21 0.00071 30.0 15.1 68 337-406 149-227 (327)
360 4a9v_A PHOX; hydrolase, beta-p 82.3 12 0.00041 34.1 10.4 62 179-241 477-549 (592)
361 3zwu_A Alkaline phosphatase PH 82.2 5 0.00017 36.9 8.2 59 336-394 478-548 (592)
362 4a9v_A PHOX; hydrolase, beta-p 79.0 8.7 0.0003 34.9 8.4 58 13-70 481-553 (592)
363 3no0_A DNA gyrase subunit A; D 70.7 41 0.0014 27.3 16.5 143 16-165 33-195 (276)
364 4fhn_B Nucleoporin NUP120; pro 66.6 4.6 0.00016 40.8 4.2 36 378-413 239-274 (1139)
365 3f7f_A Nucleoporin NUP120; nuc 63.6 9.9 0.00034 35.7 5.3 34 378-413 223-256 (729)
366 4fhn_B Nucleoporin NUP120; pro 54.5 9.5 0.00033 38.6 4.0 38 224-261 239-276 (1139)
367 3f7f_A Nucleoporin NUP120; nuc 52.1 21 0.00071 33.6 5.4 37 224-262 223-259 (729)
368 3l6v_A GYRA, DNA gyrase subuni 51.3 1.2E+02 0.0039 26.0 17.0 196 142-406 5-264 (370)
369 3no0_A DNA gyrase subunit A; D 44.2 1.3E+02 0.0043 24.4 20.0 112 48-165 24-145 (276)
370 1suu_A DNA gyrase subunit A; t 34.7 1.9E+02 0.0066 23.8 21.2 187 142-406 6-230 (312)
371 1sqj_A OXG-RCBH, oligoxylogluc 32.2 3.5E+02 0.012 26.0 23.0 139 9-152 16-189 (789)
372 3kci_A Probable E3 ubiquitin-p 28.1 2.8E+02 0.0096 23.6 20.7 30 224-253 212-241 (389)
373 3kci_A Probable E3 ubiquitin-p 27.0 2.9E+02 0.01 23.5 24.9 150 93-253 107-293 (389)
374 3mez_B Mannose-specific lectin 26.7 1.5E+02 0.005 19.9 6.8 25 380-406 59-83 (113)
375 3ge2_A Lipoprotein, putative; 24.8 1.3E+02 0.0044 20.6 4.3 35 375-412 81-115 (130)
376 3b7f_A Glycosyl hydrolase, BNR 24.0 3.3E+02 0.011 23.0 26.7 108 49-163 116-259 (394)
377 3qhy_B Beta-lactamase inhibito 22.5 3E+02 0.01 22.1 17.8 246 71-414 3-253 (282)
378 3al9_A Plexin-A2; beta-propell 22.0 2.4E+02 0.0083 25.6 7.1 52 197-248 419-476 (539)
379 1q47_A Semaphorin 3A; beta pro 20.1 2.2E+02 0.0074 25.5 6.3 63 186-248 416-487 (495)
No 1
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1e-51 Score=387.66 Aligned_cols=382 Identities=14% Similarity=0.159 Sum_probs=286.5
Q ss_pred ccccCeEEcCCCCEEEEEeCCeEEEEecCCCcEEEEe-ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcc--ee
Q 014755 8 KQTGPSCFSPNARYIAVAVDYRLVVRDAHSFKVVQLF-SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEW--TC 84 (419)
Q Consensus 8 ~~~~~~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~--~~ 84 (419)
+....++|||||++||+++++.|++|++.+++....+ +|...|++++|+|+|++||+++.| |+|+|||+.+++. ..
T Consensus 19 g~~~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d-~~v~lWd~~~~~~~~~~ 97 (611)
T 1nr0_A 19 GTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVH-GNVRIWDTTQTTHILKT 97 (611)
T ss_dssp TCCCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETT-SEEEEEESSSTTCCEEE
T ss_pred CceeEEeeCCCCCEEEeCCCCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCC-CCEEEeECCCCcceeeE
Confidence 4444589999999999999889999999887776655 699999999999999999999977 8999999864422 22
Q ss_pred eee--------------------------------------------cCCccEeEEEECCCCC-EEEEEecCCCeEEEEE
Q 014755 85 KID--------------------------------------------EGLAGIAYARWSPDSR-HILTTSDFQLRLTVWS 119 (419)
Q Consensus 85 ~~~--------------------------------------------~~~~~v~~~~~~~~~~-~l~~~~~~~~~i~iwd 119 (419)
.+. +|...|.+++|+|+++ .|++++.|+ .|++||
T Consensus 98 ~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~-~v~lwd 176 (611)
T 1nr0_A 98 TIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDN-TVAIFE 176 (611)
T ss_dssp EEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTS-CEEEEE
T ss_pred eecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCC-eEEEEE
Confidence 222 3445566666777665 477777776 999999
Q ss_pred cCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEe-------ccccceeeeeECCCCCe
Q 014755 120 LLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFA-------VDTLDLADIEWSPDDSA 191 (419)
Q Consensus 120 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~ 191 (419)
.++++... +..|...|.+++|+|++++|++++.| +.|++||+.+++.+..+. .|...|.+++|+|++++
T Consensus 177 ~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D---~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~ 253 (611)
T 1nr0_A 177 GPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGD---GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTK 253 (611)
T ss_dssp TTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETT---SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSE
T ss_pred CCCCeEeeeeccccCceEEEEECCCCCEEEEEECC---CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCE
Confidence 99888776 88899999999999999999999987 899999999999888874 68899999999999999
Q ss_pred EEEEcCCCCceEEEEcC-CCceEEEEee-----------------------------------------cCCCCceeEEE
Q 014755 192 IVIWDSPLEYKVLIYSP-DGRCLLKYQA-----------------------------------------YESGLGVKSIS 229 (419)
Q Consensus 192 l~~~~~~~~~~i~~~d~-~~~~~~~~~~-----------------------------------------~~~~~~v~~~~ 229 (419)
|++ ++.|+.|++||+ +++.+..+.. ..|...|.+++
T Consensus 254 l~s--~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~ 331 (611)
T 1nr0_A 254 IAS--ASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALS 331 (611)
T ss_dssp EEE--EETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred EEE--EeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEE
Confidence 998 667999999999 6665544321 12344899999
Q ss_pred EccCCCeEEEEEecCcEEEEEcCCceeeeeec--ccccccC----CCc--------------------------------
Q 014755 230 WSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFM--HLSTVRG----PCF-------------------------------- 271 (419)
Q Consensus 230 ~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~~~~----~~~-------------------------------- 271 (419)
|+|+|++|++++.|++|++||+.+++....+. |...+.. +..
T Consensus 332 ~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~ 411 (611)
T 1nr0_A 332 SSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLS 411 (611)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECS
T ss_pred EeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecC
Confidence 99999999999999999999999887765542 3222211 000
Q ss_pred ----cceeccCCCccc-------------------------ccceeeeccCccccccccccCCceEEEEEeccCCCCCCC
Q 014755 272 ----PAVFKEVDEPLQ-------------------------LDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPF 322 (419)
Q Consensus 272 ----~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (419)
.+.|+ |++ ..+..+++..++...+... ......+|++......
T Consensus 412 ~~~~~~~~s----~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs-~D~~v~lwd~~~~~~~--- 483 (611)
T 1nr0_A 412 SQPLGLAVS----ADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGG-QDSKVHVYKLSGASVS--- 483 (611)
T ss_dssp SCEEEEEEC----TTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEE-TTSEEEEEEEETTEEE---
T ss_pred CCCcEEEEe----CCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeC-CCCeEEEEEccCCcee---
Confidence 01111 111 0011222222222111111 1234455555432110
Q ss_pred CCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccC-CCceee--cc-cCCCeeEEEeCCCCCeEEEEeCCC
Q 014755 323 QKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICR-QEPAAI--LV-QKDPIRAATWDPTCTRLVLCTGSS 398 (419)
Q Consensus 323 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~-~~~~~~--~~-~~~~v~~~~~s~~~~~l~s~~~dg 398 (419)
.... .+|...|++++|||||++|++++.| ++|++|++.+ +++... .+ |...|++++|+|||++||+++.|+
T Consensus 484 --~~~~-~~h~~~v~~v~fspdg~~las~s~d--~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~ 558 (611)
T 1nr0_A 484 --EVKT-IVHPAEITSVAFSNNGAFLVATDQS--RKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDN 558 (611)
T ss_dssp --EEEE-EECSSCEEEEEECTTSSEEEEEETT--SCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred --eeec-cCCCCceEEEEECCCCCEEEEEcCC--CCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCC
Confidence 0011 3588899999999999999999999 9999999987 555443 34 999999999999999999999999
Q ss_pred cEEEeecCCCe
Q 014755 399 HLYMWTPSGAY 409 (419)
Q Consensus 399 ~i~vw~~~~~~ 409 (419)
+|++|+++++.
T Consensus 559 ~v~lW~~~~~~ 569 (611)
T 1nr0_A 559 SVIVWNMNKPS 569 (611)
T ss_dssp CEEEEETTCTT
T ss_pred cEEEEECCCcc
Confidence 99999998654
No 2
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4.6e-50 Score=376.42 Aligned_cols=323 Identities=15% Similarity=0.211 Sum_probs=265.1
Q ss_pred cccccC---eEEcCCCC-EEEEEe-CCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC
Q 014755 7 YKQTGP---SCFSPNAR-YIAVAV-DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP 80 (419)
Q Consensus 7 ~~~~~~---~~~s~d~~-~la~~~-~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~ 80 (419)
.+|... ++|+|+++ +|++++ |++|++||..+++....+. |.+.|.+++|+|+|++|++++.| ++|++||+.++
T Consensus 144 ~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D-~~i~lwd~~~g 222 (611)
T 1nr0_A 144 TGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGD-GTIVLYNGVDG 222 (611)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETT-SCEEEEETTTC
T ss_pred cCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECC-CcEEEEECCCC
Confidence 455554 89999987 589888 8899999999988877664 99999999999999999999977 89999999999
Q ss_pred cceeeee-------cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE--------------------------
Q 014755 81 EWTCKID-------EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-------------------------- 127 (419)
Q Consensus 81 ~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-------------------------- 127 (419)
+....+. +|...|.+++|+|++++|++++.|+ +|++||+++++...
T Consensus 223 ~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~-~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s 301 (611)
T 1nr0_A 223 TKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADK-TIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSIS 301 (611)
T ss_dssp CEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTS-EEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEE
T ss_pred cEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCC-eEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEe
Confidence 8877763 6899999999999999999999988 99999998876543
Q ss_pred ------------------eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEE-e--------------
Q 014755 128 ------------------VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVF-A-------------- 174 (419)
Q Consensus 128 ------------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~-~-------------- 174 (419)
+.+|...+.+++|+|++++|++++.| +.|++||+.+++....+ .
T Consensus 302 ~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D---~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~ 378 (611)
T 1nr0_A 302 ANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAE---GHINSWDISTGISNRVFPDVHATMITGIKTTSK 378 (611)
T ss_dssp TTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT---SCEEEEETTTCCEEECSSCSCSSCEEEEEECTT
T ss_pred CCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCC---CcEEEEECCCCceeeecccCCcceEEEEEECCC
Confidence 23577789999999999999999987 89999998876543221 0
Q ss_pred -------------------------------------------------------------------ccccceeeeeECC
Q 014755 175 -------------------------------------------------------------------VDTLDLADIEWSP 187 (419)
Q Consensus 175 -------------------------------------------------------------------~~~~~v~~~~~~~ 187 (419)
.+...+.+++|+|
T Consensus 379 ~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~sp 458 (611)
T 1nr0_A 379 GDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSN 458 (611)
T ss_dssp SCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECT
T ss_pred CcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeC
Confidence 0123467899999
Q ss_pred CCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCC-ceeeeeecccccc
Q 014755 188 DDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLT-WKTFAEFMHLSTV 266 (419)
Q Consensus 188 ~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~-~~~~~~~~~~~~~ 266 (419)
+|+++++ ++.|+.|++||+.+..+.......+...|++++|+|+|++|++++.|++|++||+.+ ++.+....
T Consensus 459 dg~~las--gs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~----- 531 (611)
T 1nr0_A 459 DKQFVAV--GGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNS----- 531 (611)
T ss_dssp TSCEEEE--EETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCC-----
T ss_pred CCCEEEE--eCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeee-----
Confidence 9999998 677999999999443322111122334899999999999999999999999999876 43322100
Q ss_pred cCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCe
Q 014755 267 RGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQ 346 (419)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 346 (419)
...|...|.+++|||||+
T Consensus 532 --------------------------------------------------------------~~~H~~~V~~v~fspdg~ 549 (611)
T 1nr0_A 532 --------------------------------------------------------------WTFHTAKVACVSWSPDNV 549 (611)
T ss_dssp --------------------------------------------------------------CCCCSSCEEEEEECTTSS
T ss_pred --------------------------------------------------------------eeecccceeEEEECCCCC
Confidence 113888899999999999
Q ss_pred EEEEecCCCCceEEEeeccCCC-ce-eec-cc-CCCeeEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 347 YICTRNDSMPTTLWIWDICRQE-PA-AIL-VQ-KDPIRAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 347 ~l~~~~~d~~~~i~iwd~~~~~-~~-~~~-~~-~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
+||+++.| ++|+|||+.+++ .. ..+ +| ...|++++|+|+++ |++++.|++|++|++.
T Consensus 550 ~lasgs~D--~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~-l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 550 RLATGSLD--NSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT-IVSAGQDSNIKFWNVP 610 (611)
T ss_dssp EEEEEETT--SCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTE-EEEEETTSCEEEEECC
T ss_pred EEEEEECC--CcEEEEECCCcccccchhhccCcccCeeEEEEcCCCE-EEEecCCCCEEEEecc
Confidence 99999999 999999998865 33 344 58 89999999999998 9999999999999973
No 3
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.9e-49 Score=369.29 Aligned_cols=348 Identities=16% Similarity=0.258 Sum_probs=288.7
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCc
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLA 91 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~ 91 (419)
++|+||+++|++++ ++.|++||...........|...|.+++|+|+++.|++++.+ +.|++|+. +++....+.+|..
T Consensus 227 ~~~s~dg~~l~~~~~d~~i~~w~~~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d-~~i~~w~~-~~~~~~~~~~h~~ 304 (577)
T 2ymu_A 227 VAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVNGVAFRPDGQTIASASDD-KTVKLWNR-NGQLLQTLTGHSS 304 (577)
T ss_dssp EEECTTSSCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECTTSSEEEEEETT-SCEEEEET-TSCEEEEECCCSS
T ss_pred EEECCCCCEEEEEeCCCEEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCC-CEEEEEeC-CCcEEEEEecCCC
Confidence 88999999999998 788999997654444455699999999999999999999976 89999996 4566778889999
Q ss_pred cEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEE
Q 014755 92 GIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMG 171 (419)
Q Consensus 92 ~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~ 171 (419)
.|.+++|+|+++.+++++.++ .|++||+.......+..+...+.+++|+|+++++++++.+ +.|++||. +++.+.
T Consensus 305 ~v~~~~~~~~~~~l~t~~~d~-~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d---g~v~~~~~-~~~~~~ 379 (577)
T 2ymu_A 305 SVWGVAFSPDGQTIASASDDK-TVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDD---KTVKLWNR-NGQLLQ 379 (577)
T ss_dssp CEEEEEECTTSSEEEEEETTS-CEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEET-TCCEEE
T ss_pred CeEEEEECCCCCEEEEEeCCC-eEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCC---CEEEEEcC-CCCEEE
Confidence 999999999999999999987 9999999888777788899999999999999999999886 89999995 577888
Q ss_pred EEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEc
Q 014755 172 VFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNH 251 (419)
Q Consensus 172 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~ 251 (419)
.+..|...|.+++|+|+++++++ ++.++.|++||.+++.+..+..|.. .|.+++|+|++++|++++.|+.|++||.
T Consensus 380 ~~~~~~~~v~~~~~s~dg~~l~~--~~~d~~v~~~~~~~~~~~~~~~~~~--~v~~~~~s~d~~~l~~~~~d~~v~~w~~ 455 (577)
T 2ymu_A 380 TLTGHSSSVRGVAFSPDGQTIAS--ASDDKTVKLWNRNGQLLQTLTGHSS--SVWGVAFSPDDQTIASASDDKTVKLWNR 455 (577)
T ss_dssp EEECCSSCEEEEEECTTSSCEEE--EETTSEEEEECTTCCEEEEEECCSS--CEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred EecCCCCCeEEEEECCCCCEEEE--EeCCCEEEEEeCCCCEEEEecCCCC--CeEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 89999999999999999999998 5678999999999998888888766 8999999999999999999999999996
Q ss_pred CCceeeeeec-ccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCC
Q 014755 252 LTWKTFAEFM-HLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKP 330 (419)
Q Consensus 252 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (419)
+++.+..+. |...+ ..+.|++ ++ ..++..+ ......+|+.. .+....+.
T Consensus 456 -~~~~~~~~~~~~~~v----~~~~~sp----d~---~~las~~----------~d~~i~iw~~~--------~~~~~~~~ 505 (577)
T 2ymu_A 456 -NGQLLQTLTGHSSSV----RGVAFSP----DG---QTIASAS----------DDKTVKLWNRN--------GQLLQTLT 505 (577)
T ss_dssp -TSCEEEEEECCSSCE----EEEEECT----TS---CEEEEEE----------TTSEEEEEETT--------SCEEEEEE
T ss_pred -CCCEEEEEcCCCCCE----EEEEEcC----CC---CEEEEEe----------CCCEEEEEcCC--------CCEEEEEe
Confidence 456666555 55444 2355553 22 1222111 11223334321 12223345
Q ss_pred CCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCcee-ecccCCCeeEEEeCCCCCeEEEEeCCCcEEEee
Q 014755 331 NPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAA-ILVQKDPIRAATWDPTCTRLVLCTGSSHLYMWT 404 (419)
Q Consensus 331 ~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~ 404 (419)
+|...|++++|+|||++||+++.| +.|+|||.. ++++. +.+|.+.|++++|+|||++|++++.|++|++||
T Consensus 506 ~h~~~v~~l~~s~dg~~l~s~~~d--g~v~lwd~~-~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 506 GHSSSVRGVAFSPDGQTIASASDD--KTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETT--SEEEEECTT-SCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCCCEEEEEEcCCCCEEEEEECc--CEEEEEeCC-CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 789999999999999999999999 999999964 55554 447999999999999999999999999999997
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=8.2e-50 Score=356.63 Aligned_cols=285 Identities=14% Similarity=0.253 Sum_probs=262.0
Q ss_pred EEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcC
Q 014755 42 QLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLL 121 (419)
Q Consensus 42 ~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~ 121 (419)
.+.+|.++|++++|+|++++|++++.| |+|++||+.+++....+.+|...|.+++|+|++++|++++.|+ .|++||+.
T Consensus 103 ~l~gh~~~V~~~~~~p~~~~l~s~s~D-g~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~-~i~iwd~~ 180 (410)
T 1vyh_C 103 ALSGHRSPVTRVIFHPVFSVMVSASED-ATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADM-TIKLWDFQ 180 (410)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEESS-SCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTS-CCCEEETT
T ss_pred eecccCCcEEEEEEcCCCCEEEEEeCC-CeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCC-eEEEEeCC
Confidence 345699999999999999999999977 8999999999999999999999999999999999999999988 99999999
Q ss_pred CCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCC
Q 014755 122 NTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLE 200 (419)
Q Consensus 122 ~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~ 200 (419)
+++++. +..|...+.+++|+|++++|++++.| +.|++||+++++.+..+..|...+.++.++|++.++++ ++.|
T Consensus 181 ~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D---~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s--~s~D 255 (410)
T 1vyh_C 181 GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRD---KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS--CSND 255 (410)
T ss_dssp SSCEEECCCCCSSCEEEEEECSSSSEEEEEETT---SEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEE--EETT
T ss_pred CCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCC---CeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEE--EcCC
Confidence 988887 88899999999999999999999987 89999999999999999999999999999999999998 6779
Q ss_pred ceEEEEcC-CCceEEEEeecCCCCceeEEEEccC--------------------CCeEEEEEecCcEEEEEcCCceeeee
Q 014755 201 YKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPC--------------------GQFLAVGSYDQTLRVLNHLTWKTFAE 259 (419)
Q Consensus 201 ~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~--------------------~~~l~~~~~d~~i~v~d~~~~~~~~~ 259 (419)
+.|++||+ +++....+..|.. .|.+++|+|+ +.+|++|+.|++|++||+.+++++..
T Consensus 256 ~~v~vwd~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~ 333 (410)
T 1vyh_C 256 QTVRVWVVATKECKAELREHRH--VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT 333 (410)
T ss_dssp SCEEEEETTTCCEEEEECCCSS--CEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEE
T ss_pred CeEEEEECCCCceeeEecCCCc--eEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEE
Confidence 99999999 7888888877766 8999999996 66899999999999999999887766
Q ss_pred ecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEE
Q 014755 260 FMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLM 339 (419)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 339 (419)
+. +|...|.++
T Consensus 334 ~~---------------------------------------------------------------------~h~~~v~~v 344 (410)
T 1vyh_C 334 LV---------------------------------------------------------------------GHDNWVRGV 344 (410)
T ss_dssp EE---------------------------------------------------------------------CCSSCEEEE
T ss_pred EE---------------------------------------------------------------------CCCCcEEEE
Confidence 53 477789999
Q ss_pred EEccCCeEEEEecCCCCceEEEeeccCCCceeec-ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 340 SWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL-VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 340 ~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
+|+|+|++|++++.| +.|++||+.++++...+ +|...|++++|+|++++|++++.||+|++|++.
T Consensus 345 ~~~~~g~~l~s~s~D--~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 345 LFHSGGKFILSCADD--KTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp EECSSSSCEEEEETT--TEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred EEcCCCCEEEEEeCC--CeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 999999999999999 99999999998877666 599999999999999999999999999999863
No 5
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=5.1e-50 Score=351.08 Aligned_cols=319 Identities=12% Similarity=0.141 Sum_probs=237.6
Q ss_pred ccccCeEEcCCCCEEEEEeCCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEecc-----CCeEEEEEccCCcc
Q 014755 8 KQTGPSCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYK-----RLMIQAWSLTQPEW 82 (419)
Q Consensus 8 ~~~~~~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~-----~g~i~iw~~~~~~~ 82 (419)
.|...+.+.+++.++...++.....|++....+ ..|...|.+++|||||++|++++.+ ++.|++|+..++..
T Consensus 6 ~~~sg~d~g~~~~~~~~~g~~~~~~w~~p~~~p---~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~ 82 (357)
T 4g56_B 6 HHSSGVDLGTENLYFQSNGSSKGSAWGRPVTAP---ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAP 82 (357)
T ss_dssp -------------------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---
T ss_pred ccccCCCCCccceEEecCCCccccccCCCCCCc---ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCc
Confidence 345558888888887777778889998865433 3599999999999999999999863 37899999877643
Q ss_pred ----eeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-----eccCCCCeeeEEEccCCCEEEEEeec
Q 014755 83 ----TCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-----VQSPKHASKGVAFTQDGKFAAICTRR 153 (419)
Q Consensus 83 ----~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~ 153 (419)
......|...|.+++|+|+++ +++++.++ .|++||+.+++... ...|...|.+++|+|++++|++++.|
T Consensus 83 ~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg-~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d 160 (357)
T 4g56_B 83 NESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSG-AVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD 160 (357)
T ss_dssp CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTS-CEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETT
T ss_pred ceeEecccCCCCCCEEEEEEcCCCC-EEEEECCC-EEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC
Confidence 233456888999999999986 45566776 99999999876543 34678899999999999999999987
Q ss_pred CCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCC-eEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEc
Q 014755 154 DCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDS-AIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWS 231 (419)
Q Consensus 154 ~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s 231 (419)
+.|++||+++++.+..+..|...|.+++|+|++. .+++ ++.|+.|++||+ +++....+....+...+.+++|+
T Consensus 161 ---g~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s--~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~s 235 (357)
T 4g56_B 161 ---FSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLS--CGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWH 235 (357)
T ss_dssp ---SCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEE--EETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEEC
T ss_pred ---CeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeee--eccCCceEEEECCCCceeeeeeeccccccccchhhh
Confidence 8999999999999999999999999999999986 4555 566899999999 77776666655555579999999
Q ss_pred cCC-CeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEE
Q 014755 232 PCG-QFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVR 310 (419)
Q Consensus 232 ~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (419)
|++ .+|++|+.|+.|++||+++++++..+.
T Consensus 236 p~~~~~la~g~~d~~i~~wd~~~~~~~~~~~------------------------------------------------- 266 (357)
T 4g56_B 236 PEKDDTFACGDETGNVSLVNIKNPDSAQTSA------------------------------------------------- 266 (357)
T ss_dssp TTSTTEEEEEESSSCEEEEESSCGGGCEEEC-------------------------------------------------
T ss_pred hcccceEEEeecccceeEEECCCCcEeEEEe-------------------------------------------------
Confidence 975 678899999999999999887766653
Q ss_pred EEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCC-eEEEEecCCCCceEEEeeccCCCceeecccCCCeeEEEeCC-CC
Q 014755 311 YEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDS-QYICTRNDSMPTTLWIWDICRQEPAAILVQKDPIRAATWDP-TC 388 (419)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~-~~ 388 (419)
+|...|++++|+|++ ++||+++.| ++|+|||+++++++..++|.+.|++++|+| ++
T Consensus 267 --------------------~~~~~v~~l~~sp~~~~~lasgs~D--~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~ 324 (357)
T 4g56_B 267 --------------------VHSQNITGLAYSYHSSPFLASISED--CTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDH 324 (357)
T ss_dssp --------------------CCSSCEEEEEECSSSSCCEEEEETT--SCEEEECTTSCEEEEECCCSSCEEEEEECSSST
T ss_pred --------------------ccceeEEEEEEcCCCCCEEEEEeCC--CEEEEEECCCCcEeEECCCCCCEEEEEEeCCCC
Confidence 467779999999987 689999999 999999999999999889999999999998 78
Q ss_pred CeEEEEeCCCcEEEeecCC
Q 014755 389 TRLVLCTGSSHLYMWTPSG 407 (419)
Q Consensus 389 ~~l~s~~~dg~i~vw~~~~ 407 (419)
++|++++.||+|++|++..
T Consensus 325 ~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 325 SKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp TEEEEEETTSCEEEEECC-
T ss_pred CEEEEEcCCCeEEEEECCC
Confidence 9999999999999999974
No 6
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1e-48 Score=337.63 Aligned_cols=282 Identities=13% Similarity=0.244 Sum_probs=253.8
Q ss_pred ecCcceeEEEEecC----CCeEEEEeccCCeEEEEEccCCcc--eeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEE
Q 014755 45 SCLDKISYIEWALD----SEYILCGLYKRLMIQAWSLTQPEW--TCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVW 118 (419)
Q Consensus 45 ~~~~~v~~~~~s~~----~~~l~~~~~~~g~i~iw~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iw 118 (419)
+|.+.|.+++|+|+ +++|++|+.| ++|+||++.+++. ...+.+|...|.+++|++++..+++++.|+ .|++|
T Consensus 30 ~H~~~V~~v~~~~~~~~~~~~l~tgs~D-~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~-~i~lW 107 (321)
T 3ow8_A 30 AHDDAIWSVAWGTNKKENSETVVTGSLD-DLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDA-HIRLW 107 (321)
T ss_dssp SSSSCEEEEEEC-------CEEEEEETT-SCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTS-EEEEE
T ss_pred cCCCcEEEEEEecCCCCCCCEEEEEcCC-CCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCC-cEEEE
Confidence 59999999999985 6789999977 8999999987754 345788999999999999999999999988 99999
Q ss_pred EcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcC
Q 014755 119 SLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDS 197 (419)
Q Consensus 119 d~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 197 (419)
|+++++.+. +..+...+.+++|+|++++|++++.+ +.|++|++++++....+..+...+.+++|+|+++++++ +
T Consensus 108 d~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~d---g~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~las--g 182 (321)
T 3ow8_A 108 DLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHV---GKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLAS--G 182 (321)
T ss_dssp ETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTT---SEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEE--E
T ss_pred ECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCC---CcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEE--E
Confidence 999998877 77788889999999999999999886 89999999999999999999999999999999999998 6
Q ss_pred CCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceec
Q 014755 198 PLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFK 276 (419)
Q Consensus 198 ~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (419)
+.|+.|++||+ +++.+..+..|.. .|.+++|+|++++|++++.|++|++||+++++.+..+.
T Consensus 183 ~~dg~i~iwd~~~~~~~~~~~~h~~--~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~--------------- 245 (321)
T 3ow8_A 183 AIDGIINIFDIATGKLLHTLEGHAM--PIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLS--------------- 245 (321)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSS--CCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEEC---------------
T ss_pred cCCCeEEEEECCCCcEEEEEcccCC--ceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEc---------------
Confidence 77999999999 8888888887666 89999999999999999999999999998877665543
Q ss_pred cCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCC
Q 014755 277 EVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMP 356 (419)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~ 356 (419)
+|...|.+++|+|++++|++++.|
T Consensus 246 ------------------------------------------------------~h~~~v~~~~~sp~~~~l~s~s~D-- 269 (321)
T 3ow8_A 246 ------------------------------------------------------GHASWVLNVAFCPDDTHFVSSSSD-- 269 (321)
T ss_dssp ------------------------------------------------------CCSSCEEEEEECTTSSEEEEEETT--
T ss_pred ------------------------------------------------------CCCCceEEEEECCCCCEEEEEeCC--
Confidence 477789999999999999999999
Q ss_pred ceEEEeeccCCCceeec-ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 357 TTLWIWDICRQEPAAIL-VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 357 ~~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
++|++||+.+++++..+ +|...|++++|+|++++|++++.||+|++||..
T Consensus 270 ~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 270 KSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred CcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 99999999999887666 699999999999999999999999999999963
No 7
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6.7e-48 Score=335.97 Aligned_cols=283 Identities=17% Similarity=0.243 Sum_probs=254.2
Q ss_pred EeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC
Q 014755 43 LFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN 122 (419)
Q Consensus 43 ~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~ 122 (419)
+.+|.+.|.+++|+|++++|++++.| |+|++||+.+++.+..+..|...|.+++|+|++++|++++.++ .+++|++.+
T Consensus 51 l~gH~~~v~~~~~s~d~~~l~s~s~D-g~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~-~v~iw~~~~ 128 (340)
T 1got_B 51 LRGHLAKIYAMHWGTDSRLLLSASQD-GKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDN-ICSIYNLKT 128 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETT-TEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTC-EEEEEETTT
T ss_pred ecCCCCceEEEEECCCCCEEEEEeCC-CcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCC-eEEEEECcc
Confidence 44699999999999999999999977 8999999999999989999999999999999999999999988 999999987
Q ss_pred Ce----EEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcC
Q 014755 123 TA----CVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDS 197 (419)
Q Consensus 123 ~~----~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 197 (419)
++ ... +..|...+.++.|++++. +++++.| +.|++||+++++.+..+..|...|.+++|+|+++++++ +
T Consensus 129 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d---~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s--g 202 (340)
T 1got_B 129 REGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGD---TTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVS--G 202 (340)
T ss_dssp CSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETT---SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE--E
T ss_pred CCCcceeEEEecCCCccEEEEEECCCCc-EEEEECC---CcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEE--E
Confidence 52 333 778899999999998875 7777776 89999999999999999999999999999999999988 6
Q ss_pred CCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceec
Q 014755 198 PLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFK 276 (419)
Q Consensus 198 ~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (419)
+.|+.|++||+ ++.....+..|.. .|.+++|+|++++|++++.|++|++||+++++.+..+.+.
T Consensus 203 ~~d~~v~~wd~~~~~~~~~~~~h~~--~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~------------- 267 (340)
T 1got_B 203 ACDASAKLWDVREGMCRQTFTGHES--DINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHD------------- 267 (340)
T ss_dssp ETTSCEEEEETTTCSEEEEECCCSS--CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCT-------------
T ss_pred eCCCcEEEEECCCCeeEEEEcCCcC--CEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccC-------------
Confidence 77999999999 8888888887766 8999999999999999999999999999988776665421
Q ss_pred cCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCC
Q 014755 277 EVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMP 356 (419)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~ 356 (419)
.+...|.+++|+|+|++|++|+.|
T Consensus 268 ------------------------------------------------------~~~~~v~~~~~s~~g~~l~~g~~d-- 291 (340)
T 1got_B 268 ------------------------------------------------------NIICGITSVSFSKSGRLLLAGYDD-- 291 (340)
T ss_dssp ------------------------------------------------------TCCSCEEEEEECTTSSEEEEEETT--
T ss_pred ------------------------------------------------------CcccceEEEEECCCCCEEEEECCC--
Confidence 133458999999999999999999
Q ss_pred ceEEEeeccCCCceeec-ccCCCeeEEEeCCCCCeEEEEeCCCcEEEee
Q 014755 357 TTLWIWDICRQEPAAIL-VQKDPIRAATWDPTCTRLVLCTGSSHLYMWT 404 (419)
Q Consensus 357 ~~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~ 404 (419)
+.|++||+.+++....+ +|...|++++|+|++++|++++.||+|++||
T Consensus 292 ~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 292 FNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 99999999998877666 6999999999999999999999999999997
No 8
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3e-47 Score=356.47 Aligned_cols=353 Identities=16% Similarity=0.274 Sum_probs=287.6
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCc
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLA 91 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~ 91 (419)
++++|++++|++++ ++.|++||...........|...|.+++|+|++++|++++.+ +.|++||. +++.+..+..|..
T Consensus 186 ~~~~~~~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d-~~i~~w~~-~~~~~~~~~~~~~ 263 (577)
T 2ymu_A 186 VAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDD-KTVKLWNR-NGQLLQTLTGHSS 263 (577)
T ss_dssp EEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETT-SCEEEECT-TSCEEEEECCCSS
T ss_pred eeecCCCCEEEEEcCCCEEEEEeCCCcEEEEEecCCCCEEEEEECCCCCEEEEEeCC-CEEEEEeC-CCCEEEEEecCCC
Confidence 78999999999998 889999997544444455699999999999999999999976 89999996 4667778889999
Q ss_pred cEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEE
Q 014755 92 GIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMG 171 (419)
Q Consensus 92 ~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~ 171 (419)
.|.+++|+|+++.+++++.++ .|++||........+..|...+.+++|+|+++.+++++.+ +.|++||+.. +.+.
T Consensus 264 ~v~~v~~~~d~~~l~~~~~d~-~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d---~~i~~w~~~~-~~~~ 338 (577)
T 2ymu_A 264 SVNGVAFRPDGQTIASASDDK-TVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDD---KTVKLWNRNG-QHLQ 338 (577)
T ss_dssp CEEEEEECTTSSEEEEEETTS-CEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETT---SCEEEEETTS-CEEE
T ss_pred CEEEEEEcCCCCEEEEEeCCC-EEEEEeCCCcEEEEEecCCCCeEEEEECCCCCEEEEEeCC---CeEEEEeCCC-CeeE
Confidence 999999999999999999987 9999998765555588899999999999999999999987 8999999864 4566
Q ss_pred EEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEc
Q 014755 172 VFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNH 251 (419)
Q Consensus 172 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~ 251 (419)
.+..|...+.+++|+|+++.+++ +..++.+++||.+++.+..+..|.. .|.+++|+|++++|++++.|+.|++||.
T Consensus 339 ~~~~~~~~v~~~~~s~~g~~l~~--~~~dg~v~~~~~~~~~~~~~~~~~~--~v~~~~~s~dg~~l~~~~~d~~v~~~~~ 414 (577)
T 2ymu_A 339 TLTGHSSSVWGVAFSPDGQTIAS--ASDDKTVKLWNRNGQLLQTLTGHSS--SVRGVAFSPDGQTIASASDDKTVKLWNR 414 (577)
T ss_dssp EECCCSSCEEEEEECTTSSEEEE--EETTSEEEEEETTCCEEEEEECCSS--CEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred EEeCCCCCEEEEEECCCCCEEEE--EeCCCEEEEEcCCCCEEEEecCCCC--CeEEEEECCCCCEEEEEeCCCEEEEEeC
Confidence 77888999999999999999998 6678999999999999888887766 8999999999999999999999999995
Q ss_pred CCceeeeeec-ccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCC
Q 014755 252 LTWKTFAEFM-HLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKP 330 (419)
Q Consensus 252 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (419)
+++.+..+. |...+. .+.|++ ++. .++.. . ......+|+... +....+.
T Consensus 415 -~~~~~~~~~~~~~~v~----~~~~s~----d~~---~l~~~---------~-~d~~v~~w~~~~--------~~~~~~~ 464 (577)
T 2ymu_A 415 -NGQLLQTLTGHSSSVW----GVAFSP----DDQ---TIASA---------S-DDKTVKLWNRNG--------QLLQTLT 464 (577)
T ss_dssp -TCCEEEEEECCSSCEE----EEEECT----TSS---EEEEE---------E-TTSEEEEEETTS--------CEEEEEE
T ss_pred -CCCEEEEecCCCCCeE----EEEECC----CCC---EEEEE---------c-CCCEEEEEECCC--------CEEEEEc
Confidence 566666665 554442 244543 221 11111 1 112233343211 1122344
Q ss_pred CCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceee-cccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCe
Q 014755 331 NPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAI-LVQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAY 409 (419)
Q Consensus 331 ~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~ 409 (419)
+|...|.+++|+|++++||+++.| +.|++||.. +++... .+|...|++++|+||+++||+++.||.|++||..+..
T Consensus 465 ~~~~~v~~~~~spd~~~las~~~d--~~i~iw~~~-~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~ 541 (577)
T 2ymu_A 465 GHSSSVRGVAFSPDGQTIASASDD--KTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQL 541 (577)
T ss_dssp CCSSCEEEEEECTTSCEEEEEETT--SEEEEEETT-SCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCE
T ss_pred CCCCCEEEEEEcCCCCEEEEEeCC--CEEEEEcCC-CCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCCE
Confidence 688999999999999999999999 999999964 555544 4699999999999999999999999999999976443
No 9
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=6.8e-47 Score=326.25 Aligned_cols=281 Identities=15% Similarity=0.201 Sum_probs=250.8
Q ss_pred hhcccccC---eEEcCC----CCEEEEEe-CCeEEEEecCCCcEEE---EeecCcceeEEEEecCCCeEEEEeccCCeEE
Q 014755 5 EAYKQTGP---SCFSPN----ARYIAVAV-DYRLVVRDAHSFKVVQ---LFSCLDKISYIEWALDSEYILCGLYKRLMIQ 73 (419)
Q Consensus 5 ~~~~~~~~---~~~s~d----~~~la~~~-~~~i~i~~~~~~~~~~---~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~ 73 (419)
...+|... ++|+|+ +++|++|+ |++|+||++.+++... ..+|...|.+++|+|++.++++++.| ++|+
T Consensus 27 ~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D-~~i~ 105 (321)
T 3ow8_A 27 QEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLD-AHIR 105 (321)
T ss_dssp ETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETT-SEEE
T ss_pred ecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCC-CcEE
Confidence 44577766 789885 67999998 8999999998776433 34599999999999999999999977 8999
Q ss_pred EEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEee
Q 014755 74 AWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTR 152 (419)
Q Consensus 74 iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~ 152 (419)
+||+.+++.+..+..+...+.+++|+|++++|++++.++ .|++|++++++... +..+...+.+++|+|++++|++++.
T Consensus 106 lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg-~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~ 184 (321)
T 3ow8_A 106 LWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVG-KVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAI 184 (321)
T ss_dssp EEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTS-EEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEET
T ss_pred EEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCC-cEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcC
Confidence 999999999988988999999999999999999999887 99999999987776 7778888999999999999999998
Q ss_pred cCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEc
Q 014755 153 RDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWS 231 (419)
Q Consensus 153 ~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s 231 (419)
| +.|++||+++++.+..+..|...|.+++|+|++++|++ ++.|+.|++||+ .++....+..|.. .|.+++|+
T Consensus 185 d---g~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s--~s~dg~i~iwd~~~~~~~~~~~~h~~--~v~~~~~s 257 (321)
T 3ow8_A 185 D---GIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVT--ASDDGYIKIYDVQHANLAGTLSGHAS--WVLNVAFC 257 (321)
T ss_dssp T---SCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEE--ECTTSCEEEEETTTCCEEEEECCCSS--CEEEEEEC
T ss_pred C---CeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEE--EcCCCeEEEEECCCcceeEEEcCCCC--ceEEEEEC
Confidence 7 89999999999999999999999999999999999998 677999999999 7788888877666 89999999
Q ss_pred cCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEE
Q 014755 232 PCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRY 311 (419)
Q Consensus 232 ~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (419)
|++++|++++.|++|++||+.+++++..+.
T Consensus 258 p~~~~l~s~s~D~~v~iwd~~~~~~~~~~~-------------------------------------------------- 287 (321)
T 3ow8_A 258 PDDTHFVSSSSDKSVKVWDVGTRTCVHTFF-------------------------------------------------- 287 (321)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEEC--------------------------------------------------
T ss_pred CCCCEEEEEeCCCcEEEEeCCCCEEEEEEc--------------------------------------------------
Confidence 999999999999999999999988877753
Q ss_pred EeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeecc
Q 014755 312 EVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDIC 365 (419)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~ 365 (419)
+|...|.+++|+|++++|++++.| +.|+|||..
T Consensus 288 -------------------~h~~~v~~v~~s~~g~~l~s~~~d--~~i~vwd~p 320 (321)
T 3ow8_A 288 -------------------DHQDQVWGVKYNGNGSKIVSVGDD--QEIHIYDCP 320 (321)
T ss_dssp -------------------CCSSCEEEEEECTTSSEEEEEETT--CCEEEEECC
T ss_pred -------------------CCCCcEEEEEECCCCCEEEEEeCC--CeEEEEeCC
Confidence 477779999999999999999999 999999963
No 10
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.3e-47 Score=340.80 Aligned_cols=279 Identities=16% Similarity=0.290 Sum_probs=253.2
Q ss_pred cccccC---eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCc
Q 014755 7 YKQTGP---SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPE 81 (419)
Q Consensus 7 ~~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~ 81 (419)
.+|... ++|+|++++|++|+ |+.|+|||+.+++....+. |.+.|.+++|+|++++|++++.| ++|++||+.+++
T Consensus 105 ~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D-~~i~iwd~~~~~ 183 (410)
T 1vyh_C 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD-MTIKLWDFQGFE 183 (410)
T ss_dssp ECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETT-SCCCEEETTSSC
T ss_pred cccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCC-CeEEEEeCCCCc
Confidence 356555 78999999999998 8899999999998877664 99999999999999999999977 899999999999
Q ss_pred ceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEE
Q 014755 82 WTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYIN 160 (419)
Q Consensus 82 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~ 160 (419)
.+..+.+|...|.+++|+|++++|++++.|+ .|++||++++.+.. +..|...+.++.++|++.++++++.| +.|+
T Consensus 184 ~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~-~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D---~~v~ 259 (410)
T 1vyh_C 184 CIRTMHGHDHNVSSVSIMPNGDHIVSASRDK-TIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND---QTVR 259 (410)
T ss_dssp EEECCCCCSSCEEEEEECSSSSEEEEEETTS-EEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETT---SCEE
T ss_pred eeEEEcCCCCCEEEEEEeCCCCEEEEEeCCC-eEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCC---CeEE
Confidence 9989999999999999999999999999988 99999999998877 88899999999999999999999987 8999
Q ss_pred EEeccCCeEEEEEeccccceeeeeECCC--------------------CCeEEEEcCCCCceEEEEcC-CCceEEEEeec
Q 014755 161 LLSCHTWEIMGVFAVDTLDLADIEWSPD--------------------DSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAY 219 (419)
Q Consensus 161 i~d~~~~~~~~~~~~~~~~v~~~~~~~~--------------------~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~ 219 (419)
+||+++++....+..|...|.+++|+|+ +.++++ ++.|+.|++||+ ++.++..+..|
T Consensus 260 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~s--gs~D~~i~iwd~~~~~~~~~~~~h 337 (410)
T 1vyh_C 260 VWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS--GSRDKTIKMWDVSTGMCLMTLVGH 337 (410)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEE--EETTSEEEEEETTTTEEEEEEECC
T ss_pred EEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEE--EeCCCeEEEEECCCCceEEEEECC
Confidence 9999999999999999999999999997 556777 677999999999 88888888877
Q ss_pred CCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCcccccc
Q 014755 220 ESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGN 299 (419)
Q Consensus 220 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (419)
.. .|.+++|+|++++|++++.|++|++||+.+++++..+.
T Consensus 338 ~~--~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~-------------------------------------- 377 (410)
T 1vyh_C 338 DN--WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN-------------------------------------- 377 (410)
T ss_dssp SS--CEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEE--------------------------------------
T ss_pred CC--cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEc--------------------------------------
Confidence 66 89999999999999999999999999998887766653
Q ss_pred ccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeecc
Q 014755 300 SDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDIC 365 (419)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~ 365 (419)
+|...|++++|+|++.+|++|+.| ++|++|+++
T Consensus 378 -------------------------------~h~~~v~~l~~~~~~~~l~sgs~D--~~i~vW~~r 410 (410)
T 1vyh_C 378 -------------------------------AHEHFVTSLDFHKTAPYVVTGSVD--QTVKVWECR 410 (410)
T ss_dssp -------------------------------CCSSCEEEEEECSSSSCEEEEETT--SEEEEEC--
T ss_pred -------------------------------CCCCcEEEEEEcCCCCEEEEEeCC--CcEEEEeCC
Confidence 477789999999999999999999 999999863
No 11
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.7e-46 Score=328.48 Aligned_cols=284 Identities=16% Similarity=0.246 Sum_probs=252.3
Q ss_pred EeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC
Q 014755 43 LFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN 122 (419)
Q Consensus 43 ~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~ 122 (419)
+.+|.+.|.+++|+|++++|++++.| |+|++||..+++....+..|...|.+++|+|++..+++++.|+ .+++|++..
T Consensus 60 l~gH~~~V~~~~~s~d~~~l~s~s~D-g~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~-~i~v~~~~~ 137 (354)
T 2pbi_B 60 LKGHGNKVLCMDWCKDKRRIVSSSQD-GKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDN-KCSVYPLTF 137 (354)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETT-SEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTS-EEEEEECCC
T ss_pred ecCCCCeEEEEEECCCCCEEEEEeCC-CeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCC-CEEEEEEec
Confidence 45699999999999999999999977 8999999999988888888999999999999999999999988 999999864
Q ss_pred C-------eEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECC--CCCeEE
Q 014755 123 T-------ACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSP--DDSAIV 193 (419)
Q Consensus 123 ~-------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~ 193 (419)
. ....+..|...+.+++|+|++..|++++.| ++|++||+++++.+..+..|...+.+++|+| ++..++
T Consensus 138 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D---~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~ 214 (354)
T 2pbi_B 138 DKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGD---GTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFV 214 (354)
T ss_dssp CTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETT---SEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEE
T ss_pred cccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCC---CcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEE
Confidence 3 122366788999999999999999999987 8999999999999999999999999999988 467888
Q ss_pred EEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCcc
Q 014755 194 IWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFP 272 (419)
Q Consensus 194 ~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~ 272 (419)
+ ++.|+.|++||+ +++.+..+..|.. .|.+++|+|++++|++++.|++|++||+++++.+..+...
T Consensus 215 s--gs~Dg~v~~wd~~~~~~~~~~~~h~~--~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~--------- 281 (354)
T 2pbi_B 215 S--GGCDKKAMVWDMRSGQCVQAFETHES--DVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKE--------- 281 (354)
T ss_dssp E--EETTSCEEEEETTTCCEEEEECCCSS--CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCT---------
T ss_pred E--EeCCCeEEEEECCCCcEEEEecCCCC--CeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCC---------
Confidence 7 677999999999 8888888887766 8999999999999999999999999999887765544311
Q ss_pred ceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEec
Q 014755 273 AVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRN 352 (419)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 352 (419)
.+...+.+++|+|+|++|++++
T Consensus 282 ----------------------------------------------------------~~~~~~~~~~~s~~g~~l~~g~ 303 (354)
T 2pbi_B 282 ----------------------------------------------------------SIIFGASSVDFSLSGRLLFAGY 303 (354)
T ss_dssp ----------------------------------------------------------TCCSCEEEEEECTTSSEEEEEE
T ss_pred ----------------------------------------------------------CcccceeEEEEeCCCCEEEEEE
Confidence 1233578999999999999999
Q ss_pred CCCCceEEEeeccCCCceeec-ccCCCeeEEEeCCCCCeEEEEeCCCcEEEee
Q 014755 353 DSMPTTLWIWDICRQEPAAIL-VQKDPIRAATWDPTCTRLVLCTGSSHLYMWT 404 (419)
Q Consensus 353 ~d~~~~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~ 404 (419)
.| +.|++||+.+++.+..+ +|...|++++|+|||++|++++.||+|++|+
T Consensus 304 ~d--~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 304 ND--YTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp TT--SCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred CC--CcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 99 99999999998877655 6999999999999999999999999999996
No 12
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=8.2e-48 Score=334.24 Aligned_cols=297 Identities=13% Similarity=0.179 Sum_probs=237.3
Q ss_pred EEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccC-----------CcceeeeecCCccEeEEEE
Q 014755 30 LVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQ-----------PEWTCKIDEGLAGIAYARW 98 (419)
Q Consensus 30 i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~-----------~~~~~~~~~~~~~v~~~~~ 98 (419)
.+.|++....+ ..|...|.+++|+|||++|++++ + +++++||... .........+...|.+++|
T Consensus 16 ~r~w~~~~~~~---~~~~~~v~~~~fs~dG~~l~~~s-d-~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 90 (344)
T 4gqb_B 16 AREWNLPPNAP---ACMERQLEAARYRSDGALLLGAS-S-LSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTW 90 (344)
T ss_dssp -------CCSC---SSCCSEEEEEEECTTSCEEEEEE-C-CSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEE
T ss_pred ccccCCCCCCc---ccccCCEEEEEECCCCCEEEEEe-C-CceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEE
Confidence 34566654432 23667899999999999999887 5 5777776321 1112223345678999999
Q ss_pred CCCCCEEEEEecCCCeEEEEEcCCCeEEE-----eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEE
Q 014755 99 SPDSRHILTTSDFQLRLTVWSLLNTACVH-----VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVF 173 (419)
Q Consensus 99 ~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~ 173 (419)
+|++ .|++++.++ .|++||+++++... ..+|...|.+++|+|++++|++++.| +.|++||+++++.+..+
T Consensus 91 s~d~-~l~~~s~dg-~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d---~~i~iwd~~~~~~~~~~ 165 (344)
T 4gqb_B 91 VGER-GILVASDSG-AVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD---ICIKVWDLAQQVVLSSY 165 (344)
T ss_dssp ETTT-EEEEEETTS-EEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT---SCEEEEETTTTEEEEEE
T ss_pred eCCC-eEEEEECCC-EEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC---CeEEEEECCCCcEEEEE
Confidence 9985 678888887 99999999875432 45789999999999999999999987 89999999999999999
Q ss_pred eccccceeeeeECCCCCe-EEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccC-CCeEEEEEecCcEEEEE
Q 014755 174 AVDTLDLADIEWSPDDSA-IVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPC-GQFLAVGSYDQTLRVLN 250 (419)
Q Consensus 174 ~~~~~~v~~~~~~~~~~~-l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~d~~i~v~d 250 (419)
.+|...|.+++|+|++.. ++. ++.|+.|++||+ +++....+....+...+.+++|+|+ +++|++|+.|++|++||
T Consensus 166 ~~h~~~V~~~~~~~~~~~~l~s--~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd 243 (344)
T 4gqb_B 166 RAHAAQVTCVAASPHKDSVFLS--CSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVD 243 (344)
T ss_dssp CCCSSCEEEEEECSSCTTEEEE--EETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEE
T ss_pred cCcCCceEEEEecCCCCCceee--eccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEE
Confidence 999999999999999864 455 567999999999 7888777765555447999999995 56889999999999999
Q ss_pred cCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCC
Q 014755 251 HLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKP 330 (419)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (419)
+++++++..+.
T Consensus 244 ~~~~~~~~~~~--------------------------------------------------------------------- 254 (344)
T 4gqb_B 244 TKSTSCVLSSA--------------------------------------------------------------------- 254 (344)
T ss_dssp SCC--CCEEEE---------------------------------------------------------------------
T ss_pred CCCCcEEEEEc---------------------------------------------------------------------
Confidence 99988777653
Q ss_pred CCCcceEEEEEccCC-eEEEEecCCCCceEEEeeccCCCceeecccCCCeeEEEeCCCCC-eEEEEeCCCcEEEeecCCC
Q 014755 331 NPKQGIGLMSWSSDS-QYICTRNDSMPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCT-RLVLCTGSSHLYMWTPSGA 408 (419)
Q Consensus 331 ~~~~~v~~~~~s~~g-~~l~~~~~d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~vw~~~~~ 408 (419)
+|...|++++|+|++ ++||+++.| ++|+|||+.++++....+|.+.|++++|+|+++ +|++++.|++|++|++.+.
T Consensus 255 ~h~~~v~~v~fsp~g~~~lasgs~D--~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 255 VHSQCVTGLVFSPHSVPFLASLSED--CSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp CCSSCEEEEEECSSSSCCEEEEETT--SCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred CCCCCEEEEEEccCCCeEEEEEeCC--CeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 477789999999998 589999999 999999999999888888999999999999987 5779999999999999865
Q ss_pred e
Q 014755 409 Y 409 (419)
Q Consensus 409 ~ 409 (419)
.
T Consensus 333 ~ 333 (344)
T 4gqb_B 333 P 333 (344)
T ss_dssp -
T ss_pred C
Confidence 4
No 13
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8e-47 Score=340.16 Aligned_cols=314 Identities=13% Similarity=0.163 Sum_probs=269.1
Q ss_pred cCeEEcCCCC-EEEEEe-CCeEEEEec----CCCc------EEEEee-----------cCcceeEEEEecCCCeEEEEec
Q 014755 11 GPSCFSPNAR-YIAVAV-DYRLVVRDA----HSFK------VVQLFS-----------CLDKISYIEWALDSEYILCGLY 67 (419)
Q Consensus 11 ~~~~~s~d~~-~la~~~-~~~i~i~~~----~~~~------~~~~~~-----------~~~~v~~~~~s~~~~~l~~~~~ 67 (419)
..++|+|+|+ +||+++ ++.|++|++ .+++ ....+. |.+.|.+++|+|++++|++++.
T Consensus 49 ~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 128 (425)
T 1r5m_A 49 VSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVE 128 (425)
T ss_dssp SEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEET
T ss_pred EEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeC
Confidence 3489999999 999998 789999999 8887 344333 4669999999999999999997
Q ss_pred cCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCC------------
Q 014755 68 KRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHA------------ 134 (419)
Q Consensus 68 ~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~------------ 134 (419)
+ |.|++|| .+++.+..+..|...|.+++|+|++++|++++.++ .|++||+++++... +..+...
T Consensus 129 d-g~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (425)
T 1r5m_A 129 N-GELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVEN-VTILWNVISGTVMQHFELKETGGSSINAENHSGD 205 (425)
T ss_dssp T-SCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTC-CEEEEETTTTEEEEEECCC---------------
T ss_pred C-CeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCC-eEEEEECCCCcEEEEeeccccCccceeeccccCC
Confidence 7 8999999 67778888889999999999999999999999987 99999999988877 5555555
Q ss_pred ---eeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CC
Q 014755 135 ---SKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DG 210 (419)
Q Consensus 135 ---~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~ 210 (419)
+.+++|+|++ .+++++.+ |.|++||+++++.+..+..|...+.+++|+|+++++++ ++.++.|++||+ ++
T Consensus 206 ~~~~~~~~~~~~~-~~~~~~~~---g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~--~~~d~~i~i~d~~~~ 279 (425)
T 1r5m_A 206 GSLGVDVEWVDDD-KFVIPGPK---GAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLS--ASDDGTLRIWHGGNG 279 (425)
T ss_dssp CCCBSCCEEEETT-EEEEECGG---GCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEE--EETTSCEEEECSSSB
T ss_pred cceeeEEEEcCCC-EEEEEcCC---CeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEE--EcCCCEEEEEECCCC
Confidence 8999999986 46777765 89999999999998899999999999999999999988 567899999999 77
Q ss_pred ceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeee
Q 014755 211 RCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELC 290 (419)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (419)
+.+..+..+.. .+.+++|+|++ ++++++.|+.|++||+.+++.+..+.
T Consensus 280 ~~~~~~~~~~~--~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~----------------------------- 327 (425)
T 1r5m_A 280 NSQNCFYGHSQ--SIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSI----------------------------- 327 (425)
T ss_dssp SCSEEECCCSS--CEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEE-----------------------------
T ss_pred ccceEecCCCc--cEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecc-----------------------------
Confidence 77888876655 89999999999 99999999999999999888766653
Q ss_pred ccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCC--
Q 014755 291 LNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQE-- 368 (419)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~-- 368 (419)
.|...|.+++|+|++++|++++.| +.|++||+.+++
T Consensus 328 ----------------------------------------~~~~~i~~~~~s~~~~~l~~~~~d--g~i~i~~~~~~~~~ 365 (425)
T 1r5m_A 328 ----------------------------------------VDGVPIFAGRISQDGQKYAVAFMD--GQVNVYDLKKLNSK 365 (425)
T ss_dssp ----------------------------------------CTTCCEEEEEECTTSSEEEEEETT--SCEEEEECHHHHC-
T ss_pred ----------------------------------------cCCccEEEEEEcCCCCEEEEEECC--CeEEEEECCCCccc
Confidence 255678999999999999999998 999999999877
Q ss_pred ------------------ceeec-ccCC--CeeEEEeCCCCCeEEEEeCCCcEEEeecCC
Q 014755 369 ------------------PAAIL-VQKD--PIRAATWDPTCTRLVLCTGSSHLYMWTPSG 407 (419)
Q Consensus 369 ------------------~~~~~-~~~~--~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 407 (419)
++..+ +|.. .|++++|+|++++|++++.||.|++|++++
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~g 425 (425)
T 1r5m_A 366 SRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIPG 425 (425)
T ss_dssp -------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECCC
T ss_pred eeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeecC
Confidence 55555 4765 999999999999999999999999999864
No 14
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.8e-46 Score=327.34 Aligned_cols=311 Identities=14% Similarity=0.205 Sum_probs=268.7
Q ss_pred CeEEcCCCCEEEEEe-CCeEEEEecCC-CcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceee---e
Q 014755 12 PSCFSPNARYIAVAV-DYRLVVRDAHS-FKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCK---I 86 (419)
Q Consensus 12 ~~~~s~d~~~la~~~-~~~i~i~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~---~ 86 (419)
.++|+|||++++++. ++.+.+|.... .+.....+|.+.|.+++|+|++++|++++ + |.|++||+.+++.... +
T Consensus 14 ~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-d-g~i~iw~~~~~~~~~~~~~~ 91 (337)
T 1gxr_A 14 SFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-K-GCVKVWDISHPGNKSPVSQL 91 (337)
T ss_dssp EEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-B-SEEEEEETTSTTCCSCSEEE
T ss_pred EEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-C-CeEEEEECCCCCceeeeecc
Confidence 389999999999887 55566655443 44555678999999999999999999998 6 8999999987753322 2
Q ss_pred e--cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCe--EEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEE
Q 014755 87 D--EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTA--CVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINL 161 (419)
Q Consensus 87 ~--~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~--~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i 161 (419)
. .|...|.+++|+|++++|++++.++ .|++||+++++ ... +..+...+.+++|+|+++++++++.+ |.|++
T Consensus 92 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---g~v~~ 167 (337)
T 1gxr_A 92 DCLNRDNYIRSCKLLPDGCTLIVGGEAS-TLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD---GNIAV 167 (337)
T ss_dssp ECSCTTSBEEEEEECTTSSEEEEEESSS-EEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETT---SCEEE
T ss_pred cccCCCCcEEEEEEcCCCCEEEEEcCCC-cEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCC---CcEEE
Confidence 2 6888999999999999999999887 99999999876 333 67788889999999999999999886 89999
Q ss_pred EeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEE
Q 014755 162 LSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVG 240 (419)
Q Consensus 162 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 240 (419)
||+++++.+..+..|...+.+++|+|+++.+++ ++.++.|++||+ +++.+..+.. .. .+.+++|+|++++++++
T Consensus 168 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~--~~~dg~i~~~d~~~~~~~~~~~~-~~--~v~~~~~s~~~~~l~~~ 242 (337)
T 1gxr_A 168 WDLHNQTLVRQFQGHTDGASCIDISNDGTKLWT--GGLDNTVRSWDLREGRQLQQHDF-TS--QIFSLGYCPTGEWLAVG 242 (337)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECTTSSEEEE--EETTSEEEEEETTTTEEEEEEEC-SS--CEEEEEECTTSSEEEEE
T ss_pred EeCCCCceeeeeecccCceEEEEECCCCCEEEE--EecCCcEEEEECCCCceEeeecC-CC--ceEEEEECCCCCEEEEE
Confidence 999999999999999999999999999999998 567999999999 6766666543 33 79999999999999999
Q ss_pred EecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCC
Q 014755 241 SYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISL 320 (419)
Q Consensus 241 ~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (419)
+.++.|++||+.+++....
T Consensus 243 ~~~~~i~~~~~~~~~~~~~------------------------------------------------------------- 261 (337)
T 1gxr_A 243 MESSNVEVLHVNKPDKYQL------------------------------------------------------------- 261 (337)
T ss_dssp ETTSCEEEEETTSSCEEEE-------------------------------------------------------------
T ss_pred cCCCcEEEEECCCCCeEEE-------------------------------------------------------------
Confidence 9999999999987654321
Q ss_pred CCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecccCCCeeEEEeCCCCCeEEEEeCCCcE
Q 014755 321 PFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCTRLVLCTGSSHL 400 (419)
Q Consensus 321 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i 400 (419)
..|...|.+++|+|++++|++++.| +.|++||+.+++......|...|++++|+|++++|++++.||.|
T Consensus 262 ---------~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 330 (337)
T 1gxr_A 262 ---------HLHESCVLSLKFAYCGKWFVSTGKD--NLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKA 330 (337)
T ss_dssp ---------CCCSSCEEEEEECTTSSEEEEEETT--SEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCE
T ss_pred ---------cCCccceeEEEECCCCCEEEEecCC--CcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCCCeE
Confidence 1366779999999999999999998 99999999999988777899999999999999999999999999
Q ss_pred EEeec
Q 014755 401 YMWTP 405 (419)
Q Consensus 401 ~vw~~ 405 (419)
++|++
T Consensus 331 ~iw~~ 335 (337)
T 1gxr_A 331 TVYEV 335 (337)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99997
No 15
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.4e-46 Score=319.93 Aligned_cols=286 Identities=13% Similarity=0.163 Sum_probs=249.1
Q ss_pred EeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC
Q 014755 43 LFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN 122 (419)
Q Consensus 43 ~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~ 122 (419)
..+|.+.|.+++|+|++++|++++.| |+|++||+++++.+..+..|..+|.+++|+|++++|++++.|+ .|++||+++
T Consensus 9 ~~~h~~~V~~~~fsp~~~~l~s~~~d-g~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~-~i~vwd~~~ 86 (304)
T 2ynn_A 9 FSNRSDRVKGIDFHPTEPWVLTTLYS-GRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDF-RIRVFNYNT 86 (304)
T ss_dssp EEEECSCEEEEEECSSSSEEEEEETT-SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTS-EEEEEETTT
T ss_pred ecCCCCceEEEEECCCCCEEEEEcCC-CcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCC-EEEEEECCC
Confidence 44599999999999999999999977 8999999999999999999999999999999999999999988 999999999
Q ss_pred CeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCC-eEEEEEeccccceeeeeECC-CCCeEEEEcCCC
Q 014755 123 TACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTW-EIMGVFAVDTLDLADIEWSP-DDSAIVIWDSPL 199 (419)
Q Consensus 123 ~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~ 199 (419)
++.+. +..|...+.+++|+|++++|++++.| ++|++||++++ .....+.+|...|.+++|+| ++..+++ ++.
T Consensus 87 ~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D---~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s--gs~ 161 (304)
T 2ynn_A 87 GEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDD---LTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFAS--GCL 161 (304)
T ss_dssp CCEEEEEECCSSCEEEEEECSSSSEEEEEETT---SCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEE--EET
T ss_pred CcEEEEEeCCCCcEEEEEEcCCCCEEEEECCC---CeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEE--EeC
Confidence 88877 88899999999999999999999987 89999999887 56677889999999999999 5677887 677
Q ss_pred CceEEEEcC-CCceEEEEeecCCCCceeEEEEcc--CCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceec
Q 014755 200 EYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSP--CGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFK 276 (419)
Q Consensus 200 ~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (419)
|+.|++||+ .+.....+..+ +...+..+.|+| ++++|++++.|++|++||+++++++..+.
T Consensus 162 D~~v~iwd~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~--------------- 225 (304)
T 2ynn_A 162 DRTVKVWSLGQSTPNFTLTTG-QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE--------------- 225 (304)
T ss_dssp TSEEEEEETTCSSCSEEEECC-CTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEE---------------
T ss_pred CCeEEEEECCCCCccceeccC-CcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeC---------------
Confidence 999999999 55555554432 223788999987 77899999999999999999988877654
Q ss_pred cCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCC
Q 014755 277 EVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMP 356 (419)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~ 356 (419)
+|...|.+++|+|++++|++++.|
T Consensus 226 ------------------------------------------------------~h~~~v~~~~~~p~~~~l~s~s~D-- 249 (304)
T 2ynn_A 226 ------------------------------------------------------GHMSNVSFAVFHPTLPIIISGSED-- 249 (304)
T ss_dssp ------------------------------------------------------CCSSCEEEEEECSSSSEEEEEETT--
T ss_pred ------------------------------------------------------CCCCCEEEEEECCCCCEEEEEcCC--
Confidence 477789999999999999999999
Q ss_pred ceEEEeeccCCCceeecc-cCCCeeEEEeCCCCC--eEEEEeCCCcEEEeecCCC
Q 014755 357 TTLWIWDICRQEPAAILV-QKDPIRAATWDPTCT--RLVLCTGSSHLYMWTPSGA 408 (419)
Q Consensus 357 ~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~--~l~s~~~dg~i~vw~~~~~ 408 (419)
++|++||+.++++...+. |...+++++|+|++. ++++++.| .+.+|++...
T Consensus 250 g~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~-g~~~~~~~~~ 303 (304)
T 2ynn_A 250 GTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDN-GFTVLSLGND 303 (304)
T ss_dssp SCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETT-EEEEEECC--
T ss_pred CeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCC-ceEEEEeccC
Confidence 999999999999887775 889999999999886 57777655 5788887653
No 16
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.1e-47 Score=339.82 Aligned_cols=308 Identities=14% Similarity=0.207 Sum_probs=262.0
Q ss_pred eEEEEecCCCcEEEEe-ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEE
Q 014755 29 RLVVRDAHSFKVVQLF-SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILT 107 (419)
Q Consensus 29 ~i~i~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 107 (419)
.+..|+.....+.+.+ +|.+.|++++|+|++++|++++.| |+|+|||+.+++....+..|...|.+++|+|++++|++
T Consensus 47 ~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D-~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las 125 (380)
T 3iz6_a 47 TAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQD-GRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVAC 125 (380)
T ss_dssp GCCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETT-SEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEE
T ss_pred cccccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCC-CeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEE
Confidence 3456777666666654 599999999999999999999977 89999999999999999999999999999999999999
Q ss_pred EecCCCeEEEEEcCCCe-------EE-EeccCCCCeeeEEEccCC-CEEEEEeecCCCCeEEEEeccCCeEEEEE-----
Q 014755 108 TSDFQLRLTVWSLLNTA-------CV-HVQSPKHASKGVAFTQDG-KFAAICTRRDCKDYINLLSCHTWEIMGVF----- 173 (419)
Q Consensus 108 ~~~~~~~i~iwd~~~~~-------~~-~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~g~v~i~d~~~~~~~~~~----- 173 (419)
++.|+ .+++||+.+.. .. .+.+|...+.++.|+|++ ..|++++.| ++|++||+++++.+..+
T Consensus 126 ~~~d~-~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D---~~i~~wd~~~~~~~~~~~~~~~ 201 (380)
T 3iz6_a 126 GGLDS-ACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGD---QTCVLWDVTTGQRISIFGSEFP 201 (380)
T ss_dssp CCSSS-CCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTT---SCEEEECTTTCCEEEEECCCSS
T ss_pred eeCCC-cEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCC---CcEEEEEcCCCcEEEEeecccC
Confidence 99988 99999997532 11 256788889999999975 568888887 89999999999988777
Q ss_pred eccccceeeeeECC-CCCeEEEEcCCCCceEEEEcC--CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEE
Q 014755 174 AVDTLDLADIEWSP-DDSAIVIWDSPLEYKVLIYSP--DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLN 250 (419)
Q Consensus 174 ~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~i~~~d~--~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d 250 (419)
..|...+.++.|+| ++..+++ ++.|+.|++||+ .++.+..+..|.. .|.+++|+|++++|++++.|++|++||
T Consensus 202 ~~h~~~v~~~~~~~~~~~~l~s--gs~D~~v~~wd~~~~~~~~~~~~~h~~--~v~~v~~~p~~~~l~s~s~D~~i~lwd 277 (380)
T 3iz6_a 202 SGHTADVLSLSINSLNANMFIS--GSCDTTVRLWDLRITSRAVRTYHGHEG--DINSVKFFPDGQRFGTGSDDGTCRLFD 277 (380)
T ss_dssp SSCCSCEEEEEECSSSCCEEEE--EETTSCEEEEETTTTCCCCEEECCCSS--CCCEEEECTTSSEEEEECSSSCEEEEE
T ss_pred CCCccCeEEEEeecCCCCEEEE--EECCCeEEEEECCCCCcceEEECCcCC--CeEEEEEecCCCeEEEEcCCCeEEEEE
Confidence 56788999999987 7788887 677999999998 4567777877766 899999999999999999999999999
Q ss_pred cCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCC
Q 014755 251 HLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKP 330 (419)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (419)
+++++.+..+...... ..
T Consensus 278 ~~~~~~~~~~~~~~~~--------------------------------------------------------------~~ 295 (380)
T 3iz6_a 278 MRTGHQLQVYNREPDR--------------------------------------------------------------ND 295 (380)
T ss_dssp TTTTEEEEEECCCCSS--------------------------------------------------------------SC
T ss_pred CCCCcEEEEecccccc--------------------------------------------------------------cc
Confidence 9999888776521110 01
Q ss_pred CCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec-----ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeec
Q 014755 331 NPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL-----VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTP 405 (419)
Q Consensus 331 ~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 405 (419)
.+...|++++|+|+|++|++|+.| |.|++||+.+++....+ +|.+.|++++|+|+|++|++|+.||+|++|++
T Consensus 296 ~~~~~v~~~~~s~~g~~l~~g~~d--g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~ 373 (380)
T 3iz6_a 296 NELPIVTSVAFSISGRLLFAGYSN--GDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAF 373 (380)
T ss_dssp CSSCSCSEEEECSSSSEEEEECTT--SCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEEC
T ss_pred cccCceEEEEECCCCCEEEEEECC--CCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEec
Confidence 133457899999999999999999 99999999988876544 59999999999999999999999999999999
Q ss_pred CCCe
Q 014755 406 SGAY 409 (419)
Q Consensus 406 ~~~~ 409 (419)
.+.+
T Consensus 374 ~~~~ 377 (380)
T 3iz6_a 374 SGHR 377 (380)
T ss_dssp CSSS
T ss_pred CCCc
Confidence 8764
No 17
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.4e-46 Score=325.22 Aligned_cols=279 Identities=15% Similarity=0.214 Sum_probs=247.0
Q ss_pred hcccccC---eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC
Q 014755 6 AYKQTGP---SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP 80 (419)
Q Consensus 6 ~~~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~ 80 (419)
..+|... ++|+||+++|++++ |+.|+|||+.+++.+..+. |...|.+++|+|++++|++++.| +.|++|++.++
T Consensus 51 l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-~~v~iw~~~~~ 129 (340)
T 1got_B 51 LRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLD-NICSIYNLKTR 129 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETT-CEEEEEETTTC
T ss_pred ecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCC-CeEEEEECccC
Confidence 3466665 78999999999998 8999999999998877665 88899999999999999999977 89999999876
Q ss_pred c----ceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCC
Q 014755 81 E----WTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDC 155 (419)
Q Consensus 81 ~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 155 (419)
+ ....+.+|...|.++.|++++. +++++.|+ .|++||+++++... +..|...+.+++|+|+++++++++.|
T Consensus 130 ~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~-~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d-- 205 (340)
T 1got_B 130 EGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDT-TCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACD-- 205 (340)
T ss_dssp SBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTS-CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT--
T ss_pred CCcceeEEEecCCCccEEEEEECCCCc-EEEEECCC-cEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCC--
Confidence 3 4456778999999999998875 88888887 99999999998877 78899999999999999999999987
Q ss_pred CCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCC
Q 014755 156 KDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCG 234 (419)
Q Consensus 156 ~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~ 234 (419)
+.|++||+++++....+..|...|.+++|+|+++++++ ++.|+.|++||+ .++.+..+........|.+++|+|+|
T Consensus 206 -~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s--~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g 282 (340)
T 1got_B 206 -ASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFAT--GSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSG 282 (340)
T ss_dssp -SCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEE--EETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTS
T ss_pred -CcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEE--EcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCC
Confidence 89999999999999999999999999999999999998 677999999999 66666666544444479999999999
Q ss_pred CeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEec
Q 014755 235 QFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVM 314 (419)
Q Consensus 235 ~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (419)
++|++|+.|+.|++||+.+++.+..+.
T Consensus 283 ~~l~~g~~d~~i~vwd~~~~~~~~~~~----------------------------------------------------- 309 (340)
T 1got_B 283 RLLLAGYDDFNCNVWDALKADRAGVLA----------------------------------------------------- 309 (340)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEE-----------------------------------------------------
T ss_pred CEEEEECCCCeEEEEEcccCcEeeEee-----------------------------------------------------
Confidence 999999999999999998877665543
Q ss_pred cCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEee
Q 014755 315 EIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWD 363 (419)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd 363 (419)
+|...|.+++|+|+|++||+|+.| +.|+|||
T Consensus 310 ----------------~h~~~v~~~~~s~dg~~l~s~s~D--~~i~iWd 340 (340)
T 1got_B 310 ----------------GHDNRVSCLGVTDDGMAVATGSWD--SFLKIWN 340 (340)
T ss_dssp ----------------CCSSCEEEEEECTTSSCEEEEETT--SCEEEEC
T ss_pred ----------------cCCCcEEEEEEcCCCCEEEEEcCC--ccEEecC
Confidence 478889999999999999999999 9999997
No 18
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-48 Score=348.29 Aligned_cols=320 Identities=11% Similarity=0.169 Sum_probs=270.3
Q ss_pred cccCeEEcCCCC-EEEEE----------e-CCeEEEEecCCCc---EEEEeecCcceeEEEEecCCCeEEEEeccCCeEE
Q 014755 9 QTGPSCFSPNAR-YIAVA----------V-DYRLVVRDAHSFK---VVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQ 73 (419)
Q Consensus 9 ~~~~~~~s~d~~-~la~~----------~-~~~i~i~~~~~~~---~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~ 73 (419)
....++|+|+|+ +||++ + ++.|+|||+.+++ .+..+.|...|.+++|+|++++|++++.| |.|+
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-g~v~ 92 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDN-GSLE 92 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESS-SCEE
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccC-CeEE
Confidence 345589999997 99998 5 7789999999875 45556789999999999999999999976 8999
Q ss_pred EEEccC----CcceeeeecCCccEeEEEECCC-CCEEEEEecCCCeEEEEEcCCCe------EEE----eccCCCCeeeE
Q 014755 74 AWSLTQ----PEWTCKIDEGLAGIAYARWSPD-SRHILTTSDFQLRLTVWSLLNTA------CVH----VQSPKHASKGV 138 (419)
Q Consensus 74 iw~~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~~i~iwd~~~~~------~~~----~~~~~~~~~~~ 138 (419)
+||+.+ .+....+..|...|.+++|+|+ +++|++++.++ .|++||+.+++ ... ...+...+.++
T Consensus 93 vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 171 (416)
T 2pm9_A 93 LYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNG-EIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISL 171 (416)
T ss_dssp EECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSS-CEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEE
T ss_pred EeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCC-eEEEEECCCCccccccccccccccccCCCCCeeEE
Confidence 999987 3567778889999999999998 88999999887 99999999876 222 35677889999
Q ss_pred EEccC-CCEEEEEeecCCCCeEEEEeccCCeEEEEEecc------ccceeeeeECCCCC-eEEEEcCCCCc---eEEEEc
Q 014755 139 AFTQD-GKFAAICTRRDCKDYINLLSCHTWEIMGVFAVD------TLDLADIEWSPDDS-AIVIWDSPLEY---KVLIYS 207 (419)
Q Consensus 139 ~~~~~-~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~------~~~v~~~~~~~~~~-~l~~~~~~~~~---~i~~~d 207 (419)
+|+|+ +.++++++.+ +.|++||+++++.+..+..+ ...+.+++|+|++. .+++ +..++ .|++||
T Consensus 172 ~~~~~~~~~l~~~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~--~~~d~~~~~i~~~d 246 (416)
T 2pm9_A 172 AWNQSLAHVFASAGSS---NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVAT--ATGSDNDPSILIWD 246 (416)
T ss_dssp EECSSCTTEEEEESSS---SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEE--EECCSSSCCCCEEE
T ss_pred EeCCCCCcEEEEEcCC---CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEE--EECCCCCceEEEEe
Confidence 99999 6888888876 89999999999999888876 78899999999984 6666 45566 999999
Q ss_pred C-CC-ceEEEEe-ecCCCCceeEEEEcc-CCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCccc
Q 014755 208 P-DG-RCLLKYQ-AYESGLGVKSISWSP-CGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQ 283 (419)
Q Consensus 208 ~-~~-~~~~~~~-~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (419)
+ ++ ..+..+. .|.. .|.+++|+| ++++|++++.|+.|++||+.+++++..+.
T Consensus 247 ~~~~~~~~~~~~~~~~~--~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~---------------------- 302 (416)
T 2pm9_A 247 LRNANTPLQTLNQGHQK--GILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFP---------------------- 302 (416)
T ss_dssp TTSTTSCSBCCCSCCSS--CEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEE----------------------
T ss_pred CCCCCCCcEEeecCccC--ceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeec----------------------
Confidence 9 44 5555555 5554 899999999 99999999999999999999988777654
Q ss_pred ccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCC-eEEEEecCCCCceEEEe
Q 014755 284 LDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDS-QYICTRNDSMPTTLWIW 362 (419)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~d~~~~i~iw 362 (419)
.|...|.+++|+|++ ++|++++.| +.|++|
T Consensus 303 -----------------------------------------------~~~~~v~~~~~s~~~~~~l~s~~~d--~~i~iw 333 (416)
T 2pm9_A 303 -----------------------------------------------ARGNWCFKTKFAPEAPDLFACASFD--NKIEVQ 333 (416)
T ss_dssp -----------------------------------------------CSSSCCCCEEECTTCTTEEEECCSS--SEEEEE
T ss_pred -----------------------------------------------CCCCceEEEEECCCCCCEEEEEecC--CcEEEE
Confidence 356678899999999 899999999 999999
Q ss_pred eccCCCceeec------------------------------------ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 363 DICRQEPAAIL------------------------------------VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 363 d~~~~~~~~~~------------------------------------~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
|+.+.+..... .|..++++++|+|+|++|++++.|+.|+||++.
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~ 413 (416)
T 2pm9_A 334 TLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPK 413 (416)
T ss_dssp ESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCC
T ss_pred EccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEec
Confidence 99876532211 056778899999999999999999999999998
Q ss_pred CC
Q 014755 407 GA 408 (419)
Q Consensus 407 ~~ 408 (419)
+.
T Consensus 414 ~~ 415 (416)
T 2pm9_A 414 IS 415 (416)
T ss_dssp CC
T ss_pred cC
Confidence 64
No 19
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-45 Score=322.14 Aligned_cols=308 Identities=17% Similarity=0.310 Sum_probs=240.9
Q ss_pred EEEEe-ecCc-ceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceee---eecCCccEeEEEECCCCCEEEEEecCCCe
Q 014755 40 VVQLF-SCLD-KISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCK---IDEGLAGIAYARWSPDSRHILTTSDFQLR 114 (419)
Q Consensus 40 ~~~~~-~~~~-~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~~~~~ 114 (419)
++..+ +|.+ .|.+++|+|+|++||+++.| ++|+|||+.+++.... ..+|...|.+++|+|++++|++++.|+ .
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp~g~~las~~~D-~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~-~ 84 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGD-RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA-T 84 (345)
T ss_dssp EEEEECCSTTSCEEEEEECTTSSCEEEEETT-SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS-C
T ss_pred EeeeecCCCCCcEEEEEECCCCCEEEEEcCC-CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC-c
Confidence 34433 4776 89999999999999999977 8999999988764322 357889999999999999999999988 9
Q ss_pred EEEEEcCCCe--EEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCC---eEEEEEeccccceeeeeECCC
Q 014755 115 LTVWSLLNTA--CVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTW---EIMGVFAVDTLDLADIEWSPD 188 (419)
Q Consensus 115 i~iwd~~~~~--~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~---~~~~~~~~~~~~v~~~~~~~~ 188 (419)
+++||+..+. ... +..|...|.+++|+|++++|++++.| +.|++||++++ +.+..+..|...|.+++|+|+
T Consensus 85 v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D---~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 161 (345)
T 3fm0_A 85 TCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRD---KSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPS 161 (345)
T ss_dssp EEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETT---SCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSS
T ss_pred EEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECC---CeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCC
Confidence 9999998764 333 78899999999999999999999987 89999999875 345677889999999999999
Q ss_pred CCeEEEEcCCCCceEEEEcC-CCce--EEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeeccccc
Q 014755 189 DSAIVIWDSPLEYKVLIYSP-DGRC--LLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLST 265 (419)
Q Consensus 189 ~~~l~~~~~~~~~~i~~~d~-~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~ 265 (419)
++++++ ++.|+.|++||. .++. ...+..|.. .|.+++|+|+|++|++++.|++|++||.........+.
T Consensus 162 ~~~l~s--~s~d~~i~~w~~~~~~~~~~~~~~~h~~--~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~---- 233 (345)
T 3fm0_A 162 QELLAS--ASYDDTVKLYREEEDDWVCCATLEGHES--TVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVA---- 233 (345)
T ss_dssp SSCEEE--EETTSCEEEEEEETTEEEEEEEECCCSS--CEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCC----
T ss_pred CCEEEE--EeCCCcEEEEEecCCCEEEEEEecCCCC--ceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccce----
Confidence 999998 677999999999 5543 345555554 89999999999999999999999999964322111100
Q ss_pred ccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCC
Q 014755 266 VRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDS 345 (419)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g 345 (419)
... ..........+ ...|...|.+++|+|++
T Consensus 234 ---------~~~-------------------------~~~~~~~~~~~---------------~~~h~~~v~~v~~~~~~ 264 (345)
T 3fm0_A 234 ---------CSG-------------------------SDPSWKCICTL---------------SGFHSRTIYDIAWCQLT 264 (345)
T ss_dssp ---------CC----------------------------CEEEEEEEE---------------CSSCSSCEEEEEECTTT
T ss_pred ---------eec-------------------------cCCccceeEEe---------------cCCCCCcEEEEEEecCC
Confidence 000 00000000000 01277789999999999
Q ss_pred eEEEEecCCCCceEEEeeccCCCc---------eee-cccCCCeeEEEeCCCCC-eEEEEeCCCcEEEeecCCCeEE
Q 014755 346 QYICTRNDSMPTTLWIWDICRQEP---------AAI-LVQKDPIRAATWDPTCT-RLVLCTGSSHLYMWTPSGAYCV 411 (419)
Q Consensus 346 ~~l~~~~~d~~~~i~iwd~~~~~~---------~~~-~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~vw~~~~~~~~ 411 (419)
..|++++.| +.|++|+...+.. ... .+|...|++++|+|++. +||+++.||+|++|++.+++..
T Consensus 265 ~~l~s~~~d--~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~ 339 (345)
T 3fm0_A 265 GALATACGD--DAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGL 339 (345)
T ss_dssp CCEEEEETT--SCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC----
T ss_pred CEEEEEeCC--CeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCc
Confidence 999999999 9999999876431 112 25899999999999985 9999999999999999976643
No 20
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.4e-45 Score=318.17 Aligned_cols=282 Identities=11% Similarity=0.137 Sum_probs=243.9
Q ss_pred eecCcceeEEEEecCC-CeEEEEeccCCeEEEEEccCC-----cceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEE
Q 014755 44 FSCLDKISYIEWALDS-EYILCGLYKRLMIQAWSLTQP-----EWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTV 117 (419)
Q Consensus 44 ~~~~~~v~~~~~s~~~-~~l~~~~~~~g~i~iw~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~i 117 (419)
.+|.+.|.+++|+|++ ++|++++.| ++|++|++... ..+..+.+|...|.+++|+|++++|++++.|+ .|++
T Consensus 14 ~gH~~~V~~l~~~~~~~~~l~s~s~D-~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~-~v~~ 91 (319)
T 3frx_A 14 EGHNGWVTSLATSAGQPNLLLSASRD-KTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDK-TLRL 91 (319)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETT-SEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS-EEEE
T ss_pred ccccceEEEEEccCCCccEEEEecCC-ccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCC-EEEE
Confidence 3599999999999965 789999977 89999998643 34567889999999999999999999999998 9999
Q ss_pred EEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCC------
Q 014755 118 WSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDS------ 190 (419)
Q Consensus 118 wd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~------ 190 (419)
||+++++... +..|...+.+++|+|++.++++++.| +.|++||++ ++.+..+..|...+.++.|+|.+.
T Consensus 92 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D---~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 167 (319)
T 3frx_A 92 WDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRD---KTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSV 167 (319)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETT---SCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CC
T ss_pred EECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCC---CeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCcc
Confidence 9999998877 88999999999999999999999987 899999997 567778888999999999999643
Q ss_pred eEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCC
Q 014755 191 AIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGP 269 (419)
Q Consensus 191 ~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~ 269 (419)
.++. ++.|+.|++||+ +++....+..|.. .|.+++|+|++++|++++.|++|++||+.+++.+..+.
T Consensus 168 ~l~s--~~~d~~i~~wd~~~~~~~~~~~~h~~--~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~-------- 235 (319)
T 3frx_A 168 TIIS--AGNDKMVKAWNLNQFQIEADFIGHNS--NINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLS-------- 235 (319)
T ss_dssp EEEE--EETTSCEEEEETTTTEEEEEECCCCS--CEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE--------
T ss_pred EEEE--EeCCCEEEEEECCcchhheeecCCCC--cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEec--------
Confidence 6666 677999999999 7777777777665 89999999999999999999999999999988877664
Q ss_pred CccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEE
Q 014755 270 CFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYIC 349 (419)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 349 (419)
+...|.+++|+|++.+|+
T Consensus 236 --------------------------------------------------------------~~~~v~~~~~sp~~~~la 253 (319)
T 3frx_A 236 --------------------------------------------------------------AQDEVFSLAFSPNRYWLA 253 (319)
T ss_dssp --------------------------------------------------------------CCSCEEEEEECSSSSEEE
T ss_pred --------------------------------------------------------------CCCcEEEEEEcCCCCEEE
Confidence 223488999999999999
Q ss_pred EecCCCCceEEEeeccCCCceeec---------ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCC
Q 014755 350 TRNDSMPTTLWIWDICRQEPAAIL---------VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGA 408 (419)
Q Consensus 350 ~~~~d~~~~i~iwd~~~~~~~~~~---------~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~ 408 (419)
+++. +.+++|++..+.+...+ .|...+.+++|+|||++|++++.||.|++|++.++
T Consensus 254 ~~~~---~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 254 AATA---TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp EEET---TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred EEcC---CCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 9886 56999999876654332 25678999999999999999999999999999764
No 21
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1e-44 Score=312.52 Aligned_cols=287 Identities=16% Similarity=0.320 Sum_probs=251.6
Q ss_pred EeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC
Q 014755 43 LFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN 122 (419)
Q Consensus 43 ~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~ 122 (419)
..+|.+.|.+++|+|++++|++++.| |.|++|++.+++....+..|...|.+++|+|++++|++++.++ .|++||+++
T Consensus 19 ~~gh~~~v~~~~~s~~~~~l~s~~~d-g~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~-~i~vwd~~~ 96 (312)
T 4ery_A 19 LAGHTKAVSSVKFSPNGEWLASSSAD-KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDK-TLKIWDVSS 96 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETT-SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS-EEEEEETTT
T ss_pred EcccCCcEEEEEECCCCCEEEEeeCC-CeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCC-EEEEEECCC
Confidence 34699999999999999999999977 8999999999999889999999999999999999999999988 999999999
Q ss_pred CeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCc
Q 014755 123 TACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEY 201 (419)
Q Consensus 123 ~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~ 201 (419)
++.+. +..|...+.+++|+|+++++++++.| +.|++||+++++.+..+..|...+.+++|+|+++++++ ++.++
T Consensus 97 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~d~ 171 (312)
T 4ery_A 97 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD---ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVS--SSYDG 171 (312)
T ss_dssp CCEEEEEECCSSCEEEEEECSSSSEEEEEETT---SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE--EETTS
T ss_pred CcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCC---CcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEE--EeCCC
Confidence 88877 88899999999999999999999987 89999999999999999999999999999999999988 66799
Q ss_pred eEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeec-ccccccCCCccceeccCC
Q 014755 202 KVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFM-HLSTVRGPCFPAVFKEVD 279 (419)
Q Consensus 202 ~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 279 (419)
.|++||+ +++.+..+... +...+..++|+|++++|++++.|+.|++||+.+++.+..+. |....
T Consensus 172 ~i~~wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~------------- 237 (312)
T 4ery_A 172 LCRIWDTASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEK------------- 237 (312)
T ss_dssp CEEEEETTTCCEEEEECCS-SCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSS-------------
T ss_pred cEEEEECCCCceeeEEecc-CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCce-------------
Confidence 9999999 77777666433 22379999999999999999999999999999988877765 22111
Q ss_pred CcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceE
Q 014755 280 EPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTL 359 (419)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i 359 (419)
..+......+++++|++|+.| +.|
T Consensus 238 ------------------------------------------------------~~~~~~~~~~~~~~l~sg~~d--g~i 261 (312)
T 4ery_A 238 ------------------------------------------------------YCIFANFSVTGGKWIVSGSED--NLV 261 (312)
T ss_dssp ------------------------------------------------------SCCCEEEECSSSCEEEECCTT--SCE
T ss_pred ------------------------------------------------------EEEEEEEEeCCCcEEEEECCC--CEE
Confidence 012222334688999999999 999
Q ss_pred EEeeccCCCceeec-ccCCCeeEEEeCCCCCeEEEEe--CCCcEEEeecC
Q 014755 360 WIWDICRQEPAAIL-VQKDPIRAATWDPTCTRLVLCT--GSSHLYMWTPS 406 (419)
Q Consensus 360 ~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~--~dg~i~vw~~~ 406 (419)
++||+.+++++..+ +|...|.+++|+|++++|++++ .|++|++|+.+
T Consensus 262 ~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 262 YIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred EEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 99999999988766 5999999999999999999987 69999999864
No 22
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=8.4e-45 Score=342.58 Aligned_cols=388 Identities=13% Similarity=0.149 Sum_probs=294.0
Q ss_pred cCeEEcCCCCEEEEEeCCeEEEEecCCC----cEEEEe-ecCcc-eeEEEEec--CCCeEEEEeccCCeEEEEEccCC--
Q 014755 11 GPSCFSPNARYIAVAVDYRLVVRDAHSF----KVVQLF-SCLDK-ISYIEWAL--DSEYILCGLYKRLMIQAWSLTQP-- 80 (419)
Q Consensus 11 ~~~~~s~d~~~la~~~~~~i~i~~~~~~----~~~~~~-~~~~~-v~~~~~s~--~~~~l~~~~~~~g~i~iw~~~~~-- 80 (419)
..++|+|||++||+++++.|.+||+.++ +....+ +|.+. |.+++|+| ++++|++++.| |.|++||+.++
T Consensus 22 ~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~d-g~v~vw~~~~~~~ 100 (615)
T 1pgu_A 22 THLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDES-GKVIVWGWTFDKE 100 (615)
T ss_dssp CCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETT-SEEEEEEEEEEGG
T ss_pred eEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCC-CEEEEEeCCCCcc
Confidence 3489999999999999999999999988 666555 59999 99999999 99999999976 89999999754
Q ss_pred ------cceeeeecCCccEeEEEECCCCCEEEEEecCC---CeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCC-EEEE
Q 014755 81 ------EWTCKIDEGLAGIAYARWSPDSRHILTTSDFQ---LRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGK-FAAI 149 (419)
Q Consensus 81 ------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~---~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~-~l~~ 149 (419)
+....+..|...|.+++|+|++++|++++.+. +.|.+|| .++... +..|...+.+++|+|+++ .+++
T Consensus 101 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 178 (615)
T 1pgu_A 101 SNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMT 178 (615)
T ss_dssp GTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEE
T ss_pred cccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEE
Confidence 56667788999999999999999999998762 3788888 444444 788999999999999998 7888
Q ss_pred EeecCCCCeEEEEeccCCeEEEEEecccc---ceeeeeECCC-CCeEEEEcCCCCceEEEEcC-CCceEEEE-e---ecC
Q 014755 150 CTRRDCKDYINLLSCHTWEIMGVFAVDTL---DLADIEWSPD-DSAIVIWDSPLEYKVLIYSP-DGRCLLKY-Q---AYE 220 (419)
Q Consensus 150 ~~~~~~~g~v~i~d~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~l~~~~~~~~~~i~~~d~-~~~~~~~~-~---~~~ 220 (419)
++.+ +.|++||+++++.+..+..|.. .|.+++|+|+ ++++++ ++.++.|++||+ +++.+..+ . .+.
T Consensus 179 ~~~d---~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~--~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 253 (615)
T 1pgu_A 179 VGDD---GSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVIT--VGSDRKISCFDGKSGEFLKYIEDDQEPVQ 253 (615)
T ss_dssp EETT---TEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEE--EETTCCEEEEETTTCCEEEECCBTTBCCC
T ss_pred EeCC---CcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEE--EeCCCeEEEEECCCCCEeEEecccccccC
Confidence 8876 8999999999999999999988 9999999999 999988 566899999999 78888777 3 444
Q ss_pred CCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeeccc-ccccCCCccceec------------------cCC--
Q 014755 221 SGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHL-STVRGPCFPAVFK------------------EVD-- 279 (419)
Q Consensus 221 ~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~~~~~~~~~~~~------------------~~~-- 279 (419)
. .|.+++|+ ++++|++++.|+.|++||+.+++.+..+... .........+.|. ...
T Consensus 254 ~--~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~ 330 (615)
T 1pgu_A 254 G--GIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDE 330 (615)
T ss_dssp S--CEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEE
T ss_pred C--ceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCc
Confidence 4 89999999 9999999999999999999999988887632 1111111111111 000
Q ss_pred -----CcccccceeeeccCc-------ccccccc-------------------------ccCCceEEEEEecc-------
Q 014755 280 -----EPLQLDMSELCLNDD-------FIQGNSD-------------------------ATNGHIKVRYEVME------- 315 (419)
Q Consensus 280 -----~~~~~~~~~~~~~~~-------~~~~~~~-------------------------~~~~~~~~~~~~~~------- 315 (419)
......+..+.+ .. +....+. .........|++..
T Consensus 331 ~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~ 409 (615)
T 1pgu_A 331 VLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQP 409 (615)
T ss_dssp EEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCE
T ss_pred EEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCc
Confidence 000011222222 10 0000000 00001111111100
Q ss_pred ---------------------------------------------------------CCCCCCCCC---CC-CCCCCCCc
Q 014755 316 ---------------------------------------------------------IPISLPFQK---PP-TDKPNPKQ 334 (419)
Q Consensus 316 ---------------------------------------------------------~~~~~~~~~---~~-~~~~~~~~ 334 (419)
....+.... .. ..+..|..
T Consensus 410 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~ 489 (615)
T 1pgu_A 410 KVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRA 489 (615)
T ss_dssp EEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSS
T ss_pred eEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccC
Confidence 000000000 00 44567899
Q ss_pred ceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec-c-cCCCeeEEEeCC----------CCCeEEEEeCCCcEEE
Q 014755 335 GIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL-V-QKDPIRAATWDP----------TCTRLVLCTGSSHLYM 402 (419)
Q Consensus 335 ~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~-~-~~~~v~~~~~s~----------~~~~l~s~~~dg~i~v 402 (419)
.|++++|+|++++|++++.| +.|++||+.+++++..+ + |...|++++|+| ++++|++++.||.|++
T Consensus 490 ~v~~~~~s~~g~~l~~~~~d--g~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~i 567 (615)
T 1pgu_A 490 KPSYISISPSETYIAAGDVM--GKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFI 567 (615)
T ss_dssp CEEEEEECTTSSEEEEEETT--SCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEE
T ss_pred ceEEEEECCCCCEEEEcCCC--CeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEE
Confidence 99999999999999999999 99999999999887766 4 999999999999 9999999999999999
Q ss_pred eecCCC-eEEe
Q 014755 403 WTPSGA-YCVS 412 (419)
Q Consensus 403 w~~~~~-~~~~ 412 (419)
|++.++ +++.
T Consensus 568 w~~~~~~~~~~ 578 (615)
T 1pgu_A 568 YSVKRPMKIIK 578 (615)
T ss_dssp EESSCTTCCEE
T ss_pred EECCCCceech
Confidence 999976 4444
No 23
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.3e-45 Score=319.06 Aligned_cols=280 Identities=14% Similarity=0.178 Sum_probs=246.7
Q ss_pred hcccccC---eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC
Q 014755 6 AYKQTGP---SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP 80 (419)
Q Consensus 6 ~~~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~ 80 (419)
..+|... ++|+||+++||+++ |++|++||..+++....+. |...|.+++|+|+|.+|++++.| +.+++|++...
T Consensus 60 l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d-~~i~v~~~~~~ 138 (354)
T 2pbi_B 60 LKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLD-NKCSVYPLTFD 138 (354)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTT-SEEEEEECCCC
T ss_pred ecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCC-CCEEEEEEecc
Confidence 3467665 79999999999999 8999999999888777554 78899999999999999999987 89999998654
Q ss_pred ------cceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEcc--CCCEEEEEe
Q 014755 81 ------EWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQ--DGKFAAICT 151 (419)
Q Consensus 81 ------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~--~~~~l~~~~ 151 (419)
.....+..|...|.+++|+|+++.|++++.|+ .|++||+++++.+. +..|...+.+++|+| ++++|++++
T Consensus 139 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~-~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs 217 (354)
T 2pbi_B 139 KNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDG-TCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGG 217 (354)
T ss_dssp TTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTS-EEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEE
T ss_pred ccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCC-cEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEe
Confidence 33456778999999999999999999999988 99999999998877 888999999999987 468999999
Q ss_pred ecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEE
Q 014755 152 RRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISW 230 (419)
Q Consensus 152 ~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~ 230 (419)
.| |.|++||+++++.+..+..|...|.+++|+|++..+++ ++.|+.|++||+ .++.+..+..+.....+.+++|
T Consensus 218 ~D---g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s--~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 292 (354)
T 2pbi_B 218 CD---KKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFAS--GSDDATCRLYDLRADREVAIYSKESIIFGASSVDF 292 (354)
T ss_dssp TT---SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE--EETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred CC---CeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEE--EeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEE
Confidence 87 89999999999999999999999999999999999998 677999999999 6666666655444447899999
Q ss_pred ccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEE
Q 014755 231 SPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVR 310 (419)
Q Consensus 231 s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (419)
+|++++|++++.|+.|++||+.+++.+..+.
T Consensus 293 s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~------------------------------------------------- 323 (354)
T 2pbi_B 293 SLSGRLLFAGYNDYTINVWDVLKGSRVSILF------------------------------------------------- 323 (354)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCSEEEEEC-------------------------------------------------
T ss_pred eCCCCEEEEEECCCcEEEEECCCCceEEEEE-------------------------------------------------
Confidence 9999999999999999999998887665542
Q ss_pred EEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEee
Q 014755 311 YEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWD 363 (419)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd 363 (419)
+|...|++++|+|||++|++|+.| ++|+||+
T Consensus 324 --------------------~h~~~v~~l~~spdg~~l~sgs~D--~~v~vW~ 354 (354)
T 2pbi_B 324 --------------------GHENRVSTLRVSPDGTAFCSGSWD--HTLRVWA 354 (354)
T ss_dssp --------------------CCSSCEEEEEECTTSSCEEEEETT--SEEEEEC
T ss_pred --------------------CCCCcEEEEEECCCCCEEEEEcCC--CCEEecC
Confidence 478889999999999999999999 9999996
No 24
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.2e-45 Score=372.65 Aligned_cols=394 Identities=16% Similarity=0.171 Sum_probs=295.3
Q ss_pred ccccC---eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcc
Q 014755 8 KQTGP---SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEW 82 (419)
Q Consensus 8 ~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~ 82 (419)
+|... ++|||||++||+++ ++.|++||+.+++.+..+. |.+.|.+++|+|++++|++++.| |.|++||+.+++.
T Consensus 613 ~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-~~v~vwd~~~~~~ 691 (1249)
T 3sfz_A 613 PHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSAD-KKVKIWDSATGKL 691 (1249)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT-SEEEEEETTTCCE
T ss_pred cccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCC-CeEEEEECCCCce
Confidence 55555 79999999999998 8899999999999887665 99999999999999999999976 8999999999999
Q ss_pred eeeeecCCccEeEEEECC--CCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeE
Q 014755 83 TCKIDEGLAGIAYARWSP--DSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYI 159 (419)
Q Consensus 83 ~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v 159 (419)
+..+..|...|.+++|+| ++..+++++.++ .|++||+++++... +..|...+.+++|+|+++++++++.| |.|
T Consensus 692 ~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~-~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~d---g~v 767 (1249)
T 3sfz_A 692 VHTYDEHSEQVNCCHFTNKSNHLLLATGSNDF-FLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSAD---GTL 767 (1249)
T ss_dssp EEEEECCSSCEEEEEECSSSSCCEEEEEETTS-CEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESS---SEE
T ss_pred EEEEcCCCCcEEEEEEecCCCceEEEEEeCCC-eEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECC---CeE
Confidence 999999999999999999 555788888887 99999999998877 88899999999999999999999987 899
Q ss_pred EEEeccCCeEEEEEe-------------------------------------------------------ccccceeeee
Q 014755 160 NLLSCHTWEIMGVFA-------------------------------------------------------VDTLDLADIE 184 (419)
Q Consensus 160 ~i~d~~~~~~~~~~~-------------------------------------------------------~~~~~v~~~~ 184 (419)
++||+++++....+. .|...+.+++
T Consensus 768 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~ 847 (1249)
T 3sfz_A 768 RLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCD 847 (1249)
T ss_dssp EEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEE
T ss_pred EEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEE
Confidence 999998776544332 4556788889
Q ss_pred ECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeec--
Q 014755 185 WSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFM-- 261 (419)
Q Consensus 185 ~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-- 261 (419)
|+|+++.+++ +..++.|++||. ++..+..+..|.. .|.+++|+|+++++++++.|+.|++|++.+......+.
T Consensus 848 ~sp~~~~l~~--~~~dg~v~vwd~~~~~~~~~~~~h~~--~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~ 923 (1249)
T 3sfz_A 848 FSPYDHLAVI--ALSQYCVELWNIDSRLKVADCRGHLS--WVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLK 923 (1249)
T ss_dssp ECSSTTEEEE--ECSSSCEEEEETTTTEEEEEECCCSS--CEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEE
T ss_pred EcCCCCEEEE--EeCCCeEEEEEcCCCceeeecCCCcc--ceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeeccc
Confidence 9999998888 667899999999 7788888877666 89999999999999999999999999975421100000
Q ss_pred ----------------------------ccccc----cCCCccceeccCCC--------------------------ccc
Q 014755 262 ----------------------------HLSTV----RGPCFPAVFKEVDE--------------------------PLQ 283 (419)
Q Consensus 262 ----------------------------~~~~~----~~~~~~~~~~~~~~--------------------------~~~ 283 (419)
..... ..+...+.|++.+. ...
T Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~ 1003 (1249)
T 3sfz_A 924 QEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHK 1003 (1249)
T ss_dssp EEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCS
T ss_pred ceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCC
Confidence 00000 00000011111000 000
Q ss_pred ccceeeeccCccccccccccCCceEEEEEeccC------------------------------C---CCCCCCCCCCCCC
Q 014755 284 LDMSELCLNDDFIQGNSDATNGHIKVRYEVMEI------------------------------P---ISLPFQKPPTDKP 330 (419)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~---~~~~~~~~~~~~~ 330 (419)
..+..+.+..++........+ .....|++... . ......+....+.
T Consensus 1004 ~~v~~l~~s~dg~~l~s~~~d-g~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 1082 (1249)
T 3sfz_A 1004 KAVRHIQFTADGKTLISSSED-SVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFT 1082 (1249)
T ss_dssp SCCCCEEECSSSSCEEEECSS-SBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEE
T ss_pred CceEEEEECCCCCEEEEEcCC-CEEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEc
Confidence 111222222221111111111 11111111100 0 0011223344456
Q ss_pred CCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec-ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCe
Q 014755 331 NPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL-VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAY 409 (419)
Q Consensus 331 ~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~ 409 (419)
+|...|.+++|+|+++++++++.| +.|++||+.++++...+ +|...|++++|+|++++|++++.||.|++||+.+++
T Consensus 1083 ~~~~~v~~~~~s~d~~~l~s~s~d--~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~ 1160 (1249)
T 3sfz_A 1083 CHQGTVLSCAISSDATKFSSTSAD--KTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQ 1160 (1249)
T ss_dssp CCSSCCCCEEECSSSSSCEEECCS--SCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSC
T ss_pred ccCCcEEEEEECCCCCEEEEEcCC--CcEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence 788999999999999999999999 99999999998877666 599999999999999999999999999999999887
Q ss_pred EEec
Q 014755 410 CVSN 413 (419)
Q Consensus 410 ~~~~ 413 (419)
.+..
T Consensus 1161 ~~~~ 1164 (1249)
T 3sfz_A 1161 LLHS 1164 (1249)
T ss_dssp CCCC
T ss_pred eEEE
Confidence 6654
No 25
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=7.1e-46 Score=322.07 Aligned_cols=280 Identities=14% Similarity=0.131 Sum_probs=229.1
Q ss_pred ccccCeEEcCCCCEEEEEeCCeEEEEecC------------CCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEE
Q 014755 8 KQTGPSCFSPNARYIAVAVDYRLVVRDAH------------SFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAW 75 (419)
Q Consensus 8 ~~~~~~~~s~d~~~la~~~~~~i~i~~~~------------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw 75 (419)
++...++|||||++|++++++++++||.. .+.......+...|.+++|+|++ .|++++.| |+|+||
T Consensus 31 ~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~d-g~v~lW 108 (344)
T 4gqb_B 31 RQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDS-GAVELW 108 (344)
T ss_dssp SEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETT-SEEEEE
T ss_pred CCEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECC-CEEEEE
Confidence 34455899999999999998888877632 11223345577889999999986 67788766 899999
Q ss_pred EccCCcceee----eecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCC-EEEE
Q 014755 76 SLTQPEWTCK----IDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGK-FAAI 149 (419)
Q Consensus 76 ~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~-~l~~ 149 (419)
|+++++.... ..+|...|.+++|+|++++|++++.|+ .|++||+++++.+. +..|...|.+++|+|++. +|++
T Consensus 109 d~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~-~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s 187 (344)
T 4gqb_B 109 ELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDI-CIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLS 187 (344)
T ss_dssp EECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS-CEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEE
T ss_pred eccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCC-eEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceee
Confidence 9999876543 347999999999999999999999988 99999999999888 888999999999999985 6788
Q ss_pred EeecCCCCeEEEEeccCCeEEEEEe--ccccceeeeeECCCCC-eEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCce
Q 014755 150 CTRRDCKDYINLLSCHTWEIMGVFA--VDTLDLADIEWSPDDS-AIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGV 225 (419)
Q Consensus 150 ~~~~~~~g~v~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~-~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v 225 (419)
++.| +.|++||+++++....+. .+...+.+++|+|++. ++++ ++.|+.|++||+ +++++..+..|.. .|
T Consensus 188 ~s~D---~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~s--g~~dg~v~~wd~~~~~~~~~~~~h~~--~v 260 (344)
T 4gqb_B 188 CSED---NRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVF--GDENGTVSLVDTKSTSCVLSSAVHSQ--CV 260 (344)
T ss_dssp EETT---SCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEE--EETTSEEEEEESCC--CCEEEECCSS--CE
T ss_pred eccc---cccccccccccceeeeeecceeeccceeeeecCCCCcceEE--eccCCcEEEEECCCCcEEEEEcCCCC--CE
Confidence 8876 899999999998877764 3455789999999654 5555 567999999999 8888999988776 89
Q ss_pred eEEEEccCC-CeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccC
Q 014755 226 KSISWSPCG-QFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATN 304 (419)
Q Consensus 226 ~~~~~s~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (419)
++++|+|++ ++|++++.|++|+|||+.+++++..
T Consensus 261 ~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~--------------------------------------------- 295 (344)
T 4gqb_B 261 TGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRS--------------------------------------------- 295 (344)
T ss_dssp EEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEE---------------------------------------------
T ss_pred EEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEE---------------------------------------------
Confidence 999999998 5799999999999999988765432
Q ss_pred CceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCe-EEEEecCCCCceEEEeeccCCCc
Q 014755 305 GHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQ-YICTRNDSMPTTLWIWDICRQEP 369 (419)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~d~~~~i~iwd~~~~~~ 369 (419)
.+|.+.|++++|+|+++ +|++++.| ++|++|++.+..+
T Consensus 296 -------------------------~~H~~~V~~v~~sp~~~~llas~s~D--~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 296 -------------------------QAHRDFVRDATWSPLNHSLLTTVGWD--HQVVHHVVPTEPL 334 (344)
T ss_dssp -------------------------CCCSSCEEEEEECSSSTTEEEEEETT--SCEEEEECCC---
T ss_pred -------------------------cCCCCCEEEEEEeCCCCeEEEEEcCC--CeEEEEECCCCCC
Confidence 14888899999999986 56789998 9999999987543
No 26
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=7.7e-45 Score=322.96 Aligned_cols=314 Identities=13% Similarity=0.220 Sum_probs=250.9
Q ss_pred eCCeEEEEecCCCc-----EEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCc---------
Q 014755 26 VDYRLVVRDAHSFK-----VVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLA--------- 91 (419)
Q Consensus 26 ~~~~i~i~~~~~~~-----~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~--------- 91 (419)
.+....+|+....+ +.+.+.|.+.|.+++|+|||++|++++ + +.+++|++.+++.+..+..+..
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fspdg~~la~g~-~-~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~ 115 (393)
T 1erj_A 38 TNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-N-KTTQVYRVSDGSLVARLSDDSAANKDPENLN 115 (393)
T ss_dssp CSSCEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEEEEEC-B-SCEEEEETTTCCEEEEECC------------
T ss_pred CCceEEEECCCCCcccCceeEEecCCCCEEEEEEECCCCCEEEEEc-C-CcEEEEEecCCCEEEEecCcccccccccccc
Confidence 34445577655433 334567999999999999999999987 5 6899999999988777655432
Q ss_pred ---------cEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEE
Q 014755 92 ---------GIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINL 161 (419)
Q Consensus 92 ---------~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i 161 (419)
.|.+++|+|++++|++++.|+ .|++||+++++... +..|...+.+++|+|++++|++++.| +.|++
T Consensus 116 ~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~-~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d---~~v~i 191 (393)
T 1erj_A 116 TSSSPSSDLYIRSVCFSPDGKFLATGAEDR-LIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGD---RTVRI 191 (393)
T ss_dssp -----CCCCBEEEEEECTTSSEEEEEETTS-CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEE
T ss_pred ccccCCCceeEEEEEECCCCCEEEEEcCCC-eEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCC---CcEEE
Confidence 389999999999999999988 99999999998877 88899999999999999999999987 89999
Q ss_pred EeccCCeEEEEEeccccceeeeeECC-CCCeEEEEcCCCCceEEEEcC-CCceEEEEee-----cCCCCceeEEEEccCC
Q 014755 162 LSCHTWEIMGVFAVDTLDLADIEWSP-DDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQA-----YESGLGVKSISWSPCG 234 (419)
Q Consensus 162 ~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~-----~~~~~~v~~~~~s~~~ 234 (419)
||+++++....+. +...+.+++|+| +++++++ ++.|+.|++||+ ++..+..+.. ..+...|.+++|+|++
T Consensus 192 wd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~--~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g 268 (393)
T 1erj_A 192 WDLRTGQCSLTLS-IEDGVTTVAVSPGDGKYIAA--GSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDG 268 (393)
T ss_dssp EETTTTEEEEEEE-CSSCEEEEEECSTTCCEEEE--EETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTS
T ss_pred EECCCCeeEEEEE-cCCCcEEEEEECCCCCEEEE--EcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCC
Confidence 9999998877766 456799999999 8888888 667999999999 7777766621 2233489999999999
Q ss_pred CeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEec
Q 014755 235 QFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVM 314 (419)
Q Consensus 235 ~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (419)
++|++++.|++|++||+.+............ +...
T Consensus 269 ~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~---------------------------------------~~~~------ 303 (393)
T 1erj_A 269 QSVVSGSLDRSVKLWNLQNANNKSDSKTPNS---------------------------------------GTCE------ 303 (393)
T ss_dssp SEEEEEETTSEEEEEEC------------------------------------------------------CEE------
T ss_pred CEEEEEeCCCEEEEEECCCCCCcccccCCCC---------------------------------------Ccce------
Confidence 9999999999999999876543222110000 0000
Q ss_pred cCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec-ccCCCeeEEEeCC------C
Q 014755 315 EIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL-VQKDPIRAATWDP------T 387 (419)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~------~ 387 (419)
..+.+|...|.+++|+|++++|++++.| +.|++||+.+++++..+ +|...|.+++|++ +
T Consensus 304 ------------~~~~~h~~~v~~~~~~~~~~~l~sgs~D--~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~ 369 (393)
T 1erj_A 304 ------------VTYIGHKDFVLSVATTQNDEYILSGSKD--RGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPE 369 (393)
T ss_dssp ------------EEEECCSSCEEEEEECGGGCEEEEEETT--SEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTT
T ss_pred ------------EEEecccCcEEEEEECCCCCEEEEEeCC--CeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCC
Confidence 0012588889999999999999999999 99999999999887666 5999999999876 6
Q ss_pred CCeEEEEeCCCcEEEeecCC
Q 014755 388 CTRLVLCTGSSHLYMWTPSG 407 (419)
Q Consensus 388 ~~~l~s~~~dg~i~vw~~~~ 407 (419)
+++|++++.||+|++|++..
T Consensus 370 ~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 370 YNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp CEEEEEEETTSEEEEEEEEE
T ss_pred CCEEEEECCCCcEEECcccc
Confidence 88999999999999999864
No 27
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=8.9e-45 Score=316.76 Aligned_cols=284 Identities=15% Similarity=0.165 Sum_probs=237.8
Q ss_pred EeecCcceeEEEE-----ec-CCCeEEEEeccCCeEEEEEccCC-------cceeeeecCCccEeEEEECCCCCEEEEEe
Q 014755 43 LFSCLDKISYIEW-----AL-DSEYILCGLYKRLMIQAWSLTQP-------EWTCKIDEGLAGIAYARWSPDSRHILTTS 109 (419)
Q Consensus 43 ~~~~~~~v~~~~~-----s~-~~~~l~~~~~~~g~i~iw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 109 (419)
+.+|.+.|++++| ++ ++++|++++.| ++|++||+.+. .....+.+|...|.+++|+|++.++++++
T Consensus 17 l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D-~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s 95 (343)
T 2xzm_R 17 LEGHSDWVTSIVAGFSQKENEDSPVLISGSRD-KTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSS 95 (343)
T ss_dssp EECCSSCEEEEEECCCSSTTCCCCEEEEEETT-SCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEE
T ss_pred eccchhhhhheeeEEEeecCCCCCEEEEEcCC-CEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEc
Confidence 3469999999999 77 99999999977 89999999754 34556788999999999999999999999
Q ss_pred cCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEe---ccccceeeeeE
Q 014755 110 DFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFA---VDTLDLADIEW 185 (419)
Q Consensus 110 ~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~---~~~~~v~~~~~ 185 (419)
.|+ .|++||+++++... +..|...+.+++|+|++++|++++.| +.|++||+.... ..... .|...+.+++|
T Consensus 96 ~D~-~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d---~~i~~wd~~~~~-~~~~~~~~~~~~~v~~~~~ 170 (343)
T 2xzm_R 96 WDK-TLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAE---REIKLWNILGEC-KFSSAEKENHSDWVSCVRY 170 (343)
T ss_dssp TTS-EEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETT---SCEEEEESSSCE-EEECCTTTSCSSCEEEEEE
T ss_pred CCC-cEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCC---CEEEEEeccCCc-eeeeecccCCCceeeeeee
Confidence 988 99999999988877 88899999999999999999999987 899999998433 33332 57788999999
Q ss_pred CCCC----------CeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCc-
Q 014755 186 SPDD----------SAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTW- 254 (419)
Q Consensus 186 ~~~~----------~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~- 254 (419)
+|++ .++++ ++.|+.|++||..++....+..|.. .|.+++|+|+|++|++++.|+.|++||+...
T Consensus 171 ~~~~~~~~~~~~~~~~l~s--~~~d~~i~iwd~~~~~~~~~~~h~~--~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~ 246 (343)
T 2xzm_R 171 SPIMKSANKVQPFAPYFAS--VGWDGRLKVWNTNFQIRYTFKAHES--NVNHLSISPNGKYIATGGKDKKLLIWDILNLT 246 (343)
T ss_dssp CCCCCSCSCCCSSCCEEEE--EETTSEEEEEETTTEEEEEEECCSS--CEEEEEECTTSSEEEEEETTCEEEEEESSCCS
T ss_pred ccccccccccCCCCCEEEE--EcCCCEEEEEcCCCceeEEEcCccc--cceEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 9987 56777 6679999999987777777777665 8999999999999999999999999998432
Q ss_pred eeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCc
Q 014755 255 KTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQ 334 (419)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (419)
.....+. +..
T Consensus 247 ~~~~~~~----------------------------------------------------------------------~~~ 256 (343)
T 2xzm_R 247 YPQREFD----------------------------------------------------------------------AGS 256 (343)
T ss_dssp SCSEEEE----------------------------------------------------------------------CSS
T ss_pred ccceeec----------------------------------------------------------------------CCC
Confidence 2222111 233
Q ss_pred ceEEEEEccCCeEEEEecCCCCceEEEeeccCCCcee--ec------------ccCCCeeEEEeCCCCCeEEEEeCCCcE
Q 014755 335 GIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAA--IL------------VQKDPIRAATWDPTCTRLVLCTGSSHL 400 (419)
Q Consensus 335 ~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~--~~------------~~~~~v~~~~~s~~~~~l~s~~~dg~i 400 (419)
.|.+++|+|++++++++. | +.|++||+.+++... .+ +|...|++++|+|+|++|++|+.||.|
T Consensus 257 ~v~~v~~sp~~~~la~~~-d--~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v 333 (343)
T 2xzm_R 257 TINQIAFNPKLQWVAVGT-D--QGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVI 333 (343)
T ss_dssp CEEEEEECSSSCEEEEEE-S--SCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEE
T ss_pred cEEEEEECCCCCEEEEEC-C--CCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceE
Confidence 489999999999887665 4 789999998866432 11 477889999999999999999999999
Q ss_pred EEeecCCCe
Q 014755 401 YMWTPSGAY 409 (419)
Q Consensus 401 ~vw~~~~~~ 409 (419)
++|++++++
T Consensus 334 ~~w~~~~g~ 342 (343)
T 2xzm_R 334 RTFSFETSA 342 (343)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEccC
Confidence 999987653
No 28
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.2e-45 Score=330.35 Aligned_cols=317 Identities=11% Similarity=0.098 Sum_probs=266.2
Q ss_pred CeEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCC
Q 014755 12 PSCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGL 90 (419)
Q Consensus 12 ~~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~ 90 (419)
.++|+|+|++|++++ ++.|++||+.+++....+.....+....|+|++++|++++.+ |.|++||+.+++....+..|.
T Consensus 61 ~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-g~i~iwd~~~~~~~~~~~~h~ 139 (420)
T 3vl1_A 61 GNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTE-GDIKVLDSNFNLQREIDQAHV 139 (420)
T ss_dssp TCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETT-SCEEEECTTSCEEEEETTSSS
T ss_pred ceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECC-CCEEEEeCCCcceeeeccccc
Confidence 589999999999998 899999999887765555444556666889999999999976 899999999998887778999
Q ss_pred ccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeE
Q 014755 91 AGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEI 169 (419)
Q Consensus 91 ~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~ 169 (419)
..|.+++|+|++++|++++.++ .|++||+++++... +..|...+.+++|+|++++|++++.| +.|++||+++++.
T Consensus 140 ~~v~~~~~~~~~~~l~s~s~d~-~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---~~v~iwd~~~~~~ 215 (420)
T 3vl1_A 140 SEITKLKFFPSGEALISSSQDM-QLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLD---GTIRLWECGTGTT 215 (420)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-EEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETT---SCEEEEETTTTEE
T ss_pred CccEEEEECCCCCEEEEEeCCC-eEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCC---CcEEEeECCCCce
Confidence 9999999999999999999988 99999999887766 78899999999999999999999987 8999999999999
Q ss_pred EEEEecc------------------------ccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCc
Q 014755 170 MGVFAVD------------------------TLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLG 224 (419)
Q Consensus 170 ~~~~~~~------------------------~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~ 224 (419)
+..+..+ ...+.+++|+|+++++++ +..++.|++||+ +++.+..+.. .+...
T Consensus 216 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~--~~~dg~i~i~d~~~~~~~~~~~~-~~~~~ 292 (420)
T 3vl1_A 216 IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIA--GHVSGVITVHNVFSKEQTIQLPS-KFTCS 292 (420)
T ss_dssp EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEE--EETTSCEEEEETTTCCEEEEECC-TTSSC
T ss_pred eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEE--EcCCCeEEEEECCCCceeEEccc-ccCCC
Confidence 8888753 245666778999999988 667999999999 6766666643 23348
Q ss_pred eeEEEEccCCC-eEEEEEecCcEEEEEcCCcee-eeeecccccccCCCccceeccCCCcccccceeeeccCccccccccc
Q 014755 225 VKSISWSPCGQ-FLAVGSYDQTLRVLNHLTWKT-FAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDA 302 (419)
Q Consensus 225 v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (419)
+.+++|+|+++ +|++++.||.|++||+++++. +..+..
T Consensus 293 v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~---------------------------------------- 332 (420)
T 3vl1_A 293 CNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLI---------------------------------------- 332 (420)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEE----------------------------------------
T ss_pred ceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhc----------------------------------------
Confidence 99999999998 999999999999999988643 333320
Q ss_pred cCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCC----------Cceee
Q 014755 303 TNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQ----------EPAAI 372 (419)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~----------~~~~~ 372 (419)
.|...|.++. ++++++|++++.| +.|++|++... .....
T Consensus 333 ----------------------------~~~~~v~~~~-~~~~~~l~s~~~d--~~v~iw~~~~~~~~~~~~~~~~~~~~ 381 (420)
T 3vl1_A 333 ----------------------------NEGTPINNVY-FAAGALFVSSGFD--TSIKLDIISDPESERPAIEFETPTFL 381 (420)
T ss_dssp ----------------------------STTSCEEEEE-EETTEEEEEETTT--EEEEEEEECCTTCCSCEECTTSCEEE
T ss_pred ----------------------------cCCCCceEEE-eCCCCEEEEecCC--ccEEEEeccCCCCCccceeccCccEE
Confidence 1445577774 4688999999999 99999999873 22234
Q ss_pred cccCCCeeEEEeCCCCC---eEEEEeCCCcEEEeecCC
Q 014755 373 LVQKDPIRAATWDPTCT---RLVLCTGSSHLYMWTPSG 407 (419)
Q Consensus 373 ~~~~~~v~~~~~s~~~~---~l~s~~~dg~i~vw~~~~ 407 (419)
..|...|.+++|+|+++ .|++++.+|.+.+|+++.
T Consensus 382 ~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 382 VSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp CCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred ccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 46889999999999999 788888899999999874
No 29
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.8e-44 Score=308.10 Aligned_cols=245 Identities=15% Similarity=0.181 Sum_probs=216.9
Q ss_pred ccccC---eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcc
Q 014755 8 KQTGP---SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEW 82 (419)
Q Consensus 8 ~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~ 82 (419)
+|... ++|+|++++|++++ |+.|++||+++++.+..+. |..+|.+++|+|++++|++++.| ++|++||+.+++.
T Consensus 11 ~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d-~~i~vwd~~~~~~ 89 (304)
T 2ynn_A 11 NRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD-FRIRVFNYNTGEK 89 (304)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT-SEEEEEETTTCCE
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCC-CEEEEEECCCCcE
Confidence 45544 89999999999998 8999999999998887665 88899999999999999999976 8999999999999
Q ss_pred eeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCe-EEE-eccCCCCeeeEEEcc-CCCEEEEEeecCCCCeE
Q 014755 83 TCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTA-CVH-VQSPKHASKGVAFTQ-DGKFAAICTRRDCKDYI 159 (419)
Q Consensus 83 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~-~~~-~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~g~v 159 (419)
+..+..|...|.+++|+|++++|++++.|+ .|++||++++. ... +..|...+.+++|+| ++..|++++.| +.|
T Consensus 90 ~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~-~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D---~~v 165 (304)
T 2ynn_A 90 VVDFEAHPDYIRSIAVHPTKPYVLSGSDDL-TVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD---RTV 165 (304)
T ss_dssp EEEEECCSSCEEEEEECSSSSEEEEEETTS-CEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETT---SEE
T ss_pred EEEEeCCCCcEEEEEEcCCCCEEEEECCCC-eEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCC---CeE
Confidence 999999999999999999999999999988 99999999874 333 788999999999999 57899999987 899
Q ss_pred EEEeccCCeEEEEEe-ccccceeeeeECC--CCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCC
Q 014755 160 NLLSCHTWEIMGVFA-VDTLDLADIEWSP--DDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQ 235 (419)
Q Consensus 160 ~i~d~~~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~ 235 (419)
++||++++.....+. .+...+..+.|+| +++++++ ++.|+.|++||+ +++++..+..|.. .|.+++|+|+++
T Consensus 166 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s--~s~D~~i~iWd~~~~~~~~~~~~h~~--~v~~~~~~p~~~ 241 (304)
T 2ynn_A 166 KVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMIT--ASDDLTIKIWDYQTKSCVATLEGHMS--NVSFAVFHPTLP 241 (304)
T ss_dssp EEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEE--EETTSEEEEEETTTTEEEEEEECCSS--CEEEEEECSSSS
T ss_pred EEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEE--EcCCCeEEEEeCCCCccceeeCCCCC--CEEEEEECCCCC
Confidence 999998876655554 4557788899887 6778887 677999999999 8888888888776 899999999999
Q ss_pred eEEEEEecCcEEEEEcCCceeeeeec
Q 014755 236 FLAVGSYDQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 236 ~l~~~~~d~~i~v~d~~~~~~~~~~~ 261 (419)
+|++++.|++|++||+.+++.++.+.
T Consensus 242 ~l~s~s~Dg~i~iWd~~~~~~~~~~~ 267 (304)
T 2ynn_A 242 IIISGSEDGTLKIWNSSTYKVEKTLN 267 (304)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred EEEEEcCCCeEEEEECCCCceeeecc
Confidence 99999999999999999988877764
No 30
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.2e-44 Score=345.18 Aligned_cols=390 Identities=10% Similarity=0.059 Sum_probs=277.9
Q ss_pred hcccccC---eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCc
Q 014755 6 AYKQTGP---SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPE 81 (419)
Q Consensus 6 ~~~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~ 81 (419)
.++|... ++|+|++++||+|+ |+.|+||+..+.+......|..+|.+++|+| |++|++++.| ++|++||+.+++
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D-~~v~lWd~~~~~ 90 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAK-DTVYVLSLYSQK 90 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETT-CEEEEEETTTCS
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECc-CeEEEEECCCCc
Confidence 3466554 89999999999998 8999999999888877778889999999999 8899999876 899999999998
Q ss_pred ceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE------------eccCCCCeeeEEEccCC-CEEE
Q 014755 82 WTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH------------VQSPKHASKGVAFTQDG-KFAA 148 (419)
Q Consensus 82 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~------------~~~~~~~~~~~~~~~~~-~~l~ 148 (419)
.+..+. |...|++++|+|+++++++++.++ .|++||+++++... ...|...|.+++|+|++ ..++
T Consensus 91 ~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg-~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~ 168 (902)
T 2oaj_A 91 VLTTVF-VPGKITSIDTDASLDWMLIGLQNG-SMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVL 168 (902)
T ss_dssp EEEEEE-CSSCEEEEECCTTCSEEEEEETTS-CEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEE
T ss_pred EEEEEc-CCCCEEEEEECCCCCEEEEEcCCC-cEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEE
Confidence 887775 678899999999999999999988 99999999987642 24577889999999964 6788
Q ss_pred EEeecCCCCeEEEEeccCCeEEEEEecc------------------ccceeeeeECCCCCeEEEEcCCCCceEEEEcC-C
Q 014755 149 ICTRRDCKDYINLLSCHTWEIMGVFAVD------------------TLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-D 209 (419)
Q Consensus 149 ~~~~~~~~g~v~i~d~~~~~~~~~~~~~------------------~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~ 209 (419)
+++.+ |.| +||+++++.+..+..| ...|.+++|+|+|+++++ ++.|+.|++||+ +
T Consensus 169 ~g~~d---g~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~las--gs~Dg~i~lWd~~~ 242 (902)
T 2oaj_A 169 ISYEY---VTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIIT--IHEDNSLVFWDANS 242 (902)
T ss_dssp EECSS---CEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEE--EETTCCEEEEETTT
T ss_pred EEeCC---CcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEE--EECCCeEEEEECCC
Confidence 87776 899 9999999988887755 467999999999999998 677999999999 7
Q ss_pred CceEEEEee-----c-----------CCCCceeEEEEc----cCC-CeEEEEEec-----CcEEEEEcC-----------
Q 014755 210 GRCLLKYQA-----Y-----------ESGLGVKSISWS----PCG-QFLAVGSYD-----QTLRVLNHL----------- 252 (419)
Q Consensus 210 ~~~~~~~~~-----~-----------~~~~~v~~~~~s----~~~-~~l~~~~~d-----~~i~v~d~~----------- 252 (419)
++++..... + .+...|.+++|+ |++ .+|++|+.+ ..+++|++.
T Consensus 243 g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~ 322 (902)
T 2oaj_A 243 GHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYE 322 (902)
T ss_dssp CCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHH
T ss_pred CcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchh
Confidence 776654221 2 123379999995 443 567777665 378899842
Q ss_pred -------Cceeeeeec--cccccc----------------CC---------CccceeccC-CCccc-------------c
Q 014755 253 -------TWKTFAEFM--HLSTVR----------------GP---------CFPAVFKEV-DEPLQ-------------L 284 (419)
Q Consensus 253 -------~~~~~~~~~--~~~~~~----------------~~---------~~~~~~~~~-~~~~~-------------~ 284 (419)
+.+..+.+. +...+. .+ .....|... +.+.. .
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~ 402 (902)
T 2oaj_A 323 GMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRP 402 (902)
T ss_dssp HHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTT
T ss_pred hhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCC
Confidence 111111111 111000 00 001111100 00000 0
Q ss_pred cceeeecc----------------------------------CccccccccccCCceEEEEEeccCCCCCCCCCCCC---
Q 014755 285 DMSELCLN----------------------------------DDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPT--- 327 (419)
Q Consensus 285 ~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 327 (419)
.+..+++. ... ..............|++..... ...+...
T Consensus 403 ~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg-~~laSgs~DgtVrlWd~~~g~~--~~~~~~~~~l 479 (902)
T 2oaj_A 403 LATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYG-TAFITGHSNGSVRIYDASHGDI--QDNASFEVNL 479 (902)
T ss_dssp BEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEE-EEEEEEETTSEEEEEESSCCTT--TTTBCEEEEH
T ss_pred CeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccC-cEEEEecCCCcEEEEECCCccc--cCCceEEeec
Confidence 01111110 000 0011111223445555543311 0000000
Q ss_pred ---CCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCC------------------------------------
Q 014755 328 ---DKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQE------------------------------------ 368 (419)
Q Consensus 328 ---~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~------------------------------------ 368 (419)
...+|...|.+++|||||++||+|+.| |+|+|||+.+++
T Consensus 480 ~~~~~~~h~~~V~svafspdg~~LAsgs~D--gtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (902)
T 2oaj_A 480 SRTLNKAKELAVDKISFAAETLELAVSIET--GDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRA 557 (902)
T ss_dssp HHHTTCSSSCCEEEEEEETTTTEEEEEETT--SCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGC
T ss_pred hhhcCCCCCCceeEEEecCCCCeEEEEecC--cEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccC
Confidence 012788899999999999999999999 999999998763
Q ss_pred ---------ceeec-ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEE
Q 014755 369 ---------PAAIL-VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCV 411 (419)
Q Consensus 369 ---------~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~ 411 (419)
++..+ +|.+.|++++||||| +||+|+.|++|+|||+++..++
T Consensus 558 ~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~ 609 (902)
T 2oaj_A 558 PTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAII 609 (902)
T ss_dssp CTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEE
T ss_pred CCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEE
Confidence 13333 599999999999999 9999999999999999987765
No 31
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.1e-44 Score=308.49 Aligned_cols=288 Identities=12% Similarity=0.179 Sum_probs=244.1
Q ss_pred hcccccC---eEEcCCC-CEEEEEe-CCeEEEEecCCC-----cEEE-EeecCcceeEEEEecCCCeEEEEeccCCeEEE
Q 014755 6 AYKQTGP---SCFSPNA-RYIAVAV-DYRLVVRDAHSF-----KVVQ-LFSCLDKISYIEWALDSEYILCGLYKRLMIQA 74 (419)
Q Consensus 6 ~~~~~~~---~~~s~d~-~~la~~~-~~~i~i~~~~~~-----~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~i 74 (419)
..+|.+. ++|+|++ ++|++++ |++|++|++.+. ..+. ..+|...|.+++|+|++++|++++.| ++|++
T Consensus 13 l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D-~~v~~ 91 (319)
T 3frx_A 13 LEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWD-KTLRL 91 (319)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETT-SEEEE
T ss_pred EccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCC-CEEEE
Confidence 4577766 7899965 8999998 899999998642 2333 34599999999999999999999987 89999
Q ss_pred EEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCC------CEEE
Q 014755 75 WSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDG------KFAA 148 (419)
Q Consensus 75 w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~------~~l~ 148 (419)
||+.+++....+.+|...|.+++|+|+++++++++.|+ .|++||++......+..|...+.++.++|.. ..++
T Consensus 92 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~-~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~ 170 (319)
T 3frx_A 92 WDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDK-TIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTII 170 (319)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTS-CEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEE
T ss_pred EECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEE
Confidence 99999999999999999999999999999999999998 9999999876666688899999999999854 4788
Q ss_pred EEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeE
Q 014755 149 ICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKS 227 (419)
Q Consensus 149 ~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~ 227 (419)
+++.| +.|++||+++.+....+.+|...|.+++|+|+++++++ ++.|+.|++||+ +++.+..+..+. .+.+
T Consensus 171 s~~~d---~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s--~~~dg~i~iwd~~~~~~~~~~~~~~---~v~~ 242 (319)
T 3frx_A 171 SAGND---KMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIAS--AGKDGEIMLWNLAAKKAMYTLSAQD---EVFS 242 (319)
T ss_dssp EEETT---SCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEE--EETTCEEEEEETTTTEEEEEEECCS---CEEE
T ss_pred EEeCC---CEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEE--EeCCCeEEEEECCCCcEEEEecCCC---cEEE
Confidence 88887 89999999999999999999999999999999999998 677999999999 777777776543 6999
Q ss_pred EEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCce
Q 014755 228 ISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHI 307 (419)
Q Consensus 228 ~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (419)
++|+|++.+|++++.+ .+++|++..+..+..+...... +
T Consensus 243 ~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~--------~-------------------------------- 281 (319)
T 3frx_A 243 LAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAG--------Y-------------------------------- 281 (319)
T ss_dssp EEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTT--------C--------------------------------
T ss_pred EEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccc--------c--------------------------------
Confidence 9999999999887754 6999999887766655411000 0
Q ss_pred EEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCC
Q 014755 308 KVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQ 367 (419)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~ 367 (419)
...|...+.+++|+|||++|++|+.| +.|+|||+.++
T Consensus 282 ---------------------~~~~~~~v~~~~~spdg~~l~sg~~D--g~i~vWd~~t~ 318 (319)
T 3frx_A 282 ---------------------SKAAEPHAVSLAWSADGQTLFAGYTD--NVIRVWQVMTA 318 (319)
T ss_dssp ---------------------CGGGCCCEEEEEECTTSSEEEEEETT--SCEEEEEEEEC
T ss_pred ---------------------ccCcCcceeEEEECCCCCEEEEeecC--ceEEEEEEeec
Confidence 01245568999999999999999999 99999998764
No 32
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.4e-44 Score=317.52 Aligned_cols=280 Identities=15% Similarity=0.232 Sum_probs=242.1
Q ss_pred ccccC---eEEcCCCCEEEEEeCCeEEEEecCCCcEEEEee-cC------------------cceeEEEEecCCCeEEEE
Q 014755 8 KQTGP---SCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFS-CL------------------DKISYIEWALDSEYILCG 65 (419)
Q Consensus 8 ~~~~~---~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~-~~------------------~~v~~~~~s~~~~~l~~~ 65 (419)
+|... ++|||||++||+++++.+++|++.+++.+..+. +. ..|.+++|+|+|++|+++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~ 141 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATG 141 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEE
Confidence 45544 899999999999999999999999998877654 21 248999999999999999
Q ss_pred eccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEcc-CC
Q 014755 66 LYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQ-DG 144 (419)
Q Consensus 66 ~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~ 144 (419)
+.| +.|++||+.+++....+.+|...|.+++|+|++++|++++.|+ .|++||+++++......+...+.+++|+| ++
T Consensus 142 ~~d-~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~-~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~ 219 (393)
T 1erj_A 142 AED-RLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDR-TVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDG 219 (393)
T ss_dssp ETT-SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS-EEEEEETTTTEEEEEEECSSCEEEEEECSTTC
T ss_pred cCC-CeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCC-cEEEEECCCCeeEEEEEcCCCcEEEEEECCCC
Confidence 977 8999999999999889999999999999999999999999988 99999999998887555677899999999 88
Q ss_pred CEEEEEeecCCCCeEEEEeccCCeEEEEE-------eccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CC------
Q 014755 145 KFAAICTRRDCKDYINLLSCHTWEIMGVF-------AVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DG------ 210 (419)
Q Consensus 145 ~~l~~~~~~~~~g~v~i~d~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~------ 210 (419)
+++++++.| +.|++||+++++.+..+ ..|...|.+++|+|+++++++ ++.|+.|++||+ +.
T Consensus 220 ~~l~~~s~d---~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s--~s~d~~v~~wd~~~~~~~~~~ 294 (393)
T 1erj_A 220 KYIAAGSLD---RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVS--GSLDRSVKLWNLQNANNKSDS 294 (393)
T ss_dssp CEEEEEETT---SCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEE--EETTSEEEEEEC---------
T ss_pred CEEEEEcCC---CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEE--EeCCCEEEEEECCCCCCcccc
Confidence 999999987 89999999998887766 467889999999999999988 677999999998 32
Q ss_pred ------ceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccc
Q 014755 211 ------RCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQL 284 (419)
Q Consensus 211 ------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (419)
.+...+..|.. .|.+++|+|++++|++++.|+.|++||+.+++++..+.
T Consensus 295 ~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~----------------------- 349 (393)
T 1erj_A 295 KTPNSGTCEVTYIGHKD--FVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ----------------------- 349 (393)
T ss_dssp ------CEEEEEECCSS--CEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEE-----------------------
T ss_pred cCCCCCcceEEEecccC--cEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEC-----------------------
Confidence 23445555554 89999999999999999999999999999988776653
Q ss_pred cceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEcc------CCeEEEEecCCCCce
Q 014755 285 DMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSS------DSQYICTRNDSMPTT 358 (419)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~------~g~~l~~~~~d~~~~ 358 (419)
+|...|.+++|++ ++++||+|+.| ++
T Consensus 350 ----------------------------------------------~h~~~v~~v~~~~~~~~~p~~~~l~sgs~D--g~ 381 (393)
T 1erj_A 350 ----------------------------------------------GHRNSVISVAVANGSSLGPEYNVFATGSGD--CK 381 (393)
T ss_dssp ----------------------------------------------CCSSCEEEEEECSSCTTCTTCEEEEEEETT--SE
T ss_pred ----------------------------------------------CCCCCEEEEEecCCcCcCCCCCEEEEECCC--Cc
Confidence 4777788999875 78999999999 99
Q ss_pred EEEeeccCC
Q 014755 359 LWIWDICRQ 367 (419)
Q Consensus 359 i~iwd~~~~ 367 (419)
|+||++...
T Consensus 382 i~iW~~~~~ 390 (393)
T 1erj_A 382 ARIWKYKKI 390 (393)
T ss_dssp EEEEEEEEC
T ss_pred EEECccccc
Confidence 999998653
No 33
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=6.2e-45 Score=318.82 Aligned_cols=275 Identities=12% Similarity=0.116 Sum_probs=223.6
Q ss_pred cCeEEcCCCCEEEEEe-------CCeEEEEecCCCcE-----EEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEcc
Q 014755 11 GPSCFSPNARYIAVAV-------DYRLVVRDAHSFKV-----VQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLT 78 (419)
Q Consensus 11 ~~~~~s~d~~~la~~~-------~~~i~i~~~~~~~~-----~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~ 78 (419)
.+++|||||++||+++ |+.|++|+..++.. ....+|...|.+++|+|+++++ +++.+ |+|+|||+.
T Consensus 46 ~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l-~~s~d-g~v~lWd~~ 123 (357)
T 4g56_B 46 GAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGIL-VASDS-GAVELWEIL 123 (357)
T ss_dssp EEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEE-EEETT-SCEEEC---
T ss_pred EEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEE-EEECC-CEEEEeecc
Confidence 3489999999999998 45688998877653 2345688999999999998655 45555 899999998
Q ss_pred CCccee----eeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCC-EEEEEee
Q 014755 79 QPEWTC----KIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGK-FAAICTR 152 (419)
Q Consensus 79 ~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~-~l~~~~~ 152 (419)
+++... ...+|...|.+++|+|++++|++++.++ .|++||+++++.+. +..|...+.+++|+|++. ++++++.
T Consensus 124 ~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg-~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~ 202 (357)
T 4g56_B 124 EKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDF-SVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGE 202 (357)
T ss_dssp -----CCCCEEECCCSSCEEEEEECSSSSEEEEEETTS-CEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEET
T ss_pred ccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCC-eEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeecc
Confidence 876432 2347889999999999999999999988 99999999999887 888999999999999985 6778877
Q ss_pred cCCCCeEEEEeccCCeEEEEEe--ccccceeeeeECCCCC-eEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEE
Q 014755 153 RDCKDYINLLSCHTWEIMGVFA--VDTLDLADIEWSPDDS-AIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSI 228 (419)
Q Consensus 153 ~~~~g~v~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~-~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~ 228 (419)
| +.|++||+++++....+. .+...+.+++|+|++. ++++ ++.++.|++||+ +++.+..+..+.. .|+++
T Consensus 203 d---g~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~--g~~d~~i~~wd~~~~~~~~~~~~~~~--~v~~l 275 (357)
T 4g56_B 203 D---GRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFAC--GDETGNVSLVNIKNPDSAQTSAVHSQ--NITGL 275 (357)
T ss_dssp T---SCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEE--EESSSCEEEEESSCGGGCEEECCCSS--CEEEE
T ss_pred C---CceEEEECCCCceeeeeeeccccccccchhhhhcccceEEE--eecccceeEEECCCCcEeEEEeccce--eEEEE
Confidence 6 899999999988766554 4567799999999865 5555 566899999999 8888888887766 89999
Q ss_pred EEccCC-CeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCce
Q 014755 229 SWSPCG-QFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHI 307 (419)
Q Consensus 229 ~~s~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (419)
+|+|++ ++|++++.|++|+|||+++++++..+
T Consensus 276 ~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~----------------------------------------------- 308 (357)
T 4g56_B 276 AYSYHSSPFLASISEDCTVAVLDADFSEVFRDL----------------------------------------------- 308 (357)
T ss_dssp EECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-----------------------------------------------
T ss_pred EEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-----------------------------------------------
Confidence 999987 57999999999999999988776554
Q ss_pred EEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEcc-CCeEEEEecCCCCceEEEeeccCC
Q 014755 308 KVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSS-DSQYICTRNDSMPTTLWIWDICRQ 367 (419)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~d~~~~i~iwd~~~~ 367 (419)
+|...|++++|+| |+++|++++.| ++|++|++.+.
T Consensus 309 -----------------------~H~~~V~~vafsP~d~~~l~s~s~D--g~v~iW~~~~~ 344 (357)
T 4g56_B 309 -----------------------SHRDFVTGVAWSPLDHSKFTTVGWD--HKVLHHHLPSE 344 (357)
T ss_dssp -----------------------CCSSCEEEEEECSSSTTEEEEEETT--SCEEEEECC--
T ss_pred -----------------------CCCCCEEEEEEeCCCCCEEEEEcCC--CeEEEEECCCC
Confidence 3777899999998 89999999999 99999999763
No 34
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.3e-44 Score=308.35 Aligned_cols=295 Identities=17% Similarity=0.268 Sum_probs=228.8
Q ss_pred CcEEEE-eecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCc--ceeee-ec-CCccEeEEEECCCCCEEEEEecCC
Q 014755 38 FKVVQL-FSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPE--WTCKI-DE-GLAGIAYARWSPDSRHILTTSDFQ 112 (419)
Q Consensus 38 ~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~--~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~~~~ 112 (419)
.+++.. .+|.++|.+++|+|+ +|++++.| ++|++||+..+. ....+ .. |...|.+++|+|++++|++++.|+
T Consensus 4 ~~~~~~~~~h~~~v~~~~~s~~--~las~~~D-~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~ 80 (330)
T 2hes_X 4 INLIKSLKLYKEKIWSFDFSQG--ILATGSTD-RKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDS 80 (330)
T ss_dssp CEEEEEEECCSSCEEEEEEETT--EEEEEESS-SCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTS
T ss_pred cccceeeccCCCceeeeccCCC--EEEEEcCC-CEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCC
Confidence 344443 359999999999988 89999877 899999998753 34444 34 889999999999999999999988
Q ss_pred CeEEEEEcCC-------CeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC----CeEEEEEeccccce
Q 014755 113 LRLTVWSLLN-------TACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT----WEIMGVFAVDTLDL 180 (419)
Q Consensus 113 ~~i~iwd~~~-------~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~----~~~~~~~~~~~~~v 180 (419)
.|++||++. .+... +..|...|.+++|+|++++|++++.| +.|++||++. .+.+..+..|...|
T Consensus 81 -~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D---~~v~iwd~~~~~~~~~~~~~~~~h~~~v 156 (330)
T 2hes_X 81 -TVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRD---KSVWIWETDESGEEYECISVLQEHSQDV 156 (330)
T ss_dssp -CEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETT---SCEEEEECCTTCCCCEEEEEECCCSSCE
T ss_pred -cEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCC---CEEEEEeccCCCCCeEEEEEeccCCCce
Confidence 999999853 23344 77899999999999999999999987 8999999943 35677888999999
Q ss_pred eeeeECCCCCeEEEEcCCCCceEEEEcC-CC--ceEEEEeecCCCCceeEEEEccC--CCeEEEEEecCcEEEEEcCCce
Q 014755 181 ADIEWSPDDSAIVIWDSPLEYKVLIYSP-DG--RCLLKYQAYESGLGVKSISWSPC--GQFLAVGSYDQTLRVLNHLTWK 255 (419)
Q Consensus 181 ~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~--~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~d~~i~v~d~~~~~ 255 (419)
.+++|+|++.+|++ ++.|+.|++||. .+ +++..+..|.. .|.+++|+|+ +.+|++++.|++|++||+.++.
T Consensus 157 ~~v~~~p~~~~l~s--~s~D~~i~iW~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~ 232 (330)
T 2hes_X 157 KHVIWHPSEALLAS--SSYDDTVRIWKDYDDDWECVAVLNGHEG--TVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDD 232 (330)
T ss_dssp EEEEECSSSSEEEE--EETTSCEEEEEEETTEEEEEEEECCCSS--CEEEEEECCSSSSCEEEEEETTSCEEEEEEEEEC
T ss_pred EEEEECCCCCEEEE--EcCCCeEEEEECCCCCeeEEEEccCCCC--cEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCC
Confidence 99999999999998 677999999998 44 46667776665 8999999998 6789999999999999986542
Q ss_pred eeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCC-CCCc
Q 014755 256 TFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKP-NPKQ 334 (419)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 334 (419)
...... +. .. ..+. .|..
T Consensus 233 ~~~~~~-------------~~--------------------------------~~----------------~~~~~~h~~ 251 (330)
T 2hes_X 233 EDDQQE-------------WV--------------------------------CE----------------AILPDVHKR 251 (330)
T ss_dssp TTSCEE-------------EE--------------------------------EE----------------EECCSCCSS
T ss_pred ccccce-------------eE--------------------------------Ee----------------eeccccccc
Confidence 100000 00 00 0011 2778
Q ss_pred ceEEEEEccCCeEEEEecCCCCceEEEeeccCCC--ce-ee-cccCC-CeeEEEeCC--CCCeEEEEeCCCcEEEeecCC
Q 014755 335 GIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQE--PA-AI-LVQKD-PIRAATWDP--TCTRLVLCTGSSHLYMWTPSG 407 (419)
Q Consensus 335 ~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~--~~-~~-~~~~~-~v~~~~~s~--~~~~l~s~~~dg~i~vw~~~~ 407 (419)
.|.+++|++++ +|++++.| +.|+|||..+++ +. .. .+|.. .|++++|+| ++++||+++.||+|++|+++.
T Consensus 252 ~v~~v~~s~~~-~l~s~~~d--g~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 252 QVYNVAWGFNG-LIASVGAD--GVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp CEEEEEECTTS-CEEEEETT--SCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred ceEEEEEcCCC-EEEEEeCC--CEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 89999999776 78999998 999999998874 22 22 35776 899999999 788999999999999999875
No 35
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.3e-43 Score=357.81 Aligned_cols=381 Identities=15% Similarity=0.212 Sum_probs=292.6
Q ss_pred ccccC---eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEee-cCcceeEEEEec--CCCeEEEEeccCCeEEEEEccCC
Q 014755 8 KQTGP---SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFS-CLDKISYIEWAL--DSEYILCGLYKRLMIQAWSLTQP 80 (419)
Q Consensus 8 ~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~--~~~~l~~~~~~~g~i~iw~~~~~ 80 (419)
+|... ++|+|||++||+++ ++.|++||+.+++.+..+. |...|.+++|+| ++.++++++.| |.|++||+.++
T Consensus 655 ~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d-~~v~vwd~~~~ 733 (1249)
T 3sfz_A 655 AHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSND-FFLKLWDLNQK 733 (1249)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETT-SCEEEEETTSS
T ss_pred cCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCC-CeEEEEECCCc
Confidence 45554 89999999999998 8899999999999888664 899999999999 55578888866 89999999999
Q ss_pred cceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-e-------------------------------
Q 014755 81 EWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-V------------------------------- 128 (419)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~------------------------------- 128 (419)
+....+.+|...|.+++|+|+++.+++++.++ .|++||+.+++... +
T Consensus 734 ~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg-~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~ 812 (1249)
T 3sfz_A 734 ECRNTMFGHTNSVNHCRFSPDDELLASCSADG-TLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDK 812 (1249)
T ss_dssp SEEEEECCCSSCEEEEEECSSTTEEEEEESSS-EEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSE
T ss_pred chhheecCCCCCEEEEEEecCCCEEEEEECCC-eEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCE
Confidence 99999999999999999999999999999988 99999998765433 1
Q ss_pred ------------------------ccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeee
Q 014755 129 ------------------------QSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIE 184 (419)
Q Consensus 129 ------------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~ 184 (419)
..+...+.+++|+|+++++++++.+ +.|++||+.+++.+..+..|...|.+++
T Consensus 813 l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d---g~v~vwd~~~~~~~~~~~~h~~~v~~v~ 889 (1249)
T 3sfz_A 813 IIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQ---YCVELWNIDSRLKVADCRGHLSWVHGVM 889 (1249)
T ss_dssp EEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSS---SCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred EEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCC---CeEEEEEcCCCceeeecCCCccceEEEE
Confidence 1455667889999999999999886 8999999999999999999999999999
Q ss_pred ECCCCCeEEEEcCCCCceEEEEcC--------------------------------------------------------
Q 014755 185 WSPDDSAIVIWDSPLEYKVLIYSP-------------------------------------------------------- 208 (419)
Q Consensus 185 ~~~~~~~l~~~~~~~~~~i~~~d~-------------------------------------------------------- 208 (419)
|+|+++.+++ ++.|+.+++|++
T Consensus 890 ~spdg~~l~s--~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 967 (1249)
T 3sfz_A 890 FSPDGSSFLT--ASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCC 967 (1249)
T ss_dssp ECTTSSEEEE--EETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEE
T ss_pred ECCCCCEEEE--EeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEE
Confidence 9999998887 555777777773
Q ss_pred ------------------------CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccc
Q 014755 209 ------------------------DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLS 264 (419)
Q Consensus 209 ------------------------~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~ 264 (419)
+++....+..| ...|.+++|+|+|++|++++.|+.|++||+.+++......|..
T Consensus 968 ~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h--~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 1045 (1249)
T 3sfz_A 968 CLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGH--KKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQE 1045 (1249)
T ss_dssp EECTTSSEEEEEETTSCCEEEETTTTSCEEECCCC--SSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSS
T ss_pred EEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccC--CCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCC
Confidence 12222222233 3479999999999999999999999999999988776554544
Q ss_pred cccCCCccceeccCCC---------------c----------ccccceeeeccCccccccccccCCceEEEEEeccCCCC
Q 014755 265 TVRGPCFPAVFKEVDE---------------P----------LQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPIS 319 (419)
Q Consensus 265 ~~~~~~~~~~~~~~~~---------------~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (419)
.+.. +.|.+... . ....+..+++..+.........+ ....+|++.
T Consensus 1046 ~v~~----~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d-~~v~iwd~~----- 1115 (1249)
T 3sfz_A 1046 TVKD----FRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSAD-KTAKIWSFD----- 1115 (1249)
T ss_dssp CEEE----EEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCS-SCCCEECSS-----
T ss_pred cEEE----EEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCC-CcEEEEECC-----
Confidence 4421 22221000 0 00011112222221111111111 122233322
Q ss_pred CCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec----------ccCCCeeEEEeCCCCC
Q 014755 320 LPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL----------VQKDPIRAATWDPTCT 389 (419)
Q Consensus 320 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~----------~~~~~v~~~~~s~~~~ 389 (419)
...+...+.+|...|++++|+|+|++|++++.| |.|++||+.+++..... +|.+.|++++|+|||+
T Consensus 1116 --~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~d--g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~ 1191 (1249)
T 3sfz_A 1116 --LLSPLHELKGHNGCVRCSAFSLDGILLATGDDN--GEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSK 1191 (1249)
T ss_dssp --SSSCSBCCCCCSSCEEEEEECSSSSEEEEEETT--SCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSS
T ss_pred --CcceeeeeccCCCcEEEEEECCCCCEEEEEeCC--CEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCC
Confidence 234455667899999999999999999999999 99999999998876543 5889999999999999
Q ss_pred eEEEEeCCCcEEEeecCCCeEEec
Q 014755 390 RLVLCTGSSHLYMWTPSGAYCVSN 413 (419)
Q Consensus 390 ~l~s~~~dg~i~vw~~~~~~~~~~ 413 (419)
+|++++ |.|++||+.+++.+..
T Consensus 1192 ~l~s~~--g~v~vwd~~~g~~~~~ 1213 (1249)
T 3sfz_A 1192 TLVSAG--GYLKWWNVATGDSSQT 1213 (1249)
T ss_dssp CEEEES--SSEEEBCSSSCBCCCC
T ss_pred EEEECC--CeEEEEECCCCceeee
Confidence 999885 8999999998876544
No 36
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.5e-44 Score=319.63 Aligned_cols=289 Identities=16% Similarity=0.216 Sum_probs=246.1
Q ss_pred hcccccC---eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC
Q 014755 6 AYKQTGP---SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP 80 (419)
Q Consensus 6 ~~~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~ 80 (419)
..+|.+. ++|+|++++|++|+ |++|+|||+.+++....+. |...|.+++|+|+|++|++++.| +.+++|++.+.
T Consensus 62 l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d-~~v~iw~~~~~ 140 (380)
T 3iz6_a 62 LQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLD-SACSIFNLSSQ 140 (380)
T ss_dssp ECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSS-SCCEEEECCCC
T ss_pred ccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCC-CcEEEEECCCC
Confidence 3467665 78999999999998 8999999999998877665 88999999999999999999977 89999998753
Q ss_pred c-------ceeeeecCCccEeEEEECCCC-CEEEEEecCCCeEEEEEcCCCeEEE-e-----ccCCCCeeeEEEcc-CCC
Q 014755 81 E-------WTCKIDEGLAGIAYARWSPDS-RHILTTSDFQLRLTVWSLLNTACVH-V-----QSPKHASKGVAFTQ-DGK 145 (419)
Q Consensus 81 ~-------~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~~i~iwd~~~~~~~~-~-----~~~~~~~~~~~~~~-~~~ 145 (419)
. ....+.+|...+.++.|+|++ ..|++++.|+ .|++||+++++... + ..|...+.+++|++ ++.
T Consensus 141 ~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~-~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 219 (380)
T 3iz6_a 141 ADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQ-TCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNAN 219 (380)
T ss_dssp SSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTS-CEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCC
T ss_pred ccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCC-cEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCC
Confidence 2 344577899999999999974 5688998887 99999999988776 3 46778899999977 788
Q ss_pred EEEEEeecCCCCeEEEEecc-CCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCC-
Q 014755 146 FAAICTRRDCKDYINLLSCH-TWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESG- 222 (419)
Q Consensus 146 ~l~~~~~~~~~g~v~i~d~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~- 222 (419)
++++++.| +.|++||++ ..+.+..+.+|...|.+++|+|+++++++ ++.|+.|++||+ +++.+..+..+...
T Consensus 220 ~l~sgs~D---~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s--~s~D~~i~lwd~~~~~~~~~~~~~~~~~ 294 (380)
T 3iz6_a 220 MFISGSCD---TTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGT--GSDDGTCRLFDMRTGHQLQVYNREPDRN 294 (380)
T ss_dssp EEEEEETT---SCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEE--ECSSSCEEEEETTTTEEEEEECCCCSSS
T ss_pred EEEEEECC---CeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEE--EcCCCeEEEEECCCCcEEEEeccccccc
Confidence 99999987 899999998 45778889999999999999999999998 778999999999 78877777654321
Q ss_pred ----CceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccc
Q 014755 223 ----LGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQG 298 (419)
Q Consensus 223 ----~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (419)
..+.+++|+|+|++|++|+.||.|++||+.+++.+..+...
T Consensus 295 ~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~----------------------------------- 339 (380)
T 3iz6_a 295 DNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTL----------------------------------- 339 (380)
T ss_dssp CCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCS-----------------------------------
T ss_pred ccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecc-----------------------------------
Confidence 24899999999999999999999999999887776654310
Q ss_pred cccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCC
Q 014755 299 NSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQE 368 (419)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~ 368 (419)
..+|.+.|.+++|+|+|++|++|+.| ++|+||++...+
T Consensus 340 ------------------------------~~~h~~~v~~l~~s~dg~~l~sgs~D--~~i~iW~~~~~~ 377 (380)
T 3iz6_a 340 ------------------------------QNSHEGRISCLGLSSDGSALCTGSWD--KNLKIWAFSGHR 377 (380)
T ss_dssp ------------------------------CSSCCCCCCEEEECSSSSEEEEECTT--SCEEEEECCSSS
T ss_pred ------------------------------cCCCCCceEEEEECCCCCEEEEeeCC--CCEEEEecCCCc
Confidence 12488889999999999999999999 999999998654
No 37
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4.3e-43 Score=341.40 Aligned_cols=246 Identities=15% Similarity=0.191 Sum_probs=220.6
Q ss_pred cccccC---eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCc
Q 014755 7 YKQTGP---SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPE 81 (419)
Q Consensus 7 ~~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~ 81 (419)
.+|.+. ++|+|+|++||+++ ++.|+|||+.+++.+..+. |..+|.+++|+|++++|++++.+ |.|++||+.+++
T Consensus 10 ~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-g~i~vw~~~~~~ 88 (814)
T 3mkq_A 10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD-FRIRVFNYNTGE 88 (814)
T ss_dssp EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT-SEEEEEETTTCC
T ss_pred ecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCC-CeEEEEECCCCc
Confidence 345554 89999999999998 8899999999998887665 89999999999999999999976 899999999999
Q ss_pred ceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCC-eEEE-eccCCCCeeeEEEcc-CCCEEEEEeecCCCCe
Q 014755 82 WTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNT-ACVH-VQSPKHASKGVAFTQ-DGKFAAICTRRDCKDY 158 (419)
Q Consensus 82 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~-~~~~-~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~g~ 158 (419)
.+..+..|...|.+++|+|++++|++++.++ .|++||++++ .... +..+...+.+++|+| ++..+++++.+ |.
T Consensus 89 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d---g~ 164 (814)
T 3mkq_A 89 KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDL-TVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD---RT 164 (814)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEEEEETTS-EEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETT---SE
T ss_pred EEEEEecCCCCEEEEEEeCCCCEEEEEcCCC-EEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCC---Ce
Confidence 9999999999999999999999999999887 9999999986 4444 778889999999999 88899999887 89
Q ss_pred EEEEeccCCeEEEEEeccc-cceeeeeECC--CCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCC
Q 014755 159 INLLSCHTWEIMGVFAVDT-LDLADIEWSP--DDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCG 234 (419)
Q Consensus 159 v~i~d~~~~~~~~~~~~~~-~~v~~~~~~~--~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~ 234 (419)
|++||+++++....+..+. ..+.+++|+| ++..+++ ++.++.|++||. +++.+..+..+.. .|.+++|+|++
T Consensus 165 v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~--~~~dg~i~~~d~~~~~~~~~~~~~~~--~v~~~~~~~~~ 240 (814)
T 3mkq_A 165 VKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMIT--ASDDLTIKIWDYQTKSCVATLEGHMS--NVSFAVFHPTL 240 (814)
T ss_dssp EEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEE--ECTTSEEEEEETTTTEEEEEEECCSS--CEEEEEECSSS
T ss_pred EEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEE--EeCCCEEEEEECCCCcEEEEEcCCCC--CEEEEEEcCCC
Confidence 9999999888777776655 8899999999 8999988 677999999999 7888888877665 89999999999
Q ss_pred CeEEEEEecCcEEEEEcCCceeeeeec
Q 014755 235 QFLAVGSYDQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 235 ~~l~~~~~d~~i~v~d~~~~~~~~~~~ 261 (419)
++|++++.||.|++||+.+++.+..+.
T Consensus 241 ~~l~~~~~dg~v~vwd~~~~~~~~~~~ 267 (814)
T 3mkq_A 241 PIIISGSEDGTLKIWNSSTYKVEKTLN 267 (814)
T ss_dssp SEEEEEETTSCEEEEETTTCSEEEEEC
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEee
Confidence 999999999999999999998888876
No 38
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-43 Score=309.00 Aligned_cols=296 Identities=14% Similarity=0.244 Sum_probs=236.2
Q ss_pred hccccc----CeEEcCCCCEEEEEe-CCeEEEEecCCCcEEE--E--eecCcceeEEEEecCCCeEEEEeccCCeEEEEE
Q 014755 6 AYKQTG----PSCFSPNARYIAVAV-DYRLVVRDAHSFKVVQ--L--FSCLDKISYIEWALDSEYILCGLYKRLMIQAWS 76 (419)
Q Consensus 6 ~~~~~~----~~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~--~--~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~ 76 (419)
..+|.. .++|+|||++||+++ |+.|+|||+.+++... . .+|...|.+++|+|+|++|++++.| +++++|+
T Consensus 11 ~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D-~~v~iw~ 89 (345)
T 3fm0_A 11 VPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD-ATTCIWK 89 (345)
T ss_dssp ECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT-SCEEEEE
T ss_pred ecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC-CcEEEEE
Confidence 346665 389999999999998 8899999998876432 2 3589999999999999999999977 8999999
Q ss_pred ccCCc--ceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCe---EEE-eccCCCCeeeEEEccCCCEEEEE
Q 014755 77 LTQPE--WTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTA---CVH-VQSPKHASKGVAFTQDGKFAAIC 150 (419)
Q Consensus 77 ~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~---~~~-~~~~~~~~~~~~~~~~~~~l~~~ 150 (419)
+..+. .+..+.+|...|.+++|+|++++|++++.|+ .|++||++++. ... +..|...+.+++|+|++++|+++
T Consensus 90 ~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~-~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~ 168 (345)
T 3fm0_A 90 KNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK-SVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASA 168 (345)
T ss_dssp ECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTS-CEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEE
T ss_pred ccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCC-eEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEE
Confidence 98764 4667889999999999999999999999988 99999998753 233 67888899999999999999999
Q ss_pred eecCCCCeEEEEeccCCe--EEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-C-C--------------ce
Q 014755 151 TRRDCKDYINLLSCHTWE--IMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-D-G--------------RC 212 (419)
Q Consensus 151 ~~~~~~g~v~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~-~--------------~~ 212 (419)
+.| +.|++||.++++ ....+.+|...|.+++|+|++++|++ ++.|+.|++|+. . + ++
T Consensus 169 s~d---~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s--~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~ 243 (345)
T 3fm0_A 169 SYD---DTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLAS--CSDDRTVRIWRQYLPGNEQGVACSGSDPSWKC 243 (345)
T ss_dssp ETT---SCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEE--EETTSCEEEEEEECTTCTTCCCCC---CEEEE
T ss_pred eCC---CcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEE--EeCCCeEEEeccccCCCCccceeeccCCccce
Confidence 987 899999998875 44678889999999999999999998 677999999986 2 1 12
Q ss_pred EEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeecc
Q 014755 213 LLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLN 292 (419)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (419)
+..+.. .+...|.+++|+|++..|++++.|+.|++|+........... +..
T Consensus 244 ~~~~~~-~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~-------------~~~--------------- 294 (345)
T 3fm0_A 244 ICTLSG-FHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPT-------------FSL--------------- 294 (345)
T ss_dssp EEEECS-SCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCC-------------EEE---------------
T ss_pred eEEecC-CCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceee-------------EEE---------------
Confidence 223332 133479999999999999999999999999986543211000 000
Q ss_pred CccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCC-eEEEEecCCCCceEEEeeccCCCcee
Q 014755 293 DDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDS-QYICTRNDSMPTTLWIWDICRQEPAA 371 (419)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~d~~~~i~iwd~~~~~~~~ 371 (419)
. .....+|...|++++|+|++ .+||+++.| |+|++|++.+++...
T Consensus 295 -----------------~---------------~~~~~~h~~~V~~v~~~p~~~~~laS~s~D--g~v~~W~~~~~~~~~ 340 (345)
T 3fm0_A 295 -----------------T---------------AHLHQAHSQDVNCVAWNPKEPGLLASCSDD--GEVAFWKYQRPEGLH 340 (345)
T ss_dssp -----------------E---------------EEETTSSSSCEEEEEECSSSTTEEEEEETT--SCEEEEEECC-----
T ss_pred -----------------E---------------eeecccccCcEeEeEEeCCCceEEEEcCCC--CcEEEEEecCCCCcc
Confidence 0 00012588899999999998 499999999 999999998876543
No 39
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=4.1e-43 Score=306.49 Aligned_cols=287 Identities=16% Similarity=0.162 Sum_probs=241.2
Q ss_pred EeecCcceeEEEEecC-CCeEEEEeccCCeEEEEEccCCc-----ceeeeecCCccEeEEEECCCCCEEEEEecCCCeEE
Q 014755 43 LFSCLDKISYIEWALD-SEYILCGLYKRLMIQAWSLTQPE-----WTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLT 116 (419)
Q Consensus 43 ~~~~~~~v~~~~~s~~-~~~l~~~~~~~g~i~iw~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~ 116 (419)
+.+|.+.|++|+|+|+ +++|++++.| ++|+|||+.+.+ +...+.+|...|.+++|+|++++|++++.|+ .|+
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~s~D-~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~-~i~ 111 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSASRD-KTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDG-TLR 111 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEETT-SCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS-EEE
T ss_pred ECCccCCEEEEEEeCCCCCEEEEEcCC-CeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccc-cce
Confidence 3459999999999997 6899999977 899999998654 3456788999999999999999999999988 999
Q ss_pred EEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEE-EEEeccccceeeeeECCCCCeEEE
Q 014755 117 VWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIM-GVFAVDTLDLADIEWSPDDSAIVI 194 (419)
Q Consensus 117 iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~ 194 (419)
+|+........ ...+...+....+++++.++++++.| +.+++||+...... .....|...+..++|++++...++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d---~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 188 (340)
T 4aow_A 112 LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD---KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPII 188 (340)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT---SCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEE
T ss_pred EEeecccceeeeecCCCCceeEEEEeecCccceeecCC---CeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEE
Confidence 99999988777 66677778999999999999999987 89999999875543 345667888999999988754333
Q ss_pred EcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccc
Q 014755 195 WDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPA 273 (419)
Q Consensus 195 ~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~ 273 (419)
..++.++.|++||+ +++.+..+..|.. .|++++|+|++++|++++.|+.|++||+.+.+++..+.
T Consensus 189 ~s~~~d~~i~i~d~~~~~~~~~~~~h~~--~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~------------ 254 (340)
T 4aow_A 189 VSCGWDKLVKVWNLANCKLKTNHIGHTG--YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD------------ 254 (340)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSS--CEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE------------
T ss_pred EEEcCCCEEEEEECCCCceeeEecCCCC--cEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeec------------
Confidence 33677999999999 7788888877666 89999999999999999999999999999988777654
Q ss_pred eeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecC
Q 014755 274 VFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRND 353 (419)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 353 (419)
+...|.+++|+|++.+++++ .
T Consensus 255 ----------------------------------------------------------~~~~v~~~~~~~~~~~~~~~-~ 275 (340)
T 4aow_A 255 ----------------------------------------------------------GGDIINALCFSPNRYWLCAA-T 275 (340)
T ss_dssp ----------------------------------------------------------CSSCEEEEEECSSSSEEEEE-E
T ss_pred ----------------------------------------------------------CCceEEeeecCCCCceeecc-C
Confidence 23347899999998766555 5
Q ss_pred CCCceEEEeeccCCCceeec----------ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCe
Q 014755 354 SMPTTLWIWDICRQEPAAIL----------VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAY 409 (419)
Q Consensus 354 d~~~~i~iwd~~~~~~~~~~----------~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~ 409 (419)
| +.|++||++++.+...+ +|...|++++|+|||++|++++.||.|+||++++|+
T Consensus 276 d--~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 276 G--PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp T--TEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred C--CEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 6 99999999887554322 488899999999999999999999999999999875
No 40
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=8.2e-43 Score=300.63 Aligned_cols=281 Identities=16% Similarity=0.273 Sum_probs=244.9
Q ss_pred cccccC---eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCc
Q 014755 7 YKQTGP---SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPE 81 (419)
Q Consensus 7 ~~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~ 81 (419)
.+|... ++|+|++++||+++ |+.|++|+..+++....+. |...|.+++|+|++++|++++.| +.|++||+.+++
T Consensus 20 ~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-~~i~vwd~~~~~ 98 (312)
T 4ery_A 20 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDD-KTLKIWDVSSGK 98 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT-SEEEEEETTTCC
T ss_pred cccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCC-CEEEEEECCCCc
Confidence 456555 89999999999998 8899999999988877664 89999999999999999999977 899999999999
Q ss_pred ceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEE
Q 014755 82 WTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYIN 160 (419)
Q Consensus 82 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~ 160 (419)
.+..+..|...|.+++|+|+++++++++.++ .|++||+++++... +..+...+.+++|+|+++++++++.| +.|+
T Consensus 99 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~-~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~ 174 (312)
T 4ery_A 99 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE-SVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD---GLCR 174 (312)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEEEEETTS-CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT---SCEE
T ss_pred EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCC-cEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCC---CcEE
Confidence 9999999999999999999999999999988 99999999988777 77888899999999999999999987 8999
Q ss_pred EEeccCCeEEEEEe-ccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEc-cCCCeE
Q 014755 161 LLSCHTWEIMGVFA-VDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWS-PCGQFL 237 (419)
Q Consensus 161 i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l 237 (419)
+||+++++.+..+. .+...+..++|+|+++++++ ++.++.|++||+ +++.+..+..+..........++ +++++|
T Consensus 175 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 252 (312)
T 4ery_A 175 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILA--ATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWI 252 (312)
T ss_dssp EEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEE--EETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEE
T ss_pred EEECCCCceeeEEeccCCCceEEEEECCCCCEEEE--EcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEE
Confidence 99999988877664 45567899999999999998 667999999999 78888888776653233333444 678899
Q ss_pred EEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCC
Q 014755 238 AVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIP 317 (419)
Q Consensus 238 ~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (419)
++++.|+.|++||+.+++.+..+.
T Consensus 253 ~sg~~dg~i~vwd~~~~~~~~~~~-------------------------------------------------------- 276 (312)
T 4ery_A 253 VSGSEDNLVYIWNLQTKEIVQKLQ-------------------------------------------------------- 276 (312)
T ss_dssp EECCTTSCEEEEETTTCCEEEEEC--------------------------------------------------------
T ss_pred EEECCCCEEEEEECCCchhhhhhh--------------------------------------------------------
Confidence 999999999999999888776653
Q ss_pred CCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEec--CCCCceEEEeecc
Q 014755 318 ISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRN--DSMPTTLWIWDIC 365 (419)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~--~d~~~~i~iwd~~ 365 (419)
+|...|.+++|+|+++++++++ .| +.|++|+.+
T Consensus 277 -------------~h~~~v~~~~~~p~~~~l~s~~~~~d--~~i~~W~~d 311 (312)
T 4ery_A 277 -------------GHTDVVISTACHPTENIIASAALEND--KTIKLWKSD 311 (312)
T ss_dssp -------------CCSSCEEEEEECSSSSEEEEEECTTT--CCEEEEECC
T ss_pred -------------ccCCcEEEEeecCcCCceEEEEccCC--ccEEEecCC
Confidence 4777799999999999999987 46 999999864
No 41
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-43 Score=344.05 Aligned_cols=368 Identities=13% Similarity=0.111 Sum_probs=259.8
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcce--------
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWT-------- 83 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~-------- 83 (419)
++|+| |++|++++ |++|+|||+.+++.+..+.|.+.|++++|+|++++|++|+.| |+|++||+++++..
T Consensus 64 l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~d-g~V~lwd~~~~~~~~~~i~~~~ 141 (902)
T 2oaj_A 64 MRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQN-GSMIVYDIDRDQLSSFKLDNLQ 141 (902)
T ss_dssp EEEET-TTEEEEEETTCEEEEEETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETT-SCEEEEETTTTEEEEEEECCHH
T ss_pred EEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCC-CcEEEEECCCCccccceecccc
Confidence 89999 88999998 889999999999999888888999999999999999999977 89999999988653
Q ss_pred ---eeeecCCccEeEEEECCCC-CEEEEEecCCCeEEEEEcCCCeEEE-eccC------------------CCCeeeEEE
Q 014755 84 ---CKIDEGLAGIAYARWSPDS-RHILTTSDFQLRLTVWSLLNTACVH-VQSP------------------KHASKGVAF 140 (419)
Q Consensus 84 ---~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~------------------~~~~~~~~~ 140 (419)
..+.+|..+|.+++|+|++ ..+++++.++ .| +||+++++... +..+ ...|.+++|
T Consensus 142 ~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg-~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~f 219 (902)
T 2oaj_A 142 KSSFFPAARLSPIVSIQWNPRDIGTVLISYEYV-TL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLY 219 (902)
T ss_dssp HHHTCSSSCCCCCCEEEEETTEEEEEEEECSSC-EE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEE
T ss_pred ccccccccCCCCeEEEEEccCCCCEEEEEeCCC-cE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEE
Confidence 2345688899999999964 6777777776 99 99999998876 4433 366899999
Q ss_pred ccCCCEEEEEeecCCCCeEEEEeccCCeEEEE--Ee---c-------------cccceeeeeEC----CCCCe-EEEEcC
Q 014755 141 TQDGKFAAICTRRDCKDYINLLSCHTWEIMGV--FA---V-------------DTLDLADIEWS----PDDSA-IVIWDS 197 (419)
Q Consensus 141 ~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~--~~---~-------------~~~~v~~~~~~----~~~~~-l~~~~~ 197 (419)
+|+|++|++++.| |.|++||+++++++.. +. . +...|.+++|+ |++.. +++...
T Consensus 220 spdg~~lasgs~D---g~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~ 296 (902)
T 2oaj_A 220 HPNSLHIITIHED---NSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKS 296 (902)
T ss_dssp CTTSSEEEEEETT---CCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEEC
T ss_pred cCCCCEEEEEECC---CeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCC
Confidence 9999999999987 8999999999887653 21 1 23468889994 44322 222100
Q ss_pred --------------------------------------------------------------------------CCCceE
Q 014755 198 --------------------------------------------------------------------------PLEYKV 203 (419)
Q Consensus 198 --------------------------------------------------------------------------~~~~~i 203 (419)
+.++.|
T Consensus 297 ~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l 376 (902)
T 2oaj_A 297 ISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEI 376 (902)
T ss_dssp STTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCE
T ss_pred CCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcE
Confidence 012445
Q ss_pred EEEcC-CCceEEE-------Eeec--------------------------------CCCCceeEEEEccCCCeEEEEEec
Q 014755 204 LIYSP-DGRCLLK-------YQAY--------------------------------ESGLGVKSISWSPCGQFLAVGSYD 243 (419)
Q Consensus 204 ~~~d~-~~~~~~~-------~~~~--------------------------------~~~~~v~~~~~s~~~~~l~~~~~d 243 (419)
++||+ +|..... +..+ .+...+.+++|+|++++|++|+.|
T Consensus 377 ~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~D 456 (902)
T 2oaj_A 377 ETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSN 456 (902)
T ss_dssp EEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETT
T ss_pred EEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCC
Confidence 55555 3321111 0000 011123445668999999999999
Q ss_pred CcEEEEEcCCceeee--ee----------cccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEE
Q 014755 244 QTLRVLNHLTWKTFA--EF----------MHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRY 311 (419)
Q Consensus 244 ~~i~v~d~~~~~~~~--~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (419)
++|++||+.++.... .+ .|.. ....++|++ +....+....+| ...+|
T Consensus 457 gtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~----~V~svafsp----------------dg~~LAsgs~Dg-tV~lw 515 (902)
T 2oaj_A 457 GSVRIYDASHGDIQDNASFEVNLSRTLNKAKEL----AVDKISFAA----------------ETLELAVSIETG-DVVLF 515 (902)
T ss_dssp SEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSC----CEEEEEEET----------------TTTEEEEEETTS-CEEEE
T ss_pred CcEEEEECCCccccCCceEEeechhhcCCCCCC----ceeEEEecC----------------CCCeEEEEecCc-EEEEE
Confidence 999999998874211 11 1111 122344542 222222222222 23333
Q ss_pred EeccCCC----------C---------C-------------------CCCCCCCCCCCCCcceEEEEEccCCeEEEEecC
Q 014755 312 EVMEIPI----------S---------L-------------------PFQKPPTDKPNPKQGIGLMSWSSDSQYICTRND 353 (419)
Q Consensus 312 ~~~~~~~----------~---------~-------------------~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 353 (419)
++..... . + ..+.+...+.+|.+.|++++||||| +||+|+.
T Consensus 516 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~ 594 (902)
T 2oaj_A 516 KYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYA 594 (902)
T ss_dssp EEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEET
T ss_pred EecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeC
Confidence 3332100 0 0 0011234556799999999999999 9999999
Q ss_pred CCCceEEEeeccCCCcee------ec-ccCCCeeEEEeC-----CCC---CeEEEEeCCCcEEEeec---CCCeEE
Q 014755 354 SMPTTLWIWDICRQEPAA------IL-VQKDPIRAATWD-----PTC---TRLVLCTGSSHLYMWTP---SGAYCV 411 (419)
Q Consensus 354 d~~~~i~iwd~~~~~~~~------~~-~~~~~v~~~~~s-----~~~---~~l~s~~~dg~i~vw~~---~~~~~~ 411 (419)
| ++|+|||++++.++. .. +|...|++++|+ ||| ++|++++.|++|++|++ .+|++.
T Consensus 595 D--~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~ 668 (902)
T 2oaj_A 595 A--GSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFD 668 (902)
T ss_dssp T--SEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEE
T ss_pred C--CcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEE
Confidence 9 999999998876542 11 688999999999 886 79999999999999999 565544
No 42
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-42 Score=304.64 Aligned_cols=291 Identities=12% Similarity=0.132 Sum_probs=253.9
Q ss_pred EEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEc
Q 014755 41 VQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSL 120 (419)
Q Consensus 41 ~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~ 120 (419)
..+.+|.+.|.+++|+|++++|++++.| |.|++||+.+++.+..+..|...|.+++|+|++++|++++.++ .|++||+
T Consensus 26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~d-g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg-~i~iwd~ 103 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEGDLLFSCSKD-SSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADY-SIKLWDV 103 (369)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEESS-SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTT-EEEEEET
T ss_pred EEEEEeeceEEEEEEcCCCCEEEEEeCC-CEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEC
Confidence 3455699999999999999999999976 8999999999999999999999999999999999999999988 9999999
Q ss_pred CCCeEEEeccCCCCeeeEEEccCCCEEEEEeec--CCCCeEEEEeccCCe-----------EEEEEecccc--ceeeeeE
Q 014755 121 LNTACVHVQSPKHASKGVAFTQDGKFAAICTRR--DCKDYINLLSCHTWE-----------IMGVFAVDTL--DLADIEW 185 (419)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~g~v~i~d~~~~~-----------~~~~~~~~~~--~v~~~~~ 185 (419)
.+++......+...+.+++|+|+++++++++.+ ...+.|++||++... ....+..+.. .+.+++|
T Consensus 104 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (369)
T 3zwl_B 104 SNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGW 183 (369)
T ss_dssp TTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEE
T ss_pred CCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEE
Confidence 999888855588899999999999999998764 122699999997653 3334444555 8999999
Q ss_pred CCCCCeEEEEcCCCCceEEEEcC-C-CceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeeccc
Q 014755 186 SPDDSAIVIWDSPLEYKVLIYSP-D-GRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHL 263 (419)
Q Consensus 186 ~~~~~~l~~~~~~~~~~i~~~d~-~-~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~ 263 (419)
+|+++.+++ +..++.|++||+ + ++.+..+..+.. .|.+++|+|++++|++++.|+.|++||+.+++.+..+.
T Consensus 184 ~~~~~~l~~--~~~dg~i~i~d~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-- 257 (369)
T 3zwl_B 184 STKGKYIIA--GHKDGKISKYDVSNNYEYVDSIDLHEK--SISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-- 257 (369)
T ss_dssp CGGGCEEEE--EETTSEEEEEETTTTTEEEEEEECCSS--CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE--
T ss_pred cCCCCEEEE--EcCCCEEEEEECCCCcEeEEEEecCCC--ceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec--
Confidence 999999998 567899999999 4 677777777665 89999999999999999999999999999988777664
Q ss_pred ccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEcc
Q 014755 264 STVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSS 343 (419)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 343 (419)
+...+..++|+|
T Consensus 258 --------------------------------------------------------------------~~~~~~~~~~~~ 269 (369)
T 3zwl_B 258 --------------------------------------------------------------------TDCPLNTAVITP 269 (369)
T ss_dssp --------------------------------------------------------------------CSSCEEEEEECS
T ss_pred --------------------------------------------------------------------CCCCceeEEecC
Confidence 334578999999
Q ss_pred CCeEEEEecCCCCc--------------eEEEeeccCCCceeec-ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCC
Q 014755 344 DSQYICTRNDSMPT--------------TLWIWDICRQEPAAIL-VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGA 408 (419)
Q Consensus 344 ~g~~l~~~~~d~~~--------------~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~ 408 (419)
+++++++++.+ + .+++||+.+++....+ +|...|++++|+|++++|++++.||.|++|+++++
T Consensus 270 ~~~~l~~~~~~--~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 270 LKEFIILGGGQ--EAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp SSSEEEEEECC--C-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHH
T ss_pred CCceEEEeecC--CCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccc
Confidence 99999999987 6 8999999999888766 59999999999999999999999999999999864
Q ss_pred e
Q 014755 409 Y 409 (419)
Q Consensus 409 ~ 409 (419)
.
T Consensus 348 ~ 348 (369)
T 3zwl_B 348 Y 348 (369)
T ss_dssp H
T ss_pred c
Confidence 3
No 43
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.9e-42 Score=325.25 Aligned_cols=315 Identities=15% Similarity=0.173 Sum_probs=256.8
Q ss_pred eEEcCCCC-EEEEEe-CCeEEEEecCCCcEEEEee-cCc---ceeEEEEecC-CCeEEEEeccCCeEEEEEccCCcceee
Q 014755 13 SCFSPNAR-YIAVAV-DYRLVVRDAHSFKVVQLFS-CLD---KISYIEWALD-SEYILCGLYKRLMIQAWSLTQPEWTCK 85 (419)
Q Consensus 13 ~~~s~d~~-~la~~~-~~~i~i~~~~~~~~~~~~~-~~~---~v~~~~~s~~-~~~l~~~~~~~g~i~iw~~~~~~~~~~ 85 (419)
++|+|+++ +|++++ ++.|++||+.+++.+..+. |.. .|.+++|+|+ +++|++++.+ |.|++||+.+++.+..
T Consensus 166 ~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-g~i~vwd~~~~~~~~~ 244 (615)
T 1pgu_A 166 CHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSD-RKISCFDGKSGEFLKY 244 (615)
T ss_dssp EEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETT-CCEEEEETTTCCEEEE
T ss_pred EEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCC-CeEEEEECCCCCEeEE
Confidence 89999998 788887 8899999999999888765 777 8999999999 9999999976 8999999999998888
Q ss_pred e-e---cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccC----CCCeeeEEEccCCCEEEEEeecCCC
Q 014755 86 I-D---EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSP----KHASKGVAFTQDGKFAAICTRRDCK 156 (419)
Q Consensus 86 ~-~---~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~ 156 (419)
+ . .|...|.+++|+ ++++|++++.++ .|++||+++++... +..+ ...+.++.|+ +++++++++.+
T Consensus 245 ~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~-~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~--- 318 (615)
T 1pgu_A 245 IEDDQEPVQGGIFALSWL-DSQKFATVGADA-TIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLD--- 318 (615)
T ss_dssp CCBTTBCCCSCEEEEEES-SSSEEEEEETTS-EEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETT---
T ss_pred ecccccccCCceEEEEEc-CCCEEEEEcCCC-cEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECC---
Confidence 8 5 889999999999 999999999987 99999999988877 4444 2456777775 88999999886
Q ss_pred CeEEEEeccCCeEEEEEeccccceeeeeECCC---------------------------------CCeEEEEc-------
Q 014755 157 DYINLLSCHTWEIMGVFAVDTLDLADIEWSPD---------------------------------DSAIVIWD------- 196 (419)
Q Consensus 157 g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~---------------------------------~~~l~~~~------- 196 (419)
+.|++||+++++.+..+..|...|.+++| |+ +..+++..
T Consensus 319 g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~ 397 (615)
T 1pgu_A 319 GTLNFYELGHDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKV 397 (615)
T ss_dssp SCEEEEETTEEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEE
T ss_pred CCEEEEECCCCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEE
Confidence 89999999988888887776666655555 43 33333210
Q ss_pred ----------------------------------------------------------------CCC-CceEEEEcCCCc
Q 014755 197 ----------------------------------------------------------------SPL-EYKVLIYSPDGR 211 (419)
Q Consensus 197 ----------------------------------------------------------------~~~-~~~i~~~d~~~~ 211 (419)
+.. ++.|++||+...
T Consensus 398 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~ 477 (615)
T 1pgu_A 398 NGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDL 477 (615)
T ss_dssp TTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEE
T ss_pred EEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCc
Confidence 111 455555555222
Q ss_pred eEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeec
Q 014755 212 CLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCL 291 (419)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (419)
.+.......+...|.+++|+|++++|++++.|+.|++||+.+++.+..+.
T Consensus 478 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~------------------------------ 527 (615)
T 1pgu_A 478 EVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRW------------------------------ 527 (615)
T ss_dssp EEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCS------------------------------
T ss_pred cccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEee------------------------------
Confidence 22112222344589999999999999999999999999999988766543
Q ss_pred cCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCC-CCcceEEEEEcc----------CCeEEEEecCCCCceEE
Q 014755 292 NDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPN-PKQGIGLMSWSS----------DSQYICTRNDSMPTTLW 360 (419)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~----------~g~~l~~~~~d~~~~i~ 360 (419)
+ |...|++++|+| ++++||+++.| +.|+
T Consensus 528 ---------------------------------------~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~d--g~i~ 566 (615)
T 1pgu_A 528 ---------------------------------------AFRTSKINAISWKPAEKGANEEEIEEDLVATGSLD--TNIF 566 (615)
T ss_dssp ---------------------------------------CCCSSCEEEEEECCCC------CCSCCEEEEEETT--SCEE
T ss_pred ---------------------------------------cCCCCceeEEEEcCccccccccccCCCEEEEEcCC--CcEE
Confidence 2 677899999999 99999999999 9999
Q ss_pred EeeccCC-Cceeec-ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCC
Q 014755 361 IWDICRQ-EPAAIL-VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSG 407 (419)
Q Consensus 361 iwd~~~~-~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 407 (419)
+||+.++ ++...+ +|...|++++|+|+++ |++++.||.|++|+++.
T Consensus 567 iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 567 IYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp EEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred EEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence 9999997 666655 5999999999999999 99999999999999875
No 44
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.3e-42 Score=300.55 Aligned_cols=290 Identities=12% Similarity=0.174 Sum_probs=235.3
Q ss_pred hcccccC---eEE-----cC-CCCEEEEEe-CCeEEEEecCCCc-------EEE-EeecCcceeEEEEecCCCeEEEEec
Q 014755 6 AYKQTGP---SCF-----SP-NARYIAVAV-DYRLVVRDAHSFK-------VVQ-LFSCLDKISYIEWALDSEYILCGLY 67 (419)
Q Consensus 6 ~~~~~~~---~~~-----s~-d~~~la~~~-~~~i~i~~~~~~~-------~~~-~~~~~~~v~~~~~s~~~~~l~~~~~ 67 (419)
..+|... ++| +| |+++||+|+ |++|++||+.+.+ ... ..+|...|.+++|+|++.++++++.
T Consensus 17 l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~ 96 (343)
T 2xzm_R 17 LEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSW 96 (343)
T ss_dssp EECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEET
T ss_pred eccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcC
Confidence 4567765 677 76 999999998 8899999987542 333 3459999999999999999999997
Q ss_pred cCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEec---cCCCCeeeEEEccCC
Q 014755 68 KRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQ---SPKHASKGVAFTQDG 144 (419)
Q Consensus 68 ~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~ 144 (419)
| ++|++||+.+++....+.+|...|.+++|+|++++|++++.|+ .|++||+......... .+...+.+++|+|++
T Consensus 97 D-~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~-~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 174 (343)
T 2xzm_R 97 D-KTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAER-EIKLWNILGECKFSSAEKENHSDWVSCVRYSPIM 174 (343)
T ss_dssp T-SEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTS-CEEEEESSSCEEEECCTTTSCSSCEEEEEECCCC
T ss_pred C-CcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCC-EEEEEeccCCceeeeecccCCCceeeeeeecccc
Confidence 7 8999999999999999999999999999999999999999988 9999999865544432 677789999999987
Q ss_pred ----------CEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CC-ce
Q 014755 145 ----------KFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DG-RC 212 (419)
Q Consensus 145 ----------~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~-~~ 212 (419)
.++++++.| +.|++|| ...+....+..|...|.+++|+|++++|++ ++.|+.|++||+ .. ..
T Consensus 175 ~~~~~~~~~~~~l~s~~~d---~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~s--gs~dg~v~iwd~~~~~~~ 248 (343)
T 2xzm_R 175 KSANKVQPFAPYFASVGWD---GRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIAT--GGKDKKLLIWDILNLTYP 248 (343)
T ss_dssp CSCSCCCSSCCEEEEEETT---SEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEE--EETTCEEEEEESSCCSSC
T ss_pred ccccccCCCCCEEEEEcCC---CEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEE--EcCCCeEEEEECCCCccc
Confidence 689999887 8999999 456777888999999999999999999998 677999999998 43 33
Q ss_pred EEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeee--eecccccccCCCccceeccCCCcccccceeee
Q 014755 213 LLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFA--EFMHLSTVRGPCFPAVFKEVDEPLQLDMSELC 290 (419)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (419)
...+. +.+ .|.+++|+|+++++++ +.|+.|++||+.+++... .+... ..
T Consensus 249 ~~~~~-~~~--~v~~v~~sp~~~~la~-~~d~~v~iw~~~~~~~~~~~~~~~~-~~------------------------ 299 (343)
T 2xzm_R 249 QREFD-AGS--TINQIAFNPKLQWVAV-GTDQGVKIFNLMTQSKAPVCTIEAE-PI------------------------ 299 (343)
T ss_dssp SEEEE-CSS--CEEEEEECSSSCEEEE-EESSCEEEEESSSCCSCSEEECCCC-SG------------------------
T ss_pred ceeec-CCC--cEEEEEECCCCCEEEE-ECCCCEEEEEeCCCCCCceEEeecC-cc------------------------
Confidence 34432 333 6999999999987765 568889999998766543 22100 00
Q ss_pred ccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCC
Q 014755 291 LNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQ 367 (419)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~ 367 (419)
.......+|...|.+++|+|+|++|++|+.| |.|++|+++++
T Consensus 300 ---------------------------------~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~D--g~v~~w~~~~g 341 (343)
T 2xzm_R 300 ---------------------------------TKAEGQKGKNPQCTSLAWNALGKKLFAGFTD--GVIRTFSFETS 341 (343)
T ss_dssp ---------------------------------GGBTTBCCSCCCEEEEEECSSSCCEEEEETT--SEEEEEEEEEE
T ss_pred ---------------------------------hhhhhhcCCCCceEEEEECCCCCeEEEecCC--ceEEEEEEEcc
Confidence 0000122577889999999999999999999 99999998765
No 45
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.6e-41 Score=307.29 Aligned_cols=313 Identities=14% Similarity=0.196 Sum_probs=273.6
Q ss_pred hcccccC--eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCc
Q 014755 6 AYKQTGP--SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPE 81 (419)
Q Consensus 6 ~~~~~~~--~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~ 81 (419)
..+|.+. .+++++|++|++++ |+.|++||+.+++.+..+. |.+.|.+++|+ ++++++++.| |+|++||+.+++
T Consensus 114 l~~h~~~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~d-g~i~vwd~~~~~ 190 (445)
T 2ovr_B 114 LKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTD-RTLKVWNAETGE 190 (445)
T ss_dssp EECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETT-SCEEEEETTTTE
T ss_pred ecccCCCcEEEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCC-CeEEEEECCcCc
Confidence 3467665 46888999999998 8899999999999887665 99999999998 5689999877 899999999999
Q ss_pred ceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEE
Q 014755 82 WTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYIN 160 (419)
Q Consensus 82 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~ 160 (419)
....+..|...|.++.|+ ++.+++++.++ .|++||+++++... +..+...+.++++ +++++++++.+ |.|+
T Consensus 191 ~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg-~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d---g~i~ 262 (445)
T 2ovr_B 191 CIHTLYGHTSTVRCMHLH--EKRVVSGSRDA-TLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYD---FMVK 262 (445)
T ss_dssp EEEEECCCSSCEEEEEEE--TTEEEEEETTS-EEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETT---SCEE
T ss_pred EEEEECCCCCcEEEEEec--CCEEEEEeCCC-EEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCC---CEEE
Confidence 999999999999999995 56899999987 99999999988877 7888999999998 78899999887 8999
Q ss_pred EEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEE
Q 014755 161 LLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAV 239 (419)
Q Consensus 161 i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 239 (419)
+||+++++.+..+..|...+.++.| ++..+++ ++.|+.|++||+ +++.+..+..+.. .+.++.+ +++++++
T Consensus 263 iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~--~~~d~~i~i~d~~~~~~~~~~~~~~~--~v~~~~~--~~~~l~~ 334 (445)
T 2ovr_B 263 VWDPETETCLHTLQGHTNRVYSLQF--DGIHVVS--GSLDTSIRVWDVETGNCIHTLTGHQS--LTSGMEL--KDNILVS 334 (445)
T ss_dssp EEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEE--EETTSCEEEEETTTCCEEEEECCCCS--CEEEEEE--ETTEEEE
T ss_pred EEECCCCcEeEEecCCCCceEEEEE--CCCEEEE--EeCCCeEEEEECCCCCEEEEEcCCcc--cEEEEEE--eCCEEEE
Confidence 9999999999999999999999999 7888888 667999999999 8888888877655 6777776 4679999
Q ss_pred EEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCC
Q 014755 240 GSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPIS 319 (419)
Q Consensus 240 ~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (419)
++.||.|++||+.+++.+..+...
T Consensus 335 ~~~dg~i~vwd~~~~~~~~~~~~~-------------------------------------------------------- 358 (445)
T 2ovr_B 335 GNADSTVKIWDIKTGQCLQTLQGP-------------------------------------------------------- 358 (445)
T ss_dssp EETTSCEEEEETTTCCEEEEECST--------------------------------------------------------
T ss_pred EeCCCeEEEEECCCCcEEEEEccC--------------------------------------------------------
Confidence 999999999999998887776411
Q ss_pred CCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec------ccCCCeeEEEeCCCCCeEEE
Q 014755 320 LPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL------VQKDPIRAATWDPTCTRLVL 393 (419)
Q Consensus 320 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~------~~~~~v~~~~~s~~~~~l~s 393 (419)
..|...|.+++|+ +++|++++.| |.|++||+.+++.+..+ +|.+.|++++|+|++.+|++
T Consensus 359 ----------~~~~~~v~~~~~~--~~~l~s~~~d--g~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~ 424 (445)
T 2ovr_B 359 ----------NKHQSAVTCLQFN--KNFVITSSDD--GTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAV 424 (445)
T ss_dssp ----------TSCSSCEEEEEEC--SSEEEEEETT--SEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEE
T ss_pred ----------CCCCCCEEEEEEC--CCEEEEEeCC--CeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEE
Confidence 1266779999995 5799999999 99999999999887665 58889999999999999999
Q ss_pred EeCCCc----EEEeecCC
Q 014755 394 CTGSSH----LYMWTPSG 407 (419)
Q Consensus 394 ~~~dg~----i~vw~~~~ 407 (419)
++.||+ |.+||+..
T Consensus 425 ~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 425 GSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp ECSSSSSCCEEEEEECCC
T ss_pred cccCCCCccEEEEEECCC
Confidence 999998 99999974
No 46
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=4.5e-42 Score=304.82 Aligned_cols=303 Identities=14% Similarity=0.156 Sum_probs=246.0
Q ss_pred ecCCCcEEEEe-ecCcceeEEEEecCC-CeEEEEeccCCeEEEEEccCCcceeeee--cCCccEeEEEECC-CCCEEEEE
Q 014755 34 DAHSFKVVQLF-SCLDKISYIEWALDS-EYILCGLYKRLMIQAWSLTQPEWTCKID--EGLAGIAYARWSP-DSRHILTT 108 (419)
Q Consensus 34 ~~~~~~~~~~~-~~~~~v~~~~~s~~~-~~l~~~~~~~g~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~~~ 108 (419)
++...+....+ +|...|.+++|+|++ ++|++++.| |.|++||+.+++....+. +|...|.+++|+| ++++|+++
T Consensus 59 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 137 (383)
T 3ei3_B 59 SLKSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKG-GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVS 137 (383)
T ss_dssp HHTTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBT-SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEE
T ss_pred cccccceEEeccCCCCCEEEEEECCCCCCEEEEEcCC-CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEE
Confidence 33444555444 589999999999999 899999976 899999999888776665 5899999999999 77899999
Q ss_pred ecCCCeEEEEEcCCCeEEEeccC---CCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeE
Q 014755 109 SDFQLRLTVWSLLNTACVHVQSP---KHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEW 185 (419)
Q Consensus 109 ~~~~~~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~ 185 (419)
+.++ .|++||+++.....+..+ ...+.+++|+|++++|++++.+ +.|++||+ +++.+..+..|...|.+++|
T Consensus 138 ~~d~-~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~i~d~-~~~~~~~~~~h~~~v~~~~~ 212 (383)
T 3ei3_B 138 SIRG-ATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDST---GRLLLLGL-DGHEIFKEKLHKAKVTHAEF 212 (383)
T ss_dssp ETTT-EEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETT---SEEEEEET-TSCEEEEEECSSSCEEEEEE
T ss_pred eCCC-EEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCC---CCEEEEEC-CCCEEEEeccCCCcEEEEEE
Confidence 9887 999999998665554443 3678999999999999999987 89999999 57788889999999999999
Q ss_pred CCCCC-eEEEEcCCCCceEEEEcC-C----CceEEEEeecCCCCceeEEEEcc-CCCeEEEEEecCcEEEEEcCCceeee
Q 014755 186 SPDDS-AIVIWDSPLEYKVLIYSP-D----GRCLLKYQAYESGLGVKSISWSP-CGQFLAVGSYDQTLRVLNHLTWKTFA 258 (419)
Q Consensus 186 ~~~~~-~l~~~~~~~~~~i~~~d~-~----~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~v~d~~~~~~~~ 258 (419)
+|+++ .+++ ++.|+.|++||+ + +..+..+ .+.. .|.+++|+| ++++|++++.|+.|++||+.+++...
T Consensus 213 ~~~~~~~l~s--~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~--~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 287 (383)
T 3ei3_B 213 NPRCDWLMAT--SSVDATVKLWDLRNIKDKNSYIAEM-PHEK--PVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPD 287 (383)
T ss_dssp CSSCTTEEEE--EETTSEEEEEEGGGCCSTTCEEEEE-ECSS--CEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCS
T ss_pred CCCCCCEEEE--EeCCCEEEEEeCCCCCcccceEEEe-cCCC--ceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccc
Confidence 99999 7777 567999999999 4 5555555 4444 899999999 99999999999999999999988776
Q ss_pred eec-ccccccC--CCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcc
Q 014755 259 EFM-HLSTVRG--PCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQG 335 (419)
Q Consensus 259 ~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (419)
.+. +...... ......|. ....
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~-------------------------------------------------------p~~~ 312 (383)
T 3ei3_B 288 QIIIHPHRQFQHLTPIKATWH-------------------------------------------------------PMYD 312 (383)
T ss_dssp EEEECCBCCCTTSCCCCCEEC-------------------------------------------------------SSSS
T ss_pred ccccccccccccccceEEecc-------------------------------------------------------CCCC
Confidence 665 3322110 00001111 1234
Q ss_pred eEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc---cCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCC
Q 014755 336 IGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV---QKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSG 407 (419)
Q Consensus 336 v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 407 (419)
+..++|+|+|++ +++.| +.|++||+.+++++..+. |...+..++|+|++++|++++ ||.|++|++++
T Consensus 313 ~~~~~~s~dg~~--s~s~d--~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 313 LIVAGRYPDDQL--LLNDK--RTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp EEEEECBCCTTT--CTTCC--CCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred ceEEEecCCccc--ccCCC--CeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 677899999988 88888 999999999999876663 567788889999999999997 99999999974
No 47
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-43 Score=322.73 Aligned_cols=304 Identities=10% Similarity=0.052 Sum_probs=228.6
Q ss_pred CCeEEEEecCCCcEE----E-EeecCcceeEEEEecC------CCeEEEEeccCCeEEEEEccCCcc-----------ee
Q 014755 27 DYRLVVRDAHSFKVV----Q-LFSCLDKISYIEWALD------SEYILCGLYKRLMIQAWSLTQPEW-----------TC 84 (419)
Q Consensus 27 ~~~i~i~~~~~~~~~----~-~~~~~~~v~~~~~s~~------~~~l~~~~~~~g~i~iw~~~~~~~-----------~~ 84 (419)
|++|+|||+.+++.. . ...|.+.|.+++|+|+ +.+||+++.| |+|++||+.+++. ..
T Consensus 182 D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~D-gtvrlWd~~~~~~~~~~~~~~~~p~~ 260 (524)
T 2j04_B 182 SSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQE-GTINFLEIIDNATDVHVFKMCEKPSL 260 (524)
T ss_dssp CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETT-SCEEEEECCCCSSSSSEEECCCSCSE
T ss_pred CceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecC-CeEEEEEcCCCccccccceeecCceE
Confidence 567999999887642 2 2346789999999997 5799999977 8999999987642 23
Q ss_pred eeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCe-EEE-eccCCCCeeeE--EEccCC-CEEEEEeecCCCCeE
Q 014755 85 KIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTA-CVH-VQSPKHASKGV--AFTQDG-KFAAICTRRDCKDYI 159 (419)
Q Consensus 85 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~-~~~-~~~~~~~~~~~--~~~~~~-~~l~~~~~~~~~g~v 159 (419)
.+.+|...|.+++|++++ .|++++.|+ +|++||+++++ +.. +..|...|.++ +|+|++ .+|++++.| ++|
T Consensus 261 ~l~~h~~~v~sv~~s~~~-~lasgs~Dg-tV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D---~tv 335 (524)
T 2j04_B 261 TLSLADSLITTFDFLSPT-TVVCGFKNG-FVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVD---GYF 335 (524)
T ss_dssp EECCTTTCEEEEEESSSS-EEEEEETTS-EEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETT---SEE
T ss_pred EEEcCCCCEEEEEecCCC-eEEEEeCCC-EEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccC---CeE
Confidence 567788999999999864 799999888 99999999763 333 67899999998 578887 889999987 899
Q ss_pred EEEeccCCeEEEEEecccc--ceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCe
Q 014755 160 NLLSCHTWEIMGVFAVDTL--DLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQF 236 (419)
Q Consensus 160 ~i~d~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 236 (419)
++||+++++....+..|.. .+.+++|+|+++.+++ ++.++.|++||+ ++.++..+..|.. .|++++|+|+|++
T Consensus 336 klWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s--~~~d~tv~lwd~~~~~~~~~l~gH~~--~V~sva~Sp~g~~ 411 (524)
T 2j04_B 336 YIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIY--SDGASSLRAVPSRAAFAVHPLVSRET--TITAIGVSRLHPM 411 (524)
T ss_dssp EEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEE--ECSSSEEEEEETTCTTCCEEEEECSS--CEEEEECCSSCCB
T ss_pred EEEECCCCCcccccccccccCcccceEeCCCcCeEEE--eCCCCcEEEEECcccccceeeecCCC--ceEEEEeCCCCCe
Confidence 9999998877666666543 5789999999999887 566899999999 7777788887666 8999999999999
Q ss_pred EEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccC
Q 014755 237 LAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEI 316 (419)
Q Consensus 237 l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (419)
|++|+.|++|++||+..+ .+..+.....
T Consensus 412 l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~--------------------------------------------------- 439 (524)
T 2j04_B 412 VLAGSADGSLIITNAARR-LLHGIKNSSA--------------------------------------------------- 439 (524)
T ss_dssp CEEEETTTEEECCBSCSS-TTTCC--------------------------------------------------------
T ss_pred EEEEECCCEEEEEechHh-hccccccCcc---------------------------------------------------
Confidence 999999999999997542 1111000000
Q ss_pred CCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecccCCCeeEEEeCCCCC---eEEE
Q 014755 317 PISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCT---RLVL 393 (419)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~---~l~s 393 (419)
..+...+..++|+|++..+.. ..+ ..+..|+.....+..+.+|...|++|+|+|+++ .||+
T Consensus 440 -------------~~~~~~v~~v~~sp~g~~~~~-~~~--~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAs 503 (524)
T 2j04_B 440 -------------TQKSLRLWKWDYSIKDDKYRI-DSS--YEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAF 503 (524)
T ss_dssp --------------CCCCEEEECBCCSSSCEEEE-CCC--CCCCC-------------CCCSCCCEEECCSTTTTTEEEE
T ss_pred -------------ceeeeEEEEeccCCCCCeEEc-cCC--ceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHh
Confidence 001224678999999986533 222 333333322333445557999999999999965 9999
Q ss_pred EeCCCcEEEeecCCC
Q 014755 394 CTGSSHLYMWTPSGA 408 (419)
Q Consensus 394 ~~~dg~i~vw~~~~~ 408 (419)
|+.||.|+||++...
T Consensus 504 g~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 504 SNSAGLLTLEYLSLE 518 (524)
T ss_dssp ECTTSEEEEEECSCC
T ss_pred hccCceEEEEEcccc
Confidence 999999999999754
No 48
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.2e-42 Score=305.62 Aligned_cols=283 Identities=13% Similarity=0.172 Sum_probs=243.3
Q ss_pred cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCc--ceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCC
Q 014755 46 CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPE--WTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNT 123 (419)
Q Consensus 46 ~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~ 123 (419)
|.++|.+++|+|++++|++++.+ +.|++||+.+++ ....+..|...|.+++|+|++++|++++.++ .|++||++++
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d-~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg-~i~vwd~~~~ 84 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNN-HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDR-NAYVWTLKGR 84 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSS-SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTS-CEEEEEEETT
T ss_pred cCCCeEEEEECCCCCEEEEEeCC-CEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCC-eEEEEECCCC
Confidence 88999999999999999999876 899999999987 7788889999999999999999999999887 9999999998
Q ss_pred eEEE---eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeE---EEE-EeccccceeeeeECCCCCeEEEEc
Q 014755 124 ACVH---VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEI---MGV-FAVDTLDLADIEWSPDDSAIVIWD 196 (419)
Q Consensus 124 ~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~---~~~-~~~~~~~v~~~~~~~~~~~l~~~~ 196 (419)
+... +..+...+.+++|+|++++|++++.+ +.|++||++.++. ... ...|...+.+++|+|+++++++
T Consensus 85 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~-- 159 (372)
T 1k8k_C 85 TWKPTLVILRINRAARCVRWAPNEKKFAVGSGS---RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAA-- 159 (372)
T ss_dssp EEEEEEECCCCSSCEEEEEECTTSSEEEEEETT---SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEE--
T ss_pred eeeeeEEeecCCCceeEEEECCCCCEEEEEeCC---CEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEE--
Confidence 7544 46678889999999999999999986 8999999988652 233 3557889999999999999998
Q ss_pred CCCCceEEEEcC-------------------CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceee
Q 014755 197 SPLEYKVLIYSP-------------------DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTF 257 (419)
Q Consensus 197 ~~~~~~i~~~d~-------------------~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~ 257 (419)
++.++.|++||+ .++.+..+..+.. .+.+++|+|++++|++++.|+.|++||+.+++++
T Consensus 160 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 160 GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCG--WVHGVCFSANGSRVAWVSHDSTVCLADADKKMAV 237 (372)
T ss_dssp EETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSS--CEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEE
T ss_pred EcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCC--eEEEEEECCCCCEEEEEeCCCEEEEEECCCCcee
Confidence 567999999994 4667777766555 8999999999999999999999999999988877
Q ss_pred eeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceE
Q 014755 258 AEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIG 337 (419)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 337 (419)
..+. .|...|.
T Consensus 238 ~~~~---------------------------------------------------------------------~~~~~v~ 248 (372)
T 1k8k_C 238 ATLA---------------------------------------------------------------------SETLPLL 248 (372)
T ss_dssp EEEE---------------------------------------------------------------------CSSCCEE
T ss_pred EEEc---------------------------------------------------------------------cCCCCeE
Confidence 6654 2556689
Q ss_pred EEEEccCCeEEEEecCCCCceEEEeeccC--CCc---------------------------------------eeec-cc
Q 014755 338 LMSWSSDSQYICTRNDSMPTTLWIWDICR--QEP---------------------------------------AAIL-VQ 375 (419)
Q Consensus 338 ~~~~s~~g~~l~~~~~d~~~~i~iwd~~~--~~~---------------------------------------~~~~-~~ 375 (419)
+++|+|++++++++ .| +.|++|++.+ ++. ..+. +|
T Consensus 249 ~~~~~~~~~~l~~~-~d--~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 325 (372)
T 1k8k_C 249 AVTFITESSLVAAG-HD--CFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLH 325 (372)
T ss_dssp EEEEEETTEEEEEE-TT--SSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSS
T ss_pred EEEEecCCCEEEEE-eC--CeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccc
Confidence 99999999999988 66 9999999987 421 2222 69
Q ss_pred CCCeeEEEeC-CCC---CeEEEEeCCCcEEEeecCCCe
Q 014755 376 KDPIRAATWD-PTC---TRLVLCTGSSHLYMWTPSGAY 409 (419)
Q Consensus 376 ~~~v~~~~~s-~~~---~~l~s~~~dg~i~vw~~~~~~ 409 (419)
...|++++|+ ++| ++|++++.||.|++|++.+++
T Consensus 326 ~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 326 KNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp SSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred cCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence 9999999966 676 899999999999999997543
No 49
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.9e-42 Score=306.84 Aligned_cols=295 Identities=11% Similarity=0.080 Sum_probs=245.3
Q ss_pred ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCc------ceeeeecCCccEeEEEECCC----C---CEEEEEecC
Q 014755 45 SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPE------WTCKIDEGLAGIAYARWSPD----S---RHILTTSDF 111 (419)
Q Consensus 45 ~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~------~~~~~~~~~~~v~~~~~~~~----~---~~l~~~~~~ 111 (419)
+|.+.|.+++|+| ++|++++.| |.|++|++.+++ ....+..|...|.+++|+|+ + ++|++++.+
T Consensus 14 ~h~~~i~~~~~~~--~~l~s~~~d-g~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~d 90 (397)
T 1sq9_A 14 AHDADIFSVSACN--SFTVSCSGD-GYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFS 90 (397)
T ss_dssp CSSSCEEEEEECS--SEEEEEETT-SEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETT
T ss_pred hhhcCeEEEEecC--CeEEEEcCC-CEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCC
Confidence 5999999999998 799999876 899999999988 77888899999999999999 9 999999998
Q ss_pred CCeEEEEEcCCCe------EEEeccC-----CCCeeeEEEc----cCCCE-EEEEeecCCCCeEEEEeccC------CeE
Q 014755 112 QLRLTVWSLLNTA------CVHVQSP-----KHASKGVAFT----QDGKF-AAICTRRDCKDYINLLSCHT------WEI 169 (419)
Q Consensus 112 ~~~i~iwd~~~~~------~~~~~~~-----~~~~~~~~~~----~~~~~-l~~~~~~~~~g~v~i~d~~~------~~~ 169 (419)
+ .|++||+.+++ ...+..+ ...+.+++|+ |++++ |++++.+ |.|++||+++ ++.
T Consensus 91 g-~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~ 166 (397)
T 1sq9_A 91 G-DLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK---GTTYIWKFHPFADESNSLT 166 (397)
T ss_dssp S-CEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT---SCEEEEEEESSSSHHHHTT
T ss_pred C-CEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC---CcEEEEeCCccccccccce
Confidence 7 99999999877 3446677 4889999999 99999 9999886 8999999998 665
Q ss_pred EE-----EEe-------ccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEee---c---CCCCceeEEEE
Q 014755 170 MG-----VFA-------VDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQA---Y---ESGLGVKSISW 230 (419)
Q Consensus 170 ~~-----~~~-------~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~---~---~~~~~v~~~~~ 230 (419)
+. .+. .|...+.+++|+|++ .+++ +..++.|++||+ +++.+..+.. | .. .+.+++|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~--~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~--~i~~i~~ 241 (397)
T 1sq9_A 167 LNWSPTLELQGTVESPMTPSQFATSVDISERG-LIAT--GFNNGTVQISELSTLRPLYNFESQHSMINNSN--SIRSVKF 241 (397)
T ss_dssp TCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEE--ECTTSEEEEEETTTTEEEEEEECCC---CCCC--CEEEEEE
T ss_pred eeccCcceeeeeeccccCCCCCceEEEECCCc-eEEE--EeCCCcEEEEECCCCceeEEEeccccccccCC--ccceEEE
Confidence 55 663 377889999999999 7777 677999999999 7888888876 5 44 8999999
Q ss_pred ccCCCeEEEEEec---CcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCce
Q 014755 231 SPCGQFLAVGSYD---QTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHI 307 (419)
Q Consensus 231 s~~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (419)
+|++++|++++.| +.|++||+.+++.+..+..+..-.
T Consensus 242 ~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~---------------------------------------- 281 (397)
T 1sq9_A 242 SPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSS---------------------------------------- 281 (397)
T ss_dssp CSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------------------------------------------
T ss_pred CCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccc----------------------------------------
Confidence 9999999999999 999999999988777764210000
Q ss_pred EEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc-------c-----
Q 014755 308 KVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV-------Q----- 375 (419)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~-------~----- 375 (419)
........|...|.+++|+|++++|++++.| +.|++||+.+++++..+. |
T Consensus 282 ----------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 343 (397)
T 1sq9_A 282 ----------------QASLGEFAHSSWVMSLSFNDSGETLCSAGWD--GKLRFWDVKTKERITTLNMHCDDIEIEEDIL 343 (397)
T ss_dssp --------------------CCBSBSSCEEEEEECSSSSEEEEEETT--SEEEEEETTTTEEEEEEECCGGGCSSGGGCC
T ss_pred ----------------cccccccccCCcEEEEEECCCCCEEEEEeCC--CeEEEEEcCCCceeEEEecccCcccchhhhh
Confidence 0000001267789999999999999999999 999999999988765553 5
Q ss_pred ----------CCCeeEEEeCCCC----------CeEEEEeCCCcEEEeecCCCe
Q 014755 376 ----------KDPIRAATWDPTC----------TRLVLCTGSSHLYMWTPSGAY 409 (419)
Q Consensus 376 ----------~~~v~~~~~s~~~----------~~l~s~~~dg~i~vw~~~~~~ 409 (419)
...|++++|+|++ ++|++++.||.|++|++.+++
T Consensus 344 ~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 344 AVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp CBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 8999999999998 799999999999999998764
No 50
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-41 Score=293.51 Aligned_cols=280 Identities=14% Similarity=0.210 Sum_probs=218.9
Q ss_pred hcccccC---eEEcCCCCEEEEEe-CCeEEEEecCCC--cEEEEe--e-cCcceeEEEEecCCCeEEEEeccCCeEEEEE
Q 014755 6 AYKQTGP---SCFSPNARYIAVAV-DYRLVVRDAHSF--KVVQLF--S-CLDKISYIEWALDSEYILCGLYKRLMIQAWS 76 (419)
Q Consensus 6 ~~~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~--~~~~~~--~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~ 76 (419)
..+|... ++|+|+ +||+++ |+.|++||+.++ +....+ . |...|.+++|+|++++|++++.| ++|+|||
T Consensus 10 ~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D-~~v~iw~ 86 (330)
T 2hes_X 10 LKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD-STVSIWA 86 (330)
T ss_dssp EECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT-SCEEEEE
T ss_pred eccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC-CcEEEEE
Confidence 3466665 778887 899998 889999999875 344444 3 88999999999999999999977 8999999
Q ss_pred ccC-------CcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC-C---eEEE-eccCCCCeeeEEEccCC
Q 014755 77 LTQ-------PEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN-T---ACVH-VQSPKHASKGVAFTQDG 144 (419)
Q Consensus 77 ~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~-~---~~~~-~~~~~~~~~~~~~~~~~ 144 (419)
++. .+....+.+|...|.+++|+|++++|++++.|+ .|++||++. + +++. +..|...+.+++|+|++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~-~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 165 (330)
T 2hes_X 87 KEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDK-SVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSE 165 (330)
T ss_dssp C-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTS-CEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSS
T ss_pred cccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCC-EEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCC
Confidence 853 244566788999999999999999999999988 999999953 2 3444 77899999999999999
Q ss_pred CEEEEEeecCCCCeEEEEeccCC--eEEEEEeccccceeeeeECCC--CCeEEEEcCCCCceEEEEcC-CC--------c
Q 014755 145 KFAAICTRRDCKDYINLLSCHTW--EIMGVFAVDTLDLADIEWSPD--DSAIVIWDSPLEYKVLIYSP-DG--------R 211 (419)
Q Consensus 145 ~~l~~~~~~~~~g~v~i~d~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~~~i~~~d~-~~--------~ 211 (419)
.+|++++.| +.|++||..++ +.+..+.+|...|.+++|+|+ +..+++ ++.|+.|++||+ .+ .
T Consensus 166 ~~l~s~s~D---~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s--~s~D~~v~iw~~~~~~~~~~~~~~ 240 (330)
T 2hes_X 166 ALLASSSYD---DTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCS--GSDDSTVRVWKYMGDDEDDQQEWV 240 (330)
T ss_dssp SEEEEEETT---SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEE--EETTSCEEEEEEEEECTTSCEEEE
T ss_pred CEEEEEcCC---CeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEE--EeCCCeEEEEEecCCCccccceeE
Confidence 999999987 89999999876 677888999999999999999 566776 677999999998 32 1
Q ss_pred eEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCcee--eeeecccccccCCCccceeccCCCcccccceee
Q 014755 212 CLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKT--FAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSEL 289 (419)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (419)
....+.. .+...|.+++|++++ +|++++.|+.|++||..+++. ....
T Consensus 241 ~~~~~~~-~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~----------------------------- 289 (330)
T 2hes_X 241 CEAILPD-VHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKR----------------------------- 289 (330)
T ss_dssp EEEECCS-CCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEE-----------------------------
T ss_pred Eeeeccc-ccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEecc-----------------------------
Confidence 2222222 134489999999765 899999999999999876532 1111
Q ss_pred eccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCc-ceEEEEEcc--CCeEEEEecCCCCceEEEeeccC
Q 014755 290 CLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQ-GIGLMSWSS--DSQYICTRNDSMPTTLWIWDICR 366 (419)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~s~--~g~~l~~~~~d~~~~i~iwd~~~ 366 (419)
..+|.. .|.+++|+| ++++||+++.| +.|+|||++.
T Consensus 290 ---------------------------------------~~~h~~~~v~~v~~~~~~~~~~las~s~D--g~v~~W~~~~ 328 (330)
T 2hes_X 290 ---------------------------------------ALCHGVYEINVVKWLELNGKTILATGGDD--GIVNFWSLEK 328 (330)
T ss_dssp ---------------------------------------SCTTTTSCEEEEEEC-----CCEEEEETT--SEEEEEEC--
T ss_pred ---------------------------------------ccccccceEEEEEEecCCCceEEEEecCC--CcEEEEEecc
Confidence 013555 799999999 78999999999 9999999864
No 51
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.2e-41 Score=322.79 Aligned_cols=282 Identities=16% Similarity=0.204 Sum_probs=238.9
Q ss_pred EeecCcceeEEEEecCC-CeEEEEeccCCeEEEEEccCCc-----ceeeeecCCccEeEEEECCCCCEEEEEecCCCeEE
Q 014755 43 LFSCLDKISYIEWALDS-EYILCGLYKRLMIQAWSLTQPE-----WTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLT 116 (419)
Q Consensus 43 ~~~~~~~v~~~~~s~~~-~~l~~~~~~~g~i~iw~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~ 116 (419)
+.+|.+.|++++|+|++ ++|++++.| ++|++|++.+.. ....+.+|...|.+++|+|++++|++++.|+ .|+
T Consensus 378 l~~H~~~V~~v~~~~~~~~~l~s~s~D-~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg-~v~ 455 (694)
T 3dm0_A 378 MRAHTDMVTAIATPIDNADIIVSASRD-KSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDG-ELR 455 (694)
T ss_dssp EECCSSCEEEEECCTTCCSEEEEEETT-SEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTS-EEE
T ss_pred cccCCceeEEEEecCCCCCEEEEEeCC-CcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCC-cEE
Confidence 44699999999999875 688888876 899999997642 3456889999999999999999999999988 999
Q ss_pred EEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEE---eccccceeeeeECCCC--C
Q 014755 117 VWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVF---AVDTLDLADIEWSPDD--S 190 (419)
Q Consensus 117 iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~---~~~~~~v~~~~~~~~~--~ 190 (419)
+||+.+++... +..|...|.+++|+|++++|++++.| ++|++||.......... ..|...|.+++|+|++ .
T Consensus 456 vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D---~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 532 (694)
T 3dm0_A 456 LWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRD---RTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQP 532 (694)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT---SCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSC
T ss_pred EEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCC---CEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcc
Confidence 99999998877 88999999999999999999999987 89999998765443332 3577889999999987 4
Q ss_pred eEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCC
Q 014755 191 AIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGP 269 (419)
Q Consensus 191 ~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~ 269 (419)
.+++ ++.|+.|++||+ +++....+..|.. .|++++|+|++++|++++.|++|++||+.+++.+..+.
T Consensus 533 ~l~s--~s~d~~v~vwd~~~~~~~~~~~~h~~--~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~-------- 600 (694)
T 3dm0_A 533 TIVS--ASWDKTVKVWNLSNCKLRSTLAGHTG--YVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE-------- 600 (694)
T ss_dssp EEEE--EETTSCEEEEETTTCCEEEEECCCSS--CEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB--------
T ss_pred eEEE--EeCCCeEEEEECCCCcEEEEEcCCCC--CEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec--------
Confidence 5666 677999999999 7777788877766 89999999999999999999999999999988776553
Q ss_pred CccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEE
Q 014755 270 CFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYIC 349 (419)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 349 (419)
+...|.+++|+|++.+++
T Consensus 601 --------------------------------------------------------------~~~~v~~~~~sp~~~~l~ 618 (694)
T 3dm0_A 601 --------------------------------------------------------------ANSVIHALCFSPNRYWLC 618 (694)
T ss_dssp --------------------------------------------------------------CSSCEEEEEECSSSSEEE
T ss_pred --------------------------------------------------------------CCCcEEEEEEcCCCcEEE
Confidence 223488999999999988
Q ss_pred EecCCCCceEEEeeccCCCceeecc-c-------------------CCCeeEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 350 TRNDSMPTTLWIWDICRQEPAAILV-Q-------------------KDPIRAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 350 ~~~~d~~~~i~iwd~~~~~~~~~~~-~-------------------~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
+++. +.|+|||+.+++++..+. + ...+++++|+|+|++|++++.||+|++|++.
T Consensus 619 ~~~~---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 619 AATE---HGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEET---TEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEcC---CCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 8775 679999999987665432 1 1137899999999999999999999999985
No 52
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.7e-41 Score=306.70 Aligned_cols=311 Identities=12% Similarity=0.177 Sum_probs=262.2
Q ss_pred cccccC--eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcc
Q 014755 7 YKQTGP--SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEW 82 (419)
Q Consensus 7 ~~~~~~--~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~ 82 (419)
.+|... .++++++++|++|+ |+.|++||+.+++.+..+. |.+.|.+++|+|++ .|++++.| |+|++||+++++.
T Consensus 118 ~~h~~~v~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~d-g~i~vwd~~~~~~ 195 (464)
T 3v7d_B 118 RGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTD-RTVRVWDIKKGCC 195 (464)
T ss_dssp ECCSSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETT-SCEEEEETTTTEE
T ss_pred cCCCCCcEEEEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCC-CCEEEEECCCCcE
Confidence 466665 35677889999998 8899999999999888765 99999999999988 88888876 8999999999999
Q ss_pred eeeeecCCccEeEEEEC--CCCCEEEEEecCCCeEEEEEcCCCeEE------------------------EeccCCCCee
Q 014755 83 TCKIDEGLAGIAYARWS--PDSRHILTTSDFQLRLTVWSLLNTACV------------------------HVQSPKHASK 136 (419)
Q Consensus 83 ~~~~~~~~~~v~~~~~~--~~~~~l~~~~~~~~~i~iwd~~~~~~~------------------------~~~~~~~~~~ 136 (419)
+..+..|...|.+++|+ ++++++++++.++ .|++||++++... .+..+...+.
T Consensus 196 ~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~-~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 274 (464)
T 3v7d_B 196 THVFEGHNSTVRCLDIVEYKNIKYIVTGSRDN-TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVR 274 (464)
T ss_dssp EEEECCCSSCEEEEEEEESSSCEEEEEEETTS-CEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEE
T ss_pred EEEECCCCCccEEEEEecCCCCCEEEEEcCCC-cEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEE
Confidence 99999999999999998 5788999999988 9999999876522 2445555555
Q ss_pred eEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEE
Q 014755 137 GVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLK 215 (419)
Q Consensus 137 ~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~ 215 (419)
++ +++++++++++.| +.|++||+++++.+..+..|...+.+++|+|+++.+++ ++.|+.|++||+ +++.+..
T Consensus 275 ~~--~~~~~~l~~~~~d---~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s--g~~dg~i~vwd~~~~~~~~~ 347 (464)
T 3v7d_B 275 TV--SGHGNIVVSGSYD---NTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCIS--ASMDTTIRIWDLENGELMYT 347 (464)
T ss_dssp EE--EEETTEEEEEETT---SCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEE--EETTSCEEEEETTTTEEEEE
T ss_pred EE--cCCCCEEEEEeCC---CeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEE--EeCCCcEEEEECCCCcEEEE
Confidence 54 6889999999987 89999999999999999999999999999999999998 677999999999 8888888
Q ss_pred EeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCcc
Q 014755 216 YQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDF 295 (419)
Q Consensus 216 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (419)
+..|.. .|.+++|+ +++|++++.||.|++||+.+++......
T Consensus 348 ~~~h~~--~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~---------------------------------- 389 (464)
T 3v7d_B 348 LQGHTA--LVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH---------------------------------- 389 (464)
T ss_dssp ECCCSS--CEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE----------------------------------
T ss_pred EeCCCC--cEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeec----------------------------------
Confidence 887766 89999997 5799999999999999998876544432
Q ss_pred ccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceee--c
Q 014755 296 IQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAI--L 373 (419)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~--~ 373 (419)
+...+..++|+|+++++++++ | +.|++||+.+++++.. .
T Consensus 390 ------------------------------------~~~~~~~~~~~~~~~~l~~~~-d--g~i~iwd~~~g~~~~~~~~ 430 (464)
T 3v7d_B 390 ------------------------------------HTNLSAITTFYVSDNILVSGS-E--NQFNIYNLRSGKLVHANIL 430 (464)
T ss_dssp ------------------------------------CTTCCCEEEEEECSSEEEEEE-T--TEEEEEETTTCCEEESCTT
T ss_pred ------------------------------------CCCCccEEEEEeCCCEEEEec-C--CeEEEEECCCCcEEehhhc
Confidence 233356789999999999998 6 9999999999998864 3
Q ss_pred ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeec
Q 014755 374 VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTP 405 (419)
Q Consensus 374 ~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 405 (419)
+|...|++++|+ +..++++++.||.+.+|-+
T Consensus 431 ~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~~l 461 (464)
T 3v7d_B 431 KDADQIWSVNFK-GKTLVAAVEKDGQSFLEIL 461 (464)
T ss_dssp TTCSEEEEEEEE-TTEEEEEEEETTEEEEEEE
T ss_pred cCCCcEEEEEec-CCEEEEEEEeCCeEEEEEe
Confidence 699999999997 3445566667776665543
No 53
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-42 Score=312.62 Aligned_cols=328 Identities=10% Similarity=0.135 Sum_probs=257.2
Q ss_pred eEEcCCCCEEEEEeCCeEEEEecCCCcEEEEe--ecCcceeEEEEec-CCCeEEEEeccCCeEEEEEccC---Cc---ce
Q 014755 13 SCFSPNARYIAVAVDYRLVVRDAHSFKVVQLF--SCLDKISYIEWAL-DSEYILCGLYKRLMIQAWSLTQ---PE---WT 83 (419)
Q Consensus 13 ~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~--~~~~~v~~~~~s~-~~~~l~~~~~~~g~i~iw~~~~---~~---~~ 83 (419)
..|+|+++.+++++ .|+. +++.+..+ +|.+.|.+++|+| ++++|++++.| |+|++||+.+ +. ..
T Consensus 33 ~~f~~~~~~~~~~~-----~w~~-~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~d-g~v~vwd~~~~~~~~~~~~~ 105 (437)
T 3gre_A 33 KEFGPIQEIVRSPN-----MGNL-RGKLIATLMENEPNSITSSAVSPGETPYLITGSDQ-GVIKIWNLKEIIVGEVYSSS 105 (437)
T ss_dssp GGGCCCCCCCCCCC-----GGGC-CCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETT-SEEEEEEHHHHHTTCCCSCS
T ss_pred hhcCCccccccccc-----cccc-cceEEeeeccCCCCceEEEEECCCCCCEEEEecCC-ceEEEeECcccccCccccee
Confidence 45889998888776 4874 45666555 4789999999999 99999999977 8999999976 43 22
Q ss_pred eeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcC---CCeEEE-ec----------c--CCCCeeeEE--EccCCC
Q 014755 84 CKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLL---NTACVH-VQ----------S--PKHASKGVA--FTQDGK 145 (419)
Q Consensus 84 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~---~~~~~~-~~----------~--~~~~~~~~~--~~~~~~ 145 (419)
..+ .|...|.+++|+|++++|++++.|+ .|++||++ .++... .. . +...+.++. +++++.
T Consensus 106 ~~~-~h~~~v~~~~~~~~~~~l~s~s~dg-~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (437)
T 3gre_A 106 LTY-DCSSTVTQITMIPNFDAFAVSSKDG-QIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKS 183 (437)
T ss_dssp EEE-ECSSCEEEEEECTTSSEEEEEETTS-EEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCE
T ss_pred eec-cCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCC
Confidence 222 5889999999999999999999988 99999995 343322 11 1 445556666 568899
Q ss_pred EEEEEeecCCCCeEEEEeccCCeEEEEEec--cccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCC
Q 014755 146 FAAICTRRDCKDYINLLSCHTWEIMGVFAV--DTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESG 222 (419)
Q Consensus 146 ~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~ 222 (419)
++++++.+ +.|++||+++++.+..+.. |...|.+++|+|+++++++ ++.|+.|++||+ .++.+..+... +.
T Consensus 184 ~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s--~~~dg~i~iwd~~~~~~~~~~~~~-~~ 257 (437)
T 3gre_A 184 LLVALTNL---SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLIL--GTTRGIIDIWDIRFNVLIRSWSFG-DH 257 (437)
T ss_dssp EEEEEETT---SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEE--EETTSCEEEEETTTTEEEEEEBCT-TC
T ss_pred EEEEEeCC---CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEE--EcCCCeEEEEEcCCccEEEEEecC-CC
Confidence 99999987 8999999999999999988 7899999999999999998 677999999999 77777777522 22
Q ss_pred CceeEEEEc----cCCCeEEEEEecCcEEEEEcCCceeeeeec-ccccccCCCccceeccCCCcccccceeeeccCcccc
Q 014755 223 LGVKSISWS----PCGQFLAVGSYDQTLRVLNHLTWKTFAEFM-HLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQ 297 (419)
Q Consensus 223 ~~v~~~~~s----~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (419)
..|.+++|+ |++++|++++.|+.|++||+.+++++..+. +...+. .+.|++... .+
T Consensus 258 ~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~----~~~~~~~~~----~l----------- 318 (437)
T 3gre_A 258 APITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPS----MEHFLPIEK----GL----------- 318 (437)
T ss_dssp EEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCC----GGGGSCBCS----SG-----------
T ss_pred CceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCc----cceeccccc----cc-----------
Confidence 379999665 468899999999999999999999888876 433321 122332110 00
Q ss_pred ccccccCCceEEEEEeccCCCCCCCCCCCCCCC--CCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec-c
Q 014755 298 GNSDATNGHIKVRYEVMEIPISLPFQKPPTDKP--NPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL-V 374 (419)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~-~ 374 (419)
....+. .|...|++++|+ ++++|++++.| +.|++||+.+++....+ +
T Consensus 319 ---------------------------~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d--~~i~~wd~~~~~~~~~~~~ 368 (437)
T 3gre_A 319 ---------------------------EELNFCGIRSLNALSTISVS-NDKILLTDEAT--SSIVMFSLNELSSSKAVIS 368 (437)
T ss_dssp ---------------------------GGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGG--TEEEEEETTCGGGCEEEEC
T ss_pred ---------------------------ccceecccccCCceEEEEEC-CceEEEecCCC--CeEEEEECCCcccceEEec
Confidence 000012 388889999999 88999999999 99999999988765443 2
Q ss_pred -------------------------------------cCCCeeEEEeCCC--CCeEEEEeCCCcEEEee
Q 014755 375 -------------------------------------QKDPIRAATWDPT--CTRLVLCTGSSHLYMWT 404 (419)
Q Consensus 375 -------------------------------------~~~~v~~~~~s~~--~~~l~s~~~dg~i~vw~ 404 (419)
|...|++++|+++ +.+|++++.||.|+||+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 369 PSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp C--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 8899999999998 77999999999999995
No 54
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.1e-40 Score=290.97 Aligned_cols=290 Identities=14% Similarity=0.206 Sum_probs=242.8
Q ss_pred hcccccC---eEEcCC-CCEEEEEe-CCeEEEEecCCCc-----EEE-EeecCcceeEEEEecCCCeEEEEeccCCeEEE
Q 014755 6 AYKQTGP---SCFSPN-ARYIAVAV-DYRLVVRDAHSFK-----VVQ-LFSCLDKISYIEWALDSEYILCGLYKRLMIQA 74 (419)
Q Consensus 6 ~~~~~~~---~~~s~d-~~~la~~~-~~~i~i~~~~~~~-----~~~-~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~i 74 (419)
+.||.+. |+|+|+ +++||+|+ |++|+|||+.+.+ +.. ..+|...|.+++|+|++++|++++.| +.|++
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d-~~i~~ 112 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD-GTLRL 112 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETT-SEEEE
T ss_pred ECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccc-ccceE
Confidence 4578776 799997 68999998 8999999987654 233 34589999999999999999999977 89999
Q ss_pred EEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE--eccCCCCeeeEEEccCC--CEEEEE
Q 014755 75 WSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH--VQSPKHASKGVAFTQDG--KFAAIC 150 (419)
Q Consensus 75 w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~--~~l~~~ 150 (419)
|+............+...+..+.++++++.+++++.|+ .+++||+....... ...+...+..++|++++ .+++++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~-~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~ 191 (340)
T 4aow_A 113 WDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK-TIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSC 191 (340)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTS-CEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEE
T ss_pred EeecccceeeeecCCCCceeEEEEeecCccceeecCCC-eEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEE
Confidence 99999988888888888999999999999999999988 99999998766555 56677888999998876 456777
Q ss_pred eecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEE
Q 014755 151 TRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSIS 229 (419)
Q Consensus 151 ~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~ 229 (419)
+.| +.|++||+++++.+..+..|...|.+++|+|+++++++ ++.|+.|++||+ +++.+..+..+. .+.++.
T Consensus 192 ~~d---~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s--~s~Dg~i~iwd~~~~~~~~~~~~~~---~v~~~~ 263 (340)
T 4aow_A 192 GWD---KLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCAS--GGKDGQAMLWDLNEGKHLYTLDGGD---IINALC 263 (340)
T ss_dssp ETT---SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE--EETTCEEEEEETTTTEEEEEEECSS---CEEEEE
T ss_pred cCC---CEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEE--EeCCCeEEEEEeccCceeeeecCCc---eEEeee
Confidence 766 79999999999999999999999999999999999998 677999999999 777777776543 699999
Q ss_pred EccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEE
Q 014755 230 WSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKV 309 (419)
Q Consensus 230 ~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (419)
|+|++. +++++.|+.|++||++++..+..+......
T Consensus 264 ~~~~~~-~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~------------------------------------------- 299 (340)
T 4aow_A 264 FSPNRY-WLCAATGPSIKIWDLEGKIIVDELKQEVIS------------------------------------------- 299 (340)
T ss_dssp ECSSSS-EEEEEETTEEEEEETTTTEEEEEECCC----------------------------------------------
T ss_pred cCCCCc-eeeccCCCEEEEEECCCCeEEEecccccee-------------------------------------------
Confidence 999875 556677999999999988877776522111
Q ss_pred EEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCC
Q 014755 310 RYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQE 368 (419)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~ 368 (419)
....+|...|++++|+|||++|++|+.| |.|+|||+++|+
T Consensus 300 -----------------~~~~~h~~~v~~l~~s~dg~~l~sgs~D--g~v~iW~~~tGt 339 (340)
T 4aow_A 300 -----------------TSSKAEPPQCTSLAWSADGQTLFAGYTD--NLVRVWQVTIGT 339 (340)
T ss_dssp ---------------------CCCCCEEEEEECTTSSEEEEEETT--SCEEEEEEEC--
T ss_pred -----------------eeccCCCCCEEEEEECCCCCEEEEEeCC--CEEEEEeCCCcC
Confidence 0122588889999999999999999999 999999999875
No 55
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1e-40 Score=290.79 Aligned_cols=276 Identities=14% Similarity=0.139 Sum_probs=238.0
Q ss_pred ccccC---eEEcCCCCEEEEEeCCeEEEEecCCCcEE---EE---eecCcceeEEEEecCCCeEEEEeccCCeEEEEEcc
Q 014755 8 KQTGP---SCFSPNARYIAVAVDYRLVVRDAHSFKVV---QL---FSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLT 78 (419)
Q Consensus 8 ~~~~~---~~~s~d~~~la~~~~~~i~i~~~~~~~~~---~~---~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~ 78 (419)
+|... ++|+|++++|++++++.|++||+.+++.. .. ..|...|.+++|+|++++|++++.+ |.|++||+.
T Consensus 49 ~h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~~~d~~ 127 (337)
T 1gxr_A 49 NHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA-STLSIWDLA 127 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESS-SEEEEEECC
T ss_pred cCCCceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCC-CcEEEEECC
Confidence 45444 89999999999999999999999876532 22 1588999999999999999999976 899999999
Q ss_pred CCc--ceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCC
Q 014755 79 QPE--WTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDC 155 (419)
Q Consensus 79 ~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 155 (419)
+++ ....+..|...+.+++|+|+++++++++.++ .|++||+++++... +..+...+.+++|+|+++++++++.+
T Consensus 128 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-- 204 (337)
T 1gxr_A 128 APTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG-NIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLD-- 204 (337)
T ss_dssp CC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTS-CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT--
T ss_pred CCCcceeeecccCCCceEEEEECCCCCEEEEEeCCC-cEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecC--
Confidence 887 5566778889999999999999999999887 99999999998877 77788999999999999999999886
Q ss_pred CCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCC
Q 014755 156 KDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQ 235 (419)
Q Consensus 156 ~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 235 (419)
+.|++||+++++.+..+. +...+.+++|+|+++.+++ +..++.|++||+.......+..+.. .+.+++|+|+++
T Consensus 205 -g~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~--~~~~~~i~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~ 278 (337)
T 1gxr_A 205 -NTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAV--GMESSNVEVLHVNKPDKYQLHLHES--CVLSLKFAYCGK 278 (337)
T ss_dssp -SEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEE--EETTSCEEEEETTSSCEEEECCCSS--CEEEEEECTTSS
T ss_pred -CcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEE--EcCCCcEEEEECCCCCeEEEcCCcc--ceeEEEECCCCC
Confidence 899999999998887765 5678999999999999998 5668999999994444455555544 899999999999
Q ss_pred eEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEecc
Q 014755 236 FLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVME 315 (419)
Q Consensus 236 ~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (419)
+|++++.|+.|++||+.+++.+....
T Consensus 279 ~l~~~~~dg~i~~~~~~~~~~~~~~~------------------------------------------------------ 304 (337)
T 1gxr_A 279 WFVSTGKDNLLNAWRTPYGASIFQSK------------------------------------------------------ 304 (337)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEE------------------------------------------------------
T ss_pred EEEEecCCCcEEEEECCCCeEEEEec------------------------------------------------------
Confidence 99999999999999999887664432
Q ss_pred CCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeecc
Q 014755 316 IPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDIC 365 (419)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~ 365 (419)
|...|.+++|+|++++|++++.| |.|++|++.
T Consensus 305 ----------------~~~~v~~~~~s~~~~~l~~~~~d--g~i~iw~~~ 336 (337)
T 1gxr_A 305 ----------------ESSSVLSCDISVDDKYIVTGSGD--KKATVYEVI 336 (337)
T ss_dssp ----------------CSSCEEEEEECTTSCEEEEEETT--SCEEEEEEE
T ss_pred ----------------CCCcEEEEEECCCCCEEEEecCC--CeEEEEEEe
Confidence 45568999999999999999999 999999963
No 56
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-41 Score=303.64 Aligned_cols=298 Identities=16% Similarity=0.215 Sum_probs=244.0
Q ss_pred EEEEecCCCcE-EEEeecCcceeEEEEecCCC-eEEEEeccCCeEEEEEc----cCCc------ceeeeec---------
Q 014755 30 LVVRDAHSFKV-VQLFSCLDKISYIEWALDSE-YILCGLYKRLMIQAWSL----TQPE------WTCKIDE--------- 88 (419)
Q Consensus 30 i~i~~~~~~~~-~~~~~~~~~v~~~~~s~~~~-~l~~~~~~~g~i~iw~~----~~~~------~~~~~~~--------- 88 (419)
+.+|+.+.... +....|.+.|.+++|+|+++ +|++++.| |.|++|++ .+++ ....+..
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d-g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (425)
T 1r5m_A 27 DSSDDLDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKN-SVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSG 105 (425)
T ss_dssp -------CCCEECEEEEECSCCSEEEECSSCTTEEEEEETB-TEEEEEEEEEC------CEEEEEEEEEECCCCCC----
T ss_pred cccccchhhhhheeeeeccCceEEEEECCCCCcEEEEecCC-ceEEEEEEecccCCcccccccccccccccccccccccc
Confidence 45677765443 33445779999999999999 99999977 89999999 8887 3444444
Q ss_pred -CCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCC
Q 014755 89 -GLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTW 167 (419)
Q Consensus 89 -~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~ 167 (419)
|...|.+++|+|++++|++++.++ .|++||........+..|...+.+++|+|++++|++++.+ +.|++||++++
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg-~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~ 181 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENG-ELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVE---NVTILWNVISG 181 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTS-CEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETT---CCEEEEETTTT
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCC-eEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecC---CeEEEEECCCC
Confidence 577999999999999999999987 9999995444444488899999999999999999999886 89999999999
Q ss_pred eEEEEEeccccc---------------eeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEc
Q 014755 168 EIMGVFAVDTLD---------------LADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWS 231 (419)
Q Consensus 168 ~~~~~~~~~~~~---------------v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s 231 (419)
+.+..+..+... +.++.|+|++. +++ +..++.|++||+ +++.+..+..+.. .|.+++|+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~g~i~~~d~~~~~~~~~~~~~~~--~i~~~~~~ 256 (425)
T 1r5m_A 182 TVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVI--PGPKGAIFVYQITEKTPTGKLIGHHG--PISVLEFN 256 (425)
T ss_dssp EEEEEECCC---------------CCCBSCCEEEETTE-EEE--ECGGGCEEEEETTCSSCSEEECCCSS--CEEEEEEE
T ss_pred cEEEEeeccccCccceeeccccCCcceeeEEEEcCCCE-EEE--EcCCCeEEEEEcCCCceeeeeccCCC--ceEEEEEC
Confidence 999888887766 99999999876 444 466899999999 7777777776655 89999999
Q ss_pred cCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEE
Q 014755 232 PCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRY 311 (419)
Q Consensus 232 ~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (419)
|++++|++++.|+.|++||+.+++.+..+.
T Consensus 257 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-------------------------------------------------- 286 (425)
T 1r5m_A 257 DTNKLLLSASDDGTLRIWHGGNGNSQNCFY-------------------------------------------------- 286 (425)
T ss_dssp TTTTEEEEEETTSCEEEECSSSBSCSEEEC--------------------------------------------------
T ss_pred CCCCEEEEEcCCCEEEEEECCCCccceEec--------------------------------------------------
Confidence 999999999999999999998877655543
Q ss_pred EeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec-ccCCCeeEEEeCCCCCe
Q 014755 312 EVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL-VQKDPIRAATWDPTCTR 390 (419)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~~ 390 (419)
.|...|.+++|+|++ ++++++.| +.|++||+.++++...+ .|...|.+++|+|++++
T Consensus 287 -------------------~~~~~i~~~~~~~~~-~l~~~~~d--~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 344 (425)
T 1r5m_A 287 -------------------GHSQSIVSASWVGDD-KVISCSMD--GSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQK 344 (425)
T ss_dssp -------------------CCSSCEEEEEEETTT-EEEEEETT--SEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSE
T ss_pred -------------------CCCccEEEEEECCCC-EEEEEeCC--CcEEEEECCCCcEeEecccCCccEEEEEEcCCCCE
Confidence 366679999999999 99999998 99999999998877766 48999999999999999
Q ss_pred EEEEeCCCcEEEeecCCCe
Q 014755 391 LVLCTGSSHLYMWTPSGAY 409 (419)
Q Consensus 391 l~s~~~dg~i~vw~~~~~~ 409 (419)
|++++.||.|++|++.+++
T Consensus 345 l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 345 YAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp EEEEETTSCEEEEECHHHH
T ss_pred EEEEECCCeEEEEECCCCc
Confidence 9999999999999998665
No 57
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.9e-41 Score=296.36 Aligned_cols=290 Identities=11% Similarity=0.107 Sum_probs=221.3
Q ss_pred eecCcceeEEEEecCCCeEEEEeccC------CeEEEEEccCCcce----------eeeecCCccEeEEEECCCCCEEEE
Q 014755 44 FSCLDKISYIEWALDSEYILCGLYKR------LMIQAWSLTQPEWT----------CKIDEGLAGIAYARWSPDSRHILT 107 (419)
Q Consensus 44 ~~~~~~v~~~~~s~~~~~l~~~~~~~------g~i~iw~~~~~~~~----------~~~~~~~~~v~~~~~~~~~~~l~~ 107 (419)
+....||++++|+|||++|++|+.+. +.|++|++..+... ..+..|...+.++++ ++..+++
T Consensus 11 ~~~g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~--~~~~~~~ 88 (365)
T 4h5i_A 11 YNVGYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDA--SKGIILV 88 (365)
T ss_dssp EECSSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEE--ETTEEEE
T ss_pred cCCCCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEe--CCCEEEE
Confidence 33456899999999999999987542 25999998765321 134566777877766 4566776
Q ss_pred EecC----------CCeEEEEEcCCCe--EEE---e-----ccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCC
Q 014755 108 TSDF----------QLRLTVWSLLNTA--CVH---V-----QSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTW 167 (419)
Q Consensus 108 ~~~~----------~~~i~iwd~~~~~--~~~---~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~ 167 (419)
+..+ ++.+++|++.... ... . ..+...+.+++|+|||+++++++.+ .++.|++||++++
T Consensus 89 g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~-~d~~i~iwd~~~~ 167 (365)
T 4h5i_A 89 GCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSK-VPAIMRIIDPSDL 167 (365)
T ss_dssp ECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESC-SSCEEEEEETTTT
T ss_pred EECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECC-CCCEEEEeECCCC
Confidence 5422 2389999987632 111 1 1223346899999999999877642 1389999999999
Q ss_pred eEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecC--
Q 014755 168 EIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQ-- 244 (419)
Q Consensus 168 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~-- 244 (419)
+.+..+. |...|.+++|+|||+++++ ++ ++.+.+|+. +++.+.......+...+.+++|+|+++++++++.|+
T Consensus 168 ~~~~~~~-~~~~V~~v~fspdg~~l~s--~s-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~ 243 (365)
T 4h5i_A 168 TEKFEIE-TRGEVKDLHFSTDGKVVAY--IT-GSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGK 243 (365)
T ss_dssp EEEEEEE-CSSCCCEEEECTTSSEEEE--EC-SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSC
T ss_pred cEEEEeC-CCCceEEEEEccCCceEEe--cc-ceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcc
Confidence 9988876 6678999999999999988 44 445555555 777766655555555899999999999999999887
Q ss_pred --cEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCC
Q 014755 245 --TLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPF 322 (419)
Q Consensus 245 --~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (419)
.+++|++...........
T Consensus 244 ~~~i~~~~~~~~~~~~~~~~------------------------------------------------------------ 263 (365)
T 4h5i_A 244 GIVLTKISIKSGNTSVLRSK------------------------------------------------------------ 263 (365)
T ss_dssp CEEEEEEEEETTEEEEEEEE------------------------------------------------------------
T ss_pred eeEEeecccccceecceeee------------------------------------------------------------
Confidence 588888765543211100
Q ss_pred CCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceee-c-ccCCCeeEEEeCCCCCeEEEEeCCCcE
Q 014755 323 QKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAI-L-VQKDPIRAATWDPTCTRLVLCTGSSHL 400 (419)
Q Consensus 323 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~-~-~~~~~v~~~~~s~~~~~l~s~~~dg~i 400 (419)
.+.+|...|++++|||||++||+|+.| ++|+|||+++++++.. + +|..+|++++|||||++|||+|.|++|
T Consensus 264 -----~~~~~~~~V~~~~~Spdg~~lasgs~D--~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tv 336 (365)
T 4h5i_A 264 -----QVTNRFKGITSMDVDMKGELAVLASND--NSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTI 336 (365)
T ss_dssp -----EEESSCSCEEEEEECTTSCEEEEEETT--SCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEE
T ss_pred -----eecCCCCCeEeEEECCCCCceEEEcCC--CEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeE
Confidence 011477789999999999999999999 9999999999998765 3 599999999999999999999999999
Q ss_pred EEeecCC
Q 014755 401 YMWTPSG 407 (419)
Q Consensus 401 ~vw~~~~ 407 (419)
+||++..
T Consensus 337 rvw~ip~ 343 (365)
T 4h5i_A 337 HIIKLPL 343 (365)
T ss_dssp EEEECCT
T ss_pred EEEEcCC
Confidence 9999964
No 58
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.7e-41 Score=296.98 Aligned_cols=292 Identities=12% Similarity=0.098 Sum_probs=234.5
Q ss_pred eecCcceeEEEEecCCCeEEEEecc---CCeEEEEEccCCcceee-eecCCccEeEEEECCC---CCEEEEEecCCCeEE
Q 014755 44 FSCLDKISYIEWALDSEYILCGLYK---RLMIQAWSLTQPEWTCK-IDEGLAGIAYARWSPD---SRHILTTSDFQLRLT 116 (419)
Q Consensus 44 ~~~~~~v~~~~~s~~~~~l~~~~~~---~g~i~iw~~~~~~~~~~-~~~~~~~v~~~~~~~~---~~~l~~~~~~~~~i~ 116 (419)
.+|...|.+++|+|+++.+++++.. +|.|++||+.+++.... ...|...|.+++|+|+ +++|++++.++ .|+
T Consensus 15 ~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg-~i~ 93 (357)
T 3i2n_A 15 KGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGG-NLH 93 (357)
T ss_dssp EECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTS-CEE
T ss_pred cCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCC-eEE
Confidence 3499999999999999766654432 58999999998876544 3378889999999998 69999999887 999
Q ss_pred EEEcCCCe-EEE-eccCCCCeeeEE------EccCCCEEEEEeecCCCCeEEEEeccCCe-EEEEEecccc----ceeee
Q 014755 117 VWSLLNTA-CVH-VQSPKHASKGVA------FTQDGKFAAICTRRDCKDYINLLSCHTWE-IMGVFAVDTL----DLADI 183 (419)
Q Consensus 117 iwd~~~~~-~~~-~~~~~~~~~~~~------~~~~~~~l~~~~~~~~~g~v~i~d~~~~~-~~~~~~~~~~----~v~~~ 183 (419)
+||+.+++ ... +..|...+.++. |+|++++|++++.+ +.|++||+++++ .+..+..+.. .+.++
T Consensus 94 iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d---~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~ 170 (357)
T 3i2n_A 94 IWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRD---GTVKVWDPRQKDDPVANMEPVQGENKRDCWTV 170 (357)
T ss_dssp EECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETT---SCEEEECTTSCSSCSEEECCCTTSCCCCEEEE
T ss_pred EEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCC---CeEEEEeCCCCCCcceeccccCCCCCCceEEE
Confidence 99999876 444 788999999995 57899999999987 899999999876 6677765544 78888
Q ss_pred e----ECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEcc---CCCeEEEEEecCcEEEEEcCCce
Q 014755 184 E----WSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSP---CGQFLAVGSYDQTLRVLNHLTWK 255 (419)
Q Consensus 184 ~----~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~~~~~d~~i~v~d~~~~~ 255 (419)
+ |+|+++++++ +..++.|++||+ +++. .....+.. .+.+++|+| ++++|++++.|+.|++||+++++
T Consensus 171 ~~~~~~~~~~~~l~~--~~~d~~i~i~d~~~~~~-~~~~~~~~--~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 245 (357)
T 3i2n_A 171 AFGNAYNQEERVVCA--GYDNGDIKLFDLRNMAL-RWETNIKN--GVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQH 245 (357)
T ss_dssp EEECCCC-CCCEEEE--EETTSEEEEEETTTTEE-EEEEECSS--CEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEE
T ss_pred EEEeccCCCCCEEEE--EccCCeEEEEECccCce-eeecCCCC--ceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCC
Confidence 7 7899999998 566899999999 5544 34444444 899999999 89999999999999999998776
Q ss_pred eeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcc
Q 014755 256 TFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQG 335 (419)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (419)
.+..+.... ..+|...
T Consensus 246 ~~~~~~~~~----------------------------------------------------------------~~~~~~~ 261 (357)
T 3i2n_A 246 PTKGFASVS----------------------------------------------------------------EKAHKST 261 (357)
T ss_dssp TTTEEEEEE----------------------------------------------------------------EECCSSC
T ss_pred cccceeeec----------------------------------------------------------------cCCCcCC
Confidence 554432000 1147788
Q ss_pred eEEEEEccCCe-EEEEecCCCCceEEEeeccCCCc-------------------ee-ecccCCCeeEEEeCCCCCeEE-E
Q 014755 336 IGLMSWSSDSQ-YICTRNDSMPTTLWIWDICRQEP-------------------AA-ILVQKDPIRAATWDPTCTRLV-L 393 (419)
Q Consensus 336 v~~~~~s~~g~-~l~~~~~d~~~~i~iwd~~~~~~-------------------~~-~~~~~~~v~~~~~s~~~~~l~-s 393 (419)
|.+++|+|+++ +|++++.| |.|++||+..+.. +. ..+|...|++++|+|++++|+ +
T Consensus 262 v~~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s 339 (357)
T 3i2n_A 262 VWQVRHLPQNRELFLTAGGA--GGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVC 339 (357)
T ss_dssp EEEEEEETTEEEEEEEEETT--SEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEE
T ss_pred EEEEEECCCCCcEEEEEeCC--CcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEE
Confidence 99999999999 89999999 9999999986432 22 235999999999999999998 8
Q ss_pred EeCCCcEEEeecCCCeE
Q 014755 394 CTGSSHLYMWTPSGAYC 410 (419)
Q Consensus 394 ~~~dg~i~vw~~~~~~~ 410 (419)
++.||.|++|++.+.++
T Consensus 340 ~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 340 SSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp EETTSEEEEEEECC---
T ss_pred ecCCCcEEEEECCCccc
Confidence 99999999999987654
No 59
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-40 Score=291.43 Aligned_cols=283 Identities=11% Similarity=0.175 Sum_probs=245.2
Q ss_pred hcccccC---eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC
Q 014755 6 AYKQTGP---SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP 80 (419)
Q Consensus 6 ~~~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~ 80 (419)
..+|... ++|+|++++|++++ ++.|++||+.+++.+..+. |...|.+++|+|++++|++++.| |.|++||+.++
T Consensus 28 l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-g~i~iwd~~~~ 106 (369)
T 3zwl_B 28 LTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSAD-YSIKLWDVSNG 106 (369)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT-TEEEEEETTTC
T ss_pred EEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCC-CeEEEEECCCC
Confidence 3456555 89999999999998 8899999999999888775 89999999999999999999976 89999999999
Q ss_pred cceeeeecCCccEeEEEECCCCCEEEEEecC-----CCeEEEEEcCCCeE------------EEeccCCC--CeeeEEEc
Q 014755 81 EWTCKIDEGLAGIAYARWSPDSRHILTTSDF-----QLRLTVWSLLNTAC------------VHVQSPKH--ASKGVAFT 141 (419)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-----~~~i~iwd~~~~~~------------~~~~~~~~--~~~~~~~~ 141 (419)
+....+. +...+.+++|+|+++++++++.+ + .|++||+..+.. ..+..+.. .+.+++|+
T Consensus 107 ~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g-~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (369)
T 3zwl_B 107 QCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPG-SINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWS 184 (369)
T ss_dssp CEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCC-EEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEEC
T ss_pred cEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCC-EEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEc
Confidence 9887776 88899999999999999999887 6 999999976421 11334444 78999999
Q ss_pred cCCCEEEEEeecCCCCeEEEEeccC-CeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeec
Q 014755 142 QDGKFAAICTRRDCKDYINLLSCHT-WEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAY 219 (419)
Q Consensus 142 ~~~~~l~~~~~~~~~g~v~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~ 219 (419)
|+++++++++.+ |.|++||+++ .+.+..+..|...+.+++|+|+++++++ ++.++.|++||+ +++.+..+...
T Consensus 185 ~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~d~~i~v~d~~~~~~~~~~~~~ 259 (369)
T 3zwl_B 185 TKGKYIIAGHKD---GKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFIT--SSRDTNSFLVDVSTLQVLKKYETD 259 (369)
T ss_dssp GGGCEEEEEETT---SEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEE--EETTSEEEEEETTTCCEEEEEECS
T ss_pred CCCCEEEEEcCC---CEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEE--ecCCceEEEEECCCCceeeeecCC
Confidence 999999999886 8999999999 7888999999999999999999999988 567899999999 77877777632
Q ss_pred CCCCceeEEEEccCCCeEEEEEecC--------------cEEEEEcCCceeeeeecccccccCCCccceeccCCCccccc
Q 014755 220 ESGLGVKSISWSPCGQFLAVGSYDQ--------------TLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLD 285 (419)
Q Consensus 220 ~~~~~v~~~~~s~~~~~l~~~~~d~--------------~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (419)
. .+.+++|+|+++++++++.++ .+++||..+++.+..+.
T Consensus 260 -~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~------------------------ 312 (369)
T 3zwl_B 260 -C--PLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQ------------------------ 312 (369)
T ss_dssp -S--CEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEE------------------------
T ss_pred -C--CceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhhee------------------------
Confidence 3 799999999999999999888 78888888877666543
Q ss_pred ceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeecc
Q 014755 286 MSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDIC 365 (419)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~ 365 (419)
+|...|.+++|+|++++|++++.| |.|++|+++
T Consensus 313 ---------------------------------------------~~~~~v~~~~~s~~~~~l~s~~~d--g~v~iw~~~ 345 (369)
T 3zwl_B 313 ---------------------------------------------GHFGPLNTVAISPQGTSYASGGED--GFIRLHHFE 345 (369)
T ss_dssp ---------------------------------------------CCSSCEEEEEECTTSSEEEEEETT--SEEEEEEEC
T ss_pred ---------------------------------------------cccCcEEEEEECCCCCEEEEEcCC--CeEEEEECc
Confidence 467779999999999999999999 999999998
Q ss_pred CCCce
Q 014755 366 RQEPA 370 (419)
Q Consensus 366 ~~~~~ 370 (419)
++...
T Consensus 346 ~~~~~ 350 (369)
T 3zwl_B 346 KSYFD 350 (369)
T ss_dssp HHHHT
T ss_pred cccch
Confidence 76543
No 60
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=4.4e-40 Score=295.21 Aligned_cols=281 Identities=20% Similarity=0.284 Sum_probs=240.5
Q ss_pred cCeEEcCCCCEEEEEeCCeEEEEecCCCcEEEEee---cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeee
Q 014755 11 GPSCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFS---CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKID 87 (419)
Q Consensus 11 ~~~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~ 87 (419)
+.|+||++ ++||+|.|++|+|||..++++.+.+. |...|++++|+|+|++|++|+.| |+|+|||+++++.+..+.
T Consensus 109 ~~l~wS~~-n~lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D-g~v~iWd~~~~~~~~~~~ 186 (420)
T 4gga_A 109 NLVDWSSG-NVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS-AEVQLWDVQQQKRLRNMT 186 (420)
T ss_dssp BCEEECTT-SEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT-SCEEEEETTTTEEEEEEC
T ss_pred eeEEECCC-CEEEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECC-CeEEEEEcCCCcEEEEEe
Confidence 34899986 58999999999999999999887654 67789999999999999999977 899999999999999999
Q ss_pred cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEE-E-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEecc
Q 014755 88 EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACV-H-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCH 165 (419)
Q Consensus 88 ~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~-~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~ 165 (419)
+|...+.++.+ ++..+++++.++ .+++||....... . +..|...+..+.++|+++++++++.| +.+++|+..
T Consensus 187 ~h~~~v~~~s~--~~~~l~sgs~d~-~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D---~~v~i~~~~ 260 (420)
T 4gga_A 187 SHSARVGSLSW--NSYILSSGSRSG-HIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGND---NLVNVWPSA 260 (420)
T ss_dssp CCSSCEEEEEE--ETTEEEEEETTS-EEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT---SCEEEEESS
T ss_pred CCCCceEEEee--CCCEEEEEeCCC-ceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeecc---ccceEEeec
Confidence 99999998877 567899999887 9999999874333 3 78899999999999999999999987 899999998
Q ss_pred CCe----EEEEEeccccceeeeeECCCCCeE-EEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEE
Q 014755 166 TWE----IMGVFAVDTLDLADIEWSPDDSAI-VIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAV 239 (419)
Q Consensus 166 ~~~----~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 239 (419)
+++ .+.....|...|.+++|+|++..+ ++..++.|+.|++||+ +++....+..+. .+.++.|+|+++.+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~---~v~~~~~~~~~~~lv~ 337 (420)
T 4gga_A 261 PGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS---QVCSILWSPHYKELIS 337 (420)
T ss_dssp CCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSS---CEEEEEEETTTTEEEE
T ss_pred cccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecccc---ceeeeeecCCCCeEEE
Confidence 754 345667788999999999977654 4555678999999999 888888777654 6999999999999888
Q ss_pred EE--ecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCC
Q 014755 240 GS--YDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIP 317 (419)
Q Consensus 240 ~~--~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (419)
++ .|+.|+|||+.+++++..+.
T Consensus 338 ~sg~~d~~I~iwd~~~~~~v~~l~-------------------------------------------------------- 361 (420)
T 4gga_A 338 GHGFAQNQLVIWKYPTMAKVAELK-------------------------------------------------------- 361 (420)
T ss_dssp EECTTTCCEEEEETTTCCEEEEEC--------------------------------------------------------
T ss_pred EEecCCCEEEEEECCCCcEEEEEc--------------------------------------------------------
Confidence 76 68999999999988877754
Q ss_pred CCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec
Q 014755 318 ISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL 373 (419)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~ 373 (419)
+|.+.|++++|+|||++||+|+.| ++|+|||+....+....
T Consensus 362 -------------gH~~~V~~l~~spdg~~l~S~s~D--~tvriWdv~~~~~~~~~ 402 (420)
T 4gga_A 362 -------------GHTSRVLSLTMSPDGATVASAAAD--ETLRLWRCFELDPARRR 402 (420)
T ss_dssp -------------CCSSCEEEEEECTTSSCEEEEETT--TEEEEECCSCSSCC---
T ss_pred -------------CCCCCEEEEEEcCCCCEEEEEecC--CeEEEEECCCCCccchh
Confidence 588889999999999999999999 99999999876555443
No 61
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-40 Score=285.35 Aligned_cols=285 Identities=7% Similarity=0.093 Sum_probs=245.3
Q ss_pred cEEEEe-ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEE
Q 014755 39 KVVQLF-SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTV 117 (419)
Q Consensus 39 ~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~i 117 (419)
+....+ +|.+.|.+++| |++++|++++.| |.|++||+.+++....+..|...|.+++|+|+++++++++.++ .+++
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~d-g~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-~i~~ 85 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRD-GTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDT-MING 85 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETT-SEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTS-CEEE
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcC-CcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCC-eEEE
Confidence 444444 59999999999 999999999977 8999999999988888889999999999999999999999988 9999
Q ss_pred EEcCCC---eEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECC-CCCeE
Q 014755 118 WSLLNT---ACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSP-DDSAI 192 (419)
Q Consensus 118 wd~~~~---~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l 192 (419)
|++... +... +..+...+.+++| +++++++++.+ +.|++|| .++....+..|...+.++.|.| ++..+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d---~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l 158 (313)
T 3odt_A 86 VPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWD---KTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKF 158 (313)
T ss_dssp EETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETT---SEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEE
T ss_pred EEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCC---CCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEE
Confidence 998764 3333 7788889999999 57799999887 8999999 6788888999999999999988 88888
Q ss_pred EEEcCCCCceEEEEcCCCceEEEEee-cCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCc
Q 014755 193 VIWDSPLEYKVLIYSPDGRCLLKYQA-YESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCF 271 (419)
Q Consensus 193 ~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~ 271 (419)
++ ++.++.|++|| .++....+.. +.. .+.+++|+|+++ +++++.|+.|++||+++++.+..+.
T Consensus 159 ~~--~~~d~~i~i~d-~~~~~~~~~~~~~~--~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~---------- 222 (313)
T 3odt_A 159 LT--ASADKTIKLWQ-NDKVIKTFSGIHND--VVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYE---------- 222 (313)
T ss_dssp EE--EETTSCEEEEE-TTEEEEEECSSCSS--CEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEE----------
T ss_pred EE--EECCCCEEEEe-cCceEEEEeccCcc--cEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhh----------
Confidence 88 56789999999 4555556654 433 899999999998 9999999999999999888776653
Q ss_pred cceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEe
Q 014755 272 PAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTR 351 (419)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 351 (419)
.|...|.+++|+|++ .|+++
T Consensus 223 -----------------------------------------------------------~~~~~i~~~~~~~~~-~l~~~ 242 (313)
T 3odt_A 223 -----------------------------------------------------------GHESFVYCIKLLPNG-DIVSC 242 (313)
T ss_dssp -----------------------------------------------------------CCSSCEEEEEECTTS-CEEEE
T ss_pred -----------------------------------------------------------cCCceEEEEEEecCC-CEEEE
Confidence 366779999999999 58888
Q ss_pred cCCCCceEEEeeccCCCceeecc-cCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEEe
Q 014755 352 NDSMPTTLWIWDICRQEPAAILV-QKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCVS 412 (419)
Q Consensus 352 ~~d~~~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~ 412 (419)
+.| +.|++||+.++++...+. |...|++++|+|+++ +++++.||.|++|+++++++..
T Consensus 243 ~~d--g~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~ 301 (313)
T 3odt_A 243 GED--RTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWAS 301 (313)
T ss_dssp ETT--SEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC
T ss_pred ecC--CEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceee
Confidence 888 999999999999887764 888999999999998 6679999999999999776543
No 62
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.4e-40 Score=295.23 Aligned_cols=282 Identities=13% Similarity=0.251 Sum_probs=234.2
Q ss_pred eeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeec-CCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-
Q 014755 50 ISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDE-GLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH- 127 (419)
Q Consensus 50 v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~- 127 (419)
+.+++|++ ..+++++.+ |.|++||+.+++....+.. |...|.+++|+|++++|++++.++ .|++||+.+++...
T Consensus 96 ~~~~~~s~--~~l~~~~~d-~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg-~i~iwd~~~~~~~~~ 171 (401)
T 4aez_A 96 LNLLDWSN--LNVVAVALE-RNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNG-LVDIYDVESQTKLRT 171 (401)
T ss_dssp CBCEEECT--TSEEEEEET-TEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTS-CEEEEETTTCCEEEE
T ss_pred EEEEeecC--CCEEEEECC-CeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCC-eEEEEECcCCeEEEE
Confidence 44566664 557777766 8999999999988777665 678899999999999999999887 99999999988777
Q ss_pred eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEecc-CCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEE
Q 014755 128 VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCH-TWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIY 206 (419)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~ 206 (419)
+..|...+.+++| +++++++++.+ |.|++||++ ....+..+..|...|.+++|+|+++.+++ ++.|+.|++|
T Consensus 172 ~~~~~~~v~~~~~--~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s--~~~d~~v~iw 244 (401)
T 4aez_A 172 MAGHQARVGCLSW--NRHVLSSGSRS---GAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLAS--GGNDNVVQIW 244 (401)
T ss_dssp ECCCSSCEEEEEE--ETTEEEEEETT---SEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEE--EETTSCEEEE
T ss_pred ecCCCCceEEEEE--CCCEEEEEcCC---CCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEE--EeCCCeEEEc
Confidence 7789999999999 46799999887 899999999 56778888999999999999999999998 6678999999
Q ss_pred cC-CCceEEEEeecCCCCceeEEEEccCCC-eEEEEE--ecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcc
Q 014755 207 SP-DGRCLLKYQAYESGLGVKSISWSPCGQ-FLAVGS--YDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPL 282 (419)
Q Consensus 207 d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (419)
|+ +++.+..+..+.. .|.+++|+|++. ++++++ .|+.|++||+.+++++..+.
T Consensus 245 d~~~~~~~~~~~~~~~--~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~--------------------- 301 (401)
T 4aez_A 245 DARSSIPKFTKTNHNA--AVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD--------------------- 301 (401)
T ss_dssp ETTCSSEEEEECCCSS--CCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE---------------------
T ss_pred cCCCCCccEEecCCcc--eEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe---------------------
Confidence 99 7778777776655 899999999875 555554 69999999999988877664
Q ss_pred cccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEe--cCCCCceEE
Q 014755 283 QLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTR--NDSMPTTLW 360 (419)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~--~~d~~~~i~ 360 (419)
+...|.+++|+|++++++++ +.| +.|+
T Consensus 302 -------------------------------------------------~~~~v~~~~~s~~~~~l~~~~g~~d--g~i~ 330 (401)
T 4aez_A 302 -------------------------------------------------AGSQVTSLIWSPHSKEIMSTHGFPD--NNLS 330 (401)
T ss_dssp -------------------------------------------------CSSCEEEEEECSSSSEEEEEECTTT--CEEE
T ss_pred -------------------------------------------------CCCcEEEEEECCCCCeEEEEeecCC--CcEE
Confidence 33458999999999999994 467 9999
Q ss_pred EeeccCCCceee---cccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEEecCCC
Q 014755 361 IWDICRQEPAAI---LVQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCVSNPLP 416 (419)
Q Consensus 361 iwd~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~~~ 416 (419)
+||+.+++.... .+|...|++++|+|++++|++++.||.|++|++.+++.+..+.+
T Consensus 331 v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~~~ 389 (401)
T 4aez_A 331 IWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRPIP 389 (401)
T ss_dssp EEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC---------
T ss_pred EEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcccccccc
Confidence 999998765543 36999999999999999999999999999999998887765543
No 63
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2e-41 Score=305.25 Aligned_cols=304 Identities=12% Similarity=0.134 Sum_probs=228.6
Q ss_pred eecCcceeEEEEec-CCCeEEEEeccCCeEEEEEccCCccee--eeecCCccEeEEEECC-CCCEEEEEecCCCeEEEEE
Q 014755 44 FSCLDKISYIEWAL-DSEYILCGLYKRLMIQAWSLTQPEWTC--KIDEGLAGIAYARWSP-DSRHILTTSDFQLRLTVWS 119 (419)
Q Consensus 44 ~~~~~~v~~~~~s~-~~~~l~~~~~~~g~i~iw~~~~~~~~~--~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~i~iwd 119 (419)
..|...|++|+|+| ++++||+|+.| |+|+|||+.+++... .+.+|.+.|.+++|+| ++++|++++.|+ +|++||
T Consensus 116 ~~~~~~V~~l~~~P~~~~~lasGs~d-g~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~-~v~iwd 193 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPSTVAVGSKG-GDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG-TTRLQD 193 (435)
T ss_dssp EECSSCEEEEEECSSCTTCEEEEETT-SCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSS-CEEEEE
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEeCC-CEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCC-EEEEee
Confidence 45888999999999 56789999876 899999998776443 3457999999999998 688999999988 999999
Q ss_pred cCCCeEEEecc---CCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEc
Q 014755 120 LLNTACVHVQS---PKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWD 196 (419)
Q Consensus 120 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 196 (419)
++++....+.. ....+.+++|+|++++|++++.+ |.|++||++. +.+..+..|...|.+++|+|++..+++.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d---g~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s- 268 (435)
T 4e54_B 194 FKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNV---GNVILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLAT- 268 (435)
T ss_dssp TTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSS---SBEEEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEE-
T ss_pred ccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCC---CcEeeeccCc-ceeEEEecccceEEeeeecCCCceEEEE-
Confidence 99876655322 23346899999999999999887 8999999874 5667788899999999999998754432
Q ss_pred CCCCceEEEEcC-CCceEEEE-eecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeec-ccccccCCC--c
Q 014755 197 SPLEYKVLIYSP-DGRCLLKY-QAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFM-HLSTVRGPC--F 271 (419)
Q Consensus 197 ~~~~~~i~~~d~-~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~--~ 271 (419)
++.|+.|++||+ +++....+ ....|...|++++|+|+|++|++++.|+.|++||+.+++....+. |........ .
T Consensus 269 ~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 348 (435)
T 4e54_B 269 ASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPI 348 (435)
T ss_dssp EETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCC
T ss_pred ecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeE
Confidence 566899999999 44332222 122334489999999999999999999999999999988766654 322110000 0
Q ss_pred cceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEe
Q 014755 272 PAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTR 351 (419)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 351 (419)
...|. ....+..+++++++..++++
T Consensus 349 ~~~~~-------------------------------------------------------~~~~~~~~~~~~d~~~~~~~ 373 (435)
T 4e54_B 349 KAAWH-------------------------------------------------------PRYNLIVVGRYPDPNFKSCT 373 (435)
T ss_dssp BCEEC-------------------------------------------------------SSSSCEEEECCCCTTSCCSS
T ss_pred EEEEc-------------------------------------------------------CCCCEEEEEEcCCCCeEEEE
Confidence 00111 12234456667777666655
Q ss_pred cCCCCceEEEeeccCCCceeec--ccCCCeeEE-EeCCCCCeEEEEeCCCcEEEeecCCCeEE
Q 014755 352 NDSMPTTLWIWDICRQEPAAIL--VQKDPIRAA-TWDPTCTRLVLCTGSSHLYMWTPSGAYCV 411 (419)
Q Consensus 352 ~~d~~~~i~iwd~~~~~~~~~~--~~~~~v~~~-~~s~~~~~l~s~~~dg~i~vw~~~~~~~~ 411 (419)
+.+ ++.|++||..+++++..+ +|...|.++ +|+|+|++|++++ |++|+||+++.++..
T Consensus 374 ~~~-~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 374 PYE-LRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEARTR 434 (435)
T ss_dssp TTC-CCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC-----
T ss_pred ecC-CCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCeee
Confidence 543 268999999999987665 488889988 6999999999876 789999999988754
No 64
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.5e-42 Score=304.21 Aligned_cols=278 Identities=11% Similarity=0.142 Sum_probs=221.4
Q ss_pred cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC--cceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCC
Q 014755 46 CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP--EWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNT 123 (419)
Q Consensus 46 ~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~ 123 (419)
+.++|.+++|+|++++|++++.| +.|++||+.++ +....+..|...|.+++|+|++++|++++.|+ .|++||+.++
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d-~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~-~v~vwd~~~~ 87 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTAT-NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDR-NAYVYEKRPD 87 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSS-SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTS-SEEEC-----
T ss_pred CCCcEEEEEECCCCCEEEEecCC-CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCC-eEEEEEcCCC
Confidence 67799999999999999999876 89999999988 67778889999999999999999999999988 9999999987
Q ss_pred e----EEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeE---EEEEec-cccceeeeeECCCCCeEEEE
Q 014755 124 A----CVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEI---MGVFAV-DTLDLADIEWSPDDSAIVIW 195 (419)
Q Consensus 124 ~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~---~~~~~~-~~~~v~~~~~~~~~~~l~~~ 195 (419)
+ ...+..+...+.+++|+|++++|++++.| +.|++||+++++. ...+.. |...|.+++|+|+++++++
T Consensus 88 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~- 163 (377)
T 3dwl_C 88 GTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGA---RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAA- 163 (377)
T ss_dssp -CCCCEEECCCCSSCEEEEECCTTSSCCEEEESS---SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEE-
T ss_pred CceeeeeEecccCCceEEEEECCCCCEEEEEecC---CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEE-
Confidence 7 44477889999999999999999999987 8999999998773 667777 8999999999999999998
Q ss_pred cCCCCceEEEEcCC-------------------CceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCcee
Q 014755 196 DSPLEYKVLIYSPD-------------------GRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKT 256 (419)
Q Consensus 196 ~~~~~~~i~~~d~~-------------------~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~ 256 (419)
++.|+.|++||+. ++.+..+ .+...|.+++|+|++++|++++.|+.|++||+.+++.
T Consensus 164 -~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 164 -GCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY---PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp -EESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC---CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred -EeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc---cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 6678999999973 3333333 3444899999999999999999999999999988765
Q ss_pred ----eeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCC
Q 014755 257 ----FAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNP 332 (419)
Q Consensus 257 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (419)
+..+ .+|
T Consensus 240 ~~~~~~~~---------------------------------------------------------------------~~~ 250 (377)
T 3dwl_C 240 PPRALITV---------------------------------------------------------------------KLS 250 (377)
T ss_dssp CEEECCCE---------------------------------------------------------------------ECS
T ss_pred cceeeEee---------------------------------------------------------------------cCC
Confidence 2222 247
Q ss_pred CcceEEEEEccCCeEEEEecCCCCceEEEeeccCCC--ce----------------------------------e-----
Q 014755 333 KQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQE--PA----------------------------------A----- 371 (419)
Q Consensus 333 ~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~--~~----------------------------------~----- 371 (419)
...|.+++|+|++++|++++.+ +.+ +|+..... .. .
T Consensus 251 ~~~v~~~~~s~~~~~l~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (377)
T 3dwl_C 251 QLPLRSLLWANESAIVAAGYNY--SPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNM 327 (377)
T ss_dssp SSCEEEEEEEETTEEEEEESSS--SEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC----------------
T ss_pred CCceEEEEEcCCCCEEEEEcCC--cEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccch
Confidence 7789999999999999999876 655 66554211 00 0
Q ss_pred -----------e-cccCCCeeEEEeCCCCC----eEEEEeCCCcEEEeec
Q 014755 372 -----------I-LVQKDPIRAATWDPTCT----RLVLCTGSSHLYMWTP 405 (419)
Q Consensus 372 -----------~-~~~~~~v~~~~~s~~~~----~l~s~~~dg~i~vw~~ 405 (419)
. ..|.+.|+++++.+... .|+|++.||.|++||+
T Consensus 328 ~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 328 DLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp ---------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred hhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 0 02889999999765443 5999999999999986
No 65
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.4e-41 Score=298.34 Aligned_cols=296 Identities=10% Similarity=0.187 Sum_probs=236.0
Q ss_pred ecCcceeEEEEecC----CCeEEEEeccCCeEEEEEccCCcceeeeec-----CCccEeEEEECCC----CCEEEEEecC
Q 014755 45 SCLDKISYIEWALD----SEYILCGLYKRLMIQAWSLTQPEWTCKIDE-----GLAGIAYARWSPD----SRHILTTSDF 111 (419)
Q Consensus 45 ~~~~~v~~~~~s~~----~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~-----~~~~v~~~~~~~~----~~~l~~~~~~ 111 (419)
+|.++|.+++|+|+ ...+++++.+ +.|++||+.+++.+..+.. |...|.+++|+|+ +++|++++.+
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~-~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d 94 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFATVGS-NRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR 94 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEEEET-TEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT
T ss_pred CCCCceEEEEEecccCCCCceEEEECCC-CEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC
Confidence 48999999999984 4455666556 6999999998877666654 4467999999999 6789999988
Q ss_pred CCeEEEEEcCCCeEEE-eccCCCCeeeEEEcc-CCCEEEEEeecCCCCeEEEEeccCCeEEEEE---eccccceeeeeEC
Q 014755 112 QLRLTVWSLLNTACVH-VQSPKHASKGVAFTQ-DGKFAAICTRRDCKDYINLLSCHTWEIMGVF---AVDTLDLADIEWS 186 (419)
Q Consensus 112 ~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~---~~~~~~v~~~~~~ 186 (419)
+ .|++||+.+++... +..+...+.+++|+| ++++|++++.| |.|++||+++++.+..+ ..|...|.+++|+
T Consensus 95 g-~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 170 (366)
T 3k26_A 95 G-IIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKD---HALRLWNIQTDTLVAIFGGVEGHRDEVLSADYD 170 (366)
T ss_dssp C-EEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETT---SCEEEEETTTTEEEEEECSTTSCSSCEEEEEEC
T ss_pred C-EEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCC---CeEEEEEeecCeEEEEecccccccCceeEEEEC
Confidence 7 99999999988877 778999999999999 88999999987 89999999999998888 6788999999999
Q ss_pred CCCCeEEEEcCCCCceEEEEcC-CCceEEEEee--------------------------cCCCCceeEEEEccCCCeEEE
Q 014755 187 PDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQA--------------------------YESGLGVKSISWSPCGQFLAV 239 (419)
Q Consensus 187 ~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~--------------------------~~~~~~v~~~~~s~~~~~l~~ 239 (419)
|+++++++ ++.++.|++||+ +++....+.. ..+...|.+++|+ ++++++
T Consensus 171 ~~~~~l~~--~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~ 246 (366)
T 3k26_A 171 LLGEKIMS--CGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILS 246 (366)
T ss_dssp TTSSEEEE--EETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEE
T ss_pred CCCCEEEE--ecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEE
Confidence 99999998 566999999999 4433322211 1133489999998 779999
Q ss_pred EEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCC
Q 014755 240 GSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPIS 319 (419)
Q Consensus 240 ~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (419)
++.|+.|++||+.+++.......... ......
T Consensus 247 ~~~d~~i~~wd~~~~~~~~~~~~~~~---------------------------------------~~~~~~--------- 278 (366)
T 3k26_A 247 KSCENAIVCWKPGKMEDDIDKIKPSE---------------------------------------SNVTIL--------- 278 (366)
T ss_dssp ECSSSEEEEEEESSTTCCGGGCCTTC---------------------------------------CCEEEE---------
T ss_pred EecCCEEEEEeCCCccccccccccCC---------------------------------------cchhee---------
Confidence 99999999999887654211110000 000000
Q ss_pred CCCCCCCCCCCCCCcceEEEEEccC--CeEEEEecCCCCceEEEeeccCCCce-----eeccc--CCCeeEEEeCCCCCe
Q 014755 320 LPFQKPPTDKPNPKQGIGLMSWSSD--SQYICTRNDSMPTTLWIWDICRQEPA-----AILVQ--KDPIRAATWDPTCTR 390 (419)
Q Consensus 320 ~~~~~~~~~~~~~~~~v~~~~~s~~--g~~l~~~~~d~~~~i~iwd~~~~~~~-----~~~~~--~~~v~~~~~s~~~~~ 390 (419)
..+..|...|.+++|+|+ +++|++++.| |.|++||+.++++. .+.+| ...|++++|+|++++
T Consensus 279 -------~~~~~~~~~v~~~~~s~~~~~~~l~~~~~d--g~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 349 (366)
T 3k26_A 279 -------GRFDYSQCDIWYMRFSMDFWQKMLALGNQV--GKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSI 349 (366)
T ss_dssp -------EEEECSSCCSSCCCCEECTTSSEEEEECTT--SCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSE
T ss_pred -------ccccccCCcEEEEEEcCCCCCcEEEEEecC--CcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCe
Confidence 011247777899999999 9999999999 99999999998654 23345 789999999999999
Q ss_pred EEEEeCCCcEEEeecC
Q 014755 391 LVLCTGSSHLYMWTPS 406 (419)
Q Consensus 391 l~s~~~dg~i~vw~~~ 406 (419)
|++++.||.|++||+.
T Consensus 350 l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 350 LIAVCDDASIWRWDRL 365 (366)
T ss_dssp EEEEETTSEEEEEEC-
T ss_pred EEEEeCCCEEEEEEec
Confidence 9999999999999985
No 66
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.4e-40 Score=322.06 Aligned_cols=369 Identities=13% Similarity=0.119 Sum_probs=279.6
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC-cceeeeecC
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP-EWTCKIDEG 89 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~-~~~~~~~~~ 89 (419)
++|+|++++||+++ ++.|++||+.+++.+..+. |.+.|.+++|+|++++|++++.| |.|++||+.++ .....+..|
T Consensus 61 ~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-g~i~vw~~~~~~~~~~~~~~~ 139 (814)
T 3mkq_A 61 GKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDD-LTVKLWNWENNWALEQTFEGH 139 (814)
T ss_dssp EEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT-SEEEEEEGGGTSEEEEEEECC
T ss_pred EEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCC-CEEEEEECCCCceEEEEEcCC
Confidence 89999999999998 7899999999999887665 99999999999999999999976 89999999987 666778889
Q ss_pred CccEeEEEECC-CCCEEEEEecCCCeEEEEEcCCCeEEE-ec-cCCCCeeeEEEcc--CCCEEEEEeecCCCCeEEEEec
Q 014755 90 LAGIAYARWSP-DSRHILTTSDFQLRLTVWSLLNTACVH-VQ-SPKHASKGVAFTQ--DGKFAAICTRRDCKDYINLLSC 164 (419)
Q Consensus 90 ~~~v~~~~~~~-~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~-~~~~~~~~~~~~~--~~~~l~~~~~~~~~g~v~i~d~ 164 (419)
...|.+++|+| +++.+++++.++ .|++||+.+++... +. .+...+.+++|+| ++.++++++.+ |.|++||+
T Consensus 140 ~~~v~~~~~~p~~~~~l~~~~~dg-~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d---g~i~~~d~ 215 (814)
T 3mkq_A 140 EHFVMCVAFNPKDPSTFASGCLDR-TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDD---LTIKIWDY 215 (814)
T ss_dssp SSCEEEEEEETTEEEEEEEEETTS-EEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTT---SEEEEEET
T ss_pred CCcEEEEEEEcCCCCEEEEEeCCC-eEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCC---CEEEEEEC
Confidence 99999999999 888999999887 99999998866554 33 3447889999999 89999999886 89999999
Q ss_pred cCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCe-EEEEEe
Q 014755 165 HTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQF-LAVGSY 242 (419)
Q Consensus 165 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~~ 242 (419)
++++.+..+..|...+.+++|+|+++.+++ ++.++.|++||+ +++.+..+..+.. .+.+++|+|+++. +++.+.
T Consensus 216 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~dg~v~vwd~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~ 291 (814)
T 3mkq_A 216 QTKSCVATLEGHMSNVSFAVFHPTLPIIIS--GSEDGTLKIWNSSTYKVEKTLNVGLE--RSWCIATHPTGRKNYIASGF 291 (814)
T ss_dssp TTTEEEEEEECCSSCEEEEEECSSSSEEEE--EETTSCEEEEETTTCSEEEEECCSSS--SEEEEEECTTCGGGEEEEEE
T ss_pred CCCcEEEEEcCCCCCEEEEEEcCCCCEEEE--EeCCCeEEEEECCCCcEEEEeecCCC--cEEEEEEccCCCceEEEEEe
Confidence 999999999999999999999999999988 667899999999 7888888877665 8999999999874 355556
Q ss_pred cCcEEEEEcCCceeeeeecccc-cccC----CCccceec---------cCC----------CcccccceeeeccCccccc
Q 014755 243 DQTLRVLNHLTWKTFAEFMHLS-TVRG----PCFPAVFK---------EVD----------EPLQLDMSELCLNDDFIQG 298 (419)
Q Consensus 243 d~~i~v~d~~~~~~~~~~~~~~-~~~~----~~~~~~~~---------~~~----------~~~~~~~~~~~~~~~~~~~ 298 (419)
++.+.+|++........+.... .+.. ......+. ... ......+..+.+.+++...
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l 371 (814)
T 3mkq_A 292 DNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFV 371 (814)
T ss_dssp TTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEE
T ss_pred CCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEE
Confidence 7789999987655444333111 0000 00000000 000 0001112334444333222
Q ss_pred cccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecccCCC
Q 014755 299 NSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILVQKDP 378 (419)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~~~~~ 378 (419)
.... .....+|.+... ...+.+.+.+++|+|+|+++|+++.+ +.|++|+. ..+|...
T Consensus 372 a~~~--~~~~~i~~~~~~------------~~~~~~~i~~~~~spdg~~la~~~~~--g~v~l~~~-------~~~~~~~ 428 (814)
T 3mkq_A 372 TVVG--DGEYVIYTALAW------------RNKAFGKCQDFVWGPDSNSYALIDET--GQIKYYKN-------FKEVTSW 428 (814)
T ss_dssp EEEE--TTEEEEEETTTT------------EEEEEEECSEEEECTTSSCEEEECTT--CCEEEEET-------TEECTTC
T ss_pred EEec--CCEEEEEECccc------------cccCCCceEEEEEeCCCCeEEEEeCC--CcEEEEEC-------CCCccce
Confidence 2221 223334442110 11234567889999999999999988 99999962 2347888
Q ss_pred eeEEEeCCCC---CeEEEEeCCCcEEEeecCCCeEEec
Q 014755 379 IRAATWDPTC---TRLVLCTGSSHLYMWTPSGAYCVSN 413 (419)
Q Consensus 379 v~~~~~s~~~---~~l~s~~~dg~i~vw~~~~~~~~~~ 413 (419)
+.+++|+|++ ++|++++.|+.|++||+.+++++..
T Consensus 429 v~~~~~s~dg~~~~~l~~~~~d~~v~~~d~~~~~~~~~ 466 (814)
T 3mkq_A 429 SVPMHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLVRR 466 (814)
T ss_dssp CCCCSSCCCEEECSSSEEEEETTEEEEECTTTCCEEEE
T ss_pred EEcCCcCccceecceEEEEecCCEEEEEECCcCcEEEE
Confidence 9999999998 6888899999999999998776543
No 67
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.1e-39 Score=288.01 Aligned_cols=281 Identities=14% Similarity=0.193 Sum_probs=234.8
Q ss_pred eEEcCCCCEEEEEeCCeEEEEecCCCcEEEEee--cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCC
Q 014755 13 SCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFS--CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGL 90 (419)
Q Consensus 13 ~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~ 90 (419)
++|++ +.+++.+.++.|++||+.+++...... |...|.+++|+|++++|++++.+ |.|++||+.+++.+..+..|.
T Consensus 99 ~~~s~-~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~d-g~i~iwd~~~~~~~~~~~~~~ 176 (401)
T 4aez_A 99 LDWSN-LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGN-GLVDIYDVESQTKLRTMAGHQ 176 (401)
T ss_dssp EEECT-TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETT-SCEEEEETTTCCEEEEECCCS
T ss_pred EeecC-CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCC-CeEEEEECcCCeEEEEecCCC
Confidence 56665 345555559999999999999887665 68899999999999999999976 899999999999999999999
Q ss_pred ccEeEEEECCCCCEEEEEecCCCeEEEEEcCC-CeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCe
Q 014755 91 AGIAYARWSPDSRHILTTSDFQLRLTVWSLLN-TACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWE 168 (419)
Q Consensus 91 ~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~-~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~ 168 (419)
..|.+++| +++.+++++.++ .|++||++. +.... +..|...+.+++|+|++++|++++.| +.|++||+++++
T Consensus 177 ~~v~~~~~--~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---~~v~iwd~~~~~ 250 (401)
T 4aez_A 177 ARVGCLSW--NRHVLSSGSRSG-AIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGND---NVVQIWDARSSI 250 (401)
T ss_dssp SCEEEEEE--ETTEEEEEETTS-EEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT---SCEEEEETTCSS
T ss_pred CceEEEEE--CCCEEEEEcCCC-CEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCC---CeEEEccCCCCC
Confidence 99999999 567899999887 999999984 44444 78899999999999999999999987 899999999999
Q ss_pred EEEEEeccccceeeeeECCCCCeEEEEc-CCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEE--ecC
Q 014755 169 IMGVFAVDTLDLADIEWSPDDSAIVIWD-SPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGS--YDQ 244 (419)
Q Consensus 169 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~d~ 244 (419)
.+..+..|...|.+++|+|++..+++.. ++.++.|++||+ +++.+..+.... .+.+++|+|+++++++++ .|+
T Consensus 251 ~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~~~~g~~dg 327 (401)
T 4aez_A 251 PKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGS---QVTSLIWSPHSKEIMSTHGFPDN 327 (401)
T ss_dssp EEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSS---CEEEEEECSSSSEEEEEECTTTC
T ss_pred ccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCC---cEEEEEECCCCCeEEEEeecCCC
Confidence 9999999999999999999886665532 346999999999 888887776432 799999999999999954 799
Q ss_pred cEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCC
Q 014755 245 TLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQK 324 (419)
Q Consensus 245 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (419)
.|++||+.+++......
T Consensus 328 ~i~v~~~~~~~~~~~~~--------------------------------------------------------------- 344 (401)
T 4aez_A 328 NLSIWSYSSSGLTKQVD--------------------------------------------------------------- 344 (401)
T ss_dssp EEEEEEEETTEEEEEEE---------------------------------------------------------------
T ss_pred cEEEEecCCccceeEEE---------------------------------------------------------------
Confidence 99999998866544332
Q ss_pred CCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec
Q 014755 325 PPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL 373 (419)
Q Consensus 325 ~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~ 373 (419)
+.+|...|.+++|+|+|++|++++.| |.|++|++.+++.+...
T Consensus 345 ----~~~h~~~v~~~~~s~dg~~l~s~~~d--g~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 345 ----IPAHDTRVLYSALSPDGRILSTAASD--ENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp ----EECCSSCCCEEEECTTSSEEEEECTT--SEEEEEECCC-------
T ss_pred ----ecCCCCCEEEEEECCCCCEEEEEeCC--CcEEEEECCCCcccccc
Confidence 11477779999999999999999999 99999999998866543
No 68
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.7e-40 Score=297.23 Aligned_cols=312 Identities=14% Similarity=0.167 Sum_probs=246.7
Q ss_pred CeEEEEecCCCcEEEEee-cCcceeEEEEec-CCCeEEEEeccCCeEEEEEccCCcceeeee-------------cCCcc
Q 014755 28 YRLVVRDAHSFKVVQLFS-CLDKISYIEWAL-DSEYILCGLYKRLMIQAWSLTQPEWTCKID-------------EGLAG 92 (419)
Q Consensus 28 ~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~-~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~-------------~~~~~ 92 (419)
..+++|+.+.++....+. |.+.|.+++|+| ++++|++++.| |.|++||+.+++....+. .|...
T Consensus 23 ~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~d-g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (408)
T 4a11_B 23 STRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSD-GVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYS 101 (408)
T ss_dssp HHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETT-SCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSC
T ss_pred CcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCC-CeEEEEECCCCcccceEeccccccccccccccCCCc
Confidence 446778877776666554 999999999999 99999999977 899999999886655443 48899
Q ss_pred EeEEEECC-CCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCC---CEEEEEeecCCCCeEEEEeccCCe
Q 014755 93 IAYARWSP-DSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDG---KFAAICTRRDCKDYINLLSCHTWE 168 (419)
Q Consensus 93 v~~~~~~~-~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~~~~~~~g~v~i~d~~~~~ 168 (419)
|.+++|+| ++..+++++.++ .|++||+.+++......+...+.++.++|.+ .++++++.+ +.|++||+++++
T Consensus 102 v~~~~~~~~~~~~l~s~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~d~~~~~ 177 (408)
T 4a11_B 102 VETVQWYPHDTGMFTSSSFDK-TLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRG---PKVQLCDLKSGS 177 (408)
T ss_dssp EEEEEECTTCTTCEEEEETTS-EEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESS---SSEEEEESSSSC
T ss_pred EEEEEEccCCCcEEEEEeCCC-eEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCC---CeEEEEeCCCcc
Confidence 99999999 778899999887 9999999999988866678889999999855 488888876 899999999999
Q ss_pred EEEEEeccccceeeeeECCCCCe-EEEEcCCCCceEEEEcC-CCc-eEEEEee-------------cCCCCceeEEEEcc
Q 014755 169 IMGVFAVDTLDLADIEWSPDDSA-IVIWDSPLEYKVLIYSP-DGR-CLLKYQA-------------YESGLGVKSISWSP 232 (419)
Q Consensus 169 ~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~~~~~~i~~~d~-~~~-~~~~~~~-------------~~~~~~v~~~~~s~ 232 (419)
.+..+..|...|.+++|+|+++. +++ ++.++.|++||+ .+. .+..+.. ..+...|.+++|+|
T Consensus 178 ~~~~~~~~~~~v~~~~~~~~~~~ll~~--~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 255 (408)
T 4a11_B 178 CSHILQGHRQEILAVSWSPRYDYILAT--ASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS 255 (408)
T ss_dssp CCEEECCCCSCEEEEEECSSCTTEEEE--EETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT
T ss_pred eeeeecCCCCcEEEEEECCCCCcEEEE--EcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC
Confidence 99999999999999999999995 656 567899999999 433 4444421 12334899999999
Q ss_pred CCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEE
Q 014755 233 CGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYE 312 (419)
Q Consensus 233 ~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (419)
++++|++++.|+.|++||+.+++....+......
T Consensus 256 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~---------------------------------------------- 289 (408)
T 4a11_B 256 DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCN---------------------------------------------- 289 (408)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCC----------------------------------------------
T ss_pred CCCEEEEecCCCeEEEEECCCCccceeccccccc----------------------------------------------
Confidence 9999999999999999999988765443311000
Q ss_pred eccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc-cCCCeeEEEeCCCCCeE
Q 014755 313 VMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV-QKDPIRAATWDPTCTRL 391 (419)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l 391 (419)
.....+........+..+++++.+ +.|++||+.+++++..+. |...|++++|+|++++|
T Consensus 290 ------------------~~~~~~~~~~~~~~~~~~~~~~~~--~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 349 (408)
T 4a11_B 290 ------------------NSKKGLKFTVSCGCSSEFVFVPYG--STIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQEL 349 (408)
T ss_dssp ------------------CCSSCCCCEECCSSSSCEEEEEET--TEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEE
T ss_pred ------------------cccccceeEEecCCCceEEEEecC--CEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEE
Confidence 000011112222334556666666 999999999999887774 99999999999999999
Q ss_pred EEEeCCCcEEEeecCCCeEEe
Q 014755 392 VLCTGSSHLYMWTPSGAYCVS 412 (419)
Q Consensus 392 ~s~~~dg~i~vw~~~~~~~~~ 412 (419)
++++.||.|++|++.+++.+.
T Consensus 350 ~s~~~dg~i~iw~~~~~~~~~ 370 (408)
T 4a11_B 350 YSGSRDCNILAWVPSLYEPVP 370 (408)
T ss_dssp EEEETTSCEEEEEECC-----
T ss_pred EEECCCCeEEEEeCCCCCccC
Confidence 999999999999999877654
No 69
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=8e-40 Score=291.88 Aligned_cols=299 Identities=13% Similarity=0.147 Sum_probs=241.8
Q ss_pred cccccC---eEEcCCCCEEEEEe-CCeEEEEecCCCc-------EEEEeecCcceeEEEEecC----C---CeEEEEecc
Q 014755 7 YKQTGP---SCFSPNARYIAVAV-DYRLVVRDAHSFK-------VVQLFSCLDKISYIEWALD----S---EYILCGLYK 68 (419)
Q Consensus 7 ~~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~~-------~~~~~~~~~~v~~~~~s~~----~---~~l~~~~~~ 68 (419)
.+|... ++|+| ++|++++ |+.|++||+.+++ ......|...|.+++|+|+ + ++|++++.+
T Consensus 13 ~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~d 90 (397)
T 1sq9_A 13 KAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFS 90 (397)
T ss_dssp SCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETT
T ss_pred hhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCC
Confidence 456665 78998 7899988 8899999999887 4555669999999999999 9 999999977
Q ss_pred CCeEEEEEccCCcc-----eeeeecC-----CccEeEEEEC----CCCCE-EEEEecCCCeEEEEEcCC------CeEE-
Q 014755 69 RLMIQAWSLTQPEW-----TCKIDEG-----LAGIAYARWS----PDSRH-ILTTSDFQLRLTVWSLLN------TACV- 126 (419)
Q Consensus 69 ~g~i~iw~~~~~~~-----~~~~~~~-----~~~v~~~~~~----~~~~~-l~~~~~~~~~i~iwd~~~------~~~~- 126 (419)
|.|++|++.+++. ...+..| ...|.+++|+ |++++ |++++.++ .|++||+++ ++..
T Consensus 91 -g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~ 168 (397)
T 1sq9_A 91 -GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG-TTYIWKFHPFADESNSLTLN 168 (397)
T ss_dssp -SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTS-CEEEEEEESSSSHHHHTTTC
T ss_pred -CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCC-cEEEEeCCccccccccceee
Confidence 8999999999887 7788888 5899999999 99999 99999887 999999987 4322
Q ss_pred -----Ee-------ccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEec---c---ccceeeeeECCC
Q 014755 127 -----HV-------QSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAV---D---TLDLADIEWSPD 188 (419)
Q Consensus 127 -----~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~---~---~~~v~~~~~~~~ 188 (419)
.+ ..+...+.+++|+|++ ++++++.+ +.|++||+++++.+..+.. | ...+.+++|+|+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~ 244 (397)
T 1sq9_A 169 WSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN---GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQ 244 (397)
T ss_dssp CCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT---SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSS
T ss_pred ccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC---CcEEEEECCCCceeEEEeccccccccCCccceEEECCC
Confidence 22 4467889999999999 99988876 8999999999999999998 8 899999999999
Q ss_pred CCeEEEEcCCCC---ceEEEEcC-CCceEEEEee-------------cCCCCceeEEEEccCCCeEEEEEecCcEEEEEc
Q 014755 189 DSAIVIWDSPLE---YKVLIYSP-DGRCLLKYQA-------------YESGLGVKSISWSPCGQFLAVGSYDQTLRVLNH 251 (419)
Q Consensus 189 ~~~l~~~~~~~~---~~i~~~d~-~~~~~~~~~~-------------~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~ 251 (419)
++++++ ++.+ +.|++||+ +++.+..+.. +.. .|.+++|+|++++|++++.|+.|++||+
T Consensus 245 ~~~l~~--~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~dg~i~iwd~ 320 (397)
T 1sq9_A 245 GSLLAI--AHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSS--WVMSLSFNDSGETLCSAGWDGKLRFWDV 320 (397)
T ss_dssp TTEEEE--EEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSS--CEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred CCEEEE--EecCCCCceEEEEECCCCcccceeccCcccccccccccccCC--cEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 999998 5567 99999999 8888888876 555 8999999999999999999999999999
Q ss_pred CCceeeeeeccc-ccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCC
Q 014755 252 LTWKTFAEFMHL-STVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKP 330 (419)
Q Consensus 252 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (419)
.+++++..+... .... ... .... .......
T Consensus 321 ~~~~~~~~~~~~~~~~~-------~~~-~~~~-----------------------------------------g~~~~~~ 351 (397)
T 1sq9_A 321 KTKERITTLNMHCDDIE-------IEE-DILA-----------------------------------------VDEHGDS 351 (397)
T ss_dssp TTTEEEEEEECCGGGCS-------SGG-GCCC-----------------------------------------BCTTSCB
T ss_pred CCCceeEEEecccCccc-------chh-hhhc-----------------------------------------ccccccc
Confidence 999888777511 0000 000 0000 0000112
Q ss_pred CCCcceEEEEEccCC----------eEEEEecCCCCceEEEeeccCCC
Q 014755 331 NPKQGIGLMSWSSDS----------QYICTRNDSMPTTLWIWDICRQE 368 (419)
Q Consensus 331 ~~~~~v~~~~~s~~g----------~~l~~~~~d~~~~i~iwd~~~~~ 368 (419)
.|...|.+++|+|++ ++|++++.| +.|++|++++++
T Consensus 352 ~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~d--g~i~iw~~~~g~ 397 (397)
T 1sq9_A 352 LAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLD--RSIRWFREAGGK 397 (397)
T ss_dssp CSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETT--TEEEEEEEEC--
T ss_pred ccCCceeEEEeccccccccccccccceEEEecCC--CcEEEEEcCCCC
Confidence 358889999999998 799999999 999999998764
No 70
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-41 Score=300.71 Aligned_cols=287 Identities=11% Similarity=0.164 Sum_probs=239.3
Q ss_pred cCcceeEEEEecCCC-eEEEE----------eccCCeEEEEEccCCcce--eeeecCCccEeEEEECCCCCEEEEEecCC
Q 014755 46 CLDKISYIEWALDSE-YILCG----------LYKRLMIQAWSLTQPEWT--CKIDEGLAGIAYARWSPDSRHILTTSDFQ 112 (419)
Q Consensus 46 ~~~~v~~~~~s~~~~-~l~~~----------~~~~g~i~iw~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~~~ 112 (419)
+...|.+++|+|+++ +|+++ +.| +.|++||+.+++.. .....|...|.+++|+|++++|++++.++
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d-~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 89 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTD-SSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNG 89 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCC-CCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSS
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCC-CeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCC
Confidence 445789999999997 77777 555 89999999987532 22336888999999999999999999887
Q ss_pred CeEEEEEcCC----CeEEE-eccCCCCeeeEEEccC-CCEEEEEeecCCCCeEEEEeccCCe------EEEE---Eeccc
Q 014755 113 LRLTVWSLLN----TACVH-VQSPKHASKGVAFTQD-GKFAAICTRRDCKDYINLLSCHTWE------IMGV---FAVDT 177 (419)
Q Consensus 113 ~~i~iwd~~~----~~~~~-~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~g~v~i~d~~~~~------~~~~---~~~~~ 177 (419)
.|++||+.+ .+... +..|...+.+++|+|+ +++|++++.| +.|++||+++++ .... ...|.
T Consensus 90 -~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 165 (416)
T 2pm9_A 90 -SLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNN---GEIFIWDMNKCTESPSNYTPLTPGQSMSSV 165 (416)
T ss_dssp -CEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSS---SCEEBCBTTTTSSCTTTCCCBCCCCSCCSS
T ss_pred -eEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCC---CeEEEEECCCCccccccccccccccccCCC
Confidence 999999987 33444 7889999999999998 8999999886 899999999876 3322 35688
Q ss_pred cceeeeeECCC-CCeEEEEcCCCCceEEEEcC-CCceEEEEeecCC----CCceeEEEEccCC-CeEEEEEecC---cEE
Q 014755 178 LDLADIEWSPD-DSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYES----GLGVKSISWSPCG-QFLAVGSYDQ---TLR 247 (419)
Q Consensus 178 ~~v~~~~~~~~-~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~----~~~v~~~~~s~~~-~~l~~~~~d~---~i~ 247 (419)
..+.+++|+|+ +..+++ ++.++.|++||+ +++.+..+..+.. ...+.+++|+|++ .++++++.|+ .|+
T Consensus 166 ~~v~~~~~~~~~~~~l~~--~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~ 243 (416)
T 2pm9_A 166 DEVISLAWNQSLAHVFAS--AGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSIL 243 (416)
T ss_dssp CCCCEEEECSSCTTEEEE--ESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCC
T ss_pred CCeeEEEeCCCCCcEEEE--EcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEE
Confidence 89999999999 677777 567999999999 7777777766521 3479999999997 6899999998 999
Q ss_pred EEEcCCce-eeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCC
Q 014755 248 VLNHLTWK-TFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPP 326 (419)
Q Consensus 248 v~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (419)
+||+++++ ++..
T Consensus 244 ~~d~~~~~~~~~~------------------------------------------------------------------- 256 (416)
T 2pm9_A 244 IWDLRNANTPLQT------------------------------------------------------------------- 256 (416)
T ss_dssp EEETTSTTSCSBC-------------------------------------------------------------------
T ss_pred EEeCCCCCCCcEE-------------------------------------------------------------------
Confidence 99998752 2222
Q ss_pred CCCC-CCCcceEEEEEcc-CCeEEEEecCCCCceEEEeeccCCCceeec-ccCCCeeEEEeCCCC-CeEEEEeCCCcEEE
Q 014755 327 TDKP-NPKQGIGLMSWSS-DSQYICTRNDSMPTTLWIWDICRQEPAAIL-VQKDPIRAATWDPTC-TRLVLCTGSSHLYM 402 (419)
Q Consensus 327 ~~~~-~~~~~v~~~~~s~-~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~-~~l~s~~~dg~i~v 402 (419)
+. +|...|.+++|+| ++++|++++.| +.|++||+.+++++..+ +|...|++++|+|++ ++|++++.||.|++
T Consensus 257 --~~~~~~~~v~~~~~s~~~~~~l~s~~~d--g~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~i 332 (416)
T 2pm9_A 257 --LNQGHQKGILSLDWCHQDEHLLLSSGRD--NTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEV 332 (416)
T ss_dssp --CCSCCSSCEEEEEECSSCSSCEEEEESS--SEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEE
T ss_pred --eecCccCceeEEEeCCCCCCeEEEEeCC--CCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEE
Confidence 12 4777899999999 99999999999 99999999999887766 599999999999999 79999999999999
Q ss_pred eecCCCeE
Q 014755 403 WTPSGAYC 410 (419)
Q Consensus 403 w~~~~~~~ 410 (419)
|++.+...
T Consensus 333 w~~~~~~~ 340 (416)
T 2pm9_A 333 QTLQNLTN 340 (416)
T ss_dssp EESCCCCC
T ss_pred EEccCCCC
Confidence 99986654
No 71
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.7e-39 Score=308.34 Aligned_cols=297 Identities=14% Similarity=0.210 Sum_probs=239.0
Q ss_pred hcccccC---eEEcCCC-CEEEEEe-CCeEEEEecCCCc-----EE-EEeecCcceeEEEEecCCCeEEEEeccCCeEEE
Q 014755 6 AYKQTGP---SCFSPNA-RYIAVAV-DYRLVVRDAHSFK-----VV-QLFSCLDKISYIEWALDSEYILCGLYKRLMIQA 74 (419)
Q Consensus 6 ~~~~~~~---~~~s~d~-~~la~~~-~~~i~i~~~~~~~-----~~-~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~i 74 (419)
..+|... ++|+|++ ++|++|+ |++|++|++.+.. .. ...+|...|.+++|+|++++|++++.| |+|+|
T Consensus 378 l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~D-g~v~v 456 (694)
T 3dm0_A 378 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD-GELRL 456 (694)
T ss_dssp EECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETT-SEEEE
T ss_pred cccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCC-CcEEE
Confidence 3467665 7899865 7899998 8999999987532 22 345699999999999999999999977 89999
Q ss_pred EEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEe----ccCCCCeeeEEEccCC--CEEE
Q 014755 75 WSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHV----QSPKHASKGVAFTQDG--KFAA 148 (419)
Q Consensus 75 w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~----~~~~~~~~~~~~~~~~--~~l~ 148 (419)
||+.+++....+.+|...|.+++|+|++++|++++.|+ .|++||+.......+ ..|...+.+++|+|++ ..++
T Consensus 457 wd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~-~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~ 535 (694)
T 3dm0_A 457 WDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDR-TIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIV 535 (694)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTS-CEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEE
T ss_pred EECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCC-EEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEE
Confidence 99999999999999999999999999999999999988 999999877655443 3577789999999987 5788
Q ss_pred EEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeE
Q 014755 149 ICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKS 227 (419)
Q Consensus 149 ~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~ 227 (419)
+++.| +.|++||+++++....+..|...|.+++|+|+++++++ ++.|+.|++||+ +++.+..+..+ ..+.+
T Consensus 536 s~s~d---~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s--g~~Dg~i~iwd~~~~~~~~~~~~~---~~v~~ 607 (694)
T 3dm0_A 536 SASWD---KTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCAS--GGKDGVVLLWDLAEGKKLYSLEAN---SVIHA 607 (694)
T ss_dssp EEETT---SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE--EETTSBCEEEETTTTEEEECCBCS---SCEEE
T ss_pred EEeCC---CeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEE--EeCCCeEEEEECCCCceEEEecCC---CcEEE
Confidence 88887 89999999999999999999999999999999999998 677999999999 77776665543 26999
Q ss_pred EEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCce
Q 014755 228 ISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHI 307 (419)
Q Consensus 228 ~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (419)
++|+|++.++++++ ++.|++||+++++.+..+........ ..... .+
T Consensus 608 ~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~----~~~~~--------------------------~~-- 654 (694)
T 3dm0_A 608 LCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEA----EKADN--------------------------SG-- 654 (694)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC------------------------------------------
T ss_pred EEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhcccccccc----ccccc--------------------------cc--
Confidence 99999998777665 56799999999988887752111000 00000 00
Q ss_pred EEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeecc
Q 014755 308 KVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDIC 365 (419)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~ 365 (419)
......+...+++++|||+|++|++|+.| |.|+||++.
T Consensus 655 ------------------~~~~~~~~~~~~~l~~spdg~~l~sgs~D--g~i~iW~i~ 692 (694)
T 3dm0_A 655 ------------------PAATKRKVIYCTSLNWSADGSTLFSGYTD--GVIRVWGIG 692 (694)
T ss_dssp ------------------------CCCCEEEEEECTTSSEEEEEETT--SEEEEEEC-
T ss_pred ------------------cccCCceeEEeeeEEEcCCCCEEEEEcCC--CeEEEEecc
Confidence 00001133347899999999999999999 999999985
No 72
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.1e-40 Score=299.70 Aligned_cols=281 Identities=10% Similarity=0.068 Sum_probs=238.9
Q ss_pred cceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE
Q 014755 48 DKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH 127 (419)
Q Consensus 48 ~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~ 127 (419)
..+++++|+|++++|++++.| |.|++||+.+++....+..+ ..+....|+|++++|++++.++ .|++||+++++...
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d-~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~~ 133 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLD-GHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEG-DIKVLDSNFNLQRE 133 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEET-TEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTS-CEEEECTTSCEEEE
T ss_pred ccccceeeeecCCeEEEEEcC-CcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCC-CEEEEeCCCcceee
Confidence 345689999999999999987 89999999988766555555 4455667899999999999987 99999999998888
Q ss_pred -eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEE
Q 014755 128 -VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIY 206 (419)
Q Consensus 128 -~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~ 206 (419)
+..|...+.+++|+|++++|++++.| +.|++||+++++.+..+..|...|.+++|+|+++.+++ ++.|+.|++|
T Consensus 134 ~~~~h~~~v~~~~~~~~~~~l~s~s~d---~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s--~~~d~~v~iw 208 (420)
T 3vl1_A 134 IDQAHVSEITKLKFFPSGEALISSSQD---MQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLS--ASLDGTIRLW 208 (420)
T ss_dssp ETTSSSSCEEEEEECTTSSEEEEEETT---SEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEE--EETTSCEEEE
T ss_pred ecccccCccEEEEECCCCCEEEEEeCC---CeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEE--EcCCCcEEEe
Confidence 46899999999999999999999987 89999999999999999999999999999999999998 6679999999
Q ss_pred cC-CCceEEEEeecC-C---------------------CCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeeccc
Q 014755 207 SP-DGRCLLKYQAYE-S---------------------GLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHL 263 (419)
Q Consensus 207 d~-~~~~~~~~~~~~-~---------------------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~ 263 (419)
|+ +++.+..+..+. + ...+.+++|+|++++|++++.||.|++||+.+++.+..+.
T Consensus 209 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-- 286 (420)
T 3vl1_A 209 ECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLP-- 286 (420)
T ss_dssp ETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEEC--
T ss_pred ECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcc--
Confidence 99 788888776532 1 1245556668999999999999999999999877665542
Q ss_pred ccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEcc
Q 014755 264 STVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSS 343 (419)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 343 (419)
..|...|.+++|+|
T Consensus 287 ------------------------------------------------------------------~~~~~~v~~~~~~~ 300 (420)
T 3vl1_A 287 ------------------------------------------------------------------SKFTCSCNSLTVDG 300 (420)
T ss_dssp ------------------------------------------------------------------CTTSSCEEEEEECS
T ss_pred ------------------------------------------------------------------cccCCCceeEEEeC
Confidence 13667799999999
Q ss_pred CCe-EEEEecCCCCceEEEeeccCCCc-eeec-c-cCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCC
Q 014755 344 DSQ-YICTRNDSMPTTLWIWDICRQEP-AAIL-V-QKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSG 407 (419)
Q Consensus 344 ~g~-~l~~~~~d~~~~i~iwd~~~~~~-~~~~-~-~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 407 (419)
+++ +|++++.| |.|++||+.+++. +..+ . |...|+++.| +++++|++++.||.|++|++..
T Consensus 301 ~~~~~l~~g~~d--g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 301 NNANYIYAGYEN--GMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp SCTTEEEEEETT--SEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECC
T ss_pred CCCCEEEEEeCC--CeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccC
Confidence 999 99999999 9999999998753 4333 4 7778888865 5788999999999999999875
No 73
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.3e-39 Score=287.81 Aligned_cols=313 Identities=13% Similarity=0.140 Sum_probs=240.8
Q ss_pred ccCeEEcCCCCEEEEEe-CCeEEEEecCCCc--EEEEe-ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceee
Q 014755 10 TGPSCFSPNARYIAVAV-DYRLVVRDAHSFK--VVQLF-SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCK 85 (419)
Q Consensus 10 ~~~~~~s~d~~~la~~~-~~~i~i~~~~~~~--~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~ 85 (419)
...++|+|++++||+++ ++.|++||+.+++ .+..+ .|...|.+++|+|++++|++++.| |.|++||+++++....
T Consensus 11 i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-g~i~vwd~~~~~~~~~ 89 (372)
T 1k8k_C 11 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD-RNAYVWTLKGRTWKPT 89 (372)
T ss_dssp CCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT-SCEEEEEEETTEEEEE
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC-CeEEEEECCCCeeeee
Confidence 34489999999999996 8999999999986 55544 599999999999999999999976 8999999998865443
Q ss_pred --eecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCe----EEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCe
Q 014755 86 --IDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTA----CVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDY 158 (419)
Q Consensus 86 --~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~----~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~ 158 (419)
+..|...|.+++|+|++++|++++.++ .|++||++.++ ... ...+...+.+++|+|+++++++++.+ |.
T Consensus 90 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---g~ 165 (372)
T 1k8k_C 90 LVILRINRAARCVRWAPNEKKFAVGSGSR-VISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD---FK 165 (372)
T ss_dssp EECCCCSSCEEEEEECTTSSEEEEEETTS-SEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT---SC
T ss_pred EEeecCCCceeEEEECCCCCEEEEEeCCC-EEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC---CC
Confidence 356888999999999999999999887 99999999865 222 35678889999999999999999887 89
Q ss_pred EEEEec------------------cCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeec
Q 014755 159 INLLSC------------------HTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAY 219 (419)
Q Consensus 159 v~i~d~------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~ 219 (419)
|++||+ ..++.+..+..|...+.+++|+|+++++++ ++.++.|++||+ +++.+..+..+
T Consensus 166 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~d~~i~i~d~~~~~~~~~~~~~ 243 (372)
T 1k8k_C 166 CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAW--VSHDSTVCLADADKKMAVATLASE 243 (372)
T ss_dssp EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEE--EETTTEEEEEEGGGTTEEEEEECS
T ss_pred EEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEE--EeCCCEEEEEECCCCceeEEEccC
Confidence 999995 467888888899999999999999999998 567999999999 88888888877
Q ss_pred CCCCceeEEEEccCCCeEEEEEecCcEEEEEcCC--ce--eeeeecccc-cccCC-CccceeccCCCcccccceeeeccC
Q 014755 220 ESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLT--WK--TFAEFMHLS-TVRGP-CFPAVFKEVDEPLQLDMSELCLND 293 (419)
Q Consensus 220 ~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~--~~--~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 293 (419)
.. .+.+++|+|++++++++ .|+.|++|++.+ ++ .+..+.... ..... .....|...
T Consensus 244 ~~--~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 305 (372)
T 1k8k_C 244 TL--PLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNL--------------- 305 (372)
T ss_dssp SC--CEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHC---------------
T ss_pred CC--CeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhc---------------
Confidence 65 89999999999988887 899999999987 53 332222100 00000 000000000
Q ss_pred ccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEc-cCC---eEEEEecCCCCceEEEeeccCCC
Q 014755 294 DFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWS-SDS---QYICTRNDSMPTTLWIWDICRQE 368 (419)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-~~g---~~l~~~~~d~~~~i~iwd~~~~~ 368 (419)
. ..+.. ...+ ........+|...|++++|+ ++| ++|++++.| |.|++||+.+++
T Consensus 306 -------~-~~~~~----------~~~~-~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~D--g~i~~W~~~~~~ 363 (372)
T 1k8k_C 306 -------D-KKASS----------EGSA-AAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMD--GGMSIWDVRSLE 363 (372)
T ss_dssp -------C-CCC--------------------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETT--SEEEEEEHHHHH
T ss_pred -------c-ccccc----------ccCc-cccccccccccCCcceeEEecCCCcceeeEEEecCC--CceEEEEecChh
Confidence 0 00000 0000 00011123799999999966 677 999999999 999999998754
No 74
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=4.6e-40 Score=290.10 Aligned_cols=283 Identities=15% Similarity=0.223 Sum_probs=232.0
Q ss_pred ccccC---eEEcCC---CC--EEEEEeCCeEEEEecCCCcEEEEee------cCcceeEEEEecC----CCeEEEEeccC
Q 014755 8 KQTGP---SCFSPN---AR--YIAVAVDYRLVVRDAHSFKVVQLFS------CLDKISYIEWALD----SEYILCGLYKR 69 (419)
Q Consensus 8 ~~~~~---~~~s~d---~~--~la~~~~~~i~i~~~~~~~~~~~~~------~~~~v~~~~~s~~----~~~l~~~~~~~ 69 (419)
+|... ++|+|+ +. ++++++++.|++||+.+++.+..+. |...|.+++|+|+ +++|++++.|
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d- 94 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR- 94 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT-
T ss_pred CCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC-
Confidence 56555 789984 33 6666668899999999887665443 5678999999999 6689999876
Q ss_pred CeEEEEEccCCcceeeeecCCccEeEEEECC-CCCEEEEEecCCCeEEEEEcCCCeEEE-e---ccCCCCeeeEEEccCC
Q 014755 70 LMIQAWSLTQPEWTCKIDEGLAGIAYARWSP-DSRHILTTSDFQLRLTVWSLLNTACVH-V---QSPKHASKGVAFTQDG 144 (419)
Q Consensus 70 g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~i~iwd~~~~~~~~-~---~~~~~~~~~~~~~~~~ 144 (419)
|.|++||+.+++.+..+..|...|.+++|+| ++++|++++.++ .|++||+++++... + ..+...+.+++|+|++
T Consensus 95 g~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 173 (366)
T 3k26_A 95 GIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDH-ALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLG 173 (366)
T ss_dssp CEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTS-CEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTS
T ss_pred CEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCC-eEEEEEeecCeEEEEecccccccCceeEEEECCCC
Confidence 8999999999999999999999999999999 899999999987 99999999998877 4 5788999999999999
Q ss_pred CEEEEEeecCCCCeEEEEeccCCeEEEEEec----------------------------cccceeeeeECCCCCeEEEEc
Q 014755 145 KFAAICTRRDCKDYINLLSCHTWEIMGVFAV----------------------------DTLDLADIEWSPDDSAIVIWD 196 (419)
Q Consensus 145 ~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~----------------------------~~~~v~~~~~~~~~~~l~~~~ 196 (419)
++|++++.| |.|++||+++++....+.. |...|.+++|+ ++++++
T Consensus 174 ~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~-- 246 (366)
T 3k26_A 174 EKIMSCGMD---HSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILS-- 246 (366)
T ss_dssp SEEEEEETT---SCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEE--
T ss_pred CEEEEecCC---CCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEE--
Confidence 999999987 8999999998665443332 88899999998 667777
Q ss_pred CCCCceEEEEcC-CCc--------------eEEEEeecCCCCceeEEEEccC--CCeEEEEEecCcEEEEEcCCceeeee
Q 014755 197 SPLEYKVLIYSP-DGR--------------CLLKYQAYESGLGVKSISWSPC--GQFLAVGSYDQTLRVLNHLTWKTFAE 259 (419)
Q Consensus 197 ~~~~~~i~~~d~-~~~--------------~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~d~~i~v~d~~~~~~~~~ 259 (419)
++.++.|++||+ ++. .+..+..+.. .|.+++|+|+ +++|++++.||.|++||+.++++...
T Consensus 247 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 324 (366)
T 3k26_A 247 KSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQC--DIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKA 324 (366)
T ss_dssp ECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSC--CSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGC
T ss_pred EecCCEEEEEeCCCccccccccccCCcchheeccccccCC--cEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccc
Confidence 667999999998 443 2556666555 7999999999 99999999999999999988765431
Q ss_pred ecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEE
Q 014755 260 FMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLM 339 (419)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 339 (419)
... .+. ...|...|.++
T Consensus 325 ~~~-----------~~~----------------------------------------------------~~~~~~~v~~~ 341 (366)
T 3k26_A 325 KCT-----------TLT----------------------------------------------------HHKCGAAIRQT 341 (366)
T ss_dssp EEE-----------EEC----------------------------------------------------CTTCCSCEEEE
T ss_pred cce-----------EEc----------------------------------------------------ccccCCceEEE
Confidence 110 000 00136789999
Q ss_pred EEccCCeEEEEecCCCCceEEEeeccC
Q 014755 340 SWSSDSQYICTRNDSMPTTLWIWDICR 366 (419)
Q Consensus 340 ~~s~~g~~l~~~~~d~~~~i~iwd~~~ 366 (419)
+|+|++++|++++.| |.|++||+.+
T Consensus 342 ~~s~~~~~l~s~~~d--g~i~iwd~~~ 366 (366)
T 3k26_A 342 SFSRDSSILIAVCDD--ASIWRWDRLR 366 (366)
T ss_dssp EECTTSSEEEEEETT--SEEEEEEC--
T ss_pred EeCCCCCeEEEEeCC--CEEEEEEecC
Confidence 999999999999999 9999999853
No 75
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.8e-39 Score=288.12 Aligned_cols=278 Identities=10% Similarity=0.071 Sum_probs=227.4
Q ss_pred ccccC---eEEcCCC-CEEEEEe-CCeEEEEecCCCcEEEEe---ecCcceeEEEEec-CCCeEEEEeccCCeEEEEEcc
Q 014755 8 KQTGP---SCFSPNA-RYIAVAV-DYRLVVRDAHSFKVVQLF---SCLDKISYIEWAL-DSEYILCGLYKRLMIQAWSLT 78 (419)
Q Consensus 8 ~~~~~---~~~s~d~-~~la~~~-~~~i~i~~~~~~~~~~~~---~~~~~v~~~~~s~-~~~~l~~~~~~~g~i~iw~~~ 78 (419)
+|... ++|+|++ ++||+++ ++.|+|||+.+++....+ +|...|.+++|+| ++++|++++.| +.|++||+.
T Consensus 71 ~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-~~i~iwd~~ 149 (383)
T 3ei3_B 71 PFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR-GATTLRDFS 149 (383)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT-TEEEEEETT
T ss_pred CCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC-CEEEEEECC
Confidence 45444 8899999 9999998 889999999988877765 4899999999999 78899999876 899999998
Q ss_pred CCcceeeeecCC---ccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCC-EEEEEeecC
Q 014755 79 QPEWTCKIDEGL---AGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGK-FAAICTRRD 154 (419)
Q Consensus 79 ~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~ 154 (419)
+ +....+..+. ..|.+++|+|++++|++++.++ .|++||++......+..|...+.+++|+|+++ ++++++.|
T Consensus 150 ~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d- 226 (383)
T 3ei3_B 150 G-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTG-RLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVD- 226 (383)
T ss_dssp S-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTS-EEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEEEEETT-
T ss_pred C-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCC-CEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCC-
Confidence 6 4444554443 7799999999999999999987 99999996555445888999999999999998 88888886
Q ss_pred CCCeEEEEeccC----CeEEEEEeccccceeeeeECC-CCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCC-----C-
Q 014755 155 CKDYINLLSCHT----WEIMGVFAVDTLDLADIEWSP-DDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYES-----G- 222 (419)
Q Consensus 155 ~~g~v~i~d~~~----~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~-----~- 222 (419)
+.|++||+++ ++.+..+ .|...+.+++|+| +++++++ ++.|+.|++||+ +++....+..+.. .
T Consensus 227 --~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~--~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 301 (383)
T 3ei3_B 227 --ATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLT--TDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLT 301 (383)
T ss_dssp --SEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEE--EESSSEEEEEETTBTTSCSEEEECCBCCCTTSC
T ss_pred --CEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEE--EcCCCcEEEEECCCCcccccccccccccccccc
Confidence 8999999998 5666666 6889999999999 9999998 567999999999 6666666654431 1
Q ss_pred ---------CceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccC
Q 014755 223 ---------LGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLND 293 (419)
Q Consensus 223 ---------~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (419)
..+..++|+|++++ +++.|+.|++||+.+++.+..+...
T Consensus 302 ~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~------------------------------ 349 (383)
T 3ei3_B 302 PIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDP------------------------------ 349 (383)
T ss_dssp CCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBT------------------------------
T ss_pred ceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCC------------------------------
Confidence 13445667777766 7778999999999999887776410
Q ss_pred ccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccC
Q 014755 294 DFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICR 366 (419)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~ 366 (419)
.|...+..++|+|++++|++++ | +.|+|||+++
T Consensus 350 -------------------------------------~~~~~~~~~~~s~~g~~l~s~s-d--~~i~iw~~~~ 382 (383)
T 3ei3_B 350 -------------------------------------NAAGIISLNKFSPTGDVLASGM-G--FNILIWNRED 382 (383)
T ss_dssp -------------------------------------TBCSCCCEEEECTTSSEEEEEE-T--TEEEEEECC-
T ss_pred -------------------------------------CCCceEEEEEEecCccEEEEec-C--CcEEEEecCC
Confidence 1344567789999999999997 7 9999999874
No 76
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=3.4e-38 Score=272.64 Aligned_cols=276 Identities=19% Similarity=0.281 Sum_probs=232.4
Q ss_pred cCeEEcCCCCEEEEEeCCeEEEEecCCCcEEEEee---cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeee
Q 014755 11 GPSCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFS---CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKID 87 (419)
Q Consensus 11 ~~~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~ 87 (419)
+.|+||+++ +||+|.|++|+|||+.++++++.+. |...|.+++|+|++++|++|+.| |+|++|++++++.+..+.
T Consensus 29 ~~l~WS~~~-~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~D-g~v~iw~~~~~~~~~~~~ 106 (318)
T 4ggc_A 29 NLVDWSSGN-VLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS-AEVQLWDVQQQKRLRNMT 106 (318)
T ss_dssp BCEEECTTS-EEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT-SEEEEEETTTTEEEEEEE
T ss_pred eEEEECCCC-EEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECC-CcEEEeecCCceeEEEec
Confidence 458999986 8999999999999999999888663 77789999999999999999977 899999999999999999
Q ss_pred cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEE-E-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEecc
Q 014755 88 EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACV-H-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCH 165 (419)
Q Consensus 88 ~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~-~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~ 165 (419)
.|...+.++.+ ++..+++++.++ .+++|+...+... . +..|...+..+.++++++++++++.| +.|++||++
T Consensus 107 ~h~~~~~~~~~--~~~~l~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d---~~i~iwd~~ 180 (318)
T 4ggc_A 107 SHSARVGSLSW--NSYILSSGSRSG-HIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGND---NLVNVWPSA 180 (318)
T ss_dssp CCSSCEEEEEE--ETTEEEEEETTS-EEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT---SCEEEEESS
T ss_pred CccceEEEeec--CCCEEEEEecCC-ceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecC---cceeEEECC
Confidence 99988876554 567899998887 9999999875433 3 77888999999999999999999987 899999998
Q ss_pred CCeE----EEEEeccccceeeeeECCCCCeEE-EEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEE
Q 014755 166 TWEI----MGVFAVDTLDLADIEWSPDDSAIV-IWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAV 239 (419)
Q Consensus 166 ~~~~----~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 239 (419)
+++. ......+...+.++.++|++..++ +..+..++.|++||. ........ .+.. .+..+.|+|+++.+++
T Consensus 181 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~-~~~~--~v~~~~~~~~~~~~~~ 257 (318)
T 4ggc_A 181 PGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV-DAHS--QVCSILWSPHYKELIS 257 (318)
T ss_dssp CBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE-ECSS--CEEEEEEETTTTEEEE
T ss_pred CCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccc-ccee--eeeeeeecccccceEE
Confidence 7643 344556678899999999876554 445677899999999 44444443 3333 6999999999998877
Q ss_pred EE--ecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCC
Q 014755 240 GS--YDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIP 317 (419)
Q Consensus 240 ~~--~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (419)
++ .|+.|++||+.+++++..+.
T Consensus 258 ~sg~~d~~i~iwd~~~~~~~~~l~-------------------------------------------------------- 281 (318)
T 4ggc_A 258 GHGFAQNQLVIWKYPTMAKVAELK-------------------------------------------------------- 281 (318)
T ss_dssp EECTTTCCEEEEETTTCCEEEEEC--------------------------------------------------------
T ss_pred EEEcCCCEEEEEECCCCcEEEEEc--------------------------------------------------------
Confidence 65 68999999999998887764
Q ss_pred CCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCC
Q 014755 318 ISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQE 368 (419)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~ 368 (419)
+|.+.|++++|+|||++||+++.| ++|+|||+.+..
T Consensus 282 -------------gH~~~V~~l~~spdg~~l~S~s~D--~~v~iWd~~~~d 317 (318)
T 4ggc_A 282 -------------GHTSRVLSLTMSPDGATVASAAAD--ETLRLWRCFELD 317 (318)
T ss_dssp -------------CCSSCEEEEEECTTSSCEEEEETT--TEEEEECCSCCC
T ss_pred -------------CCCCCEEEEEEcCCCCEEEEEecC--CeEEEEECCCCC
Confidence 588889999999999999999999 999999987643
No 77
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=4e-40 Score=289.08 Aligned_cols=279 Identities=15% Similarity=0.115 Sum_probs=212.6
Q ss_pred CeEEcCCCCEEEEEeC--------CeEEEEecCCCcE--------EE---EeecCcceeEEEEecCCCeEEEEecc----
Q 014755 12 PSCFSPNARYIAVAVD--------YRLVVRDAHSFKV--------VQ---LFSCLDKISYIEWALDSEYILCGLYK---- 68 (419)
Q Consensus 12 ~~~~s~d~~~la~~~~--------~~i~i~~~~~~~~--------~~---~~~~~~~v~~~~~s~~~~~l~~~~~~---- 68 (419)
+++|+|||++||+|+. ++|++|++..... .. +-.|...|.+++++ ++.+++++.+
T Consensus 19 sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~~~~~~ 96 (365)
T 4h5i_A 19 GAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCNENSTK 96 (365)
T ss_dssp EEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECCCCHHH
T ss_pred EEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEECCCccE
Confidence 3899999999999863 2599999875431 11 12367778887665 5677776432
Q ss_pred ------CCeEEEEEccCCcceeee---------ecCCccEeEEEECCCCCEEEEEe--cCCCeEEEEEcCCCeEEEeccC
Q 014755 69 ------RLMIQAWSLTQPEWTCKI---------DEGLAGIAYARWSPDSRHILTTS--DFQLRLTVWSLLNTACVHVQSP 131 (419)
Q Consensus 69 ------~g~i~iw~~~~~~~~~~~---------~~~~~~v~~~~~~~~~~~l~~~~--~~~~~i~iwd~~~~~~~~~~~~ 131 (419)
++.+++|++.+....... ..+...+.+++|+|||+++++++ .|+ .|++||+++++.+....+
T Consensus 97 l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~-~i~iwd~~~~~~~~~~~~ 175 (365)
T 4h5i_A 97 ITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPA-IMRIIDPSDLTEKFEIET 175 (365)
T ss_dssp HHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSC-EEEEEETTTTEEEEEEEC
T ss_pred EEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCC-EEEEeECCCCcEEEEeCC
Confidence 368999998766432221 12334588999999999988765 455 999999999998885567
Q ss_pred CCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEE--EeccccceeeeeECCCCCeEEEEcCCC--CceEEEEc
Q 014755 132 KHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGV--FAVDTLDLADIEWSPDDSAIVIWDSPL--EYKVLIYS 207 (419)
Q Consensus 132 ~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~~~--~~~i~~~d 207 (419)
...|.+++|+|||+++++++.+ .+.+|+..+++.+.. ...|...+.+++|+|+++.+++..... ...++.|+
T Consensus 176 ~~~V~~v~fspdg~~l~s~s~~----~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~ 251 (365)
T 4h5i_A 176 RGEVKDLHFSTDGKVVAYITGS----SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKIS 251 (365)
T ss_dssp SSCCCEEEECTTSSEEEEECSS----CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEE
T ss_pred CCceEEEEEccCCceEEeccce----eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecc
Confidence 8889999999999999999854 678888777766543 345778899999999999998743222 23688888
Q ss_pred C-CCce--EEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccc
Q 014755 208 P-DGRC--LLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQL 284 (419)
Q Consensus 208 ~-~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (419)
. .+.. ........+...|++++|+|+|++||+|+.|++|+|||+++++++..+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~----------------------- 308 (365)
T 4h5i_A 252 IKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFK----------------------- 308 (365)
T ss_dssp EETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEET-----------------------
T ss_pred cccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEec-----------------------
Confidence 8 3322 2222223334489999999999999999999999999999998877652
Q ss_pred cceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeec
Q 014755 285 DMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDI 364 (419)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~ 364 (419)
.+|...|++++|||||++||+++.| ++|+|||+
T Consensus 309 ---------------------------------------------~gH~~~V~~v~fSpdg~~laS~S~D--~tvrvw~i 341 (365)
T 4h5i_A 309 ---------------------------------------------QAHSFAITEVTISPDSTYVASVSAA--NTIHIIKL 341 (365)
T ss_dssp ---------------------------------------------TSSSSCEEEEEECTTSCEEEEEETT--SEEEEEEC
T ss_pred ---------------------------------------------CcccCCEEEEEECCCCCEEEEEeCC--CeEEEEEc
Confidence 2588889999999999999999999 99999999
Q ss_pred cCC
Q 014755 365 CRQ 367 (419)
Q Consensus 365 ~~~ 367 (419)
...
T Consensus 342 p~~ 344 (365)
T 4h5i_A 342 PLN 344 (365)
T ss_dssp CTT
T ss_pred CCC
Confidence 653
No 78
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=286.00 Aligned_cols=300 Identities=13% Similarity=0.110 Sum_probs=230.3
Q ss_pred ccccC---eEEcCCCCEEEEEe-----CCeEEEEecCCCcEEE--EeecCcceeEEEEecC---CCeEEEEeccCCeEEE
Q 014755 8 KQTGP---SCFSPNARYIAVAV-----DYRLVVRDAHSFKVVQ--LFSCLDKISYIEWALD---SEYILCGLYKRLMIQA 74 (419)
Q Consensus 8 ~~~~~---~~~s~d~~~la~~~-----~~~i~i~~~~~~~~~~--~~~~~~~v~~~~~s~~---~~~l~~~~~~~g~i~i 74 (419)
+|... ++|+|+++.+++++ ++.|++||+.+++... ..+|...|.+++|+|+ +++|++++.+ |.|++
T Consensus 16 ~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-g~i~i 94 (357)
T 3i2n_A 16 GFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG-GNLHI 94 (357)
T ss_dssp ECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT-SCEEE
T ss_pred CCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC-CeEEE
Confidence 45544 89999997665544 6889999999988754 4469999999999998 6999999976 89999
Q ss_pred EEccCCc-ceeeeecCCccEeEEE------ECCCCCEEEEEecCCCeEEEEEcCCCe-EEE-eccCCC----CeeeEE--
Q 014755 75 WSLTQPE-WTCKIDEGLAGIAYAR------WSPDSRHILTTSDFQLRLTVWSLLNTA-CVH-VQSPKH----ASKGVA-- 139 (419)
Q Consensus 75 w~~~~~~-~~~~~~~~~~~v~~~~------~~~~~~~l~~~~~~~~~i~iwd~~~~~-~~~-~~~~~~----~~~~~~-- 139 (419)
||+.+++ ....+..|...|.++. |+|++++|++++.++ .|++||+++++ ... +..+.. .+.+++
T Consensus 95 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~-~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 173 (357)
T 3i2n_A 95 WNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDG-TVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFG 173 (357)
T ss_dssp ECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTS-CEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEE
T ss_pred EeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCC-eEEEEeCCCCCCcceeccccCCCCCCceEEEEEE
Confidence 9999887 7888889999999995 578999999999988 99999999875 333 444333 678887
Q ss_pred --EccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECC---CCCeEEEEcCCCCceEEEEcC-CCceE
Q 014755 140 --FTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSP---DDSAIVIWDSPLEYKVLIYSP-DGRCL 213 (419)
Q Consensus 140 --~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~~~~~~i~~~d~-~~~~~ 213 (419)
|+|+++++++++.+ |.|++||+++++.... ..+...+.+++|+| ++..+++ ++.++.|++||+ +++..
T Consensus 174 ~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~--~~~dg~i~i~d~~~~~~~ 247 (357)
T 3i2n_A 174 NAYNQEERVVCAGYDN---GDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVA--TSLEGKFHVFDMRTQHPT 247 (357)
T ss_dssp CCCC-CCCEEEEEETT---SEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEE--EESTTEEEEEEEEEEETT
T ss_pred eccCCCCCEEEEEccC---CeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEE--ECCCCeEEEEeCcCCCcc
Confidence 78999999999886 8999999999887544 56778999999999 8999988 567999999999 44433
Q ss_pred EEEe-----ecCCCCceeEEEEccCCC-eEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccce
Q 014755 214 LKYQ-----AYESGLGVKSISWSPCGQ-FLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMS 287 (419)
Q Consensus 214 ~~~~-----~~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (419)
..+. .+.. .|.+++|+|+++ +|++++.||.|++||+.++.............
T Consensus 248 ~~~~~~~~~~~~~--~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~-------------------- 305 (357)
T 3i2n_A 248 KGFASVSEKAHKS--TVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEM-------------------- 305 (357)
T ss_dssp TEEEEEEEECCSS--CEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCC--------------------
T ss_pred cceeeeccCCCcC--CEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCcc--------------------
Confidence 3332 4444 899999999998 89999999999999998765443332111000
Q ss_pred eeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEE-EecCCCCceEEEeeccC
Q 014755 288 ELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYIC-TRNDSMPTTLWIWDICR 366 (419)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~-~~~~d~~~~i~iwd~~~ 366 (419)
...+...... .+.+|...|++++|+|++++|+ +++.| +.|++||+.+
T Consensus 306 --------------~~~~~~~~~~----------------~~~~~~~~v~~~~~s~~~~~l~~s~~~d--~~i~iw~~~~ 353 (357)
T 3i2n_A 306 --------------GVAGSVSLLQ----------------NVTLSTQPISSLDWSPDKRGLCVCSSFD--QTVRVLIVTK 353 (357)
T ss_dssp --------------CCCCEEEEEE----------------EEECCSSCEEEEEECSSSTTEEEEEETT--SEEEEEEECC
T ss_pred --------------ccccccceee----------------ccccCCCCeeEEEEcCCCCeEEEEecCC--CcEEEEECCC
Confidence 0001111111 1235888899999999999998 79988 9999999987
Q ss_pred CCc
Q 014755 367 QEP 369 (419)
Q Consensus 367 ~~~ 369 (419)
.+.
T Consensus 354 ~~~ 356 (357)
T 3i2n_A 354 LNK 356 (357)
T ss_dssp ---
T ss_pred ccc
Confidence 653
No 79
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.5e-38 Score=288.08 Aligned_cols=284 Identities=12% Similarity=0.233 Sum_probs=245.6
Q ss_pred EEeecCcce-eEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEc
Q 014755 42 QLFSCLDKI-SYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSL 120 (419)
Q Consensus 42 ~~~~~~~~v-~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~ 120 (419)
...+|...+ .++.+ ++++|++++.| |+|++||+.+++.+..+.+|...|.+++|+|++ .+++++.|+ .|++||+
T Consensus 116 ~l~~h~~~v~~~~~~--~~~~l~sgs~d-g~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg-~i~vwd~ 190 (464)
T 3v7d_B 116 TLRGHMTSVITCLQF--EDNYVITGADD-KMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDR-TVRVWDI 190 (464)
T ss_dssp EEECCSSSCEEEEEE--ETTEEEEEETT-SCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTS-CEEEEET
T ss_pred EEcCCCCCcEEEEEE--CCCEEEEEcCC-CcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCC-CEEEEEC
Confidence 344577774 56555 56799999976 899999999999999999999999999999988 899999887 9999999
Q ss_pred CCCeEEE-eccCCCCeeeEEEc--cCCCEEEEEeecCCCCeEEEEeccCCeE-----------------------EEEEe
Q 014755 121 LNTACVH-VQSPKHASKGVAFT--QDGKFAAICTRRDCKDYINLLSCHTWEI-----------------------MGVFA 174 (419)
Q Consensus 121 ~~~~~~~-~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~g~v~i~d~~~~~~-----------------------~~~~~ 174 (419)
++++... +..|...+.+++|+ +++.++++++.| +.|++||+++++. +..+.
T Consensus 191 ~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d---~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (464)
T 3v7d_B 191 KKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRD---NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLR 267 (464)
T ss_dssp TTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETT---SCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEEC
T ss_pred CCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCC---CcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEcc
Confidence 9998887 77899999999998 577899999887 8999999987652 44566
Q ss_pred ccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCC
Q 014755 175 VDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLT 253 (419)
Q Consensus 175 ~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~ 253 (419)
.|...+.++ +++++.+++ ++.++.|++||+ +++.+..+..|.. .|.+++|+|+++++++++.|+.|++||+.+
T Consensus 268 ~~~~~v~~~--~~~~~~l~~--~~~d~~i~vwd~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~ 341 (464)
T 3v7d_B 268 GHMASVRTV--SGHGNIVVS--GSYDNTLIVWDVAQMKCLYILSGHTD--RIYSTIYDHERKRCISASMDTTIRIWDLEN 341 (464)
T ss_dssp CCSSCEEEE--EEETTEEEE--EETTSCEEEEETTTTEEEEEECCCSS--CEEEEEEETTTTEEEEEETTSCEEEEETTT
T ss_pred CccceEEEE--cCCCCEEEE--EeCCCeEEEEECCCCcEEEEecCCCC--CEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Confidence 677777776 577888888 667999999999 8888888877666 899999999999999999999999999999
Q ss_pred ceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCC
Q 014755 254 WKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPK 333 (419)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (419)
++++..+. +|.
T Consensus 342 ~~~~~~~~---------------------------------------------------------------------~h~ 352 (464)
T 3v7d_B 342 GELMYTLQ---------------------------------------------------------------------GHT 352 (464)
T ss_dssp TEEEEEEC---------------------------------------------------------------------CCS
T ss_pred CcEEEEEe---------------------------------------------------------------------CCC
Confidence 88877754 466
Q ss_pred cceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEEec
Q 014755 334 QGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCVSN 413 (419)
Q Consensus 334 ~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~ 413 (419)
..|.+++|+ +++|++++.| |.|++||+.+++......|...+..++|+|++++|++++ ||.|++||+++++++..
T Consensus 353 ~~v~~~~~~--~~~l~s~s~d--g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~ 427 (464)
T 3v7d_B 353 ALVGLLRLS--DKFLVSAAAD--GSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHA 427 (464)
T ss_dssp SCEEEEEEC--SSEEEEEETT--SEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEES
T ss_pred CcEEEEEEc--CCEEEEEeCC--CcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEeh
Confidence 778999997 5799999999 999999999988777667888899999999999999988 89999999999998875
No 80
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2e-38 Score=284.42 Aligned_cols=275 Identities=13% Similarity=0.284 Sum_probs=230.2
Q ss_pred ceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeee--cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEE
Q 014755 49 KISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKID--EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACV 126 (419)
Q Consensus 49 ~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~ 126 (419)
.+..|+||++ +.||+|. | ++|+|||..+++....+. .|...|++++|+|+|++|++++.|+ .|++||+++++.+
T Consensus 107 y~~~l~wS~~-n~lAvgl-d-~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg-~v~iWd~~~~~~~ 182 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL-D-NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA-EVQLWDVQQQKRL 182 (420)
T ss_dssp TCBCEEECTT-SEEEEEE-T-TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS-CEEEEETTTTEEE
T ss_pred cceeEEECCC-CEEEEEe-C-CEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCC-eEEEEEcCCCcEE
Confidence 3577999976 4777775 5 799999999998776654 5667899999999999999999988 9999999999988
Q ss_pred E-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC-CeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEE
Q 014755 127 H-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT-WEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVL 204 (419)
Q Consensus 127 ~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~ 204 (419)
. +..|...+.++++ ++..+++++.+ +.+++||... ...+..+..|...+..+.++|+++.+++ +..|+.++
T Consensus 183 ~~~~~h~~~v~~~s~--~~~~l~sgs~d---~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s--~~~D~~v~ 255 (420)
T 4gga_A 183 RNMTSHSARVGSLSW--NSYILSSGSRS---GHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLAS--GGNDNLVN 255 (420)
T ss_dssp EEECCCSSCEEEEEE--ETTEEEEEETT---SEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEE--EETTSCEE
T ss_pred EEEeCCCCceEEEee--CCCEEEEEeCC---CceeEeeecccceeeEEecccccceeeeeecCCCCeeee--eeccccce
Confidence 8 7788888877766 56789999887 8999999886 4566778899999999999999999998 66799999
Q ss_pred EEcC-CCc----eEEEEeecCCCCceeEEEEccCCC-eEEEE--EecCcEEEEEcCCceeeeeecccccccCCCccceec
Q 014755 205 IYSP-DGR----CLLKYQAYESGLGVKSISWSPCGQ-FLAVG--SYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFK 276 (419)
Q Consensus 205 ~~d~-~~~----~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~--~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (419)
+|+. .++ .+.....+.. .|.+++|+|++. .++++ +.|++|++||+.+++++..+.
T Consensus 256 i~~~~~~~~~~~~~~~~~~~~~--~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~--------------- 318 (420)
T 4gga_A 256 VWPSAPGEGGWVPLQTFTQHQG--AVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD--------------- 318 (420)
T ss_dssp EEESSCCSSCSCCSEEECCCSS--CEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEE---------------
T ss_pred EEeeccccccceeeeeecccCC--ceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeec---------------
Confidence 9998 443 3344444444 899999999765 45544 468999999999998877764
Q ss_pred cCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEec--CC
Q 014755 277 EVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRN--DS 354 (419)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~--~d 354 (419)
+...+.++.|+|+++.+++++ .|
T Consensus 319 -------------------------------------------------------~~~~v~~~~~~~~~~~lv~~sg~~d 343 (420)
T 4gga_A 319 -------------------------------------------------------AHSQVCSILWSPHYKELISGHGFAQ 343 (420)
T ss_dssp -------------------------------------------------------CSSCEEEEEEETTTTEEEEEECTTT
T ss_pred -------------------------------------------------------cccceeeeeecCCCCeEEEEEecCC
Confidence 223478899999999888765 56
Q ss_pred CCceEEEeeccCCCceeec-ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCC
Q 014755 355 MPTTLWIWDICRQEPAAIL-VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGA 408 (419)
Q Consensus 355 ~~~~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~ 408 (419)
+.|+|||+.+++++..+ +|.+.|++++|+|||++||||+.|++|+|||+...
T Consensus 344 --~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 344 --NQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp --CCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCS
T ss_pred --CEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 99999999999988766 59999999999999999999999999999999753
No 81
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-38 Score=271.48 Aligned_cols=279 Identities=13% Similarity=0.075 Sum_probs=234.5
Q ss_pred hcccccC---eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEe-ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC
Q 014755 6 AYKQTGP---SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLF-SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP 80 (419)
Q Consensus 6 ~~~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~ 80 (419)
..+|.+. ++| |++++|++++ ++.|++||+.+++....+ .|...|.+++|+|++++|++++.+ |.|++|++...
T Consensus 14 l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g~i~~~~~~~~ 91 (313)
T 3odt_A 14 LKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKD-TMINGVPLFAT 91 (313)
T ss_dssp ECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETT-SCEEEEETTCC
T ss_pred hhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCC-CeEEEEEeeec
Confidence 3456555 788 9999999998 889999999998877655 489999999999999999999977 89999998765
Q ss_pred ---cceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEcc-CCCEEEEEeecCC
Q 014755 81 ---EWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQ-DGKFAAICTRRDC 155 (419)
Q Consensus 81 ---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~-~~~~l~~~~~~~~ 155 (419)
+....+..|...|.++.| +++.+++++.++ .|++|| .++... +..+...+.+++|.| +++++++++.+
T Consensus 92 ~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~-~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-- 164 (313)
T 3odt_A 92 SGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDK-TAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASAD-- 164 (313)
T ss_dssp TTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTS-EEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETT--
T ss_pred CCCCcccchhhcccCEEEEEe--cCCEEEEEeCCC-CEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECC--
Confidence 456677889999999999 678999999887 999999 445444 778899999999988 88999999887
Q ss_pred CCeEEEEeccCCeEEEEEec-cccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccC
Q 014755 156 KDYINLLSCHTWEIMGVFAV-DTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPC 233 (419)
Q Consensus 156 ~g~v~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~ 233 (419)
+.|++|| ..+....+.. +...+.+++|+|++. +++ ++.++.|++||+ +++.+..+..+.. .+.+++|+|+
T Consensus 165 -~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~--~~~dg~i~i~d~~~~~~~~~~~~~~~--~i~~~~~~~~ 236 (313)
T 3odt_A 165 -KTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FIS--CSNDGLIKLVDMHTGDVLRTYEGHES--FVYCIKLLPN 236 (313)
T ss_dssp -SCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEE--EETTSEEEEEETTTCCEEEEEECCSS--CEEEEEECTT
T ss_pred -CCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEE--ccCCCeEEEEECCchhhhhhhhcCCc--eEEEEEEecC
Confidence 8999999 4566667776 888999999999998 555 567999999999 7888888887666 8999999999
Q ss_pred CCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEe
Q 014755 234 GQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEV 313 (419)
Q Consensus 234 ~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (419)
+ .|++++.|+.|++||+.+++.+..+.
T Consensus 237 ~-~l~~~~~dg~v~iwd~~~~~~~~~~~---------------------------------------------------- 263 (313)
T 3odt_A 237 G-DIVSCGEDRTVRIWSKENGSLKQVIT---------------------------------------------------- 263 (313)
T ss_dssp S-CEEEEETTSEEEEECTTTCCEEEEEE----------------------------------------------------
T ss_pred C-CEEEEecCCEEEEEECCCCceeEEEe----------------------------------------------------
Confidence 9 68999999999999999988776654
Q ss_pred ccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc
Q 014755 314 MEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV 374 (419)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~ 374 (419)
.|...|.+++|+|+++ +++++.| +.|++||+.+++......
T Consensus 264 -----------------~~~~~i~~~~~~~~~~-~~~~~~d--g~i~iw~~~~~~~~~~~~ 304 (313)
T 3odt_A 264 -----------------LPAISIWSVDCMSNGD-IIVGSSD--NLVRIFSQEKSRWASEDE 304 (313)
T ss_dssp -----------------CSSSCEEEEEECTTSC-EEEEETT--SCEEEEESCGGGCCC---
T ss_pred -----------------ccCceEEEEEEccCCC-EEEEeCC--CcEEEEeCCCCceeehhh
Confidence 2555689999999998 5567777 999999999887665543
No 82
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=5.5e-39 Score=291.08 Aligned_cols=296 Identities=13% Similarity=0.181 Sum_probs=229.6
Q ss_pred eecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCc-----------ceeeeecCC------------ccEeEEEECC
Q 014755 44 FSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPE-----------WTCKIDEGL------------AGIAYARWSP 100 (419)
Q Consensus 44 ~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~-----------~~~~~~~~~------------~~v~~~~~~~ 100 (419)
+.+.+.|.+++|+|+|++||+|+.| |.|+||++.+++ ....+.+|. ..|.+++|+|
T Consensus 25 ~~~~~~V~~v~~s~~g~~la~g~~d-g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~ 103 (447)
T 3dw8_B 25 VAEADIISTVEFNHSGELLATGDKG-GRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLP 103 (447)
T ss_dssp CCGGGSEEEEEECSSSSEEEEEETT-SEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECC
T ss_pred ccccCcEEEEEECCCCCEEEEEcCC-CeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcC
Confidence 3467899999999999999999977 899999999876 466788898 8899999999
Q ss_pred CC--CEEEEEecCCCeEEEEEcCCCeEE----------------------------------------E-eccCCCCeee
Q 014755 101 DS--RHILTTSDFQLRLTVWSLLNTACV----------------------------------------H-VQSPKHASKG 137 (419)
Q Consensus 101 ~~--~~l~~~~~~~~~i~iwd~~~~~~~----------------------------------------~-~~~~~~~~~~ 137 (419)
++ ..|++++.|+ .|++||+.+++.. . ...|...+.+
T Consensus 104 ~~~~~~l~s~s~d~-~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 182 (447)
T 3dw8_B 104 QKNAAQFLLSTNDK-TIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINS 182 (447)
T ss_dssp CCSSSEEEEEECSS-CEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCE
T ss_pred CCCcceEEEeCCCC-eEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEE
Confidence 98 7899999887 9999999875432 1 3568889999
Q ss_pred EEEccCCCEEEEEeecCCCCeEEEEeccC-CeEEEE-------EeccccceeeeeECCCC-CeEEEEcCCCCceEEEEcC
Q 014755 138 VAFTQDGKFAAICTRRDCKDYINLLSCHT-WEIMGV-------FAVDTLDLADIEWSPDD-SAIVIWDSPLEYKVLIYSP 208 (419)
Q Consensus 138 ~~~~~~~~~l~~~~~~~~~g~v~i~d~~~-~~~~~~-------~~~~~~~v~~~~~~~~~-~~l~~~~~~~~~~i~~~d~ 208 (419)
++|+|++++|+++ .| +.|++||+++ ++.... +..|...|.+++|+|++ +.+++ ++.|+.|++||+
T Consensus 183 ~~~~~~~~~l~s~-~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s--~~~dg~i~iwd~ 256 (447)
T 3dw8_B 183 ISINSDYETYLSA-DD---LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVY--SSSKGTIRLCDM 256 (447)
T ss_dssp EEECTTSSEEEEE-CS---SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEE--EETTSCEEEEET
T ss_pred EEEcCCCCEEEEe-CC---CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEE--EeCCCeEEEEEC
Confidence 9999999999998 55 8999999984 444442 45788899999999998 88888 667999999999
Q ss_pred -CCce----EEEEeecCCC----------CceeEEEEccCCCeEEEEEecCcEEEEEcCC-ceeeeeec-ccccccCCCc
Q 014755 209 -DGRC----LLKYQAYESG----------LGVKSISWSPCGQFLAVGSYDQTLRVLNHLT-WKTFAEFM-HLSTVRGPCF 271 (419)
Q Consensus 209 -~~~~----~~~~~~~~~~----------~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~-~~~~~~~~-~~~~~~~~~~ 271 (419)
+++. +..+..+... ..|.+++|+|++++|++++. +.|++||+.+ ++++..+. |...... .
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~-l- 333 (447)
T 3dw8_B 257 RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSK-L- 333 (447)
T ss_dssp TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTT-H-
T ss_pred cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccc-c-
Confidence 6655 5667665421 26999999999999999998 9999999987 77776665 3211100 0
Q ss_pred cceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEe
Q 014755 272 PAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTR 351 (419)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 351 (419)
...+.. .....+..++|+|++++|+++
T Consensus 334 ~~~~~~-----------------------------------------------------~~i~~~~~~~~s~~~~~l~s~ 360 (447)
T 3dw8_B 334 CSLYEN-----------------------------------------------------DCIFDKFECCWNGSDSVVMTG 360 (447)
T ss_dssp HHHHHT-----------------------------------------------------SGGGCCCCEEECTTSSEEEEE
T ss_pred cccccc-----------------------------------------------------cccccceEEEECCCCCEEEEe
Confidence 000000 000013458999999999999
Q ss_pred cCCCCceEEEeeccCCCceeec---------------------------------ccCCCeeEEEeCCCCCeEEEEeCCC
Q 014755 352 NDSMPTTLWIWDICRQEPAAIL---------------------------------VQKDPIRAATWDPTCTRLVLCTGSS 398 (419)
Q Consensus 352 ~~d~~~~i~iwd~~~~~~~~~~---------------------------------~~~~~v~~~~~s~~~~~l~s~~~dg 398 (419)
+.| +.|++||+.+++...+. .+...|..++|+|++++||+++.++
T Consensus 361 s~d--g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~ 438 (447)
T 3dw8_B 361 SYN--NFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN 438 (447)
T ss_dssp CST--TEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC
T ss_pred ccC--CEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce
Confidence 999 99999999998776533 2345788999999999999988775
Q ss_pred cEEEeecC
Q 014755 399 HLYMWTPS 406 (419)
Q Consensus 399 ~i~vw~~~ 406 (419)
+++|.-+
T Consensus 439 -~~~~~~~ 445 (447)
T 3dw8_B 439 -LYIFQDK 445 (447)
T ss_dssp -EEEEECC
T ss_pred -eeeeccc
Confidence 7888643
No 83
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2e-39 Score=292.20 Aligned_cols=282 Identities=12% Similarity=0.141 Sum_probs=220.1
Q ss_pred cCeEEcC-CCCEEEEEe-CCeEEEEecCCCcEEE---EeecCcceeEEEEec-CCCeEEEEeccCCeEEEEEccCCccee
Q 014755 11 GPSCFSP-NARYIAVAV-DYRLVVRDAHSFKVVQ---LFSCLDKISYIEWAL-DSEYILCGLYKRLMIQAWSLTQPEWTC 84 (419)
Q Consensus 11 ~~~~~s~-d~~~la~~~-~~~i~i~~~~~~~~~~---~~~~~~~v~~~~~s~-~~~~l~~~~~~~g~i~iw~~~~~~~~~ 84 (419)
.+++|+| ++++||+|+ |+.|+|||+.+++... ..+|.+.|++|+|+| ++++|++++.| |+|++||++++....
T Consensus 123 ~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D-~~v~iwd~~~~~~~~ 201 (435)
T 4e54_B 123 TSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME-GTTRLQDFKGNILRV 201 (435)
T ss_dssp EEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS-SCEEEEETTSCEEEE
T ss_pred EEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC-CEEEEeeccCCceeE
Confidence 3489999 678999998 8999999998776443 335999999999998 68899999977 899999998765433
Q ss_pred eeecC--CccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCC-EEEEEeecCCCCeEEE
Q 014755 85 KIDEG--LAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGK-FAAICTRRDCKDYINL 161 (419)
Q Consensus 85 ~~~~~--~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~g~v~i 161 (419)
....+ ...+.+++|+|++++|++++.++ .|++||+++.....+..|...|.+++|+|++. ++++++.| +.|++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg-~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d---~~v~i 277 (435)
T 4e54_B 202 FASSDTINIWFCSLDVSASSRMVVTGDNVG-NVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVD---QTVKI 277 (435)
T ss_dssp EECCSSCSCCCCCEEEETTTTEEEEECSSS-BEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETT---SBCCE
T ss_pred EeccCCCCccEEEEEECCCCCEEEEEeCCC-cEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCc---ceeeE
Confidence 33222 34578999999999999999987 99999998766555888999999999999986 56677776 89999
Q ss_pred EeccCCeEEEE---EeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCC----CceeEEEEccC
Q 014755 162 LSCHTWEIMGV---FAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESG----LGVKSISWSPC 233 (419)
Q Consensus 162 ~d~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~----~~v~~~~~s~~ 233 (419)
||+++.+.... ...|...|.+++|+|++++|++ ++.|+.|++||+ ++.....+..+... ..+....|+|+
T Consensus 278 wd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s--~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (435)
T 4e54_B 278 WDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLT--TDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPR 355 (435)
T ss_dssp EETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEE--EESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSS
T ss_pred EecccccccceEEEeeeccccccceeECCCCCeeEE--EcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCC
Confidence 99988654433 3568889999999999999998 677999999999 77777777655432 12445678888
Q ss_pred CCeEEEEEe------------cCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCcccccccc
Q 014755 234 GQFLAVGSY------------DQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSD 301 (419)
Q Consensus 234 ~~~l~~~~~------------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (419)
+..+++++. ++.|++||..+++.+..+..
T Consensus 356 ~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~--------------------------------------- 396 (435)
T 4e54_B 356 YNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYD--------------------------------------- 396 (435)
T ss_dssp SSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECC---------------------------------------
T ss_pred CCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeC---------------------------------------
Confidence 887777642 35799999999887766531
Q ss_pred ccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEE-EEccCCeEEEEecCCCCceEEEeeccCCCce
Q 014755 302 ATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLM-SWSSDSQYICTRNDSMPTTLWIWDICRQEPA 370 (419)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~ 370 (419)
.|...|.++ +|+|+|++||+|+ | +.|+||++++++..
T Consensus 397 -----------------------------~~~~~v~s~~~fspdg~~lasg~-d--~~i~iW~~~~gk~r 434 (435)
T 4e54_B 397 -----------------------------PESSGISSLNEFNPMGDTLASAM-G--YHILIWSQQEARTR 434 (435)
T ss_dssp -----------------------------SSCCCCCCEEEECTTSSCEEEEC-S--SEEEECCCC-----
T ss_pred -----------------------------CCCCcEEEEEEECCCCCEEEEEc-C--CcEEEEECCcCeee
Confidence 245556666 6999999999987 5 89999999988753
No 84
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2e-38 Score=270.80 Aligned_cols=252 Identities=15% Similarity=0.260 Sum_probs=205.3
Q ss_pred eeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCC--eEEE-eccCCCCeeeEEEccC--CCEEEEEeecCCCCe
Q 014755 84 CKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNT--ACVH-VQSPKHASKGVAFTQD--GKFAAICTRRDCKDY 158 (419)
Q Consensus 84 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~--~~~~-~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~g~ 158 (419)
..+.+|...|.+++|+|+|++|++++.|+ .|++||+.++ +... +.+|...|.+++|+++ +++|++++.| ++
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~-~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D---~~ 78 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDK-TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD---GK 78 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTS-CEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT---TE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCC-EEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCC---CE
Confidence 35678999999999999999999999988 9999999753 3333 7889999999999864 8999999987 89
Q ss_pred EEEEeccCCe--EEEEEeccccceeeeeECCC--CCeEEEEcCCCCceEEEEcC-CCc--eEEEEeecCCCCceeEEEEc
Q 014755 159 INLLSCHTWE--IMGVFAVDTLDLADIEWSPD--DSAIVIWDSPLEYKVLIYSP-DGR--CLLKYQAYESGLGVKSISWS 231 (419)
Q Consensus 159 v~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~~~i~~~d~-~~~--~~~~~~~~~~~~~v~~~~~s 231 (419)
|++||+++++ .+..+..|...|.+++|+|+ +.++++ ++.|+.|++||+ ++. ....+..|.. .|.+++|+
T Consensus 79 v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s--~s~d~~v~~wd~~~~~~~~~~~~~~h~~--~v~~~~~~ 154 (297)
T 2pm7_B 79 VMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLV--ASSDGKVSVVEFKENGTTSPIIIDAHAI--GVNSASWA 154 (297)
T ss_dssp EEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEE--EETTSEEEEEEBCSSSCBCCEEEECCSS--CEEEEEEC
T ss_pred EEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEE--EECCCcEEEEEecCCCceeeeeeecccC--ccceEeec
Confidence 9999998864 55667788899999999998 788888 667999999999 332 2344555554 89999999
Q ss_pred cC-------------CCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccc
Q 014755 232 PC-------------GQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQG 298 (419)
Q Consensus 232 ~~-------------~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (419)
|+ +++|++++.|++|++||+++++....+..
T Consensus 155 p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~------------------------------------ 198 (297)
T 2pm7_B 155 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLES------------------------------------ 198 (297)
T ss_dssp CCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEE------------------------------------
T ss_pred CCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEE------------------------------------
Confidence 97 57999999999999999876542111100
Q ss_pred cccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCC---eEEEEecCCCCceEEEeeccCCCc---eee
Q 014755 299 NSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDS---QYICTRNDSMPTTLWIWDICRQEP---AAI 372 (419)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g---~~l~~~~~d~~~~i~iwd~~~~~~---~~~ 372 (419)
.+.+|...|.+++|+|++ ++||+++.| ++|+|||+++.+. ...
T Consensus 199 -----------------------------~l~~H~~~V~~v~~sp~~~~~~~las~s~D--~~v~iWd~~~~~~~~~~~~ 247 (297)
T 2pm7_B 199 -----------------------------TLEGHSDWVRDVAWSPTVLLRSYMASVSQD--RTCIIWTQDNEQGPWKKTL 247 (297)
T ss_dssp -----------------------------EECCCSSCEEEEEECCCCSSSEEEEEEETT--SCEEEEEESSTTSCCEEEE
T ss_pred -----------------------------EecCCCCceEEEEECCCCCCceEEEEEECC--CcEEEEEeCCCCCccceee
Confidence 022588899999999994 899999999 9999999987531 122
Q ss_pred c---ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecC-CCeE
Q 014755 373 L---VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPS-GAYC 410 (419)
Q Consensus 373 ~---~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~-~~~~ 410 (419)
+ +|...|++++|+|++++||+++.||+|++|+.. .+..
T Consensus 248 ~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~g~w 289 (297)
T 2pm7_B 248 LKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKW 289 (297)
T ss_dssp SSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCE
T ss_pred eecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCCCcE
Confidence 2 478899999999999999999999999999987 4433
No 85
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.1e-38 Score=278.72 Aligned_cols=285 Identities=8% Similarity=0.004 Sum_probs=236.6
Q ss_pred ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCc---ceeeeecCCccEeEEEECCCCC-EEEEEecCCCeEEEEEc
Q 014755 45 SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPE---WTCKIDEGLAGIAYARWSPDSR-HILTTSDFQLRLTVWSL 120 (419)
Q Consensus 45 ~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~---~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~~i~iwd~ 120 (419)
.|.+.|.+++|+|++++|++++.| |.|++|++.+++ ....+..|...|.+++|+|+++ +|++++.++ .|++||+
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d-~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-~i~~wd~ 86 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWD-GSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQG-EILKVDL 86 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETT-SEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTS-CEEEECS
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCC-CeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCC-eEEEEEe
Confidence 488999999999999999999977 899999999887 2445668999999999999999 999999887 9999999
Q ss_pred -CCCeEEEecc--CCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC---------CeEEEEEeccccceeeeeECCC
Q 014755 121 -LNTACVHVQS--PKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT---------WEIMGVFAVDTLDLADIEWSPD 188 (419)
Q Consensus 121 -~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~---------~~~~~~~~~~~~~v~~~~~~~~ 188 (419)
.+++...+.. |...+.+++|+| ++++++++.+ +.|++||+++ ++.+..+. +...+.+++|+|+
T Consensus 87 ~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~ 161 (342)
T 1yfq_A 87 IGSPSFQALTNNEANLGICRICKYG-DDKLIAASWD---GLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSS 161 (342)
T ss_dssp SSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETT---SEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSS
T ss_pred ccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCC---CeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCC
Confidence 9888877888 999999999999 9999999987 8999999987 66666665 7789999999998
Q ss_pred CCeEEEEcCCCCceEEEEcC-C-CceEEEEeecCCCCceeEEEEcc-CCCeEEEEEecCcEEEEEcCCc------eeeee
Q 014755 189 DSAIVIWDSPLEYKVLIYSP-D-GRCLLKYQAYESGLGVKSISWSP-CGQFLAVGSYDQTLRVLNHLTW------KTFAE 259 (419)
Q Consensus 189 ~~~l~~~~~~~~~~i~~~d~-~-~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~v~d~~~~------~~~~~ 259 (419)
+ +++ +..++.|++||+ . +..........+...+.+++|+| +++++++++.||.|++|++... +....
T Consensus 162 ~--l~~--~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 237 (342)
T 1yfq_A 162 R--LIV--GMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFA 237 (342)
T ss_dssp E--EEE--EESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEE
T ss_pred c--EEE--EeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccccccccee
Confidence 8 555 566899999999 4 44322222223334899999999 9999999999999999999875 44444
Q ss_pred ec-ccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEE
Q 014755 260 FM-HLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGL 338 (419)
Q Consensus 260 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 338 (419)
+. |.... ....|...|.+
T Consensus 238 ~~~~~~~~-------------------------------------------------------------~~~~~~~~i~~ 256 (342)
T 1yfq_A 238 FRCHRLNL-------------------------------------------------------------KDTNLAYPVNS 256 (342)
T ss_dssp EECCCCCT-------------------------------------------------------------TCCSSCCCEEE
T ss_pred eecccccc-------------------------------------------------------------cccccceeEEE
Confidence 33 11100 01136668999
Q ss_pred EEEccCCeEEEEecCCCCceEEEeeccCCCceeec-cc-CCCeeEEEeCCCCCeEEEEeCCCc-EEEeec
Q 014755 339 MSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL-VQ-KDPIRAATWDPTCTRLVLCTGSSH-LYMWTP 405 (419)
Q Consensus 339 ~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~-~~-~~~v~~~~~s~~~~~l~s~~~dg~-i~vw~~ 405 (419)
++|+|++++|++++.| |.|++||+.+++++..+ +| ..+|++++ |++++|++++.||. .+.|..
T Consensus 257 ~~~s~~~~~l~~~~~d--g~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~~ 322 (342)
T 1yfq_A 257 IEFSPRHKFLYTAGSD--GIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAAI 322 (342)
T ss_dssp EEECTTTCCEEEEETT--SCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSSS
T ss_pred EEEcCCCCEEEEecCC--ceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCcccccccc
Confidence 9999999999999998 99999999999887766 47 99999999 99999999999999 666663
No 86
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-38 Score=287.10 Aligned_cols=314 Identities=10% Similarity=0.120 Sum_probs=234.4
Q ss_pred cccccC---eEEcC-CCCEEEEEe-CCeEEEEecCC---Cc---EEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEE
Q 014755 7 YKQTGP---SCFSP-NARYIAVAV-DYRLVVRDAHS---FK---VVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAW 75 (419)
Q Consensus 7 ~~~~~~---~~~s~-d~~~la~~~-~~~i~i~~~~~---~~---~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw 75 (419)
.+|.+. ++|+| ++++||+++ |+.|+|||+.+ +. ....+.|...|.+++|+|++++|++++.| |.|++|
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d-g~i~vw 138 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKD-GQIIVL 138 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETT-SEEEEE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCC-CEEEEE
Confidence 355444 89999 999999998 89999999876 33 34455799999999999999999999977 899999
Q ss_pred Ecc---CCcceeeeec------------CCccEeEEE--ECCCCCEEEEEecCCCeEEEEEcCCCeEEE-ecc--CCCCe
Q 014755 76 SLT---QPEWTCKIDE------------GLAGIAYAR--WSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQS--PKHAS 135 (419)
Q Consensus 76 ~~~---~~~~~~~~~~------------~~~~v~~~~--~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~--~~~~~ 135 (419)
|++ +++....... +...+.++. ++++++++++++.++ .|++||+++++... +.. |...+
T Consensus 139 d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~h~~~v 217 (437)
T 3gre_A 139 KVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLS-RVIIFDIRTLERLQIIENSPRHGAV 217 (437)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTS-EEEEEETTTCCEEEEEECCGGGCCE
T ss_pred EeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCC-eEEEEeCCCCeeeEEEccCCCCCce
Confidence 995 5544433322 344566666 668899999999988 99999999988877 555 67899
Q ss_pred eeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEe-ccccceeeeeEC----CCCCeEEEEcCCCCceEEEEcC-C
Q 014755 136 KGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFA-VDTLDLADIEWS----PDDSAIVIWDSPLEYKVLIYSP-D 209 (419)
Q Consensus 136 ~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~-~~~~~v~~~~~~----~~~~~l~~~~~~~~~~i~~~d~-~ 209 (419)
.+++|+|++++|++++.| |.|++||+++++.+..+. .|...|.+++|+ |++.++++ ++.|+.|++||+ +
T Consensus 218 ~~~~~s~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s--~~~dg~i~iwd~~~ 292 (437)
T 3gre_A 218 SSICIDEECCVLILGTTR---GIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVG--GSSKTFLTIWNFVK 292 (437)
T ss_dssp EEEEECTTSCEEEEEETT---SCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEE--ESTTEEEEEEETTT
T ss_pred EEEEECCCCCEEEEEcCC---CeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEE--EcCCCcEEEEEcCC
Confidence 999999999999999987 899999999999998886 677889999554 56778887 677999999999 7
Q ss_pred CceEEEEeecC------------------------CCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeec-ccc
Q 014755 210 GRCLLKYQAYE------------------------SGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFM-HLS 264 (419)
Q Consensus 210 ~~~~~~~~~~~------------------------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~ 264 (419)
++.+..+..+. +...|.+++|+ ++++|++++.|+.|++||+.+++....+. +..
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~ 371 (437)
T 3gre_A 293 GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSR 371 (437)
T ss_dssp TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--
T ss_pred CcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccc
Confidence 88888777543 33468899999 77999999999999999999998887775 221
Q ss_pred cccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccC
Q 014755 265 TVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSD 344 (419)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 344 (419)
.. ..|.. ..+... ....+.. ..............|...|++++|+++
T Consensus 372 ~~------~~~~~-----------~~~~~~------------~~~~~~~----~~~~~~~~~~~~~~h~~~I~~i~~~~~ 418 (437)
T 3gre_A 372 FS------DVFIP-----------TQVTAN------------LTMLLRK----MKRTSTHSVDDSLYHHDIINSISTCEV 418 (437)
T ss_dssp CC------CEEEE-----------EEEETT------------EEEEEEE----CC-------------CCCEEEEEEEES
T ss_pred cC------ceEEE-----------EEeecc------------eEEEEEe----cccccccccCcccccccceeeEeeecc
Confidence 11 11110 000000 0000000 000001111223458999999999998
Q ss_pred --CeEEEEecCCCCceEEEee
Q 014755 345 --SQYICTRNDSMPTTLWIWD 363 (419)
Q Consensus 345 --g~~l~~~~~d~~~~i~iwd 363 (419)
+.+|++|+.| |.|+||+
T Consensus 419 ~~~~~l~s~~~d--G~I~iw~ 437 (437)
T 3gre_A 419 DETPLLVACDNS--GLIGIFQ 437 (437)
T ss_dssp SSSEEEEEEETT--SCEEEEC
T ss_pred CCceEEEEEcCC--ceEEEeC
Confidence 8899999999 9999995
No 87
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=2.9e-38 Score=282.74 Aligned_cols=319 Identities=11% Similarity=0.163 Sum_probs=226.0
Q ss_pred ccccC---eEEcC-CCCEEEEEe-CCeEEEEecCCCcEEEEe--------------ecCcceeEEEEec-CCCeEEEEec
Q 014755 8 KQTGP---SCFSP-NARYIAVAV-DYRLVVRDAHSFKVVQLF--------------SCLDKISYIEWAL-DSEYILCGLY 67 (419)
Q Consensus 8 ~~~~~---~~~s~-d~~~la~~~-~~~i~i~~~~~~~~~~~~--------------~~~~~v~~~~~s~-~~~~l~~~~~ 67 (419)
+|.+. ++|+| ++++||+++ ++.|++||+.+++....+ .|...|.+++|+| ++++|++++.
T Consensus 41 ~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~ 120 (408)
T 4a11_B 41 IHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSF 120 (408)
T ss_dssp CCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEET
T ss_pred ccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeC
Confidence 45554 89999 999999998 889999999987654433 2889999999999 7789999987
Q ss_pred cCCeEEEEEccCCcceeeeecCCccEeEEEECCCC---CEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccC
Q 014755 68 KRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDS---RHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQD 143 (419)
Q Consensus 68 ~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~ 143 (419)
+ |.|++||+.+++....+. +...+.++.|+|.+ ..+++++.++ .|++||+++++... +..+...+.+++|+|+
T Consensus 121 d-~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~ 197 (408)
T 4a11_B 121 D-KTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGP-KVQLCDLKSGSCSHILQGHRQEILAVSWSPR 197 (408)
T ss_dssp T-SEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSS-SEEEEESSSSCCCEEECCCCSCEEEEEECSS
T ss_pred C-CeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCC-eEEEEeCCCcceeeeecCCCCcEEEEEECCC
Confidence 6 899999999998776664 77789999999854 4899988887 99999999987766 7788999999999999
Q ss_pred CCE-EEEEeecCCCCeEEEEeccCCe-EEEEE---------------eccccceeeeeECCCCCeEEEEcCCCCceEEEE
Q 014755 144 GKF-AAICTRRDCKDYINLLSCHTWE-IMGVF---------------AVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIY 206 (419)
Q Consensus 144 ~~~-l~~~~~~~~~g~v~i~d~~~~~-~~~~~---------------~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~ 206 (419)
+++ +++++.+ |.|++||++++. .+..+ ..|...|.+++|+|+++++++ ++.++.|++|
T Consensus 198 ~~~ll~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~dg~i~vw 272 (408)
T 4a11_B 198 YDYILATASAD---SRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLT--VGTDNRMRLW 272 (408)
T ss_dssp CTTEEEEEETT---SCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEE--EETTSCEEEE
T ss_pred CCcEEEEEcCC---CcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEE--ecCCCeEEEE
Confidence 985 7788776 899999998765 33333 457788999999999999998 6679999999
Q ss_pred cC-CCceEEEEeecCCC---CceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcc
Q 014755 207 SP-DGRCLLKYQAYESG---LGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPL 282 (419)
Q Consensus 207 d~-~~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (419)
|+ +++.......+... ..+........+..+++++.++.|++||+.+++++..+.
T Consensus 273 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~--------------------- 331 (408)
T 4a11_B 273 NSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLK--------------------- 331 (408)
T ss_dssp ETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEEC---------------------
T ss_pred ECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeec---------------------
Confidence 99 66544333222111 122222233345677888889999999999988877653
Q ss_pred cccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEe
Q 014755 283 QLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIW 362 (419)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iw 362 (419)
+|...|++++|+|++++|++++.| |.|++|
T Consensus 332 ------------------------------------------------~~~~~v~~~~~s~~~~~l~s~~~d--g~i~iw 361 (408)
T 4a11_B 332 ------------------------------------------------GHYKTVDCCVFQSNFQELYSGSRD--CNILAW 361 (408)
T ss_dssp ------------------------------------------------CCSSCEEEEEEETTTTEEEEEETT--SCEEEE
T ss_pred ------------------------------------------------cCCCeEEEEEEcCCCCEEEEECCC--CeEEEE
Confidence 477779999999999999999999 999999
Q ss_pred eccCCCceeecccCCCeeEEEeCC-CCCeEEEEeCCCcEEEeecCC
Q 014755 363 DICRQEPAAILVQKDPIRAATWDP-TCTRLVLCTGSSHLYMWTPSG 407 (419)
Q Consensus 363 d~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~i~vw~~~~ 407 (419)
|+.+++.+......... ..+.+ ....+.+++.|+.+++|+...
T Consensus 362 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~W~~~~ 405 (408)
T 4a11_B 362 VPSLYEPVPDDDETTTK--SQLNPAFEDAWSSSDEEGGTSAWSHPQ 405 (408)
T ss_dssp EECC------------------------------------------
T ss_pred eCCCCCccCCCCceEec--cccccccceeecccCccCceeecCCcc
Confidence 99998876554322222 23333 233456677899999998753
No 88
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=3e-37 Score=266.73 Aligned_cols=274 Identities=13% Similarity=0.261 Sum_probs=224.8
Q ss_pred eeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeee--cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE
Q 014755 50 ISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKID--EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH 127 (419)
Q Consensus 50 v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~ 127 (419)
..+|+||+++ +||+|. | ++|+|||+++++.+..+. .|...|.+++|+|++++|++++.|+ .|++||+++++.+.
T Consensus 28 ~~~l~WS~~~-~lAvg~-D-~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg-~v~iw~~~~~~~~~ 103 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL-D-NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA-EVQLWDVQQQKRLR 103 (318)
T ss_dssp CBCEEECTTS-EEEEEE-T-TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS-EEEEEETTTTEEEE
T ss_pred ceEEEECCCC-EEEEEe-C-CEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCC-cEEEeecCCceeEE
Confidence 5789999986 777765 6 799999999999877665 5667899999999999999999988 99999999999887
Q ss_pred -eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCC-eEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEE
Q 014755 128 -VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTW-EIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLI 205 (419)
Q Consensus 128 -~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~ 205 (419)
+..|...+.+ +++++..+++++.+ +.+++|+.... ..+..+..|...+..+.++++++++++ +..|+.|++
T Consensus 104 ~~~~h~~~~~~--~~~~~~~l~s~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s--~~~d~~i~i 176 (318)
T 4ggc_A 104 NMTSHSARVGS--LSWNSYILSSGSRS---GHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLAS--GGNDNLVNV 176 (318)
T ss_dssp EEECCSSCEEE--EEEETTEEEEEETT---SEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEE--EETTSCEEE
T ss_pred EecCccceEEE--eecCCCEEEEEecC---CceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEE--EecCcceeE
Confidence 7777666655 45567889998876 89999998774 566778889999999999999999988 667999999
Q ss_pred EcC-CCce----EEEEeecCCCCceeEEEEccCCCeE---EEEEecCcEEEEEcCCceeeeeecccccccCCCccceecc
Q 014755 206 YSP-DGRC----LLKYQAYESGLGVKSISWSPCGQFL---AVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKE 277 (419)
Q Consensus 206 ~d~-~~~~----~~~~~~~~~~~~v~~~~~s~~~~~l---~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (419)
||+ +++. ......+ ...|.+++++|++..+ ++++.+++|++||...........
T Consensus 177 wd~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~---------------- 238 (318)
T 4ggc_A 177 WPSAPGEGGWVPLQTFTQH--QGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD---------------- 238 (318)
T ss_dssp EESSCBTTBSCCSEEECCC--CSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE----------------
T ss_pred EECCCCcccccceeeeccc--CCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc----------------
Confidence 999 4432 2233333 3379999999987644 345678899999988766554432
Q ss_pred CCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEec--CCC
Q 014755 278 VDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRN--DSM 355 (419)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~--~d~ 355 (419)
+...+..+.|+|+++.+++++ .|
T Consensus 239 ------------------------------------------------------~~~~v~~~~~~~~~~~~~~~sg~~d- 263 (318)
T 4ggc_A 239 ------------------------------------------------------AHSQVCSILWSPHYKELISGHGFAQ- 263 (318)
T ss_dssp ------------------------------------------------------CSSCEEEEEEETTTTEEEEEECTTT-
T ss_pred ------------------------------------------------------ceeeeeeeeecccccceEEEEEcCC-
Confidence 344578899999998887664 56
Q ss_pred CceEEEeeccCCCceeec-ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCC
Q 014755 356 PTTLWIWDICRQEPAAIL-VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGA 408 (419)
Q Consensus 356 ~~~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~ 408 (419)
+.|+|||+.+++++..+ +|.+.|++++|+||+++|||++.||+|+|||+...
T Consensus 264 -~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 264 -NQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp -CCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred -CEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 99999999999988776 59999999999999999999999999999999754
No 89
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=4.3e-38 Score=277.65 Aligned_cols=303 Identities=11% Similarity=0.137 Sum_probs=238.0
Q ss_pred EecCCCcEEEEe-ecCcceeEEEEecC---CCeEEEEeccCCeEEEEEccC-Ccce-eeeecCCccEeEEEECCCCCEEE
Q 014755 33 RDAHSFKVVQLF-SCLDKISYIEWALD---SEYILCGLYKRLMIQAWSLTQ-PEWT-CKIDEGLAGIAYARWSPDSRHIL 106 (419)
Q Consensus 33 ~~~~~~~~~~~~-~~~~~v~~~~~s~~---~~~l~~~~~~~g~i~iw~~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~l~ 106 (419)
++....+.+..+ .|.+.|.+++|+|+ |++|++++.| |.|++||+.+ +... ..+..|...|.+++|+|++++|+
T Consensus 24 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~d-g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 102 (368)
T 3mmy_A 24 DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWA-NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVF 102 (368)
T ss_dssp CSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETT-SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEE
T ss_pred CCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCC-CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEE
Confidence 344555556554 49999999999999 6999999976 8999999997 4444 67788999999999999999999
Q ss_pred EEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEE--ccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeee
Q 014755 107 TTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAF--TQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIE 184 (419)
Q Consensus 107 ~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~ 184 (419)
+++.++ .|++||+++++...+..+...+.+++| +|++++|++++.| |.|++||+++++.+..+..+. .+.++.
T Consensus 103 s~~~dg-~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d---g~i~vwd~~~~~~~~~~~~~~-~~~~~~ 177 (368)
T 3mmy_A 103 TASCDK-TAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWD---KTLKFWDTRSSNPMMVLQLPE-RCYCAD 177 (368)
T ss_dssp EEETTS-EEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETT---SEEEEECSSCSSCSEEEECSS-CEEEEE
T ss_pred EEcCCC-cEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCC---CcEEEEECCCCcEEEEEecCC-CceEEE
Confidence 999988 999999999998888889999999999 8999999999987 899999999998888887664 566666
Q ss_pred ECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCe----EEEEEecCcEEEEEcCCce---e
Q 014755 185 WSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQF----LAVGSYDQTLRVLNHLTWK---T 256 (419)
Q Consensus 185 ~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~----l~~~~~d~~i~v~d~~~~~---~ 256 (419)
+.+ ..+++ +..++.+.+|++ ................+.++++.++... +++++.|+.|++||+.... .
T Consensus 178 ~~~--~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~ 253 (368)
T 3mmy_A 178 VIY--PMAVV--ATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKD 253 (368)
T ss_dssp EET--TEEEE--EEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHH
T ss_pred ecC--CeeEE--EeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcccc
Confidence 654 35555 455899999999 3333222222222235677777766655 9999999999999998763 3
Q ss_pred eeeec-ccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcc
Q 014755 257 FAEFM-HLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQG 335 (419)
Q Consensus 257 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (419)
+..+. |.... .......|...
T Consensus 254 ~~~~~~~~~~~----------------------------------------------------------~~~~~~~~~~~ 275 (368)
T 3mmy_A 254 NFTFKCHRSNG----------------------------------------------------------TNTSAPQDIYA 275 (368)
T ss_dssp SEEEECSEEC--------------------------------------------------------------CCCEEECC
T ss_pred ceeeeeeeccc----------------------------------------------------------ccccccccccc
Confidence 33332 11100 00001235557
Q ss_pred eEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec-ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeec
Q 014755 336 IGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL-VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTP 405 (419)
Q Consensus 336 v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 405 (419)
|++++|+|++++|++++.| |.|++||+.+++++..+ +|...|++++|+|++++|++++.|+..+.|++
T Consensus 276 v~~~~~sp~~~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 276 VNGIAFHPVHGTLATVGSD--GRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp EEEEEECTTTCCEEEEETT--SCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGG
T ss_pred eEEEEEecCCCEEEEEccC--CeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccccccccc
Confidence 9999999999999999999 99999999999887776 49999999999999999999999886655554
No 90
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.9e-39 Score=287.30 Aligned_cols=233 Identities=13% Similarity=0.157 Sum_probs=189.4
Q ss_pred ccCeEEcCCCCEEEEEe-CCeEEEEecCCC--cEEEEe-ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCc---c
Q 014755 10 TGPSCFSPNARYIAVAV-DYRLVVRDAHSF--KVVQLF-SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPE---W 82 (419)
Q Consensus 10 ~~~~~~s~d~~~la~~~-~~~i~i~~~~~~--~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~---~ 82 (419)
...++|+|||++||+++ ++.|+|||+.++ +.+..+ .|...|.+++|+|++++|++++.| ++|++||+.+++ .
T Consensus 14 v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d-~~v~vwd~~~~~~~~~ 92 (377)
T 3dwl_C 14 SYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD-RNAYVYEKRPDGTWKQ 92 (377)
T ss_dssp CSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT-SSEEEC------CCCC
T ss_pred EEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC-CeEEEEEcCCCCceee
Confidence 34489999999999996 889999999988 444444 489999999999999999999977 899999999887 5
Q ss_pred eeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeE----EEecc-CCCCeeeEEEccCCCEEEEEeecCCCC
Q 014755 83 TCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTAC----VHVQS-PKHASKGVAFTQDGKFAAICTRRDCKD 157 (419)
Q Consensus 83 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~----~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~g 157 (419)
...+..|...|.+++|+|++++|++++.++ .|++||+++++. ..+.. |...+.+++|+|++++|++++.| +
T Consensus 93 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d---~ 168 (377)
T 3dwl_C 93 TLVLLRLNRAATFVRWSPNEDKFAVGSGAR-VISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCAD---R 168 (377)
T ss_dssp EEECCCCSSCEEEEECCTTSSCCEEEESSS-CEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESS---S
T ss_pred eeEecccCCceEEEEECCCCCEEEEEecCC-eEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCC---C
Confidence 666778999999999999999999999988 999999998763 33565 88999999999999999999987 8
Q ss_pred eEEEEecc------------------CCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCce----EE
Q 014755 158 YINLLSCH------------------TWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRC----LL 214 (419)
Q Consensus 158 ~v~i~d~~------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~----~~ 214 (419)
.|++||++ .++.+..+ .|...|.+++|+|+++++++ ++.|+.|++||+ +++. +.
T Consensus 169 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~--~~~d~~i~iwd~~~~~~~~~~~~ 245 (377)
T 3dwl_C 169 KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAY--AGHDSSVTIAYPSAPEQPPRALI 245 (377)
T ss_dssp CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEE--EETTTEEC-CEECSTTSCEEECC
T ss_pred EEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEE--EeCCCcEEEEECCCCCCcceeeE
Confidence 99999985 35566666 88899999999999999998 567999999999 6665 56
Q ss_pred EEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCC
Q 014755 215 KYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLT 253 (419)
Q Consensus 215 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~ 253 (419)
.+..+.. .|.+++|+|++++|++++.++.+ +|+...
T Consensus 246 ~~~~~~~--~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~ 281 (377)
T 3dwl_C 246 TVKLSQL--PLRSLLWANESAIVAAGYNYSPI-LLQGNE 281 (377)
T ss_dssp CEECSSS--CEEEEEEEETTEEEEEESSSSEE-EECCCC
T ss_pred eecCCCC--ceEEEEEcCCCCEEEEEcCCcEE-EEEeCC
Confidence 6666655 89999999999999998866555 776653
No 91
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-38 Score=281.81 Aligned_cols=217 Identities=8% Similarity=0.004 Sum_probs=170.3
Q ss_pred ccCeEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeec
Q 014755 10 TGPSCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDE 88 (419)
Q Consensus 10 ~~~~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~ 88 (419)
...++|||||+++|+++ |++|+ |...++.+ -+|...|.+++|+|+| .+ +.+.+|+.+... ...+ .
T Consensus 18 v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l--~gh~~~v~~V~FsPdg-------~~-~~~~~~~~~~~~-~~~~-~ 83 (588)
T 2j04_A 18 KNNLTWARDGTLYLTTFPDISIG--QPKYAKDI--NCNSKNLFHVKEFPLE-------FE-NKLDFELAQQNG-LLNS-Q 83 (588)
T ss_dssp SCCEEECTTSCEEEECSSSEEEE--EECCCSCC--SSBGGGTEEEEEECCC-------CC-CTTTTSCCCSSC-SSTT-S
T ss_pred EEEEEECCCCCEEEEEcCCceee--ccccccee--cCCCccEEEEEECCCC-------Cc-ceEEEEeCCCce-Eeec-C
Confidence 44599999999999998 77788 77766655 4799999999999999 23 455565543222 2222 4
Q ss_pred CCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCC-----CeeeEEEccCCCEEEEEeecCCCCeEEEE
Q 014755 89 GLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKH-----ASKGVAFTQDGKFAAICTRRDCKDYINLL 162 (419)
Q Consensus 89 ~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~g~v~i~ 162 (419)
|...|.+++|||+|+.|++++.++ .|++||.++ ... +. +.. .+.+++|||||++|++++.| |+|++|
T Consensus 84 ~~~~V~~vawSPdG~~LAs~s~dg-~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~D---GtVkIW 156 (588)
T 2j04_A 84 PVCYPRVCKPSPIDDWMAVLSNNG-NVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNED---GELQFF 156 (588)
T ss_dssp CSCCEEEEEECSSSSCEEEEETTS-CEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETT---SEEEEE
T ss_pred CCCcEEEEEECCCCCEEEEEeCCC-cEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCC---CEEEEE
Confidence 577899999999999999999998 999999654 333 44 444 48999999999999999997 899999
Q ss_pred eccCCe-------EEEEE----eccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCce----EEEEe-ecCCCCcee
Q 014755 163 SCHTWE-------IMGVF----AVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRC----LLKYQ-AYESGLGVK 226 (419)
Q Consensus 163 d~~~~~-------~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~----~~~~~-~~~~~~~v~ 226 (419)
|+.++. .+..+ .+|...|.+++|+|+| +++ ++.|+.+++||+.+.. .+.+. .|. ..|.
T Consensus 157 d~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laa--ss~D~tVrlWd~~~~~~~~~~~tL~~~h~--~~V~ 230 (588)
T 2j04_A 157 SIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVA--ALSNNSVFSMTVSASSHQPVSRMIQNASR--RKIT 230 (588)
T ss_dssp ECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEE--EETTCCEEEECCCSSSSCCCEEEEECCCS--SCCC
T ss_pred ECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEE--EeCCCeEEEEECCCCccccceeeeccccc--CcEE
Confidence 999875 35665 5566899999999999 555 4569999999994433 23453 443 3799
Q ss_pred EEEEccCCCeEEEEEecCcEEEEEcCCcee
Q 014755 227 SISWSPCGQFLAVGSYDQTLRVLNHLTWKT 256 (419)
Q Consensus 227 ~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~ 256 (419)
+++|+ |+.||+++ +++|++||+.+++.
T Consensus 231 svaFs--g~~LASa~-~~tIkLWd~~~~~~ 257 (588)
T 2j04_A 231 DLKIV--DYKVVLTC-PGYVHKIDLKNYSI 257 (588)
T ss_dssp CEEEE--TTEEEEEC-SSEEEEEETTTTEE
T ss_pred EEEEE--CCEEEEEe-CCeEEEEECCCCeE
Confidence 99999 68898887 69999999988776
No 92
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.3e-35 Score=263.98 Aligned_cols=316 Identities=13% Similarity=0.105 Sum_probs=244.9
Q ss_pred EEEEEe-CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEEC
Q 014755 21 YIAVAV-DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWS 99 (419)
Q Consensus 21 ~la~~~-~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~ 99 (419)
++++++ ++.|++||+.+++.+..+.+...+.+++|+|+|+++++++..++.|++||+.+++....+..+. .+.+++|+
T Consensus 4 l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~s 82 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVS 82 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEEC
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEEC
Confidence 455665 8899999999999998888777899999999999885554334899999999998887776555 89999999
Q ss_pred CCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccc
Q 014755 100 PDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLD 179 (419)
Q Consensus 100 ~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~ 179 (419)
|++++|++++.+++.|++||+.+++..........+.+++|+|+++.+++++.. ++.|++||+++++.+..+..+ ..
T Consensus 83 pdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--~~~v~~~d~~~~~~~~~~~~~-~~ 159 (391)
T 1l0q_A 83 PDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNG--DKTVSVINTVTKAVINTVSVG-RS 159 (391)
T ss_dssp TTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETT--TTEEEEEETTTTEEEEEEECC-SS
T ss_pred CCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCC--CCEEEEEECCCCcEEEEEecC-CC
Confidence 999999877755459999999999988855556678999999999988544432 379999999999988888765 45
Q ss_pred eeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEE---ecCcEEEEEcCCce
Q 014755 180 LADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGS---YDQTLRVLNHLTWK 255 (419)
Q Consensus 180 v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~---~d~~i~v~d~~~~~ 255 (419)
+..++|+|+++.+++. ...++.|++||+ +++....+... . .+.+++|+|++++|++++ .++.|++||+.+++
T Consensus 160 ~~~~~~~~dg~~l~~~-~~~~~~v~~~d~~~~~~~~~~~~~-~--~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~ 235 (391)
T 1l0q_A 160 PKGIAVTPDGTKVYVA-NFDSMSISVIDTVTNSVIDTVKVE-A--APSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK 235 (391)
T ss_dssp EEEEEECTTSSEEEEE-ETTTTEEEEEETTTTEEEEEEECS-S--EEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE
T ss_pred cceEEECCCCCEEEEE-eCCCCEEEEEECCCCeEEEEEecC-C--CccceEECCCCCEEEEEecCcCCCcEEEEECCCCe
Confidence 6999999999988653 355799999999 66666665533 2 789999999999999888 58999999999888
Q ss_pred eeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcc
Q 014755 256 TFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQG 335 (419)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (419)
.+..+.. | ..
T Consensus 236 ~~~~~~~---------------------------------------------------------------------~-~~ 245 (391)
T 1l0q_A 236 ITARIPV---------------------------------------------------------------------G-PD 245 (391)
T ss_dssp EEEEEEC---------------------------------------------------------------------C-SS
T ss_pred EEEEEec---------------------------------------------------------------------C-CC
Confidence 7666531 1 12
Q ss_pred eEEEEEccCCeEE-EEecCCCCceEEEeeccCCCceeecc-cCCCee---EEEeCC------------CC----------
Q 014755 336 IGLMSWSSDSQYI-CTRNDSMPTTLWIWDICRQEPAAILV-QKDPIR---AATWDP------------TC---------- 388 (419)
Q Consensus 336 v~~~~~s~~g~~l-~~~~~d~~~~i~iwd~~~~~~~~~~~-~~~~v~---~~~~s~------------~~---------- 388 (419)
+.+++|+|+|++| ++++.| +.|++||+.++++...+. |..+.. .+.+.| +.
T Consensus 246 ~~~~~~s~dg~~l~~s~~~d--~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~ 323 (391)
T 1l0q_A 246 PAGIAVTPDGKKVYVALSFX--NTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEP 323 (391)
T ss_dssp EEEEEECTTSSEEEEEETTT--TEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCC
T ss_pred ccEEEEccCCCEEEEEcCCC--CEEEEEECCCCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccce
Confidence 6789999999877 566777 999999999988776553 332211 122222 11
Q ss_pred CeEEEEeCCCcEEEeecCCCeEEecCCC
Q 014755 389 TRLVLCTGSSHLYMWTPSGAYCVSNPLP 416 (419)
Q Consensus 389 ~~l~s~~~dg~i~vw~~~~~~~~~~~~~ 416 (419)
..+...+.|..+++|++..+.......+
T Consensus 324 ~~~~~~~~~~~~~~W~~~~g~~~~~~~~ 351 (391)
T 1l0q_A 324 VQFTDLSKDATEWKWDFGDGSSSKKQNP 351 (391)
T ss_dssp EEEEECCBSCSEEEEECSSSCEECSSSC
T ss_pred EEEEeCCCCceEEEEECCCCcccCcCCC
Confidence 2355666788999999987765544433
No 93
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3.4e-37 Score=263.15 Aligned_cols=248 Identities=10% Similarity=0.129 Sum_probs=203.3
Q ss_pred eecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC--cceeeeecCCccEeEEEECCC--CCEEEEEecCCCeEEEEE
Q 014755 44 FSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP--EWTCKIDEGLAGIAYARWSPD--SRHILTTSDFQLRLTVWS 119 (419)
Q Consensus 44 ~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~~i~iwd 119 (419)
.+|.+.|.+++|+|+|++||+++.| ++|+|||+.+. +.+..+.+|..+|.+++|+++ +++|++++.|+ +|++||
T Consensus 6 ~~h~~~V~~~~~s~~g~~las~s~D-~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~-~v~iWd 83 (297)
T 2pm7_B 6 NAHNEMIHDAVMDYYGKRMATCSSD-KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG-KVMIWK 83 (297)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETT-SCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTT-EEEEEE
T ss_pred cCCcCceEEEEECCCCCEEEEEeCC-CEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCC-EEEEEE
Confidence 4599999999999999999999977 89999999743 667788999999999999864 89999999988 999999
Q ss_pred cCCCe--EE-EeccCCCCeeeEEEccC--CCEEEEEeecCCCCeEEEEeccCCe--EEEEEeccccceeeeeECCC----
Q 014755 120 LLNTA--CV-HVQSPKHASKGVAFTQD--GKFAAICTRRDCKDYINLLSCHTWE--IMGVFAVDTLDLADIEWSPD---- 188 (419)
Q Consensus 120 ~~~~~--~~-~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~g~v~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~---- 188 (419)
+++++ .. .+..|...+.+++|+|+ +.+|++++.| +.|++||++++. ....+..|...+.+++|+|+
T Consensus 84 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d---~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 160 (297)
T 2pm7_B 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD---GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 160 (297)
T ss_dssp BSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT---SEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC---
T ss_pred cCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC---CcEEEEEecCCCceeeeeeecccCccceEeecCCcccc
Confidence 99874 22 26678889999999998 8899999987 899999998753 24567788999999999997
Q ss_pred ---------CCeEEEEcCCCCceEEEEcC-CCc----eEEEEeecCCCCceeEEEEccCC---CeEEEEEecCcEEEEEc
Q 014755 189 ---------DSAIVIWDSPLEYKVLIYSP-DGR----CLLKYQAYESGLGVKSISWSPCG---QFLAVGSYDQTLRVLNH 251 (419)
Q Consensus 189 ---------~~~l~~~~~~~~~~i~~~d~-~~~----~~~~~~~~~~~~~v~~~~~s~~~---~~l~~~~~d~~i~v~d~ 251 (419)
++.|++ ++.|+.|++||+ +++ ....+..|.. .|.+++|+|++ ++|++++.|++|++||+
T Consensus 161 ~~~~~~~~~~~~l~s--gs~D~~v~lwd~~~~~~~~~~~~~l~~H~~--~V~~v~~sp~~~~~~~las~s~D~~v~iWd~ 236 (297)
T 2pm7_B 161 DGEHNGTKESRKFVT--GGADNLVKIWKYNSDAQTYVLESTLEGHSD--WVRDVAWSPTVLLRSYMASVSQDRTCIIWTQ 236 (297)
T ss_dssp ---------CCEEEE--EETTSCEEEEEEETTTTEEEEEEEECCCSS--CEEEEEECCCCSSSEEEEEEETTSCEEEEEE
T ss_pred cccCCCCCCcceEEE--EcCCCcEEEEEEcCCCceEEEEEEecCCCC--ceEEEEECCCCCCceEEEEEECCCcEEEEEe
Confidence 467777 677999999999 554 4456666655 89999999984 89999999999999998
Q ss_pred CCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCC
Q 014755 252 LTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPN 331 (419)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (419)
++........ .+ ....
T Consensus 237 ~~~~~~~~~~------------~~----------------------------------------------------~~~~ 252 (297)
T 2pm7_B 237 DNEQGPWKKT------------LL----------------------------------------------------KEEK 252 (297)
T ss_dssp SSTTSCCEEE------------ES----------------------------------------------------SSSC
T ss_pred CCCCCcccee------------ee----------------------------------------------------eccc
Confidence 7632100000 00 0013
Q ss_pred CCcceEEEEEccCCeEEEEecCCCCceEEEeeccC
Q 014755 332 PKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICR 366 (419)
Q Consensus 332 ~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~ 366 (419)
|...|.+++|+|+|++||+++.| +.|+||+...
T Consensus 253 ~~~~v~~~~~s~~g~~las~~~D--~~v~lw~~~~ 285 (297)
T 2pm7_B 253 FPDVLWRASWSLSGNVLALSGGD--NKVTLWKENL 285 (297)
T ss_dssp CSSCEEEEEECSSSCCEEEEETT--SCEEEEEECT
T ss_pred CCCcEEEEEECCCCCEEEEEcCC--CcEEEEEECC
Confidence 66779999999999999999999 9999999763
No 94
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.2e-37 Score=279.05 Aligned_cols=273 Identities=13% Similarity=0.237 Sum_probs=231.2
Q ss_pred cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeE
Q 014755 46 CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTAC 125 (419)
Q Consensus 46 ~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~ 125 (419)
|...|.+++| ++++|++++.| |.|++||+.+++....+.+|...|.+++| +++.|++++.|+ .|++||+++++.
T Consensus 132 ~~~~v~~~~~--d~~~l~~g~~d-g~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg-~i~vwd~~~~~~ 205 (435)
T 1p22_A 132 TSKGVYCLQY--DDQKIVSGLRD-NTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDS-TVRVWDVNTGEM 205 (435)
T ss_dssp SCCCEEEEEC--CSSEEEEEESS-SCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTS-CEEEEESSSCCE
T ss_pred CCCcEEEEEE--CCCEEEEEeCC-CeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCC-eEEEEECCCCcE
Confidence 5567888776 78999999977 89999999999999999999999999998 788999999988 999999999988
Q ss_pred EE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEE---EEEeccccceeeeeECCCCCeEEEEcCCCCc
Q 014755 126 VH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIM---GVFAVDTLDLADIEWSPDDSAIVIWDSPLEY 201 (419)
Q Consensus 126 ~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~ 201 (419)
.. +..|...+.+++|++ ..+++++.| |.|++||+++++.. ..+..|...|.+++| +++.+++ ++.|+
T Consensus 206 ~~~~~~h~~~v~~l~~~~--~~l~s~s~d---g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s--~~~dg 276 (435)
T 1p22_A 206 LNTLIHHCEAVLHLRFNN--GMMVTCSKD---RSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVS--ASGDR 276 (435)
T ss_dssp EEEECCCCSCEEEEECCT--TEEEEEETT---SCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEE--EETTS
T ss_pred EEEEcCCCCcEEEEEEcC--CEEEEeeCC---CcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEE--EeCCC
Confidence 77 788899999999974 589999887 89999999887654 667788899999999 7788888 66799
Q ss_pred eEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCC
Q 014755 202 KVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDE 280 (419)
Q Consensus 202 ~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (419)
.|++||+ +++.+..+..+.. .+.++++ +++++++++.|+.|++||+++++++..+.
T Consensus 277 ~i~vwd~~~~~~~~~~~~~~~--~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~------------------- 333 (435)
T 1p22_A 277 TIKVWNTSTCEFVRTLNGHKR--GIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLE------------------- 333 (435)
T ss_dssp EEEEEETTTCCEEEEEECCSS--CEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEEC-------------------
T ss_pred eEEEEECCcCcEEEEEcCCCC--cEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEe-------------------
Confidence 9999999 8888888887766 7999988 46799999999999999999988777654
Q ss_pred cccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEE
Q 014755 281 PLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLW 360 (419)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~ 360 (419)
+|...|.+++| ++.+|++|+.| |.|+
T Consensus 334 --------------------------------------------------~h~~~v~~~~~--~~~~l~sg~~d--g~i~ 359 (435)
T 1p22_A 334 --------------------------------------------------GHEELVRCIRF--DNKRIVSGAYD--GKIK 359 (435)
T ss_dssp --------------------------------------------------CCSSCEEEEEC--CSSEEEEEETT--SCEE
T ss_pred --------------------------------------------------CCcCcEEEEEe--cCCEEEEEeCC--CcEE
Confidence 36677899988 78899999999 9999
Q ss_pred EeeccCCC---------ceeec-ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEEe
Q 014755 361 IWDICRQE---------PAAIL-VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCVS 412 (419)
Q Consensus 361 iwd~~~~~---------~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~ 412 (419)
+||+.+++ +...+ +|.+.|++++| ++++|++++.||+|++||+.+.....
T Consensus 360 vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~ 419 (435)
T 1p22_A 360 VWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQ 419 (435)
T ss_dssp EEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC--------
T ss_pred EEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcc
Confidence 99998765 44444 69999999999 78899999999999999998665443
No 95
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.2e-37 Score=280.57 Aligned_cols=237 Identities=16% Similarity=0.226 Sum_probs=194.4
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCCCc-----------EEE-EeecC------------cceeEEEEecCC--CeEEEE
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHSFK-----------VVQ-LFSCL------------DKISYIEWALDS--EYILCG 65 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~~~-----------~~~-~~~~~------------~~v~~~~~s~~~--~~l~~~ 65 (419)
++|+|+|++||+|+ ++.|+|||+.+++ +.. ..+|. +.|.+++|+|++ ..|+++
T Consensus 34 v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~ 113 (447)
T 3dw8_B 34 VEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLS 113 (447)
T ss_dssp EEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEe
Confidence 89999999999998 8999999999876 233 34577 889999999998 789999
Q ss_pred eccCCeEEEEEccCCcce---------------------------------------ee-eecCCccEeEEEECCCCCEE
Q 014755 66 LYKRLMIQAWSLTQPEWT---------------------------------------CK-IDEGLAGIAYARWSPDSRHI 105 (419)
Q Consensus 66 ~~~~g~i~iw~~~~~~~~---------------------------------------~~-~~~~~~~v~~~~~~~~~~~l 105 (419)
+.| ++|++||+.+++.. .. ..+|...|.+++|+|++++|
T Consensus 114 s~d-~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 192 (447)
T 3dw8_B 114 TND-KTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETY 192 (447)
T ss_dssp ECS-SCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEE
T ss_pred CCC-CeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEE
Confidence 876 89999999764331 11 35788999999999999999
Q ss_pred EEEecCCCeEEEEEcCC-CeEEE--------eccCCCCeeeEEEccCC-CEEEEEeecCCCCeEEEEeccCCeE----EE
Q 014755 106 LTTSDFQLRLTVWSLLN-TACVH--------VQSPKHASKGVAFTQDG-KFAAICTRRDCKDYINLLSCHTWEI----MG 171 (419)
Q Consensus 106 ~~~~~~~~~i~iwd~~~-~~~~~--------~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~g~v~i~d~~~~~~----~~ 171 (419)
+++ .|+ .|++||++. ++... +..|...+.+++|+|++ ++|++++.| |.|++||+++++. ..
T Consensus 193 ~s~-~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~ 267 (447)
T 3dw8_B 193 LSA-DDL-RINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSK---GTIRLCDMRASALCDRHSK 267 (447)
T ss_dssp EEE-CSS-EEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETT---SCEEEEETTTCSSSCTTCE
T ss_pred EEe-CCC-eEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCC---CeEEEEECcCCccccceee
Confidence 998 666 999999994 44443 34788889999999998 999999987 8999999999876 67
Q ss_pred EEecccc------------ceeeeeECCCCCeEEEEcCCCCceEEEEcC-C-CceEEEEeecCCCC-------------c
Q 014755 172 VFAVDTL------------DLADIEWSPDDSAIVIWDSPLEYKVLIYSP-D-GRCLLKYQAYESGL-------------G 224 (419)
Q Consensus 172 ~~~~~~~------------~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~-~~~~~~~~~~~~~~-------------~ 224 (419)
.+..|.. .|.+++|+|+++++++ ++. +.|++||+ . ++.+..+..+.... .
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~--~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~ 344 (447)
T 3dw8_B 268 LFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMT--RDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFD 344 (447)
T ss_dssp EECCC-----CCHHHHHTTCEEEEEECTTSSEEEE--EES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGC
T ss_pred EeccCCCccccccccccCceEEEEEECCCCCEEEE--eeC-CeEEEEeCCCCccccceeecccccccccccccccccccc
Confidence 7777765 8999999999999998 444 99999999 4 78888887764310 0
Q ss_pred eeEEEEccCCCeEEEEEecCcEEEEEcCCceeee
Q 014755 225 VKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFA 258 (419)
Q Consensus 225 v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~ 258 (419)
+..++|+|++++|++++.||.|++||+.+++.+.
T Consensus 345 ~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 345 KFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT 378 (447)
T ss_dssp CCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE
T ss_pred ceEEEECCCCCEEEEeccCCEEEEEEcCCCccee
Confidence 3349999999999999999999999999988764
No 96
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.9e-36 Score=273.23 Aligned_cols=315 Identities=10% Similarity=0.037 Sum_probs=248.4
Q ss_pred EcCCCCEEEEEe---------------CC--eEEEEecCCC--cEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEE
Q 014755 15 FSPNARYIAVAV---------------DY--RLVVRDAHSF--KVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAW 75 (419)
Q Consensus 15 ~s~d~~~la~~~---------------~~--~i~i~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw 75 (419)
|+|+++.++..+ ++ .|..+|..++ +.+..+.....+.+++|+|++.++++++ +++.|++|
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~-~~~~i~~~ 149 (433)
T 3bws_A 71 YKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAIPLL-EDEGMDVL 149 (433)
T ss_dssp CCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECSSCBCCCEESSSSEEEEEBT-TSSSEEEE
T ss_pred ccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCCCCceEEEEeCCCeEEEEeC-CCCeEEEE
Confidence 788888776543 11 3444555445 4555566666788999999665555555 44799999
Q ss_pred EccCCccee-----eeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEE
Q 014755 76 SLTQPEWTC-----KIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAI 149 (419)
Q Consensus 76 ~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~ 149 (419)
|+.+++... .+..|...|.+++|+|+++.+++++.++ .|++||+++++... +..+...+.+++|+|+++.+++
T Consensus 150 d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~-~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 228 (433)
T 3bws_A 150 DINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQAN-AVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYC 228 (433)
T ss_dssp ETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGT-EEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEE
T ss_pred ECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCC-EEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEE
Confidence 999998776 3446778999999999999999998887 99999999988776 6677888999999999998876
Q ss_pred EeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCC------CCceEEEEcC-CCceEEEEeecCCC
Q 014755 150 CTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSP------LEYKVLIYSP-DGRCLLKYQAYESG 222 (419)
Q Consensus 150 ~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~------~~~~i~~~d~-~~~~~~~~~~~~~~ 222 (419)
++.. ++.|++||+++++.+..+..+ ..+.+++|+|+++.+++.... .++.|++||+ +++.+..+.. ..
T Consensus 229 ~~~~--~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~-~~- 303 (433)
T 3bws_A 229 SNWI--SEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGP-PG- 303 (433)
T ss_dssp EETT--TTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEE-EE-
T ss_pred EecC--CCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccC-CC-
Confidence 6632 379999999999888777664 458999999999998874321 4789999999 6666655532 22
Q ss_pred CceeEEEEccCCCeE-EEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCcccccccc
Q 014755 223 LGVKSISWSPCGQFL-AVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSD 301 (419)
Q Consensus 223 ~~v~~~~~s~~~~~l-~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (419)
.+.+++|+|+++.+ ++++.++.|++||+.+++.+..+.
T Consensus 304 -~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~---------------------------------------- 342 (433)
T 3bws_A 304 -NKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP---------------------------------------- 342 (433)
T ss_dssp -CEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE----------------------------------------
T ss_pred -CcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec----------------------------------------
Confidence 68899999999755 566889999999999888766653
Q ss_pred ccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCC-------------CceEEEeeccCCC
Q 014755 302 ATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSM-------------PTTLWIWDICRQE 368 (419)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~-------------~~~i~iwd~~~~~ 368 (419)
+...+.+++|+|+|+++++++.+. +|.|++||+.+++
T Consensus 343 ------------------------------~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~ 392 (433)
T 3bws_A 343 ------------------------------VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT 392 (433)
T ss_dssp ------------------------------CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTE
T ss_pred ------------------------------CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCc
Confidence 233478899999999888887621 2699999999999
Q ss_pred ceeecccCCCeeEEEeCCCCCeEEEEeC-CCcEEEeecCC
Q 014755 369 PAAILVQKDPIRAATWDPTCTRLVLCTG-SSHLYMWTPSG 407 (419)
Q Consensus 369 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~-dg~i~vw~~~~ 407 (419)
+...+.+...+.+++|+|+|++|++++. |+.|++|++++
T Consensus 393 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 393 VKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEEEEECSSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred EEEEecCCCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 8888877778999999999999988775 99999999864
No 97
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4.1e-37 Score=269.33 Aligned_cols=286 Identities=15% Similarity=0.170 Sum_probs=211.6
Q ss_pred eecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC----cceeeeecCCccEeEEEECC--CCCEEEEEecCCCeEEE
Q 014755 44 FSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP----EWTCKIDEGLAGIAYARWSP--DSRHILTTSDFQLRLTV 117 (419)
Q Consensus 44 ~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~~i~i 117 (419)
.+|.+.|++++|+|++++|++++.| |.|++||+.++ +....+..|...|.+++|+| ++++|++++.|+ .|++
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~~~~d-g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg-~v~v 85 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVATCSSD-QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDK-TVKL 85 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETT-SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTS-CEEE
T ss_pred cccccceeEEEEcCCCCEEEEeeCC-CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCC-eEEE
Confidence 4699999999999999999999977 89999999876 35566778999999999999 699999999988 9999
Q ss_pred EEcCCC---------eEEE-eccCCCCeeeEEEccC--CCEEEEEeecCCCCeEEEEeccCCeEEEEEe-----------
Q 014755 118 WSLLNT---------ACVH-VQSPKHASKGVAFTQD--GKFAAICTRRDCKDYINLLSCHTWEIMGVFA----------- 174 (419)
Q Consensus 118 wd~~~~---------~~~~-~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~----------- 174 (419)
||++++ +... +..+...+.+++|+|+ +.++++++.| |.|++||+++++.+..+.
T Consensus 86 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 162 (351)
T 3f3f_A 86 WEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND---GILRLYDALEPSDLRSWTLTSEMKVLSIP 162 (351)
T ss_dssp EEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT---CEEEEEECSSTTCTTCCEEEEEEESCSCC
T ss_pred EecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCC---CcEEEecCCChHHhccccccccccccccc
Confidence 999986 3344 7788999999999999 9999999987 899999998876544332
Q ss_pred --ccccceeeeeECCC---CCeEEEEcCCCCceEEEEcC-CCce--EEEEeecCCCCceeEEEEccCC----CeEEEEEe
Q 014755 175 --VDTLDLADIEWSPD---DSAIVIWDSPLEYKVLIYSP-DGRC--LLKYQAYESGLGVKSISWSPCG----QFLAVGSY 242 (419)
Q Consensus 175 --~~~~~v~~~~~~~~---~~~l~~~~~~~~~~i~~~d~-~~~~--~~~~~~~~~~~~v~~~~~s~~~----~~l~~~~~ 242 (419)
.+...+.+++|+|+ +..+++ +..++.+.+|+. .++. +..+..| ...|.+++|+|++ ++|++++.
T Consensus 163 ~~~~~~~~~~~~~~p~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~h--~~~i~~~~~~p~~~~~~~~l~s~~~ 238 (351)
T 3f3f_A 163 PANHLQSDFCLSWCPSRFSPEKLAV--SALEQAIIYQRGKDGKLHVAAKLPGH--KSLIRSISWAPSIGRWYQLIATGCK 238 (351)
T ss_dssp CSSCSCCCEEEEECCCSSSCCEEEE--EETTEEEEEEECTTSCEEEEEECCCC--CSCEEEEEECCCSSCSSEEEEEEET
T ss_pred cCCcccceeEEEeccCCCCCcEEEE--ecCCCcEEEEccCCCceeeeeecCCC--CcceeEEEECCCCCCcceEEEEEcC
Confidence 46678999999997 888888 566888877777 5544 3344444 4489999999998 89999999
Q ss_pred cCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCC
Q 014755 243 DQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPF 322 (419)
Q Consensus 243 d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (419)
||.|++||+.++........
T Consensus 239 dg~i~iwd~~~~~~~~~~~~------------------------------------------------------------ 258 (351)
T 3f3f_A 239 DGRIRIFKITEKLSPLASEE------------------------------------------------------------ 258 (351)
T ss_dssp TSCEEEEEEEECC-------------------------------------------------------------------
T ss_pred CCeEEEEeCCCCcCccccCC------------------------------------------------------------
Confidence 99999999986543322210
Q ss_pred CCCCCCCCCCCcceEEEEEccCCeEEEEe----cCCCCceEEEeeccCCCceeec-ccCCCeeEEEeCCCCCeEEEEeCC
Q 014755 323 QKPPTDKPNPKQGIGLMSWSSDSQYICTR----NDSMPTTLWIWDICRQEPAAIL-VQKDPIRAATWDPTCTRLVLCTGS 397 (419)
Q Consensus 323 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~~----~~d~~~~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~d 397 (419)
+...+.....++....++.+ ... ..+.+|+....+++..+ +|...|++++|+|++++|++++.|
T Consensus 259 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d 327 (351)
T 3f3f_A 259 ---------SLTNSNMFDNSADVDMDAQGRSDSNTE--EKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDD 327 (351)
T ss_dssp -------------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETT
T ss_pred ---------cccceeccCCCcccccccccccccccc--eeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCC
Confidence 00011222223333333333 223 55677776666666555 599999999999999999999999
Q ss_pred CcEEEeecCCCe
Q 014755 398 SHLYMWTPSGAY 409 (419)
Q Consensus 398 g~i~vw~~~~~~ 409 (419)
|.|++|++.+++
T Consensus 328 g~v~iw~~~~~~ 339 (351)
T 3f3f_A 328 GKVRLWKATYSN 339 (351)
T ss_dssp SCEEEEEECTTS
T ss_pred CcEEEEecCcCc
Confidence 999999999754
No 98
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.6e-37 Score=267.43 Aligned_cols=245 Identities=14% Similarity=0.209 Sum_probs=197.1
Q ss_pred eeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeE--EE-eccCCCCeeeEEEcc--CCCEEEEEeecCCCCeE
Q 014755 85 KIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTAC--VH-VQSPKHASKGVAFTQ--DGKFAAICTRRDCKDYI 159 (419)
Q Consensus 85 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~--~~-~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~g~v 159 (419)
.+.+|...|.+++|+|+|++|++++.|+ .|++||++++.. .. +.+|...|.+++|+| ++++|++++.| ++|
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~-~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D---~~v 83 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDR-SVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD---RKV 83 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTT-EEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT---SCE
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCC-eEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC---CEE
Confidence 3568999999999999999999999998 999999998753 33 788999999999986 48999999987 899
Q ss_pred EEEeccCC--eEEEEEeccccceeeeeECCC--CCeEEEEcCCCCceEEEEcCC-CceEE-EEeecCCCCceeEEEEccC
Q 014755 160 NLLSCHTW--EIMGVFAVDTLDLADIEWSPD--DSAIVIWDSPLEYKVLIYSPD-GRCLL-KYQAYESGLGVKSISWSPC 233 (419)
Q Consensus 160 ~i~d~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~~~i~~~d~~-~~~~~-~~~~~~~~~~v~~~~~s~~ 233 (419)
++||++++ +....+..|...|.+++|+|+ +.++++ ++.|+.|++||+. +.... ......+...+.+++|+|+
T Consensus 84 ~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~las--gs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 161 (316)
T 3bg1_A 84 IIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILAC--GSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPA 161 (316)
T ss_dssp EEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEE--ECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCC
T ss_pred EEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEE--EcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccc
Confidence 99999986 456677889999999999998 778887 6779999999993 32221 1112223347999999997
Q ss_pred -----------------CCeEEEEEecCcEEEEEcCCce---eeeeecccccccCCCccceeccCCCcccccceeeeccC
Q 014755 234 -----------------GQFLAVGSYDQTLRVLNHLTWK---TFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLND 293 (419)
Q Consensus 234 -----------------~~~l~~~~~d~~i~v~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (419)
+++|++++.|++|++||++... ++..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~---------------------------------- 207 (316)
T 3bg1_A 162 VVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQK---------------------------------- 207 (316)
T ss_dssp CCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEEC----------------------------------
T ss_pred cCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeee----------------------------------
Confidence 4789999999999999986542 2222
Q ss_pred ccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCC----eEEEEecCCCCceEEEeeccCC--
Q 014755 294 DFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDS----QYICTRNDSMPTTLWIWDICRQ-- 367 (419)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g----~~l~~~~~d~~~~i~iwd~~~~-- 367 (419)
+.+|...|.+++|+|++ ++||+++.| ++|+||++.+.
T Consensus 208 -----------------------------------l~~h~~~V~~v~~sp~~~~~~~~las~s~D--~~v~iw~~~~~~~ 250 (316)
T 3bg1_A 208 -----------------------------------LEAHSDWVRDVAWAPSIGLPTSTIASCSQD--GRVFIWTCDDASS 250 (316)
T ss_dssp -----------------------------------CBCCSSCEEEEECCCCSSCSCCEEEEEETT--CEEEEEECSSTTC
T ss_pred -----------------------------------cccCCCceEEEEecCCCCCCCceEEEEcCC--CeEEEEEccCccc
Confidence 22588889999999987 889999999 99999999863
Q ss_pred -C--ceeecccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 368 -E--PAAILVQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 368 -~--~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
+ ...+.+|...|++++|+|++++||+++.|++|++|+..
T Consensus 251 ~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 251 NTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred cchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 1 12233589999999999999999999999999999986
No 99
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3.5e-36 Score=272.24 Aligned_cols=277 Identities=16% Similarity=0.252 Sum_probs=238.7
Q ss_pred EeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC
Q 014755 43 LFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN 122 (419)
Q Consensus 43 ~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~ 122 (419)
..+|.+.+.. +++++|++|++++.| |+|++||+.+++....+.+|...|.+++|+ ++.+++++.|+ .|++||+.+
T Consensus 114 l~~h~~~v~~-~~~~~g~~l~sg~~d-g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg-~i~vwd~~~ 188 (445)
T 2ovr_B 114 LKGHDDHVIT-CLQFCGNRIVSGSDD-NTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDR-TLKVWNAET 188 (445)
T ss_dssp EECSTTSCEE-EEEEETTEEEEEETT-SCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTS-CEEEEETTT
T ss_pred ecccCCCcEE-EEEEcCCEEEEEECC-CcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCC-eEEEEECCc
Confidence 4458776533 355568999999976 899999999999999999999999999997 56899999987 999999999
Q ss_pred CeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCc
Q 014755 123 TACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEY 201 (419)
Q Consensus 123 ~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~ 201 (419)
++... +..|...+.+++++ ++.+++++.| |.|++||+++++.+..+..|...+.++.| +++.+++ ++.++
T Consensus 189 ~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~d---g~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~--~~~dg 259 (445)
T 2ovr_B 189 GECIHTLYGHTSTVRCMHLH--EKRVVSGSRD---ATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVS--GAYDF 259 (445)
T ss_dssp TEEEEEECCCSSCEEEEEEE--TTEEEEEETT---SEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEE--EETTS
T ss_pred CcEEEEECCCCCcEEEEEec--CCEEEEEeCC---CEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEE--EcCCC
Confidence 98887 78899999999985 5689999887 89999999999999999999999999999 6788887 56799
Q ss_pred eEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCC
Q 014755 202 KVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDE 280 (419)
Q Consensus 202 ~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (419)
.|++||+ +++.+..+..+.. .+.+++| +++++++++.|+.|++||+.+++++..+.
T Consensus 260 ~i~iwd~~~~~~~~~~~~~~~--~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~------------------- 316 (445)
T 2ovr_B 260 MVKVWDPETETCLHTLQGHTN--RVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT------------------- 316 (445)
T ss_dssp CEEEEEGGGTEEEEEECCCSS--CEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEEC-------------------
T ss_pred EEEEEECCCCcEeEEecCCCC--ceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEc-------------------
Confidence 9999999 8888888877665 8999999 78899999999999999999988776653
Q ss_pred cccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEE
Q 014755 281 PLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLW 360 (419)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~ 360 (419)
+|...+.++.+ +++++++++.| |.|+
T Consensus 317 --------------------------------------------------~~~~~v~~~~~--~~~~l~~~~~d--g~i~ 342 (445)
T 2ovr_B 317 --------------------------------------------------GHQSLTSGMEL--KDNILVSGNAD--STVK 342 (445)
T ss_dssp --------------------------------------------------CCCSCEEEEEE--ETTEEEEEETT--SCEE
T ss_pred --------------------------------------------------CCcccEEEEEE--eCCEEEEEeCC--CeEE
Confidence 25555676665 56799999998 9999
Q ss_pred EeeccCCCceeecc----cCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEEe
Q 014755 361 IWDICRQEPAAILV----QKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCVS 412 (419)
Q Consensus 361 iwd~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~ 412 (419)
+||+.+++....+. |...|++++|+ +++|++++.||.|++||+.+++.+.
T Consensus 343 vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~ 396 (445)
T 2ovr_B 343 IWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIR 396 (445)
T ss_dssp EEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEE
T ss_pred EEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceee
Confidence 99999998876663 88899999995 6899999999999999999887654
No 100
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=7.2e-37 Score=275.74 Aligned_cols=291 Identities=15% Similarity=0.273 Sum_probs=226.6
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCC
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGL 90 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~ 90 (419)
.++++++++|++|+ ++.|++||+.+++....+. |.+.|.+++| ++++|++++.| |+|++||+.+++.+..+..|.
T Consensus 137 ~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~d-g~i~vwd~~~~~~~~~~~~h~ 213 (435)
T 1p22_A 137 YCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSD-STVRVWDVNTGEMLNTLIHHC 213 (435)
T ss_dssp EEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETT-SCEEEEESSSCCEEEEECCCC
T ss_pred EEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCC-CeEEEEECCCCcEEEEEcCCC
Confidence 57888999999998 8899999999999888665 9999999998 78899999977 899999999999999999999
Q ss_pred ccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEE---E-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC
Q 014755 91 AGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACV---H-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT 166 (419)
Q Consensus 91 ~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~---~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~ 166 (419)
..|.+++|++ ..+++++.++ .|++||+++++.. . +..+...+.+++| +++++++++.| |.|++||+++
T Consensus 214 ~~v~~l~~~~--~~l~s~s~dg-~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~d---g~i~vwd~~~ 285 (435)
T 1p22_A 214 EAVLHLRFNN--GMMVTCSKDR-SIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGD---RTIKVWNTST 285 (435)
T ss_dssp SCEEEEECCT--TEEEEEETTS-CEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETT---SEEEEEETTT
T ss_pred CcEEEEEEcC--CEEEEeeCCC-cEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCC---CeEEEEECCc
Confidence 9999999974 5899999887 9999999986543 2 6778888999998 78899999987 8999999999
Q ss_pred CeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCc
Q 014755 167 WEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQT 245 (419)
Q Consensus 167 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~ 245 (419)
++.+..+..|...+.++.+ +++.+++ ++.|+.|++||+ +++.+..+..|.. .|.+++| ++++|++|+.||.
T Consensus 286 ~~~~~~~~~~~~~v~~~~~--~~~~l~~--g~~dg~i~iwd~~~~~~~~~~~~h~~--~v~~~~~--~~~~l~sg~~dg~ 357 (435)
T 1p22_A 286 CEFVRTLNGHKRGIACLQY--RDRLVVS--GSSDNTIRLWDIECGACLRVLEGHEE--LVRCIRF--DNKRIVSGAYDGK 357 (435)
T ss_dssp CCEEEEEECCSSCEEEEEE--ETTEEEE--EETTSCEEEEETTTCCEEEEECCCSS--CEEEEEC--CSSEEEEEETTSC
T ss_pred CcEEEEEcCCCCcEEEEEe--CCCEEEE--EeCCCeEEEEECCCCCEEEEEeCCcC--cEEEEEe--cCCEEEEEeCCCc
Confidence 9999999999999999998 4677887 667999999999 7888888887766 8999998 7889999999999
Q ss_pred EEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCC
Q 014755 246 LRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKP 325 (419)
Q Consensus 246 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (419)
|++||+.+++....... .. .
T Consensus 358 i~vwd~~~~~~~~~~~~---------~~---------------------------------------------------~ 377 (435)
T 1p22_A 358 IKVWDLVAALDPRAPAG---------TL---------------------------------------------------C 377 (435)
T ss_dssp EEEEEHHHHTSTTSCTT---------TT---------------------------------------------------E
T ss_pred EEEEECCCCCCcccccc---------ch---------------------------------------------------h
Confidence 99999876541110000 00 0
Q ss_pred CCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecccCCCeeEEEeCC
Q 014755 326 PTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILVQKDPIRAATWDP 386 (419)
Q Consensus 326 ~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~ 386 (419)
...+.+|...|.+++| ++++|++++.| |.|++||+.+...........+..++.|.+
T Consensus 378 ~~~~~~h~~~v~~l~~--~~~~l~s~s~D--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 434 (435)
T 1p22_A 378 LRTLVEHSGRVFRLQF--DEFQIVSSSHD--DTILIWDFLNDPAAQAEPPRSPSRTYTYIS 434 (435)
T ss_dssp EEEECCCSSCCCCEEE--CSSCEEECCSS--SEEEEEC-----------------------
T ss_pred eeeccCCCCCeEEEEe--CCCEEEEEeCC--CEEEEEECCCCCCcccCCCCCCccceeeec
Confidence 0002247788999999 78899999999 999999999877655554555566666543
No 101
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=6.2e-37 Score=267.53 Aligned_cols=273 Identities=13% Similarity=0.083 Sum_probs=230.4
Q ss_pred cccccC---eEEcCCCCEEEEEe-CCeEEEEecCCCc----EEEEeecCcceeEEEEecCCC-eEEEEeccCCeEEEEEc
Q 014755 7 YKQTGP---SCFSPNARYIAVAV-DYRLVVRDAHSFK----VVQLFSCLDKISYIEWALDSE-YILCGLYKRLMIQAWSL 77 (419)
Q Consensus 7 ~~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~~----~~~~~~~~~~v~~~~~s~~~~-~l~~~~~~~g~i~iw~~ 77 (419)
.+|.+. ++|+|++++|++++ ++.|++|++.+++ ......|...|.+++|+|+++ +|++++.+ |.|++||+
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-g~i~~wd~ 86 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQ-GEILKVDL 86 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETT-SCEEEECS
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCC-CeEEEEEe
Confidence 456555 88999999999998 8999999999888 666778999999999999999 99999976 89999999
Q ss_pred -cCCcceeeeec--CCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC---------CeEEEeccCCCCeeeEEEccCCC
Q 014755 78 -TQPEWTCKIDE--GLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN---------TACVHVQSPKHASKGVAFTQDGK 145 (419)
Q Consensus 78 -~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 145 (419)
.+++. ..+.. |...|.+++|+| ++.+++++.++ .|++||+++ +++.....+...+.+++|+|++
T Consensus 87 ~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~- 162 (342)
T 1yfq_A 87 IGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDG-LIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR- 162 (342)
T ss_dssp SSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTS-EEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE-
T ss_pred ccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCC-eEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc-
Confidence 77754 57778 999999999999 99999999988 999999987 6655534478889999999987
Q ss_pred EEEEEeecCCCCeEEEEeccC-Ce--EEEEEeccccceeeeeECC-CCCeEEEEcCCCCceEEEEcC-CC------ceEE
Q 014755 146 FAAICTRRDCKDYINLLSCHT-WE--IMGVFAVDTLDLADIEWSP-DDSAIVIWDSPLEYKVLIYSP-DG------RCLL 214 (419)
Q Consensus 146 ~l~~~~~~~~~g~v~i~d~~~-~~--~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~i~~~d~-~~------~~~~ 214 (419)
+++++.+ +.|++||+++ +. .......+...+.+++|+| +++.+++ ++.++.+++|+. .. +...
T Consensus 163 -l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~--~~~dg~i~i~~~~~~~~~~~~~~~~ 236 (342)
T 1yfq_A 163 -LIVGMNN---SQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYAC--SSIDGRVAVEFFDDQGDDYNSSKRF 236 (342)
T ss_dssp -EEEEEST---TEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEE--EETTSEEEEEECCTTCCSTTCTTCE
T ss_pred -EEEEeCC---CeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEE--EecCCcEEEEEEcCCCcccccccce
Confidence 7888776 8999999998 44 3334456778899999999 9999998 566999999999 43 6777
Q ss_pred EEeecCC-------CCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccce
Q 014755 215 KYQAYES-------GLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMS 287 (419)
Q Consensus 215 ~~~~~~~-------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (419)
.+..+.. ...|.+++|+|++++|++++.||.|++||+.+++.+..+.
T Consensus 237 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-------------------------- 290 (342)
T 1yfq_A 237 AFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFA-------------------------- 290 (342)
T ss_dssp EEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC--------------------------
T ss_pred eeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhh--------------------------
Confidence 7776643 3379999999999999999999999999999988776653
Q ss_pred eeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCC-CcceEEEEEccCCeEEEEecCCCCce-EEEee
Q 014755 288 ELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNP-KQGIGLMSWSSDSQYICTRNDSMPTT-LWIWD 363 (419)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~g~~l~~~~~d~~~~-i~iwd 363 (419)
.| ...|.+++ |++++|++++.| |. .+.|.
T Consensus 291 -------------------------------------------~~h~~~v~~~~--~~~~~l~s~s~D--g~~~~~~~ 321 (342)
T 1yfq_A 291 -------------------------------------------KFNEDSVVKIA--CSDNILCLATSD--DTFKTNAA 321 (342)
T ss_dssp -------------------------------------------CCSSSEEEEEE--ECSSEEEEEEEC--THHHHCSS
T ss_pred -------------------------------------------cccCCCceEec--CCCCeEEEEecC--Cccccccc
Confidence 34 67789998 999999999999 88 55554
No 102
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2.5e-37 Score=275.97 Aligned_cols=285 Identities=13% Similarity=0.171 Sum_probs=231.3
Q ss_pred ceeEEEEecCCCeEEEEeccCCeEEEEEccCC----cceeeeecCCccEeEEEECC-CCCEEEEEecCCCeEEEEEcCCC
Q 014755 49 KISYIEWALDSEYILCGLYKRLMIQAWSLTQP----EWTCKIDEGLAGIAYARWSP-DSRHILTTSDFQLRLTVWSLLNT 123 (419)
Q Consensus 49 ~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~----~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~i~iwd~~~~ 123 (419)
....++++|+...+++.+..+|.|+||++... +....+.+|...|.+++|+| ++++|++++.|+ .|++||+.++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg-~v~vw~~~~~ 114 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDC-TVMVWEIPDG 114 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTS-EEEEEECCTT
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCC-eEEEEEccCC
Confidence 34568889887666553334489999999654 23445778999999999999 999999999987 9999999986
Q ss_pred -------eEEE-eccCCCCeeeEEEccCC-CEEEEEeecCCCCeEEEEeccCCeEEEEE--eccccceeeeeECCCCCeE
Q 014755 124 -------ACVH-VQSPKHASKGVAFTQDG-KFAAICTRRDCKDYINLLSCHTWEIMGVF--AVDTLDLADIEWSPDDSAI 192 (419)
Q Consensus 124 -------~~~~-~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~g~v~i~d~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l 192 (419)
+... +..|...+.+++|+|++ .+|++++.| +.|++||+++++.+..+ ..|...|.+++|+|+++++
T Consensus 115 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 191 (402)
T 2aq5_A 115 GLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD---NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALI 191 (402)
T ss_dssp CCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT---SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCE
T ss_pred CCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC---CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEE
Confidence 3333 77899999999999998 688998886 89999999999999998 7899999999999999999
Q ss_pred EEEcCCCCceEEEEcC-CCceEEEE-eecCCCCceeEEEEccCCCeEEEE---EecCcEEEEEcCCcee-eeeecccccc
Q 014755 193 VIWDSPLEYKVLIYSP-DGRCLLKY-QAYESGLGVKSISWSPCGQFLAVG---SYDQTLRVLNHLTWKT-FAEFMHLSTV 266 (419)
Q Consensus 193 ~~~~~~~~~~i~~~d~-~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~~~---~~d~~i~v~d~~~~~~-~~~~~~~~~~ 266 (419)
++ ++.|+.|++||+ +++.+..+ ..+.. ..+.+++|+|++++|+++ +.|+.|++||+.+++. +....
T Consensus 192 ~~--~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~----- 263 (402)
T 2aq5_A 192 CT--SCRDKRVRVIEPRKGTVVAEKDRPHEG-TRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQE----- 263 (402)
T ss_dssp EE--EETTSEEEEEETTTTEEEEEEECSSCS-SSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEE-----
T ss_pred EE--EecCCcEEEEeCCCCceeeeeccCCCC-CcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEe-----
Confidence 98 667999999999 77777777 45443 248999999999999999 7899999999987553 11111
Q ss_pred cCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCe
Q 014755 267 RGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQ 346 (419)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 346 (419)
..|...+.+++|+|+++
T Consensus 264 ---------------------------------------------------------------~~~~~~v~~~~~s~~~~ 280 (402)
T 2aq5_A 264 ---------------------------------------------------------------LDTSSGVLLPFFDPDTN 280 (402)
T ss_dssp ---------------------------------------------------------------CCCCSSCEEEEEETTTT
T ss_pred ---------------------------------------------------------------ccCCCceeEEEEcCCCC
Confidence 02455689999999999
Q ss_pred EEEE-ecCCCCceEEEeeccCCCc-eeec---ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEEe
Q 014755 347 YICT-RNDSMPTTLWIWDICRQEP-AAIL---VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCVS 412 (419)
Q Consensus 347 ~l~~-~~~d~~~~i~iwd~~~~~~-~~~~---~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~ 412 (419)
+|++ ++.| +.|++||+.+++. ...+ .|...|++++|+|++.++++ .++.+++|++.++++..
T Consensus 281 ~l~~~g~~d--g~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~~~ 347 (402)
T 2aq5_A 281 IVYLCGKGD--SSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKCEP 347 (402)
T ss_dssp EEEEEETTC--SCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEEEE
T ss_pred EEEEEEcCC--CeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCCcEEE
Confidence 9875 5567 9999999999883 3222 35689999999999998864 56799999999876643
No 103
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1e-36 Score=272.06 Aligned_cols=281 Identities=11% Similarity=0.148 Sum_probs=226.2
Q ss_pred eEEcCCCCEEEE-Ee-CCeEEEEecCCCcE----E-EEeecCcceeEEEEec-CCCeEEEEeccCCeEEEEEccCC----
Q 014755 13 SCFSPNARYIAV-AV-DYRLVVRDAHSFKV----V-QLFSCLDKISYIEWAL-DSEYILCGLYKRLMIQAWSLTQP---- 80 (419)
Q Consensus 13 ~~~s~d~~~la~-~~-~~~i~i~~~~~~~~----~-~~~~~~~~v~~~~~s~-~~~~l~~~~~~~g~i~iw~~~~~---- 80 (419)
++++|+...++. ++ ++.|+||++..... . ...+|.+.|.+++|+| ++++|++++.| |+|++||+.++
T Consensus 40 ~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d-g~v~vw~~~~~~~~~ 118 (402)
T 2aq5_A 40 CAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSED-CTVMVWEIPDGGLVL 118 (402)
T ss_dssp EEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETT-SEEEEEECCTTCCSS
T ss_pred EEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCC-CeEEEEEccCCCCcc
Confidence 778887765554 34 88999999865421 2 2345999999999999 99999999976 89999999987
Q ss_pred ---cceeeeecCCccEeEEEECCCC-CEEEEEecCCCeEEEEEcCCCeEEE-e--ccCCCCeeeEEEccCCCEEEEEeec
Q 014755 81 ---EWTCKIDEGLAGIAYARWSPDS-RHILTTSDFQLRLTVWSLLNTACVH-V--QSPKHASKGVAFTQDGKFAAICTRR 153 (419)
Q Consensus 81 ---~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~~i~iwd~~~~~~~~-~--~~~~~~~~~~~~~~~~~~l~~~~~~ 153 (419)
+.+..+.+|...|.+++|+|++ ..|++++.|+ .|++||+++++... + ..|...+.+++|+|++++|++++.|
T Consensus 119 ~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 197 (402)
T 2aq5_A 119 PLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN-VILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD 197 (402)
T ss_dssp CBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS-CEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT
T ss_pred ccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC-EEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC
Confidence 5677888999999999999998 6889998887 99999999998887 6 6788999999999999999999987
Q ss_pred CCCCeEEEEeccCCeEEEEE-eccccc-eeeeeECCCCCeEEEE-cCCCCceEEEEcC-CCce-EEEEeecCCCCceeEE
Q 014755 154 DCKDYINLLSCHTWEIMGVF-AVDTLD-LADIEWSPDDSAIVIW-DSPLEYKVLIYSP-DGRC-LLKYQAYESGLGVKSI 228 (419)
Q Consensus 154 ~~~g~v~i~d~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~l~~~-~~~~~~~i~~~d~-~~~~-~~~~~~~~~~~~v~~~ 228 (419)
+.|++||+++++.+..+ ..|... +.++.|+|+++++++. +...++.|++||+ +++. +.... ..+...+.++
T Consensus 198 ---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~v~~~ 273 (402)
T 2aq5_A 198 ---KRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQE-LDTSSGVLLP 273 (402)
T ss_dssp ---SEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEE-CCCCSSCEEE
T ss_pred ---CcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEe-ccCCCceeEE
Confidence 89999999999999888 677665 8999999999988872 1157899999999 4443 33332 2233379999
Q ss_pred EEccCCCeEEEE-EecCcEEEEEcCCcee-eeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCc
Q 014755 229 SWSPCGQFLAVG-SYDQTLRVLNHLTWKT-FAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGH 306 (419)
Q Consensus 229 ~~s~~~~~l~~~-~~d~~i~v~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (419)
+|+|++++|+++ +.|+.|++||+.+++. +..+...
T Consensus 274 ~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~------------------------------------------- 310 (402)
T 2aq5_A 274 FFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMF------------------------------------------- 310 (402)
T ss_dssp EEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEE-------------------------------------------
T ss_pred EEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeeccc-------------------------------------------
Confidence 999999998754 4799999999988764 3333200
Q ss_pred eEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCce
Q 014755 307 IKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPA 370 (419)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~ 370 (419)
.|...|.+++|+|++.++++ .+ +.+++|++.++++.
T Consensus 311 ------------------------~~~~~v~~~~~sp~~~~~~s--~~--~~~~~~~l~~~~~~ 346 (402)
T 2aq5_A 311 ------------------------SSKESQRGMGYMPKRGLEVN--KC--EIARFYKLHERKCE 346 (402)
T ss_dssp ------------------------CCSSCCSEEEECCGGGSCGG--GT--EEEEEEEEETTEEE
T ss_pred ------------------------ccCCcccceEEeccccccee--cc--eeEEEEEcCCCcEE
Confidence 14456889999999998875 34 78999999987654
No 104
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.3e-38 Score=284.57 Aligned_cols=274 Identities=9% Similarity=0.072 Sum_probs=210.7
Q ss_pred cEEEEeecCcceeEEEEecCC---------CeEEEE-------------------eccCCeEEEEEccCCcce----eee
Q 014755 39 KVVQLFSCLDKISYIEWALDS---------EYILCG-------------------LYKRLMIQAWSLTQPEWT----CKI 86 (419)
Q Consensus 39 ~~~~~~~~~~~v~~~~~s~~~---------~~l~~~-------------------~~~~g~i~iw~~~~~~~~----~~~ 86 (419)
+....+.+.+.|.+|+|+|++ ++||++ +.| ++|+||++.+++.. ..+
T Consensus 125 r~~~~~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D-~tI~iWd~~~~~~~~~~~~~l 203 (524)
T 2j04_B 125 RRGFIYNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHS-SCIQIFKMNTSTLHCVKVQTI 203 (524)
T ss_dssp SCEEEEECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------C-EEEEEEEEETTTCCEEEEEEE
T ss_pred cceEEEECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCC-ceEEEEEccCCCCCceEEEEE
Confidence 334445566677777777765 566554 444 79999999887643 235
Q ss_pred ecCCccEeEEEECCC------CCEEEEEecCCCeEEEEEcCCCeE------------EEeccCCCCeeeEEEccCCCEEE
Q 014755 87 DEGLAGIAYARWSPD------SRHILTTSDFQLRLTVWSLLNTAC------------VHVQSPKHASKGVAFTQDGKFAA 148 (419)
Q Consensus 87 ~~~~~~v~~~~~~~~------~~~l~~~~~~~~~i~iwd~~~~~~------------~~~~~~~~~~~~~~~~~~~~~l~ 148 (419)
..|.+.|.+++|+|+ +.+|++++.|+ +|++||+..++. ..+..|...+.+++|++++ .|+
T Consensus 204 ~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~Dg-tvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~la 281 (524)
T 2j04_B 204 VHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEG-TINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVV 281 (524)
T ss_dssp EECCCSEEEEEECSSCCCSSSSCEEEEEETTS-CEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEE
T ss_pred EecCCcEEEEEECCCCCCCCCCceEEEEecCC-eEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEE
Confidence 567788999999997 57899999987 999999987531 1356778899999999864 799
Q ss_pred EEeecCCCCeEEEEeccCCe-EEEEEeccccceeee--eECCCC-CeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCC
Q 014755 149 ICTRRDCKDYINLLSCHTWE-IMGVFAVDTLDLADI--EWSPDD-SAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGL 223 (419)
Q Consensus 149 ~~~~~~~~g~v~i~d~~~~~-~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~ 223 (419)
+|+.| |+|++||+++++ +...+..|...|.++ .|+|++ .++++ ++.|++|++||+ +++.+..+..+....
T Consensus 282 sgs~D---gtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS--~S~D~tvklWD~~~~~~~~~~~~~~~~~ 356 (524)
T 2j04_B 282 CGFKN---GFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVST--VAVDGYFYIFNPKDIATTKTTVSRFRGS 356 (524)
T ss_dssp EEETT---SEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEE--EETTSEEEEECGGGHHHHCEEEEECSCC
T ss_pred EEeCC---CEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEE--eccCCeEEEEECCCCCcccccccccccC
Confidence 99887 899999999763 455688899999999 678887 77887 677999999999 666666666554322
Q ss_pred ceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCcccccccccc
Q 014755 224 GVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDAT 303 (419)
Q Consensus 224 ~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (419)
.|.+++|+|+++.+++++.|++|++||++++.++..+.
T Consensus 357 ~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~------------------------------------------ 394 (524)
T 2j04_B 357 NLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLV------------------------------------------ 394 (524)
T ss_dssp SCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEE------------------------------------------
T ss_pred cccceEeCCCcCeEEEeCCCCcEEEEECcccccceeee------------------------------------------
Confidence 58899999999999999999999999998876655432
Q ss_pred CCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc-----cCCC
Q 014755 304 NGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV-----QKDP 378 (419)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~-----~~~~ 378 (419)
+|...|++++|||+|++|++|+.| ++|++||+..+.+..... +...
T Consensus 395 ---------------------------gH~~~V~sva~Sp~g~~l~Sgs~D--gtv~lwd~~~~~~~~~~~~~~~~~~~~ 445 (524)
T 2j04_B 395 ---------------------------SRETTITAIGVSRLHPMVLAGSAD--GSLIITNAARRLLHGIKNSSATQKSLR 445 (524)
T ss_dssp ---------------------------ECSSCEEEEECCSSCCBCEEEETT--TEEECCBSCSSTTTCC------CCCCE
T ss_pred ---------------------------cCCCceEEEEeCCCCCeEEEEECC--CEEEEEechHhhccccccCccceeeeE
Confidence 377889999999999999999999 999999987642221111 1225
Q ss_pred eeEEEeCCCCCeE
Q 014755 379 IRAATWDPTCTRL 391 (419)
Q Consensus 379 v~~~~~s~~~~~l 391 (419)
|++++|+|+++.+
T Consensus 446 v~~v~~sp~g~~~ 458 (524)
T 2j04_B 446 LWKWDYSIKDDKY 458 (524)
T ss_dssp EEECBCCSSSCEE
T ss_pred EEEeccCCCCCeE
Confidence 7899999999855
No 105
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=5.9e-37 Score=263.95 Aligned_cols=246 Identities=12% Similarity=0.149 Sum_probs=197.5
Q ss_pred eecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCc--ceeeeecCCccEeEEEECC--CCCEEEEEecCCCeEEEEE
Q 014755 44 FSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPE--WTCKIDEGLAGIAYARWSP--DSRHILTTSDFQLRLTVWS 119 (419)
Q Consensus 44 ~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~~i~iwd 119 (419)
.+|.+.|++++|+|+|++|++++.| ++|+|||+.+++ .+..+.+|..+|.+++|+| ++++|++++.|+ +|++||
T Consensus 10 ~~H~~~V~~v~~s~~g~~lasgs~D-~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~-~v~iWd 87 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYGTRLATCSSD-RSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDR-KVIIWR 87 (316)
T ss_dssp ----CCEEEEEECGGGCEEEEEETT-TEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTS-CEEEEC
T ss_pred ccccCeEEEeeEcCCCCEEEEEeCC-CeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCC-EEEEEE
Confidence 3699999999999999999999977 899999998874 4567889999999999986 489999999988 999999
Q ss_pred cCCCe--EEE-eccCCCCeeeEEEccC--CCEEEEEeecCCCCeEEEEeccCCe---EEEEEeccccceeeeeECCC---
Q 014755 120 LLNTA--CVH-VQSPKHASKGVAFTQD--GKFAAICTRRDCKDYINLLSCHTWE---IMGVFAVDTLDLADIEWSPD--- 188 (419)
Q Consensus 120 ~~~~~--~~~-~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~g~v~i~d~~~~~---~~~~~~~~~~~v~~~~~~~~--- 188 (419)
+++++ ... +..|...|.+++|+|+ +.+|++++.| +.|++||++.+. ....+..|...+.+++|+|+
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D---~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 164 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSD---GAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVP 164 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSS---SCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCC---CCEEEEecCCCCCcceeeeeccccCCcceEEEccccCC
Confidence 99863 333 6788899999999998 7899999887 899999998753 23445678888999999998
Q ss_pred --------------CCeEEEEcCCCCceEEEEcCC-C---ceEEEEeecCCCCceeEEEEccCC----CeEEEEEecCcE
Q 014755 189 --------------DSAIVIWDSPLEYKVLIYSPD-G---RCLLKYQAYESGLGVKSISWSPCG----QFLAVGSYDQTL 246 (419)
Q Consensus 189 --------------~~~l~~~~~~~~~~i~~~d~~-~---~~~~~~~~~~~~~~v~~~~~s~~~----~~l~~~~~d~~i 246 (419)
++++++ ++.|+.|++||+. + +.+..+..|.. .|.+++|+|++ ++|++++.|++|
T Consensus 165 ~~~~~~~~~~~~~~~~~l~s--gs~D~~v~lWd~~~~~~~~~~~~l~~h~~--~V~~v~~sp~~~~~~~~las~s~D~~v 240 (316)
T 3bg1_A 165 GSLIDHPSGQKPNYIKRFAS--GGCDNLIKLWKEEEDGQWKEEQKLEAHSD--WVRDVAWAPSIGLPTSTIASCSQDGRV 240 (316)
T ss_dssp ------CCSCCCCCCCBEEC--CBTTSBCCEEEECTTSCEEEEECCBCCSS--CEEEEECCCCSSCSCCEEEEEETTCEE
T ss_pred ccccccccccCccccceEEE--ecCCCeEEEEEeCCCCccceeeecccCCC--ceEEEEecCCCCCCCceEEEEcCCCeE
Confidence 356776 7789999999993 3 24455555554 89999999987 789999999999
Q ss_pred EEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCC
Q 014755 247 RVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPP 326 (419)
Q Consensus 247 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (419)
++|++.+........ ..
T Consensus 241 ~iw~~~~~~~~~~~~-----------~~---------------------------------------------------- 257 (316)
T 3bg1_A 241 FIWTCDDASSNTWSP-----------KL---------------------------------------------------- 257 (316)
T ss_dssp EEEECSSTTCCCCBC-----------CE----------------------------------------------------
T ss_pred EEEEccCccccchhh-----------hh----------------------------------------------------
Confidence 999987521100000 00
Q ss_pred CCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeecc
Q 014755 327 TDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDIC 365 (419)
Q Consensus 327 ~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~ 365 (419)
+..|...|.+++|+|+|++||+++.| +.|+||+..
T Consensus 258 --~~~~~~~v~~v~~sp~g~~las~~~D--~~v~lw~~~ 292 (316)
T 3bg1_A 258 --LHKFNDVVWHVSWSITANILAVSGGD--NKVTLWKES 292 (316)
T ss_dssp --EEECSSCEEEEEECTTTCCEEEEESS--SCEEEEEEC
T ss_pred --hhcCCCcEEEEEEcCCCCEEEEEcCC--CeEEEEEEC
Confidence 01266779999999999999999999 999999975
No 106
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-36 Score=269.17 Aligned_cols=251 Identities=15% Similarity=0.266 Sum_probs=208.9
Q ss_pred cceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC--CeEEE-eccCCCCeeeEEEccC--CCEEEEEeecCC
Q 014755 81 EWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN--TACVH-VQSPKHASKGVAFTQD--GKFAAICTRRDC 155 (419)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~--~~~~~-~~~~~~~~~~~~~~~~--~~~l~~~~~~~~ 155 (419)
+.+..+.+|...|.+++|+|++++|++++.++ .|++||+.. ++... +..|...+.+++|+++ +++|++++.|
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg-~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d-- 78 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDK-TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-- 78 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTS-CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT--
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCC-cEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC--
Confidence 45667889999999999999999999999887 999999984 44444 7789999999999977 8999999987
Q ss_pred CCeEEEEeccCCe--EEEEEeccccceeeeeECCC--CCeEEEEcCCCCceEEEEcC-CCc--eEEEEeecCCCCceeEE
Q 014755 156 KDYINLLSCHTWE--IMGVFAVDTLDLADIEWSPD--DSAIVIWDSPLEYKVLIYSP-DGR--CLLKYQAYESGLGVKSI 228 (419)
Q Consensus 156 ~g~v~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~~~i~~~d~-~~~--~~~~~~~~~~~~~v~~~ 228 (419)
|.|++||+++++ .+..+..|...|.+++|+|+ +..+++ ++.++.|++||+ .+. ....+..+. ..|.++
T Consensus 79 -g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~--~~~d~~i~v~d~~~~~~~~~~~~~~~~--~~v~~~ 153 (379)
T 3jrp_A 79 -GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLV--ASSDGKVSVVEFKENGTTSPIIIDAHA--IGVNSA 153 (379)
T ss_dssp -SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEE--EETTSEEEEEECCTTSCCCEEEEECCT--TCEEEE
T ss_pred -CEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEE--ecCCCcEEEEecCCCCceeeEEecCCC--CceEEE
Confidence 899999999987 67777888999999999999 889888 667999999999 442 333444444 489999
Q ss_pred EEcc-------------CCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCcc
Q 014755 229 SWSP-------------CGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDF 295 (419)
Q Consensus 229 ~~s~-------------~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (419)
+|+| +++++++++.|+.|++||+++++....+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--------------------------------- 200 (379)
T 3jrp_A 154 SWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLES--------------------------------- 200 (379)
T ss_dssp EECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEE---------------------------------
T ss_pred EEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEE---------------------------------
Confidence 9999 699999999999999999986543322110
Q ss_pred ccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccC---CeEEEEecCCCCceEEEeeccCCC---c
Q 014755 296 IQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSD---SQYICTRNDSMPTTLWIWDICRQE---P 369 (419)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---g~~l~~~~~d~~~~i~iwd~~~~~---~ 369 (419)
.+.+|...|.+++|+|+ +++|++++.| +.|++||+.+++ .
T Consensus 201 --------------------------------~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d--g~i~iwd~~~~~~~~~ 246 (379)
T 3jrp_A 201 --------------------------------TLEGHSDWVRDVAWSPTVLLRSYLASVSQD--RTCIIWTQDNEQGPWK 246 (379)
T ss_dssp --------------------------------EECCCSSCEEEEEECCCCSSSEEEEEEETT--SCEEEEEESSTTSCCE
T ss_pred --------------------------------EEecccCcEeEEEECCCCCCCCeEEEEeCC--CEEEEEeCCCCCccce
Confidence 01247888999999999 9999999999 999999999874 2
Q ss_pred eeec---ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 370 AAIL---VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 370 ~~~~---~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
.... .|...|++++|+|++++|++++.||.|++|++.
T Consensus 247 ~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 247 KTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp EEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred eeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 2222 388899999999999999999999999999997
No 107
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=9.6e-36 Score=260.48 Aligned_cols=290 Identities=12% Similarity=0.092 Sum_probs=214.0
Q ss_pred EEecCCCcEEEE-eecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEec
Q 014755 32 VRDAHSFKVVQL-FSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSD 110 (419)
Q Consensus 32 i~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 110 (419)
||++.+.+.+.. ..|.+.|.+++|+|||++|++|+.+ .+++|++++++...... ...+..+++.++++.++.++.
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~--~~~iw~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 78 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLK--SFEIYNVHPVAHIMSQE--MRHLSKVRMLHRTNYVAFVTG 78 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSS--EEEEEEETTEEEEEEEE--CSCCCEEEECTTSSEEEEECS
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCC--EEEEEecCCcceeeeee--cCCeEEEEEcCCCCEEEEEEC
Confidence 456666665543 3489999999999999999998743 58999998776554432 235788899999998866544
Q ss_pred CCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCC-eEEEEEeccccceeeeeECCCC
Q 014755 111 FQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTW-EIMGVFAVDTLDLADIEWSPDD 189 (419)
Q Consensus 111 ~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~ 189 (419)
.++.|++||+.+++.+....+...+.+++++++. ++++. + +.|++||+.++ +.+..+.. +...+++++
T Consensus 79 ~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~~-~---~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~-- 147 (355)
T 3vu4_A 79 VKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREF--IVVSY-G---DVISVFKFGNPWKRITDDIR---FGGVCEFSN-- 147 (355)
T ss_dssp STTEEEEEETTTTEEEEEEECSSCEEEEEECSSE--EEEEE-T---TEEEEEESSTTCCBSSCCEE---EEEEEEEET--
T ss_pred CccEEEEEECCCCcEEEEEECCCceEEEEEcCCE--EEEEE-c---CEEEEEECCCCceeeEEecc---CCceEEEEc--
Confidence 3349999999999988844567789999998764 44444 3 69999999987 66665554 334455666
Q ss_pred CeEEEEcCCCCceEEEEcC-CCc----------------eEEEEeecCCCCceeEEEEccCCCeEEEEEecCc-EEEEEc
Q 014755 190 SAIVIWDSPLEYKVLIYSP-DGR----------------CLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQT-LRVLNH 251 (419)
Q Consensus 190 ~~l~~~~~~~~~~i~~~d~-~~~----------------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~-i~v~d~ 251 (419)
..+++..+..++.|++||+ +++ .+..+..|.. .|.+++|+|+|++|++++.|++ |++||+
T Consensus 148 ~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~--~v~~~~~s~~g~~l~s~s~d~~~v~iwd~ 225 (355)
T 3vu4_A 148 GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTN--PIKMVRLNRKSDMVATCSQDGTIIRVFKT 225 (355)
T ss_dssp TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSS--CEEEEEECTTSSEEEEEETTCSEEEEEET
T ss_pred cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCC--ceEEEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 6777654677999999999 443 1566776665 8999999999999999999998 999999
Q ss_pred CCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCC
Q 014755 252 LTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPN 331 (419)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (419)
++++++..+.. ..
T Consensus 226 ~~~~~~~~~~~-------------------------------------------------------------------g~ 238 (355)
T 3vu4_A 226 EDGVLVREFRR-------------------------------------------------------------------GL 238 (355)
T ss_dssp TTCCEEEEEEC-------------------------------------------------------------------TT
T ss_pred CCCcEEEEEEc-------------------------------------------------------------------CC
Confidence 99988777630 01
Q ss_pred CCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCcee--ec----------------------ccCCCeeEEEeCCC
Q 014755 332 PKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAA--IL----------------------VQKDPIRAATWDPT 387 (419)
Q Consensus 332 ~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~--~~----------------------~~~~~v~~~~~s~~ 387 (419)
|...|.+++|+|+|++|++++.| ++|+|||+..+.... .+ .+......++|++|
T Consensus 239 h~~~v~~~~~s~~~~~l~s~s~d--~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d 316 (355)
T 3vu4_A 239 DRADVVDMKWSTDGSKLAVVSDK--WTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISE 316 (355)
T ss_dssp CCSCEEEEEECTTSCEEEEEETT--CEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSS
T ss_pred CCCcEEEEEECCCCCEEEEEECC--CEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCC
Confidence 66779999999999999999999 999999997653211 10 01223477999999
Q ss_pred CCeEEEEeCCCcEEEeecCC
Q 014755 388 CTRLVLCTGSSHLYMWTPSG 407 (419)
Q Consensus 388 ~~~l~s~~~dg~i~vw~~~~ 407 (419)
+++|++++.||.+++|++..
T Consensus 317 ~~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 317 SSLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp SEEEEEETTTTEEEEEEEEE
T ss_pred CCEEEEEeCCCeEEEEEEEc
Confidence 99999999999999999863
No 108
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=100.00 E-value=1.6e-34 Score=265.17 Aligned_cols=323 Identities=11% Similarity=0.090 Sum_probs=251.5
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEc--cCCcceeeeecC
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSL--TQPEWTCKIDEG 89 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~--~~~~~~~~~~~~ 89 (419)
-+|+|+++++++.+ +++|.+||..+++++..+.....+..++|+|||++|++++.+ ++|++||+ .+++.+..+. +
T Consensus 143 ~~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d-~~V~v~D~~~~t~~~~~~i~-~ 220 (543)
T 1nir_A 143 NDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRD-ARIDMIDLWAKEPTKVAEIK-I 220 (543)
T ss_dssp SCCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETT-SEEEEEETTSSSCEEEEEEE-C
T ss_pred cccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCC-CeEEEEECcCCCCcEEEEEe-c
Confidence 45899998888887 788999999999999888733348999999999999999987 89999999 7888877776 4
Q ss_pred CccEeEEEECC----CCCEEEEEecCCCeEEEEEcCCCeEEE-eccC-----------CCCeeeEEEccCCCEEEEEeec
Q 014755 90 LAGIAYARWSP----DSRHILTTSDFQLRLTVWSLLNTACVH-VQSP-----------KHASKGVAFTQDGKFAAICTRR 153 (419)
Q Consensus 90 ~~~v~~~~~~~----~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~-----------~~~~~~~~~~~~~~~l~~~~~~ 153 (419)
...+..++|+| ||+++++++...++|.+||..+++++. +... ...+.++.++|++..+++...+
T Consensus 221 g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~ 300 (543)
T 1nir_A 221 GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE 300 (543)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC
Confidence 45679999999 999999998644499999999988877 3321 2367899999998877766644
Q ss_pred CCCCeEEEEeccCCeEEE--EEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecC--CCCceeEE
Q 014755 154 DCKDYINLLSCHTWEIMG--VFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYE--SGLGVKSI 228 (419)
Q Consensus 154 ~~~g~v~i~d~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~--~~~~v~~~ 228 (419)
.+.|.+||..+.+.+. .+. +...+..+.|+|+|+++++.. ..+++|.+||. +++++..+.... +......+
T Consensus 301 --~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~-~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~ 376 (543)
T 1nir_A 301 --TGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAA-NNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF 376 (543)
T ss_dssp --TTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEE-GGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE
T ss_pred --CCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEe-cCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc
Confidence 4899999998765433 332 456688999999999887643 44789999999 888887776421 21122223
Q ss_pred EEccC-CCeEEEEE-ecCcEEEEEcCC-------ceeeeeecccccccCCCccceeccCCCcccccceeeeccCcccccc
Q 014755 229 SWSPC-GQFLAVGS-YDQTLRVLNHLT-------WKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGN 299 (419)
Q Consensus 229 ~~s~~-~~~l~~~~-~d~~i~v~d~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (419)
++|+ +..++++. .|++|.+||+.+ +++++++.
T Consensus 377 -~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~-------------------------------------- 417 (543)
T 1nir_A 377 -VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQ-------------------------------------- 417 (543)
T ss_dssp -EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEE--------------------------------------
T ss_pred -CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEE--------------------------------------
Confidence 4677 56666665 579999999987 56666553
Q ss_pred ccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecC-------CCCceEEEeeccCCCce-e
Q 014755 300 SDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRND-------SMPTTLWIWDICRQEPA-A 371 (419)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-------d~~~~i~iwd~~~~~~~-~ 371 (419)
.|...+..++++|||++|++++. + ++|.+||+.+++.. .
T Consensus 418 -------------------------------~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~--~~v~v~d~~~~~~~~~ 464 (543)
T 1nir_A 418 -------------------------------GQGGGSLFIKTHPKSSHLYVDTTFNPDARIS--QSVAVFDLKNLDAKYQ 464 (543)
T ss_dssp -------------------------------CSCSCCCCEECCTTCCEEEECCTTCSSHHHH--TCEEEEETTCTTSCCE
T ss_pred -------------------------------cCCCCceEEEcCCCCCcEEEecCCCCCcccC--ceEEEEECCCCCCCeE
Confidence 24445667899999999999872 4 79999999998876 4
Q ss_pred ec---------ccCCCeeEEEeCCCCCeEEEEe-----CCCcEEEeecCCCeEEec
Q 014755 372 IL---------VQKDPIRAATWDPTCTRLVLCT-----GSSHLYMWTPSGAYCVSN 413 (419)
Q Consensus 372 ~~---------~~~~~v~~~~~s~~~~~l~s~~-----~dg~i~vw~~~~~~~~~~ 413 (419)
.+ .+...+..++|+|+|+.|+++. .|+.|.|||.+++++++.
T Consensus 465 ~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~ 520 (543)
T 1nir_A 465 VLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAV 520 (543)
T ss_dssp EECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEE
T ss_pred EeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEe
Confidence 43 3577899999999999887652 479999999999988654
No 109
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-37 Score=272.65 Aligned_cols=262 Identities=11% Similarity=0.061 Sum_probs=209.2
Q ss_pred cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeE
Q 014755 46 CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTAC 125 (419)
Q Consensus 46 ~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~ 125 (419)
-...|.+++|||||+++|+++.| ++|+ |...++ .+.+|...|.+++|+|+| .++ .+.+|+.+....
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D-~TV~--d~~~~~---~l~gh~~~v~~V~FsPdg-------~~~-~~~~~~~~~~~~ 79 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPD-ISIG--QPKYAK---DINCNSKNLFHVKEFPLE-------FEN-KLDFELAQQNGL 79 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSS-EEEE--EECCCS---CCSSBGGGTEEEEEECCC-------CCC-TTTTSCCCSSCS
T ss_pred hhccEEEEEECCCCCEEEEEcCC-ceee--cccccc---eecCCCccEEEEEECCCC-------Ccc-eEEEEeCCCceE
Confidence 45789999999999999999976 8999 755554 447899999999999999 344 555555443332
Q ss_pred EEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEecccc-----ceeeeeECCCCCeEEEEcCCCC
Q 014755 126 VHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTL-----DLADIEWSPDDSAIVIWDSPLE 200 (419)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~~~~ 200 (419)
..+ .+...|.+++|+|+|++||+++.+ |.|++||... .+..+. |.. .+.+++|+|||++|++ ++.|
T Consensus 80 ~~~-~~~~~V~~vawSPdG~~LAs~s~d---g~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAs--gs~D 150 (588)
T 2j04_A 80 LNS-QPVCYPRVCKPSPIDDWMAVLSNN---GNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVV--GNED 150 (588)
T ss_dssp STT-SCSCCEEEEEECSSSSCEEEEETT---SCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEE--EETT
T ss_pred eec-CCCCcEEEEEECCCCCEEEEEeCC---CcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEE--EcCC
Confidence 212 447789999999999999999987 8999999654 555566 554 4999999999999999 6779
Q ss_pred ceEEEEcC-CCc-------eEEEEeec--CCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceee---eeeccccccc
Q 014755 201 YKVLIYSP-DGR-------CLLKYQAY--ESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTF---AEFMHLSTVR 267 (419)
Q Consensus 201 ~~i~~~d~-~~~-------~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~---~~~~~~~~~~ 267 (419)
|+|++||+ .+. .+..+..+ .|...|.+++|+|+| +++++.|++|++||+.+++.. .++.
T Consensus 151 GtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~------ 222 (588)
T 2j04_A 151 GELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQ------ 222 (588)
T ss_dssp SEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEE------
T ss_pred CEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeec------
Confidence 99999999 443 24565321 233489999999999 888899999999999876632 1221
Q ss_pred CCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeE
Q 014755 268 GPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQY 347 (419)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 347 (419)
.+|...|.+++|+ |++
T Consensus 223 --------------------------------------------------------------~~h~~~V~svaFs--g~~ 238 (588)
T 2j04_A 223 --------------------------------------------------------------NASRRKITDLKIV--DYK 238 (588)
T ss_dssp --------------------------------------------------------------CCCSSCCCCEEEE--TTE
T ss_pred --------------------------------------------------------------ccccCcEEEEEEE--CCE
Confidence 1366678999999 688
Q ss_pred EEEecCCCCceEEEeeccCCCce-eecccCCCeeEEEe--CCCCCeEEEEeCCCcEEEeecC
Q 014755 348 ICTRNDSMPTTLWIWDICRQEPA-AILVQKDPIRAATW--DPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 348 l~~~~~d~~~~i~iwd~~~~~~~-~~~~~~~~v~~~~~--s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
||+++ + ++|++||+.+++.. ...+|...|+.++| +||++.|+++++||+ ++|...
T Consensus 239 LASa~-~--~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 239 VVLTC-P--GYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EEEEC-S--SEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred EEEEe-C--CeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 88887 5 99999999998884 44489999999999 999999999999999 999986
No 110
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.8e-35 Score=263.19 Aligned_cols=236 Identities=11% Similarity=0.040 Sum_probs=200.0
Q ss_pred cCeEEcCCCCEEEEEeCCeEEEEecCCCc---EEEEee------------------------------------------
Q 014755 11 GPSCFSPNARYIAVAVDYRLVVRDAHSFK---VVQLFS------------------------------------------ 45 (419)
Q Consensus 11 ~~~~~s~d~~~la~~~~~~i~i~~~~~~~---~~~~~~------------------------------------------ 45 (419)
..++|+|||++|+++.++.|++||+.+++ .+..+.
T Consensus 8 ~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (450)
T 2vdu_B 8 QNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSIKRT 87 (450)
T ss_dssp CEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC---------------------------------------
T ss_pred EEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcccccc
Confidence 45889999999988889999999999998 544333
Q ss_pred -------------cCcceeEEEEecCCCeE-EEEeccCCeEEEEEcc--CCcceeeee--cCCccEeEEEECCCCCEEEE
Q 014755 46 -------------CLDKISYIEWALDSEYI-LCGLYKRLMIQAWSLT--QPEWTCKID--EGLAGIAYARWSPDSRHILT 107 (419)
Q Consensus 46 -------------~~~~v~~~~~s~~~~~l-~~~~~~~g~i~iw~~~--~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~ 107 (419)
|.+.|.+++|+|++++| ++++.| |.|++||+. +++.+..+. .+...|.+++|+|++++|++
T Consensus 88 ~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~d-g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~ 166 (450)
T 2vdu_B 88 AAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSD-KSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVII 166 (450)
T ss_dssp ------------CCCCCEEEEEECTTSSEEEEEEGGG-TEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEE
T ss_pred CccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCC-CeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEE
Confidence 22269999999999997 677666 899999999 888877776 56688999999999999999
Q ss_pred EecCCCeEEEEEcCCCeEE-----EeccCCCCeeeEEEccC---CCEEEEEeecCCCCeEEEEeccCCeEEEE-Eecccc
Q 014755 108 TSDFQLRLTVWSLLNTACV-----HVQSPKHASKGVAFTQD---GKFAAICTRRDCKDYINLLSCHTWEIMGV-FAVDTL 178 (419)
Q Consensus 108 ~~~~~~~i~iwd~~~~~~~-----~~~~~~~~~~~~~~~~~---~~~l~~~~~~~~~g~v~i~d~~~~~~~~~-~~~~~~ 178 (419)
++.++ .+++|++.+++.. .+..|...+.+++|+|+ +++|++++.| +.|++||+++++.+.. +.+|..
T Consensus 167 ~~~~g-~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d---~~i~vwd~~~~~~~~~~~~~h~~ 242 (450)
T 2vdu_B 167 ADKFG-DVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD---EHIKISHYPQCFIVDKWLFGHKH 242 (450)
T ss_dssp EETTS-EEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT---SCEEEEEESCTTCEEEECCCCSS
T ss_pred EeCCC-cEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC---CcEEEEECCCCceeeeeecCCCC
Confidence 99877 9999999876543 35678889999999999 9999999987 8999999999887777 558899
Q ss_pred ceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeec-----------------------CCCCceeEEEEccCC
Q 014755 179 DLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAY-----------------------ESGLGVKSISWSPCG 234 (419)
Q Consensus 179 ~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~-----------------------~~~~~v~~~~~s~~~ 234 (419)
.|.+++|+ +++++++ ++.|+.|++||+ +++.+..+..+ .....+.+++|+|++
T Consensus 243 ~v~~~~~s-d~~~l~s--~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 319 (450)
T 2vdu_B 243 FVSSICCG-KDYLLLS--AGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNL 319 (450)
T ss_dssp CEEEEEEC-STTEEEE--EESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSS
T ss_pred ceEEEEEC-CCCEEEE--EeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCC
Confidence 99999999 9999998 567999999999 88888877632 112368999999999
Q ss_pred CeEEEEE-ecCcEEEEEc--CCc
Q 014755 235 QFLAVGS-YDQTLRVLNH--LTW 254 (419)
Q Consensus 235 ~~l~~~~-~d~~i~v~d~--~~~ 254 (419)
++|++++ .++.|++|++ .++
T Consensus 320 ~~l~~~~~~d~~i~iw~~~~~~~ 342 (450)
T 2vdu_B 320 PFVAFFVEATKCIIILEMSEKQK 342 (450)
T ss_dssp SEEEEEETTCSEEEEEEECSSST
T ss_pred CEEEEEECCCCeEEEEEeccCCC
Confidence 9999999 8999999999 444
No 111
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-35 Score=260.30 Aligned_cols=249 Identities=10% Similarity=0.128 Sum_probs=207.4
Q ss_pred EeecCcceeEEEEecCCCeEEEEeccCCeEEEEEcc--CCcceeeeecCCccEeEEEECCC--CCEEEEEecCCCeEEEE
Q 014755 43 LFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLT--QPEWTCKIDEGLAGIAYARWSPD--SRHILTTSDFQLRLTVW 118 (419)
Q Consensus 43 ~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~~i~iw 118 (419)
..+|.+.|.+++|+|++++|++++.| |.|++||+. +++....+..|...|.+++|+++ +++|++++.|+ .|++|
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d-g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg-~v~iw 84 (379)
T 3jrp_A 7 ANAHNELIHDAVLDYYGKRLATCSSD-KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG-KVLIW 84 (379)
T ss_dssp EEECCCCEEEEEECSSSSEEEEEETT-SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS-CEEEE
T ss_pred ecCCcccEEEEEEcCCCCEEEEEECC-CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCC-EEEEE
Confidence 34599999999999999999999976 899999998 55667778899999999999987 99999999987 99999
Q ss_pred EcCCCe--EEE-eccCCCCeeeEEEccC--CCEEEEEeecCCCCeEEEEeccCCe--EEEEEeccccceeeeeECC----
Q 014755 119 SLLNTA--CVH-VQSPKHASKGVAFTQD--GKFAAICTRRDCKDYINLLSCHTWE--IMGVFAVDTLDLADIEWSP---- 187 (419)
Q Consensus 119 d~~~~~--~~~-~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~g~v~i~d~~~~~--~~~~~~~~~~~v~~~~~~~---- 187 (419)
|+.+++ ... +..+...+.+++|+|+ +.++++++.+ +.|++||+++.. ....+..|...+.+++|+|
T Consensus 85 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 161 (379)
T 3jrp_A 85 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD---GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIE 161 (379)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT---SEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC--
T ss_pred EcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCC---CcEEEEecCCCCceeeEEecCCCCceEEEEEcCcccc
Confidence 999986 333 6778899999999999 9999999987 899999998863 3445677889999999999
Q ss_pred ---------CCCeEEEEcCCCCceEEEEcC-CCc----eEEEEeecCCCCceeEEEEccC---CCeEEEEEecCcEEEEE
Q 014755 188 ---------DDSAIVIWDSPLEYKVLIYSP-DGR----CLLKYQAYESGLGVKSISWSPC---GQFLAVGSYDQTLRVLN 250 (419)
Q Consensus 188 ---------~~~~l~~~~~~~~~~i~~~d~-~~~----~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~d~~i~v~d 250 (419)
++..+++ ++.++.|++||+ .+. ....+..|.. .|.+++|+|+ +++|++++.||.|++||
T Consensus 162 ~~~~~~~~~~~~~l~~--~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~--~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd 237 (379)
T 3jrp_A 162 EDGEHNGTKESRKFVT--GGADNLVKIWKYNSDAQTYVLESTLEGHSD--WVRDVAWSPTVLLRSYLASVSQDRTCIIWT 237 (379)
T ss_dssp --------CTTCEEEE--EETTSCEEEEEEETTTTEEEEEEEECCCSS--CEEEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred ccccccCCCCCCEEEE--EeCCCeEEEEEecCCCcceeeEEEEecccC--cEeEEEECCCCCCCCeEEEEeCCCEEEEEe
Confidence 6888888 667999999999 443 3344444444 8999999999 89999999999999999
Q ss_pred cCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCC
Q 014755 251 HLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKP 330 (419)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (419)
+.+++....... ....
T Consensus 238 ~~~~~~~~~~~~----------------------------------------------------------------~~~~ 253 (379)
T 3jrp_A 238 QDNEQGPWKKTL----------------------------------------------------------------LKEE 253 (379)
T ss_dssp ESSTTSCCEEEE----------------------------------------------------------------SSSS
T ss_pred CCCCCccceeee----------------------------------------------------------------eccc
Confidence 987542111100 0011
Q ss_pred CCCcceEEEEEccCCeEEEEecCCCCceEEEeeccC
Q 014755 331 NPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICR 366 (419)
Q Consensus 331 ~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~ 366 (419)
.|...|.+++|+|+|++|++++.| |.|++|++..
T Consensus 254 ~~~~~v~~~~~s~~g~~l~~~~~d--g~i~iw~~~~ 287 (379)
T 3jrp_A 254 KFPDVLWRASWSLSGNVLALSGGD--NKVTLWKENL 287 (379)
T ss_dssp CCSSCEEEEEECSSSCCEEEEESS--SSEEEEEEEE
T ss_pred cCCCcEEEEEEcCCCCEEEEecCC--CcEEEEeCCC
Confidence 367779999999999999999998 9999999884
No 112
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=6.6e-34 Score=253.06 Aligned_cols=270 Identities=12% Similarity=0.104 Sum_probs=221.0
Q ss_pred eEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEe-cCCCeEEEEEcCCCeEEEeccCCCCeeeEE
Q 014755 61 YILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTS-DFQLRLTVWSLLNTACVHVQSPKHASKGVA 139 (419)
Q Consensus 61 ~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~ 139 (419)
.+++++.+ +.|++||+.+++....+..|. .+.+++|+|+++++++++ .++ .|++||+.+++..........+.+++
T Consensus 4 l~vs~~~d-~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~-~i~v~d~~~~~~~~~~~~~~~v~~~~ 80 (391)
T 1l0q_A 4 AYIANSES-DNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSN-DVSIIDTATNNVIATVPAGSSPQGVA 80 (391)
T ss_dssp EEEEETTT-TEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGT-EEEEEETTTTEEEEEEECSSSEEEEE
T ss_pred EEEEcCCC-CEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCC-eEEEEECCCCeEEEEEECCCCccceE
Confidence 45555544 899999999998887776654 589999999999885554 565 99999999999888444455899999
Q ss_pred EccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEee
Q 014755 140 FTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQA 218 (419)
Q Consensus 140 ~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~ 218 (419)
|+|+++++++++.+ ++.|++||+.+++.+..+..+ ..+.+++|+|+++.+++. ...++.|++||+ +++.+..+..
T Consensus 81 ~spdg~~l~~~~~~--~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~-~~~~~~v~~~d~~~~~~~~~~~~ 156 (391)
T 1l0q_A 81 VSPDGKQVYVTNMA--SSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVT-NNGDKTVSVINTVTKAVINTVSV 156 (391)
T ss_dssp ECTTSSEEEEEETT--TTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEE-ETTTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCCCEEEEEECC--CCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEE-eCCCCEEEEEECCCCcEEEEEec
Confidence 99999988776643 379999999999988877754 568999999999988543 456899999999 7777777765
Q ss_pred cCCCCceeEEEEccCCCeE-EEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCcccc
Q 014755 219 YESGLGVKSISWSPCGQFL-AVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQ 297 (419)
Q Consensus 219 ~~~~~~v~~~~~s~~~~~l-~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (419)
+. .+.+++|+|+++++ ++++.++.|++||+.+++.+..+.
T Consensus 157 ~~---~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~------------------------------------ 197 (391)
T 1l0q_A 157 GR---SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK------------------------------------ 197 (391)
T ss_dssp CS---SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE------------------------------------
T ss_pred CC---CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe------------------------------------
Confidence 44 57999999999887 566778999999999887766553
Q ss_pred ccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEec---CCCCceEEEeeccCCCceeecc
Q 014755 298 GNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRN---DSMPTTLWIWDICRQEPAAILV 374 (419)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~---~d~~~~i~iwd~~~~~~~~~~~ 374 (419)
+...+.+++|+|+|++|++++ .+ +.|++||+.++++...+.
T Consensus 198 ----------------------------------~~~~~~~~~~~~~g~~l~~~~~~~~~--~~v~~~d~~~~~~~~~~~ 241 (391)
T 1l0q_A 198 ----------------------------------VEAAPSGIAVNPEGTKAYVTNVDKYF--NTVSMIDTGTNKITARIP 241 (391)
T ss_dssp ----------------------------------CSSEEEEEEECTTSSEEEEEEECSSC--CEEEEEETTTTEEEEEEE
T ss_pred ----------------------------------cCCCccceEECCCCCEEEEEecCcCC--CcEEEEECCCCeEEEEEe
Confidence 233478899999999998887 56 999999999998887776
Q ss_pred cCCCeeEEEeCCCCCeE-EEEeCCCcEEEeecCCCeEEe
Q 014755 375 QKDPIRAATWDPTCTRL-VLCTGSSHLYMWTPSGAYCVS 412 (419)
Q Consensus 375 ~~~~v~~~~~s~~~~~l-~s~~~dg~i~vw~~~~~~~~~ 412 (419)
....+.+++|+|++++| ++++.|+.|++||+.++++++
T Consensus 242 ~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~ 280 (391)
T 1l0q_A 242 VGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITA 280 (391)
T ss_dssp CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred cCCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEE
Confidence 55678999999999977 677889999999999887654
No 113
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.2e-35 Score=264.70 Aligned_cols=306 Identities=11% Similarity=0.073 Sum_probs=227.5
Q ss_pred cceeEEEEecCCCeEEEEeccCCeEEEEEccCCc---ceeeeec------------------------------------
Q 014755 48 DKISYIEWALDSEYILCGLYKRLMIQAWSLTQPE---WTCKIDE------------------------------------ 88 (419)
Q Consensus 48 ~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~---~~~~~~~------------------------------------ 88 (419)
.++.+++|+|+|++|+++. + +.|++||+.+++ .+..+..
T Consensus 5 ~p~~~v~~s~dg~~l~~~~-~-~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAII-K-NCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp CCCCEEEECSSSSEEEEEE-T-TEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred ccEEEEEecCCCCEEEEEe-C-CeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 5789999999999777765 4 699999999998 5444432
Q ss_pred ------------------CCccEeEEEECCCCCEE-EEEecCCCeEEEEEcC--CCeEEE-ec--cCCCCeeeEEEccCC
Q 014755 89 ------------------GLAGIAYARWSPDSRHI-LTTSDFQLRLTVWSLL--NTACVH-VQ--SPKHASKGVAFTQDG 144 (419)
Q Consensus 89 ------------------~~~~v~~~~~~~~~~~l-~~~~~~~~~i~iwd~~--~~~~~~-~~--~~~~~~~~~~~~~~~ 144 (419)
|...|.+++|+|++++| ++++.++ .|++||+. +++... +. .+...+.+++|+|++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg-~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 161 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDK-SLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDD 161 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGT-EEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCC-eEEEEECcCCCCceeeeeecccCCCCceEEEEcCCC
Confidence 22369999999999997 6777776 99999999 776666 33 567889999999999
Q ss_pred CEEEEEeecCCCCeEEEEeccCCeEEE----EEeccccceeeeeECCC---CCeEEEEcCCCCceEEEEcC-CCceEEEE
Q 014755 145 KFAAICTRRDCKDYINLLSCHTWEIMG----VFAVDTLDLADIEWSPD---DSAIVIWDSPLEYKVLIYSP-DGRCLLKY 216 (419)
Q Consensus 145 ~~l~~~~~~~~~g~v~i~d~~~~~~~~----~~~~~~~~v~~~~~~~~---~~~l~~~~~~~~~~i~~~d~-~~~~~~~~ 216 (419)
++|++++.+ |.|++|++.+++... .+..|...|.+++|+|+ ++++++ ++.|+.|++||+ +++.+..+
T Consensus 162 ~~l~~~~~~---g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s--~~~d~~i~vwd~~~~~~~~~~ 236 (450)
T 2vdu_B 162 TTVIIADKF---GDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIIT--SDRDEHIKISHYPQCFIVDKW 236 (450)
T ss_dssp SEEEEEETT---SEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEE--EETTSCEEEEEESCTTCEEEE
T ss_pred CEEEEEeCC---CcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEE--EcCCCcEEEEECCCCceeeee
Confidence 999999876 899999998876554 67788999999999999 888888 566899999999 77777663
Q ss_pred -eecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCcc
Q 014755 217 -QAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDF 295 (419)
Q Consensus 217 -~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (419)
..|.. .|.+++|+ ++++|++++.|+.|++||+.+++++..+.....+.. +.+.....+..
T Consensus 237 ~~~h~~--~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~------------ 297 (450)
T 2vdu_B 237 LFGHKH--FVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKP----YLNDQHLAPPR------------ 297 (450)
T ss_dssp CCCCSS--CEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGG----GCCTTSBC---------------
T ss_pred ecCCCC--ceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhh----hhhhccccccc------------
Confidence 34544 89999999 999999999999999999999998887762221110 00000000000
Q ss_pred ccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEec-CCCCceEEEeec--cCC---Cc
Q 014755 296 IQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRN-DSMPTTLWIWDI--CRQ---EP 369 (419)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-~d~~~~i~iwd~--~~~---~~ 369 (419)
+. ..........|..++|+|++++|++++ .+ +.|+||++ .++ +.
T Consensus 298 ---------------~~-------------~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d--~~i~iw~~~~~~~~~l~~ 347 (450)
T 2vdu_B 298 ---------------FQ-------------NENNDIIEFAVSKIIKSKNLPFVAFFVEAT--KCIIILEMSEKQKGDLAL 347 (450)
T ss_dssp -----------------------------------CBCCCEEEEEECSSSSEEEEEETTC--SEEEEEEECSSSTTCEEE
T ss_pred ---------------cc-------------ccccccceEEEEEEEEeCCCCEEEEEECCC--CeEEEEEeccCCCCceee
Confidence 00 000001344589999999999999998 67 99999999 555 34
Q ss_pred eeecccCCCeeEEEeCCCCCeEEEEeC------CCcEEEeecC--CCeE
Q 014755 370 AAILVQKDPIRAATWDPTCTRLVLCTG------SSHLYMWTPS--GAYC 410 (419)
Q Consensus 370 ~~~~~~~~~v~~~~~s~~~~~l~s~~~------dg~i~vw~~~--~~~~ 410 (419)
+..+.....|.+++|+|++.+++.++. +..|.+|.+. +++.
T Consensus 348 ~~~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~ 396 (450)
T 2vdu_B 348 KQIITFPYNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNENSF 396 (450)
T ss_dssp EEEEECSSCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTTEE
T ss_pred ccEeccCCceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCCeE
Confidence 444442389999999996544444343 4558888765 4454
No 114
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4.5e-35 Score=256.34 Aligned_cols=287 Identities=11% Similarity=0.162 Sum_probs=205.3
Q ss_pred cccccC---eEEcCCCCEEEEEe-CCeEEEEecCCCc----EEEE-eecCcceeEEEEec--CCCeEEEEeccCCeEEEE
Q 014755 7 YKQTGP---SCFSPNARYIAVAV-DYRLVVRDAHSFK----VVQL-FSCLDKISYIEWAL--DSEYILCGLYKRLMIQAW 75 (419)
Q Consensus 7 ~~~~~~---~~~s~d~~~la~~~-~~~i~i~~~~~~~----~~~~-~~~~~~v~~~~~s~--~~~~l~~~~~~~g~i~iw 75 (419)
.+|... ++|+|++++||+++ |+.|++||+.++. .... ..|...|.+++|+| ++++|++++.| |.|++|
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d-g~v~vw 86 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD-KTVKLW 86 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT-SCEEEE
T ss_pred cccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC-CeEEEE
Confidence 466655 89999999999998 8899999998763 3333 35999999999999 69999999977 899999
Q ss_pred EccCC---------cceeeeecCCccEeEEEECCC--CCEEEEEecCCCeEEEEEcCCCeEEE-e-------------cc
Q 014755 76 SLTQP---------EWTCKIDEGLAGIAYARWSPD--SRHILTTSDFQLRLTVWSLLNTACVH-V-------------QS 130 (419)
Q Consensus 76 ~~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~~i~iwd~~~~~~~~-~-------------~~ 130 (419)
|+.++ +....+..|...|.+++|+|+ ++++++++.++ .|++||+++++... + ..
T Consensus 87 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDG-ILRLYDALEPSDLRSWTLTSEMKVLSIPPAN 165 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTC-EEEEEECSSTTCTTCCEEEEEEESCSCCCSS
T ss_pred ecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCC-cEEEecCCChHHhccccccccccccccccCC
Confidence 99887 446677889999999999999 99999999988 99999998765322 1 14
Q ss_pred CCCCeeeEEEccC---CCEEEEEeecCCCCeEEEEeccCCeE--EEEEeccccceeeeeECCCC----CeEEEEcCCCCc
Q 014755 131 PKHASKGVAFTQD---GKFAAICTRRDCKDYINLLSCHTWEI--MGVFAVDTLDLADIEWSPDD----SAIVIWDSPLEY 201 (419)
Q Consensus 131 ~~~~~~~~~~~~~---~~~l~~~~~~~~~g~v~i~d~~~~~~--~~~~~~~~~~v~~~~~~~~~----~~l~~~~~~~~~ 201 (419)
+...+.+++|+|+ +.++++++.+ +.+.+|+...++. +..+..|...|.+++|+|++ +++++ ++.|+
T Consensus 166 ~~~~~~~~~~~p~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s--~~~dg 240 (351)
T 3f3f_A 166 HLQSDFCLSWCPSRFSPEKLAVSALE---QAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIAT--GCKDG 240 (351)
T ss_dssp CSCCCEEEEECCCSSSCCEEEEEETT---EEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEE--EETTS
T ss_pred cccceeEEEeccCCCCCcEEEEecCC---CcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEE--EcCCC
Confidence 5667899999997 8899999886 7888887777664 66777899999999999998 67777 66799
Q ss_pred eEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEec----CcEEEEEcCCceeeeeecccccccCCCccceec
Q 014755 202 KVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYD----QTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFK 276 (419)
Q Consensus 202 ~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (419)
.|++||+ .+........... .......++....++.+..+ ..+.+|+....+.+..+
T Consensus 241 ~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 302 (351)
T 3f3f_A 241 RIRIFKITEKLSPLASEESLT--NSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEH---------------- 302 (351)
T ss_dssp CEEEEEEEECC-----------------------------------------CCSEEEEEEEEE----------------
T ss_pred eEEEEeCCCCcCccccCCccc--ceeccCCCcccccccccccccccceeeeecccccccEEEEE----------------
Confidence 9999999 4433332222111 33344444444444444322 33444443333333332
Q ss_pred cCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCC
Q 014755 277 EVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMP 356 (419)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~ 356 (419)
.+|...|++++|+|++++|++++.|
T Consensus 303 -----------------------------------------------------~~h~~~v~~~~~s~~~~~l~s~~~d-- 327 (351)
T 3f3f_A 303 -----------------------------------------------------DDHNGEVWSVSWNLTGTILSSAGDD-- 327 (351)
T ss_dssp -----------------------------------------------------CTTSSCEEEEEECSSSCCEEEEETT--
T ss_pred -----------------------------------------------------ecccccEEEEEEcCCCCEEEEecCC--
Confidence 2577889999999999999999999
Q ss_pred ceEEEeeccCCCceeec
Q 014755 357 TTLWIWDICRQEPAAIL 373 (419)
Q Consensus 357 ~~i~iwd~~~~~~~~~~ 373 (419)
|.|+||++.+++....+
T Consensus 328 g~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 328 GKVRLWKATYSNEFKCM 344 (351)
T ss_dssp SCEEEEEECTTSCEEEE
T ss_pred CcEEEEecCcCcchhhe
Confidence 99999999987655443
No 115
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.1e-34 Score=252.93 Aligned_cols=278 Identities=11% Similarity=0.094 Sum_probs=216.1
Q ss_pred cccccC---eEEcCC---CCEEEEEe-CCeEEEEecCC-CcEE-E-EeecCcceeEEEEecCCCeEEEEeccCCeEEEEE
Q 014755 7 YKQTGP---SCFSPN---ARYIAVAV-DYRLVVRDAHS-FKVV-Q-LFSCLDKISYIEWALDSEYILCGLYKRLMIQAWS 76 (419)
Q Consensus 7 ~~~~~~---~~~s~d---~~~la~~~-~~~i~i~~~~~-~~~~-~-~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~ 76 (419)
.+|... ++|+|+ |++|++++ ++.|++||+.+ ++.. . ...|...|.+++|+|++++|++++.| |.|++||
T Consensus 36 ~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-g~v~iwd 114 (368)
T 3mmy_A 36 SSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD-KTAKMWD 114 (368)
T ss_dssp SCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT-SEEEEEE
T ss_pred cCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC-CcEEEEE
Confidence 345544 899999 69999998 88999999997 5554 3 44599999999999999999999977 8999999
Q ss_pred ccCCcceeeeecCCccEeEEEE--CCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecC
Q 014755 77 LTQPEWTCKIDEGLAGIAYARW--SPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRD 154 (419)
Q Consensus 77 ~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 154 (419)
+.+++... +..|...|.+++| +|++++|++++.++ .|++||+++++..........+.++.+. ...+++++.+
T Consensus 115 ~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg-~i~vwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~- 189 (368)
T 3mmy_A 115 LSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDK-TLKFWDTRSSNPMMVLQLPERCYCADVI--YPMAVVATAE- 189 (368)
T ss_dssp TTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTS-EEEEECSSCSSCSEEEECSSCEEEEEEE--TTEEEEEEGG-
T ss_pred cCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCC-cEEEEECCCCcEEEEEecCCCceEEEec--CCeeEEEeCC-
Confidence 99988664 5679999999999 99999999999988 9999999998776633334455555555 4577777776
Q ss_pred CCCeEEEEeccCCeEEEEEe--ccccceeeeeECCCCCe----EEEEcCCCCceEEEEcC-CC---ceEEEEeecCCC--
Q 014755 155 CKDYINLLSCHTWEIMGVFA--VDTLDLADIEWSPDDSA----IVIWDSPLEYKVLIYSP-DG---RCLLKYQAYESG-- 222 (419)
Q Consensus 155 ~~g~v~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~----l~~~~~~~~~~i~~~d~-~~---~~~~~~~~~~~~-- 222 (419)
+.+.+|+++......... .......++.+.++... +++ ++.++.|++|++ .. ..+..+..+...
T Consensus 190 --~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~ 265 (368)
T 3mmy_A 190 --RGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFAL--GSIEGRVAIHYINPPNPAKDNFTFKCHRSNGT 265 (368)
T ss_dssp --GCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEE--EETTSEEEEEESSCSCHHHHSEEEECSEEC--
T ss_pred --CcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEE--ecCCCcEEEEecCCCCccccceeeeeeecccc
Confidence 799999998764433222 22344555555555443 666 677999999999 43 455566554421
Q ss_pred --------CceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCc
Q 014755 223 --------LGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDD 294 (419)
Q Consensus 223 --------~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (419)
..|.+++|+|++++|++++.||.|++||+.+++++..+.
T Consensus 266 ~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--------------------------------- 312 (368)
T 3mmy_A 266 NTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSE--------------------------------- 312 (368)
T ss_dssp --CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECC---------------------------------
T ss_pred cccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEec---------------------------------
Confidence 159999999999999999999999999999988877653
Q ss_pred cccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeecc
Q 014755 295 FIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDIC 365 (419)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~ 365 (419)
.|...|.+++|+|+|++|++++.| +..+.|++.
T Consensus 313 ------------------------------------~~~~~v~~~~~s~~g~~l~~~s~d--~~~~~~~~~ 345 (368)
T 3mmy_A 313 ------------------------------------QLDQPISACCFNHNGNIFAYASSY--DWSKGHEFY 345 (368)
T ss_dssp ------------------------------------CCSSCEEEEEECTTSSCEEEEECC--CSTTCGGGC
T ss_pred ------------------------------------CCCCCceEEEECCCCCeEEEEecc--ccccccccc
Confidence 367779999999999999999987 655555443
No 116
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=5.2e-33 Score=250.75 Aligned_cols=277 Identities=13% Similarity=0.099 Sum_probs=227.3
Q ss_pred CeEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEe------ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCccee
Q 014755 12 PSCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLF------SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTC 84 (419)
Q Consensus 12 ~~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~------~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~ 84 (419)
.++|+|+++++++++ ++.|++||+.+++..... .|.+.|.+++|+|+++++++++.+ +.|++||+++++...
T Consensus 127 ~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d-~~v~~~d~~~~~~~~ 205 (433)
T 3bws_A 127 SVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA-NAVHVFDLKTLAYKA 205 (433)
T ss_dssp CCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG-TEEEEEETTTCCEEE
T ss_pred EEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC-CEEEEEECCCceEEE
Confidence 489999776666666 667999999999988743 367799999999999999999876 899999999999888
Q ss_pred eeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecC-----CCCeE
Q 014755 85 KIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRD-----CKDYI 159 (419)
Q Consensus 85 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~g~v 159 (419)
.+..|...+.+++|+|+++.+++++..++.|++||+++++..........+.+++|+|+++++++++.+. .++.|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i 285 (433)
T 3bws_A 206 TVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRL 285 (433)
T ss_dssp EEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEE
T ss_pred EEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeE
Confidence 8888888999999999999997776434499999999998887545556689999999999999888532 13799
Q ss_pred EEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEE
Q 014755 160 NLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLA 238 (419)
Q Consensus 160 ~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 238 (419)
++||+++++.+..+ .+...+.+++|+|+++.+++. ...++.|++||+ +++.+..+.. .. .+.+++|+|+|++++
T Consensus 286 ~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~-~~~~~~v~v~d~~~~~~~~~~~~-~~--~~~~~~~s~dg~~l~ 360 (433)
T 3bws_A 286 GIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVS-DMCCSKIEVYDLKEKKVQKSIPV-FD--KPNTIALSPDGKYLY 360 (433)
T ss_dssp EEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEE-ETTTTEEEEEETTTTEEEEEEEC-SS--SEEEEEECTTSSEEE
T ss_pred EEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEE-ecCCCEEEEEECCCCcEEEEecC-CC--CCCeEEEcCCCCEEE
Confidence 99999998877665 345578899999999877664 356899999999 6777666653 22 699999999999998
Q ss_pred EEEe---------------cCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCcccccccccc
Q 014755 239 VGSY---------------DQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDAT 303 (419)
Q Consensus 239 ~~~~---------------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (419)
+++. ||.|++||+.+++.+..+..
T Consensus 361 ~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~----------------------------------------- 399 (433)
T 3bws_A 361 VSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA----------------------------------------- 399 (433)
T ss_dssp EEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-----------------------------------------
T ss_pred EEecCCCccccccccccccceEEEEEECCCCcEEEEecC-----------------------------------------
Confidence 8876 46999999999887776541
Q ss_pred CCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecC-CCCceEEEeeccC
Q 014755 304 NGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRND-SMPTTLWIWDICR 366 (419)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-d~~~~i~iwd~~~ 366 (419)
...+.+++|+|+|++|++++. | +.|++|+++.
T Consensus 400 -----------------------------~~~~~~~~~s~dg~~l~~~~~~d--~~i~v~~~~~ 432 (433)
T 3bws_A 400 -----------------------------GNQPTGLDVSPDNRYLVISDFLD--HQIRVYRRDG 432 (433)
T ss_dssp -----------------------------SSSEEEEEECTTSCEEEEEETTT--TEEEEEEETT
T ss_pred -----------------------------CCCCceEEEcCCCCEEEEEECCC--CeEEEEEecC
Confidence 224789999999999988765 7 9999999863
No 117
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=9.2e-34 Score=254.77 Aligned_cols=246 Identities=16% Similarity=0.269 Sum_probs=199.9
Q ss_pred eeeecCCccEeEEEECCC-CCEEEEEecCCCeEEEEEcCC----------CeEEE-eccCCCCeeeEEEccCCC-EEEEE
Q 014755 84 CKIDEGLAGIAYARWSPD-SRHILTTSDFQLRLTVWSLLN----------TACVH-VQSPKHASKGVAFTQDGK-FAAIC 150 (419)
Q Consensus 84 ~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~~i~iwd~~~----------~~~~~-~~~~~~~~~~~~~~~~~~-~l~~~ 150 (419)
.....|.+.|.+++|+|+ +.+|++++.++ .|++||+.. .+... +..|...+.+++|+|++. +|+++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg-~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSS-DVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSS-CEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCC-cEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence 345678899999999997 66777877776 999999986 33333 778899999999999998 88888
Q ss_pred eecCCCCeEEEEeccCCeE-------EEEEeccccceeeeeECC-CCCeEEEEcCCCCceEEEEcC-CC---ceEEEEee
Q 014755 151 TRRDCKDYINLLSCHTWEI-------MGVFAVDTLDLADIEWSP-DDSAIVIWDSPLEYKVLIYSP-DG---RCLLKYQA 218 (419)
Q Consensus 151 ~~~~~~g~v~i~d~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~i~~~d~-~~---~~~~~~~~ 218 (419)
+.+ |.|++||+.++.. ...+..|...|.+++|+| ++..+++ ++.++.|++||+ ++ +.+..+..
T Consensus 201 ~~d---g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s--~~~dg~i~i~d~~~~~~~~~~~~~~~ 275 (430)
T 2xyi_A 201 SDD---HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGS--VADDQKLMIWDTRNNNTSKPSHTVDA 275 (430)
T ss_dssp CTT---SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEE--EETTSEEEEEETTCSCSSSCSEEEEC
T ss_pred eCC---CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEE--EeCCCeEEEEECCCCCCCcceeEeec
Confidence 876 8999999987322 455667889999999999 5566666 566899999999 44 46667766
Q ss_pred cCCCCceeEEEEccCCC-eEEEEEecCcEEEEEcCCc-eeeeeecccccccCCCccceeccCCCcccccceeeeccCccc
Q 014755 219 YESGLGVKSISWSPCGQ-FLAVGSYDQTLRVLNHLTW-KTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFI 296 (419)
Q Consensus 219 ~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (419)
+.. .|++++|+|+++ ++++++.||.|++||+++. +++..+.
T Consensus 276 ~~~--~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~----------------------------------- 318 (430)
T 2xyi_A 276 HTA--EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE----------------------------------- 318 (430)
T ss_dssp CSS--CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE-----------------------------------
T ss_pred CCC--CeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEee-----------------------------------
Confidence 555 899999999987 6889999999999999863 3333322
Q ss_pred cccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCe-EEEEecCCCCceEEEeeccCC--------
Q 014755 297 QGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQ-YICTRNDSMPTTLWIWDICRQ-------- 367 (419)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~d~~~~i~iwd~~~~-------- 367 (419)
.|...|.+++|+|+++ +|++++.| +.|+|||+...
T Consensus 319 ----------------------------------~h~~~v~~i~~sp~~~~~l~s~~~d--~~i~iwd~~~~~~~~~~~~ 362 (430)
T 2xyi_A 319 ----------------------------------SHKDEIFQVQWSPHNETILASSGTD--RRLHVWDLSKIGEEQSTED 362 (430)
T ss_dssp ----------------------------------CCSSCEEEEEECSSCTTEEEEEETT--SCCEEEEGGGTTCCCCHHH
T ss_pred ----------------------------------cCCCCEEEEEECCCCCCEEEEEeCC--CcEEEEeCCCCccccCccc
Confidence 3777899999999995 68899988 99999999872
Q ss_pred ------Cceeec-ccCCCeeEEEeCCCCC-eEEEEeCCCcEEEeecCCC
Q 014755 368 ------EPAAIL-VQKDPIRAATWDPTCT-RLVLCTGSSHLYMWTPSGA 408 (419)
Q Consensus 368 ------~~~~~~-~~~~~v~~~~~s~~~~-~l~s~~~dg~i~vw~~~~~ 408 (419)
+++... +|...|++++|+|+++ +|++++.||.|++|++...
T Consensus 363 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 363 AEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp HHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred cccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 333333 5889999999999999 8999999999999999743
No 118
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-34 Score=250.22 Aligned_cols=267 Identities=11% Similarity=0.079 Sum_probs=193.6
Q ss_pred cCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEE---------EcCCCeEEE
Q 014755 57 LDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVW---------SLLNTACVH 127 (419)
Q Consensus 57 ~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iw---------d~~~~~~~~ 127 (419)
+++.+|++|+.| |+|++||+.+++.+..+. ...|.++.|+|+ +++++.|+ .|++| ++.+++.+.
T Consensus 46 ~d~~~l~sg~~D-g~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~-~i~~w~~~~~~~~~~~~~~~~~~ 118 (343)
T 3lrv_A 46 YDKWVCMCRCED-GALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCN-RLLLLYPGNQITILDSKTNKVLR 118 (343)
T ss_dssp EEEEEEEEEEET-TEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTT-EEEEEETTTEEEEEETTTCCEEE
T ss_pred CCCCEEEEECCC-CcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCC-eEEEEEccCceEEeecCCcceeE
Confidence 455556666654 566666666665554443 334555555555 55555555 66666 444555444
Q ss_pred --eccCCCCeeeEEEcc--CCCEEEEEeecCCCCeEEEEeccCCeEEEEEec-cccceeeeeECCCCCeEEEEcCCCCce
Q 014755 128 --VQSPKHASKGVAFTQ--DGKFAAICTRRDCKDYINLLSCHTWEIMGVFAV-DTLDLADIEWSPDDSAIVIWDSPLEYK 202 (419)
Q Consensus 128 --~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~ 202 (419)
...+...+.+++|+| +++++++++.| |.|++||+++++....... +...+.+++|+|++.++++ ++.|+.
T Consensus 119 ~~~~~~~~~v~~~~~~~~~~~~~l~s~s~d---g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~las--g~~dg~ 193 (343)
T 3lrv_A 119 EIEVDSANEIIYMYGHNEVNTEYFIWADNR---GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLAL--YSPDGI 193 (343)
T ss_dssp EEECCCSSCEEEEECCC---CCEEEEEETT---CCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEE--ECTTSC
T ss_pred EeecCCCCCEEEEEcCCCCCCCEEEEEeCC---CcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEE--EcCCCE
Confidence 335667899999999 99999999987 8999999999988766643 4557999999999999998 678999
Q ss_pred EEEEcC-CCceE-EEEee-cCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCC
Q 014755 203 VLIYSP-DGRCL-LKYQA-YESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVD 279 (419)
Q Consensus 203 i~~~d~-~~~~~-~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (419)
|++||+ +++.+ ..+.. |.. .|.+++|+|++++|++++ ++.|++||+++++.+..+...
T Consensus 194 i~iwd~~~~~~~~~~~~~~h~~--~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~---------------- 254 (343)
T 3lrv_A 194 LDVYNLSSPDQASSRFPVDEEA--KIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTY---------------- 254 (343)
T ss_dssp EEEEESSCTTSCCEECCCCTTS--CEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCC----------------
T ss_pred EEEEECCCCCCCccEEeccCCC--CEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeeccc----------------
Confidence 999999 77766 66666 544 899999999999999999 559999999987665544310
Q ss_pred CcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcce--EEEEEccCCeEEEEecC-CCC
Q 014755 280 EPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGI--GLMSWSSDSQYICTRND-SMP 356 (419)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~~s~~g~~l~~~~~-d~~ 356 (419)
..|...+ .+++|+|+|++|++++. |
T Consensus 255 --------------------------------------------------~~~~~~~~~~~~~~~~~g~~l~~~s~~d-- 282 (343)
T 3lrv_A 255 --------------------------------------------------TIPEFKTGTVTYDIDDSGKNMIAYSNES-- 282 (343)
T ss_dssp --------------------------------------------------BC-----CCEEEEECTTSSEEEEEETTT--
T ss_pred --------------------------------------------------ccccccccceEEEECCCCCEEEEecCCC--
Confidence 0011112 47999999999999887 7
Q ss_pred ceEEEeeccCCCceeecccCCCeeEEEeCC---CCCeEEEEeCCCcEEEeecCCCe
Q 014755 357 TTLWIWDICRQEPAAILVQKDPIRAATWDP---TCTRLVLCTGSSHLYMWTPSGAY 409 (419)
Q Consensus 357 ~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~s~~~dg~i~vw~~~~~~ 409 (419)
+.|+||++.+....... .++..++|++ +.+.|++++.||.+.++-.....
T Consensus 283 ~~i~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~ 335 (343)
T 3lrv_A 283 NSLTIYKFDKKTKNWTK---DEESALCLQSDTADFTDMDVVCGDGGIAAILKTNDS 335 (343)
T ss_dssp TEEEEEEECTTTCSEEE---EEEEECCC----CCCCEEEEEEETTEEEEEEECSSE
T ss_pred CcEEEEEEcccccceEe---cCceeEecCccccccceeEEEecCCceEEEEecCCe
Confidence 99999999765433222 6678899998 88899999999999988765443
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=3.7e-33 Score=244.08 Aligned_cols=228 Identities=12% Similarity=0.104 Sum_probs=182.3
Q ss_pred eEEcCCCCEEEEEeCCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCcc
Q 014755 13 SCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAG 92 (419)
Q Consensus 13 ~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~ 92 (419)
++|||||++||+|+++.++||++.+++......+. .+..+++.++++.++..+..+++|++||+.+++.+..+. +...
T Consensus 25 v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~ 102 (355)
T 3vu4_A 25 YEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMR-HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAP 102 (355)
T ss_dssp EEECTTSSEEEEECSSEEEEEEETTEEEEEEEECS-CCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSC
T ss_pred EEECCCCCEEEEEcCCEEEEEecCCcceeeeeecC-CeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCc
Confidence 89999999999999888999999988766554433 588999999999886655455899999999999887775 6678
Q ss_pred EeEEEECCCCCEEEEEecCCCeEEEEEcCCC-eEEE-eccCCCCeeeEEEccCCCEEEEE-eecCCCCeEEEEeccCCe-
Q 014755 93 IAYARWSPDSRHILTTSDFQLRLTVWSLLNT-ACVH-VQSPKHASKGVAFTQDGKFAAIC-TRRDCKDYINLLSCHTWE- 168 (419)
Q Consensus 93 v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~-~~~~-~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~g~v~i~d~~~~~- 168 (419)
|.+++|+++. ++++. ++ .|++||+.++ +.+. +.. ....+++++ .+++++ +.. +|.|++||+++++
T Consensus 103 v~~v~~~~~~--~~~~~-~~-~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~--~g~v~iwd~~~~~~ 171 (355)
T 3vu4_A 103 VKDLFLSREF--IVVSY-GD-VISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFN--LGQIHITKLQSSGS 171 (355)
T ss_dssp EEEEEECSSE--EEEEE-TT-EEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSC--TTCEEEEECCC---
T ss_pred eEEEEEcCCE--EEEEE-cC-EEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCc--CcEEEEEECCCCCc
Confidence 9999998864 44443 45 8999999987 4443 222 445566777 677775 322 3899999999865
Q ss_pred --------------E-EEEEeccccceeeeeECCCCCeEEEEcCCCCce-EEEEcC-CCceEEEEeecCCCCceeEEEEc
Q 014755 169 --------------I-MGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYK-VLIYSP-DGRCLLKYQAYESGLGVKSISWS 231 (419)
Q Consensus 169 --------------~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~-i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s 231 (419)
+ +..+..|...|.+++|+|+++++++ ++.|++ |++||+ +++.+..+....+...|.+++|+
T Consensus 172 ~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s--~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s 249 (355)
T 3vu4_A 172 ATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVAT--CSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWS 249 (355)
T ss_dssp ---------------CCEEECCCSSCEEEEEECTTSSEEEE--EETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEEC
T ss_pred cccccccccccccCcccEEEEccCCceEEEEECCCCCEEEE--EeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEEC
Confidence 2 6778899999999999999999998 677998 999999 88998888732123389999999
Q ss_pred cCCCeEEEEEecCcEEEEEcCCce
Q 014755 232 PCGQFLAVGSYDQTLRVLNHLTWK 255 (419)
Q Consensus 232 ~~~~~l~~~~~d~~i~v~d~~~~~ 255 (419)
|++++|++++.|++|++||+..+.
T Consensus 250 ~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 250 TDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp TTSCEEEEEETTCEEEEEESSCCS
T ss_pred CCCCEEEEEECCCEEEEEEccCCC
Confidence 999999999999999999997653
No 120
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-34 Score=275.26 Aligned_cols=249 Identities=15% Similarity=0.236 Sum_probs=205.9
Q ss_pred eeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC--CeEEE-eccCCCCeeeEEEccC--CCEEEEEeecCCCCe
Q 014755 84 CKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN--TACVH-VQSPKHASKGVAFTQD--GKFAAICTRRDCKDY 158 (419)
Q Consensus 84 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~--~~~~~-~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~g~ 158 (419)
..+.+|.+.|++++|+|++++|++++.++ .|++||+.+ ++... +..|...|.+++|+|+ +++|++++.| |.
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg-~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D---g~ 78 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDK-TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD---GK 78 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTT-EEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT---SC
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCC-cEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC---Ce
Confidence 45678999999999999999999999987 999999984 34444 7789999999999988 8999999987 89
Q ss_pred EEEEeccCCe--EEEEEeccccceeeeeECCC--CCeEEEEcCCCCceEEEEcC-CCc--eEEEEeecCCCCceeEEEEc
Q 014755 159 INLLSCHTWE--IMGVFAVDTLDLADIEWSPD--DSAIVIWDSPLEYKVLIYSP-DGR--CLLKYQAYESGLGVKSISWS 231 (419)
Q Consensus 159 v~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~~~i~~~d~-~~~--~~~~~~~~~~~~~v~~~~~s 231 (419)
|++||+++++ .+..+..|...|.+++|+|+ +..+++ ++.++.|++||+ .+. ....+..+.. .|.+++|+
T Consensus 79 I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~s--gs~dg~I~vwdl~~~~~~~~~~~~~~~~--~v~~l~~~ 154 (753)
T 3jro_A 79 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLV--ASSDGKVSVVEFKENGTTSPIIIDAHAI--GVNSASWA 154 (753)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEE--EETTSEEEEEECCSSSCCCCEEEECCSS--CEEEEEEC
T ss_pred EEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEE--EeCCCcEEEEEeecCCCcceeEeecCCC--ceEEEEec
Confidence 9999999987 67778889999999999999 899988 667999999999 442 3334444444 89999999
Q ss_pred c-------------CCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccc
Q 014755 232 P-------------CGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQG 298 (419)
Q Consensus 232 ~-------------~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (419)
| +++++++++.||.|++||++++........
T Consensus 155 p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~------------------------------------ 198 (753)
T 3jro_A 155 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLES------------------------------------ 198 (753)
T ss_dssp CCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEE------------------------------------
T ss_pred CcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeee------------------------------------
Confidence 9 589999999999999999987632211110
Q ss_pred cccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccC---CeEEEEecCCCCceEEEeeccCCC------c
Q 014755 299 NSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSD---SQYICTRNDSMPTTLWIWDICRQE------P 369 (419)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~---g~~l~~~~~d~~~~i~iwd~~~~~------~ 369 (419)
.+.+|...|.+++|+|+ +++|++++.| |.|++||+.+++ .
T Consensus 199 -----------------------------~~~~h~~~V~~l~~sp~~~~~~~l~s~s~D--g~I~iwd~~~~~~~~~~~~ 247 (753)
T 3jro_A 199 -----------------------------TLEGHSDWVRDVAWSPTVLLRSYLASVSQD--RTCIIWTQDNEQGPWKKTL 247 (753)
T ss_dssp -----------------------------EECCCSSCEEEEEECCCCSSSEEEEEEESS--SCEEEEEESSSSSCCBCCB
T ss_pred -----------------------------eecCCCCcEEEEEeccCCCCCCEEEEEecC--CEEEEecCCCCCCcceeEE
Confidence 01247888999999999 9999999999 999999999874 2
Q ss_pred eeecccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCC
Q 014755 370 AAILVQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSG 407 (419)
Q Consensus 370 ~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 407 (419)
....+|...|++++|+|++++|++++.||.|++|++..
T Consensus 248 ~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 248 LKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp SSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred eccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 22234889999999999999999999999999999984
No 121
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.4e-33 Score=252.12 Aligned_cols=261 Identities=11% Similarity=0.183 Sum_probs=207.0
Q ss_pred EEEeecCcceeEEEEecC-CCeEEEEeccCCeEEEEEccC----------CcceeeeecCCccEeEEEECCCCC-EEEEE
Q 014755 41 VQLFSCLDKISYIEWALD-SEYILCGLYKRLMIQAWSLTQ----------PEWTCKIDEGLAGIAYARWSPDSR-HILTT 108 (419)
Q Consensus 41 ~~~~~~~~~v~~~~~s~~-~~~l~~~~~~~g~i~iw~~~~----------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~ 108 (419)
...+.|.+.|++++|+|+ +.+|++++.+ |.|++|++.+ .+....+..|...|.+++|+|+++ +|+++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~d-g~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPS-SDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSS-SCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCC-CcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence 445679999999999997 6788888765 8999999986 566778889999999999999998 88888
Q ss_pred ecCCCeEEEEEcCCCe----E----EEeccCCCCeeeEEEcc-CCCEEEEEeecCCCCeEEEEeccCC---eEEEEEecc
Q 014755 109 SDFQLRLTVWSLLNTA----C----VHVQSPKHASKGVAFTQ-DGKFAAICTRRDCKDYINLLSCHTW---EIMGVFAVD 176 (419)
Q Consensus 109 ~~~~~~i~iwd~~~~~----~----~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~g~v~i~d~~~~---~~~~~~~~~ 176 (419)
+.++ .|++|++..+. . ..+..|...+.+++|+| ++..|++++.+ |.|++||++++ +.+..+..|
T Consensus 201 ~~dg-~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d---g~i~i~d~~~~~~~~~~~~~~~~ 276 (430)
T 2xyi_A 201 SDDH-TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD---QKLMIWDTRNNNTSKPSHTVDAH 276 (430)
T ss_dssp CTTS-CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT---SEEEEEETTCSCSSSCSEEEECC
T ss_pred eCCC-eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC---CeEEEEECCCCCCCcceeEeecC
Confidence 8887 99999998732 1 22567888999999999 56788888776 89999999986 567778889
Q ss_pred ccceeeeeECCCCCe-EEEEcCCCCceEEEEcC-C-CceEEEEeecCCCCceeEEEEccCCC-eEEEEEecCcEEEEEcC
Q 014755 177 TLDLADIEWSPDDSA-IVIWDSPLEYKVLIYSP-D-GRCLLKYQAYESGLGVKSISWSPCGQ-FLAVGSYDQTLRVLNHL 252 (419)
Q Consensus 177 ~~~v~~~~~~~~~~~-l~~~~~~~~~~i~~~d~-~-~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~d~~i~v~d~~ 252 (419)
...|.+++|+|+++. +++ ++.++.|++||+ . +..+..+..|.. .|.+++|+|+++ +|++++.|+.|++||+.
T Consensus 277 ~~~v~~i~~~p~~~~~l~t--g~~dg~v~vwd~~~~~~~~~~~~~h~~--~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~ 352 (430)
T 2xyi_A 277 TAEVNCLSFNPYSEFILAT--GSADKTVALWDLRNLKLKLHSFESHKD--EIFQVQWSPHNETILASSGTDRRLHVWDLS 352 (430)
T ss_dssp SSCEEEEEECSSCTTEEEE--EETTSEEEEEETTCTTSCSEEEECCSS--CEEEEEECSSCTTEEEEEETTSCCEEEEGG
T ss_pred CCCeEEEEeCCCCCCEEEE--EeCCCeEEEEeCCCCCCCeEEeecCCC--CEEEEEECCCCCCEEEEEeCCCcEEEEeCC
Confidence 999999999999985 555 566899999999 4 567778877665 899999999995 68999999999999987
Q ss_pred CceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCC
Q 014755 253 TWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNP 332 (419)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (419)
............. +. ......+.+|
T Consensus 353 ~~~~~~~~~~~~~---------------------------------------~~----------------~~~~~~~~~h 377 (430)
T 2xyi_A 353 KIGEEQSTEDAED---------------------------------------GP----------------PELLFIHGGH 377 (430)
T ss_dssp GTTCCCCHHHHHH---------------------------------------CC----------------TTEEEECCCC
T ss_pred CCccccCcccccc---------------------------------------CC----------------cceEEEcCCC
Confidence 6332111000000 00 0000112358
Q ss_pred CcceEEEEEccCCe-EEEEecCCCCceEEEeeccCC
Q 014755 333 KQGIGLMSWSSDSQ-YICTRNDSMPTTLWIWDICRQ 367 (419)
Q Consensus 333 ~~~v~~~~~s~~g~-~l~~~~~d~~~~i~iwd~~~~ 367 (419)
...|.+++|+|+++ +|++++.| |.|+||++...
T Consensus 378 ~~~v~~~~~~p~~~~~l~s~s~d--g~i~iw~~~~~ 411 (430)
T 2xyi_A 378 TAKISDFSWNPNEPWIICSVSED--NIMQVWQMAEN 411 (430)
T ss_dssp SSCEEEEEECSSSTTEEEEEETT--SEEEEEEECHH
T ss_pred CCCceEEEECCCCCCEEEEEECC--CCEEEeEcccc
Confidence 88899999999999 89999998 99999998753
No 122
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=5e-33 Score=231.98 Aligned_cols=272 Identities=14% Similarity=0.119 Sum_probs=199.2
Q ss_pred EEEEEeCCeEEEEecCCC---cEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEE
Q 014755 21 YIAVAVDYRLVVRDAHSF---KVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYA 96 (419)
Q Consensus 21 ~la~~~~~~i~i~~~~~~---~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~ 96 (419)
-|+++++..|++|+..++ +.+.... |+.+|..+.+.||-.-|++..- |. -+...|..+
T Consensus 56 ~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~----------------~~~~~v~sl 117 (356)
T 2w18_A 56 CIITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVAL--GN----------------LEIREIRAL 117 (356)
T ss_dssp EEEEEESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEE--CS----------------SSEEEEEEE
T ss_pred EEEEeccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeee--cc----------------ccccceEEE
Confidence 577788999999999988 6666555 7779999999998766655442 21 133568899
Q ss_pred EECCC----CCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEec-cCCeEEE
Q 014755 97 RWSPD----SRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSC-HTWEIMG 171 (419)
Q Consensus 97 ~~~~~----~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~-~~~~~~~ 171 (419)
+++|| ++.+++++. .+.+|++.+++ .+.++.. +.++.|++|++ .+++.+.
T Consensus 118 a~spd~~~~~~~l~s~g~---~~~v~~l~~g~---------------------lv~ss~~-g~d~~V~~~~~s~dG~~~~ 172 (356)
T 2w18_A 118 FCSSDDESEKQVLLKSGN---IKAVLGLTKRR---------------------LVSSSGT-LSDQQVEVMTFAEDGGGKE 172 (356)
T ss_dssp CC------CCEEEEEEEE---EEEEEEETTTE---------------------EEEEESS-STTCEEEEEEECTTSCEEE
T ss_pred EECCCccccccEEEeCCC---eEEEEecCCCc---------------------EEEeccc-CCCCcEEEEEECCCCceee
Confidence 99999 999999774 57788664433 3333221 11267888877 3477777
Q ss_pred EEeccccceeeeeECC---CCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCC-CCceeEEEEccCCCeE---------
Q 014755 172 VFAVDTLDLADIEWSP---DDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYES-GLGVKSISWSPCGQFL--------- 237 (419)
Q Consensus 172 ~~~~~~~~v~~~~~~~---~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l--------- 237 (419)
.+..|...+..++|+| ++..|+. ++.|++|++||+ +|++++++..+.. ...+.+++|+|+|+++
T Consensus 173 s~~~~~~~v~~l~fs~~~g~~~~LaS--gS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~ 250 (356)
T 2w18_A 173 NQFLMPPEETILTFAEVQGMQEALLG--TTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAK 250 (356)
T ss_dssp EEEECCCSSCEEEEEEEETSTTEEEE--EETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC-----
T ss_pred eeccCCCceeeEEeeccCCCCceEEE--ecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCc
Confidence 7778888999999999 7788888 677999999999 8999999975432 2367788999999876
Q ss_pred ---EEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEec
Q 014755 238 ---AVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVM 314 (419)
Q Consensus 238 ---~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (419)
++|+.|++|++||..+++.+..+... + |
T Consensus 251 w~laSGs~D~tIklWd~~tgk~l~v~~~~-----------~-----p--------------------------------- 281 (356)
T 2w18_A 251 ESESLRSPVFQLIVINPKTTLSVGVMLYC-----------L-----P--------------------------------- 281 (356)
T ss_dssp -------CCEEEEEEETTTTEEEEEEEEC-----------C-----C---------------------------------
T ss_pred ceeeccCCCcEEEEEECCCCEEEEEEEee-----------c-----c---------------------------------
Confidence 56778899999999998877654200 0 0
Q ss_pred cCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec-ccCCCee-EEEeCCCCCeEE
Q 014755 315 EIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL-VQKDPIR-AATWDPTCTRLV 392 (419)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~-~~~~~v~-~~~~s~~~~~l~ 392 (419)
.+|...+.+..+ ++.++|+++.| ++|+|||+.+++++..+ +|...+. +++|||||++|+
T Consensus 282 ---------------~Gh~~~~lsg~~--sg~~lASgS~D--gTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~La 342 (356)
T 2w18_A 282 ---------------PGQAGRFLEGDV--KDHCAAAILTS--GTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLL 342 (356)
T ss_dssp ---------------TTCCCCEEEEEE--ETTEEEEEETT--SCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEE
T ss_pred ---------------CCCcceeEcccc--CCCEEEEEcCC--CcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEE
Confidence 024333333333 48899999999 99999999999998887 4777655 689999999999
Q ss_pred EEeCCCcEEEeec
Q 014755 393 LCTGSSHLYMWTP 405 (419)
Q Consensus 393 s~~~dg~i~vw~~ 405 (419)
+|+.|++|+|||+
T Consensus 343 SGS~D~TIklWd~ 355 (356)
T 2w18_A 343 AGQKDGNIFVYHY 355 (356)
T ss_dssp EECTTSCEEEEEE
T ss_pred EEECCCcEEEecC
Confidence 9999999999996
No 123
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.2e-34 Score=273.34 Aligned_cols=248 Identities=10% Similarity=0.129 Sum_probs=207.0
Q ss_pred eecCcceeEEEEecCCCeEEEEeccCCeEEEEEcc--CCcceeeeecCCccEeEEEECCC--CCEEEEEecCCCeEEEEE
Q 014755 44 FSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLT--QPEWTCKIDEGLAGIAYARWSPD--SRHILTTSDFQLRLTVWS 119 (419)
Q Consensus 44 ~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~~i~iwd 119 (419)
.+|.+.|++++|+|++++|++++.| |.|++||+. +++....+.+|..+|.+++|+|+ +++|++++.|+ .|++||
T Consensus 6 ~gH~~~V~~l~~s~dg~~latg~~d-g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg-~I~vwd 83 (753)
T 3jro_A 6 NAHNELIHDAVLDYYGKRLATCSSD-KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG-KVLIWK 83 (753)
T ss_dssp --CCCCEEEECCCSSSCCEEEEETT-TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTS-CEEEEE
T ss_pred ccCcceeEEEEECCCCCeEEEEECC-CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCC-eEEEEE
Confidence 4699999999999999999999976 899999998 44667778899999999999988 99999999988 999999
Q ss_pred cCCCe--EEE-eccCCCCeeeEEEccC--CCEEEEEeecCCCCeEEEEeccCC--eEEEEEeccccceeeeeECC-----
Q 014755 120 LLNTA--CVH-VQSPKHASKGVAFTQD--GKFAAICTRRDCKDYINLLSCHTW--EIMGVFAVDTLDLADIEWSP----- 187 (419)
Q Consensus 120 ~~~~~--~~~-~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~g~v~i~d~~~~--~~~~~~~~~~~~v~~~~~~~----- 187 (419)
+.+++ ... +..|...+.+++|+|+ ++.+++++.| |.|++||++++ .....+..|...|.+++|+|
T Consensus 84 ~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d---g~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~ 160 (753)
T 3jro_A 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD---GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 160 (753)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT---SEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---
T ss_pred CCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCC---CcEEEEEeecCCCcceeEeecCCCceEEEEecCccccc
Confidence 99986 333 7778999999999999 9999999987 89999999886 34455677889999999999
Q ss_pred --------CCCeEEEEcCCCCceEEEEcC-CC----ceEEEEeecCCCCceeEEEEccC---CCeEEEEEecCcEEEEEc
Q 014755 188 --------DDSAIVIWDSPLEYKVLIYSP-DG----RCLLKYQAYESGLGVKSISWSPC---GQFLAVGSYDQTLRVLNH 251 (419)
Q Consensus 188 --------~~~~l~~~~~~~~~~i~~~d~-~~----~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~d~~i~v~d~ 251 (419)
++..+++ ++.|+.|++||+ .+ .....+..|.. .|.+++|+|+ +++|++++.||.|++||+
T Consensus 161 ~~~~~~~~d~~~l~s--gs~dg~I~iwd~~~~~~~~~~~~~~~~h~~--~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~ 236 (753)
T 3jro_A 161 DGEHNGTKESRKFVT--GGADNLVKIWKYNSDAQTYVLESTLEGHSD--WVRDVAWSPTVLLRSYLASVSQDRTCIIWTQ 236 (753)
T ss_dssp ------CGGGCCEEE--EETTSCEEEEEEETTTTEEEEEEEECCCSS--CEEEEEECCCCSSSEEEEEEESSSCEEEEEE
T ss_pred ccccccCCCCCEEEE--EECCCeEEEEeccCCcccceeeeeecCCCC--cEEEEEeccCCCCCCEEEEEecCCEEEEecC
Confidence 5888888 667999999999 44 34445555554 8999999999 899999999999999999
Q ss_pred CCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCC
Q 014755 252 LTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPN 331 (419)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (419)
.+++...... ......
T Consensus 237 ~~~~~~~~~~----------------------------------------------------------------~~~~~~ 252 (753)
T 3jro_A 237 DNEQGPWKKT----------------------------------------------------------------LLKEEK 252 (753)
T ss_dssp SSSSSCCBCC----------------------------------------------------------------BSSSSC
T ss_pred CCCCCcceeE----------------------------------------------------------------EeccCC
Confidence 8754211110 000124
Q ss_pred CCcceEEEEEccCCeEEEEecCCCCceEEEeeccC
Q 014755 332 PKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICR 366 (419)
Q Consensus 332 ~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~ 366 (419)
|...|++++|+|+|+++++++.| |.|++|++..
T Consensus 253 ~~~~v~~l~~spdg~~l~s~s~D--g~I~vwd~~~ 285 (753)
T 3jro_A 253 FPDVLWRASWSLSGNVLALSGGD--NKVTLWKENL 285 (753)
T ss_dssp CSSCCCCEEECTTTCCEEEECSS--SCEECCBCCS
T ss_pred CCCceEEEEEcCCCCEEEEEcCC--CEEEEEecCC
Confidence 67789999999999999999999 9999999874
No 124
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=100.00 E-value=9.9e-33 Score=246.13 Aligned_cols=300 Identities=13% Similarity=0.086 Sum_probs=232.8
Q ss_pred eEEcCCCC-EEEEEe-----CC----eEEEEec--CCCcEEE---EeecCcceeEEEEec--------------CCCeEE
Q 014755 13 SCFSPNAR-YIAVAV-----DY----RLVVRDA--HSFKVVQ---LFSCLDKISYIEWAL--------------DSEYIL 63 (419)
Q Consensus 13 ~~~s~d~~-~la~~~-----~~----~i~i~~~--~~~~~~~---~~~~~~~v~~~~~s~--------------~~~~l~ 63 (419)
..|++.|. ++++|+ +| .++|||+ .+++.+. ...|...+..+++++ .+..++
T Consensus 68 ~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~ 147 (415)
T 2hqs_A 68 AAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIA 147 (415)
T ss_dssp HHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEE
T ss_pred HHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEE
Confidence 56888774 565764 46 7999999 8888663 345777788777775 266777
Q ss_pred EEecc--C---CeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCC--CeEEEEEcCCCeEEEeccCCCCee
Q 014755 64 CGLYK--R---LMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQ--LRLTVWSLLNTACVHVQSPKHASK 136 (419)
Q Consensus 64 ~~~~~--~---g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~--~~i~iwd~~~~~~~~~~~~~~~~~ 136 (419)
+++.+ + +.|++||++. .....+..|...+.+++|+|+|++|++++.++ ..|++||+++++...+..+...+.
T Consensus 148 ~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~ 226 (415)
T 2hqs_A 148 YVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNG 226 (415)
T ss_dssp EEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEE
T ss_pred EEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCccc
Confidence 76654 1 5999999975 44667888899999999999999999998763 389999999998888777888899
Q ss_pred eEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcC-CCCceEEEEcCCCceEEE
Q 014755 137 GVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDS-PLEYKVLIYSPDGRCLLK 215 (419)
Q Consensus 137 ~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~~~i~~~d~~~~~~~~ 215 (419)
+++|+|||+.|++....++...|++||+++++. ..+..+...+.+++|+|||+.|++... .....|++||+.+.....
T Consensus 227 ~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~ 305 (415)
T 2hqs_A 227 APAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQR 305 (415)
T ss_dssp EEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEE
T ss_pred CEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEE
Confidence 999999999988655433345799999998776 566677788999999999998887432 122378889994444444
Q ss_pred EeecCCCCceeEEEEccCCCeEEEEEec---CcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeecc
Q 014755 216 YQAYESGLGVKSISWSPCGQFLAVGSYD---QTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLN 292 (419)
Q Consensus 216 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d---~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (419)
+..+.. .+.+++|+|+|++|++++.+ ..|++||+.+++... +.
T Consensus 306 l~~~~~--~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~-l~------------------------------- 351 (415)
T 2hqs_A 306 ITWEGS--QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQV-LS------------------------------- 351 (415)
T ss_dssp CCCSSS--EEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEE-CC-------------------------------
T ss_pred EecCCC--cccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEE-ec-------------------------------
Confidence 544443 78899999999999998875 589999998876532 21
Q ss_pred CccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCc---eEEEeeccCCCc
Q 014755 293 DDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPT---TLWIWDICRQEP 369 (419)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~---~i~iwd~~~~~~ 369 (419)
.+. .+.+++|+|||++|++++.+ + .|++||+..+..
T Consensus 352 --------------------------------------~~~-~~~~~~~spdg~~l~~~s~~--~~~~~l~~~d~~g~~~ 390 (415)
T 2hqs_A 352 --------------------------------------STF-LDETPSLAPNGTMVIYSSSQ--GMGSVLNLVSTDGRFK 390 (415)
T ss_dssp --------------------------------------CSS-SCEEEEECTTSSEEEEEEEE--TTEEEEEEEETTSCCE
T ss_pred --------------------------------------CCC-CcCCeEEcCCCCEEEEEEcC--CCccEEEEEECCCCcE
Confidence 121 47889999999999988876 5 799999987766
Q ss_pred eeecccCCCeeEEEeCCCCC
Q 014755 370 AAILVQKDPIRAATWDPTCT 389 (419)
Q Consensus 370 ~~~~~~~~~v~~~~~s~~~~ 389 (419)
..+.+|.+.|.+++|+|...
T Consensus 391 ~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 391 ARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp EECCCSSSEEEEEEECCCCC
T ss_pred EEeeCCCCCCcCCccccccc
Confidence 66667999999999999754
No 125
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=4.4e-34 Score=253.54 Aligned_cols=308 Identities=9% Similarity=0.042 Sum_probs=197.1
Q ss_pred CCEEEEEeCCeEEEEecCCC----------cEEEEeecCcceeEEEEe--------------------cCCCeEEEEecc
Q 014755 19 ARYIAVAVDYRLVVRDAHSF----------KVVQLFSCLDKISYIEWA--------------------LDSEYILCGLYK 68 (419)
Q Consensus 19 ~~~la~~~~~~i~i~~~~~~----------~~~~~~~~~~~v~~~~~s--------------------~~~~~l~~~~~~ 68 (419)
..+++++.++.|.+|+.... ..+....+...+..+.|+ +++.+|++++.|
T Consensus 31 ~~l~a~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~las~~~d 110 (393)
T 4gq1_A 31 SNLLAIGHDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPTLHLSFSSSCSYSENLHDGDGNVNSSPVYSLFLACVCQD 110 (393)
T ss_dssp TTEEEEEESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCEEEEEECTTCEEECC----------CCEEEEEEEEEETT
T ss_pred CCEEEEECCCCEEEEECCCCCcccccccceeeeEEEecCCCeeeEeecCCccccccccCCCcceeecCCCCCEEEEEeCC
Confidence 36777778999999975311 112233344555555544 455678899876
Q ss_pred CCeEEEEEccCCccee-----eeecCCccEeEEEECC--------CCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCC
Q 014755 69 RLMIQAWSLTQPEWTC-----KIDEGLAGIAYARWSP--------DSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHA 134 (419)
Q Consensus 69 ~g~i~iw~~~~~~~~~-----~~~~~~~~v~~~~~~~--------~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~ 134 (419)
++|+|||+++++... .+.+|.+.|.+++|+| |+++|++++.|+ +|++||++++.... +..+...
T Consensus 111 -~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~-tv~~Wd~~~~~~~~~~~~~~~~ 188 (393)
T 4gq1_A 111 -NTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC-TLIIWRLTDEGPILAGYPLSSP 188 (393)
T ss_dssp -SCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS-EEEEEEEETTEEEEEEEECSSC
T ss_pred -CcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC-eEEEEECCCCceeeeecCCCCC
Confidence 899999999886432 3568999999999998 889999999998 99999998876665 7788899
Q ss_pred eeeEEEccCCC-EEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceE
Q 014755 135 SKGVAFTQDGK-FAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCL 213 (419)
Q Consensus 135 ~~~~~~~~~~~-~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~ 213 (419)
+.+++|+|++. +|++++.| +.|++||+++++.......+........++++...+. ..
T Consensus 189 v~~v~~~p~~~~~l~~~~~d---~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~------------------~~ 247 (393)
T 4gq1_A 189 GISVQFRPSNPNQLIVGERN---GNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLV------------------NT 247 (393)
T ss_dssp EEEEEEETTEEEEEEEEETT---SEEEEEETTCCC----------CSCCCSEEEESGGGC--------------------
T ss_pred cEEEEECCCCCceEEecCCC---CEEEEEECCCCcccccccccCCcccceEEecccccce------------------ee
Confidence 99999999884 78888876 8999999998876655444332221111111110000 00
Q ss_pred EEEeecCCCCceeEEEEc-cCCCeEEEEEecCcEEEEEcCCceeeeeec-ccccccCCCccceeccCCCcccccceeeec
Q 014755 214 LKYQAYESGLGVKSISWS-PCGQFLAVGSYDQTLRVLNHLTWKTFAEFM-HLSTVRGPCFPAVFKEVDEPLQLDMSELCL 291 (419)
Q Consensus 214 ~~~~~~~~~~~v~~~~~s-~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (419)
.....+. ..+.++.|+ |+++.|++++.|+++++||+.+++....+. +...+. .+.+.+ +..
T Consensus 248 ~~~~~~~--~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~----~~~~~~----~~~------- 310 (393)
T 4gq1_A 248 CHSSGIA--SSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLG----PKNLLP----NVQ------- 310 (393)
T ss_dssp ----CCS--SSCSEEEEETTTTCEEEEECTTSEEEEEEC-----------------------CCSC----SEE-------
T ss_pred eeccccc--ccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccc----cEEEcc----ccc-------
Confidence 1112233 378899987 799999999999999999998887666554 222211 011110 000
Q ss_pred cCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEcc--CCeEEEEecCCCCceEEEeeccCCCc
Q 014755 292 NDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSS--DSQYICTRNDSMPTTLWIWDICRQEP 369 (419)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~g~~l~~~~~d~~~~i~iwd~~~~~~ 369 (419)
....+...+. ..++| ++.++++|+.| +.|+|||+.+++.
T Consensus 311 ------------------------------------~~~~~~~~~~-~~~~~~~~~~~~~sgs~D--g~V~lwd~~~~~~ 351 (393)
T 4gq1_A 311 ------------------------------------GISLFPSLLG-ACPHPRYMDYFATAHSQH--GLIQLINTYEKDS 351 (393)
T ss_dssp ------------------------------------EECSSCCSSC-CEECSSCTTEEEEEETTT--TEEEEEETTCTTC
T ss_pred ------------------------------------cccccCccee-EEEccCCCCEEEEEECCC--CEEEEEECCCCcE
Confidence 0000111122 33433 56677888888 9999999999887
Q ss_pred eeec-ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 370 AAIL-VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 370 ~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
.... +|..+|++++|+|||++||+++.|| +.+|.+.
T Consensus 352 ~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 352 NSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp CEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred EEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 6544 6999999999999999999998765 6666664
No 126
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=2.8e-32 Score=262.52 Aligned_cols=327 Identities=12% Similarity=0.083 Sum_probs=243.6
Q ss_pred CeEEcCCCCEEEEEe--CC-----eEEEEecCCCcEEEEeecC-------------------------cceeEEEEecCC
Q 014755 12 PSCFSPNARYIAVAV--DY-----RLVVRDAHSFKVVQLFSCL-------------------------DKISYIEWALDS 59 (419)
Q Consensus 12 ~~~~s~d~~~la~~~--~~-----~i~i~~~~~~~~~~~~~~~-------------------------~~v~~~~~s~~~ 59 (419)
.++|||||++||+++ ++ .|++||+.+++....+.+. ..+.+++|||||
T Consensus 41 ~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg 120 (741)
T 2ecf_A 41 KPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDA 120 (741)
T ss_dssp EEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTS
T ss_pred CceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCC
Confidence 489999999999997 45 7999999999988776532 237899999999
Q ss_pred CeEEEEeccCCeEEEEEccCCc--ceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCC---
Q 014755 60 EYILCGLYKRLMIQAWSLTQPE--WTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHA--- 134 (419)
Q Consensus 60 ~~l~~~~~~~g~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~--- 134 (419)
++|++++. +.|++||+.+++ ....+..+...+..++|+|||++|++++. + .|++||+.+++...+......
T Consensus 121 ~~l~~~~~--~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~-~i~~~d~~~g~~~~~~~~~~~~~~ 196 (741)
T 2ecf_A 121 QRLLFPLG--GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-R-NLWVIDLASGRQMQLTADGSTTIG 196 (741)
T ss_dssp SEEEEEET--TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-T-EEEEEETTTTEEEECCCCCCSSEE
T ss_pred CEEEEEeC--CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-C-cEEEEecCCCCEEEeccCCcccee
Confidence 99999984 799999999883 34567778888999999999999999875 4 899999999988774333222
Q ss_pred --------------eeeEEEccCCCEEEEEeecCC------------------------------CCeEEEEeccC-CeE
Q 014755 135 --------------SKGVAFTQDGKFAAICTRRDC------------------------------KDYINLLSCHT-WEI 169 (419)
Q Consensus 135 --------------~~~~~~~~~~~~l~~~~~~~~------------------------------~g~v~i~d~~~-~~~ 169 (419)
+..++|+|||++|++++.+.. ...|++||+.+ ++.
T Consensus 197 ~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~ 276 (741)
T 2ecf_A 197 NGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQT 276 (741)
T ss_dssp ESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCC
T ss_pred ccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCce
Confidence 478999999999999877521 01788999988 775
Q ss_pred EEEEe--ccccceeeeeECCCCCeEEEEcC---CCCceEEEEcC-CCceEEEEeecCCC--CceeEEEEccCCCeEEEEE
Q 014755 170 MGVFA--VDTLDLADIEWSPDDSAIVIWDS---PLEYKVLIYSP-DGRCLLKYQAYESG--LGVKSISWSPCGQFLAVGS 241 (419)
Q Consensus 170 ~~~~~--~~~~~v~~~~~~~~~~~l~~~~~---~~~~~i~~~d~-~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~ 241 (419)
..... .+...+..++| |||+.|++... ..+..|++||+ +++....+..+... ..+..++|+|||+++++++
T Consensus 277 ~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~ 355 (741)
T 2ecf_A 277 QWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSE 355 (741)
T ss_dssp EEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEEC
T ss_pred EEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEec
Confidence 54432 36678899999 99999986422 23578999999 67666655544321 0246899999999888888
Q ss_pred ecCcEEEEEcC-CceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCC
Q 014755 242 YDQTLRVLNHL-TWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISL 320 (419)
Q Consensus 242 ~d~~i~v~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (419)
.|+.++||.+. +++ ...+.
T Consensus 356 ~~g~~~l~~~~~~~~-~~~l~----------------------------------------------------------- 375 (741)
T 2ecf_A 356 RTGFQHLYRIDSKGK-AAALT----------------------------------------------------------- 375 (741)
T ss_dssp TTSSCEEEEECSSSC-EEESC-----------------------------------------------------------
T ss_pred CCCccEEEEEcCCCC-eeeee-----------------------------------------------------------
Confidence 89988888765 232 33221
Q ss_pred CCCCCCCCCCCCCcceEEE-EEccCCeEEEEe-cCCCCceEEEeeccC-CCceeecccCCCeeEEEeCCCCCeEEEEeCC
Q 014755 321 PFQKPPTDKPNPKQGIGLM-SWSSDSQYICTR-NDSMPTTLWIWDICR-QEPAAILVQKDPIRAATWDPTCTRLVLCTGS 397 (419)
Q Consensus 321 ~~~~~~~~~~~~~~~v~~~-~~s~~g~~l~~~-~~d~~~~i~iwd~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 397 (419)
.|...+..+ .|+|||+.|++. +.+.+..++||++.. ++....+.....+..++|||||++|+....+
T Consensus 376 ----------~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~~~~~~~~~~spdg~~l~~~~~~ 445 (741)
T 2ecf_A 376 ----------HGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSKAPGMHSASFARNASVYVDSWSN 445 (741)
T ss_dssp ----------CSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCCSCSEEEEEECTTSSEEEEEEEE
T ss_pred ----------ecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeecccCCCceEEEECCCCCEEEEEecC
Confidence 234446666 599999877554 444112899999874 5544455456778999999999988766443
Q ss_pred ----CcEEEeecCCCeEEec
Q 014755 398 ----SHLYMWTPSGAYCVSN 413 (419)
Q Consensus 398 ----g~i~vw~~~~~~~~~~ 413 (419)
..+.+|+..+++...+
T Consensus 446 ~~~p~~~~l~~~~~~~~~~l 465 (741)
T 2ecf_A 446 NSTPPQIELFRANGEKIATL 465 (741)
T ss_dssp TTEEEEEEEEETTSCEEECS
T ss_pred CCCCCeEEEEEcCCCeEEEe
Confidence 4689999877655443
No 127
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=100.00 E-value=2.9e-31 Score=263.58 Aligned_cols=359 Identities=12% Similarity=0.010 Sum_probs=251.8
Q ss_pred eEEcCCCCEEEEEeCCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEecc---C--CeEEEEEccCCcceeeee
Q 014755 13 SCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYK---R--LMIQAWSLTQPEWTCKID 87 (419)
Q Consensus 13 ~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~---~--g~i~iw~~~~~~~~~~~~ 87 (419)
.+||| +.||+++.+.|++|++.+++..++..|...+.+++|||||++||+++.+ + ..|++|++.+++ ...+.
T Consensus 20 ~~~S~--~~iaf~~~~~l~~~~~~gg~~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~-~~~lt 96 (1045)
T 1k32_A 20 PDIHG--DRIIFVCCDDLWEHDLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE-IKRIT 96 (1045)
T ss_dssp EEEET--TEEEEEETTEEEEEETTTCCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE-EEECC
T ss_pred cEEeC--CEEEEEECCcEEEEECCCCcEEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC-eEEcc
Confidence 68885 5999999899999999999988888899999999999999999988643 2 379999998876 56788
Q ss_pred cCCccE-------eEEEECCCCCEEEEEecC-----CCeEEEEEcCCCeEEEecc-------------------------
Q 014755 88 EGLAGI-------AYARWSPDSRHILTTSDF-----QLRLTVWSLLNTACVHVQS------------------------- 130 (419)
Q Consensus 88 ~~~~~v-------~~~~~~~~~~~l~~~~~~-----~~~i~iwd~~~~~~~~~~~------------------------- 130 (419)
.|...+ ..++|+|||+.+++++.+ ...|.+|++.+++...+..
T Consensus 97 ~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~ 176 (1045)
T 1k32_A 97 YFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHW 176 (1045)
T ss_dssp CCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTS
T ss_pred cCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCcccc
Confidence 888888 899999999966666532 1268888888776554222
Q ss_pred -------------------------CCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC-CeEEEEEeccccceeeee
Q 014755 131 -------------------------PKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT-WEIMGVFAVDTLDLADIE 184 (419)
Q Consensus 131 -------------------------~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~-~~~~~~~~~~~~~v~~~~ 184 (419)
+...+.++.|+++ ..++++..+ +.+.+|.+.. +.....+..+. .+..++
T Consensus 177 ~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~d---g~~~l~~~~~~g~~~~~l~~~~-~~~~~~ 251 (1045)
T 1k32_A 177 KGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDID---GFGQIYSTDLDGKDLRKHTSFT-DYYPRH 251 (1045)
T ss_dssp TTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTT---SSCEEEEEETTSCSCEECCCCC-SSCEEE
T ss_pred ccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEecc---CceEEEEEeCCCCcceEecCCC-Ccceee
Confidence 2333455566665 333333332 5666776543 33334444443 456779
Q ss_pred ECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecC---------CCCceeEEEEc-cCCCeEEEEEecCcEEEEEcCCc
Q 014755 185 WSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYE---------SGLGVKSISWS-PCGQFLAVGSYDQTLRVLNHLTW 254 (419)
Q Consensus 185 ~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~---------~~~~v~~~~~s-~~~~~l~~~~~d~~i~v~d~~~~ 254 (419)
|+|||+.+++. .++.|++|++....+..+..+. +...+.+++|+ |+|++|++++ ++.|++|++.++
T Consensus 252 ~SpDG~~la~~---~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~ 327 (1045)
T 1k32_A 252 LNTDGRRILFS---KGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGT 327 (1045)
T ss_dssp EEESSSCEEEE---ETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSS
T ss_pred EcCCCCEEEEE---eCCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCC
Confidence 99999998874 3889999999555554443321 11258899999 9999999988 789999999877
Q ss_pred eeeeeecccc-cccCCCccceeccCCCcccccceeeeccCccccccccccCCceEE-EEEeccCCCCCCCCCCCCCCCCC
Q 014755 255 KTFAEFMHLS-TVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKV-RYEVMEIPISLPFQKPPTDKPNP 332 (419)
Q Consensus 255 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 332 (419)
+......+.. .+ ..+.+. ++....+... ..... .++..... ...+..|
T Consensus 328 ~~~~~~~~~~~~~--------------------~~~~~s-dg~~l~~~s~-~~~l~~~~d~~~~~--------~~~l~~~ 377 (1045)
T 1k32_A 328 YVLKVPEPLRIRY--------------------VRRGGD-TKVAFIHGTR-EGDFLGIYDYRTGK--------AEKFEEN 377 (1045)
T ss_dssp BEEECSCCSCEEE--------------------EEECSS-SEEEEEEEET-TEEEEEEEETTTCC--------EEECCCC
T ss_pred ceEEccCCCcceE--------------------EeeeEc-CCCeEEEEEC-CCceEEEEECCCCC--------ceEecCC
Confidence 6544222222 11 122222 1111111111 11111 22222110 0112256
Q ss_pred CcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec-ccCCCeeEEEeCCCCCeEEEEeCCC----------cEE
Q 014755 333 KQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL-VQKDPIRAATWDPTCTRLVLCTGSS----------HLY 401 (419)
Q Consensus 333 ~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg----------~i~ 401 (419)
...+..++|||||++|++++.+ +.|++||+.++++..+. +|...+.+++|||||++|++++.++ .|+
T Consensus 378 ~~~~~~~~~SpDG~~la~~~~~--~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~ 455 (1045)
T 1k32_A 378 LGNVFAMGVDRNGKFAVVANDR--FEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIH 455 (1045)
T ss_dssp CCSEEEEEECTTSSEEEEEETT--SEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEE
T ss_pred ccceeeeEECCCCCEEEEECCC--CeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEE
Confidence 6789999999999999999998 99999999999988877 6899999999999999998887654 899
Q ss_pred EeecCCCeEEecCC
Q 014755 402 MWTPSGAYCVSNPL 415 (419)
Q Consensus 402 vw~~~~~~~~~~~~ 415 (419)
+||+.+++...+..
T Consensus 456 l~d~~~g~~~~l~~ 469 (1045)
T 1k32_A 456 VYDMEGRKIFAATT 469 (1045)
T ss_dssp EEETTTTEEEECSC
T ss_pred EEECCCCcEEEeeC
Confidence 99999888665543
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=100.00 E-value=3.9e-32 Score=242.29 Aligned_cols=295 Identities=12% Similarity=0.042 Sum_probs=225.5
Q ss_pred cceeEEEEecCCCeEE-EEec---cCC----eEEEEEc--cCCcce--eeeecCCccEeEEEECC--------------C
Q 014755 48 DKISYIEWALDSEYIL-CGLY---KRL----MIQAWSL--TQPEWT--CKIDEGLAGIAYARWSP--------------D 101 (419)
Q Consensus 48 ~~v~~~~~s~~~~~l~-~~~~---~~g----~i~iw~~--~~~~~~--~~~~~~~~~v~~~~~~~--------------~ 101 (419)
..+...+|++.|..++ +|+. .+| .+++||+ .+++.+ ..+..|...+..+++++ .
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~ 142 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAF 142 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 4677888988876444 6652 247 8999999 888876 44777777777666654 2
Q ss_pred CCEEEEEecCC-----CeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEecc
Q 014755 102 SRHILTTSDFQ-----LRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVD 176 (419)
Q Consensus 102 ~~~l~~~~~~~-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~ 176 (419)
+..+++++.+. +.|++||+.++....+..+...+.+++|+|+|++|++++.++....|++||+++++.. .+..+
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~ 221 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASF 221 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECC
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecC
Confidence 66677766541 4999999987766667778889999999999999999998744469999999998775 46667
Q ss_pred ccceeeeeECCCCCeEEEE-cCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEec-C--cEEEEEcC
Q 014755 177 TLDLADIEWSPDDSAIVIW-DSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYD-Q--TLRVLNHL 252 (419)
Q Consensus 177 ~~~v~~~~~~~~~~~l~~~-~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-~--~i~v~d~~ 252 (419)
...+.+++|+|||+.|++. +...+..|++||+.......+..+.. .+.+++|+|||++|++++.+ + .|++||+.
T Consensus 222 ~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~--~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~ 299 (415)
T 2hqs_A 222 PRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRS--NNTEPTWFPDSQNLAFTSDQAGRPQVYKVNIN 299 (415)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSS--CEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred CCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCC--cccceEECCCCCEEEEEECCCCCcEEEEEECC
Confidence 7889999999999988853 22334569999994434455555444 79999999999999988864 4 67778887
Q ss_pred CceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCC
Q 014755 253 TWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNP 332 (419)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (419)
+++... +. .+
T Consensus 300 ~~~~~~-l~---------------------------------------------------------------------~~ 309 (415)
T 2hqs_A 300 GGAPQR-IT---------------------------------------------------------------------WE 309 (415)
T ss_dssp SSCCEE-CC---------------------------------------------------------------------CS
T ss_pred CCCEEE-Ee---------------------------------------------------------------------cC
Confidence 765322 11 13
Q ss_pred CcceEEEEEccCCeEEEEecCC-CCceEEEeeccCCCceeecccCCCeeEEEeCCCCCeEEEEeCCC---cEEEeecCCC
Q 014755 333 KQGIGLMSWSSDSQYICTRNDS-MPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCTRLVLCTGSS---HLYMWTPSGA 408 (419)
Q Consensus 333 ~~~v~~~~~s~~g~~l~~~~~d-~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg---~i~vw~~~~~ 408 (419)
...+..++|||||++|++++.+ ....|++||+.++++..+..+. .+.+++|+|||++|++++.|+ .|++|++.++
T Consensus 310 ~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~ 388 (415)
T 2hqs_A 310 GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR 388 (415)
T ss_dssp SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC
T ss_pred CCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCC
Confidence 3457889999999999888753 1268999999999887665554 899999999999999988877 7999999988
Q ss_pred eEEecCCC
Q 014755 409 YCVSNPLP 416 (419)
Q Consensus 409 ~~~~~~~~ 416 (419)
...+++..
T Consensus 389 ~~~~l~~~ 396 (415)
T 2hqs_A 389 FKARLPAT 396 (415)
T ss_dssp CEEECCCS
T ss_pred cEEEeeCC
Confidence 87777653
No 129
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=100.00 E-value=1.2e-30 Score=239.54 Aligned_cols=298 Identities=10% Similarity=0.037 Sum_probs=229.6
Q ss_pred CeEEcCCCCEEEEEe-CCeEEEEec--CCCcEEEEeecCcceeEEEEec----CCCeEEEEeccCCeEEEEEccCCccee
Q 014755 12 PSCFSPNARYIAVAV-DYRLVVRDA--HSFKVVQLFSCLDKISYIEWAL----DSEYILCGLYKRLMIQAWSLTQPEWTC 84 (419)
Q Consensus 12 ~~~~s~d~~~la~~~-~~~i~i~~~--~~~~~~~~~~~~~~v~~~~~s~----~~~~l~~~~~~~g~i~iw~~~~~~~~~ 84 (419)
.++|||||++|++++ ++.|.+||+ .+++++..+.+...+..++|+| ||++|++++..+++|.+||..+++.+.
T Consensus 183 ~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~ 262 (543)
T 1nir_A 183 ISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQ 262 (543)
T ss_dssp EEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEE
T ss_pred eEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccce
Confidence 378999999999998 889999999 8888888888777889999999 999999998756899999999998887
Q ss_pred eeecC----------C-ccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE--eccCCCCeeeEEEccCCCEEEEEe
Q 014755 85 KIDEG----------L-AGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH--VQSPKHASKGVAFTQDGKFAAICT 151 (419)
Q Consensus 85 ~~~~~----------~-~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~ 151 (419)
.+..+ . ..+..+.++|++..+++...+.+.|.+||+.+.+... ...+...+..+.|+|+++++++++
T Consensus 263 ~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~ 342 (543)
T 1nir_A 263 IVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAA 342 (543)
T ss_dssp EEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEE
T ss_pred eecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEe
Confidence 77542 2 2688999999888877776655699999998754322 223456678999999999888776
Q ss_pred ecCCCCeEEEEeccCCeEEEEEec----cccceeeeeECCCCCeEEEEcCCCCceEEEEcC-C-------CceEEEEeec
Q 014755 152 RRDCKDYINLLSCHTWEIMGVFAV----DTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-D-------GRCLLKYQAY 219 (419)
Q Consensus 152 ~~~~~g~v~i~d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~-------~~~~~~~~~~ 219 (419)
.. .++|.+||+.+++++..+.. |......+ ++|++..+++.....+++|.+||. + .+.++.+..+
T Consensus 343 ~~--~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~ 419 (543)
T 1nir_A 343 NN--SNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQ 419 (543)
T ss_dssp GG--GTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECS
T ss_pred cC--CCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcC
Confidence 53 37999999999999888775 33323333 467755554433335799999999 5 7888998877
Q ss_pred CCCCceeEEEEccCCCeEEEEE-------ecCcEEEEEcCCceee-eeecccccccCCCccceeccCCCcccccceeeec
Q 014755 220 ESGLGVKSISWSPCGQFLAVGS-------YDQTLRVLNHLTWKTF-AEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCL 291 (419)
Q Consensus 220 ~~~~~v~~~~~s~~~~~l~~~~-------~d~~i~v~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (419)
.. .+..++++|++++|++++ .+++|.|||+.+++.. ..+.-.. +..
T Consensus 420 g~--~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~----------~~~-------------- 473 (543)
T 1nir_A 420 GG--GSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAE----------WAD-------------- 473 (543)
T ss_dssp CS--CCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHH----------HHC--------------
T ss_pred CC--CceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechh----------hcc--------------
Confidence 65 688899999999999987 3779999999988765 3321000 000
Q ss_pred cCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecC---CCCceEEEeeccCCC
Q 014755 292 NDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRND---SMPTTLWIWDICRQE 368 (419)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~---d~~~~i~iwd~~~~~ 368 (419)
+..+...+..++|+|+|+.++++.. +.++.|.|||..+++
T Consensus 474 -------------------------------------~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~ 516 (543)
T 1nir_A 474 -------------------------------------LGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK 516 (543)
T ss_dssp -------------------------------------CCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred -------------------------------------cCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCce
Confidence 1124556889999999999887632 123999999999999
Q ss_pred ceeeccc
Q 014755 369 PAAILVQ 375 (419)
Q Consensus 369 ~~~~~~~ 375 (419)
++..+..
T Consensus 517 ~~~~i~~ 523 (543)
T 1nir_A 517 LKAVVKD 523 (543)
T ss_dssp EEEEECC
T ss_pred EEEeecC
Confidence 9887753
No 130
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-32 Score=237.20 Aligned_cols=227 Identities=11% Similarity=0.028 Sum_probs=178.7
Q ss_pred ECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEecc---------CC
Q 014755 98 WSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCH---------TW 167 (419)
Q Consensus 98 ~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~---------~~ 167 (419)
+.+++..+++++.|+ .|++||+++++.+. +. ...+.++.++|+ +++++.| +.|++|+.. ++
T Consensus 44 ~~~d~~~l~sg~~Dg-~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D---~~i~~w~~~~~~~~~~~~~~ 114 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDG-ALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPC---NRLLLLYPGNQITILDSKTN 114 (343)
T ss_dssp SSEEEEEEEEEEETT-EEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECST---TEEEEEETTTEEEEEETTTC
T ss_pred hcCCCCEEEEECCCC-cEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCC---CeEEEEEccCceEEeecCCc
Confidence 456788999999998 99999999987766 33 456778888888 8888876 899999665 45
Q ss_pred eEEEEEe-ccccceeeeeECC--CCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEec
Q 014755 168 EIMGVFA-VDTLDLADIEWSP--DDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYD 243 (419)
Q Consensus 168 ~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 243 (419)
+.+..+. .|...|.+++|+| +++++++ ++.|+.|++||+ +++.+.....+ +...+.+++|+|++++|++|+.|
T Consensus 115 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s--~s~dg~i~~wd~~~~~~~~~~~~~-~~~~i~~~~~~pdg~~lasg~~d 191 (343)
T 3lrv_A 115 KVLREIEVDSANEIIYMYGHNEVNTEYFIW--ADNRGTIGFQSYEDDSQYIVHSAK-SDVEYSSGVLHKDSLLLALYSPD 191 (343)
T ss_dssp CEEEEEECCCSSCEEEEECCC---CCEEEE--EETTCCEEEEESSSSCEEEEECCC-SSCCCCEEEECTTSCEEEEECTT
T ss_pred ceeEEeecCCCCCEEEEEcCCCCCCCEEEE--EeCCCcEEEEECCCCcEEEEEecC-CCCceEEEEECCCCCEEEEEcCC
Confidence 5444444 5667899999999 9999998 667999999999 66665554333 22369999999999999999999
Q ss_pred CcEEEEEcCCceee-eeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCC
Q 014755 244 QTLRVLNHLTWKTF-AEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPF 322 (419)
Q Consensus 244 ~~i~v~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (419)
+.|++||+++++.+ ..+.
T Consensus 192 g~i~iwd~~~~~~~~~~~~------------------------------------------------------------- 210 (343)
T 3lrv_A 192 GILDVYNLSSPDQASSRFP------------------------------------------------------------- 210 (343)
T ss_dssp SCEEEEESSCTTSCCEECC-------------------------------------------------------------
T ss_pred CEEEEEECCCCCCCccEEe-------------------------------------------------------------
Confidence 99999999987655 3332
Q ss_pred CCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc----cCCCee--EEEeCCCCCeEEEEeC
Q 014755 323 QKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV----QKDPIR--AATWDPTCTRLVLCTG 396 (419)
Q Consensus 323 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~----~~~~v~--~~~~s~~~~~l~s~~~ 396 (419)
.+|...|++++|+|+|.+|++++ + +.|++||+++++....+. |...+. +++|+|+|++|++++.
T Consensus 211 -------~~h~~~v~~l~fs~~g~~l~s~~-~--~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 211 -------VDEEAKIKEVKFADNGYWMVVEC-D--QTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp -------CCTTSCEEEEEECTTSSEEEEEE-S--SBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEET
T ss_pred -------ccCCCCEEEEEEeCCCCEEEEEe-C--CeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecC
Confidence 02778899999999999999999 5 799999999987654432 334444 6999999999999998
Q ss_pred -CCcEEEeecCC
Q 014755 397 -SSHLYMWTPSG 407 (419)
Q Consensus 397 -dg~i~vw~~~~ 407 (419)
|+.+++|+++.
T Consensus 281 ~d~~i~v~~~~~ 292 (343)
T 3lrv_A 281 ESNSLTIYKFDK 292 (343)
T ss_dssp TTTEEEEEEECT
T ss_pred CCCcEEEEEEcc
Confidence 99999999964
No 131
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=100.00 E-value=1.3e-30 Score=249.39 Aligned_cols=318 Identities=12% Similarity=0.064 Sum_probs=228.2
Q ss_pred CeEEcCCCCEEEEEeCCeEEEEecCCCcE--EEEeecC-----------------cceeEEEEecCCCeEEEEeccCCeE
Q 014755 12 PSCFSPNARYIAVAVDYRLVVRDAHSFKV--VQLFSCL-----------------DKISYIEWALDSEYILCGLYKRLMI 72 (419)
Q Consensus 12 ~~~~s~d~~~la~~~~~~i~i~~~~~~~~--~~~~~~~-----------------~~v~~~~~s~~~~~l~~~~~~~g~i 72 (419)
.+.|+ |+.+++++++.| +||+.+++. ..++.+. ..|.+++|||| +.++++. + +.|
T Consensus 30 ~~~w~--g~~~~~~~~~~i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~-~-~~i 103 (706)
T 2z3z_A 30 GLQWM--GDNYVFIEGDDL-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT-Q-GGL 103 (706)
T ss_dssp TCEEE--TTEEEEEETTEE-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE-T-TEE
T ss_pred CCcCc--CCeEEEEeCCcE-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE-C-CEE
Confidence 37888 566666664448 999999988 5555543 46999999999 7777665 4 799
Q ss_pred EEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC-----CeEEEeccCCCC-------------
Q 014755 73 QAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN-----TACVHVQSPKHA------------- 134 (419)
Q Consensus 73 ~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~-----~~~~~~~~~~~~------------- 134 (419)
++||+.+++.. .+..+...+.+++|+|||+.|+++ .++ .|++||+.+ ++...+......
T Consensus 104 ~~~d~~~~~~~-~l~~~~~~~~~~~~SpdG~~la~~-~~~-~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~ 180 (706)
T 2z3z_A 104 VGFDMLARKVT-YLFDTNEETASLDFSPVGDRVAYV-RNH-NLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREF 180 (706)
T ss_dssp EEEETTTTEEE-EEECCTTCCTTCEECTTSSEEEEE-ETT-EEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCT
T ss_pred EEEECCCCceE-EccCCcccccCCcCCCCCCEEEEE-ECC-eEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhc
Confidence 99999888654 455667778999999999999996 445 999999998 877763332222
Q ss_pred --eeeEEEccCCCEEEEEeecC------------------------------CCCeEEEEeccCCeEEEEEe--ccccce
Q 014755 135 --SKGVAFTQDGKFAAICTRRD------------------------------CKDYINLLSCHTWEIMGVFA--VDTLDL 180 (419)
Q Consensus 135 --~~~~~~~~~~~~l~~~~~~~------------------------------~~g~v~i~d~~~~~~~~~~~--~~~~~v 180 (419)
+.++.|+|||++|++++.+. ....|++||+.+++...... .+...+
T Consensus 181 ~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 260 (706)
T 2z3z_A 181 GIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFL 260 (706)
T ss_dssp TCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEE
T ss_pred CCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeE
Confidence 48999999999999987321 23579999999887655442 355678
Q ss_pred eeeeECCCCCeEEEEcCC---CCceEEEEcC-CCceEEEEeecCCCC---ceeEEEEcc--CCCeEEEEEecCcEEEEEc
Q 014755 181 ADIEWSPDDSAIVIWDSP---LEYKVLIYSP-DGRCLLKYQAYESGL---GVKSISWSP--CGQFLAVGSYDQTLRVLNH 251 (419)
Q Consensus 181 ~~~~~~~~~~~l~~~~~~---~~~~i~~~d~-~~~~~~~~~~~~~~~---~v~~~~~s~--~~~~l~~~~~d~~i~v~d~ 251 (419)
..++|+|||+.+++.... ....|++||+ +++....+....... .+.+++|+| +|+++++++.|+.+++|.+
T Consensus 261 ~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~ 340 (706)
T 2z3z_A 261 TNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLY 340 (706)
T ss_dssp EEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEE
T ss_pred eeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEE
Confidence 999999999988873321 1248999999 663444443222211 246789999 9999999989999999987
Q ss_pred C-CceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCC
Q 014755 252 L-TWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKP 330 (419)
Q Consensus 252 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (419)
. +++.+..+.
T Consensus 341 ~~~~~~~~~l~--------------------------------------------------------------------- 351 (706)
T 2z3z_A 341 DTTGRLIRQVT--------------------------------------------------------------------- 351 (706)
T ss_dssp ETTSCEEEECC---------------------------------------------------------------------
T ss_pred ECCCCEEEecC---------------------------------------------------------------------
Confidence 5 444444332
Q ss_pred CCCcceEE-EEEccCCeEEEEecCCCCc----eEEEeeccCCCceeecccCCCeeEEEeCCCCCeEEEEeCC----CcEE
Q 014755 331 NPKQGIGL-MSWSSDSQYICTRNDSMPT----TLWIWDICRQEPAAILVQKDPIRAATWDPTCTRLVLCTGS----SHLY 401 (419)
Q Consensus 331 ~~~~~v~~-~~~s~~g~~l~~~~~d~~~----~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d----g~i~ 401 (419)
.+...+.. ++|+|||+.|++++.+ ++ .|+.||+.+++.. .+.|...+.+++|+|||++|+..+.+ +.|+
T Consensus 352 ~~~~~v~~~~~~spdg~~l~~~~~~-~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~ 429 (706)
T 2z3z_A 352 KGEWEVTNFAGFDPKGTRLYFESTE-ASPLERHFYCIDIKGGKTK-DLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVT 429 (706)
T ss_dssp CSSSCEEEEEEECTTSSEEEEEESS-SCTTCBEEEEEETTCCCCE-ESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEE
T ss_pred CCCeEEEeeeEEcCCCCEEEEEecC-CCCceEEEEEEEcCCCCce-eccCCCceEEEEECCCCCEEEEEecCCCCCcEEE
Confidence 13334555 7999999887666543 13 6777888777644 44477789999999999988776443 4699
Q ss_pred EeecCCCe
Q 014755 402 MWTPSGAY 409 (419)
Q Consensus 402 vw~~~~~~ 409 (419)
+||+.+++
T Consensus 430 l~d~~~~~ 437 (706)
T 2z3z_A 430 VTNIGKGS 437 (706)
T ss_dssp EEESSSCE
T ss_pred EEECCCCe
Confidence 99999876
No 132
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=100.00 E-value=1.2e-30 Score=259.19 Aligned_cols=355 Identities=10% Similarity=0.023 Sum_probs=256.9
Q ss_pred eEEcCCCCEEEEEeCCeEEEEecCCCcEEEEee-----------cCcceeEEEEe-cCCCeEEEEeccCCeEEEEEccCC
Q 014755 13 SCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFS-----------CLDKISYIEWA-LDSEYILCGLYKRLMIQAWSLTQP 80 (419)
Q Consensus 13 ~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~-----------~~~~v~~~~~s-~~~~~l~~~~~~~g~i~iw~~~~~ 80 (419)
++|||||++||++.++.|++|++.+.++..... |...+.+++|| |||++|++++ + +.+.+|++.++
T Consensus 250 ~~~SpDG~~la~~~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~-~~i~~~~~~~~ 327 (1045)
T 1k32_A 250 RHLNTDGRRILFSKGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-R-GQAFIQDVSGT 327 (1045)
T ss_dssp EEEEESSSCEEEEETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-T-TEEEEECTTSS
T ss_pred eeEcCCCCEEEEEeCCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-c-CEEEEEcCCCC
Confidence 689999999999999999999996555442222 23479999999 9999999988 4 79999999887
Q ss_pred cceeeeecCCc-cEeEEEECCCCCEEEEEecCCCeEE-EEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCe
Q 014755 81 EWTCKIDEGLA-GIAYARWSPDSRHILTTSDFQLRLT-VWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDY 158 (419)
Q Consensus 81 ~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~~~~~i~-iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~ 158 (419)
+.. .+..+.. .+..++|+ ||+.+++++.+. .+. +|++.+++...+..+...+..++|+|||++|++++.+ +.
T Consensus 328 ~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~-~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~---~~ 401 (1045)
T 1k32_A 328 YVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREG-DFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDR---FE 401 (1045)
T ss_dssp BEE-ECSCCSCEEEEEECSS-SEEEEEEEETTE-EEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETT---SE
T ss_pred ceE-EccCCCcceEEeeeEc-CCCeEEEEECCC-ceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCC---Ce
Confidence 644 4666777 89999999 999999998855 888 9999998877766777788999999999999998876 79
Q ss_pred EEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcC--------CCCceEEEEcCCCceEEEEeecCCCCceeEEEE
Q 014755 159 INLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDS--------PLEYKVLIYSPDGRCLLKYQAYESGLGVKSISW 230 (419)
Q Consensus 159 v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~ 230 (419)
|++||+.+++.......|...+..++|+|||+++++... ..++.|++||+.+.....+..+.. .+..++|
T Consensus 402 v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~--~~~~~~~ 479 (1045)
T 1k32_A 402 IMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENS--HDYAPAF 479 (1045)
T ss_dssp EEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSS--BEEEEEE
T ss_pred EEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCc--ccCCceE
Confidence 999999999988888788888999999999999987432 123689999994444555655544 6889999
Q ss_pred ccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccc--cccccCCceE
Q 014755 231 SPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQG--NSDATNGHIK 308 (419)
Q Consensus 231 s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 308 (419)
+|||++|++++.++...+|+......... +.. ....+.+....... ......+...
T Consensus 480 spdG~~l~~~s~~~~~~~~~~~~~~~~~~--~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (1045)
T 1k32_A 480 DADSKNLYYLSYRSLDPSPDRVVLNFSFE--VVS--------------------KPFVIPLIPGSPNPTKLVPRSMTSEA 537 (1045)
T ss_dssp CTTSCEEEEEESCCCCCEECSSSSCEECC--SCB--------------------EEEEEESSTTCCCGGGCCCGGGSCCC
T ss_pred cCCCCEEEEEecccCCcCcchhccccccc--cCc--------------------eeEEEEeCCCCCCccccCcCcccccc
Confidence 99999999999988888898654322110 000 00011111000000 0000000000
Q ss_pred EEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEE-----------ecCCCCceEEEeeccCCCceeecccCC
Q 014755 309 VRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICT-----------RNDSMPTTLWIWDICRQEPAAILVQKD 377 (419)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~-----------~~~d~~~~i~iwd~~~~~~~~~~~~~~ 377 (419)
..+++... ......+..|.+.+..++++|||+++++ .+.+.+..|++||+.+++...+. .
T Consensus 538 ~~~d~~g~------~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~l~---~ 608 (1045)
T 1k32_A 538 GEYDLNDM------YKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVK---N 608 (1045)
T ss_dssp CCCCCTTG------GGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEEE---E
T ss_pred ccccccCH------hHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEEEee---c
Confidence 00110000 0011223346677999999999998875 12222378999999998865554 6
Q ss_pred CeeEEEeCCCCCeEEEEeCCCcEEEeecCCCe
Q 014755 378 PIRAATWDPTCTRLVLCTGSSHLYMWTPSGAY 409 (419)
Q Consensus 378 ~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~ 409 (419)
.+.+++|||||+.|++++.| .|++|++.+++
T Consensus 609 ~v~~~~~S~DG~~l~~~~~~-~i~~~d~~~~~ 639 (1045)
T 1k32_A 609 NLTDLRLSADRKTVMVRKDD-GKIYTFPLEKP 639 (1045)
T ss_dssp EEEEEEECTTSCEEEEEETT-SCEEEEESSCT
T ss_pred CcceEEECCCCCEEEEEcCC-cEEEEeCccCc
Confidence 68899999999999998876 89999998776
No 133
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=6.9e-32 Score=239.44 Aligned_cols=249 Identities=9% Similarity=0.062 Sum_probs=176.7
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEE------eecCcceeEEEEec--------CCCeEEEEeccCCeEEEEEc
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQL------FSCLDKISYIEWAL--------DSEYILCGLYKRLMIQAWSL 77 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~------~~~~~~v~~~~~s~--------~~~~l~~~~~~~g~i~iw~~ 77 (419)
..+++++++||+++ |++|+|||..+++.... .+|.+.|.+++|+| |+++||+++.| ++|+|||+
T Consensus 95 ~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D-~tv~~Wd~ 173 (393)
T 4gq1_A 95 NSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDD-CTLIIWRL 173 (393)
T ss_dssp --CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETT-SEEEEEEE
T ss_pred eecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECC-CeEEEEEC
Confidence 44567788999998 88999999998876542 24999999999998 88999999976 89999999
Q ss_pred cCCcceeeeecCCccEeEEEECCCCC-EEEEEecCCCeEEEEEcCCCeEEE--------------------------ecc
Q 014755 78 TQPEWTCKIDEGLAGIAYARWSPDSR-HILTTSDFQLRLTVWSLLNTACVH--------------------------VQS 130 (419)
Q Consensus 78 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~~i~iwd~~~~~~~~--------------------------~~~ 130 (419)
.++.....+..|..++.+++|+|++. +|++++.|+ .|++||+++++... ...
T Consensus 174 ~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~-~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 252 (393)
T 4gq1_A 174 TDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNG-NIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSG 252 (393)
T ss_dssp ETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTS-EEEEEETTCCC----------CSCCCSEEEESGGGC------C
T ss_pred CCCceeeeecCCCCCcEEEEECCCCCceEEecCCCC-EEEEEECCCCcccccccccCCcccceEEecccccceeeeeccc
Confidence 99888888889999999999999875 688888887 99999998865432 123
Q ss_pred CCCCeeeEEEc-cCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCC
Q 014755 131 PKHASKGVAFT-QDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPD 209 (419)
Q Consensus 131 ~~~~~~~~~~~-~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~ 209 (419)
+...+.++.|+ |+++.+++++.| +.+++||+..++....+..+...+..+.+.|+.+.+..
T Consensus 253 ~~~~v~~v~~~~~dg~~l~s~s~d---~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--------------- 314 (393)
T 4gq1_A 253 IASSLANVRWIGSDGSGILAMCKS---GAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISL--------------- 314 (393)
T ss_dssp CSSSCSEEEEETTTTCEEEEECTT---SEEEEEEC-------------------CCSCSEEEECS---------------
T ss_pred ccccceeeeeecCCCCEEEEEeCC---CCEEEEECccCCCCceEeeecCccccEEEccccccccc---------------
Confidence 45567788886 899999999887 89999999988887777777777777777666543321
Q ss_pred CceEEEEeecCCCCceeEEEEcc--CCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccce
Q 014755 210 GRCLLKYQAYESGLGVKSISWSP--CGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMS 287 (419)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (419)
.. ......++| ++.++++|+.||+|++||+.+++++..+.
T Consensus 315 ---------~~---~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~-------------------------- 356 (393)
T 4gq1_A 315 ---------FP---SLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPI-------------------------- 356 (393)
T ss_dssp ---------SC---CSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEE--------------------------
T ss_pred ---------cC---cceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEec--------------------------
Confidence 11 122233444 44567788889999999998877655432
Q ss_pred eeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeecc
Q 014755 288 ELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDIC 365 (419)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~ 365 (419)
.|...|.+++|||||++||+++++ .+.+|.+.
T Consensus 357 -------------------------------------------~~~~~V~svafspdG~~LA~as~~---Gv~lvrL~ 388 (393)
T 4gq1_A 357 -------------------------------------------QLGMPIVDFCWHQDGSHLAIATEG---SVLLTRLM 388 (393)
T ss_dssp -------------------------------------------ECSSCEEEEEECTTSSEEEEEESS---EEEEEEEG
T ss_pred -------------------------------------------CCCCcEEEEEEcCCCCEEEEEeCC---CeEEEEEe
Confidence 256679999999999999999975 46666553
No 134
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=100.00 E-value=7.6e-31 Score=251.88 Aligned_cols=324 Identities=10% Similarity=0.115 Sum_probs=227.3
Q ss_pred cCeEEcCCCCEEEEEeCCeEEEEecCCCcEEEEeecCc----ceeEEEEecCCCeEEEEecc--------CCeEEEEEcc
Q 014755 11 GPSCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFSCLD----KISYIEWALDSEYILCGLYK--------RLMIQAWSLT 78 (419)
Q Consensus 11 ~~~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~~~~----~v~~~~~s~~~~~l~~~~~~--------~g~i~iw~~~ 78 (419)
..++|||||++++++.+++|++||+.+++....+.+.. .|.+++|||||++|++++.+ ++.+++||+.
T Consensus 20 ~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~ 99 (723)
T 1xfd_A 20 PEAKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIP 99 (723)
T ss_dssp CCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESS
T ss_pred cccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECC
Confidence 34899999998887558899999999999888776443 39999999999999999753 2689999999
Q ss_pred CCcceeeeec---CCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEec-cCCCCe------------------e
Q 014755 79 QPEWTCKIDE---GLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQ-SPKHAS------------------K 136 (419)
Q Consensus 79 ~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~-~~~~~~------------------~ 136 (419)
+++. ..+.. +...+..++|||||+.|++++. + .|++||+.+++...+. .+...+ .
T Consensus 100 ~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~-~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~ 176 (723)
T 1xfd_A 100 HGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-N-NIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHI 176 (723)
T ss_dssp SCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-T-EEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSE
T ss_pred CCce-EeccCCccccccccccEECCCCCEEEEEEC-C-eEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcc
Confidence 8876 33432 3344889999999999999987 4 8999999998777633 223222 6
Q ss_pred eEEEccCCCEEEEEeecCC-------------------------------CCeEEEEeccCCeEEEEEecc------ccc
Q 014755 137 GVAFTQDGKFAAICTRRDC-------------------------------KDYINLLSCHTWEIMGVFAVD------TLD 179 (419)
Q Consensus 137 ~~~~~~~~~~l~~~~~~~~-------------------------------~g~v~i~d~~~~~~~~~~~~~------~~~ 179 (419)
+++|+|||++|++++.++. ...|++||+.+++....+..+ ...
T Consensus 177 ~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~ 256 (723)
T 1xfd_A 177 AHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYY 256 (723)
T ss_dssp EEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEE
T ss_pred eEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccce
Confidence 8999999999999886521 127999999988765555543 567
Q ss_pred eeeeeECCCCCeEEEEcC--CCCceEEEEcC-CCceEEEEeecCCCCce----eEEEEccCCCeEEEE--EecC------
Q 014755 180 LADIEWSPDDSAIVIWDS--PLEYKVLIYSP-DGRCLLKYQAYESGLGV----KSISWSPCGQFLAVG--SYDQ------ 244 (419)
Q Consensus 180 v~~~~~~~~~~~l~~~~~--~~~~~i~~~d~-~~~~~~~~~~~~~~~~v----~~~~~s~~~~~l~~~--~~d~------ 244 (419)
+..++|+|||+.++.+.. ..+..|++||+ +++....+..+.. ..+ ..++|+|||+.|+.. ..++
T Consensus 257 ~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 335 (723)
T 1xfd_A 257 ITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESE-AWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFY 335 (723)
T ss_dssp EEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECS-SCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEE
T ss_pred eEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccC-CEEeccCCCceEcCCCCeEEEEEecccCCCccee
Confidence 899999999998866422 23468999999 6666555543321 133 378999999988764 3455
Q ss_pred cEEEEEc-CCcee--eeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCC
Q 014755 245 TLRVLNH-LTWKT--FAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLP 321 (419)
Q Consensus 245 ~i~v~d~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (419)
.|++||+ .+++. ...+.
T Consensus 336 ~l~~~d~~~~~~~~~~~~l~------------------------------------------------------------ 355 (723)
T 1xfd_A 336 HITVSSSQPNSSNDNIQSIT------------------------------------------------------------ 355 (723)
T ss_dssp EEEEECSSCCSSSCCCCBSC------------------------------------------------------------
T ss_pred EEEEEeccCCCCccceeEee------------------------------------------------------------
Confidence 4666663 33220 22211
Q ss_pred CCCCCCCCCCCCcceE-EEEEccCCeEEEEecCC-CCceEEEeeccCC---Cceeecc---cCCCeeEEEeCCCCCeEEE
Q 014755 322 FQKPPTDKPNPKQGIG-LMSWSSDSQYICTRNDS-MPTTLWIWDICRQ---EPAAILV---QKDPIRAATWDPTCTRLVL 393 (419)
Q Consensus 322 ~~~~~~~~~~~~~~v~-~~~~s~~g~~l~~~~~d-~~~~i~iwd~~~~---~~~~~~~---~~~~v~~~~~s~~~~~l~s 393 (419)
.+...+. .++|||||+.|+..+.+ ..+.++||++... +...+.. |...+..++|+|||++|+.
T Consensus 356 ---------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~ 426 (723)
T 1xfd_A 356 ---------SGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLL 426 (723)
T ss_dssp ---------CSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEE
T ss_pred ---------cCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEE
Confidence 0111233 46999999999876553 1267889988643 2222222 5777999999999998776
Q ss_pred EeC-CC--cEEEeecCC
Q 014755 394 CTG-SS--HLYMWTPSG 407 (419)
Q Consensus 394 ~~~-dg--~i~vw~~~~ 407 (419)
... .. ...+++...
T Consensus 427 ~~~~~~~p~~~~~~~~~ 443 (723)
T 1xfd_A 427 KCEGPGVPMVTVHNTTD 443 (723)
T ss_dssp ECCSSSSCCEEEEETTT
T ss_pred EccCCCCCeEEEEECCC
Confidence 533 22 234455543
No 135
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=100.00 E-value=4.9e-29 Score=216.42 Aligned_cols=237 Identities=13% Similarity=0.126 Sum_probs=178.8
Q ss_pred eEEcCCCCEEEEEe--CCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcc-eeeeec
Q 014755 13 SCFSPNARYIAVAV--DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEW-TCKIDE 88 (419)
Q Consensus 13 ~~~s~d~~~la~~~--~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~-~~~~~~ 88 (419)
..|+++++++++.. ++.|.+||..+++....+. +...+ .++|+|+|+++++++..++.|.+||+.+++. ...+..
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc
Confidence 45777777755553 7889999999999887665 44556 9999999998888877557999999999987 666666
Q ss_pred CCccEeEEEECCCCCEEEEEecCCC--eEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCe-EEEEecc
Q 014755 89 GLAGIAYARWSPDSRHILTTSDFQL--RLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDY-INLLSCH 165 (419)
Q Consensus 89 ~~~~v~~~~~~~~~~~l~~~~~~~~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~-v~i~d~~ 165 (419)
+..+..+++|+|+++++++...+++ .|.+||+++++.+..........+++|+|+|++++++..+ .+. |.+|++.
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~--~~~~i~~~~~~ 159 (331)
T 3u4y_A 82 GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRS--SANTVRRFKID 159 (331)
T ss_dssp CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEET--TTTEEEEEEEC
T ss_pred CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecC--CCceEEEEEEC
Confidence 6666555999999999995444334 8999999999888744455667999999999987777654 256 9999987
Q ss_pred CCeEE----EEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCce---EEEEeecCCCCceeEEEEccCCCeE
Q 014755 166 TWEIM----GVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRC---LLKYQAYESGLGVKSISWSPCGQFL 237 (419)
Q Consensus 166 ~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~---~~~~~~~~~~~~v~~~~~s~~~~~l 237 (419)
....+ ............++|+|+|+++++.+ ..++.|++||+ +++. +..+.... .+..++|+|+|+++
T Consensus 160 ~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~-~~~~~v~v~d~~~~~~~~~~~~~~~~~---~~~~~~~spdg~~l 235 (331)
T 3u4y_A 160 ADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVAN-LIGNSIGILETQNPENITLLNAVGTNN---LPGTIVVSRDGSTV 235 (331)
T ss_dssp TTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEE-TTTTEEEEEECSSTTSCEEEEEEECSS---CCCCEEECTTSSEE
T ss_pred CCCcEeecCCccccCCCCccceEECCCCCEEEEEe-CCCCeEEEEECCCCcccceeeeccCCC---CCceEEECCCCCEE
Confidence 53322 11223345678999999999777643 44789999999 7777 66665432 68899999999977
Q ss_pred EEEE-ecCcEEEEEcCCcee
Q 014755 238 AVGS-YDQTLRVLNHLTWKT 256 (419)
Q Consensus 238 ~~~~-~d~~i~v~d~~~~~~ 256 (419)
+++. .++.|.+||+.+++.
T Consensus 236 ~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 236 YVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp EEECSSEEEEEEEETTTTEE
T ss_pred EEEEcCCCEEEEEECCCCce
Confidence 6665 467899999998876
No 136
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.97 E-value=2.1e-28 Score=212.51 Aligned_cols=286 Identities=16% Similarity=0.161 Sum_probs=203.3
Q ss_pred EEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeE-EE-ecc
Q 014755 53 IEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTAC-VH-VQS 130 (419)
Q Consensus 53 ~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~-~~-~~~ 130 (419)
..|.++++++++....++.|.+||+.+++....+..+...+ .++|+|+++++++++...+.|.+||+.+++. .. +..
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc
Confidence 45677777766555555899999999999887777666667 9999999998888877445999999999886 44 444
Q ss_pred CCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCce-EEEEcC-
Q 014755 131 PKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYK-VLIYSP- 208 (419)
Q Consensus 131 ~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~-i~~~d~- 208 (419)
+.....+++|+|+++++++...++..+.|.+||+.+++.+..+..+ ....+++|+|+|+++++.+.. ++. +.+|++
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~-~~~~i~~~~~~ 159 (331)
T 3u4y_A 82 GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRS-SANTVRRFKID 159 (331)
T ss_dssp CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEET-TTTEEEEEEEC
T ss_pred CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecC-CCceEEEEEEC
Confidence 4444455999999999994443311128999999999988877654 456899999999988775433 456 999998
Q ss_pred -CCceEEE-EeecCCCCceeEEEEccCCCeEEEEE-ecCcEEEEEcCCcee---eeeecccccccCCCccceeccCCCcc
Q 014755 209 -DGRCLLK-YQAYESGLGVKSISWSPCGQFLAVGS-YDQTLRVLNHLTWKT---FAEFMHLSTVRGPCFPAVFKEVDEPL 282 (419)
Q Consensus 209 -~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~v~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (419)
.+..... .........+..++|+|+|+++++++ .++.|++||+.+++. +..+..
T Consensus 160 ~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-------------------- 219 (331)
T 3u4y_A 160 ADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT-------------------- 219 (331)
T ss_dssp TTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC--------------------
T ss_pred CCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC--------------------
Confidence 3332211 11111222689999999999766555 578999999998876 443321
Q ss_pred cccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecC-CCCceEEE
Q 014755 283 QLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRND-SMPTTLWI 361 (419)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-d~~~~i~i 361 (419)
...+..++|+|||++++++.. + +.|.+
T Consensus 220 --------------------------------------------------~~~~~~~~~spdg~~l~v~~~~~--~~i~~ 247 (331)
T 3u4y_A 220 --------------------------------------------------NNLPGTIVVSRDGSTVYVLTEST--VDVFN 247 (331)
T ss_dssp --------------------------------------------------SSCCCCEEECTTSSEEEEECSSE--EEEEE
T ss_pred --------------------------------------------------CCCCceEEECCCCCEEEEEEcCC--CEEEE
Confidence 122457899999998776654 4 88999
Q ss_pred eeccCCCce--eecc-----cCC---CeeEEEeCCCCCeEEEEe-CCCcEEEeecCCCeEEec
Q 014755 362 WDICRQEPA--AILV-----QKD---PIRAATWDPTCTRLVLCT-GSSHLYMWTPSGAYCVSN 413 (419)
Q Consensus 362 wd~~~~~~~--~~~~-----~~~---~v~~~~~s~~~~~l~s~~-~dg~i~vw~~~~~~~~~~ 413 (419)
||+.++++. ..+. +.. ....++|+|||++|++++ .++.|.+|++.+...-.+
T Consensus 248 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~ 310 (331)
T 3u4y_A 248 FNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVGYV 310 (331)
T ss_dssp EETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred EECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcccce
Confidence 999998772 2211 122 235689999999886555 467999999997665443
No 137
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.97 E-value=1.4e-28 Score=235.31 Aligned_cols=297 Identities=14% Similarity=0.123 Sum_probs=212.2
Q ss_pred cCeEEcCCCCEEEEEeCCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccC-----Ccceee
Q 014755 11 GPSCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQ-----PEWTCK 85 (419)
Q Consensus 11 ~~~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~-----~~~~~~ 85 (419)
..++|||| ++++++.++.|++||+.+++...+..+...+.+++|||||++|+++. + +.|++|++.+ ++....
T Consensus 85 ~~~~~spd-~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~-~-~~i~v~~~~~~~~~~g~~~~~ 161 (706)
T 2z3z_A 85 FRTLDAGR-GLVVLFTQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVR-N-HNLYIARGGKLGEGMSRAIAV 161 (706)
T ss_dssp EEEEETTT-TEEEEEETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEE-T-TEEEEEECBCTTSCCCCCEES
T ss_pred eeEEECCC-CeEEEEECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEE-C-CeEEEEecCcccccCCCcEEe
Confidence 34899999 88888889999999999998888888888899999999999999964 5 7999999998 776544
Q ss_pred eecCCcc--------------EeEEEECCCCCEEEEEec--------------------------------CCCeEEEEE
Q 014755 86 IDEGLAG--------------IAYARWSPDSRHILTTSD--------------------------------FQLRLTVWS 119 (419)
Q Consensus 86 ~~~~~~~--------------v~~~~~~~~~~~l~~~~~--------------------------------~~~~i~iwd 119 (419)
...+... +.++.|+|||++|++++. ....|++||
T Consensus 162 ~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d 241 (706)
T 2z3z_A 162 TIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYH 241 (706)
T ss_dssp CSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEE
T ss_pred ccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEE
Confidence 4333332 488999999999999872 123799999
Q ss_pred cCCCeEEEec---cCCCCeeeEEEccCCCEEEEEeecCC--CCeEEEEeccCCeEEEEEe-cc-cc---ceeeeeECC--
Q 014755 120 LLNTACVHVQ---SPKHASKGVAFTQDGKFAAICTRRDC--KDYINLLSCHTWEIMGVFA-VD-TL---DLADIEWSP-- 187 (419)
Q Consensus 120 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~--~g~v~i~d~~~~~~~~~~~-~~-~~---~v~~~~~~~-- 187 (419)
+.+++...+. .+...+.+++|+|||++|++++.+.. ...|++||+.+++....+. .. .. .+..+.|+|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~ 321 (706)
T 2z3z_A 242 LATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGS 321 (706)
T ss_dssp TTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTC
T ss_pred CCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCC
Confidence 9999877633 34456789999999999998876521 1389999999984333332 22 21 246789999
Q ss_pred CCCeEEEEcCCCCceEEEEcC--CCceEEEEeecCCCCceeE-EEEccCCCeEEEEEec-C----cEEEEEcCCceeeee
Q 014755 188 DDSAIVIWDSPLEYKVLIYSP--DGRCLLKYQAYESGLGVKS-ISWSPCGQFLAVGSYD-Q----TLRVLNHLTWKTFAE 259 (419)
Q Consensus 188 ~~~~l~~~~~~~~~~i~~~d~--~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~~~~~d-~----~i~v~d~~~~~~~~~ 259 (419)
||+++++ +..++.+.+|.. ++..+..+..+.. .+.. ++|+|+|+.|++++.+ + .|+.||+.+++ ...
T Consensus 322 dg~~l~~--~~~~g~~~l~~~~~~~~~~~~l~~~~~--~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~ 396 (706)
T 2z3z_A 322 NNQFIWQ--SRRDGWNHLYLYDTTGRLIRQVTKGEW--EVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKD 396 (706)
T ss_dssp SSEEEEE--ECTTSSCEEEEEETTSCEEEECCCSSS--CEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEE
T ss_pred CCEEEEE--EccCCccEEEEEECCCCEEEecCCCCe--EEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-cee
Confidence 9998776 344565666654 6777777765443 5766 7999999988776654 3 56666766544 222
Q ss_pred ecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEE
Q 014755 260 FMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLM 339 (419)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 339 (419)
+. |...+.++
T Consensus 397 l~----------------------------------------------------------------------~~~~~~~~ 406 (706)
T 2z3z_A 397 LT----------------------------------------------------------------------PESGMHRT 406 (706)
T ss_dssp SC----------------------------------------------------------------------CSSSEEEE
T ss_pred cc----------------------------------------------------------------------CCCceEEE
Confidence 21 33447889
Q ss_pred EEccCCeEEEEecCC--CCceEEEeeccCCCceeecccCCCeeEEEeCC
Q 014755 340 SWSSDSQYICTRNDS--MPTTLWIWDICRQEPAAILVQKDPIRAATWDP 386 (419)
Q Consensus 340 ~~s~~g~~l~~~~~d--~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~ 386 (419)
+|||||++++....+ .++.|++||+.+++ ...+.+..++....|.+
T Consensus 407 ~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~-~~~~~~~~~~~~~~~~~ 454 (706)
T 2z3z_A 407 QLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS-HTLLEAKNPDTGYAMPE 454 (706)
T ss_dssp EECTTSSEEEEEEECSSCSCEEEEEESSSCE-EEEEECC------CCCC
T ss_pred EECCCCCEEEEEecCCCCCcEEEEEECCCCe-EeeccccchhhhcCCCC
Confidence 999999988876432 23679999999887 44445555555555543
No 138
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.97 E-value=1.5e-27 Score=209.05 Aligned_cols=241 Identities=14% Similarity=0.056 Sum_probs=198.1
Q ss_pred eEEcCCCCEEEEEe--------CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCccee
Q 014755 13 SCFSPNARYIAVAV--------DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTC 84 (419)
Q Consensus 13 ~~~s~d~~~la~~~--------~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~ 84 (419)
++|+|+|++|++++ ++.|.+||..+++.+..+.....+..++|+|+|++++++...++.|.+||+.+++...
T Consensus 46 ~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~ 125 (353)
T 3vgz_A 46 MAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKG 125 (353)
T ss_dssp EEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEE
T ss_pred eEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEE
Confidence 88999999999887 4579999999999998887777789999999999887777666899999999998877
Q ss_pred eeecCCc---------cEeEEEECCCCCEEEEEe-cCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeec
Q 014755 85 KIDEGLA---------GIAYARWSPDSRHILTTS-DFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRR 153 (419)
Q Consensus 85 ~~~~~~~---------~v~~~~~~~~~~~l~~~~-~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~ 153 (419)
.+..+.. .+.+++|+|+++++++++ .+++.|.+||+++++... +......+.+++|+|++++++++..+
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 205 (353)
T 3vgz_A 126 RLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNAD 205 (353)
T ss_dssp EEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTT
T ss_pred EEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCC
Confidence 7765432 278899999999888876 334489999999998887 44356668999999999999998765
Q ss_pred CCCCeEEEEeccCCeEEEEEec----cccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEE
Q 014755 154 DCKDYINLLSCHTWEIMGVFAV----DTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSI 228 (419)
Q Consensus 154 ~~~g~v~i~d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~ 228 (419)
+.|.+||+.+++....+.. +...+..++|+|+++.+++.+ ..++.|.+||. +++.+..+.... ...+
T Consensus 206 ---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~-~~~~~v~~~d~~~~~~~~~~~~~~----~~~~ 277 (353)
T 3vgz_A 206 ---GELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITD-SKAAEVLVVDTRNGNILAKVAAPE----SLAV 277 (353)
T ss_dssp ---SEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEE-SSSSEEEEEETTTCCEEEEEECSS----CCCE
T ss_pred ---CeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEe-CCCCEEEEEECCCCcEEEEEEcCC----CceE
Confidence 7999999999998887765 345578899999999887754 34689999999 788777776432 3579
Q ss_pred EEccCCCeEEEEE-ecCcEEEEEcCCceeeeeec
Q 014755 229 SWSPCGQFLAVGS-YDQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 229 ~~s~~~~~l~~~~-~d~~i~v~d~~~~~~~~~~~ 261 (419)
+|+|+|++++++. .++.|.+||..+++.+..+.
T Consensus 278 ~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~ 311 (353)
T 3vgz_A 278 LFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFD 311 (353)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred EECCCCCEEEEEECCCCeEEEEECCCCeEEEEEe
Confidence 9999999766665 68999999999988776653
No 139
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=8e-29 Score=206.76 Aligned_cols=218 Identities=9% Similarity=0.036 Sum_probs=157.9
Q ss_pred cCcceeEEEEecC----CCeEEEEeccCCeEEEEEccCCcceee-eecCCccEeEEEECCCCCEEEEEecCCCeEEEEEc
Q 014755 46 CLDKISYIEWALD----SEYILCGLYKRLMIQAWSLTQPEWTCK-IDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSL 120 (419)
Q Consensus 46 ~~~~v~~~~~s~~----~~~l~~~~~~~g~i~iw~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~ 120 (419)
+...|.+++|+|| ++.+++++. .+++|++.+++.+.. ..+| ++ .|++|++
T Consensus 110 ~~~~v~sla~spd~~~~~~~l~s~g~---~~~v~~l~~g~lv~ss~~g~---------------------d~-~V~~~~~ 164 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQVLLKSGN---IKAVLGLTKRRLVSSSGTLS---------------------DQ-QVEVMTF 164 (356)
T ss_dssp SEEEEEEECC------CCEEEEEEEE---EEEEEEETTTEEEEEESSST---------------------TC-EEEEEEE
T ss_pred cccceEEEEECCCccccccEEEeCCC---eEEEEecCCCcEEEecccCC---------------------CC-cEEEEEE
Confidence 4468999999999 999999873 578886644443333 1233 33 5666665
Q ss_pred C-CCeEEE-eccCCCCeeeEEEcc---CCCEEEEEeecCCCCeEEEEeccCCeEEEEEecccc---ceeeeeECCCCCeE
Q 014755 121 L-NTACVH-VQSPKHASKGVAFTQ---DGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTL---DLADIEWSPDDSAI 192 (419)
Q Consensus 121 ~-~~~~~~-~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l 192 (419)
. +++.+. +..+...+..++|+| ++.+|++++.| ++|++||+++++.++.+..|.. .+.+++|+|+|+++
T Consensus 165 s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D---~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~l 241 (356)
T 2w18_A 165 AEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIM---NNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLF 241 (356)
T ss_dssp CTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETT---SEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEE
T ss_pred CCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCC---CcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEE
Confidence 2 244433 567888889999999 77999999987 8999999999999999986543 56777999999987
Q ss_pred EE----------EcCCCCceEEEEcC-CCceEEEEe---ecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeee
Q 014755 193 VI----------WDSPLEYKVLIYSP-DGRCLLKYQ---AYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFA 258 (419)
Q Consensus 193 ~~----------~~~~~~~~i~~~d~-~~~~~~~~~---~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~ 258 (419)
++ ..++.|++|++||. +++.+..+. ...+...+.+..+ ++.++++++.|++|+|||+.+++++.
T Consensus 242 vs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~ 319 (356)
T 2w18_A 242 IVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTA 319 (356)
T ss_dssp EEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEE
T ss_pred EEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEE
Confidence 54 33667899999999 777766552 1122223433333 47899999999999999999999998
Q ss_pred eecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcc-eE
Q 014755 259 EFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQG-IG 337 (419)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~ 337 (419)
++. +|... +.
T Consensus 320 tL~---------------------------------------------------------------------gH~~~vvs 330 (356)
T 2w18_A 320 LLP---------------------------------------------------------------------PVSDQHWS 330 (356)
T ss_dssp EEC---------------------------------------------------------------------CC--CCCC
T ss_pred Eec---------------------------------------------------------------------CCCCCeEE
Confidence 875 23333 34
Q ss_pred EEEEccCCeEEEEecCCCCceEEEeec
Q 014755 338 LMSWSSDSQYICTRNDSMPTTLWIWDI 364 (419)
Q Consensus 338 ~~~~s~~g~~l~~~~~d~~~~i~iwd~ 364 (419)
.++|||||++|++|+.| ++|+|||+
T Consensus 331 ~vafSPDG~~LaSGS~D--~TIklWd~ 355 (356)
T 2w18_A 331 FVKWSGTDSHLLAGQKD--GNIFVYHY 355 (356)
T ss_dssp EEEECSSSSEEEEECTT--SCEEEEEE
T ss_pred EEEECCCCCEEEEEECC--CcEEEecC
Confidence 68999999999999999 99999996
No 140
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.97 E-value=3.4e-28 Score=211.64 Aligned_cols=272 Identities=13% Similarity=0.034 Sum_probs=209.8
Q ss_pred CEEEEEe-CCeEEEEecCCCcEEEEeecCc---ceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCC-----
Q 014755 20 RYIAVAV-DYRLVVRDAHSFKVVQLFSCLD---KISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGL----- 90 (419)
Q Consensus 20 ~~la~~~-~~~i~i~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~----- 90 (419)
++|++++ ++.|.+||+.+++.+..+.... .+..++|+|+|+++++++..++.|.+||+.+++.+..+....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 4677776 8899999999999988777555 689999999999887776666899999999998776665321
Q ss_pred ccEeEEEECCCCCEEEEEe------------cCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCe
Q 014755 91 AGIAYARWSPDSRHILTTS------------DFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDY 158 (419)
Q Consensus 91 ~~v~~~~~~~~~~~l~~~~------------~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~ 158 (419)
..+..++|+|+|++++++. .++ .|.+||+.+++..........+.+++|+|++++++++ + +.
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~-~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~---~~ 155 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPT-RVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--G---RD 155 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCC-EEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--S---SS
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCc-eEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--C---Ce
Confidence 2567899999999998885 345 9999999998887743345667899999999988888 2 68
Q ss_pred EEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCc-----------------------eEEEEcC-CCceEE
Q 014755 159 INLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEY-----------------------KVLIYSP-DGRCLL 214 (419)
Q Consensus 159 v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~-----------------------~i~~~d~-~~~~~~ 214 (419)
|++||+.+++....+..+.. ...+.|+|+++.+++.. ..++ .|.+||+ +++..
T Consensus 156 i~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~- 232 (337)
T 1pby_B 156 LHVMDPEAGTLVEDKPIQSW-EAETYAQPDVLAVWNQH-ESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA- 232 (337)
T ss_dssp EEEEETTTTEEEEEECSTTT-TTTTBCCCBCCCCCCCC-TTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-
T ss_pred EEEEECCCCcEeeeeecccc-CCCceeCCCccEEeeec-cCCCceeeeeeccccccccccccccccceEEEeCCCCCce-
Confidence 99999999988877765431 12458899998776522 1122 5789999 55554
Q ss_pred EEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCc
Q 014755 215 KYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDD 294 (419)
Q Consensus 215 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (419)
.+....+...+.+++|+|+|++++++ ++.|++||+.+++.+..+...
T Consensus 233 ~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~------------------------------- 279 (337)
T 1pby_B 233 MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP------------------------------- 279 (337)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-------------------------------
T ss_pred EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-------------------------------
Confidence 43333333368899999999999888 689999999988876655311
Q ss_pred cccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc
Q 014755 295 FIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV 374 (419)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~ 374 (419)
..+.+++|+|+|++|++++.+ +.|++||+.+++.+..+.
T Consensus 280 ---------------------------------------~~~~~~~~s~dg~~l~~~~~~--~~i~v~d~~~~~~~~~~~ 318 (337)
T 1pby_B 280 ---------------------------------------HSYYSVNVSTDGSTVWLGGAL--GDLAAYDAETLEKKGQVD 318 (337)
T ss_dssp ---------------------------------------SCCCEEEECTTSCEEEEESBS--SEEEEEETTTCCEEEEEE
T ss_pred ---------------------------------------CceeeEEECCCCCEEEEEcCC--CcEEEEECcCCcEEEEEE
Confidence 124678999999999988877 999999999998776653
No 141
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.97 E-value=3.6e-29 Score=240.89 Aligned_cols=286 Identities=14% Similarity=0.126 Sum_probs=212.0
Q ss_pred CcceeEEEEecCCCeEEEEeccCC-----eEEEEEccCCcceeeeecCC------------------------ccEeEEE
Q 014755 47 LDKISYIEWALDSEYILCGLYKRL-----MIQAWSLTQPEWTCKIDEGL------------------------AGIAYAR 97 (419)
Q Consensus 47 ~~~v~~~~~s~~~~~l~~~~~~~g-----~i~iw~~~~~~~~~~~~~~~------------------------~~v~~~~ 97 (419)
...+.+++|||||++|++++..++ .|++||+.+++....+..+. ..+.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 456899999999999999987236 89999999998765554433 2378999
Q ss_pred ECCCCCEEEEEecCCCeEEEEEcCCC---eEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEe
Q 014755 98 WSPDSRHILTTSDFQLRLTVWSLLNT---ACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFA 174 (419)
Q Consensus 98 ~~~~~~~l~~~~~~~~~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~ 174 (419)
|+|||++|++++. + .|++||+.++ +...+..+...+..++|+|||++|++++. +.|++||+.+++......
T Consensus 116 ~SpDg~~l~~~~~-~-~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~----~~i~~~d~~~g~~~~~~~ 189 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-G-ELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG----RNLWVIDLASGRQMQLTA 189 (741)
T ss_dssp ECTTSSEEEEEET-T-EEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET----TEEEEEETTTTEEEECCC
T ss_pred ECCCCCEEEEEeC-C-cEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC----CcEEEEecCCCCEEEecc
Confidence 9999999999987 4 9999999998 66667777788999999999999999874 589999999887765544
Q ss_pred ccccc----------------eeeeeECCCCCeEEEEcCCC-------------------------------CceEEEEc
Q 014755 175 VDTLD----------------LADIEWSPDDSAIVIWDSPL-------------------------------EYKVLIYS 207 (419)
Q Consensus 175 ~~~~~----------------v~~~~~~~~~~~l~~~~~~~-------------------------------~~~i~~~d 207 (419)
.+... +..++|+|||+.|++..... ...|++||
T Consensus 190 ~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d 269 (741)
T 2ecf_A 190 DGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVIS 269 (741)
T ss_dssp CCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEEC
T ss_pred CCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEE
Confidence 33322 47899999999998742211 11788999
Q ss_pred C-C-CceEEEEeecCCCCceeEEEEccCCCeEEEEEe-----cCcEEEEEcCCceeeeeecccccccCCCccceeccCCC
Q 014755 208 P-D-GRCLLKYQAYESGLGVKSISWSPCGQFLAVGSY-----DQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDE 280 (419)
Q Consensus 208 ~-~-~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-----d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (419)
+ + ++.........+...+..++| |||++|++++. +..|++||+.+++....+......
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~-------------- 334 (741)
T 2ecf_A 270 PAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPT-------------- 334 (741)
T ss_dssp SSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSS--------------
T ss_pred CCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCC--------------
Confidence 9 4 554333222123347899999 99999998765 567999999988766554311000
Q ss_pred cccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEE
Q 014755 281 PLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLW 360 (419)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~ 360 (419)
....+..++|+|||+++++++.+ +.++
T Consensus 335 ---------------------------------------------------~~~~~~~~~~spdg~~~~~~~~~--g~~~ 361 (741)
T 2ecf_A 335 ---------------------------------------------------WVPLHNSLRFLDDGSILWSSERT--GFQH 361 (741)
T ss_dssp ---------------------------------------------------CCCCCSCCEECTTSCEEEEECTT--SSCE
T ss_pred ---------------------------------------------------cCCcCCceEECCCCeEEEEecCC--CccE
Confidence 00013467999999988888887 8777
Q ss_pred Eeecc-CCCceeecccCCCeeEE-EeCCCCCeEEE-EeCCC--cEEEeecC
Q 014755 361 IWDIC-RQEPAAILVQKDPIRAA-TWDPTCTRLVL-CTGSS--HLYMWTPS 406 (419)
Q Consensus 361 iwd~~-~~~~~~~~~~~~~v~~~-~~s~~~~~l~s-~~~dg--~i~vw~~~ 406 (419)
||.++ .++...+..|...+..+ .|+||++.|+. ++.++ .++||++.
T Consensus 362 l~~~~~~~~~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 362 LYRIDSKGKAAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVP 412 (741)
T ss_dssp EEEECSSSCEEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEE
T ss_pred EEEEcCCCCeeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEE
Confidence 77665 33444444577788887 59999997754 45555 89999986
No 142
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.97 E-value=1.5e-27 Score=208.96 Aligned_cols=279 Identities=6% Similarity=-0.042 Sum_probs=217.6
Q ss_pred EeecCcceeEEEEecCCCeEEEEecc------CCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEE
Q 014755 43 LFSCLDKISYIEWALDSEYILCGLYK------RLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLT 116 (419)
Q Consensus 43 ~~~~~~~v~~~~~s~~~~~l~~~~~~------~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~ 116 (419)
.......+..++|+|+|+++++++.+ ++.|.+||..+++....+.. ...+..++|+|+++++++++..++.|.
T Consensus 36 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~ 114 (353)
T 3vgz_A 36 RKAVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVT 114 (353)
T ss_dssp EEEEESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEE
T ss_pred hhhhccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEE
Confidence 33455678899999999999888744 46899999999988777654 344788999999998887776555999
Q ss_pred EEEcCCCeEEE-eccCCC---------CeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeEC
Q 014755 117 VWSLLNTACVH-VQSPKH---------ASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWS 186 (419)
Q Consensus 117 iwd~~~~~~~~-~~~~~~---------~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~ 186 (419)
+||+++++... +..+.. .+.+++|+|++++++++.... ++.|.+||+.+++.+..+..+...+..++|+
T Consensus 115 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s 193 (353)
T 3vgz_A 115 AIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK-ESVIWVVDGGNIKLKTAIQNTGKMSTGLALD 193 (353)
T ss_dssp EEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS-SCEEEEEETTTTEEEEEECCCCTTCCCCEEE
T ss_pred EEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC-CceEEEEcCCCCceEEEecCCCCccceEEEC
Confidence 99999988766 433321 258899999999888877321 3789999999999988887566668899999
Q ss_pred CCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecC--CCCceeEEEEccCCCeEEEEEe-cCcEEEEEcCCceeeeeecc
Q 014755 187 PDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYE--SGLGVKSISWSPCGQFLAVGSY-DQTLRVLNHLTWKTFAEFMH 262 (419)
Q Consensus 187 ~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~-d~~i~v~d~~~~~~~~~~~~ 262 (419)
|+++.+++. ..++.+.+||. +++.+..+.... ....+.+++|+|+++++++++. ++.|.+||+.+++.+..+..
T Consensus 194 ~dg~~l~~~--~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~ 271 (353)
T 3vgz_A 194 SEGKRLYTT--NADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAA 271 (353)
T ss_dssp TTTTEEEEE--CTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEEC
T ss_pred CCCCEEEEE--cCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEc
Confidence 999999884 45899999999 777776665421 1225788999999998777765 48999999998887666531
Q ss_pred cccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEc
Q 014755 263 LSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWS 342 (419)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 342 (419)
. . ...++|+
T Consensus 272 ~--------------------------------------------------------------------~---~~~~~~s 280 (353)
T 3vgz_A 272 P--------------------------------------------------------------------E---SLAVLFN 280 (353)
T ss_dssp S--------------------------------------------------------------------S---CCCEEEE
T ss_pred C--------------------------------------------------------------------C---CceEEEC
Confidence 1 0 1348999
Q ss_pred cCCeEEEEec-CCCCceEEEeeccCCCceeecccCCCeeEEEeCCCCCeEEEEeCCC
Q 014755 343 SDSQYICTRN-DSMPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCTRLVLCTGSS 398 (419)
Q Consensus 343 ~~g~~l~~~~-~d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg 398 (419)
|+|++++++. .+ +.|.+||+.+++....+.....+.+++|+|||++|+.+..++
T Consensus 281 ~dg~~l~v~~~~~--~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 281 PARNEAYVTHRQA--GKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp TTTTEEEEEETTT--TEEEEEETTTTEEEEEEECCSEEEEEEECTTSCEEEEEEECC
T ss_pred CCCCEEEEEECCC--CeEEEEECCCCeEEEEEecCCCCCeEEEcCCCCEEEEEEccc
Confidence 9999666555 56 999999999999888777667889999999999776666553
No 143
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.97 E-value=2e-27 Score=207.32 Aligned_cols=293 Identities=10% Similarity=0.087 Sum_probs=204.2
Q ss_pred CEEEEE-e-CCeEEEEecC-CC--cEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEcc--CCcc--eeeeecCC
Q 014755 20 RYIAVA-V-DYRLVVRDAH-SF--KVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLT--QPEW--TCKIDEGL 90 (419)
Q Consensus 20 ~~la~~-~-~~~i~i~~~~-~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~--~~~~--~~~~~~~~ 90 (419)
++++++ + ++.|++|++. ++ +.+....+...+.+++|+|+|++|++++.+++.|.+|++. +++. +..+..+
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~- 83 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP- 83 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-
Confidence 445555 4 7899999995 34 3445567888999999999999999988765899999997 5543 2334333
Q ss_pred ccEeEEEECCCCCEEEEEecCCCeEEEEEcC---CCeEEEeccCCCCeeeEEEccCCCEEEEEe-ecCCCCeEEEEeccC
Q 014755 91 AGIAYARWSPDSRHILTTSDFQLRLTVWSLL---NTACVHVQSPKHASKGVAFTQDGKFAAICT-RRDCKDYINLLSCHT 166 (419)
Q Consensus 91 ~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~g~v~i~d~~~ 166 (419)
..+..++|+|+++++++++..++.|.+||+. ..+..........+.+++|+|+++++++++ .+ +.|++||+.+
T Consensus 84 ~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~---~~v~~~d~~~ 160 (343)
T 1ri6_A 84 GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQ---DRICLFTVSD 160 (343)
T ss_dssp SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGG---TEEEEEEECT
T ss_pred CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCC---CEEEEEEecC
Confidence 3789999999999998887655599999994 334444334445688999999999888887 44 7999999987
Q ss_pred -CeEEE----EEec-cccceeeeeECCCCCeEEEEcCCCCceEEEEcCC---Cce--EEEEeec----CCCCceeEEEEc
Q 014755 167 -WEIMG----VFAV-DTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPD---GRC--LLKYQAY----ESGLGVKSISWS 231 (419)
Q Consensus 167 -~~~~~----~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~---~~~--~~~~~~~----~~~~~v~~~~~s 231 (419)
++... .+.. ....+..++|+|+++++++.+ ..++.+.+|+++ ++. ....... .....+..++|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~-~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s 239 (343)
T 1ri6_A 161 DGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVN-ELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHIT 239 (343)
T ss_dssp TSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEE-TTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEEC
T ss_pred CCceeeecccccccCCCCCcceEEECCCCCEEEEEe-CCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEEC
Confidence 65432 2222 234678899999999887643 457899999982 322 2222211 112256689999
Q ss_pred cCCCeEEEEE-ecCcEEEEEcCC--c--eeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCc
Q 014755 232 PCGQFLAVGS-YDQTLRVLNHLT--W--KTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGH 306 (419)
Q Consensus 232 ~~~~~l~~~~-~d~~i~v~d~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (419)
|+|++|+++. .++.|++||+.. + +.+..+.
T Consensus 240 ~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~--------------------------------------------- 274 (343)
T 1ri6_A 240 PDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP--------------------------------------------- 274 (343)
T ss_dssp TTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEE---------------------------------------------
T ss_pred CCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeec---------------------------------------------
Confidence 9999887554 689999999872 2 2222211
Q ss_pred eEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEec-CCCCceEEEeecc--CCCceee--cccCCCeeE
Q 014755 307 IKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRN-DSMPTTLWIWDIC--RQEPAAI--LVQKDPIRA 381 (419)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-~d~~~~i~iwd~~--~~~~~~~--~~~~~~v~~ 381 (419)
.+. .+..++|+|+|++|++++ .+ +.|.+|+++ ++++..+ +.......+
T Consensus 275 ------------------------~~~-~~~~~~~s~dg~~l~~~~~~~--~~v~v~~~d~~~g~~~~~~~~~~g~~p~~ 327 (343)
T 1ri6_A 275 ------------------------TET-QPRGFNVDHSGKYLIAAGQKS--HHISVYEIVGEQGLLHEKGRYAVGQGPMW 327 (343)
T ss_dssp ------------------------CSS-SCCCEEECTTSSEEEEECTTT--CEEEEEEEETTTTEEEEEEEEECSSSCCE
T ss_pred ------------------------CCC-ccceEEECCCCCEEEEecCCC--CeEEEEEEcCCCceeeEccccccCCCCee
Confidence 011 156799999999888887 46 999999554 5544332 233356777
Q ss_pred EEeCCCCC
Q 014755 382 ATWDPTCT 389 (419)
Q Consensus 382 ~~~s~~~~ 389 (419)
++|.|+.+
T Consensus 328 i~~~~~~~ 335 (343)
T 1ri6_A 328 VVVNAHEG 335 (343)
T ss_dssp EEEEEEC-
T ss_pred EEEEcccC
Confidence 88876554
No 144
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.97 E-value=4.2e-28 Score=211.03 Aligned_cols=271 Identities=12% Similarity=0.007 Sum_probs=204.6
Q ss_pred CeEEEEeccCCeEEEEEccCCcceeeeecCCc--cEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCC----
Q 014755 60 EYILCGLYKRLMIQAWSLTQPEWTCKIDEGLA--GIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPK---- 132 (419)
Q Consensus 60 ~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~---- 132 (419)
+++++++.+ +.|.+||+.+++.+..+..... .+..++|+|+++.+++++..++.|.+||+.+++... +....
T Consensus 2 ~~~v~~~~~-~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~ 80 (337)
T 1pby_B 2 DYILAPARP-DKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEER 80 (337)
T ss_dssp EEEEEEETT-TEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEE
T ss_pred cEEEEcCCC-CeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccc
Confidence 467777766 8999999999988777653332 478899999999887776655599999999988776 33211
Q ss_pred -CCeeeEEEccCCCEEEEEeec-----C----CCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCce
Q 014755 133 -HASKGVAFTQDGKFAAICTRR-----D----CKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYK 202 (419)
Q Consensus 133 -~~~~~~~~~~~~~~l~~~~~~-----~----~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~ 202 (419)
..+..++|+|++++++++... . .++.|.+||+.+++.+..+.. ...+..++|+|+++++++. ++.
T Consensus 81 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~----~~~ 155 (337)
T 1pby_B 81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL----GRD 155 (337)
T ss_dssp EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE----SSS
T ss_pred cccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe----CCe
Confidence 156889999999998888521 0 137999999999988877765 4567889999999998884 578
Q ss_pred EEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecC------------------------cEEEEEcCCceee
Q 014755 203 VLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQ------------------------TLRVLNHLTWKTF 257 (419)
Q Consensus 203 i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~------------------------~i~v~d~~~~~~~ 257 (419)
|++||+ +++....+..... ...+.|+|++++++..+..+ .|.+||+.+++..
T Consensus 156 i~~~d~~~~~~~~~~~~~~~---~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 232 (337)
T 1pby_B 156 LHVMDPEAGTLVEDKPIQSW---EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA 232 (337)
T ss_dssp EEEEETTTTEEEEEECSTTT---TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE
T ss_pred EEEEECCCCcEeeeeecccc---CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce
Confidence 999999 7777666654432 12347899998776554332 3567776665543
Q ss_pred eeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceE
Q 014755 258 AEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIG 337 (419)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 337 (419)
.+.. ..+...+.
T Consensus 233 -~~~~-------------------------------------------------------------------~~~~~~~~ 244 (337)
T 1pby_B 233 -MREV-------------------------------------------------------------------RIMDVFYF 244 (337)
T ss_dssp -EEEE-------------------------------------------------------------------EECSSCEE
T ss_pred -Eeec-------------------------------------------------------------------CCCCCcee
Confidence 2110 01333467
Q ss_pred EEEEccCCeEEEEecCCCCceEEEeeccCCCceeecccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEE
Q 014755 338 LMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCV 411 (419)
Q Consensus 338 ~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~ 411 (419)
.++|+|||++++++ + +.|++||+.+++....+.....+.+++|+|||++|++++.++.|.+||+.+++.+
T Consensus 245 ~~~~s~dg~~l~~~--~--~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~ 314 (337)
T 1pby_B 245 STAVNPAKTRAFGA--Y--NVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKK 314 (337)
T ss_dssp EEEECTTSSEEEEE--E--SEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEE
T ss_pred eEEECCCCCEEEEe--C--CeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEE
Confidence 89999999999888 5 8999999999988877766677899999999999998899999999999977654
No 145
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.97 E-value=6e-29 Score=238.36 Aligned_cols=322 Identities=11% Similarity=0.096 Sum_probs=221.8
Q ss_pred CeEEcCCCCEEEEEeCCeEEEEecCCCcEEEEeecCc----ceeEEEEecCCCeEEEEecc--------CCeEEEEEccC
Q 014755 12 PSCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFSCLD----KISYIEWALDSEYILCGLYK--------RLMIQAWSLTQ 79 (419)
Q Consensus 12 ~~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~~~~----~v~~~~~s~~~~~l~~~~~~--------~g~i~iw~~~~ 79 (419)
.++|+|||++++.+.+++|++||+.+++...++.+.. .+.+++|||||++|++++.. ++.|++||+.+
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~ 99 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN 99 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCC
Confidence 3899999987777678999999999999888877543 39999999999999988751 27999999998
Q ss_pred Ccce--eeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCC--CC-----------------eeeE
Q 014755 80 PEWT--CKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPK--HA-----------------SKGV 138 (419)
Q Consensus 80 ~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~--~~-----------------~~~~ 138 (419)
++.. ..+ ...+..++|||||+.|+++. ++ .|++|++.+++...+.... .. ..++
T Consensus 100 g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~-~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~ 174 (719)
T 1z68_A 100 GEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QN-NIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYAL 174 (719)
T ss_dssp TEECCSSCC---CSSBCCEEECSSTTCEEEEE-TT-EEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCE
T ss_pred Cccccceec---CcccccceECCCCCEEEEEE-CC-eEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccE
Confidence 8752 222 24688899999999999986 44 8999999988876643221 11 1489
Q ss_pred EEccCCCEEEEEeecCC-------------------------------CCeEEEEeccCCeEE---E-----EEeccccc
Q 014755 139 AFTQDGKFAAICTRRDC-------------------------------KDYINLLSCHTWEIM---G-----VFAVDTLD 179 (419)
Q Consensus 139 ~~~~~~~~l~~~~~~~~-------------------------------~g~v~i~d~~~~~~~---~-----~~~~~~~~ 179 (419)
+|+|||++|++++.++. ...|++||+.+++.. . .+..+...
T Consensus 175 ~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 254 (719)
T 1z68_A 175 WWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYY 254 (719)
T ss_dssp EECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEE
T ss_pred EECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcce
Confidence 99999999999886521 117889999887642 1 12346677
Q ss_pred eeeeeECCCCCeEEEEcCC--CCceEEEEc----C-CCceEEEE----eecCCCCcee-----EEEEccCCCeEEE--EE
Q 014755 180 LADIEWSPDDSAIVIWDSP--LEYKVLIYS----P-DGRCLLKY----QAYESGLGVK-----SISWSPCGQFLAV--GS 241 (419)
Q Consensus 180 v~~~~~~~~~~~l~~~~~~--~~~~i~~~d----~-~~~~~~~~----~~~~~~~~v~-----~~~~s~~~~~l~~--~~ 241 (419)
+..++|+||++.++.+... ....|++|| . +++....+ ..+.. .+. .++|+|||+.|+. ..
T Consensus 255 ~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~spdg~~l~~~~~~ 332 (719)
T 1z68_A 255 FSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTG--WAGGFFVSTPVFSYDAISYYKIFSD 332 (719)
T ss_dssp EEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSS--CSSSSSCCCCEECTTSSCEEEEEEC
T ss_pred EEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCc--eEccccCCccEECCCCCeEEEEEEc
Confidence 8999999998766653222 225689999 7 44433222 12222 455 7899999997665 33
Q ss_pred ecC--cEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCC
Q 014755 242 YDQ--TLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPIS 319 (419)
Q Consensus 242 ~d~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (419)
.++ .|++||+.+++. ..+.
T Consensus 333 ~~g~~~l~~~~~~~~~~-~~lt---------------------------------------------------------- 353 (719)
T 1z68_A 333 KDGYKHIHYIKDTVENA-IQIT---------------------------------------------------------- 353 (719)
T ss_dssp TTSCEEEEEESSCSTTC-EECS----------------------------------------------------------
T ss_pred cCCceEEEEEECCCCce-Eecc----------------------------------------------------------
Confidence 444 567777665542 2221
Q ss_pred CCCCCCCCCCCCCCcceEEEEEccCCeEEEEec-C--CCCceEEEeeccC--CC--ceeec----ccCCCeeEEEeCCCC
Q 014755 320 LPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRN-D--SMPTTLWIWDICR--QE--PAAIL----VQKDPIRAATWDPTC 388 (419)
Q Consensus 320 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-~--d~~~~i~iwd~~~--~~--~~~~~----~~~~~v~~~~~s~~~ 388 (419)
.+...+..+.++ +++.|+..+ . +.++.+++|.+.. +. ...+. +|...+..+.|+||+
T Consensus 354 -----------~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg 421 (719)
T 1z68_A 354 -----------SGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYA 421 (719)
T ss_dssp -----------CSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGG
T ss_pred -----------cCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCC
Confidence 122235666666 666665544 3 1127788887764 42 22222 256678899999999
Q ss_pred CeEEE-EeCC--CcEEEeecCCCeEE
Q 014755 389 TRLVL-CTGS--SHLYMWTPSGAYCV 411 (419)
Q Consensus 389 ~~l~s-~~~d--g~i~vw~~~~~~~~ 411 (419)
++++. ++.+ ..+.+|++.+++++
T Consensus 422 ~~l~~~~s~~~~p~~~l~d~~~g~~~ 447 (719)
T 1z68_A 422 KYYALVCYGPGIPISTLHDGRTDQEI 447 (719)
T ss_dssp SSEEEEECCBSSCEEEEECSSSCCEE
T ss_pred CEEEEEcCCCCCCeEEEEECCCCCEE
Confidence 97764 3333 46889999877654
No 146
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.97 E-value=6.9e-29 Score=238.27 Aligned_cols=283 Identities=10% Similarity=0.057 Sum_probs=205.8
Q ss_pred cceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCc---cEeEEEECCCCCEEEEEecCC--------CeEE
Q 014755 48 DKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLA---GIAYARWSPDSRHILTTSDFQ--------LRLT 116 (419)
Q Consensus 48 ~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~~~--------~~i~ 116 (419)
..+.+++|+|||+++++ +.+ |+|++||+.+++....+..+.. .+.+++|||||++|++++.+. +.+.
T Consensus 17 ~~~~~~~~spdg~~~~~-~~d-g~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~ 94 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQK-GTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYV 94 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSS-SCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEE
T ss_pred ccccccEEcCCCcEEEE-eCC-CCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEE
Confidence 34778999999997766 445 8999999999988777766654 489999999999999997642 4899
Q ss_pred EEEcCCCeEEEecc---CCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccce-------------
Q 014755 117 VWSLLNTACVHVQS---PKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDL------------- 180 (419)
Q Consensus 117 iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v------------- 180 (419)
+||+.+++...+.. +...+..++|||||+.|++++. +.|++||+.+++..+....+...+
T Consensus 95 ~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~----~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee 170 (723)
T 1xfd_A 95 LSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE----NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEE 170 (723)
T ss_dssp EEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET----TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHT
T ss_pred EEECCCCceEeccCCccccccccccEECCCCCEEEEEEC----CeEEEEECCCCceEEEecCCCCCceECcccceeEEEE
Confidence 99999988755433 2334789999999999999885 589999999887766555443333
Q ss_pred -----eeeeECCCCCeEEEEcCCC--------------------------------CceEEEEcC-CCceEEEEeecC--
Q 014755 181 -----ADIEWSPDDSAIVIWDSPL--------------------------------EYKVLIYSP-DGRCLLKYQAYE-- 220 (419)
Q Consensus 181 -----~~~~~~~~~~~l~~~~~~~--------------------------------~~~i~~~d~-~~~~~~~~~~~~-- 220 (419)
.+++|+|||+.|++..... +..|++||+ +++....+..+.
T Consensus 171 ~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~ 250 (723)
T 1xfd_A 171 ILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDP 250 (723)
T ss_dssp TSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCG
T ss_pred eccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccC
Confidence 7899999999998743210 238999999 555445555431
Q ss_pred --CCCceeEEEEccCCCeEEEEEe----cCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCc
Q 014755 221 --SGLGVKSISWSPCGQFLAVGSY----DQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDD 294 (419)
Q Consensus 221 --~~~~v~~~~~s~~~~~l~~~~~----d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (419)
+...+..++|+|||++|++... +..|++||+.+++....+...
T Consensus 251 ~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~------------------------------- 299 (723)
T 1xfd_A 251 RMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDE------------------------------- 299 (723)
T ss_dssp GGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEE-------------------------------
T ss_pred CCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEec-------------------------------
Confidence 1236899999999998877654 357999999988765544210
Q ss_pred cccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcce----EEEEEccCCeEEEEe--cCCCCc------eEEEe
Q 014755 295 FIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGI----GLMSWSSDSQYICTR--NDSMPT------TLWIW 362 (419)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v----~~~~~s~~g~~l~~~--~~d~~~------~i~iw 362 (419)
+...+ ..++|||||+.|+.. ..+ + .|++|
T Consensus 300 -------------------------------------~~~~~~~~~~~~~~spdg~~l~~~~~~~~--~~~~~~~~l~~~ 340 (723)
T 1xfd_A 300 -------------------------------------SEAWLHRQNEEPVFSKDGRKFFFIRAIPQ--GGRGKFYHITVS 340 (723)
T ss_dssp -------------------------------------CSSCCCCCCCCCEECTTSCSEEEEEEECC--SSSSCEEEEEEE
T ss_pred -------------------------------------cCCEEeccCCCceEcCCCCeEEEEEeccc--CCCcceeEEEEE
Confidence 01111 257999999988764 344 6 57778
Q ss_pred e-ccCCC---ceeecccCCCeeE-EEeCCCCCeEEEEeCC---CcEEEeecC
Q 014755 363 D-ICRQE---PAAILVQKDPIRA-ATWDPTCTRLVLCTGS---SHLYMWTPS 406 (419)
Q Consensus 363 d-~~~~~---~~~~~~~~~~v~~-~~~s~~~~~l~s~~~d---g~i~vw~~~ 406 (419)
| ..+++ ...+..+...+.. ++|+|||+.|+..+.+ +.++||++.
T Consensus 341 d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~ 392 (723)
T 1xfd_A 341 SSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSAN 392 (723)
T ss_dssp CSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEEC
T ss_pred eccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEe
Confidence 8 45555 4444434444554 6999999998766655 789999986
No 147
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.96 E-value=1.8e-26 Score=201.20 Aligned_cols=284 Identities=11% Similarity=0.151 Sum_probs=193.2
Q ss_pred CCeEEEEeccCCeEEEEEcc-CCcc-eeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcC--CCeEEE---eccC
Q 014755 59 SEYILCGLYKRLMIQAWSLT-QPEW-TCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLL--NTACVH---VQSP 131 (419)
Q Consensus 59 ~~~l~~~~~~~g~i~iw~~~-~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~--~~~~~~---~~~~ 131 (419)
++++++++..++.|++|++. +++. ......+...+.+++|+|++++|++++.+++.|.+|++. +++... +..
T Consensus 4 ~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~- 82 (343)
T 1ri6_A 4 KQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL- 82 (343)
T ss_dssp EEEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC-
T ss_pred eEEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccccc-
Confidence 34555553444899999996 3322 122235667789999999999999998874599999998 555432 333
Q ss_pred CCCeeeEEEccCCCEEEEEeecCCCCeEEEEecc---CCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC
Q 014755 132 KHASKGVAFTQDGKFAAICTRRDCKDYINLLSCH---TWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP 208 (419)
Q Consensus 132 ~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~ 208 (419)
...+..++|+|+++++++++.+ ++.|.+||+. ..+....+.. ...+.+++|+|+++++++.+ ..++.|++||+
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~~--~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~-~~~~~v~~~d~ 158 (343)
T 1ri6_A 83 PGSLTHISTDHQGQFVFVGSYN--AGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPA-LKQDRICLFTV 158 (343)
T ss_dssp SSCCSEEEECTTSSEEEEEETT--TTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEE-GGGTEEEEEEE
T ss_pred CCCCcEEEEcCCCCEEEEEecC--CCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEec-CCCCEEEEEEe
Confidence 3377999999999998887753 3789999994 3344444443 34588999999999888743 25789999999
Q ss_pred -C-CceEE----EEeecCCCCceeEEEEccCCCeEEEEE-ecCcEEEEEcCC--ceeeeeecccccccCCCccceeccCC
Q 014755 209 -D-GRCLL----KYQAYESGLGVKSISWSPCGQFLAVGS-YDQTLRVLNHLT--WKTFAEFMHLSTVRGPCFPAVFKEVD 279 (419)
Q Consensus 209 -~-~~~~~----~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~v~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (419)
+ ++... .+... ....+..++|+|+++++++++ .++.|++|++.. ++... ......+
T Consensus 159 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~-~~~~~~~------------- 223 (343)
T 1ri6_A 159 SDDGHLVAQDPAEVTTV-EGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIEC-VQTLDMM------------- 223 (343)
T ss_dssp CTTSCEEEEEEEEEECS-TTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEE-EEEEECS-------------
T ss_pred cCCCceeeecccccccC-CCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEE-Eeecccc-------------
Confidence 4 54432 22222 123688999999999776665 788999999853 32211 1000000
Q ss_pred CcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEe-cCCCCce
Q 014755 280 EPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTR-NDSMPTT 358 (419)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~-~~d~~~~ 358 (419)
+. .......+..++|+|+|++|+++ ..+ +.
T Consensus 224 -~~----------------------------------------------~~~~~~~~~~i~~s~dg~~l~v~~~~~--~~ 254 (343)
T 1ri6_A 224 -PE----------------------------------------------NFSDTRWAADIHITPDGRHLYACDRTA--SL 254 (343)
T ss_dssp -CT----------------------------------------------TCCSCCCEEEEEECTTSSEEEEEETTT--TE
T ss_pred -Cc----------------------------------------------cccccCCccceEECCCCCEEEEEecCC--CE
Confidence 00 00012346789999999887754 456 99
Q ss_pred EEEeecc--CCC--ceeecccCCCeeEEEeCCCCCeEEEEe-CCCcEEEeec--CCCeEE
Q 014755 359 LWIWDIC--RQE--PAAILVQKDPIRAATWDPTCTRLVLCT-GSSHLYMWTP--SGAYCV 411 (419)
Q Consensus 359 i~iwd~~--~~~--~~~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~i~vw~~--~~~~~~ 411 (419)
|++||+. +++ ....+.....+.+++|+|+|++|++++ .++.|.+|++ .++++.
T Consensus 255 i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~ 314 (343)
T 1ri6_A 255 ITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLH 314 (343)
T ss_dssp EEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEE
T ss_pred EEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceee
Confidence 9999998 333 333333334489999999999888777 6899999955 466543
No 148
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.96 E-value=9.1e-27 Score=198.67 Aligned_cols=221 Identities=14% Similarity=0.092 Sum_probs=169.6
Q ss_pred CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccC-CcceeeeecCC-ccEeEEEECCCCCE
Q 014755 27 DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQ-PEWTCKIDEGL-AGIAYARWSPDSRH 104 (419)
Q Consensus 27 ~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~-~~~~~~~~~~~-~~v~~~~~~~~~~~ 104 (419)
++.|++||+.+++......|...|.+++|+|+|++|++++ + +.|++||+.+ ++.......+. ..+.+++|+|++++
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~-~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 98 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-E-GLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGAL 98 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-T-TEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSE
T ss_pred ceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-C-CeEEEEeCCCCCCceEeccccccccccceEECCCCCE
Confidence 6779999999999988888999999999999999999986 4 7999999998 77665554553 67899999999999
Q ss_pred EEEEecC---CCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEE-EeecCCCCeEEEEeccC-CeEEEEEeccccc
Q 014755 105 ILTTSDF---QLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAI-CTRRDCKDYINLLSCHT-WEIMGVFAVDTLD 179 (419)
Q Consensus 105 l~~~~~~---~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~g~v~i~d~~~-~~~~~~~~~~~~~ 179 (419)
|++++.+ ...|..+++.+++...+..+ ..+..++|+|++++|++ +..+ +.+++|+++. ......+..+...
T Consensus 99 l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~ 174 (297)
T 2ojh_A 99 YAISDKVEFGKSAIYLLPSTGGTPRLMTKN-LPSYWHGWSPDGKSFTYCGIRD---QVFDIYSMDIDSGVETRLTHGEGR 174 (297)
T ss_dssp EEEEECTTTSSCEEEEEETTCCCCEECCSS-SSEEEEEECTTSSEEEEEEEET---TEEEEEEEETTTCCEEECCCSSSC
T ss_pred EEEEEeCCCCcceEEEEECCCCceEEeecC-CCccceEECCCCCEEEEEECCC---CceEEEEEECCCCcceEcccCCCc
Confidence 9999832 22566666666665544433 34888999999998885 4444 6788888542 2334556667778
Q ss_pred eeeeeECCCCCeEEEEcCCCCceEEEEcC--CCceEEEEeecCCCCceeEEEEccCCCeEEEEEec-----------CcE
Q 014755 180 LADIEWSPDDSAIVIWDSPLEYKVLIYSP--DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYD-----------QTL 246 (419)
Q Consensus 180 v~~~~~~~~~~~l~~~~~~~~~~i~~~d~--~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----------~~i 246 (419)
+.++.|+|+++.+++.. ..++.+.+|++ .+..+..+..+.. .+..++|+|+|++|++++.+ +.|
T Consensus 175 ~~~~~~s~dg~~l~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l 251 (297)
T 2ojh_A 175 NDGPDYSPDGRWIYFNS-SRTGQMQIWRVRVDGSSVERITDSAY--GDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRV 251 (297)
T ss_dssp EEEEEECTTSSEEEEEE-CTTSSCEEEEEETTSSCEEECCCCSE--EEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEE
T ss_pred cccceECCCCCEEEEEe-cCCCCccEEEECCCCCCcEEEecCCc--ccCCeEECCCCCEEEEEEcCCCCCcccccCceEE
Confidence 99999999999888643 23566666665 5666666655443 78999999999999988876 569
Q ss_pred EEEEcCCcee
Q 014755 247 RVLNHLTWKT 256 (419)
Q Consensus 247 ~v~d~~~~~~ 256 (419)
++||+.+++.
T Consensus 252 ~~~d~~~~~~ 261 (297)
T 2ojh_A 252 QLMDMDGGNV 261 (297)
T ss_dssp EEEETTSCSC
T ss_pred EEEecCCCCc
Confidence 9999987654
No 149
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.96 E-value=3e-26 Score=200.31 Aligned_cols=282 Identities=14% Similarity=-0.022 Sum_probs=198.7
Q ss_pred CeEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEeecCc--ceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeec
Q 014755 12 PSCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFSCLD--KISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDE 88 (419)
Q Consensus 12 ~~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~ 88 (419)
.++++++++++++++ ++.|.+||..+++.+..+.... .+..++|+|+|++++++...++.|.+||+.+++....+..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 367889999999887 8899999999999888776554 6889999999998776665558999999999887766653
Q ss_pred CC------ccEeEEEECCCCCEEEEEecC-----------CCeEEEEEcCCCeE---EEeccCCCCeeeEEEccCCCEEE
Q 014755 89 GL------AGIAYARWSPDSRHILTTSDF-----------QLRLTVWSLLNTAC---VHVQSPKHASKGVAFTQDGKFAA 148 (419)
Q Consensus 89 ~~------~~v~~~~~~~~~~~l~~~~~~-----------~~~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~ 148 (419)
.. ..+..++|+|+|+++++++.+ .+.|.+||+.+++. .........+.+++|+|+++ ++
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~ 162 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LY 162 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EE
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EE
Confidence 32 237889999999999998855 24999999988432 22223444688999999999 55
Q ss_pred EEeecCCCCeEEEEeccCCeEEEEEecccc------------------------ceeeeeECCCCCeEEEEcCCCCceEE
Q 014755 149 ICTRRDCKDYINLLSCHTWEIMGVFAVDTL------------------------DLADIEWSPDDSAIVIWDSPLEYKVL 204 (419)
Q Consensus 149 ~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~------------------------~v~~~~~~~~~~~l~~~~~~~~~~i~ 204 (419)
+++ +.|++||+.+++.+..+..+.. ....+++++++...... ......+.
T Consensus 163 ~~~-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~~ 236 (349)
T 1jmx_B 163 VAG-----PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPAT-ADLLYGYL 236 (349)
T ss_dssp EES-----SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CC-CEEEEEEE
T ss_pred Ecc-----CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccc-cccceeEE
Confidence 543 3599999999988776654320 23345555544221110 00011222
Q ss_pred EEcCCCceEEEEeecCCCCceeEEEEcc-CCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCccc
Q 014755 205 IYSPDGRCLLKYQAYESGLGVKSISWSP-CGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQ 283 (419)
Q Consensus 205 ~~d~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (419)
.++.....+..+........+.+++|+| ++++++++ ++.|++||+.+++.+..+...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-------------------- 294 (349)
T 1jmx_B 237 SVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-------------------- 294 (349)
T ss_dssp EEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS--------------------
T ss_pred EEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC--------------------
Confidence 2455222223332222333688999999 99999888 789999999998877665311
Q ss_pred ccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEee
Q 014755 284 LDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWD 363 (419)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd 363 (419)
..+.+++|+|+|++|++++.+ +.|++||
T Consensus 295 --------------------------------------------------~~~~~~~~s~dg~~l~~~~~~--~~v~v~d 322 (349)
T 1jmx_B 295 --------------------------------------------------HTYYCVAFDKKGDKLYLGGTF--NDLAVFN 322 (349)
T ss_dssp --------------------------------------------------SCCCEEEECSSSSCEEEESBS--SEEEEEE
T ss_pred --------------------------------------------------CCccceEECCCCCEEEEecCC--CeEEEEe
Confidence 124578999999999888877 9999999
Q ss_pred ccCCCceeecc
Q 014755 364 ICRQEPAAILV 374 (419)
Q Consensus 364 ~~~~~~~~~~~ 374 (419)
+.+++.+..+.
T Consensus 323 ~~~~~~~~~~~ 333 (349)
T 1jmx_B 323 PDTLEKVKNIK 333 (349)
T ss_dssp TTTTEEEEEEE
T ss_pred ccccceeeeee
Confidence 99988776654
No 150
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.96 E-value=2.9e-27 Score=221.06 Aligned_cols=284 Identities=9% Similarity=-0.001 Sum_probs=199.1
Q ss_pred CcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCC-ccEeEEEECCCCCEEEEEec---CCCeEEEE--Ec
Q 014755 47 LDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGL-AGIAYARWSPDSRHILTTSD---FQLRLTVW--SL 120 (419)
Q Consensus 47 ~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~---~~~~i~iw--d~ 120 (419)
..+|.+++|+|||+.||+++..+|+++||++++++. .++..+. ..+..++|+|| +.+++++. +. ...+| +.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~-~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~-~~~l~~~~~ 97 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGET-VKLNREPINSVLDPHYGVG-RVILVRDVSKGAE-QHALFKVNT 97 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEE-EECCSSCCSEECEECTTCS-EEEEEEECSTTSC-CEEEEEEET
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCc-EeeecccccccccccCCCC-eEEEEeccCCCCc-ceEEEEEec
Confidence 457999999999999999987458999999976654 4555565 68999999999 66666654 22 44555 44
Q ss_pred --CCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCC
Q 014755 121 --LNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSP 198 (419)
Q Consensus 121 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 198 (419)
..+.. .+.. .......+|+|+++.++..+.. .+.+.+||+.+++.......+. .+++|+|||+.++.....
T Consensus 98 ~~~g~~~-~l~~-~~~~~~~~~s~dg~~~~~~s~~--~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~ 170 (582)
T 3o4h_A 98 SRPGEEQ-RLEA-VKPMRILSGVDTGEAVVFTGAT--EDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFF 170 (582)
T ss_dssp TSTTCCE-ECTT-SCSBEEEEEEECSSCEEEEEEC--SSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEE
T ss_pred cCCCccc-cccC-CCCceeeeeCCCCCeEEEEecC--CCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEc
Confidence 33333 3322 2234577899999765444432 1456699999987765554332 789999999999963221
Q ss_pred --CCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecC--cEEEEEcCCceeeeeec-ccccccCCCccc
Q 014755 199 --LEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQ--TLRVLNHLTWKTFAEFM-HLSTVRGPCFPA 273 (419)
Q Consensus 199 --~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~--~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~ 273 (419)
....|++||+.+.....+..+.. .+..++|||||++|+++..++ .|++||+.+++.. .+. +...+..
T Consensus 171 ~~~~~~i~~~d~~~g~~~~l~~~~~--~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~----- 242 (582)
T 3o4h_A 171 GGGRVSLFTSNLSSGGLRVFDSGEG--SFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSS----- 242 (582)
T ss_dssp ETTEEEEEEEETTTCCCEEECCSSC--EEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHH-----
T ss_pred CCCCeEEEEEcCCCCCceEeecCCC--ccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhh-----
Confidence 12679999994444456655544 789999999999999887888 8999999988766 332 2111100
Q ss_pred eeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecC
Q 014755 274 VFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRND 353 (419)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 353 (419)
. ........+|||||.++++++.
T Consensus 243 ---~------------------------------------------------------~~~~~~~~~~spdg~~~~~~~~ 265 (582)
T 3o4h_A 243 ---Y------------------------------------------------------RPTAITWLGYLPDGRLAVVARR 265 (582)
T ss_dssp ---H------------------------------------------------------CCSEEEEEEECTTSCEEEEEEE
T ss_pred ---h------------------------------------------------------hhccccceeEcCCCcEEEEEEc
Confidence 0 0011234559999988889988
Q ss_pred CCCceEEEeeccCCCceeecccCCCeeEEEeCCCCCeEEEEeCCC---cEEEeecCCCeEEec
Q 014755 354 SMPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCTRLVLCTGSS---HLYMWTPSGAYCVSN 413 (419)
Q Consensus 354 d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg---~i~vw~~~~~~~~~~ 413 (419)
+ +.++||++ +++.. .+.+.+.+++|+ +++++++++.+. .+.+|+..+ +..++
T Consensus 266 ~--g~~~l~~~--g~~~~--~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 266 E--GRSAVFID--GERVE--APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE-PLLEG 320 (582)
T ss_dssp T--TEEEEEET--TEEEC--CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC-EEECC
T ss_pred C--CcEEEEEE--CCeec--cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC-ceEEE
Confidence 8 99999999 65544 345678999999 999998888774 477777765 54443
No 151
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.96 E-value=3e-27 Score=220.93 Aligned_cols=231 Identities=10% Similarity=0.012 Sum_probs=170.3
Q ss_pred eEEcCCCCEEEEEe--CCeEEEEecCCCcEEEEeecC-cceeEEEEecCCCeEEEEec--cCCeEEEEEccC---Cccee
Q 014755 13 SCFSPNARYIAVAV--DYRLVVRDAHSFKVVQLFSCL-DKISYIEWALDSEYILCGLY--KRLMIQAWSLTQ---PEWTC 84 (419)
Q Consensus 13 ~~~s~d~~~la~~~--~~~i~i~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~--~~g~i~iw~~~~---~~~~~ 84 (419)
++|+|||++||+++ ++++.||++.+++..++..+. ..+..++|||| +.++++.. .+...++|.+.. +...
T Consensus 27 ~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~- 104 (582)
T 3o4h_A 27 LQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ- 104 (582)
T ss_dssp EEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-
T ss_pred eecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-
Confidence 88999999999986 788999999888887777766 58999999999 66666653 123456655543 2222
Q ss_pred eeecCCccEeEEEECCCCCEEEEE-ecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCC-CeEEEE
Q 014755 85 KIDEGLAGIAYARWSPDSRHILTT-SDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCK-DYINLL 162 (419)
Q Consensus 85 ~~~~~~~~v~~~~~~~~~~~l~~~-~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-g~v~i~ 162 (419)
.+.... .+...+|+|+++.++.. +.++ .+.+||+.+++...+..+.. .+++|+|||++|++++.+... +.|++|
T Consensus 105 ~l~~~~-~~~~~~~s~dg~~~~~~s~~~~-~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~ 180 (582)
T 3o4h_A 105 RLEAVK-PMRILSGVDTGEAVVFTGATED-RVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTS 180 (582)
T ss_dssp ECTTSC-SBEEEEEEECSSCEEEEEECSS-CEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred cccCCC-CceeeeeCCCCCeEEEEecCCC-CceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEE
Confidence 443332 34467888988754443 3333 56699999998877544433 889999999999987765322 579999
Q ss_pred eccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCc--eEEEEcC-CCceEEEEeecCCCCceeEEE--------Ec
Q 014755 163 SCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEY--KVLIYSP-DGRCLLKYQAYESGLGVKSIS--------WS 231 (419)
Q Consensus 163 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~--~i~~~d~-~~~~~~~~~~~~~~~~v~~~~--------~s 231 (419)
|+.+++.. .+..+...+..++|+|||+.|+.. ..++ .|++||+ +++.. .+..+.. .+..++ |+
T Consensus 181 d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~--~~~~~~~i~~~d~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~s 254 (582)
T 3o4h_A 181 NLSSGGLR-VFDSGEGSFSSASISPGMKVTAGL--ETAREARLVTVDPRDGSVE-DLELPSK--DFSSYRPTAITWLGYL 254 (582)
T ss_dssp ETTTCCCE-EECCSSCEEEEEEECTTSCEEEEE--ECSSCEEEEEECTTTCCEE-ECCCSCS--HHHHHCCSEEEEEEEC
T ss_pred cCCCCCce-EeecCCCccccceECCCCCEEEEc--cCCCeeEEEEEcCCCCcEE-EccCCCc--ChhhhhhccccceeEc
Confidence 99887754 567777889999999999999963 3455 8999999 55544 4444333 566666 99
Q ss_pred cCCCeEEEEEecCcEEEEEcCCceee
Q 014755 232 PCGQFLAVGSYDQTLRVLNHLTWKTF 257 (419)
Q Consensus 232 ~~~~~l~~~~~d~~i~v~d~~~~~~~ 257 (419)
|||+++++++.++++++|++ ++.+
T Consensus 255 pdg~~~~~~~~~g~~~l~~~--g~~~ 278 (582)
T 3o4h_A 255 PDGRLAVVARREGRSAVFID--GERV 278 (582)
T ss_dssp TTSCEEEEEEETTEEEEEET--TEEE
T ss_pred CCCcEEEEEEcCCcEEEEEE--CCee
Confidence 99988899999999999998 5543
No 152
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.96 E-value=1.3e-26 Score=197.76 Aligned_cols=253 Identities=15% Similarity=0.171 Sum_probs=188.1
Q ss_pred CCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC-CeEEEec-cC-CCCeeeEEEccCCC
Q 014755 69 RLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN-TACVHVQ-SP-KHASKGVAFTQDGK 145 (419)
Q Consensus 69 ~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~-~~~~~~~-~~-~~~~~~~~~~~~~~ 145 (419)
++.|++||+.+++.. .+..|...+.+++|+|++++|++++ ++ .|++||+.+ ++...+. .+ ...+.+++|+|+++
T Consensus 21 ~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~-~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~ 97 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EG-LLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGA 97 (297)
T ss_dssp CEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TT-EEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSS
T ss_pred ceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CC-eEEEEeCCCCCCceEeccccccccccceEECCCCC
Confidence 479999999988765 5556888999999999999999987 45 899999999 8777633 33 35678999999999
Q ss_pred EEEEEeecC-CCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC--CCceEEEEeecCCC
Q 014755 146 FAAICTRRD-CKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP--DGRCLLKYQAYESG 222 (419)
Q Consensus 146 ~l~~~~~~~-~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~--~~~~~~~~~~~~~~ 222 (419)
+|+++..+. ....|..+++.+++ ...+..+ ..+..++|+|+++.+++. ...++.+.+|++ .+.....+..+..
T Consensus 98 ~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~- 173 (297)
T 2ojh_A 98 LYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYC-GIRDQVFDIYSMDIDSGVETRLTHGEG- 173 (297)
T ss_dssp EEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEE-EEETTEEEEEEEETTTCCEEECCCSSS-
T ss_pred EEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEE-ECCCCceEEEEEECCCCcceEcccCCC-
Confidence 999988431 12466666666554 3333333 348889999999988743 234677788875 4444455544443
Q ss_pred CceeEEEEccCCCeEEEEE-ecCcEEEEEcC-CceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccc
Q 014755 223 LGVKSISWSPCGQFLAVGS-YDQTLRVLNHL-TWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNS 300 (419)
Q Consensus 223 ~~v~~~~~s~~~~~l~~~~-~d~~i~v~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (419)
.+.+++|+|+|++|++++ .++.+++|++. .+..+..+.
T Consensus 174 -~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~--------------------------------------- 213 (297)
T 2ojh_A 174 -RNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERIT--------------------------------------- 213 (297)
T ss_dssp -CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECC---------------------------------------
T ss_pred -ccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEe---------------------------------------
Confidence 799999999999888776 48899999875 333322221
Q ss_pred cccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCC---------CCceEEEeeccCCCcee
Q 014755 301 DATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDS---------MPTTLWIWDICRQEPAA 371 (419)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d---------~~~~i~iwd~~~~~~~~ 371 (419)
.|...+..++|+|+|++|++++.+ .++.|++||+.+++...
T Consensus 214 ------------------------------~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~ 263 (297)
T 2ojh_A 214 ------------------------------DSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVET 263 (297)
T ss_dssp ------------------------------CCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEE
T ss_pred ------------------------------cCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCcee
Confidence 244567889999999999888754 11569999999987654
Q ss_pred ec---ccCCCeeEEEeCCCCCeEEEEeCCC
Q 014755 372 IL---VQKDPIRAATWDPTCTRLVLCTGSS 398 (419)
Q Consensus 372 ~~---~~~~~v~~~~~s~~~~~l~s~~~dg 398 (419)
+. +|...+.+++|+|+++.|++++.|.
T Consensus 264 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 264 LFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred eeccCCCCcccccceECCCCCEEEEEEecc
Confidence 43 5788999999999999998887654
No 153
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.95 E-value=6.1e-26 Score=201.43 Aligned_cols=306 Identities=13% Similarity=0.025 Sum_probs=209.6
Q ss_pred EecCCCcEEEEee-cCcceeE-----EEEecCCCeEEEEeccCC--eEEEEEccCCcceeeeecCCccEeEEEECCCCCE
Q 014755 33 RDAHSFKVVQLFS-CLDKISY-----IEWALDSEYILCGLYKRL--MIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRH 104 (419)
Q Consensus 33 ~~~~~~~~~~~~~-~~~~v~~-----~~~s~~~~~l~~~~~~~g--~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 104 (419)
++..++.....+. |...... .+|||||++|++++..+| .|.+||+.+++.......+...+..+.|+|||+.
T Consensus 15 ~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~ 94 (388)
T 3pe7_A 15 QDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDA 94 (388)
T ss_dssp ECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSE
T ss_pred ecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCE
Confidence 4666776665544 5545555 899999999999986446 4888899888766555455555557889999999
Q ss_pred EEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeE--EEccCCCEEEEEeec-------------------CCCCeEEEE
Q 014755 105 ILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGV--AFTQDGKFAAICTRR-------------------DCKDYINLL 162 (419)
Q Consensus 105 l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~--~~~~~~~~l~~~~~~-------------------~~~g~v~i~ 162 (419)
|++++.+. .|++||+.+++... ...+...+... .++|+++.++....+ .....|++|
T Consensus 95 l~~~~~~~-~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 173 (388)
T 3pe7_A 95 LFYVKDGR-NLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRV 173 (388)
T ss_dssp EEEEETTT-EEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEE
T ss_pred EEEEeCCC-eEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEE
Confidence 99999876 99999999988776 33344334333 458999988754311 112579999
Q ss_pred eccCCeEEEEEeccccceeeeeECC-CCCeEEEEcCCC----CceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeE
Q 014755 163 SCHTWEIMGVFAVDTLDLADIEWSP-DDSAIVIWDSPL----EYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFL 237 (419)
Q Consensus 163 d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 237 (419)
|+.+++... +..+...+..+.|+| ||+.|++..... ...|+++|..+.....+..+.....+..++|+|||+.|
T Consensus 174 d~~~g~~~~-l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l 252 (388)
T 3pe7_A 174 DLKTGESTV-ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSAL 252 (388)
T ss_dssp ETTTCCEEE-EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCE
T ss_pred ECCCCceEE-eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEE
Confidence 999886544 444556789999999 999887744322 34789999866555555443322257789999999988
Q ss_pred EEEEec-C----cEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEE
Q 014755 238 AVGSYD-Q----TLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYE 312 (419)
Q Consensus 238 ~~~~~d-~----~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (419)
+..+.+ + .|++||+.+++.......+... .+.
T Consensus 253 ~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~-------~~~------------------------------------ 289 (388)
T 3pe7_A 253 VYVSYLKGSPDRFIYSADPETLENRQLTSMPACS-------HLM------------------------------------ 289 (388)
T ss_dssp EEEEEETTCCCEEEEEECTTTCCEEEEEEECCEE-------EEE------------------------------------
T ss_pred EEEecCCCCCcceEEEEecCCCceEEEEcCCCce-------eee------------------------------------
Confidence 776543 2 3999999987643221110000 000
Q ss_pred eccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEe---------cCCCCceEEEeeccCCCceeecccCC------
Q 014755 313 VMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTR---------NDSMPTTLWIWDICRQEPAAILVQKD------ 377 (419)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~---------~~d~~~~i~iwd~~~~~~~~~~~~~~------ 377 (419)
. . ...++|+|||+.|+.. ..+ ..|++||+.+++...+..+..
T Consensus 290 ~------------------~---~~~~~~spdg~~l~~~~~~~~~~~~~~~--~~i~~~d~~~~~~~~l~~~~~~~~~~~ 346 (388)
T 3pe7_A 290 S------------------N---YDGSLMVGDGSDAPVDVQDDSGYKIEND--PFLYVFNMKNGTQHRVARHDTSWKVFE 346 (388)
T ss_dssp E------------------C---TTSSEEEEEECCC------------CCC--CEEEEEETTTTEEEEEEECCCCCCCBT
T ss_pred e------------------c---CCCCeEccCCCcceeEeeeccccccCCC--CEEEEEeccCCceEEeccccCcccccc
Confidence 0 0 0113789999988864 333 789999999988776666665
Q ss_pred -----CeeEEEeCCCCCeEEEEe-CCCcEEEeecC
Q 014755 378 -----PIRAATWDPTCTRLVLCT-GSSHLYMWTPS 406 (419)
Q Consensus 378 -----~v~~~~~s~~~~~l~s~~-~dg~i~vw~~~ 406 (419)
.+.+++|+|||+.|+..+ .+|...||.+.
T Consensus 347 ~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 347 GDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLAT 381 (388)
T ss_dssp TBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred cccccCCCCccCCCCCCEEEEEecCCCceeEEEEE
Confidence 588999999999887666 46777777654
No 154
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.95 E-value=6.4e-25 Score=210.45 Aligned_cols=243 Identities=11% Similarity=0.109 Sum_probs=174.1
Q ss_pred ccCeEEcCCCCEEEEEeCCeEEEEecCCCcEEEEee-cCcc-----eeEEEEecCCCeEEEEeccC--------CeEEEE
Q 014755 10 TGPSCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFS-CLDK-----ISYIEWALDSEYILCGLYKR--------LMIQAW 75 (419)
Q Consensus 10 ~~~~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~-~~~~-----v~~~~~s~~~~~l~~~~~~~--------g~i~iw 75 (419)
...++|+|||++|+++ +++|++||+.+++...++. |... ...++|||||++|++++.+. +.+.+|
T Consensus 19 ~~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~ 97 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIY 97 (740)
T ss_dssp CCCEEECSSSEEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred ccccEECCCCcEEEEc-CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEE
Confidence 3349999999999987 9999999999999877765 3322 24489999999999987541 466799
Q ss_pred EccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCC--CCe-----------------e
Q 014755 76 SLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPK--HAS-----------------K 136 (419)
Q Consensus 76 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~--~~~-----------------~ 136 (419)
|+.+++.. .+..+...+..++|||||+.|+.+.. + .|++|++.+++..++.... ..+ .
T Consensus 98 d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~~-~-~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~ 174 (740)
T 4a5s_A 98 DLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVWN-N-DIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYS 174 (740)
T ss_dssp ETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEET-T-EEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSB
T ss_pred ECCCCcEE-EcccCCCcceeeEECCCCCEEEEEEC-C-eEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCc
Confidence 99998754 56677788999999999999999864 4 8999999998877643322 111 3
Q ss_pred eEEEccCCCEEEEEeecCC---------------------------------CCeEEEEeccC---C---eEEEEEe---
Q 014755 137 GVAFTQDGKFAAICTRRDC---------------------------------KDYINLLSCHT---W---EIMGVFA--- 174 (419)
Q Consensus 137 ~~~~~~~~~~l~~~~~~~~---------------------------------~g~v~i~d~~~---~---~~~~~~~--- 174 (419)
.+.|||||++|+++..|.. ...|++||+.+ + +......
T Consensus 175 ~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~ 254 (740)
T 4a5s_A 175 ALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPAS 254 (740)
T ss_dssp CEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHH
T ss_pred ceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCcc
Confidence 5899999999999875422 01588899988 7 3332221
Q ss_pred --ccccceeeeeECCCCCeEEEEcC--CCCceEEEEcC-CCc----e--EEEEeecCCCCcee-----EEEEccCCCeEE
Q 014755 175 --VDTLDLADIEWSPDDSAIVIWDS--PLEYKVLIYSP-DGR----C--LLKYQAYESGLGVK-----SISWSPCGQFLA 238 (419)
Q Consensus 175 --~~~~~v~~~~~~~~~~~l~~~~~--~~~~~i~~~d~-~~~----~--~~~~~~~~~~~~v~-----~~~~s~~~~~l~ 238 (419)
.+...+..++|+|||+.++.+.. ..+..|++||+ +++ + +..+....+...+. .++|+|||+.|+
T Consensus 255 ~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~ 334 (740)
T 4a5s_A 255 MLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFY 334 (740)
T ss_dssp HHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEE
T ss_pred CCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEE
Confidence 26677899999999997665432 22357999999 665 1 12221111222343 789999999877
Q ss_pred -EEEec---CcEEEEEcCCcee
Q 014755 239 -VGSYD---QTLRVLNHLTWKT 256 (419)
Q Consensus 239 -~~~~d---~~i~v~d~~~~~~ 256 (419)
..+.. ..|++||+.+++.
T Consensus 335 ~~~s~~~G~~~l~~~~~~~~~~ 356 (740)
T 4a5s_A 335 KIISNEEGYRHICYFQIDKKDC 356 (740)
T ss_dssp EEEECTTSCEEEEEEETTCSSC
T ss_pred EEEEcCCCceEEEEEECCCCce
Confidence 66543 3688888876544
No 155
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.95 E-value=8e-25 Score=191.28 Aligned_cols=281 Identities=12% Similarity=-0.005 Sum_probs=192.9
Q ss_pred EEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCC-ccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-ec
Q 014755 52 YIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGL-AGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQ 129 (419)
Q Consensus 52 ~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~ 129 (419)
.++++++++++++++.+ +.|++||+.+++.+..+..+. ..+..++|+|+++++++++...+.|.+||+.+++... +.
T Consensus 4 g~~~~~~~~~~v~~~~~-~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~ 82 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYP-NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN 82 (349)
T ss_dssp CCCCCTTCEEEEEEETT-TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred cccccCCCEEEEEeCCC-CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEE
Confidence 45678888888888866 899999999998877775443 2578899999999887766544599999999988776 33
Q ss_pred cCC------CCeeeEEEccCCCEEEEEeec---------CCCCeEEEEeccCCeE---EEEEeccccceeeeeECCCCCe
Q 014755 130 SPK------HASKGVAFTQDGKFAAICTRR---------DCKDYINLLSCHTWEI---MGVFAVDTLDLADIEWSPDDSA 191 (419)
Q Consensus 130 ~~~------~~~~~~~~~~~~~~l~~~~~~---------~~~g~v~i~d~~~~~~---~~~~~~~~~~v~~~~~~~~~~~ 191 (419)
... ..+..++|+|+|++++++..+ ...+.|.+||+.+++. +..+.. ...+.+++|+|+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~- 160 (349)
T 1jmx_B 83 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAADDGS- 160 (349)
T ss_dssp SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECTTSC-
T ss_pred cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CCcccceeECCCCc-
Confidence 222 236899999999999988743 0126999999988443 233333 34688899999999
Q ss_pred EEEEcCCCCceEEEEcC-CCceEEEEeecCCCC----------------------ceeEEEEccCCCeEEEEEe-cCcEE
Q 014755 192 IVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGL----------------------GVKSISWSPCGQFLAVGSY-DQTLR 247 (419)
Q Consensus 192 l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~----------------------~v~~~~~s~~~~~l~~~~~-d~~i~ 247 (419)
+++. ++.|++||+ +++....+....... ....+++++++........ ...+.
T Consensus 161 l~~~----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 236 (349)
T 1jmx_B 161 LYVA----GPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYL 236 (349)
T ss_dssp EEEE----SSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEE
T ss_pred EEEc----cCcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEE
Confidence 5552 234999999 777777665432000 2334555554422111111 11122
Q ss_pred EEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCC
Q 014755 248 VLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPT 327 (419)
Q Consensus 248 v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (419)
.+|..+++.. .+. ..
T Consensus 237 ~~~~~~~~~~-~~~---------------------------------------------------~~------------- 251 (349)
T 1jmx_B 237 SVDLKTGKTH-TQE---------------------------------------------------FA------------- 251 (349)
T ss_dssp EEETTTCCEE-EEE---------------------------------------------------EE-------------
T ss_pred EEeccCCcEE-ecc---------------------------------------------------cc-------------
Confidence 2444433211 100 00
Q ss_pred CCCCCCcceEEEEEcc-CCeEEEEecCCCCceEEEeeccCCCceeecccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 328 DKPNPKQGIGLMSWSS-DSQYICTRNDSMPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 328 ~~~~~~~~v~~~~~s~-~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
.+...+..++|+| ||++++++ + +.|++||+.+++....+.....+.+++|+|++++|++++.++.|++||++
T Consensus 252 ---~~~~~~~~~~~sp~dg~~l~~~--~--~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~ 324 (349)
T 1jmx_B 252 ---DLTELYFTGLRSPKDPNQIYGV--L--NRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPD 324 (349)
T ss_dssp ---ECSSCEEEEEECSSCTTEEEEE--E--SEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETT
T ss_pred ---cCCCcceeeEecCCCCCEEEEE--c--CeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEecCCCeEEEEecc
Confidence 0223467899999 99999888 5 89999999999887777666678899999999988888889999999999
Q ss_pred CCeEE
Q 014755 407 GAYCV 411 (419)
Q Consensus 407 ~~~~~ 411 (419)
+++.+
T Consensus 325 ~~~~~ 329 (349)
T 1jmx_B 325 TLEKV 329 (349)
T ss_dssp TTEEE
T ss_pred cccee
Confidence 87754
No 156
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.95 E-value=4.3e-24 Score=186.47 Aligned_cols=228 Identities=15% Similarity=0.137 Sum_probs=153.9
Q ss_pred EEEEEe-----CCeEEEE--ecCCCcEEE--EeecCcceeEEEEecCCCeEEEEecc--CCeEEEEEccCCcc--eeeee
Q 014755 21 YIAVAV-----DYRLVVR--DAHSFKVVQ--LFSCLDKISYIEWALDSEYILCGLYK--RLMIQAWSLTQPEW--TCKID 87 (419)
Q Consensus 21 ~la~~~-----~~~i~i~--~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~~~--~g~i~iw~~~~~~~--~~~~~ 87 (419)
.+++|+ ++.|.+| |.++++... ...+...+..++|+|||+ |++++.. ++.|++|++.+++. +..+.
T Consensus 4 ~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~ 82 (347)
T 3hfq_A 4 RILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVV 82 (347)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeee
Confidence 455553 3346665 555666544 345667788999999999 6655532 47999999987753 33334
Q ss_pred cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcC-CCeEEE---eccC---------CCCeeeEEEccCCCEEEEEeecC
Q 014755 88 EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLL-NTACVH---VQSP---------KHASKGVAFTQDGKFAAICTRRD 154 (419)
Q Consensus 88 ~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~-~~~~~~---~~~~---------~~~~~~~~~~~~~~~l~~~~~~~ 154 (419)
.+...+..++|+|+|++|++++..++.+.+|++. ++.... +... ...+.+++|+|+|+ ++++...
T Consensus 83 ~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~- 160 (347)
T 3hfq_A 83 APGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLG- 160 (347)
T ss_dssp EESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETT-
T ss_pred cCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCC-
Confidence 4667789999999999999998555599999996 333322 2111 12367899999999 5554432
Q ss_pred CCCeEEEEecc-CCeEEE--EEecc-ccceeeeeECCCCCeEEEEcCCCCceEEEEcCC---CceE--EEEeecCC----
Q 014755 155 CKDYINLLSCH-TWEIMG--VFAVD-TLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPD---GRCL--LKYQAYES---- 221 (419)
Q Consensus 155 ~~g~v~i~d~~-~~~~~~--~~~~~-~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~---~~~~--~~~~~~~~---- 221 (419)
.+.|++|++. +++... .+... ...+..++|+|||+++++.+ ..++.+.+|+++ ++.. ..+.....
T Consensus 161 -~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~-~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~ 238 (347)
T 3hfq_A 161 -SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAG-ELSSQIASLKYDTQTGAFTQLGIVKTIPADYTA 238 (347)
T ss_dssp -TTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEE-TTTTEEEEEEEETTTTEEEEEEEEESSCTTCCS
T ss_pred -CCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEe-CCCCEEEEEEecCCCCceEEeeeeeecCCCCCC
Confidence 3799999998 554332 22222 23577899999999877753 447899999883 4322 22222221
Q ss_pred CCceeEEEEccCCCeEEEE-EecCcEEEEEcCC
Q 014755 222 GLGVKSISWSPCGQFLAVG-SYDQTLRVLNHLT 253 (419)
Q Consensus 222 ~~~v~~~~~s~~~~~l~~~-~~d~~i~v~d~~~ 253 (419)
...+..++|+|+|++|+++ ..++.|.+|++..
T Consensus 239 ~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~ 271 (347)
T 3hfq_A 239 HNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTA 271 (347)
T ss_dssp CCEEEEEEECTTSCEEEEEEETTTEEEEEEECG
T ss_pred CCcceeEEECCCCCEEEEEeCCCCEEEEEEECC
Confidence 1358899999999987554 5578999999863
No 157
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.95 E-value=4.2e-24 Score=186.58 Aligned_cols=283 Identities=15% Similarity=0.192 Sum_probs=184.7
Q ss_pred eEEEEecc---CCeEEEEEcc--CCccee-eeecCCccEeEEEECCCCCEEEEEecC--CCeEEEEEcCCCeEEE---ec
Q 014755 61 YILCGLYK---RLMIQAWSLT--QPEWTC-KIDEGLAGIAYARWSPDSRHILTTSDF--QLRLTVWSLLNTACVH---VQ 129 (419)
Q Consensus 61 ~l~~~~~~---~g~i~iw~~~--~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~--~~~i~iwd~~~~~~~~---~~ 129 (419)
.+++++.. ++.|.+|+++ +++... ....+...+..++|+|+|+ |++++.. .+.|.+|++.+++... +.
T Consensus 4 ~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~ 82 (347)
T 3hfq_A 4 RILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVV 82 (347)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeee
Confidence 45555322 2467777665 454432 2334456678899999999 6666542 3499999998877544 33
Q ss_pred cCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC-C--eEEEEEecc---------ccceeeeeECCCCCeEEEEcC
Q 014755 130 SPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT-W--EIMGVFAVD---------TLDLADIEWSPDDSAIVIWDS 197 (419)
Q Consensus 130 ~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~-~--~~~~~~~~~---------~~~v~~~~~~~~~~~l~~~~~ 197 (419)
.+...+..++|+|++++|++++.. .+.|.+|++.. + +.+..+... ...+.+++|+|+|+ +++. .
T Consensus 83 ~~~~~p~~~a~spdg~~l~~~~~~--~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~-~ 158 (347)
T 3hfq_A 83 APGTPPAYVAVDEARQLVYSANYH--KGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVI-D 158 (347)
T ss_dssp EESCCCSEEEEETTTTEEEEEETT--TTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEE-E
T ss_pred cCCCCCEEEEECCCCCEEEEEeCC--CCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEE-e
Confidence 456678899999999999988743 37999999963 3 233333221 12478899999999 5554 3
Q ss_pred CCCceEEEEcCC--CceEEE--EeecCCCCceeEEEEccCCCeEEEE-EecCcEEEEEcCC--ceeeeeecccccccCCC
Q 014755 198 PLEYKVLIYSPD--GRCLLK--YQAYESGLGVKSISWSPCGQFLAVG-SYDQTLRVLNHLT--WKTFAEFMHLSTVRGPC 270 (419)
Q Consensus 198 ~~~~~i~~~d~~--~~~~~~--~~~~~~~~~v~~~~~s~~~~~l~~~-~~d~~i~v~d~~~--~~~~~~~~~~~~~~~~~ 270 (419)
..++.|++|++. ++.... +... ....+..++|+|+|++++++ ..++.|++|++.. ++...... ....
T Consensus 159 ~~~~~v~~~~~~~~g~~~~~~~~~~~-~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~-~~~~---- 232 (347)
T 3hfq_A 159 LGSDKVYVYNVSDAGQLSEQSVLTME-AGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGI-VKTI---- 232 (347)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEEECC-TTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEE-EESS----
T ss_pred CCCCEEEEEEECCCCcEEEeeeEEcC-CCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeee-eeec----
Confidence 457899999994 433222 1221 12257889999999977665 4578999999874 33211100 0000
Q ss_pred ccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEE
Q 014755 271 FPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICT 350 (419)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 350 (419)
+. .......+..++|+|||++|++
T Consensus 233 ----------~~----------------------------------------------~~~~~~~~~~i~~spdG~~l~v 256 (347)
T 3hfq_A 233 ----------PA----------------------------------------------DYTAHNGAAAIRLSHDGHFLYV 256 (347)
T ss_dssp ----------CT----------------------------------------------TCCSCCEEEEEEECTTSCEEEE
T ss_pred ----------CC----------------------------------------------CCCCCCcceeEEECCCCCEEEE
Confidence 00 0001234788999999998755
Q ss_pred e-cCCCCceEEEeeccC-CC--ceeec-ccCCCeeEEEeCCCCCeEEEEeC-CCcEEEe--ecCCCeEEe
Q 014755 351 R-NDSMPTTLWIWDICR-QE--PAAIL-VQKDPIRAATWDPTCTRLVLCTG-SSHLYMW--TPSGAYCVS 412 (419)
Q Consensus 351 ~-~~d~~~~i~iwd~~~-~~--~~~~~-~~~~~v~~~~~s~~~~~l~s~~~-dg~i~vw--~~~~~~~~~ 412 (419)
+ ..+ +.|.+|++.. ++ .+... .+...+..++|+|||++|++++. ++.|.+| |.+++++..
T Consensus 257 ~~~~~--~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 257 SNRGY--NTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp EEETT--TEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred EeCCC--CEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEe
Confidence 4 446 9999999973 33 22222 25667899999999998888775 4899999 555676653
No 158
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.94 E-value=2e-25 Score=198.66 Aligned_cols=305 Identities=13% Similarity=0.099 Sum_probs=208.8
Q ss_pred ccCeEEcCCCCEEEEEeC----CeEEEEecCCCcEEEEeecCccee-EEEEecCCCeEEEEeccCCeEEEEEccCCccee
Q 014755 10 TGPSCFSPNARYIAVAVD----YRLVVRDAHSFKVVQLFSCLDKIS-YIEWALDSEYILCGLYKRLMIQAWSLTQPEWTC 84 (419)
Q Consensus 10 ~~~~~~s~d~~~la~~~~----~~i~i~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~ 84 (419)
...++|||||++||+..+ ..|++||+.+++..++..+..... .+.|+|||++|++++.+ +.|++||+.+++...
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~-~~l~~~d~~~~~~~~ 116 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNE-LNLMKVDLETLEEQV 116 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETT-TEEEEEETTTCCEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcC-CcEEEEECCCCCcEE
Confidence 344789999999998863 268999999998777665544433 48899999999999876 689999999887654
Q ss_pred eeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEee--cCCCCeEEEE
Q 014755 85 KIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTR--RDCKDYINLL 162 (419)
Q Consensus 85 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~g~v~i~ 162 (419)
....+.. |+++|+.|+....+. ...+|. ..+.|+|+++.+++... ......|++|
T Consensus 117 ~~~~~~~------~~~~g~~l~~~~~~~-~~~~~~----------------~~~~~spdg~~~~~~~~~~~~~~~~l~~~ 173 (396)
T 3c5m_A 117 IYTVDEE------WKGYGTWVANSDCTK-LVGIEI----------------LKRDWQPLTSWEKFAEFYHTNPTCRLIKV 173 (396)
T ss_dssp EEECCTT------EEEEEEEEECTTSSE-EEEEEE----------------EGGGCCCCCSHHHHHHHHHTCCCEEEEEE
T ss_pred EEecccc------cCCCCCEEEeccCCc-cccccc----------------cccccCCCCcceeeeeeccCCCcceEEEE
Confidence 4433332 677888777766544 444443 13457888887776531 1112589999
Q ss_pred eccCCeEEEEEeccccceeeeeECC-CCCeEEEEcCCCC----ceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeE
Q 014755 163 SCHTWEIMGVFAVDTLDLADIEWSP-DDSAIVIWDSPLE----YKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFL 237 (419)
Q Consensus 163 d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~----~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 237 (419)
|+.+++..... .+...+..+.|+| +++.+++...... ..|++||+.+.....+..+.....+..++|+|+|++|
T Consensus 174 d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l 252 (396)
T 3c5m_A 174 DIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAM 252 (396)
T ss_dssp ETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCE
T ss_pred ECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEE
Confidence 99988765544 4556788999999 7887766433222 5799999855544444332212257889999999988
Q ss_pred EEEEec-----CcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEE
Q 014755 238 AVGSYD-----QTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYE 312 (419)
Q Consensus 238 ~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (419)
+..+.+ +.|++||+.+++.......
T Consensus 253 ~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-------------------------------------------------- 282 (396)
T 3c5m_A 253 AYVSYFKGQTDRVIYKANPETLENEEVMVM-------------------------------------------------- 282 (396)
T ss_dssp EEEEEETTTCCEEEEEECTTTCCEEEEEEC--------------------------------------------------
T ss_pred EEEecCCCCccceEEEEECCCCCeEEeeeC--------------------------------------------------
Confidence 887765 4599999887654322110
Q ss_pred eccCCCCCCCCCCCCCCCCCCcceEEEEEcc-CCeEEEEecCC--------------CCceEEEeeccCCCceeecccCC
Q 014755 313 VMEIPISLPFQKPPTDKPNPKQGIGLMSWSS-DSQYICTRNDS--------------MPTTLWIWDICRQEPAAILVQKD 377 (419)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~d--------------~~~~i~iwd~~~~~~~~~~~~~~ 377 (419)
. ... +.|+| ||+++++++.+ .+..|++||+.+++...+..+..
T Consensus 283 -------------------~--~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~ 340 (396)
T 3c5m_A 283 -------------------P--PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHST 340 (396)
T ss_dssp -------------------C--SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCC
T ss_pred -------------------C--CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCC
Confidence 0 022 78999 99988875421 12789999999888766655554
Q ss_pred -----------CeeEEEeCCCCCeEEEEeC-CCcEEEe--ecCCCeEE
Q 014755 378 -----------PIRAATWDPTCTRLVLCTG-SSHLYMW--TPSGAYCV 411 (419)
Q Consensus 378 -----------~v~~~~~s~~~~~l~s~~~-dg~i~vw--~~~~~~~~ 411 (419)
.+..++|+|||+.|+.++. ++...+| ++.+++..
T Consensus 341 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~~ 388 (396)
T 3c5m_A 341 SWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYKH 388 (396)
T ss_dssp CCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC-
T ss_pred ccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcccccc
Confidence 2677899999998887765 5555555 44555443
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.94 E-value=8e-23 Score=179.42 Aligned_cols=294 Identities=12% Similarity=0.080 Sum_probs=196.5
Q ss_pred EcCCCCEEEEEe-----CCeEEEEec--CCCcEEEEee-cCcceeEEEEecCCCeEEEEecc---CCeEEEEEccC--Cc
Q 014755 15 FSPNARYIAVAV-----DYRLVVRDA--HSFKVVQLFS-CLDKISYIEWALDSEYILCGLYK---RLMIQAWSLTQ--PE 81 (419)
Q Consensus 15 ~s~d~~~la~~~-----~~~i~i~~~--~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~---~g~i~iw~~~~--~~ 81 (419)
..++..++++|+ ++.|.+|++ ++++...... +...+..++|+|||++|++++.+ ++.|.+|++.. ++
T Consensus 9 ~~~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~ 88 (361)
T 3scy_A 9 TTDSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGT 88 (361)
T ss_dssp GGGGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTE
T ss_pred hCCCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCc
Confidence 344455666664 356888855 5666544322 67778899999999999998863 36999999876 43
Q ss_pred c--eeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-e------cc--------CCCCeeeEEEccCC
Q 014755 82 W--TCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-V------QS--------PKHASKGVAFTQDG 144 (419)
Q Consensus 82 ~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~------~~--------~~~~~~~~~~~~~~ 144 (419)
. +.....+......+++ ++++|++++..++.+.+|++.....+. + .. ....+.+++|+|+|
T Consensus 89 ~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg 166 (361)
T 3scy_A 89 LHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDG 166 (361)
T ss_dssp EEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTS
T ss_pred EEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCC
Confidence 2 2223334456777887 889888888655699999997532211 1 11 11224779999999
Q ss_pred CEEEEEeecCCCCeEEEEeccCCe-------E------EEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CC
Q 014755 145 KFAAICTRRDCKDYINLLSCHTWE-------I------MGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DG 210 (419)
Q Consensus 145 ~~l~~~~~~~~~g~v~i~d~~~~~-------~------~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~ 210 (419)
++++++... .+.|++|++.... . ..........+..++|+|+|+++++.+ ..++.|.+|++ ++
T Consensus 167 ~~l~~~~~~--~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~-~~~~~v~v~~~~~g 243 (361)
T 3scy_A 167 KYLLADDLG--TDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLIN-EIGGTVIAFRYADG 243 (361)
T ss_dssp SEEEEEETT--TTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE-TTTCEEEEEEEETT
T ss_pred CEEEEEeCC--CCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEc-CCCCeEEEEEecCC
Confidence 988777643 3799999887533 1 111222345678999999999888753 34789999999 55
Q ss_pred ceE--EEEeec-CCCCceeEEEEccCCCeEEEEEec--CcEEEEEcC--Ccee--eeeecccccccCCCccceeccCCCc
Q 014755 211 RCL--LKYQAY-ESGLGVKSISWSPCGQFLAVGSYD--QTLRVLNHL--TWKT--FAEFMHLSTVRGPCFPAVFKEVDEP 281 (419)
Q Consensus 211 ~~~--~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d--~~i~v~d~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (419)
+.. ..+... .+...+..++|+|||++|+++..+ +.|.+|++. +++. +..+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~-------------------- 303 (361)
T 3scy_A 244 MLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL-------------------- 303 (361)
T ss_dssp EEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE--------------------
T ss_pred ceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec--------------------
Confidence 432 222221 112346799999999998776654 789999985 3332 11111
Q ss_pred ccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEec-CCCCceEE
Q 014755 282 LQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRN-DSMPTTLW 360 (419)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-~d~~~~i~ 360 (419)
....+..++|+|||++|++++ .+ +.|.
T Consensus 304 --------------------------------------------------~g~~~~~~~~spdg~~l~~~~~~~--~~v~ 331 (361)
T 3scy_A 304 --------------------------------------------------TGIHPRNFIITPNGKYLLVACRDT--NVIQ 331 (361)
T ss_dssp --------------------------------------------------CSSCCCEEEECTTSCEEEEEETTT--TEEE
T ss_pred --------------------------------------------------CCCCCceEEECCCCCEEEEEECCC--CCEE
Confidence 011246799999999988887 45 8999
Q ss_pred Ee--eccCCCceeecc--cCCCeeEEEeC
Q 014755 361 IW--DICRQEPAAILV--QKDPIRAATWD 385 (419)
Q Consensus 361 iw--d~~~~~~~~~~~--~~~~v~~~~~s 385 (419)
+| |..++++..... +...+.|+.|.
T Consensus 332 v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 332 IFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred EEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 96 455677665542 55678899885
No 160
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.94 E-value=2e-24 Score=191.59 Aligned_cols=243 Identities=13% Similarity=0.016 Sum_probs=169.9
Q ss_pred eEEcCCCCEEEEEeC--C--eEEEEecCCCcEEEEeec-CcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeee
Q 014755 13 SCFSPNARYIAVAVD--Y--RLVVRDAHSFKVVQLFSC-LDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKID 87 (419)
Q Consensus 13 ~~~s~d~~~la~~~~--~--~i~i~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~ 87 (419)
.+|||||++||++++ + .|++||+.+++..++..+ ...+..+.|+|||+.|++++.+ +.|++||+.+++......
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~-~~l~~~d~~~g~~~~~~~ 119 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG-RNLMRVDLATLEENVVYQ 119 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT-TEEEEEETTTCCEEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC-CeEEEEECCCCcceeeee
Confidence 679999999999974 3 399999999998887654 3445578999999999999866 699999999998766555
Q ss_pred cCCccEeEE--EECCCCCEEEEEe---------------------cCCCeEEEEEcCCCeEEEeccCCCCeeeEEEcc-C
Q 014755 88 EGLAGIAYA--RWSPDSRHILTTS---------------------DFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQ-D 143 (419)
Q Consensus 88 ~~~~~v~~~--~~~~~~~~l~~~~---------------------~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~ 143 (419)
.+...+... .++|+++.++... .....|.+||+.+++...+..+...+..++|+| |
T Consensus 120 ~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~d 199 (388)
T 3pe7_A 120 VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYD 199 (388)
T ss_dssp CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTE
T ss_pred chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCC
Confidence 555544433 3489999887532 122389999999998877766677789999999 9
Q ss_pred CCEEEEEeecCC---CCeEEEEeccCCeEEEEEeccc--cceeeeeECCCCCeEEEEcCCC---CceEEEEcC-CCceEE
Q 014755 144 GKFAAICTRRDC---KDYINLLSCHTWEIMGVFAVDT--LDLADIEWSPDDSAIVIWDSPL---EYKVLIYSP-DGRCLL 214 (419)
Q Consensus 144 ~~~l~~~~~~~~---~g~v~i~d~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~~~---~~~i~~~d~-~~~~~~ 214 (419)
|+.|++...... ...|+++|+..++.. .+..+. ..+..+.|+|||+.|++..... +..|++||+ +++...
T Consensus 200 g~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~ 278 (388)
T 3pe7_A 200 DSTVAFCHEGPHDLVDARMWLINEDGTNMR-KVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQ 278 (388)
T ss_dssp EEEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEE
T ss_pred CCEEEEEEecCCCCCcceEEEEeCCCCceE-EeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEE
Confidence 999988775321 247888888765443 333333 3577889999999886532221 234999999 555322
Q ss_pred EEeecC--CC-CceeEEEEccCCCeEEEE---------EecCcEEEEEcCCceee
Q 014755 215 KYQAYE--SG-LGVKSISWSPCGQFLAVG---------SYDQTLRVLNHLTWKTF 257 (419)
Q Consensus 215 ~~~~~~--~~-~~v~~~~~s~~~~~l~~~---------~~d~~i~v~d~~~~~~~ 257 (419)
...... +. .....++|+|||+.|+.. ..+..|++||+.+++..
T Consensus 279 l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~ 333 (388)
T 3pe7_A 279 LTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQH 333 (388)
T ss_dssp EEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEE
T ss_pred EEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceE
Confidence 222111 00 002234799999988764 34568999999887653
No 161
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.93 E-value=4.6e-25 Score=211.49 Aligned_cols=283 Identities=12% Similarity=0.071 Sum_probs=193.8
Q ss_pred eEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCc---cEeEEEECCCCCEEEEEec---------CCCeEEEE
Q 014755 51 SYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLA---GIAYARWSPDSRHILTTSD---------FQLRLTVW 118 (419)
Q Consensus 51 ~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~---------~~~~i~iw 118 (419)
.+++|+|||++++++ .+ ++|++||+.+++....+..+.. .+.+++|||||++|++++. ++ .|++|
T Consensus 19 ~~~~~s~dg~~~~~~-~d-~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~-~i~~~ 95 (719)
T 1z68_A 19 FFPNWISGQEYLHQS-AD-NNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTA-TYYIY 95 (719)
T ss_dssp CCCEESSSSEEEEEC-TT-SCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEE-EEEEE
T ss_pred CccEECCCCeEEEEc-CC-CCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecce-EEEEE
Confidence 478999999655544 45 8999999999987655544433 3899999999999999875 44 99999
Q ss_pred EcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEe-ccccc-----------------e
Q 014755 119 SLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFA-VDTLD-----------------L 180 (419)
Q Consensus 119 d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~-~~~~~-----------------v 180 (419)
|+.+++..........+..++|||||+.|+++.. +.|++||+.+++..+... ++... .
T Consensus 96 d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~~----~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~ 171 (719)
T 1z68_A 96 DLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVYQ----NNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATK 171 (719)
T ss_dssp ETTTTEECCSSCCCSSBCCEEECSSTTCEEEEET----TEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSS
T ss_pred ECCCCccccceecCcccccceECCCCCEEEEEEC----CeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCc
Confidence 9999987321112356889999999999999863 699999998877654321 22111 1
Q ss_pred eeeeECCCCCeEEEEcCC--------------------------------CCceEEEEcCC-CceE--EEEee----cCC
Q 014755 181 ADIEWSPDDSAIVIWDSP--------------------------------LEYKVLIYSPD-GRCL--LKYQA----YES 221 (419)
Q Consensus 181 ~~~~~~~~~~~l~~~~~~--------------------------------~~~~i~~~d~~-~~~~--~~~~~----~~~ 221 (419)
.+++|+|||+.|++.... ....|++||+. ++.. ..+.. ..+
T Consensus 172 ~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 251 (719)
T 1z68_A 172 YALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASS 251 (719)
T ss_dssp CCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTS
T ss_pred ccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCC
Confidence 489999999999874321 11278999994 4331 12211 123
Q ss_pred CCceeEEEEccCCCeEEEEEecC----cEEEEE----cCCceeeeeecccccccCCCccceeccCCCcccccceeeeccC
Q 014755 222 GLGVKSISWSPCGQFLAVGSYDQ----TLRVLN----HLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLND 293 (419)
Q Consensus 222 ~~~v~~~~~s~~~~~l~~~~~d~----~i~v~d----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (419)
...+..++|+||++++++....+ .|++|| +.+++....+....
T Consensus 252 ~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~----------------------------- 302 (719)
T 1z68_A 252 DYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIE----------------------------- 302 (719)
T ss_dssp CEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEE-----------------------------
T ss_pred cceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEeccc-----------------------------
Confidence 33789999999988777654332 488899 77776544331000
Q ss_pred ccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceE-----EEEEccCCeEEEE--ecCCCCceEEEeeccC
Q 014755 294 DFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIG-----LMSWSSDSQYICT--RNDSMPTTLWIWDICR 366 (419)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-----~~~~s~~g~~l~~--~~~d~~~~i~iwd~~~ 366 (419)
..|...+. .++|||||+.++. ...+....|++||+.+
T Consensus 303 ------------------------------------~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~ 346 (719)
T 1z68_A 303 ------------------------------------ESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTV 346 (719)
T ss_dssp ------------------------------------ECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCS
T ss_pred ------------------------------------ccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCC
Confidence 01222232 5789999996655 3333124688889888
Q ss_pred CCceeecccCCCeeEEEeCCCCCeEEEEeCC-----CcEEEeecC
Q 014755 367 QEPAAILVQKDPIRAATWDPTCTRLVLCTGS-----SHLYMWTPS 406 (419)
Q Consensus 367 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-----g~i~vw~~~ 406 (419)
++...+..+...+..+.++ +++.|+..+.+ +..++|.+.
T Consensus 347 ~~~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~ 390 (719)
T 1z68_A 347 ENAIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRIS 390 (719)
T ss_dssp TTCEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEE
T ss_pred CceEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEe
Confidence 8766665566678888777 88877666654 889999876
No 162
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.93 E-value=2.6e-22 Score=176.15 Aligned_cols=288 Identities=13% Similarity=0.098 Sum_probs=189.6
Q ss_pred cCCCeEEEEecc---CCeEEEEEcc--CCcceeeeecCCccEeEEEECCCCCEEEEEecC---CCeEEEEEcCC--CeEE
Q 014755 57 LDSEYILCGLYK---RLMIQAWSLT--QPEWTCKIDEGLAGIAYARWSPDSRHILTTSDF---QLRLTVWSLLN--TACV 126 (419)
Q Consensus 57 ~~~~~l~~~~~~---~g~i~iw~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~---~~~i~iwd~~~--~~~~ 126 (419)
+...++++|+.. ++.|.+|+++ +++.......+...+..++|+|++++|++++.+ .+.+.+|++.. ++..
T Consensus 11 ~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~ 90 (361)
T 3scy_A 11 DSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLH 90 (361)
T ss_dssp GGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEE
T ss_pred CCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEE
Confidence 344566666532 3578998774 455433222255667889999999999999874 34999998875 5544
Q ss_pred E---eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEE----e--c--------cccceeeeeECCCC
Q 014755 127 H---VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVF----A--V--------DTLDLADIEWSPDD 189 (419)
Q Consensus 127 ~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~----~--~--------~~~~v~~~~~~~~~ 189 (419)
. ..........+++ ++++++++... .+.|.+|++.....+..+ . + +...+.+++|+|+|
T Consensus 91 ~~~~~~~~~~~p~~~~~--dg~~l~~~~~~--~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg 166 (361)
T 3scy_A 91 LLNTQKTMGADPCYLTT--NGKNIVTANYS--GGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDG 166 (361)
T ss_dssp EEEEEECSSSCEEEEEE--CSSEEEEEETT--TTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTS
T ss_pred EeeEeccCCCCcEEEEE--CCCEEEEEECC--CCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCC
Confidence 3 2334445667777 88888887754 379999999753322111 1 1 11235789999999
Q ss_pred CeEEEEcCCCCceEEEEcCC--C-----c-eE-----EEEeecCCCCceeEEEEccCCCeEEEEE-ecCcEEEEEcCCce
Q 014755 190 SAIVIWDSPLEYKVLIYSPD--G-----R-CL-----LKYQAYESGLGVKSISWSPCGQFLAVGS-YDQTLRVLNHLTWK 255 (419)
Q Consensus 190 ~~l~~~~~~~~~~i~~~d~~--~-----~-~~-----~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~v~d~~~~~ 255 (419)
+++++.+ ..++.+.+|+++ + + .. ..... .....+..++|+|+|+++++++ .++.|.+|++.+++
T Consensus 167 ~~l~~~~-~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~ 244 (361)
T 3scy_A 167 KYLLADD-LGTDQIHKFNINPNANADNKEKFLTKGTPEAFKV-APGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGM 244 (361)
T ss_dssp SEEEEEE-TTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEEC-CTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTE
T ss_pred CEEEEEe-CCCCEEEEEEEcCCCCcccccceeecccccceec-CCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCc
Confidence 9887754 347899999872 2 2 21 12222 1223678999999999888777 58899999998665
Q ss_pred eeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcc
Q 014755 256 TFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQG 335 (419)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (419)
......... ...+...
T Consensus 245 ~~~~~~~~~----------------------------------------------------------------~~~~~~~ 260 (361)
T 3scy_A 245 LDEIQTVAA----------------------------------------------------------------DTVNAQG 260 (361)
T ss_dssp EEEEEEEES----------------------------------------------------------------CSSCCCC
T ss_pred eEEeEEEec----------------------------------------------------------------CCCCCCC
Confidence 322111000 0012334
Q ss_pred eEEEEEccCCeEEEEecCCCCceEEEeecc--CCCcee--ecccCCCeeEEEeCCCCCeEEEEe-CCCcEEEeec--CCC
Q 014755 336 IGLMSWSSDSQYICTRNDSMPTTLWIWDIC--RQEPAA--ILVQKDPIRAATWDPTCTRLVLCT-GSSHLYMWTP--SGA 408 (419)
Q Consensus 336 v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~--~~~~~~--~~~~~~~v~~~~~s~~~~~l~s~~-~dg~i~vw~~--~~~ 408 (419)
...++|+|||++|+++..+.++.|.+|++. ++++.. .......+.+++|+|||++|++++ .++.|.+|++ +++
T Consensus 261 ~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g 340 (361)
T 3scy_A 261 SGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATG 340 (361)
T ss_dssp EEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTC
T ss_pred cccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCC
Confidence 578999999998866543112899999996 455332 222355788999999999888887 6789999654 577
Q ss_pred eEEecC
Q 014755 409 YCVSNP 414 (419)
Q Consensus 409 ~~~~~~ 414 (419)
++..+.
T Consensus 341 ~~~~~~ 346 (361)
T 3scy_A 341 LLTDIK 346 (361)
T ss_dssp CEEECS
T ss_pred cEeecc
Confidence 776553
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.93 E-value=9.2e-23 Score=179.04 Aligned_cols=288 Identities=10% Similarity=0.079 Sum_probs=188.0
Q ss_pred eEEEEeccC-CeEEEEEc--cCCcceee--ee-cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcC-CCeEEEeccC--
Q 014755 61 YILCGLYKR-LMIQAWSL--TQPEWTCK--ID-EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLL-NTACVHVQSP-- 131 (419)
Q Consensus 61 ~l~~~~~~~-g~i~iw~~--~~~~~~~~--~~-~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~-~~~~~~~~~~-- 131 (419)
++++|+... +.|.+|++ .+++.... .. .....+..++|+|++++|++++.+ .|.+|++. +++...+..+
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~--~v~~~~~~~~g~~~~~~~~~~ 81 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK--KWSSFAVKSPTEIVHEASHPI 81 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT--EEEEEEEEETTEEEEEEEEEC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc--eEEEEEECCCCCEEEeeEeec
Confidence 455666532 46877765 45543221 11 233467899999999999888875 89999997 7776542211
Q ss_pred CCCeeeEEEccCCCE--EEEEe------ecC----CCCeEEEEecc-CCeEEEEEec----cccceeeeeECCCCCeEEE
Q 014755 132 KHASKGVAFTQDGKF--AAICT------RRD----CKDYINLLSCH-TWEIMGVFAV----DTLDLADIEWSPDDSAIVI 194 (419)
Q Consensus 132 ~~~~~~~~~~~~~~~--l~~~~------~~~----~~g~v~i~d~~-~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~ 194 (419)
.....+++|+|+|++ ++++. ... ..+.+.+|++. .++....+.. +...+.+++|+|||+++++
T Consensus 82 ~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~ 161 (365)
T 1jof_A 82 GGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYS 161 (365)
T ss_dssp CSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred CCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEE
Confidence 133667899999985 33432 000 13789999997 4665544432 3467899999999999887
Q ss_pred EcCCCCceEEEEcCC--CceEE--EEeecCCCCceeEEEEccCCCeEEEEEe-cCcEEEEEcC--Cceeeeeeccccccc
Q 014755 195 WDSPLEYKVLIYSPD--GRCLL--KYQAYESGLGVKSISWSPCGQFLAVGSY-DQTLRVLNHL--TWKTFAEFMHLSTVR 267 (419)
Q Consensus 195 ~~~~~~~~i~~~d~~--~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d~~i~v~d~~--~~~~~~~~~~~~~~~ 267 (419)
.+. .++.|++|++. ++... .+....+...+..++|+|+|+++++++. ++.|.+|++. +++..........+
T Consensus 162 ~~~-~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~- 239 (365)
T 1jof_A 162 ADL-TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLI- 239 (365)
T ss_dssp EET-TTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESS-
T ss_pred EcC-CCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcC-
Confidence 553 35799999984 54432 2221111236899999999999988775 6789999865 44432111000000
Q ss_pred CCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCc------ceEEEE-
Q 014755 268 GPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQ------GIGLMS- 340 (419)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~v~~~~- 340 (419)
|. ...+|.. .+..++
T Consensus 240 -------------~~---------------------------------------------~~~g~~~~~~~~~~~~~i~~ 261 (365)
T 1jof_A 240 -------------PP---------------------------------------------GIPDRDPETGKGLYRADVCA 261 (365)
T ss_dssp -------------CT---------------------------------------------TCCCBCTTTSSBSEEEEEEE
T ss_pred -------------CC---------------------------------------------CcCCcccccccccccccEEE
Confidence 00 0001121 478899
Q ss_pred EccCCeEEEEecCCCC----ceEEEeecc-CCCceee---cc-cCCCeeEEEeCC---CCCeEEEEeCC-CcEEEeecCC
Q 014755 341 WSSDSQYICTRNDSMP----TTLWIWDIC-RQEPAAI---LV-QKDPIRAATWDP---TCTRLVLCTGS-SHLYMWTPSG 407 (419)
Q Consensus 341 ~s~~g~~l~~~~~d~~----~~i~iwd~~-~~~~~~~---~~-~~~~v~~~~~s~---~~~~l~s~~~d-g~i~vw~~~~ 407 (419)
|||||++|++++.+.+ +.|.+|++. ++++... .. +...+..++|+| ||++|++++.+ +.|.+|+++.
T Consensus 262 ~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 262 LTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp ECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEET
T ss_pred ECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEch
Confidence 9999999887754311 289999996 6765542 32 555678899999 89999988864 8999999986
Q ss_pred CeE
Q 014755 408 AYC 410 (419)
Q Consensus 408 ~~~ 410 (419)
..+
T Consensus 342 ~~l 344 (365)
T 1jof_A 342 EFL 344 (365)
T ss_dssp TEE
T ss_pred hhC
Confidence 543
No 164
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.92 E-value=1.7e-22 Score=191.94 Aligned_cols=238 Identities=11% Similarity=0.036 Sum_probs=169.5
Q ss_pred eEEcCCCCEEEEE--e-CCeEEEEec-CCCcEEEEeecCccee---------EEEEe--cCCCe-EEEEeccCCeEEEEE
Q 014755 13 SCFSPNARYIAVA--V-DYRLVVRDA-HSFKVVQLFSCLDKIS---------YIEWA--LDSEY-ILCGLYKRLMIQAWS 76 (419)
Q Consensus 13 ~~~s~d~~~la~~--~-~~~i~i~~~-~~~~~~~~~~~~~~v~---------~~~~s--~~~~~-l~~~~~~~g~i~iw~ 76 (419)
++|++++-+++.. + ++...||.. .+++..++..+...+. ...|+ |||+. |++++..+..|.+++
T Consensus 29 ~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~ 108 (662)
T 3azo_A 29 VGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFE 108 (662)
T ss_dssp EEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEEC
T ss_pred eEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEc
Confidence 7889876666655 3 567888874 4555555556666666 67676 99999 888775446777777
Q ss_pred cc--C-Ccceeeeec-----CCccEeEEEECCCCCEEEEEecCC---------CeEEEEEcCC------CeEEEec-cCC
Q 014755 77 LT--Q-PEWTCKIDE-----GLAGIAYARWSPDSRHILTTSDFQ---------LRLTVWSLLN------TACVHVQ-SPK 132 (419)
Q Consensus 77 ~~--~-~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~~~---------~~i~iwd~~~------~~~~~~~-~~~ 132 (419)
+. + ++ ...+.. +...+..++|+|||+.|++++.+. ..|++||+.+ ++...+. .+.
T Consensus 109 ~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~ 187 (662)
T 3azo_A 109 PDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAH 187 (662)
T ss_dssp TTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCS
T ss_pred CCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCC
Confidence 65 3 43 445555 566789999999999999988651 2799999998 7766665 556
Q ss_pred CCeeeEEEccCCCEEEEEeecC-----CCCeEEEEecc-CC---eEEEEEeccccceeeeeECCCCCeEEEEcCCCCc--
Q 014755 133 HASKGVAFTQDGKFAAICTRRD-----CKDYINLLSCH-TW---EIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEY-- 201 (419)
Q Consensus 133 ~~~~~~~~~~~~~~l~~~~~~~-----~~g~v~i~d~~-~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~-- 201 (419)
..+..++|+|||++|++++.+. ....|++||+. ++ +.......+...+..+.|+|||+++++.+ .++
T Consensus 188 ~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~--~~~~~ 265 (662)
T 3azo_A 188 RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATD--RTGWW 265 (662)
T ss_dssp SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEEC--TTSSC
T ss_pred CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEEC--CCCCe
Confidence 6778899999999999888653 11479999999 56 44444444567899999999999665533 345
Q ss_pred eEEEEcC-CCceEEEEeecCCCC-------ceeEEEEccCCCeEEEEEecCcEEEE--EcCCce
Q 014755 202 KVLIYSP-DGRCLLKYQAYESGL-------GVKSISWSPCGQFLAVGSYDQTLRVL--NHLTWK 255 (419)
Q Consensus 202 ~i~~~d~-~~~~~~~~~~~~~~~-------~v~~~~~s~~~~~l~~~~~d~~i~v~--d~~~~~ 255 (419)
.|++||+ +++.. .+....... .+..++|+|+++++++++. +.++|| |+.+++
T Consensus 266 ~l~~~~~~~~~~~-~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 266 NLHRVDPATGAAT-QLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE 327 (662)
T ss_dssp EEEEECTTTCCEE-ESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE
T ss_pred EEEEEECCCCcee-ecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc
Confidence 7888888 55443 332221110 1567899999999999988 999998 544444
No 165
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.92 E-value=4.5e-22 Score=173.75 Aligned_cols=291 Identities=11% Similarity=0.036 Sum_probs=203.9
Q ss_pred CCCCEEEEEe-------CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEec---------cCCeEEEEEccCC
Q 014755 17 PNARYIAVAV-------DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLY---------KRLMIQAWSLTQP 80 (419)
Q Consensus 17 ~d~~~la~~~-------~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---------~~g~i~iw~~~~~ 80 (419)
++++++++.. ++.|.+||..+++.+..+.-...- .++|+|||++++++.. .++.|.+||..++
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 4777777764 458999999999988776533333 8999999999998863 1258999999998
Q ss_pred cceeeeecC------CccEeEEEECCCCCEEEEEecC-CCeEEEEEcCCCeEEEe-ccCCCCeeeEEEccCC-CEEEEEe
Q 014755 81 EWTCKIDEG------LAGIAYARWSPDSRHILTTSDF-QLRLTVWSLLNTACVHV-QSPKHASKGVAFTQDG-KFAAICT 151 (419)
Q Consensus 81 ~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~~-~~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~-~~l~~~~ 151 (419)
+.+..+... ......++++|||++|+++... .+.|.+||+++++.+.. .... ....+.+.|++ ..+++.+
T Consensus 92 ~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~-~~~~v~~~p~~~~~~~~~~ 170 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA-GCWSVIPQPNRPRSFMTIC 170 (361)
T ss_dssp CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT-TEEEEEECTTSSSEEEEEE
T ss_pred cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC-CcceeEEcCCCCeeEEEEC
Confidence 887776532 2346789999999999998753 34999999999987664 3332 22335677776 5555555
Q ss_pred ecCCCCeEEEEeccC-CeEEEEE------eccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceE---EEEeecC-
Q 014755 152 RRDCKDYINLLSCHT-WEIMGVF------AVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCL---LKYQAYE- 220 (419)
Q Consensus 152 ~~~~~g~v~i~d~~~-~~~~~~~------~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~---~~~~~~~- 220 (419)
.+ |.+.+++... ++..... .....+ ..+.++|++..+++. ..++.++++|+..... ..+....
T Consensus 171 ~d---g~~~~v~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~--~~~~~v~v~d~~~~~~~~~~~~~~~~~ 244 (361)
T 2oiz_A 171 GD---GGLLTINLGEDGKVASQSRSKQMFSVKDDP-IFIAPALDKDKAHFV--SYYGNVYSADFSGDEVKVDGPWSLLND 244 (361)
T ss_dssp TT---SSEEEEEECTTSSEEEEEECCCCSCTTTSC-BCSCCEECSSEEEEE--BTTSEEEEEECSSSSCEEEEEEESCCH
T ss_pred CC---CcEEEEEECCCCcEeeeccccceEcCCCCc-eEEEecccCCEEEEE--eCCCeEEEEEecCCCceecccccccCc
Confidence 54 7888888765 5544221 111111 234446777776663 3468899999833222 2221100
Q ss_pred -----C--CCceeEEEEccCCCeEEEEEe-----------cCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcc
Q 014755 221 -----S--GLGVKSISWSPCGQFLAVGSY-----------DQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPL 282 (419)
Q Consensus 221 -----~--~~~v~~~~~s~~~~~l~~~~~-----------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (419)
. ......++|+|+++.++++.. .+.|.+||+.+++.+..+..
T Consensus 245 ~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~-------------------- 304 (361)
T 2oiz_A 245 EDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPG-------------------- 304 (361)
T ss_dssp HHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEEC--------------------
T ss_pred cccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEec--------------------
Confidence 0 001223789999888877654 34799999999988877641
Q ss_pred cccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEe
Q 014755 283 QLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIW 362 (419)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iw 362 (419)
+. ...++|+|||++|++++. +.|.+|
T Consensus 305 -------------------------------------------------~~--p~~ia~spdg~~l~v~n~---~~v~v~ 330 (361)
T 2oiz_A 305 -------------------------------------------------RD--ALSMTIDQQRNLMLTLDG---GNVNVY 330 (361)
T ss_dssp -------------------------------------------------TT--CCEEEEETTTTEEEEECS---SCEEEE
T ss_pred -------------------------------------------------CC--eeEEEECCCCCEEEEeCC---CeEEEE
Confidence 22 568999999999988774 899999
Q ss_pred eccCC--Cceeec-ccCCCeeEEEeCCCCC
Q 014755 363 DICRQ--EPAAIL-VQKDPIRAATWDPTCT 389 (419)
Q Consensus 363 d~~~~--~~~~~~-~~~~~v~~~~~s~~~~ 389 (419)
|..++ +++..+ .+......++++|+|+
T Consensus 331 D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 331 DISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp ECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred ECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 99999 877775 6788889999999986
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.92 E-value=1.2e-22 Score=194.76 Aligned_cols=289 Identities=10% Similarity=0.059 Sum_probs=195.3
Q ss_pred cceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCcc-----EeEEEECCCCCEEEEEecCC--------Ce
Q 014755 48 DKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAG-----IAYARWSPDSRHILTTSDFQ--------LR 114 (419)
Q Consensus 48 ~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~~~--------~~ 114 (419)
....+++|+|||++++++ + ++|++||+.+++....+..|... ...+.|||||++|++++.+. +.
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~ 93 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--E-NNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTAS 93 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--T-TEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred ccccccEECCCCcEEEEc--C-CcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceE
Confidence 346789999999888886 5 89999999999877666666532 24488999999999987642 26
Q ss_pred EEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEe-ccccc--------------
Q 014755 115 LTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFA-VDTLD-------------- 179 (419)
Q Consensus 115 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~-~~~~~-------------- 179 (419)
+.+||+.+++...+..+...+..++|||||+.|+++.. +.|++|++.+++..+... ++...
T Consensus 94 ~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~----~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~ 169 (740)
T 4a5s_A 94 YDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWN----NDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEV 169 (740)
T ss_dssp EEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEET----TEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHT
T ss_pred EEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEEC----CeEEEEECCCCceEEEcCCCCccceecCcccccccchh
Confidence 78999999998777777788999999999999999864 699999998877544221 22111
Q ss_pred ---eeeeeECCCCCeEEEEcC--C--------------------------------CCceEEEEcC-C---Cc--eEEEE
Q 014755 180 ---LADIEWSPDDSAIVIWDS--P--------------------------------LEYKVLIYSP-D---GR--CLLKY 216 (419)
Q Consensus 180 ---v~~~~~~~~~~~l~~~~~--~--------------------------------~~~~i~~~d~-~---~~--~~~~~ 216 (419)
...+.|||||+.|+.... + ....|++||+ + ++ ....+
T Consensus 170 ~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l 249 (740)
T 4a5s_A 170 FSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQI 249 (740)
T ss_dssp SSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEE
T ss_pred cCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEe
Confidence 135889999999987421 0 0126889999 4 42 33444
Q ss_pred eec----CCCCceeEEEEccCCCeEEEEEe----cCcEEEEEcCCce----eeeeecccccccCCCccceeccCCCcccc
Q 014755 217 QAY----ESGLGVKSISWSPCGQFLAVGSY----DQTLRVLNHLTWK----TFAEFMHLSTVRGPCFPAVFKEVDEPLQL 284 (419)
Q Consensus 217 ~~~----~~~~~v~~~~~s~~~~~l~~~~~----d~~i~v~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (419)
... .+...+..++|+|||+.++.... +..|++||+.+++ +...... +.
T Consensus 250 ~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l------------~~-------- 309 (740)
T 4a5s_A 250 TAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQH------------IE-------- 309 (740)
T ss_dssp CCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCE------------EE--------
T ss_pred cCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEe------------ee--------
Confidence 321 13337899999999997776543 2379999998876 2221100 00
Q ss_pred cceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcce-----EEEEEccCCeEEE-EecC-CCCc
Q 014755 285 DMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGI-----GLMSWSSDSQYIC-TRND-SMPT 357 (419)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-----~~~~~s~~g~~l~-~~~~-d~~~ 357 (419)
..|..+| ..++|||||+.|+ ..+. +...
T Consensus 310 ---------------------------------------------~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~ 344 (740)
T 4a5s_A 310 ---------------------------------------------MSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYR 344 (740)
T ss_dssp ---------------------------------------------ECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCE
T ss_pred ---------------------------------------------ccCCceEccCcCCCceEcCCCCEEEEEEEcCCCce
Confidence 0011111 2568999999877 5543 3225
Q ss_pred eEEEeeccCCCceeecccCCCeeEEEeCCCCCeEEEEe-C----CCcEEEee--cCCCe
Q 014755 358 TLWIWDICRQEPAAILVQKDPIRAATWDPTCTRLVLCT-G----SSHLYMWT--PSGAY 409 (419)
Q Consensus 358 ~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~----dg~i~vw~--~~~~~ 409 (419)
.|++||+.+++...+......+..+.+ +|++.|+..+ . .+...||. +.++.
T Consensus 345 ~l~~~~~~~~~~~~lT~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~ 402 (740)
T 4a5s_A 345 HICYFQIDKKDCTFITKGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQLIDYT 402 (740)
T ss_dssp EEEEEETTCSSCEESCCSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEEETTEEE
T ss_pred EEEEEECCCCceEecccCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEEECCCCC
Confidence 799999998888777655556666542 3466554443 3 23445554 44443
No 167
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.91 E-value=1.9e-20 Score=171.30 Aligned_cols=325 Identities=9% Similarity=0.053 Sum_probs=227.4
Q ss_pred EEcCC-CCEEEEE-e-CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEcc--CCcceeeeec
Q 014755 14 CFSPN-ARYIAVA-V-DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLT--QPEWTCKIDE 88 (419)
Q Consensus 14 ~~s~d-~~~la~~-~-~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~--~~~~~~~~~~ 88 (419)
.+..| +++++++ . ++.|.++|..+++++..+.....+..+.|+|||+++++++.+ +.|.+||+. +++.+.++..
T Consensus 160 ~~~~d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~d-g~V~viD~~~~t~~~v~~i~~ 238 (567)
T 1qks_A 160 MNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRD-GKVNMIDLWMKEPTTVAEIKI 238 (567)
T ss_dssp CSCCCGGGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETT-SEEEEEETTSSSCCEEEEEEC
T ss_pred ccccCCCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCC-CeEEEEECCCCCCcEeEEEec
Confidence 34444 3344444 3 788999999999999888876678899999999999998865 899999996 7777777765
Q ss_pred CCccEeEEEEC----CCCCEEEEEecCCCeEEEEEcCCCeEEE-eccC-----------CCCeeeEEEccCCCEEEEEee
Q 014755 89 GLAGIAYARWS----PDSRHILTTSDFQLRLTVWSLLNTACVH-VQSP-----------KHASKGVAFTQDGKFAAICTR 152 (419)
Q Consensus 89 ~~~~v~~~~~~----~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~-----------~~~~~~~~~~~~~~~l~~~~~ 152 (419)
.. ....++|+ |||++++++....+.+.++|..+.+.+. +... ...+..+..++++..+++...
T Consensus 239 G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~ 317 (567)
T 1qks_A 239 GS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK 317 (567)
T ss_dssp CS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred CC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec
Confidence 44 45789999 6999999998776799999999988776 3211 125678888998877776665
Q ss_pred cCCCCeEEEEeccCCeEEEEEe-ccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEee-cCCCCceeEEE
Q 014755 153 RDCKDYINLLSCHTWEIMGVFA-VDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQA-YESGLGVKSIS 229 (419)
Q Consensus 153 ~~~~g~v~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~-~~~~~~v~~~~ 229 (419)
+ .|.|.++|....+.+.... ........+.|+|+++++++.+ ..++.|.++|. +++.+..+.. .....+-..+.
T Consensus 318 ~--~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~-~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~ 394 (567)
T 1qks_A 318 E--TGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAA-NARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN 394 (567)
T ss_dssp T--TTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEE-GGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEE
T ss_pred C--CCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEe-CCCCeEEEEECCCCcEEEEEeccCcCCCCcccee
Confidence 4 4899999987754322211 2234567889999999998864 34688999999 7777766654 22110112333
Q ss_pred -EccCCCeEE-EEE-ecCcEEEEEcCC-------ceeeeeecccccccCCCccceeccCCCcccccceeeeccCcccccc
Q 014755 230 -WSPCGQFLA-VGS-YDQTLRVLNHLT-------WKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGN 299 (419)
Q Consensus 230 -~s~~~~~l~-~~~-~d~~i~v~d~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (419)
++|++..+. ++. .+++|.++|..+ ++.++++...
T Consensus 395 ~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~------------------------------------ 438 (567)
T 1qks_A 395 FVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPAL------------------------------------ 438 (567)
T ss_dssp EEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECS------------------------------------
T ss_pred eECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecC------------------------------------
Confidence 578755444 443 467999999887 3344433210
Q ss_pred ccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCC-C----CceEEEeeccCC-----C-
Q 014755 300 SDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDS-M----PTTLWIWDICRQ-----E- 368 (419)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d-~----~~~i~iwd~~~~-----~- 368 (419)
...-..+..+|+++++.+...- . .++|.++|+.+. .
T Consensus 439 ---------------------------------g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~ 485 (567)
T 1qks_A 439 ---------------------------------GGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDP 485 (567)
T ss_dssp ---------------------------------CSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCC
T ss_pred ---------------------------------CCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCC
Confidence 0011236789999998886531 0 158999999876 2
Q ss_pred ceeecc---------cCCCeeEEEeCCCCCeEEEEe-----CCCcEEEeecCCCeEEe
Q 014755 369 PAAILV---------QKDPIRAATWDPTCTRLVLCT-----GSSHLYMWTPSGAYCVS 412 (419)
Q Consensus 369 ~~~~~~---------~~~~v~~~~~s~~~~~l~s~~-----~dg~i~vw~~~~~~~~~ 412 (419)
....+. ....+..+.|+|+|+.+..+. .++.|.|+|.++.+++.
T Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~ 543 (567)
T 1qks_A 486 EFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKH 543 (567)
T ss_dssp CEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEE
T ss_pred CcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEE
Confidence 112221 245789999999999775553 37899999999988764
No 168
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.91 E-value=2.5e-22 Score=176.31 Aligned_cols=239 Identities=13% Similarity=0.030 Sum_probs=170.8
Q ss_pred CeEEcCCCCEEEEEeCCeEEEEecC-CCcEEEEeecC--cceeEEEEecCCCe--EEEEe-------c-----cCCeEEE
Q 014755 12 PSCFSPNARYIAVAVDYRLVVRDAH-SFKVVQLFSCL--DKISYIEWALDSEY--ILCGL-------Y-----KRLMIQA 74 (419)
Q Consensus 12 ~~~~s~d~~~la~~~~~~i~i~~~~-~~~~~~~~~~~--~~v~~~~~s~~~~~--l~~~~-------~-----~~g~i~i 74 (419)
.++|+|||++|++++.+.|.+|++. ++++.....+. +.+.+++|+|||++ ++++. . .+|.+.+
T Consensus 44 ~~a~spdg~~l~~~~~~~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v 123 (365)
T 1jof_A 44 WMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNV 123 (365)
T ss_dssp EEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEE
T ss_pred EEEECCCCCEEEEEccceEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEE
Confidence 3899999999998885599999997 78776544432 34677999999995 44442 1 3489999
Q ss_pred EEcc-CCcceeeee----cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcC-CCeEEE---ec--cCCCCeeeEEEccC
Q 014755 75 WSLT-QPEWTCKID----EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLL-NTACVH---VQ--SPKHASKGVAFTQD 143 (419)
Q Consensus 75 w~~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~-~~~~~~---~~--~~~~~~~~~~~~~~ 143 (419)
|++. +++....+. .+...+.+++|+|||++++++....+.|++|++. +++... +. .+...+..++|+|+
T Consensus 124 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spd 203 (365)
T 1jof_A 124 FSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPT 203 (365)
T ss_dssp EEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTT
T ss_pred EccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCC
Confidence 9997 465544333 2456789999999999998876544499999998 676543 22 13566899999999
Q ss_pred CCEEEEEeecCCCCeEEEEecc--CCeEEE---EEec-------ccc------ceeeee-ECCCCCeEEEEcCCCC----
Q 014755 144 GKFAAICTRRDCKDYINLLSCH--TWEIMG---VFAV-------DTL------DLADIE-WSPDDSAIVIWDSPLE---- 200 (419)
Q Consensus 144 ~~~l~~~~~~~~~g~v~i~d~~--~~~~~~---~~~~-------~~~------~v~~~~-~~~~~~~l~~~~~~~~---- 200 (419)
|++++++... .+.|.+|+++ +++... .+.. +.. .+..++ |+|||+++++.+...+
T Consensus 204 g~~l~v~~~~--~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~ 281 (365)
T 1jof_A 204 GNYLYALMEA--GNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQ 281 (365)
T ss_dssp SSEEEEEETT--TTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSC
T ss_pred CCEEEEEECC--CCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCC
Confidence 9999888754 3689998765 455421 2221 111 478899 9999999887543322
Q ss_pred ceEEEEcC--CCceEEE---EeecCCCCceeEEEEcc---CCCeEEEEEec-CcEEEEEcCCc
Q 014755 201 YKVLIYSP--DGRCLLK---YQAYESGLGVKSISWSP---CGQFLAVGSYD-QTLRVLNHLTW 254 (419)
Q Consensus 201 ~~i~~~d~--~~~~~~~---~~~~~~~~~v~~~~~s~---~~~~l~~~~~d-~~i~v~d~~~~ 254 (419)
+.|.+|++ +++.... ...+.. .+..++|+| +|++|++++.+ +.|++|++...
T Consensus 282 ~~i~v~~~~~~g~~~~~~~~~~~~~~--~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 282 GYIAGFKLRDCGSIEKQLFLSPTPTS--GGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp CEEEEEEECTTSCEEEEEEEEECSSC--CTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CeEEEEEECCCCCEEEeeeeeecCCC--CcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 28999998 4554332 222222 467899999 89999998864 89999998765
No 169
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.91 E-value=5e-21 Score=167.08 Aligned_cols=271 Identities=15% Similarity=0.122 Sum_probs=191.2
Q ss_pred CcceeEEEEecCCCeEEEEecc--------CCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCC----Ce
Q 014755 47 LDKISYIEWALDSEYILCGLYK--------RLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQ----LR 114 (419)
Q Consensus 47 ~~~v~~~~~s~~~~~l~~~~~~--------~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~----~~ 114 (419)
...+..+++ ||+.++..... ++.|.+||+.+++.. .+ ..+..++|+|||++|++++.++ ..
T Consensus 14 ~~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~ 86 (347)
T 2gop_A 14 FAYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR-FI----ENATMPRISPDGKKIAFMRANEEKKVSE 86 (347)
T ss_dssp SCEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE-EE----ESCEEEEECTTSSEEEEEEEETTTTEEE
T ss_pred eEEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE-Ec----ccCCCeEECCCCCEEEEEEeccCCCcce
Confidence 345677778 89988875311 258999999888643 34 5678899999999999887532 24
Q ss_pred EEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeec------------------------CCCCeEEEEeccCCeEE
Q 014755 115 LTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRR------------------------DCKDYINLLSCHTWEIM 170 (419)
Q Consensus 115 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~------------------------~~~g~v~i~d~~~~~~~ 170 (419)
|.+|++.+++...+..... +..++|+|||+.|++++.+ .....|++||+.+++.+
T Consensus 87 l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 165 (347)
T 2gop_A 87 IWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVI 165 (347)
T ss_dssp EEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEE
T ss_pred EEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEE
Confidence 8888999988777544444 8999999999999988742 01247999999988874
Q ss_pred EEEeccccceeeeeECCCCCeEEEEcCCC-------CceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEec
Q 014755 171 GVFAVDTLDLADIEWSPDDSAIVIWDSPL-------EYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYD 243 (419)
Q Consensus 171 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-------~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 243 (419)
..+.. . .+..+.|+|+| .+++..... ...|+++| +++. ..+..+ . .+..+ +|+|++|+..+.+
T Consensus 166 ~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d-~~~~-~~l~~~-~--~~~~~--spdg~~l~~~~~~ 235 (347)
T 2gop_A 166 EEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE-DGKE-EKMFEK-V--SFYAV--DSDGERILLYGKP 235 (347)
T ss_dssp EEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE-TTEE-EEEEEE-E--SEEEE--EECSSCEEEEECC
T ss_pred eeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC-CCce-EEeccC-c--ceeeE--CCCCCEEEEEEcc
Confidence 55555 4 78899999999 666543221 33677777 5544 344333 2 45544 9999999888754
Q ss_pred C--------cEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEecc
Q 014755 244 Q--------TLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVME 315 (419)
Q Consensus 244 ~--------~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (419)
+ .|++|| +++......
T Consensus 236 ~~~~~~~~~~l~~~d--~~~~~~l~~------------------------------------------------------ 259 (347)
T 2gop_A 236 EKKYMSEHNKLYIYD--GKEVMGILD------------------------------------------------------ 259 (347)
T ss_dssp SSSCCCSSCEEEEEC--SSCEEESST------------------------------------------------------
T ss_pred ccCCccccceEEEEC--CCceEeccc------------------------------------------------------
Confidence 3 577777 443322111
Q ss_pred CCCCCCCCCCCCCCCCCCcceEE-EEEccCCeEEEEecCCCCceEEEeeccCCCceeecccCCCeeEEEeCCCCCeEEEE
Q 014755 316 IPISLPFQKPPTDKPNPKQGIGL-MSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCTRLVLC 394 (419)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~v~~-~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 394 (419)
.+...+.. +.|+ |+ ++++++.+ +.++|| +.+++...+..+...|.+++|+| .+++++
T Consensus 260 ---------------~~~~~~~~~~~~s-dg-~~~~~~~~--~~~~l~-~~~g~~~~~~~~~~~v~~~~~s~--~~~~~~ 317 (347)
T 2gop_A 260 ---------------EVDRGVGQAKIKD-GK-VYFTLFEE--GSVNLY-IWDGEIKPIAKGRHWIMGFDVDE--IVVYLK 317 (347)
T ss_dssp ---------------TCCSEEEEEEEET-TE-EEEEEEET--TEEEEE-EESSSEEEEECSSSEEEEEEESS--SEEEEE
T ss_pred ---------------cCCcccCCccEEc-Cc-EEEEEecC--CcEEEE-EcCCceEEEecCCCeEEeeeeeC--cEEEEE
Confidence 23445665 8999 88 88888888 999999 88777766666778899999999 677777
Q ss_pred eCCCcE-EEeecCCCeEEecC
Q 014755 395 TGSSHL-YMWTPSGAYCVSNP 414 (419)
Q Consensus 395 ~~dg~i-~vw~~~~~~~~~~~ 414 (419)
+.++.. .+|.+. ++..++.
T Consensus 318 ~~~~~~~~l~~~~-g~~~~lt 337 (347)
T 2gop_A 318 ETATRLRELFTWD-GEEKQLT 337 (347)
T ss_dssp ECSSSCCEEEEES-SSEEECC
T ss_pred cCCCChHHheEeC-CcEEEec
Confidence 777664 777776 6655544
No 170
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=1.8e-21 Score=174.01 Aligned_cols=237 Identities=11% Similarity=0.087 Sum_probs=168.2
Q ss_pred ccCeEEcCCCCEEEEEeCCeEEEEecCCC-----------cE-----EEEeecCcceeEEEEecCCCeEE----EEeccC
Q 014755 10 TGPSCFSPNARYIAVAVDYRLVVRDAHSF-----------KV-----VQLFSCLDKISYIEWALDSEYIL----CGLYKR 69 (419)
Q Consensus 10 ~~~~~~s~d~~~la~~~~~~i~i~~~~~~-----------~~-----~~~~~~~~~v~~~~~s~~~~~l~----~~~~~~ 69 (419)
...+++++++.+|++++.+.+++|+.... .. ...+.+...|.+++|+|+|++|+ +++.|
T Consensus 39 ~n~lavs~~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d- 117 (434)
T 2oit_A 39 SSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYG- 117 (434)
T ss_dssp CBCEEEETTTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTTE-
T ss_pred ccEEEEecCCCEEEEECCCEEEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCCC-
Confidence 44489999999999998666999865311 11 12344667899999999999999 55545
Q ss_pred CeEEEEEccCC--------cc---eeeeecCCccEeEEEECCC-CCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCee
Q 014755 70 LMIQAWSLTQP--------EW---TCKIDEGLAGIAYARWSPD-SRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASK 136 (419)
Q Consensus 70 g~i~iw~~~~~--------~~---~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~ 136 (419)
+.|+|||+.++ +. ...+.+|...|.+++|+|+ +..|++++.|+ .|++||++++.... ...|...+.
T Consensus 118 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg-~v~iwD~~~~~~~~~~~~~~~~v~ 196 (434)
T 2oit_A 118 SIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADG-SIAVLQVTETVKVCATLPSTVAVT 196 (434)
T ss_dssp EEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTS-CEEEEEESSSEEEEEEECGGGCEE
T ss_pred ceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCC-eEEEEEcCCCcceeeccCCCCcee
Confidence 89999998764 11 3345568899999999998 78899999987 99999999986655 556778899
Q ss_pred eEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEecc-------ccceeeeeECCCCCeEEEEcCCC-----CceEE
Q 014755 137 GVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVD-------TLDLADIEWSPDDSAIVIWDSPL-----EYKVL 204 (419)
Q Consensus 137 ~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~~~-----~~~i~ 204 (419)
+++|+|+|++|++++.| |.|++||++ ++....+..+ ...+.++.|++++.+++...... ...++
T Consensus 197 ~v~wspdg~~lasgs~d---g~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~ 272 (434)
T 2oit_A 197 SVCWSPKGKQLAVGKQN---GTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVV 272 (434)
T ss_dssp EEEECTTSSCEEEEETT---SCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEE
T ss_pred EEEEcCCCCEEEEEcCC---CcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceE
Confidence 99999999999999987 899999998 5555555433 23789999999988886644321 13589
Q ss_pred EEcCCCc------eEEEEeec-----CCCCceeEEEEccCCCeEEEEEe-cCcEEEEEcC
Q 014755 205 IYSPDGR------CLLKYQAY-----ESGLGVKSISWSPCGQFLAVGSY-DQTLRVLNHL 252 (419)
Q Consensus 205 ~~d~~~~------~~~~~~~~-----~~~~~v~~~~~s~~~~~l~~~~~-d~~i~v~d~~ 252 (419)
+|++... ....+... ..+.+-..+.+-++.+++++++. ...|.|+...
T Consensus 273 i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~ 332 (434)
T 2oit_A 273 MALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQ 332 (434)
T ss_dssp EEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEEC
T ss_pred EEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEec
Confidence 9998221 11221111 11112223334477777666654 4457776643
No 171
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.91 E-value=6e-21 Score=166.56 Aligned_cols=221 Identities=11% Similarity=0.067 Sum_probs=155.8
Q ss_pred eEEcCCCCEEEEEe----------CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccC--C--eEEEEEcc
Q 014755 13 SCFSPNARYIAVAV----------DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKR--L--MIQAWSLT 78 (419)
Q Consensus 13 ~~~s~d~~~la~~~----------~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~--g--~i~iw~~~ 78 (419)
+++ ||++||+.. +..|++||+.+++...+ ..+..++|||||++|++.+.+. + .|.+|++.
T Consensus 20 ~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~ 93 (347)
T 2gop_A 20 PRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLE 93 (347)
T ss_dssp EEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETT
T ss_pred ceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECC
Confidence 567 999999863 34699999999886655 5688999999999999887542 2 47888888
Q ss_pred CCcceeeeecCCccEeEEEECCCCCEEEEEecC--------------------------CCeEEEEEcCCCeE-EEeccC
Q 014755 79 QPEWTCKIDEGLAGIAYARWSPDSRHILTTSDF--------------------------QLRLTVWSLLNTAC-VHVQSP 131 (419)
Q Consensus 79 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--------------------------~~~i~iwd~~~~~~-~~~~~~ 131 (419)
+++... +..+.. +..++|+|||+.|++++.+ ...|.+||+.+++. ..+..
T Consensus 94 ~g~~~~-l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~- 170 (347)
T 2gop_A 94 TLSSKK-ILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK- 170 (347)
T ss_dssp TTEEEE-EEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-
T ss_pred CCceEE-EEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-
Confidence 876543 333344 8999999999999988742 23799999999887 44544
Q ss_pred CCCeeeEEEccCCCEEEEEeecCC------CCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCC------
Q 014755 132 KHASKGVAFTQDGKFAAICTRRDC------KDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPL------ 199 (419)
Q Consensus 132 ~~~~~~~~~~~~~~~l~~~~~~~~------~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~------ 199 (419)
. .+..++|+|+| .++++..+.. ...|+++| +++.. .+..+ ..+..+ +|+|+.+++.....
T Consensus 171 ~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~-~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~ 242 (347)
T 2gop_A 171 P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEE-KMFEK-VSFYAV--DSDGERILLYGKPEKKYMSE 242 (347)
T ss_dssp E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEE-EEEEE-ESEEEE--EECSSCEEEEECCSSSCCCS
T ss_pred C-CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceE-EeccC-cceeeE--CCCCCEEEEEEccccCCccc
Confidence 4 78899999999 6666654311 12455556 55543 33333 444444 89999887743322
Q ss_pred CceEEEEcCCCceEEEEeecCCCCceeE-EEEccCCCeEEEEEecCcEEEEEcCCcee
Q 014755 200 EYKVLIYSPDGRCLLKYQAYESGLGVKS-ISWSPCGQFLAVGSYDQTLRVLNHLTWKT 256 (419)
Q Consensus 200 ~~~i~~~d~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~~~~~d~~i~v~d~~~~~~ 256 (419)
...|++|| +++.......+ ...+.. +.|+ ++ ++++++.++.+++| +.+++.
T Consensus 243 ~~~l~~~d-~~~~~~l~~~~--~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~ 294 (347)
T 2gop_A 243 HNKLYIYD-GKEVMGILDEV--DRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEI 294 (347)
T ss_dssp SCEEEEEC-SSCEEESSTTC--CSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSE
T ss_pred cceEEEEC-CCceEeccccC--CcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCce
Confidence 35899999 66543322222 236776 8999 88 88889999999999 875443
No 172
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=1.4e-20 Score=168.13 Aligned_cols=213 Identities=11% Similarity=0.047 Sum_probs=160.7
Q ss_pred CeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCc----------cee-----eeecCCcc
Q 014755 28 YRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPE----------WTC-----KIDEGLAG 92 (419)
Q Consensus 28 ~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~----------~~~-----~~~~~~~~ 92 (419)
+++++|+.... .....+..+++++++.++++++.+ + +++|+..... ... ....+...
T Consensus 23 ~~vri~~~~~~------~~~~~~n~lavs~~~~~l~~~~~d-g-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (434)
T 2oit_A 23 KKVRIFDSPEE------LPKERSSLLAVSNKYGLVFAGGAS-G-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFP 94 (434)
T ss_dssp CEEECSCCCSS------CCCSCCBCEEEETTTTEEEEEETT-E-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSC
T ss_pred eeEEecCCccc------cCCCCccEEEEecCCCEEEEECCC-E-EEEEEchHhhhhcccccCcccccccCccccccCCCc
Confidence 56777765321 123468999999999999998865 4 9998754210 000 11234567
Q ss_pred EeEEEECCCCCEEE----EEecCCCeEEEEEcCCC--------e---EEE-eccCCCCeeeEEEccC-CCEEEEEeecCC
Q 014755 93 IAYARWSPDSRHIL----TTSDFQLRLTVWSLLNT--------A---CVH-VQSPKHASKGVAFTQD-GKFAAICTRRDC 155 (419)
Q Consensus 93 v~~~~~~~~~~~l~----~~~~~~~~i~iwd~~~~--------~---~~~-~~~~~~~~~~~~~~~~-~~~l~~~~~~~~ 155 (419)
|.+++|+|++++|+ +++.++ .|++||++++ + ... +..|...+.+++|+|+ +.+|++++.|
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~D-- 171 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGS-IIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLAD-- 171 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEE-EEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETT--
T ss_pred ccEEEEcCCCCEEEEEEeccCCCc-eEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECC--
Confidence 99999999999999 455565 9999998764 1 122 5567889999999998 7889999887
Q ss_pred CCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCC-----CCceeEEEE
Q 014755 156 KDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYES-----GLGVKSISW 230 (419)
Q Consensus 156 ~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-----~~~v~~~~~ 230 (419)
|+|++||++++........|...+.+++|+|+|++|++ ++.|+.|++||..++....+..+.. ...+.+++|
T Consensus 172 -g~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~las--gs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w 248 (434)
T 2oit_A 172 -GSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAV--GKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLW 248 (434)
T ss_dssp -SCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEE--EETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEE
T ss_pred -CeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEE--EcCCCcEEEEccCCcccccccCCcccCCCCceeEEEEEE
Confidence 89999999998777777778899999999999999998 6679999999998666666654422 237899999
Q ss_pred ccCCCeEEEEE-ecC------cEEEEEcCCc
Q 014755 231 SPCGQFLAVGS-YDQ------TLRVLNHLTW 254 (419)
Q Consensus 231 s~~~~~l~~~~-~d~------~i~v~d~~~~ 254 (419)
++++.++++.+ .+| .+++|++...
T Consensus 249 ~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 249 IGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred ecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 99988776543 333 3889998754
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.89 E-value=7e-21 Score=180.80 Aligned_cols=303 Identities=9% Similarity=-0.048 Sum_probs=198.7
Q ss_pred ecCcceeEEEEecCCCeEEEEe-ccCCeEEEEEccCCcceeeeecCCccEe---------EEEEC--CCCCE-EEEEecC
Q 014755 45 SCLDKISYIEWALDSEYILCGL-YKRLMIQAWSLTQPEWTCKIDEGLAGIA---------YARWS--PDSRH-ILTTSDF 111 (419)
Q Consensus 45 ~~~~~v~~~~~s~~~~~l~~~~-~~~g~i~iw~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-l~~~~~~ 111 (419)
.|...+..++|++++-+++... ..++...||....+.....+..+...+. ...|+ |||+. |+.++..
T Consensus 21 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~ 100 (662)
T 3azo_A 21 SRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFG 100 (662)
T ss_dssp HTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTT
T ss_pred hcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECC
Confidence 4778899999998755555541 2247899999655555667777766655 56665 99999 8877654
Q ss_pred CCeEEEEEcC--C-CeEEEecc-----CCCCeeeEEEccCCCEEEEEeec-------CCCCeEEEEeccC------CeEE
Q 014755 112 QLRLTVWSLL--N-TACVHVQS-----PKHASKGVAFTQDGKFAAICTRR-------DCKDYINLLSCHT------WEIM 170 (419)
Q Consensus 112 ~~~i~iwd~~--~-~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~-------~~~g~v~i~d~~~------~~~~ 170 (419)
...|.++++. + ++...+.. +...+..++|+|||+.|++++.+ .....|++||+.+ ++.
T Consensus 101 ~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~- 179 (662)
T 3azo_A 101 DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV- 179 (662)
T ss_dssp TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-
T ss_pred CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-
Confidence 4478888877 4 66555555 44567899999999999998865 2224899999987 543
Q ss_pred EEEe-ccccceeeeeECCCCCeEEEEcCCC------CceEEEEcCC--Cc--eEEEEeecCCCCceeEEEEccCCCeEEE
Q 014755 171 GVFA-VDTLDLADIEWSPDDSAIVIWDSPL------EYKVLIYSPD--GR--CLLKYQAYESGLGVKSISWSPCGQFLAV 239 (419)
Q Consensus 171 ~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~------~~~i~~~d~~--~~--~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 239 (419)
..+. .+...+..++|+|||+.|++..... ...|++||+. ++ ....+... +...+..++|+|||+++++
T Consensus 180 ~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~-~~~~~~~~~~spdg~l~~~ 258 (662)
T 3azo_A 180 RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG-PEEAIAQAEWAPDGSLIVA 258 (662)
T ss_dssp EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE-TTBCEEEEEECTTSCEEEE
T ss_pred eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC-CCceEcceEECCCCeEEEE
Confidence 3444 5556788899999999998743221 2589999995 31 33344332 1226899999999997777
Q ss_pred EEecC--cEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCC
Q 014755 240 GSYDQ--TLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIP 317 (419)
Q Consensus 240 ~~~d~--~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (419)
+..++ .|++||+.+++......+...+.. ..|+
T Consensus 259 ~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~----p~w~----------------------------------------- 293 (662)
T 3azo_A 259 TDRTGWWNLHRVDPATGAATQLCRREEEFAG----PLWT----------------------------------------- 293 (662)
T ss_dssp ECTTSSCEEEEECTTTCCEEESSCCSSBSSC----CCCS-----------------------------------------
T ss_pred ECCCCCeEEEEEECCCCceeecccccccccC----cccc-----------------------------------------
Confidence 77777 566666656654333221111100 0000
Q ss_pred CCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEe--eccCCCceeecccCCCeeEE-EeCCCCCeEEEE
Q 014755 318 ISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIW--DICRQEPAAILVQKDPIRAA-TWDPTCTRLVLC 394 (419)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iw--d~~~~~~~~~~~~~~~v~~~-~~s~~~~~l~s~ 394 (419)
..+..++|+|++++++++.. +.++|| |+.++++..+..|...+..+ +++++.-.++++
T Consensus 294 ----------------~~~~~~~~~~~~~~~~~~~~---~~~~l~~~d~~~~~~~~l~~~~~~~~~~~s~~~~~~~~~~~ 354 (662)
T 3azo_A 294 ----------------PGMRWFAPLANGLIAVVHGK---GAAVLGILDPESGELVDAAGPWTEWAATLTVSGTRAVGVAA 354 (662)
T ss_dssp ----------------TTCCSEEECTTSCEEEEEBS---SSCEEEEEETTTTEEEECCSSCCEEEEEEEEETTEEEEEEE
T ss_pred ----------------ccCceEeEeCCCEEEEEEEc---CccEEEEEECCCCcEEEecCCCCeEEEEEecCCCEEEEEEc
Confidence 01345889999999888875 556666 76667755555577777777 554333344455
Q ss_pred eCCC--cEEEeecCCCeEEec
Q 014755 395 TGSS--HLYMWTPSGAYCVSN 413 (419)
Q Consensus 395 ~~dg--~i~vw~~~~~~~~~~ 413 (419)
+.+. .|.+|++.++++..+
T Consensus 355 ~~~~~~~i~~~d~~~g~~~~l 375 (662)
T 3azo_A 355 SPRTAYEVVELDTVTGRARTI 375 (662)
T ss_dssp ETTEEEEEEEEETTTCCEEEE
T ss_pred CCCCCCEEEEEECCCCceEEe
Confidence 5554 456667777766554
No 174
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.88 E-value=3.9e-20 Score=161.50 Aligned_cols=287 Identities=13% Similarity=0.089 Sum_probs=190.9
Q ss_pred CCCeEEEEec-----cCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEec---------CCCeEEEEEcCCC
Q 014755 58 DSEYILCGLY-----KRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSD---------FQLRLTVWSLLNT 123 (419)
Q Consensus 58 ~~~~l~~~~~-----~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------~~~~i~iwd~~~~ 123 (419)
+++++++... .++.|.+||..+++.+..+..+..+ .++|+||+++++++.. ..+.|.+||+.+.
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 5666666532 1369999999999988887766555 8999999999999863 1237999999988
Q ss_pred eEEE-eccC------CCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEE-EeccccceeeeeECCCCC-eEEE
Q 014755 124 ACVH-VQSP------KHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGV-FAVDTLDLADIEWSPDDS-AIVI 194 (419)
Q Consensus 124 ~~~~-~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~-~l~~ 194 (419)
+... +... ......++++|||++|+++.... .+.|.+||+.+++.+.. +... ....+.+.|++. .++.
T Consensus 92 ~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~-~~~v~v~d~~~~~~~~~~i~~~--~~~~v~~~p~~~~~~~~ 168 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASP-ATSIGIVDVAKGDYVEDVTAAA--GCWSVIPQPNRPRSFMT 168 (361)
T ss_dssp CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESS-SEEEEEEETTTTEEEEEEGGGT--TEEEEEECTTSSSEEEE
T ss_pred cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCC-CCeEEEEECCCCcEEEEEecCC--CcceeEEcCCCCeeEEE
Confidence 7766 3322 23468899999999999987531 26899999999988776 4432 223355677763 3333
Q ss_pred EcCCCCceEEEEcC--CCceEEEEee----cCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceee--eeecccccc
Q 014755 195 WDSPLEYKVLIYSP--DGRCLLKYQA----YESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTF--AEFMHLSTV 266 (419)
Q Consensus 195 ~~~~~~~~i~~~d~--~~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~--~~~~~~~~~ 266 (419)
.+.++.+.+++. +++....... +... ....+.++|++..++..+.++.|.++|+...+.. ..+......
T Consensus 169 --~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~ 245 (361)
T 2oiz_A 169 --ICGDGGLLTINLGEDGKVASQSRSKQMFSVKD-DPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDE 245 (361)
T ss_dssp --EETTSSEEEEEECTTSSEEEEEECCCCSCTTT-SCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHH
T ss_pred --ECCCCcEEEEEECCCCcEeeeccccceEcCCC-CceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCcc
Confidence 344778888877 3554422210 0111 1223445678888888888899999998654321 111100000
Q ss_pred cCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCe
Q 014755 267 RGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQ 346 (419)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 346 (419)
.....+.+ .....++|+|+++
T Consensus 246 ---~~~~~~~p--------------------------------------------------------~g~~~~a~~~dg~ 266 (361)
T 2oiz_A 246 ---DKAKNWVP--------------------------------------------------------GGYNLVGLHRASG 266 (361)
T ss_dssp ---HHHTTCEE--------------------------------------------------------CCSSCEEEETTTT
T ss_pred ---cccccccc--------------------------------------------------------CCeeEEEEecCCC
Confidence 00000000 0011268999987
Q ss_pred EEEEecC---------CCCceEEEeeccCCCceeecccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCC--eEEec
Q 014755 347 YICTRND---------SMPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGA--YCVSN 413 (419)
Q Consensus 347 ~l~~~~~---------d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~--~~~~~ 413 (419)
.++++.. +..+.|.+||+.+++.+..+.-.. +.+++|+|||++|++++. +.|.+||..++ ++++.
T Consensus 267 ~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~ 342 (361)
T 2oiz_A 267 RMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRT 342 (361)
T ss_dssp EEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEE
T ss_pred eEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEE
Confidence 7766532 112589999999999888775333 999999999999998887 99999999999 77655
No 175
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.88 E-value=3.2e-19 Score=170.36 Aligned_cols=282 Identities=11% Similarity=0.054 Sum_probs=194.7
Q ss_pred cCCCCEEEEEe-C-C----eEEEEecCCCcEEEEee-------cCcceeEEEEecCCCeEEEEeccCC----eEEEEEcc
Q 014755 16 SPNARYIAVAV-D-Y----RLVVRDAHSFKVVQLFS-------CLDKISYIEWALDSEYILCGLYKRL----MIQAWSLT 78 (419)
Q Consensus 16 s~d~~~la~~~-~-~----~i~i~~~~~~~~~~~~~-------~~~~v~~~~~s~~~~~l~~~~~~~g----~i~iw~~~ 78 (419)
+|||++++... + + .+++.+..+++...++. |...+..++|||||++||++..+.| .|++||+.
T Consensus 80 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~ 159 (710)
T 2xdw_A 80 FKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVD 159 (710)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETT
T ss_pred EEECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECC
Confidence 48999999875 2 2 35566665665544432 2335889999999999998876544 89999999
Q ss_pred CCcceeeeecCCccEeEEEECCCCCEEEEEecCCC---------------eEEEEEcCCCeE---EEecc--CCCCeeeE
Q 014755 79 QPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQL---------------RLTVWSLLNTAC---VHVQS--PKHASKGV 138 (419)
Q Consensus 79 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~---------------~i~iwd~~~~~~---~~~~~--~~~~~~~~ 138 (419)
+++....... ...+..++|+|||+.|++++.+.. .|++|++.+++. ..... +......+
T Consensus 160 tg~~~~~~~~-~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~ 238 (710)
T 2xdw_A 160 GAKELPDVLE-RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGA 238 (710)
T ss_dssp TTEEEEEEEE-EECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEE
T ss_pred CCCCCccccc-CcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEE
Confidence 9987653322 223678999999999999886652 399999988652 22222 33446789
Q ss_pred EEccCCCEEEEEeecCC--CCeEEEEeccC------Ce-EEEEEeccccceeeeeECCCCCeEEEEcCC--CCceEEEEc
Q 014755 139 AFTQDGKFAAICTRRDC--KDYINLLSCHT------WE-IMGVFAVDTLDLADIEWSPDDSAIVIWDSP--LEYKVLIYS 207 (419)
Q Consensus 139 ~~~~~~~~l~~~~~~~~--~g~v~i~d~~~------~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--~~~~i~~~d 207 (419)
.|+|||++|++.+.... ...|++||+.+ +. ....+..+...+.. .|+|+|+.+++.... ....|++||
T Consensus 239 ~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d 317 (710)
T 2xdw_A 239 ELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINID 317 (710)
T ss_dssp EECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEE
T ss_pred EEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEe
Confidence 99999999998876332 36899999986 43 34555555555544 588999988774322 245799999
Q ss_pred C-CCc--eEEEEeecCCCCceeEEEEccCCCeEEEEEecCc--EEEEEcCCceeeeeecccccccCCCccceeccCCCcc
Q 014755 208 P-DGR--CLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQT--LRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPL 282 (419)
Q Consensus 208 ~-~~~--~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~--i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (419)
+ ++. ....+..+.....+..++|++++.++++...++. |++|++.+++.+..+.
T Consensus 318 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~--------------------- 376 (710)
T 2xdw_A 318 FTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFP--------------------- 376 (710)
T ss_dssp TTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEEC---------------------
T ss_pred CCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecC---------------------
Confidence 9 443 2344544433236888999988888888888874 6667776666555443
Q ss_pred cccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEe--cCCCCceEE
Q 014755 283 QLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTR--NDSMPTTLW 360 (419)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~--~~d~~~~i~ 360 (419)
.+.+.+..++++|+++.++.. +...+++|+
T Consensus 377 ------------------------------------------------~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~ 408 (710)
T 2xdw_A 377 ------------------------------------------------LEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIY 408 (710)
T ss_dssp ------------------------------------------------CCSSEEEEEECCTTCSEEEEEEECSSCCCEEE
T ss_pred ------------------------------------------------CCCceEEEEecCCCCCEEEEEEeCCCCCCEEE
Confidence 123447788999998766533 333458999
Q ss_pred EeeccCCC
Q 014755 361 IWDICRQE 368 (419)
Q Consensus 361 iwd~~~~~ 368 (419)
+||+.+++
T Consensus 409 ~~d~~tg~ 416 (710)
T 2xdw_A 409 HCDLTKEE 416 (710)
T ss_dssp EEETTSSS
T ss_pred EEECCCCc
Confidence 99999887
No 176
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.88 E-value=7.9e-21 Score=168.91 Aligned_cols=266 Identities=10% Similarity=0.020 Sum_probs=181.7
Q ss_pred EEEEEccCCcceeeeecCCcc-----EeEEEECCCCCEEEEEecCC--CeEEEEEcCCCeEEEeccCCCCe-eeEEEccC
Q 014755 72 IQAWSLTQPEWTCKIDEGLAG-----IAYARWSPDSRHILTTSDFQ--LRLTVWSLLNTACVHVQSPKHAS-KGVAFTQD 143 (419)
Q Consensus 72 i~iw~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~~~--~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~ 143 (419)
....|..+++.+..+..+... +..++|+|||++|++....+ ..|.+||+.+++...+....... ..+.|+||
T Consensus 12 ~~~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spd 91 (396)
T 3c5m_A 12 ETFVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTD 91 (396)
T ss_dssp EEEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTT
T ss_pred heeecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCC
Confidence 345577788777777655433 67789999999998886542 26889999999887755444443 34889999
Q ss_pred CCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceee-------------------eeECCCCCeEEEEc---CCCCc
Q 014755 144 GKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLAD-------------------IEWSPDDSAIVIWD---SPLEY 201 (419)
Q Consensus 144 ~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~~~~---~~~~~ 201 (419)
|++|++++.+ +.|++||+.+++.......+...... +.|+|+++.+++.. ...+.
T Consensus 92 g~~l~~~~~~---~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~ 168 (396)
T 3c5m_A 92 ERAFFYVKNE---LNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTC 168 (396)
T ss_dssp SSEEEEEETT---TEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCE
T ss_pred CCEEEEEEcC---CcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcc
Confidence 9999998875 68999999988776655544332222 46788888776532 14567
Q ss_pred eEEEEcC-CCceEEEEeecCCCCceeEEEEcc-CCCeEEEEEec------CcEEEEEcCCceeeeeecccccccCCCccc
Q 014755 202 KVLIYSP-DGRCLLKYQAYESGLGVKSISWSP-CGQFLAVGSYD------QTLRVLNHLTWKTFAEFMHLSTVRGPCFPA 273 (419)
Q Consensus 202 ~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~ 273 (419)
.|++||+ +++..... .+.. .+..+.|+| +++.|+..+.+ ..|++||+.+++......+
T Consensus 169 ~l~~~d~~~g~~~~~~-~~~~--~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~----------- 234 (396)
T 3c5m_A 169 RLIKVDIETGELEVIH-QDTA--WLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEH----------- 234 (396)
T ss_dssp EEEEEETTTCCEEEEE-EESS--CEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCC-----------
T ss_pred eEEEEECCCCcEEeec-cCCc--ccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeecc-----------
Confidence 8999999 55544333 3333 688999999 78877776643 3578888765432211100
Q ss_pred eeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecC
Q 014755 274 VFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRND 353 (419)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 353 (419)
.....+..++|+|||++|+.++.
T Consensus 235 ---------------------------------------------------------~~~~~~~~~~~spdg~~l~~~~~ 257 (396)
T 3c5m_A 235 ---------------------------------------------------------AEGESCTHEFWIPDGSAMAYVSY 257 (396)
T ss_dssp ---------------------------------------------------------CTTEEEEEEEECTTSSCEEEEEE
T ss_pred ---------------------------------------------------------CCCccccceEECCCCCEEEEEec
Confidence 01123678999999998877643
Q ss_pred C-CC--ceEEEeeccCCCceeecccCCCeeEEEeCC-CCCeEEEEe----------------CCCcEEEeecCCCeEEec
Q 014755 354 S-MP--TTLWIWDICRQEPAAILVQKDPIRAATWDP-TCTRLVLCT----------------GSSHLYMWTPSGAYCVSN 413 (419)
Q Consensus 354 d-~~--~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~----------------~dg~i~vw~~~~~~~~~~ 413 (419)
+ .. +.|++||+.+++...+..... .. +.|+| ||+++++++ .+..|++||+.+++..++
T Consensus 258 ~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l 335 (396)
T 3c5m_A 258 FKGQTDRVIYKANPETLENEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKL 335 (396)
T ss_dssp ETTTCCEEEEEECTTTCCEEEEEECCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEE
T ss_pred CCCCccceEEEEECCCCCeEEeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEc
Confidence 2 11 349999999887665543222 33 89999 999888754 347899999987765443
No 177
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.87 E-value=5e-18 Score=155.42 Aligned_cols=298 Identities=11% Similarity=0.024 Sum_probs=212.4
Q ss_pred CeEEcCCCCEEEEEe-CCeEEEEecC--CCcEEEEeecCcceeEEEEe----cCCCeEEEEeccCCeEEEEEccCCccee
Q 014755 12 PSCFSPNARYIAVAV-DYRLVVRDAH--SFKVVQLFSCLDKISYIEWA----LDSEYILCGLYKRLMIQAWSLTQPEWTC 84 (419)
Q Consensus 12 ~~~~s~d~~~la~~~-~~~i~i~~~~--~~~~~~~~~~~~~v~~~~~s----~~~~~l~~~~~~~g~i~iw~~~~~~~~~ 84 (419)
.++|||||+++++++ ++.|.+||+. +++.+..+........++|+ |||++++++....++|.++|..+.+.+.
T Consensus 201 ~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~ 280 (567)
T 1qks_A 201 ISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKK 280 (567)
T ss_dssp EEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEE
T ss_pred ceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEE
Confidence 388999999999988 7789999995 88887777655567899999 6999999998888899999999988877
Q ss_pred eeecC-----------CccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE--eccCCCCeeeEEEccCCCEEEEEe
Q 014755 85 KIDEG-----------LAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH--VQSPKHASKGVAFTQDGKFAAICT 151 (419)
Q Consensus 85 ~~~~~-----------~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~ 151 (419)
.+... ...+..+..++++..+++...+.|.|.++|....+... ..........+.|+|++++++++.
T Consensus 281 ~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~ 360 (567)
T 1qks_A 281 IQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAA 360 (567)
T ss_dssp EEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEE
T ss_pred EEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEe
Confidence 66422 12577899999888777776666699999998754333 222344567899999999998887
Q ss_pred ecCCCCeEEEEeccCCeEEEEEec-cccc--eeeee-ECCCCCeEEEEcCCCCceEEEEcC-C-------CceEEEEeec
Q 014755 152 RRDCKDYINLLSCHTWEIMGVFAV-DTLD--LADIE-WSPDDSAIVIWDSPLEYKVLIYSP-D-------GRCLLKYQAY 219 (419)
Q Consensus 152 ~~~~~g~v~i~d~~~~~~~~~~~~-~~~~--v~~~~-~~~~~~~l~~~~~~~~~~i~~~d~-~-------~~~~~~~~~~ 219 (419)
.. .+.|.++|+.+++.+..+.. ...+ -..+. ++|++..+.+.....++.|.++|. + .+.++.+...
T Consensus 361 ~~--sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~ 438 (567)
T 1qks_A 361 NA--RNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPAL 438 (567)
T ss_dssp GG--GTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECS
T ss_pred CC--CCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecC
Confidence 54 37999999999998877654 2211 12223 578766655433334689999998 4 4567777654
Q ss_pred CCCCceeEEEEccCCCeEEEEEe-------cCcEEEEEcCCcee---e---eeecccccccCCCccceeccCCCcccccc
Q 014755 220 ESGLGVKSISWSPCGQFLAVGSY-------DQTLRVLNHLTWKT---F---AEFMHLSTVRGPCFPAVFKEVDEPLQLDM 286 (419)
Q Consensus 220 ~~~~~v~~~~~s~~~~~l~~~~~-------d~~i~v~d~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (419)
.. .-..+..+|+++++.+... .++|.|+|+.+.+. . ..+... .|..
T Consensus 439 g~--g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~----------~~~~--------- 497 (567)
T 1qks_A 439 GG--GSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIA----------EWAG--------- 497 (567)
T ss_dssp CS--CCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHH----------HHHT---------
T ss_pred CC--CCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccc----------cccc---------
Confidence 32 3455789999999988662 45999999887511 1 111000 0000
Q ss_pred eeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecC---CCCceEEEee
Q 014755 287 SELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRND---SMPTTLWIWD 363 (419)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~---d~~~~i~iwd 363 (419)
+......+..+.|+|+|+++..+.. +.++.|.|+|
T Consensus 498 ------------------------------------------~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D 535 (567)
T 1qks_A 498 ------------------------------------------ITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVD 535 (567)
T ss_dssp ------------------------------------------CCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEE
T ss_pred ------------------------------------------cCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEE
Confidence 0001234788999999998776632 1238999999
Q ss_pred ccCCCceeecc
Q 014755 364 ICRQEPAAILV 374 (419)
Q Consensus 364 ~~~~~~~~~~~ 374 (419)
..++++...+.
T Consensus 536 ~~t~~~~~~i~ 546 (567)
T 1qks_A 536 DKTLELKHVIK 546 (567)
T ss_dssp TTTTEEEEEEC
T ss_pred CCCceEEEEeC
Confidence 99998877664
No 178
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.87 E-value=2.4e-19 Score=154.78 Aligned_cols=245 Identities=11% Similarity=0.105 Sum_probs=179.4
Q ss_pred CccEeEEEECCCCCEEEEEecCC-----------------------CeEEEEEcCCCeEEEecc--CCCCeeeEEEccCC
Q 014755 90 LAGIAYARWSPDSRHILTTSDFQ-----------------------LRLTVWSLLNTACVHVQS--PKHASKGVAFTQDG 144 (419)
Q Consensus 90 ~~~v~~~~~~~~~~~l~~~~~~~-----------------------~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~ 144 (419)
...+.+++++|+|+.+++...+. +.|.+||..+++...... .-.....++++|+|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 35689999999999887776552 269999999888776332 23467899999999
Q ss_pred CEEEEEeecCCCCeEEEEeccCCe-EEEEEe---------ccccceeeeeECC-CCCeEEEEcCCCCceEEEEcCCCceE
Q 014755 145 KFAAICTRRDCKDYINLLSCHTWE-IMGVFA---------VDTLDLADIEWSP-DDSAIVIWDSPLEYKVLIYSPDGRCL 213 (419)
Q Consensus 145 ~~l~~~~~~~~~g~v~i~d~~~~~-~~~~~~---------~~~~~v~~~~~~~-~~~~l~~~~~~~~~~i~~~d~~~~~~ 213 (419)
+.+++...+ +.|++||..... .+..+. .+......++++| ++..+++ +...++.|++|+.+|+.+
T Consensus 103 ~l~v~d~~~---~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~-d~~~~~~I~~~~~~g~~~ 178 (329)
T 3fvz_A 103 NYWVTDVAL---HQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVS-DGYCNSRIVQFSPSGKFV 178 (329)
T ss_dssp CEEEEETTT---TEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEE-ECSSCCEEEEECTTSCEE
T ss_pred CEEEEECCC---CEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEE-eCCCCCeEEEEcCCCCEE
Confidence 966665543 799999986542 344442 2234688999999 5555444 432578999999999888
Q ss_pred EEEeecCC--------CCceeEEEEccC-CCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccc
Q 014755 214 LKYQAYES--------GLGVKSISWSPC-GQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQL 284 (419)
Q Consensus 214 ~~~~~~~~--------~~~v~~~~~s~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (419)
..+..... ...+..++++|+ ++++++...++.|++|+..+++.+..+...
T Consensus 179 ~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~--------------------- 237 (329)
T 3fvz_A 179 TQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHA--------------------- 237 (329)
T ss_dssp EEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCT---------------------
T ss_pred EEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecc---------------------
Confidence 87754322 124889999998 677777777889999999888877766411
Q ss_pred cceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEcc------CCeEEEEecCCCCce
Q 014755 285 DMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSS------DSQYICTRNDSMPTT 358 (419)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~------~g~~l~~~~~d~~~~ 358 (419)
.+...+..++|+| +|+.+++...+ ..
T Consensus 238 ----------------------------------------------~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~--~~ 269 (329)
T 3fvz_A 238 ----------------------------------------------SFGRNVFAISYIPGFLFAVNGKPYFGDQEP--VQ 269 (329)
T ss_dssp ----------------------------------------------TTTTCEEEEEEETTEEEEEECCCCTTCSCC--CC
T ss_pred ----------------------------------------------ccCCCcceeeecCCEEEEeCCCEEeccCCC--cE
Confidence 1233466788888 33333333333 68
Q ss_pred EEEeeccCCCceeec----ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCC
Q 014755 359 LWIWDICRQEPAAIL----VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSG 407 (419)
Q Consensus 359 i~iwd~~~~~~~~~~----~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~ 407 (419)
|++|+..+++++..+ ++...+..++++|+|.++++...+++|++|++.+
T Consensus 270 v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 270 GFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 999999999988876 3667799999999998888888999999999874
No 179
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.86 E-value=2.1e-18 Score=146.05 Aligned_cols=242 Identities=10% Similarity=0.059 Sum_probs=172.5
Q ss_pred cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEecc------CCCCeeeEEE-ccCCCEEEEEee-cCCCCeE
Q 014755 88 EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQS------PKHASKGVAF-TQDGKFAAICTR-RDCKDYI 159 (419)
Q Consensus 88 ~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~------~~~~~~~~~~-~~~~~~l~~~~~-~~~~g~v 159 (419)
++...+.+++++++++.+++...++ .|.+||........+.. +...+..+++ .+++..+++... + +.|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~-~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~---~~i 102 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNH-RIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPT---HQI 102 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGT-EEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGG---CEE
T ss_pred CccCCCceEEECCCCCEEEEECCCC-EEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCC---CEE
Confidence 3445688999999998777666665 99999988443333322 2245688999 466666555432 3 689
Q ss_pred EEEeccCCeEEEEEec-cccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEE
Q 014755 160 NLLSCHTWEIMGVFAV-DTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLA 238 (419)
Q Consensus 160 ~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 238 (419)
++|| .+++.+..+.. +...+..++++|+|+.++. ...++.|++||.+++.+..+........+.+++++|+|++++
T Consensus 103 ~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~--~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v 179 (286)
T 1q7f_A 103 QIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVV--ECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFI 179 (286)
T ss_dssp EEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEE--ETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEE
T ss_pred EEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEE--ECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEE
Confidence 9999 55666666543 3356889999999986555 344789999999888777775433333689999999999877
Q ss_pred EEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCC
Q 014755 239 VGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPI 318 (419)
Q Consensus 239 ~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (419)
+...++.|++||.. ++.+..+...
T Consensus 180 ~~~~~~~i~~~~~~-g~~~~~~~~~------------------------------------------------------- 203 (286)
T 1q7f_A 180 SDNRAHCVKVFNYE-GQYLRQIGGE------------------------------------------------------- 203 (286)
T ss_dssp EEGGGTEEEEEETT-CCEEEEESCT-------------------------------------------------------
T ss_pred EECCCCEEEEEcCC-CCEEEEEccC-------------------------------------------------------
Confidence 77778999999964 4444433210
Q ss_pred CCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCc-eEEEeeccCCCceeecc-cC--CCeeEEEeCCCCCeEEEE
Q 014755 319 SLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPT-TLWIWDICRQEPAAILV-QK--DPIRAATWDPTCTRLVLC 394 (419)
Q Consensus 319 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~-~i~iwd~~~~~~~~~~~-~~--~~v~~~~~s~~~~~l~s~ 394 (419)
++...+..++++|+|+++++...+ + .|.+||.. ++.+..+. +. ..+.+++++|+|+++++
T Consensus 204 ------------g~~~~p~~i~~d~~G~l~v~~~~~--~~~i~~~~~~-g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs- 267 (286)
T 1q7f_A 204 ------------GITNYPIGVGINSNGEILIADNHN--NFNLTIFTQD-GQLISALESKVKHAQCFDVALMDDGSVVLA- 267 (286)
T ss_dssp ------------TTSCSEEEEEECTTCCEEEEECSS--SCEEEEECTT-SCEEEEEEESSCCSCEEEEEEETTTEEEEE-
T ss_pred ------------CccCCCcEEEECCCCCEEEEeCCC--CEEEEEECCC-CCEEEEEcccCCCCcceeEEECCCCcEEEE-
Confidence 112346789999999988888765 6 99999964 55544442 32 34789999999987776
Q ss_pred eCCCcEEEeecCCC
Q 014755 395 TGSSHLYMWTPSGA 408 (419)
Q Consensus 395 ~~dg~i~vw~~~~~ 408 (419)
+.|++|++|++...
T Consensus 268 ~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 268 SKDYRLYIYRYVQL 281 (286)
T ss_dssp ETTTEEEEEECSCC
T ss_pred CCCCeEEEEEcccc
Confidence 67999999998653
No 180
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.86 E-value=2.5e-18 Score=145.55 Aligned_cols=232 Identities=10% Similarity=0.090 Sum_probs=168.4
Q ss_pred eEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEee-------cCcceeEEEEe-cCCCeEEEEeccCCeEEEEEccCCcce
Q 014755 13 SCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFS-------CLDKISYIEWA-LDSEYILCGLYKRLMIQAWSLTQPEWT 83 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~-------~~~~v~~~~~s-~~~~~l~~~~~~~g~i~iw~~~~~~~~ 83 (419)
++++|+|+++++.. ++.|.+||.. ++.+..+. +...+..++++ ++++++++....++.|.+|| .+++.+
T Consensus 35 v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~ 112 (286)
T 1q7f_A 35 VAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFV 112 (286)
T ss_dssp EEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEE
T ss_pred EEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEE
Confidence 88999999877765 7889999987 55555543 23568899995 67766666543137999999 566666
Q ss_pred eeeec-CCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEec--cCCCCeeeEEEccCCCEEEEEeecCCCCeEE
Q 014755 84 CKIDE-GLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQ--SPKHASKGVAFTQDGKFAAICTRRDCKDYIN 160 (419)
Q Consensus 84 ~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~ 160 (419)
..+.. +...+..++++|+|+.+++...++ .|.+||........+. .....+..++++++++.+++...+ +.|+
T Consensus 113 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~-~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~---~~i~ 188 (286)
T 1q7f_A 113 RKFGATILQHPRGVTVDNKGRIIVVECKVM-RVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRA---HCVK 188 (286)
T ss_dssp EEECTTTCSCEEEEEECTTSCEEEEETTTT-EEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGG---TEEE
T ss_pred EEecCccCCCceEEEEeCCCCEEEEECCCC-EEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCC---CEEE
Confidence 55533 335689999999998666655555 9999997644333332 333457899999999866655544 7999
Q ss_pred EEeccCCeEEEEEecc--ccceeeeeECCCCCeEEEEcCCCCc-eEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeE
Q 014755 161 LLSCHTWEIMGVFAVD--TLDLADIEWSPDDSAIVIWDSPLEY-KVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFL 237 (419)
Q Consensus 161 i~d~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~~~~~-~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 237 (419)
+||.. ++.+..+... ...+..++++++|+.++. ...++ .|.+||.+++.+..+..+.....+.+++++|+|+++
T Consensus 189 ~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~--~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~l~ 265 (286)
T 1q7f_A 189 VFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIA--DNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSVV 265 (286)
T ss_dssp EEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEE--ECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEEEETTTEEE
T ss_pred EEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEE--eCCCCEEEEEECCCCCEEEEEcccCCCCcceeEEECCCCcEE
Confidence 99975 5555555433 256889999999976665 33354 999999988888888765543357899999999877
Q ss_pred EEEEecCcEEEEEcCCc
Q 014755 238 AVGSYDQTLRVLNHLTW 254 (419)
Q Consensus 238 ~~~~~d~~i~v~d~~~~ 254 (419)
++ +.+++|++|++...
T Consensus 266 vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 266 LA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp EE-ETTTEEEEEECSCC
T ss_pred EE-CCCCeEEEEEcccc
Confidence 66 57899999997653
No 181
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.86 E-value=1.1e-18 Score=166.51 Aligned_cols=280 Identities=10% Similarity=0.004 Sum_probs=190.0
Q ss_pred cCCCeEEEEeccCC----eEEEEEccCCcceeeee------cCCccEeEEEECCCCCEEEEEecCCC----eEEEEEcCC
Q 014755 57 LDSEYILCGLYKRL----MIQAWSLTQPEWTCKID------EGLAGIAYARWSPDSRHILTTSDFQL----RLTVWSLLN 122 (419)
Q Consensus 57 ~~~~~l~~~~~~~g----~i~iw~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~~~~----~i~iwd~~~ 122 (419)
|+|++++....+.+ .+.+.+...++....+. .+...+..++|||||++|+.+..++| .|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 89999987765433 34444444454332221 12335889999999999998865443 799999999
Q ss_pred CeEEEeccCCCCeeeEEEccCCCEEEEEeecCC-------------CCeEEEEeccCCeEE--EEEec--cccceeeeeE
Q 014755 123 TACVHVQSPKHASKGVAFTQDGKFAAICTRRDC-------------KDYINLLSCHTWEIM--GVFAV--DTLDLADIEW 185 (419)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-------------~g~v~i~d~~~~~~~--~~~~~--~~~~v~~~~~ 185 (419)
++..........+..++|+|||+.|+++..+.. ...|++|++.+++.. ..+.. +...+..+.|
T Consensus 161 g~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~ 240 (710)
T 2xdw_A 161 AKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAEL 240 (710)
T ss_dssp TEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEE
T ss_pred CCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEE
Confidence 988763333333678999999999999887632 124999999886521 22222 3445788999
Q ss_pred CCCCCeEEEEcCCC---CceEEEEcC-C------Cc-eEEEEeecCCCCceeEEEEccCCCeEEEEEecC----cEEEEE
Q 014755 186 SPDDSAIVIWDSPL---EYKVLIYSP-D------GR-CLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQ----TLRVLN 250 (419)
Q Consensus 186 ~~~~~~l~~~~~~~---~~~i~~~d~-~------~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~----~i~v~d 250 (419)
+|||++|++..... +..|++||+ + +. ....+..+.. .+.. .|+|+|+.|+..+..+ .|.+||
T Consensus 241 SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~--~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d 317 (710)
T 2xdw_A 241 SDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFE--GEYD-YVTNEGTVFTFKTNRHSPNYRLINID 317 (710)
T ss_dssp CTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS--SCEE-EEEEETTEEEEEECTTCTTCEEEEEE
T ss_pred cCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCC--cEEE-EEeccCCEEEEEECCCCCCCEEEEEe
Confidence 99999988743221 578999999 4 43 4555655443 3433 5889999888776543 589999
Q ss_pred cCCcee--eeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCC
Q 014755 251 HLTWKT--FAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTD 328 (419)
Q Consensus 251 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (419)
+.+++. ...+..
T Consensus 318 ~~~~~~~~~~~l~~------------------------------------------------------------------ 331 (710)
T 2xdw_A 318 FTDPEESKWKVLVP------------------------------------------------------------------ 331 (710)
T ss_dssp TTSCCGGGCEEEEC------------------------------------------------------------------
T ss_pred CCCCCcccceeccC------------------------------------------------------------------
Confidence 876531 111110
Q ss_pred CCCCC-cceEEEEEccCCeEEEEecCCCCc--eEEEeeccCCCceeec-ccCCCeeEEEeCCCCCeEEEE-e---CCCcE
Q 014755 329 KPNPK-QGIGLMSWSSDSQYICTRNDSMPT--TLWIWDICRQEPAAIL-VQKDPIRAATWDPTCTRLVLC-T---GSSHL 400 (419)
Q Consensus 329 ~~~~~-~~v~~~~~s~~g~~l~~~~~d~~~--~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~-~---~dg~i 400 (419)
.+. ..+..++|++++.++++...+ + .|++|++.+++....+ .+.+.+..++++|+++.|+.. + ..++|
T Consensus 332 --~~~~~~~~~~~~~~~~~lv~~~~~~--g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i 407 (710)
T 2xdw_A 332 --EHEKDVLEWVACVRSNFLVLCYLHD--VKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGII 407 (710)
T ss_dssp --CCSSCEEEEEEEETTTEEEEEEEET--TEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEE
T ss_pred --CCCCCeEEEEEEEcCCEEEEEEEEC--CEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEE
Confidence 011 246788999888888888877 6 4677787677754444 367788999999999866533 2 35789
Q ss_pred EEeecCCCe
Q 014755 401 YMWTPSGAY 409 (419)
Q Consensus 401 ~vw~~~~~~ 409 (419)
++||+.+++
T Consensus 408 ~~~d~~tg~ 416 (710)
T 2xdw_A 408 YHCDLTKEE 416 (710)
T ss_dssp EEEETTSSS
T ss_pred EEEECCCCc
Confidence 999998766
No 182
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.85 E-value=1.9e-18 Score=148.45 Aligned_cols=293 Identities=14% Similarity=0.018 Sum_probs=199.7
Q ss_pred eEEcCCCCEEEEEe------CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEec---------cCCeEEEEEc
Q 014755 13 SCFSPNARYIAVAV------DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLY---------KRLMIQAWSL 77 (419)
Q Consensus 13 ~~~s~d~~~la~~~------~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---------~~g~i~iw~~ 77 (419)
....||++.+++.. ++.|.++|..+++.+..+....... ++++|||++++++.. +++.|.+||.
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 45679999999885 3579999999999998776333334 999999999988752 2258999999
Q ss_pred cCCcceeeeecCC-------ccEeEEEECCCCCEEEEEec-CCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEE
Q 014755 78 TQPEWTCKIDEGL-------AGIAYARWSPDSRHILTTSD-FQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAA 148 (419)
Q Consensus 78 ~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~~-~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~ 148 (419)
.+++.+..+.-.. .....++|+|||++++++.. ..+.|.++|+.+++.+. +... . . ...+....+.++
T Consensus 117 ~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~-g-~-~~~~P~g~~~~~ 193 (386)
T 3sjl_D 117 VTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP-D-C-YHIFPTAPDTFF 193 (386)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC-S-E-EEEEEEETTEEE
T ss_pred CCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC-C-c-ceeecCCCceeE
Confidence 9998887764321 24567999999999998874 23499999999999887 4322 1 1 122322335555
Q ss_pred EEeecCCCCeEEEEeccC-CeEEEEEecc----ccce-eeeeE-CCCCCeEEEEcCCCCceEEEEcCCCce---EEEEee
Q 014755 149 ICTRRDCKDYINLLSCHT-WEIMGVFAVD----TLDL-ADIEW-SPDDSAIVIWDSPLEYKVLIYSPDGRC---LLKYQA 218 (419)
Q Consensus 149 ~~~~~~~~g~v~i~d~~~-~~~~~~~~~~----~~~v-~~~~~-~~~~~~l~~~~~~~~~~i~~~d~~~~~---~~~~~~ 218 (419)
+.+.| |.+.+.++.+ ++........ ..++ ....| .++|+++++ +.++.+++.|..+.. ...+..
T Consensus 194 ~~~~D---G~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~v---s~~g~V~v~d~~~~~~~v~~~~~~ 267 (386)
T 3sjl_D 194 MHCRD---GSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWP---TYTGKIHQIDLSSGDAKFLPAVEA 267 (386)
T ss_dssp EEETT---SCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEE---BTTSEEEEEECTTSSCEECCCEES
T ss_pred EECCC---CCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEE---eCCCEEEEEECCCCcceeecceec
Confidence 55555 6777777765 4432211111 1122 12455 367766665 336899999994432 222220
Q ss_pred cC--------CCCceeEEEEccCCCeEEEEEe----------cCcEEEEEcCCceeeeeecccccccCCCccceeccCCC
Q 014755 219 YE--------SGLGVKSISWSPCGQFLAVGSY----------DQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDE 280 (419)
Q Consensus 219 ~~--------~~~~v~~~~~s~~~~~l~~~~~----------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (419)
.. .......++++|+++.++.... .+.|.++|+.+++.++.+.-.
T Consensus 268 ~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg----------------- 330 (386)
T 3sjl_D 268 LTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG----------------- 330 (386)
T ss_dssp SCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-----------------
T ss_pred cccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC-----------------
Confidence 00 0113445888999988877653 257999999999998887511
Q ss_pred cccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCe-EEEEec-CCCCce
Q 014755 281 PLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQ-YICTRN-DSMPTT 358 (419)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~-~d~~~~ 358 (419)
..+..+++++|++ +|++.. .+ +.
T Consensus 331 -----------------------------------------------------~~~~~lavs~D~~~~ly~tn~~~--~~ 355 (386)
T 3sjl_D 331 -----------------------------------------------------HEIDSINVSQDEKPLLYALSTGD--KT 355 (386)
T ss_dssp -----------------------------------------------------EEECEEEECSSSSCEEEEEETTT--TE
T ss_pred -----------------------------------------------------CCcceEEECCCCCeEEEEEcCCC--Ce
Confidence 1256799999997 666654 35 99
Q ss_pred EEEeeccCCCceeecccCCCeeEEEeCCC
Q 014755 359 LWIWDICRQEPAAILVQKDPIRAATWDPT 387 (419)
Q Consensus 359 i~iwd~~~~~~~~~~~~~~~v~~~~~s~~ 387 (419)
|.++|..+++.+..+...+..+.+.+++|
T Consensus 356 VsViD~~t~k~~~~i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 356 LYIHDAESGEELRSVNQLGHGPQVITTAD 384 (386)
T ss_dssp EEEEETTTCCEEEEECCCCSSCCEEEECC
T ss_pred EEEEECCCCcEEEEecCCCCCceeEECCc
Confidence 99999999999988877777777777776
No 183
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.85 E-value=6.1e-19 Score=167.91 Aligned_cols=234 Identities=14% Similarity=0.074 Sum_probs=157.0
Q ss_pred EEcCCCCEEEEEe-CC-----eEEEEecCCCcEEEEee-------cCcceeEEEEecCCCeEEEEeccC----CeEEEEE
Q 014755 14 CFSPNARYIAVAV-DY-----RLVVRDAHSFKVVQLFS-------CLDKISYIEWALDSEYILCGLYKR----LMIQAWS 76 (419)
Q Consensus 14 ~~s~d~~~la~~~-~~-----~i~i~~~~~~~~~~~~~-------~~~~v~~~~~s~~~~~l~~~~~~~----g~i~iw~ 76 (419)
..+|+|++++... ++ .|++.+..+++...++. |...+..++|||||++||.+.... ..|++||
T Consensus 74 ~p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~d 153 (695)
T 2bkl_A 74 TPSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVID 153 (695)
T ss_dssp CCEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEE
T ss_pred CCEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEE
Confidence 4568999999886 22 25555666666555553 334689999999999999765432 4899999
Q ss_pred ccCCcceeeeecCCccE--eEEEECCCCCEEEEEecCCC------------eEEEEEcCCCe----EEE-eccCCCCeee
Q 014755 77 LTQPEWTCKIDEGLAGI--AYARWSPDSRHILTTSDFQL------------RLTVWSLLNTA----CVH-VQSPKHASKG 137 (419)
Q Consensus 77 ~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~~~~------------~i~iwd~~~~~----~~~-~~~~~~~~~~ 137 (419)
+.+++.+. ..+...+ ..++|+|||+.|++++.+.. .|++|++.+++ .+. ...+...+..
T Consensus 154 l~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~ 231 (695)
T 2bkl_A 154 VDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQ 231 (695)
T ss_dssp TTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEE
T ss_pred CCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEE
Confidence 99988641 1111222 67999999999999987651 39999998865 222 2223356789
Q ss_pred EEEccCCCEEEEEeecC-CCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCC-CCceEEEEcC-CCce--
Q 014755 138 VAFTQDGKFAAICTRRD-CKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSP-LEYKVLIYSP-DGRC-- 212 (419)
Q Consensus 138 ~~~~~~~~~l~~~~~~~-~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~~~~i~~~d~-~~~~-- 212 (419)
+.|+|||++|++.+.+. ....|++++..+++. ..+..+...+....+ ++|.+++..+.. .++.|++||+ ++..
T Consensus 232 ~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~ 309 (695)
T 2bkl_A 232 SDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARAS 309 (695)
T ss_dssp EEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGG
T ss_pred EEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccC
Confidence 99999999999888763 223788887665543 344444455566666 566633332211 3589999999 4442
Q ss_pred EEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcC
Q 014755 213 LLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHL 252 (419)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~ 252 (419)
...+..+.....+..++|+ ++.++++...|+..++|.+.
T Consensus 310 ~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 310 WKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp CEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred CeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 2344433322367888888 67788888889888887654
No 184
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.85 E-value=1.3e-17 Score=143.63 Aligned_cols=276 Identities=8% Similarity=-0.010 Sum_probs=189.0
Q ss_pred CCeEEEEecCCCcEEEEee-------cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEEC
Q 014755 27 DYRLVVRDAHSFKVVQLFS-------CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWS 99 (419)
Q Consensus 27 ~~~i~i~~~~~~~~~~~~~-------~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~ 99 (419)
++.|.++|.++++....+. .......+.+. +..+.++...++.|.+||..+++.+.++. .......++++
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~ 92 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFL 92 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEe
Confidence 5689999999998766431 12345777774 34455444445899999999999888774 34567899999
Q ss_pred CCCCEEEEEe-cCCCeEEEEEcCCCeEEE-eccCC-----CCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEE
Q 014755 100 PDSRHILTTS-DFQLRLTVWSLLNTACVH-VQSPK-----HASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGV 172 (419)
Q Consensus 100 ~~~~~l~~~~-~~~~~i~iwd~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~ 172 (419)
+++ .++++. .++ .|.+||.++++... +.... .....+++ ++..++++... ..+.|.++|+.+++.+..
T Consensus 93 ~~g-~lyv~~~~~~-~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~-~~~~v~viD~~t~~~~~~ 167 (328)
T 3dsm_A 93 SDE-KAYVTQIWDY-RIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWS-YQNRILKIDTETDKVVDE 167 (328)
T ss_dssp ETT-EEEEEEBSCS-EEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECT-TCCEEEEEETTTTEEEEE
T ss_pred CCC-eEEEEECCCC-eEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCC-CCCEEEEEECCCCeEEEE
Confidence 998 555555 455 99999999988776 33222 14567777 45556555431 126999999999998887
Q ss_pred EeccccceeeeeECCCCCeEEEEcCCC--------CceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEec
Q 014755 173 FAVDTLDLADIEWSPDDSAIVIWDSPL--------EYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYD 243 (419)
Q Consensus 173 ~~~~~~~v~~~~~~~~~~~l~~~~~~~--------~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 243 (419)
+... .....+.++|+|+++++..... .+.|.++|. +++....+..... ..+..++++|++++|+++..
T Consensus 168 i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g-~~p~~la~~~d~~~lyv~~~- 244 (328)
T 3dsm_A 168 LTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLG-DWPSEVQLNGTRDTLYWINN- 244 (328)
T ss_dssp EECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTT-CCCEEEEECTTSCEEEEESS-
T ss_pred EEcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCC-CCceeEEEecCCCEEEEEcc-
Confidence 7653 3467899999998666522110 278999999 6776666654321 25889999999998887754
Q ss_pred CcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCC
Q 014755 244 QTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQ 323 (419)
Q Consensus 244 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (419)
.|.+||..+++...... +
T Consensus 245 -~v~~~d~~t~~~~~~~~----~--------------------------------------------------------- 262 (328)
T 3dsm_A 245 -DIWRMPVEADRVPVRPF----L--------------------------------------------------------- 262 (328)
T ss_dssp -SEEEEETTCSSCCSSCS----B---------------------------------------------------------
T ss_pred -EEEEEECCCCceeeeee----e---------------------------------------------------------
Confidence 89999988766421100 0
Q ss_pred CCCCCCCCCCcceEEEEEcc-CCeEEEEe----cCCCCceEEEeeccCCCceeecccCCCeeEEEe
Q 014755 324 KPPTDKPNPKQGIGLMSWSS-DSQYICTR----NDSMPTTLWIWDICRQEPAAILVQKDPIRAATW 384 (419)
Q Consensus 324 ~~~~~~~~~~~~v~~~~~s~-~g~~l~~~----~~d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~ 384 (419)
.........++++| +++++++. ..+ +.|.+||.. ++++..+.-......++|
T Consensus 263 ------~~~~~~p~gi~vdp~~g~lyva~~~~y~~~--~~V~v~d~~-g~~~~~i~~G~~P~~~~~ 319 (328)
T 3dsm_A 263 ------EFRDTKYYGLTVNPNNGEVYVADAIDYQQQ--GIVYRYSPQ-GKLIDEFYVGIIPGAFCW 319 (328)
T ss_dssp ------CCCSSCEEEEEECTTTCCEEEEECTTSSSE--EEEEEECTT-CCEEEEEEEEESEEEEEE
T ss_pred ------cCCCCceEEEEEcCCCCeEEEEcccccccC--CEEEEECCC-CCEEEEEEeccCcceEEE
Confidence 00122357899999 55555555 455 999999998 887776654444555555
No 185
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.85 E-value=1.4e-18 Score=150.04 Aligned_cols=239 Identities=10% Similarity=0.036 Sum_probs=171.9
Q ss_pred ccccCeEEcCCCCEEEEEeCC-------------------------eEEEEecCCCcEEEEee--cCcceeEEEEecCCC
Q 014755 8 KQTGPSCFSPNARYIAVAVDY-------------------------RLVVRDAHSFKVVQLFS--CLDKISYIEWALDSE 60 (419)
Q Consensus 8 ~~~~~~~~s~d~~~la~~~~~-------------------------~i~i~~~~~~~~~~~~~--~~~~v~~~~~s~~~~ 60 (419)
+....++++|+|+++++...+ +|.+||..+++++..+. +......++++|+|+
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~ 103 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN 103 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC
Confidence 344459999999999888744 69999999999887665 345789999999999
Q ss_pred eEEEEeccCCeEEEEEccCCc-ceeeee---------cCCccEeEEEECC-CCCEEEEEe-cCCCeEEEEEcCCCeEEE-
Q 014755 61 YILCGLYKRLMIQAWSLTQPE-WTCKID---------EGLAGIAYARWSP-DSRHILTTS-DFQLRLTVWSLLNTACVH- 127 (419)
Q Consensus 61 ~l~~~~~~~g~i~iw~~~~~~-~~~~~~---------~~~~~v~~~~~~~-~~~~l~~~~-~~~~~i~iwd~~~~~~~~- 127 (419)
++++...+ +.|++|+..... .+..+. .+...+..++++| ++..+++.+ .++ .|++|+. +++...
T Consensus 104 l~v~d~~~-~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~-~I~~~~~-~g~~~~~ 180 (329)
T 3fvz_A 104 YWVTDVAL-HQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNS-RIVQFSP-SGKFVTQ 180 (329)
T ss_dssp EEEEETTT-TEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCC-EEEEECT-TSCEEEE
T ss_pred EEEEECCC-CEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCC-eEEEEcC-CCCEEEE
Confidence 77766654 799999986542 344442 3334688999999 677666665 455 9999995 455444
Q ss_pred eccCC----------CCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEec--cccceeeeeECCCCCeEEEE
Q 014755 128 VQSPK----------HASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAV--DTLDLADIEWSPDDSAIVIW 195 (419)
Q Consensus 128 ~~~~~----------~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~ 195 (419)
+.... .....++++|++..++++... .+.|++||..+++.+..+.. +...+..++++| + .++..
T Consensus 181 ~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~--~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g-~~~~~ 256 (329)
T 3fvz_A 181 WGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE--NGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-G-FLFAV 256 (329)
T ss_dssp ECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT--TTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-T-EEEEE
T ss_pred eccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC--CCEEEEEECCCCcEEEEEeccccCCCcceeeecC-C-EEEEe
Confidence 32221 236899999995555555433 37999999998888887743 445688899999 3 22222
Q ss_pred cC------CCCceEEEEcC-CCceEEEEee-cCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCC
Q 014755 196 DS------PLEYKVLIYSP-DGRCLLKYQA-YESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLT 253 (419)
Q Consensus 196 ~~------~~~~~i~~~d~-~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~ 253 (419)
++ ..+..+++|+. +++.+..+.. ..+...+.+++++|+|.++++...++.|++|++..
T Consensus 257 ~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 257 NGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp ECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred CCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 22 23468999998 8888877742 12233689999999998888888889999999764
No 186
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.84 E-value=1.4e-18 Score=150.50 Aligned_cols=278 Identities=11% Similarity=0.037 Sum_probs=187.9
Q ss_pred cceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE
Q 014755 48 DKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH 127 (419)
Q Consensus 48 ~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~ 127 (419)
..|.++.|+|++..++..+.+ +.++.| .++....+..+...+.+++|+++++.+++...++ .|.+||.++++...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~-~i~~~d~~~~~~~~ 80 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISE-SELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEG-NIFKINPETKEIKR 80 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCG-GGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTC-EEEEECTTTCCEEE
T ss_pred cccceeeecCCccceeEEeec-ccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCC-EEEEEeCCCCcEEE
Confidence 457889999998877766655 688888 3445556666777789999999999666666655 99999999888766
Q ss_pred ec-cCCCCeeeEEEccCCCEEEEEeec-CCCCeEEEEeccCCeEEEEEe--ccccceeeeeECCCCCeEEEEcCC----C
Q 014755 128 VQ-SPKHASKGVAFTQDGKFAAICTRR-DCKDYINLLSCHTWEIMGVFA--VDTLDLADIEWSPDDSAIVIWDSP----L 199 (419)
Q Consensus 128 ~~-~~~~~~~~~~~~~~~~~l~~~~~~-~~~g~v~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~----~ 199 (419)
+. .....+.+++++|+++++++...+ ...+.|.+||.++++....+. .....+..++++|+|+.++..... .
T Consensus 81 ~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~ 160 (333)
T 2dg1_A 81 PFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNP 160 (333)
T ss_dssp EEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBC
T ss_pred EeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCC
Confidence 33 456778999999999877665431 001479999998776543332 233568899999999876652210 1
Q ss_pred CceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEE-EecCcEEEEEcCC-ceeeeeecccccccCCCccceecc
Q 014755 200 EYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVG-SYDQTLRVLNHLT-WKTFAEFMHLSTVRGPCFPAVFKE 277 (419)
Q Consensus 200 ~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d~~i~v~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 277 (419)
.+.|+.++..+..+..+..... .+..++|+|+|+.|+.+ +.++.|++||+.+ ++.+..+..... ..
T Consensus 161 ~~~l~~~~~~~~~~~~~~~~~~--~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~---------~~- 228 (333)
T 2dg1_A 161 LGGVYYVSPDFRTVTPIIQNIS--VANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIP---------YY- 228 (333)
T ss_dssp CEEEEEECTTSCCEEEEEEEES--SEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEE---------EE-
T ss_pred CceEEEEeCCCCEEEEeecCCC--cccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEE---------Ee-
Confidence 3678888885433333332222 57899999999866554 4578999999863 332222110000 00
Q ss_pred CCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCc
Q 014755 278 VDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPT 357 (419)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~ 357 (419)
..++ ..+..++++++|+++++...+ +
T Consensus 229 ---------------------------------------------------~~~~-~~~~~i~~d~~G~l~v~~~~~--~ 254 (333)
T 2dg1_A 229 ---------------------------------------------------FTGH-EGPDSCCIDSDDNLYVAMYGQ--G 254 (333)
T ss_dssp ---------------------------------------------------CCSS-SEEEEEEEBTTCCEEEEEETT--T
T ss_pred ---------------------------------------------------cCCC-CCCCceEECCCCCEEEEEcCC--C
Confidence 0001 235779999999988887766 8
Q ss_pred eEEEeeccCCCceeecc-cCC------CeeEEEeCCCCCeEEEEeCC
Q 014755 358 TLWIWDICRQEPAAILV-QKD------PIRAATWDPTCTRLVLCTGS 397 (419)
Q Consensus 358 ~i~iwd~~~~~~~~~~~-~~~------~v~~~~~s~~~~~l~s~~~d 397 (419)
.|.+||.. ++....+. +.. .+.+++|+||++.|+.++.+
T Consensus 255 ~v~~~d~~-g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 255 RVLVFNKR-GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEEEECTT-SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred EEEEECCC-CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 99999984 55554443 222 68999999998777655554
No 187
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.83 E-value=1.5e-18 Score=165.14 Aligned_cols=282 Identities=9% Similarity=-0.067 Sum_probs=182.9
Q ss_pred ecCCCeEEEEeccCC----eEEEEEccCCcceeeee------cCCccEeEEEECCCCCEEEEEecC----CCeEEEEEcC
Q 014755 56 ALDSEYILCGLYKRL----MIQAWSLTQPEWTCKID------EGLAGIAYARWSPDSRHILTTSDF----QLRLTVWSLL 121 (419)
Q Consensus 56 s~~~~~l~~~~~~~g----~i~iw~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~~----~~~i~iwd~~ 121 (419)
+|+|++++....+.+ .+.+.+...++....+. +|...+..++|||||++|+.+... ...|++||+.
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~ 155 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVD 155 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETT
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECC
Confidence 489999998876533 34444444554332222 233468999999999999966432 2389999999
Q ss_pred CCeEE-EeccCCCCeeeEEEccCCCEEEEEeecCC----------CCeEEEEeccCCe----EEEEEeccccceeeeeEC
Q 014755 122 NTACV-HVQSPKHASKGVAFTQDGKFAAICTRRDC----------KDYINLLSCHTWE----IMGVFAVDTLDLADIEWS 186 (419)
Q Consensus 122 ~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----------~g~v~i~d~~~~~----~~~~~~~~~~~v~~~~~~ 186 (419)
+++.+ ...........++|+|||+.|++++.+.. ...|++|++.+++ .+.....+...+..+.|+
T Consensus 156 tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~S 235 (695)
T 2bkl_A 156 SGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLS 235 (695)
T ss_dssp TCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEEC
T ss_pred CCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEEC
Confidence 98865 21111112268999999999999887531 2349999998865 333333344578899999
Q ss_pred CCCCeEEEEcCC--CCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEe----cCcEEEEEcCCcee--ee
Q 014755 187 PDDSAIVIWDSP--LEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSY----DQTLRVLNHLTWKT--FA 258 (419)
Q Consensus 187 ~~~~~l~~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----d~~i~v~d~~~~~~--~~ 258 (419)
|||++|++.... ....|++++..+.....+..+.. .+....+ ++|+ ++..+. ++.|.+||+.+++. ..
T Consensus 236 pDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~--~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~ 311 (695)
T 2bkl_A 236 RDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVG--AKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWK 311 (695)
T ss_dssp TTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSS--CCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCE
T ss_pred CCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCC--ceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCe
Confidence 999998874322 13478888873334455554443 4556666 6677 555543 47899999876542 11
Q ss_pred eecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEE
Q 014755 259 EFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGL 338 (419)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 338 (419)
.+... .+...+..
T Consensus 312 ~l~~~-------------------------------------------------------------------~~~~~l~~ 324 (695)
T 2bkl_A 312 EIVPE-------------------------------------------------------------------DSSASLLS 324 (695)
T ss_dssp EEECC-------------------------------------------------------------------CSSCEEEE
T ss_pred EEecC-------------------------------------------------------------------CCCCeEEE
Confidence 11100 01234677
Q ss_pred EEEccCCeEEEEecCCCCceEEEeecc-CCCceeecc-c-CCCeeEEEeCCCCCeEEEE----eCCCcEEEeecCCCeEE
Q 014755 339 MSWSSDSQYICTRNDSMPTTLWIWDIC-RQEPAAILV-Q-KDPIRAATWDPTCTRLVLC----TGSSHLYMWTPSGAYCV 411 (419)
Q Consensus 339 ~~~s~~g~~l~~~~~d~~~~i~iwd~~-~~~~~~~~~-~-~~~v~~~~~s~~~~~l~s~----~~dg~i~vw~~~~~~~~ 411 (419)
++++ ++.++++...| +..+||.+. +++....+. + .+.+..++++|+++.|+.. ...++|++||+.+++..
T Consensus 325 ~~~~-~~~lv~~~~~d--g~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~ 401 (695)
T 2bkl_A 325 VSIV-GGHLSLEYLKD--ATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSE 401 (695)
T ss_dssp EEEE-TTEEEEEEEET--TEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEE
T ss_pred EEEE-CCEEEEEEEEC--CEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEE
Confidence 8888 77888888888 887777654 344443332 3 6678889999999866633 23578999999877653
No 188
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.82 E-value=4.3e-16 Score=135.93 Aligned_cols=277 Identities=9% Similarity=-0.057 Sum_probs=187.1
Q ss_pred eEEcCCCCEEEEEeC---C---eEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEec---------cCCeEEEEEc
Q 014755 13 SCFSPNARYIAVAVD---Y---RLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLY---------KRLMIQAWSL 77 (419)
Q Consensus 13 ~~~s~d~~~la~~~~---~---~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---------~~g~i~iw~~ 77 (419)
+...|+++++.+... + .|.++|..+++.+..+.-...- .++++|||++++++.. .++.|.+||.
T Consensus 26 ~~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~ 104 (373)
T 2mad_H 26 EAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDP 104 (373)
T ss_pred ccCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEEC
Confidence 445688887776642 2 7899999999988777633333 9999999999998862 2358999999
Q ss_pred cCCcceeeeecC-------CccEeEEEECCCCCEEEEEecC-CCeEEEEEcCCCeEEEe-ccCCCCeeeEEEccCCCE-E
Q 014755 78 TQPEWTCKIDEG-------LAGIAYARWSPDSRHILTTSDF-QLRLTVWSLLNTACVHV-QSPKHASKGVAFTQDGKF-A 147 (419)
Q Consensus 78 ~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~~-~~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~-l 147 (419)
.+.+.+..+... ......++|+|||++|+++... .+.|.++| .+++.... ..... ++.+.|+++. +
T Consensus 105 ~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~---~~~~~~~~~~~~ 180 (373)
T 2mad_H 105 VTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT---CYHIHPGAPSTF 180 (373)
T ss_pred CCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc---eEEEEeCCCceE
Confidence 988877665432 1234689999999999998753 34899999 98887654 33322 3555666643 3
Q ss_pred EEEeecCCCCeEEEEeccCCeEEEEEe-----ccccc-eeeeeECCCCCeEEEEcCCCCceEEEEcCCCc---eEEEEee
Q 014755 148 AICTRRDCKDYINLLSCHTWEIMGVFA-----VDTLD-LADIEWSPDDSAIVIWDSPLEYKVLIYSPDGR---CLLKYQA 218 (419)
Q Consensus 148 ~~~~~~~~~g~v~i~d~~~~~~~~~~~-----~~~~~-v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~---~~~~~~~ 218 (419)
++.+.+ |.+.++|. +++...... ....+ .....+.+++..+++. ...+.+.+.|..+. .+..+..
T Consensus 181 ~~~~~d---g~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~--~~~~~v~vid~~~~~~~v~~~~~~ 254 (373)
T 2mad_H 181 YLLCAQ---GGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWP--VYSGKILQADISAAGATNKAPIDA 254 (373)
T ss_pred EEEcCC---CCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEE--cCCceEEEEeccCCcceEeeeeee
Confidence 344443 78999999 776663322 11112 1234566666655542 34678999998332 2222221
Q ss_pred cC--------CCCceeEEEEccCCCeEEEEEe----------cCcEEEEEcCCceeeeeecccccccCCCccceeccCCC
Q 014755 219 YE--------SGLGVKSISWSPCGQFLAVGSY----------DQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDE 280 (419)
Q Consensus 219 ~~--------~~~~v~~~~~s~~~~~l~~~~~----------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (419)
.. .......++++|+++.+++... .+.|.++|+.+++.+..+...
T Consensus 255 ~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g----------------- 317 (373)
T 2mad_H 255 LSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG----------------- 317 (373)
T ss_pred cCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC-----------------
Confidence 10 0112445789999988777653 357999999999888876411
Q ss_pred cccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCe-EEEEec-CCCCce
Q 014755 281 PLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQ-YICTRN-DSMPTT 358 (419)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~-~d~~~~ 358 (419)
.....++|+|||+ +++++. .+ +.
T Consensus 318 -----------------------------------------------------~~p~~i~~s~Dg~~~l~v~~~~~--~~ 342 (373)
T 2mad_H 318 -----------------------------------------------------HDVDAISVAQDGGPDLYALSAGT--EV 342 (373)
T ss_pred -----------------------------------------------------CCcCeEEECCCCCeEEEEEcCCC--Ce
Confidence 1246799999999 677776 36 99
Q ss_pred EEEeeccCCCceee
Q 014755 359 LWIWDICRQEPAAI 372 (419)
Q Consensus 359 i~iwd~~~~~~~~~ 372 (419)
|.+||+.+++.+..
T Consensus 343 V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 343 LHIYDAGAGDQDQS 356 (373)
T ss_pred EEEEECCCCCEEee
Confidence 99999999998876
No 189
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.82 E-value=9e-17 Score=138.44 Aligned_cols=259 Identities=9% Similarity=0.009 Sum_probs=183.4
Q ss_pred CCeEEEEEccCCcceeeeec------CCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEcc
Q 014755 69 RLMIQAWSLTQPEWTCKIDE------GLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQ 142 (419)
Q Consensus 69 ~g~i~iw~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 142 (419)
++.|.++|.++++....+.. .......+.+. +..++.+....+.|.+||.++++.+...........+++++
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~ 93 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLS 93 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeC
Confidence 47999999999876544311 11335677773 44555554444499999999998876223456678999999
Q ss_pred CCCEEEEEe-ecCCCCeEEEEeccCCeEEEEEeccc-----cceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEE
Q 014755 143 DGKFAAICT-RRDCKDYINLLSCHTWEIMGVFAVDT-----LDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLK 215 (419)
Q Consensus 143 ~~~~l~~~~-~~~~~g~v~i~d~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~ 215 (419)
++ .++++. .+ +.|.+||+.+++....+.... .....+++ ++..+++.+...++.|.++|+ +++.+..
T Consensus 94 ~g-~lyv~~~~~---~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~ 167 (328)
T 3dsm_A 94 DE-KAYVTQIWD---YRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDE 167 (328)
T ss_dssp TT-EEEEEEBSC---SEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEE
T ss_pred CC-eEEEEECCC---CeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEE
Confidence 98 455554 43 799999999998887776543 14566777 456666654334789999999 7777777
Q ss_pred EeecCCCCceeEEEEccCCCeEEEEEec----------CcEEEEEcCCceeeeeecccccccCCCccceeccCCCccccc
Q 014755 216 YQAYESGLGVKSISWSPCGQFLAVGSYD----------QTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLD 285 (419)
Q Consensus 216 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d----------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (419)
+.... ....++++|+|++++++..+ +.|.++|..+++....+..+
T Consensus 168 i~~g~---~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~---------------------- 222 (328)
T 3dsm_A 168 LTIGI---QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFK---------------------- 222 (328)
T ss_dssp EECSS---CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECC----------------------
T ss_pred EEcCC---CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecC----------------------
Confidence 76533 46789999999877776554 78999999888776554311
Q ss_pred ceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeecc
Q 014755 286 MSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDIC 365 (419)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~ 365 (419)
.......++|+|++++|+++. +.|.+||..
T Consensus 223 ----------------------------------------------~g~~p~~la~~~d~~~lyv~~----~~v~~~d~~ 252 (328)
T 3dsm_A 223 ----------------------------------------------LGDWPSEVQLNGTRDTLYWIN----NDIWRMPVE 252 (328)
T ss_dssp ----------------------------------------------TTCCCEEEEECTTSCEEEEES----SSEEEEETT
T ss_pred ----------------------------------------------CCCCceeEEEecCCCEEEEEc----cEEEEEECC
Confidence 011357899999999888875 479999999
Q ss_pred CCCcee--ecc-cCCCeeEEEeCCC-CCeEEEE----eCCCcEEEeecCCCeEE
Q 014755 366 RQEPAA--ILV-QKDPIRAATWDPT-CTRLVLC----TGSSHLYMWTPSGAYCV 411 (419)
Q Consensus 366 ~~~~~~--~~~-~~~~v~~~~~s~~-~~~l~s~----~~dg~i~vw~~~~~~~~ 411 (419)
++++.. ... .......++++|+ +.+.++. ..++.|.+|+.. ++++
T Consensus 253 t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~ 305 (328)
T 3dsm_A 253 ADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLI 305 (328)
T ss_dssp CSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEE
T ss_pred CCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEE
Confidence 888642 222 2467899999994 5555555 568899999999 5443
No 190
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.82 E-value=2.2e-16 Score=137.76 Aligned_cols=292 Identities=8% Similarity=-0.063 Sum_probs=193.4
Q ss_pred EEecCCCeEEEEec-cCC---eEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEec---------CCCeEEEEEc
Q 014755 54 EWALDSEYILCGLY-KRL---MIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSD---------FQLRLTVWSL 120 (419)
Q Consensus 54 ~~s~~~~~l~~~~~-~~g---~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------~~~~i~iwd~ 120 (419)
...|+++++++... ..+ +|.++|..+++.+..+.....+ .++++|||++++++.. .++.|.+||.
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~ 104 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDP 104 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEEC
Confidence 44578888777653 222 8899999999988777655544 8999999999999862 2238999999
Q ss_pred CCCeEEE-eccC-------CCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEE-EeccccceeeeeECCCCCe
Q 014755 121 LNTACVH-VQSP-------KHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGV-FAVDTLDLADIEWSPDDSA 191 (419)
Q Consensus 121 ~~~~~~~-~~~~-------~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~ 191 (419)
.+.+.+. +... ......+.++|||++|+++.... .+.|.++| .+++.+.. +.... ++.+.|+++.
T Consensus 105 ~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~-~~~v~viD-~t~~~~~~~i~~~~----~~~~~~~~~~ 178 (373)
T 2mad_H 105 VTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAA-GPAVGLVV-QGGSSDDQLLSSPT----CYHIHPGAPS 178 (373)
T ss_pred CCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCC-CCeEEEEE-CCCCEEeEEcCCCc----eEEEEeCCCc
Confidence 9877665 3222 12346899999999999987421 26899999 99988777 54322 2445566654
Q ss_pred EEEEcCCCCceEEEEcCCCceEEEEee---cCCCCc-eeEEEEccCCCeEEEEEecCcEEEEEcCCcee--eeeeccccc
Q 014755 192 IVIWDSPLEYKVLIYSPDGRCLLKYQA---YESGLG-VKSISWSPCGQFLAVGSYDQTLRVLNHLTWKT--FAEFMHLST 265 (419)
Q Consensus 192 l~~~~~~~~~~i~~~d~~~~~~~~~~~---~~~~~~-v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~--~~~~~~~~~ 265 (419)
.++. ...++.+.++|.+++....... .....+ .....+.+++..++..+..+.+.+.|+.+... +..+.....
T Consensus 179 ~~~~-~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~ 257 (373)
T 2mad_H 179 TFYL-LCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSG 257 (373)
T ss_pred eEEE-EcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCC
Confidence 4332 3457888888885554422210 011111 23356677766655555778999999865432 122110000
Q ss_pred ccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCC
Q 014755 266 VRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDS 345 (419)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g 345 (419)
. .....| .......++++||+
T Consensus 258 ~---~~~~~~--------------------------------------------------------~p~g~~~~~~s~d~ 278 (373)
T 2mad_H 258 G---RKADTW--------------------------------------------------------RPGGWQQVAYLKSS 278 (373)
T ss_pred c---ccccce--------------------------------------------------------ecCceEeEEECCCC
Confidence 0 000000 11224457899999
Q ss_pred eEEEEecCC--------CCceEEEeeccCCCceeecccCCCeeEEEeCCCCC-eEEEEe-CCCcEEEeecCCCeEEec
Q 014755 346 QYICTRNDS--------MPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCT-RLVLCT-GSSHLYMWTPSGAYCVSN 413 (419)
Q Consensus 346 ~~l~~~~~d--------~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~-~dg~i~vw~~~~~~~~~~ 413 (419)
+.++.+..+ ..+.|.++|+.+++.+..+.......+++|+|||+ .++++. .++.|.+||+.+++.+..
T Consensus 279 ~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 279 DGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 887776431 12689999999999987776566799999999999 777776 589999999999888765
No 191
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.82 E-value=2e-17 Score=143.25 Aligned_cols=243 Identities=10% Similarity=0.022 Sum_probs=168.0
Q ss_pred ccCeEEcCCCCEEEEEe-CCeEEEEecCCCcEEE-EeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeee
Q 014755 10 TGPSCFSPNARYIAVAV-DYRLVVRDAHSFKVVQ-LFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKID 87 (419)
Q Consensus 10 ~~~~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~ 87 (419)
...++|+|++..++..+ ++.++.| .++... ...+...+.+++|+|+|++++++..+ +.|.+||.++++......
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~-~~i~~~d~~~~~~~~~~~ 83 (333)
T 2dg1_A 8 LPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFE-GNIFKINPETKEIKRPFV 83 (333)
T ss_dssp CCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTT-CEEEEECTTTCCEEEEEE
T ss_pred cceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCC-CEEEEEeCCCCcEEEEee
Confidence 34478899887777654 6778888 233333 34466778999999999976676655 799999998887654444
Q ss_pred cCCccEeEEEECCCCCEEEEEecC----CCeEEEEEcCCCeEEE-ec--cCCCCeeeEEEccCCCEEEEEeec---CCCC
Q 014755 88 EGLAGIAYARWSPDSRHILTTSDF----QLRLTVWSLLNTACVH-VQ--SPKHASKGVAFTQDGKFAAICTRR---DCKD 157 (419)
Q Consensus 88 ~~~~~v~~~~~~~~~~~l~~~~~~----~~~i~iwd~~~~~~~~-~~--~~~~~~~~~~~~~~~~~l~~~~~~---~~~g 157 (419)
.+...+.+++++|+|+.+++...+ + .|.+||.++++... +. .....+..++++|+|+.+++...+ ...+
T Consensus 84 ~~~~~~~~i~~~~dg~l~v~~~~~~~~~~-~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~ 162 (333)
T 2dg1_A 84 SHKANPAAIKIHKDGRLFVCYLGDFKSTG-GIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLG 162 (333)
T ss_dssp CSSSSEEEEEECTTSCEEEEECTTSSSCC-EEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCE
T ss_pred CCCCCcceEEECCCCcEEEEeCCCCCCCc-eEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCc
Confidence 566779999999999877776554 4 79999998877653 22 234567899999999877765421 0124
Q ss_pred eEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC--CCceEEEEe-----ecCCCCceeEEEE
Q 014755 158 YINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP--DGRCLLKYQ-----AYESGLGVKSISW 230 (419)
Q Consensus 158 ~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~--~~~~~~~~~-----~~~~~~~v~~~~~ 230 (419)
.|..+|..+++.... ......+..++|+|+++.+++.+ ..++.|++||. ++..+..+. .......+..+++
T Consensus 163 ~l~~~~~~~~~~~~~-~~~~~~~~~i~~~~dg~~l~v~~-~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~ 240 (333)
T 2dg1_A 163 GVYYVSPDFRTVTPI-IQNISVANGIALSTDEKVLWVTE-TTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCI 240 (333)
T ss_dssp EEEEECTTSCCEEEE-EEEESSEEEEEECTTSSEEEEEE-GGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEE
T ss_pred eEEEEeCCCCEEEEe-ecCCCcccceEECCCCCEEEEEe-CCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEE
Confidence 677777765554332 22334578899999999777643 33679999998 444433221 1111126788999
Q ss_pred ccCCCeEEEEEecCcEEEEEcCCceeeeee
Q 014755 231 SPCGQFLAVGSYDQTLRVLNHLTWKTFAEF 260 (419)
Q Consensus 231 s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 260 (419)
+++|+++++...++.|.+||. +++.+..+
T Consensus 241 d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~ 269 (333)
T 2dg1_A 241 DSDDNLYVAMYGQGRVLVFNK-RGYPIGQI 269 (333)
T ss_dssp BTTCCEEEEEETTTEEEEECT-TSCEEEEE
T ss_pred CCCCCEEEEEcCCCEEEEECC-CCCEEEEE
Confidence 999988777777789999997 45554444
No 192
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.81 E-value=3.6e-17 Score=156.83 Aligned_cols=234 Identities=10% Similarity=0.032 Sum_probs=154.7
Q ss_pred EEcCCCCEEEEEe-C-C----eEEEEecC---CCcEEEEee-------cCcceeEEEEecCCCeEEEEeccCC----eEE
Q 014755 14 CFSPNARYIAVAV-D-Y----RLVVRDAH---SFKVVQLFS-------CLDKISYIEWALDSEYILCGLYKRL----MIQ 73 (419)
Q Consensus 14 ~~s~d~~~la~~~-~-~----~i~i~~~~---~~~~~~~~~-------~~~~v~~~~~s~~~~~l~~~~~~~g----~i~ 73 (419)
..+|||++++... + + .+++.+.. +++...++. |...+..++|||||++||+++.+.| .|+
T Consensus 113 ~p~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~ 192 (741)
T 1yr2_A 113 LPQRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVK 192 (741)
T ss_dssp CCEEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEE
T ss_pred CCEEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEE
Confidence 3469999999886 2 2 24455554 455444432 2236889999999999998875534 599
Q ss_pred EEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCC-------------eEEEEEcCCCe---EEEeccC--CCCe
Q 014755 74 AWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQL-------------RLTVWSLLNTA---CVHVQSP--KHAS 135 (419)
Q Consensus 74 iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~-------------~i~iwd~~~~~---~~~~~~~--~~~~ 135 (419)
+||+.+++.+... .+...+..++|+|| +.|++++.+.. .|++|++.++. ....... ...+
T Consensus 193 v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~ 270 (741)
T 1yr2_A 193 FVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRG 270 (741)
T ss_dssp EEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCE
T ss_pred EEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEE
Confidence 9999999865431 12222357899999 99998876542 48999998754 2222222 2347
Q ss_pred eeEEEccCCCEEEEEeecC--CCCeEEEEeccCCe-E-EEEEeccccceeeeeECCCCCeEEEEcCC--CCceEEEEcCC
Q 014755 136 KGVAFTQDGKFAAICTRRD--CKDYINLLSCHTWE-I-MGVFAVDTLDLADIEWSPDDSAIVIWDSP--LEYKVLIYSPD 209 (419)
Q Consensus 136 ~~~~~~~~~~~l~~~~~~~--~~g~v~i~d~~~~~-~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--~~~~i~~~d~~ 209 (419)
..+.|+|||++|++.+.+. ....|++||+.++. . ...+..+........ +|+|+.+++.... .++.|++||+.
T Consensus 271 ~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~ 349 (741)
T 1yr2_A 271 HGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLS 349 (741)
T ss_dssp EEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECS
T ss_pred EEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCC
Confidence 8999999999999888653 23589999998873 2 445555444444443 4889888774322 25679999994
Q ss_pred C--ceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcC
Q 014755 210 G--RCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHL 252 (419)
Q Consensus 210 ~--~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~ 252 (419)
+ .....+..+.. ..+..++++ ++.++++...|+..+||.+.
T Consensus 350 ~~~~~~~~l~~~~~-~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 350 GSTPRFDTVVPESK-DNLESVGIA-GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp SSSCEEEEEECCCS-SEEEEEEEE-BTEEEEEEEETTEEEEEEEE
T ss_pred CCccccEEEecCCC-CeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 3 23344433322 256677887 55677888888877776543
No 193
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.81 E-value=2.8e-17 Score=157.51 Aligned_cols=283 Identities=12% Similarity=0.031 Sum_probs=182.8
Q ss_pred ecCCCeEEEEeccCC--eEEEEEcc-----CCcceeeee------cCCccEeEEEECCCCCEEEEEecCCC----eEEEE
Q 014755 56 ALDSEYILCGLYKRL--MIQAWSLT-----QPEWTCKID------EGLAGIAYARWSPDSRHILTTSDFQL----RLTVW 118 (419)
Q Consensus 56 s~~~~~l~~~~~~~g--~i~iw~~~-----~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~~~~----~i~iw 118 (419)
+|+|++++....+.+ .-.+|... .++....+. .+...+..++|||||++|++++.++| .|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 489999998876543 24555543 343332211 12236889999999999998865422 69999
Q ss_pred EcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCC-----------CCeEEEEeccCCeE--EEEEec--cccceeee
Q 014755 119 SLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDC-----------KDYINLLSCHTWEI--MGVFAV--DTLDLADI 183 (419)
Q Consensus 119 d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----------~g~v~i~d~~~~~~--~~~~~~--~~~~v~~~ 183 (419)
|+.+++.+...........++|+|| +.|+++..+.. ...|++|++.+++. ...+.. +...+..+
T Consensus 195 dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~ 273 (741)
T 1yr2_A 195 GVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGA 273 (741)
T ss_dssp ETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEE
T ss_pred ECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEE
Confidence 9999987663222222368899999 99999886532 23599999977652 222222 22357899
Q ss_pred eECCCCCeEEEEcCC---CCceEEEEcC-CCc-e-EEEEeecCCCCceeEEEEccCCCeEEEEEec----CcEEEEEcCC
Q 014755 184 EWSPDDSAIVIWDSP---LEYKVLIYSP-DGR-C-LLKYQAYESGLGVKSISWSPCGQFLAVGSYD----QTLRVLNHLT 253 (419)
Q Consensus 184 ~~~~~~~~l~~~~~~---~~~~i~~~d~-~~~-~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----~~i~v~d~~~ 253 (419)
.|+|||++|++.... ....|++||+ ++. . ...+..... .+... ++|+|+.|+..+.+ +.|.+||+.+
T Consensus 274 ~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~--~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~ 350 (741)
T 1yr2_A 274 SVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK--AQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSG 350 (741)
T ss_dssp EECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS--SCEEE-EEEETTEEEEEECTTCTTCEEEEEECSS
T ss_pred EECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC--ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 999999998874322 2458999999 441 2 455554433 34444 35899988888764 4599999876
Q ss_pred ce-eeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCC
Q 014755 254 WK-TFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNP 332 (419)
Q Consensus 254 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (419)
+. ....+. +.+
T Consensus 351 ~~~~~~~l~--------------------------------------------------------------------~~~ 362 (741)
T 1yr2_A 351 STPRFDTVV--------------------------------------------------------------------PES 362 (741)
T ss_dssp SSCEEEEEE--------------------------------------------------------------------CCC
T ss_pred CccccEEEe--------------------------------------------------------------------cCC
Confidence 42 212211 012
Q ss_pred CcceEEEEEccCCeEEEEecCCCCceEEEeecc-CCCceeecc--cCCCeeEEEeCCCCCeEEEE----eCCCcEEEeec
Q 014755 333 KQGIGLMSWSSDSQYICTRNDSMPTTLWIWDIC-RQEPAAILV--QKDPIRAATWDPTCTRLVLC----TGSSHLYMWTP 405 (419)
Q Consensus 333 ~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~-~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~----~~dg~i~vw~~ 405 (419)
...+..++++ ++.++++...+ +..+||.+. +++....+. +.+.+..+.++|+++.|+.. ...++|++||+
T Consensus 363 ~~~l~~~~~~-~~~lv~~~~~d--g~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 439 (741)
T 1yr2_A 363 KDNLESVGIA-GNRLFASYIHD--AKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDP 439 (741)
T ss_dssp SSEEEEEEEE-BTEEEEEEEET--TEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEET
T ss_pred CCeEEEEEEE-CCEEEEEEEEC--CEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 2235667777 66778888877 776666554 344444333 46778999999999866532 23578999999
Q ss_pred CCCeEEec
Q 014755 406 SGAYCVSN 413 (419)
Q Consensus 406 ~~~~~~~~ 413 (419)
.+++...+
T Consensus 440 ~tg~~~~l 447 (741)
T 1yr2_A 440 ATAKTTPW 447 (741)
T ss_dssp TTTEEEEC
T ss_pred CCCcEEEE
Confidence 98875544
No 194
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.81 E-value=2.2e-15 Score=128.24 Aligned_cols=279 Identities=10% Similarity=-0.028 Sum_probs=190.3
Q ss_pred cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeee-ecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCe
Q 014755 46 CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKI-DEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTA 124 (419)
Q Consensus 46 ~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~ 124 (419)
+...+.++++.++|+.+++...+ +.|.+||.. ++..... ......+.++++.++|..+++...++ .|..||.. ++
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~-~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~-~i~~~~~~-g~ 88 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKA-NMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAAN-KIGRITKK-GI 88 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTT-TEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTT-EEEEECTT-SC
T ss_pred cCCCccceEECCCCCEEEEecCC-CcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCC-eEEEECCC-Cc
Confidence 34678999999999877765534 789999988 5543222 22446789999999998766655455 89999987 44
Q ss_pred EEEec--cCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEE-EeccccceeeeeECCCCCeEEEEcCCCCc
Q 014755 125 CVHVQ--SPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGV-FAVDTLDLADIEWSPDDSAIVIWDSPLEY 201 (419)
Q Consensus 125 ~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~~~~ 201 (419)
...+. .....+..+++.++++.+++...+ +.|..||. +++.... .......+..+++.++|+.++. ....+
T Consensus 89 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~---~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~--~~~~~ 162 (299)
T 2z2n_A 89 IKEYTLPNPDSAPYGITEGPNGDIWFTEMNG---NRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFT--ENQNN 162 (299)
T ss_dssp EEEEECSSTTCCEEEEEECTTSCEEEEETTT---TEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEE--ETTTT
T ss_pred EEEEeCCCcCCCceeeEECCCCCEEEEecCC---ceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEE--eCCCC
Confidence 33322 244567899999998776665443 68999998 5544332 2223456889999999976665 34468
Q ss_pred eEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCc
Q 014755 202 KVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEP 281 (419)
Q Consensus 202 ~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (419)
.|..||.+++... +........+.+++++++|++.++...++.|.+||. +++... +..
T Consensus 163 ~i~~~~~~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~------------------- 220 (299)
T 2z2n_A 163 AIGRITESGDITE-FKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITE-FKI------------------- 220 (299)
T ss_dssp EEEEECTTCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EEC-------------------
T ss_pred EEEEEcCCCcEEE-eeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEE-EEC-------------------
Confidence 8999999655443 322222236889999999987666656788999997 554321 110
Q ss_pred ccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEE
Q 014755 282 LQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWI 361 (419)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~i 361 (419)
..+...+..++++++|+++++...+ +.|..
T Consensus 221 ------------------------------------------------~~~~~~~~~i~~~~~g~l~v~~~~~--~~i~~ 250 (299)
T 2z2n_A 221 ------------------------------------------------PTPNARPHAITAGAGIDLWFTEWGA--NKIGR 250 (299)
T ss_dssp ------------------------------------------------SSTTCCEEEEEECSTTCEEEEETTT--TEEEE
T ss_pred ------------------------------------------------CCCCCCceeEEECCCCCEEEeccCC--ceEEE
Confidence 0122347889999999977776566 89999
Q ss_pred eeccCCCceeec--ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCe
Q 014755 362 WDICRQEPAAIL--VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAY 409 (419)
Q Consensus 362 wd~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~ 409 (419)
||. +++..... .+...+.++++ ++++++++.+ .+.+..+++++++
T Consensus 251 ~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 251 LTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp EET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC---
T ss_pred ECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCccc
Confidence 998 45544332 34567999999 8888766554 5778888887654
No 195
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.80 E-value=1e-16 Score=140.32 Aligned_cols=276 Identities=12% Similarity=0.022 Sum_probs=187.7
Q ss_pred cCCCCEEEEEeC------CeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEec---------cCCeEEEEEccCC
Q 014755 16 SPNARYIAVAVD------YRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLY---------KRLMIQAWSLTQP 80 (419)
Q Consensus 16 s~d~~~la~~~~------~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---------~~g~i~iw~~~~~ 80 (419)
.|+++.+++... +.|.++|..+++.+..+.-...- .++++|||++|+++.. .++.|.++|..++
T Consensus 81 ~~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 81 APDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 357888887763 68999999999999887633333 8999999999988863 2368999999999
Q ss_pred cceeeeecC-------CccEeEEEECCCCCEEEEEecC-CCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCC-CEEEEE
Q 014755 81 EWTCKIDEG-------LAGIAYARWSPDSRHILTTSDF-QLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDG-KFAAIC 150 (419)
Q Consensus 81 ~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~~-~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~-~~l~~~ 150 (419)
+.+..+.-. ......+.|+|||++++++... .+.|.+.|+.+++.+. +.... +....|++ +.+++.
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g----~~~~~p~g~~~~v~~ 235 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD----CYHIFPASPTVFYMN 235 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS----EEEEEEEETTEEEEE
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC----ceeeccCCCcEEEEE
Confidence 888776432 1235678999999999998753 4489999999998876 43221 12334443 333334
Q ss_pred eecCCCCeEEEEeccCCeEEEE----Eeccccc-eeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEee---cC--
Q 014755 151 TRRDCKDYINLLSCHTWEIMGV----FAVDTLD-LADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQA---YE-- 220 (419)
Q Consensus 151 ~~~~~~g~v~i~d~~~~~~~~~----~~~~~~~-v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~---~~-- 220 (419)
+.+ |.+.+.+..+++.... +.....+ ...+.+.+++..+++. ...+.+++.|..+........ ..
T Consensus 236 ~~d---G~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~--s~~g~V~ViD~~~~~~~v~~~~~~~~~~ 310 (426)
T 3c75_H 236 CRD---GSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWP--TYTGKIFQADLTAEGATFRAPIEALTEA 310 (426)
T ss_dssp ETT---SSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEE--BTTSEEEEEEECSSCEEECCCEESSCTT
T ss_pred cCC---CCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEE--eCCCcEEEEeccCCceEEeeeeeecccc
Confidence 433 5666666654444321 1111112 1245678998887774 346789999984433222111 00
Q ss_pred ------CCCceeEEEEccCCCeEEEEEe----------cCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccc
Q 014755 221 ------SGLGVKSISWSPCGQFLAVGSY----------DQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQL 284 (419)
Q Consensus 221 ------~~~~v~~~~~s~~~~~l~~~~~----------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (419)
.......++++|+++.+++... ++.|.++|..+++.+..+.-..
T Consensus 311 ~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-------------------- 370 (426)
T 3c75_H 311 ERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-------------------- 370 (426)
T ss_dssp TGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE--------------------
T ss_pred ccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC--------------------
Confidence 0001234789999987777643 3579999999999888774111
Q ss_pred cceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCe-EEEEecC-CCCceEEEe
Q 014755 285 DMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQ-YICTRND-SMPTTLWIW 362 (419)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~-d~~~~i~iw 362 (419)
....++|+|||+ ++++... + +.|.++
T Consensus 371 --------------------------------------------------~P~gia~spDg~~~lyv~n~~s--~~VsVI 398 (426)
T 3c75_H 371 --------------------------------------------------EIDSINVSQDAEPLLYALSAGT--QTLHIY 398 (426)
T ss_dssp --------------------------------------------------EECEEEECCSSSCEEEEEETTT--TEEEEE
T ss_pred --------------------------------------------------CcCeEEEccCCCEEEEEEcCCC--CeEEEE
Confidence 135789999999 8888774 6 999999
Q ss_pred eccCCCceeec
Q 014755 363 DICRQEPAAIL 373 (419)
Q Consensus 363 d~~~~~~~~~~ 373 (419)
|+.+++++..+
T Consensus 399 D~~t~kvv~tI 409 (426)
T 3c75_H 399 DAATGEELRSV 409 (426)
T ss_dssp ETTTCCEEEEE
T ss_pred ECCCCCEEEEe
Confidence 99999988775
No 196
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.80 E-value=2.4e-16 Score=133.99 Aligned_cols=207 Identities=10% Similarity=0.023 Sum_probs=144.6
Q ss_pred EEEeecCcceeEEEEecCCC-eEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEE
Q 014755 41 VQLFSCLDKISYIEWALDSE-YILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWS 119 (419)
Q Consensus 41 ~~~~~~~~~v~~~~~s~~~~-~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd 119 (419)
..+..+.....+++|+|+|+ +++++..+ +.|..|+..++ ...+..+...+.+++++|+|+.+++...++ .|.+||
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~-~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~-~i~~~d 96 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQ-NRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLR-RLERQR 96 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGG-TEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTT-EEEEEC
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCC-CEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCC-eEEEEc
Confidence 33444566788999999999 55555544 79999999877 556666777799999999999766655555 899999
Q ss_pred cCCCeEEEecc-C----CCCeeeEEEccCCCEEEEEee--------------cCCCCeEEEEeccCCeEEEEEeccccce
Q 014755 120 LLNTACVHVQS-P----KHASKGVAFTQDGKFAAICTR--------------RDCKDYINLLSCHTWEIMGVFAVDTLDL 180 (419)
Q Consensus 120 ~~~~~~~~~~~-~----~~~~~~~~~~~~~~~l~~~~~--------------~~~~g~v~i~d~~~~~~~~~~~~~~~~v 180 (419)
..+++...+.. . ...+..++++|+|+++++... +...+.|..++.. ++. ..+..+....
T Consensus 97 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~~~~~ 174 (296)
T 3e5z_A 97 EPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRDRVKP 174 (296)
T ss_dssp STTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECCCSSE
T ss_pred CCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecCCCCC
Confidence 98877655321 1 124578999999988776321 0012467777766 443 3344455667
Q ss_pred eeeeECCCCCeEEEEcCCCCceEEEEcC--CCce---EEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCce
Q 014755 181 ADIEWSPDDSAIVIWDSPLEYKVLIYSP--DGRC---LLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWK 255 (419)
Q Consensus 181 ~~~~~~~~~~~l~~~~~~~~~~i~~~d~--~~~~---~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~ 255 (419)
..++|+|+++.+ +.+ ..++.|++|++ +++. ...+ ......+.+++++++|+++++. ++.|.+||.. ++
T Consensus 175 ~gi~~s~dg~~l-v~~-~~~~~i~~~~~~~~g~~~~~~~~~--~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~ 247 (296)
T 3e5z_A 175 NGLAFLPSGNLL-VSD-TGDNATHRYCLNARGETEYQGVHF--TVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GD 247 (296)
T ss_dssp EEEEECTTSCEE-EEE-TTTTEEEEEEECSSSCEEEEEEEE--CCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SC
T ss_pred ccEEECCCCCEE-EEe-CCCCeEEEEEECCCCcCcCCCeEe--eCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CC
Confidence 899999999998 543 45789999998 4544 2333 2223357889999999866655 7889999976 55
Q ss_pred eeeee
Q 014755 256 TFAEF 260 (419)
Q Consensus 256 ~~~~~ 260 (419)
.+..+
T Consensus 248 ~~~~~ 252 (296)
T 3e5z_A 248 ELGRV 252 (296)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55544
No 197
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.80 E-value=1.2e-16 Score=135.97 Aligned_cols=231 Identities=12% Similarity=0.048 Sum_probs=165.2
Q ss_pred CeEEcCCCC-EEEEEe-CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecC
Q 014755 12 PSCFSPNAR-YIAVAV-DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEG 89 (419)
Q Consensus 12 ~~~~s~d~~-~la~~~-~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~ 89 (419)
.++|+|+|+ +++++. ++.|..|+..++ ......+...+.+++++|+|+++++...+ +.|.+||..+++........
T Consensus 32 g~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg~l~v~~~~~-~~i~~~d~~~g~~~~~~~~~ 109 (296)
T 3e5z_A 32 GPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQGHLIACSHGL-RRLERQREPGGEWESIADSF 109 (296)
T ss_dssp EEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESSCSSEEEEEECTTCCEEEEETTT-TEEEEECSTTCCEEEEECEE
T ss_pred CCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECCCCCcceeeECCCCcEEEEecCC-CeEEEEcCCCCcEEEEeecc
Confidence 389999999 555555 788999999988 44444466789999999999977766544 68999999888754333221
Q ss_pred ----CccEeEEEECCCCCEEEEEec----------------CCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEE
Q 014755 90 ----LAGIAYARWSPDSRHILTTSD----------------FQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAI 149 (419)
Q Consensus 90 ----~~~v~~~~~~~~~~~l~~~~~----------------~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 149 (419)
...+..++++|+|+.+++.+. ..+.|..++.. ++...+.........++|+|+++.+++
T Consensus 110 ~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~lv~ 188 (296)
T 3e5z_A 110 EGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLLVS 188 (296)
T ss_dssp TTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEEEE
T ss_pred CCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEEEE
Confidence 124678999999998776321 12256666665 555555555566789999999998844
Q ss_pred EeecCCCCeEEEEecc-CCeE---EEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCce
Q 014755 150 CTRRDCKDYINLLSCH-TWEI---MGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGV 225 (419)
Q Consensus 150 ~~~~~~~g~v~i~d~~-~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v 225 (419)
...+ +.|++|++. +++. ...+..+...+..++++++|+.++.. ++.|.+|+.+++.+..+..+.. +
T Consensus 189 ~~~~---~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~----~~~v~~~~~~g~~~~~~~~~~~---~ 258 (296)
T 3e5z_A 189 DTGD---NATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA----GDGVHVLTPDGDELGRVLTPQT---T 258 (296)
T ss_dssp ETTT---TEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE----TTEEEEECTTSCEEEEEECSSC---C
T ss_pred eCCC---CeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc----CCeEEEECCCCCEEEEEECCCC---c
Confidence 4333 799999987 4544 23333344567789999999866552 6889999999888887775543 8
Q ss_pred eEEEE-ccCCCeEEEEEecCcEEEEEcCCcee
Q 014755 226 KSISW-SPCGQFLAVGSYDQTLRVLNHLTWKT 256 (419)
Q Consensus 226 ~~~~~-s~~~~~l~~~~~d~~i~v~d~~~~~~ 256 (419)
.+++| +|+++.|++++.+ .+..++..+.+.
T Consensus 259 ~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~ 289 (296)
T 3e5z_A 259 SNLCFGGPEGRTLYMTVST-EFWSIETNVRGL 289 (296)
T ss_dssp CEEEEESTTSCEEEEEETT-EEEEEECSCCBC
T ss_pred eeEEEECCCCCEEEEEcCC-eEEEEEcccccc
Confidence 89999 5899988888865 455566665543
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.79 E-value=5.2e-15 Score=125.93 Aligned_cols=228 Identities=8% Similarity=-0.041 Sum_probs=161.1
Q ss_pred cCeEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEe--ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeee
Q 014755 11 GPSCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLF--SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKID 87 (419)
Q Consensus 11 ~~~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~ 87 (419)
..++++|+|++.++.. ++.|.+||.. ++..... .+...+.+++++++|..+++...+ +.|..|+.. ++. ..+.
T Consensus 18 ~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~-~~i~~~~~~-g~~-~~~~ 93 (299)
T 2z2n_A 18 YGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAA-NKIGRITKK-GII-KEYT 93 (299)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTT-TEEEEECTT-SCE-EEEE
T ss_pred cceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCC-CeEEEECCC-CcE-EEEe
Confidence 3488999999777765 6789999988 6654433 245679999999999877776544 789999986 433 2222
Q ss_pred --cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEe--ccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEe
Q 014755 88 --EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHV--QSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLS 163 (419)
Q Consensus 88 --~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d 163 (419)
.....+..+++.+++..+++...++ .|..||. +++...+ ......+..++++++++..++.... +.|..||
T Consensus 94 ~~~~~~~~~~i~~~~~g~l~v~~~~~~-~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~---~~i~~~~ 168 (299)
T 2z2n_A 94 LPNPDSAPYGITEGPNGDIWFTEMNGN-RIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQN---NAIGRIT 168 (299)
T ss_dssp CSSTTCCEEEEEECTTSCEEEEETTTT-EEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTT---TEEEEEC
T ss_pred CCCcCCCceeeEECCCCCEEEEecCCc-eEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCC---CEEEEEc
Confidence 2345688999999998666655555 8999998 5555442 2334567899999999766655433 6899999
Q ss_pred ccCCeEEEE-EeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEe
Q 014755 164 CHTWEIMGV-FAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSY 242 (419)
Q Consensus 164 ~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 242 (419)
. +++.... .......+..+++.++|+.++. ...++.|..||.+++.. .+........+.+++++++|+..++...
T Consensus 169 ~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~--~~~~~~i~~~~~~g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~ 244 (299)
T 2z2n_A 169 E-SGDITEFKIPTPASGPVGITKGNDDALWFV--EIIGNKIGRITTSGEIT-EFKIPTPNARPHAITAGAGIDLWFTEWG 244 (299)
T ss_dssp T-TCCEEEEECSSTTCCEEEEEECTTSSEEEE--ETTTTEEEEECTTCCEE-EEECSSTTCCEEEEEECSTTCEEEEETT
T ss_pred C-CCcEEEeeCCCCCCcceeEEECCCCCEEEE--ccCCceEEEECCCCcEE-EEECCCCCCCceeEEECCCCCEEEeccC
Confidence 8 6655432 2223456789999999986554 33467899999965543 3433323336899999999986666556
Q ss_pred cCcEEEEEc
Q 014755 243 DQTLRVLNH 251 (419)
Q Consensus 243 d~~i~v~d~ 251 (419)
++.|.+||.
T Consensus 245 ~~~i~~~d~ 253 (299)
T 2z2n_A 245 ANKIGRLTS 253 (299)
T ss_dssp TTEEEEEET
T ss_pred CceEEEECC
Confidence 788999997
No 199
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.78 E-value=3e-16 Score=134.81 Aligned_cols=289 Identities=11% Similarity=0.031 Sum_probs=188.8
Q ss_pred EEEecCCCeEEEEecc----CCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEec---------CCCeEEEEE
Q 014755 53 IEWALDSEYILCGLYK----RLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSD---------FQLRLTVWS 119 (419)
Q Consensus 53 ~~~s~~~~~l~~~~~~----~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------~~~~i~iwd 119 (419)
....|+++.+++.... ++.|.++|..+++.+.++.....+ . ++++|||++++++.. ..+.|.+||
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 4557899999988653 469999999999998888766665 4 999999999988762 223899999
Q ss_pred cCCCeEEE-eccCC-------CCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCC-C
Q 014755 120 LLNTACVH-VQSPK-------HASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDD-S 190 (419)
Q Consensus 120 ~~~~~~~~-~~~~~-------~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~-~ 190 (419)
..+.+... +.... .....++++|||++++++.... .+.|.++|+.+++.+..+..... ...+ |.+ +
T Consensus 116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~-~~~VsVID~~t~~vv~tI~v~g~---~~~~-P~g~~ 190 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP-APAVGVVDLEGKAFKRMLDVPDC---YHIF-PTAPD 190 (386)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSS-SCEEEEEETTTTEEEEEEECCSE---EEEE-EEETT
T ss_pred CCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCC-CCeEEEEECCCCcEEEEEECCCc---ceee-cCCCc
Confidence 99988777 43221 2457899999999999886421 26899999999999988864321 1112 222 2
Q ss_pred eEEEEcCCCCceEEEEcC-C-CceEEEEeecC--CCCce-eEEEEc-cCCCeEEEEEecCcEEEEEcCCce--eeeeec-
Q 014755 191 AIVIWDSPLEYKVLIYSP-D-GRCLLKYQAYE--SGLGV-KSISWS-PCGQFLAVGSYDQTLRVLNHLTWK--TFAEFM- 261 (419)
Q Consensus 191 ~l~~~~~~~~~~i~~~d~-~-~~~~~~~~~~~--~~~~v-~~~~~s-~~~~~l~~~~~d~~i~v~d~~~~~--~~~~~~- 261 (419)
.++. .+.||++.+.++ + ++......... ....+ ....|. ++|++++ .+.+|.|++.|+.+.. .+..+.
T Consensus 191 ~~~~--~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~ 267 (386)
T 3sjl_D 191 TFFM--HCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEA 267 (386)
T ss_dssp EEEE--EETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEES
T ss_pred eeEE--ECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceec
Confidence 2222 233556666665 2 44322111111 11122 224664 6775544 5668999999987654 222221
Q ss_pred ccc-cccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEE
Q 014755 262 HLS-TVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMS 340 (419)
Q Consensus 262 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 340 (419)
... .+. .-|. ......++
T Consensus 268 ~~~~~~~-----~g~~--------------------------------------------------------p~g~q~~a 286 (386)
T 3sjl_D 268 LTEAERA-----DGWR--------------------------------------------------------PGGWQQVA 286 (386)
T ss_dssp SCHHHHH-----TTEE--------------------------------------------------------ECSSSCEE
T ss_pred ccccccc-----cccc--------------------------------------------------------CCCcceee
Confidence 000 000 0000 11123467
Q ss_pred EccCCeEEEEecC--------CCCceEEEeeccCCCceeecccCCCeeEEEeCCCCC-eEEEE-eCCCcEEEeecCCCeE
Q 014755 341 WSSDSQYICTRND--------SMPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCT-RLVLC-TGSSHLYMWTPSGAYC 410 (419)
Q Consensus 341 ~s~~g~~l~~~~~--------d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~-~~dg~i~vw~~~~~~~ 410 (419)
++|+++.++.... +..+.|.++|+.+++.+..+.-...++++++++|++ +|+++ ..++.|.++|..+++.
T Consensus 287 ~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~ 366 (386)
T 3sjl_D 287 YHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEE 366 (386)
T ss_dssp EETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred ECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcE
Confidence 7899888777642 112679999999999998876556899999999997 66654 4589999999998776
Q ss_pred Ee
Q 014755 411 VS 412 (419)
Q Consensus 411 ~~ 412 (419)
++
T Consensus 367 ~~ 368 (386)
T 3sjl_D 367 LR 368 (386)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 200
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.77 E-value=4e-16 Score=136.60 Aligned_cols=287 Identities=10% Similarity=0.020 Sum_probs=190.2
Q ss_pred cCCCeEEEEeccC----CeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEec---------CCCeEEEEEcCCC
Q 014755 57 LDSEYILCGLYKR----LMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSD---------FQLRLTVWSLLNT 123 (419)
Q Consensus 57 ~~~~~l~~~~~~~----g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------~~~~i~iwd~~~~ 123 (419)
|+++.+++..... +.|.++|..+++.+.++.....+ .++++||+++++++.. .++.|.++|..++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 5778787776543 69999999999999888766666 8999999999988863 2338999999998
Q ss_pred eEEE-eccC-------CCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEE
Q 014755 124 ACVH-VQSP-------KHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIW 195 (419)
Q Consensus 124 ~~~~-~~~~-------~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 195 (419)
+.+. +... ......+.++|||++++++.... .+.|.++|+.+++.+..+..... ....|+++..++.
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~-~~~VsVID~~t~kvv~~I~v~g~----~~~~p~g~~~~v~ 234 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSP-APAVGVVDLEGKTFDRMLDVPDC----YHIFPASPTVFYM 234 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSS-SCEEEEEETTTTEEEEEEECCSE----EEEEEEETTEEEE
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCC-CCeEEEEECCCCeEEEEEEcCCc----eeeccCCCcEEEE
Confidence 8776 3322 23457899999999999987421 26899999999999888765321 1222322221111
Q ss_pred cCCCCceEEEEcC-CCceEEEE----eecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceee--eeeccc--ccc
Q 014755 196 DSPLEYKVLIYSP-DGRCLLKY----QAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTF--AEFMHL--STV 266 (419)
Q Consensus 196 ~~~~~~~i~~~d~-~~~~~~~~----~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~--~~~~~~--~~~ 266 (419)
.+.++++.+.+. +++..... ..... .....+.+++++..++..+..+.+.+.|..+.... ..+... ..+
T Consensus 235 -~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~-p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i 312 (426)
T 3c75_H 235 -NCRDGSLARVDFADGETKVTNTEVFHTEDE-LLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAER 312 (426)
T ss_dssp -EETTSSEEEEECCTTCCEEEECCCCSCTTS-CBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTG
T ss_pred -EcCCCCEEEEECCCCcEEEEeeeeeccCCC-ceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccccc
Confidence 122444444444 33333211 11111 01224578999988888888899999998654422 111100 000
Q ss_pred cCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCe
Q 014755 267 RGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQ 346 (419)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 346 (419)
...+. ......++++|+++
T Consensus 313 -----~~g~~--------------------------------------------------------p~g~~~va~s~dg~ 331 (426)
T 3c75_H 313 -----ADDWR--------------------------------------------------------PGGWQQTAYHRQSD 331 (426)
T ss_dssp -----GGTEE--------------------------------------------------------ECSSSCEEEEGGGT
T ss_pred -----ccccc--------------------------------------------------------cCCceeeEEcCCCC
Confidence 00000 00112368999988
Q ss_pred EEEEecCC--------CCceEEEeeccCCCceeecccCCCeeEEEeCCCCC-eEEEEe-CCCcEEEeecCCCeEEec
Q 014755 347 YICTRNDS--------MPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCT-RLVLCT-GSSHLYMWTPSGAYCVSN 413 (419)
Q Consensus 347 ~l~~~~~d--------~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~-~dg~i~vw~~~~~~~~~~ 413 (419)
.+++...+ ..+.|.++|+.+.+.+..+.-....+.++|+|||+ +++++. .++.|.++|+.+++.++.
T Consensus 332 rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~t 408 (426)
T 3c75_H 332 RIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRS 408 (426)
T ss_dssp EEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred EEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEE
Confidence 77665321 11689999999999988876455699999999999 888887 589999999999887754
No 201
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.77 E-value=4.2e-16 Score=130.68 Aligned_cols=236 Identities=9% Similarity=-0.055 Sum_probs=160.4
Q ss_pred CeEEcCCCCEEEEE-e-CCeEEEEecCCCcEEEEe-ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeec
Q 014755 12 PSCFSPNARYIAVA-V-DYRLVVRDAHSFKVVQLF-SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDE 88 (419)
Q Consensus 12 ~~~~s~d~~~la~~-~-~~~i~i~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~ 88 (419)
.++++|+|++++++ . ++.|.+|+..+....... .+...+.+++++++|+++++.. + +.|.+||..+.........
T Consensus 28 ~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~-~~i~~~d~~~~~~~~~~~~ 105 (270)
T 1rwi_B 28 GVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-N-NRVVTLAAGSNNQTVLPFD 105 (270)
T ss_dssp EEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-T-TEEEEECTTCSCCEECCCC
T ss_pred ceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-C-CEEEEEeCCCceEeeeecC
Confidence 48899999966624 3 678999998765543321 2345788999999998555554 4 7999999876544322222
Q ss_pred CCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEe-ccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCC
Q 014755 89 GLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHV-QSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTW 167 (419)
Q Consensus 89 ~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~ 167 (419)
....+..+++.++|+.+++...++ .|.+|+..+...... ......+.+++++++++.+++...+ +.|.+||....
T Consensus 106 ~~~~p~~i~~~~~g~l~v~~~~~~-~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~---~~i~~~~~~~~ 181 (270)
T 1rwi_B 106 GLNYPEGLAVDTQGAVYVADRGNN-RVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDN---NRVVKLEAESN 181 (270)
T ss_dssp SCSSEEEEEECTTCCEEEEEGGGT-EEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGG---TEEEEECTTTC
T ss_pred CcCCCcceEECCCCCEEEEECCCC-EEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCC---CEEEEEecCCC
Confidence 335689999999998665555555 899997666544332 2223456899999999855554433 68999999876
Q ss_pred eEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEE
Q 014755 168 EIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLR 247 (419)
Q Consensus 168 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~ 247 (419)
........+...+..+++.++|..++. ...++.|.+|+..+........ .+...+.+++++++|+++++...++.|+
T Consensus 182 ~~~~~~~~~~~~p~~i~~d~~g~l~v~--~~~~~~v~~~~~~~~~~~~~~~-~~~~~p~~i~~~~~g~l~v~~~~~~~v~ 258 (270)
T 1rwi_B 182 NQVVLPFTDITAPWGIAVDEAGTVYVT--EHNTNQVVKLLAGSTTSTVLPF-TGLNTPLAVAVDSDRTVYVADRGNDRVV 258 (270)
T ss_dssp CEEECCCSSCCSEEEEEECTTCCEEEE--ETTTSCEEEECTTCSCCEECCC-CSCSCEEEEEECTTCCEEEEEGGGTEEE
T ss_pred ceEeecccCCCCceEEEECCCCCEEEE--ECCCCcEEEEcCCCCcceeecc-CCCCCceeEEECCCCCEEEEECCCCEEE
Confidence 554433333356889999999965554 3446889999996654443322 1223689999999999888888899999
Q ss_pred EEEcCCcee
Q 014755 248 VLNHLTWKT 256 (419)
Q Consensus 248 v~d~~~~~~ 256 (419)
++++...+.
T Consensus 259 ~~~~~~~~~ 267 (270)
T 1rwi_B 259 KLTSLEHHH 267 (270)
T ss_dssp EECCCGGGS
T ss_pred EEcCCCccc
Confidence 999876543
No 202
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.77 E-value=2.6e-15 Score=125.45 Aligned_cols=232 Identities=6% Similarity=0.007 Sum_probs=174.6
Q ss_pred CCCEEEEEe-CCeEEEEecCCCcEEEEeecC--cceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCC-ccE
Q 014755 18 NARYIAVAV-DYRLVVRDAHSFKVVQLFSCL--DKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGL-AGI 93 (419)
Q Consensus 18 d~~~la~~~-~~~i~i~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~-~~v 93 (419)
.+++|++++ ++.|.+||.++++.+..+... ..+.++.++|+|+++++ .+ +.|..||. +++.+.++..+. ..+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~-~~V~~~d~-~G~~~W~~~~~~~~~~ 79 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS--YS-KGAKMITR-DGRELWNIAAPAGCEM 79 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE--CB-SEEEEECT-TSCEEEEEECCTTCEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe--CC-CCEEEECC-CCCEEEEEcCCCCccc
Confidence 456778776 889999999999999877643 36899999999998883 34 68999999 888888887653 478
Q ss_pred eEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCC------CCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC
Q 014755 94 AYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPK------HASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT 166 (419)
Q Consensus 94 ~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~ 166 (419)
.++.+.++|+.+++.+.+.+.+..+|. +|+.+. +.... .....+++.++|+++++...+ +.|..||.+
T Consensus 80 ~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~---~~v~~~d~~- 154 (276)
T 3no2_A 80 QTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFAT---SEVREIAPN- 154 (276)
T ss_dssp EEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTT---TEEEEECTT-
T ss_pred cccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCC---CEEEEECCC-
Confidence 899999999999988763338888886 454443 32111 134567889999999887654 899999998
Q ss_pred CeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCC----CCceeEEEEccCCCeEEEEE
Q 014755 167 WEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYES----GLGVKSISWSPCGQFLAVGS 241 (419)
Q Consensus 167 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~----~~~v~~~~~s~~~~~l~~~~ 241 (419)
++.+..+... ..+..+...++|+.+++ ...++.|..+|. +|+.+..+..... ...+..++..++|+.+++..
T Consensus 155 G~~~w~~~~~-~~~~~~~~~~~g~~~v~--~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 155 GQLLNSVKLS-GTPFSSAFLDNGDCLVA--CGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp SCEEEEEECS-SCCCEEEECTTSCEEEE--CBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred CCEEEEEECC-CCccceeEcCCCCEEEE--eCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 9988888764 45667788899998887 555678999999 5999988864321 12478899999998887764
Q ss_pred ec--------CcEEEEEc-CCceeeeeec
Q 014755 242 YD--------QTLRVLNH-LTWKTFAEFM 261 (419)
Q Consensus 242 ~d--------~~i~v~d~-~~~~~~~~~~ 261 (419)
.. +..+++++ .+++.+-++.
T Consensus 232 ~g~~~~~~~~~~~~~~~~~~~g~~~W~~~ 260 (276)
T 3no2_A 232 QGHDREAGKGKHPQLVEIDSEGKVVWQLN 260 (276)
T ss_dssp CTTCTTGGGSCCCSEEEECTTSBEEEEEC
T ss_pred cCccccccccCCceEEEECCCCCEEEEec
Confidence 21 23456666 5677777765
No 203
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.76 E-value=1.1e-14 Score=123.99 Aligned_cols=276 Identities=11% Similarity=-0.022 Sum_probs=188.1
Q ss_pred cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceee-eecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCe
Q 014755 46 CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCK-IDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTA 124 (419)
Q Consensus 46 ~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~ 124 (419)
....+.++++.++|+..++...+ +.|.+||.. ++.... +......+..+++.+++...++....+ .|..+|.. ++
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~-~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~-~v~~~d~~-g~ 93 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKA-NKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGAN-KIGKLSKK-GG 93 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTT-TEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTT-EEEEECTT-SC
T ss_pred CCCCcceeeECCCCCEEEEcCCC-CeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCC-eEEEECCC-CC
Confidence 34578999999999877766544 799999987 554332 222335689999999998666554445 89999988 55
Q ss_pred EEEe--ccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEE-EeccccceeeeeECCCCCeEEEEcCCCCc
Q 014755 125 CVHV--QSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGV-FAVDTLDLADIEWSPDDSAIVIWDSPLEY 201 (419)
Q Consensus 125 ~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~~~~ 201 (419)
...+ ......+.++++.++++.+++...+ +.|..+|.. ++.... +......+..+++.++++.++. ...++
T Consensus 94 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~---~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~--~~~~~ 167 (300)
T 2qc5_A 94 FTEYPLPQPDSGPYGITEGLNGDIWFTQLNG---DRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFT--ENQNN 167 (300)
T ss_dssp EEEEECSSTTCCEEEEEECSTTCEEEEETTT---TEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEE--ETTTT
T ss_pred eEEecCCCCCCCCccceECCCCCEEEEccCC---CeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEE--ecCCC
Confidence 5443 2234567899999998876665433 689999987 555432 2223456889999999985544 33467
Q ss_pred eEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCc
Q 014755 202 KVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEP 281 (419)
Q Consensus 202 ~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (419)
.|..++.+++... +........+.+++++++|++.++....+.|.+||. +++......
T Consensus 168 ~i~~~~~~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~-------------------- 225 (300)
T 2qc5_A 168 SIGRITNTGKLEE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDI-------------------- 225 (300)
T ss_dssp EEEEECTTCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEEC--------------------
T ss_pred eEEEECCCCcEEE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEEC--------------------
Confidence 8999999666543 333222336889999999977666656678999987 433222100
Q ss_pred ccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEE
Q 014755 282 LQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWI 361 (419)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~i 361 (419)
+.+...+.+++++++|++.++...+ +.|..
T Consensus 226 ------------------------------------------------~~~~~~~~~i~~d~~g~l~v~~~~~--~~i~~ 255 (300)
T 2qc5_A 226 ------------------------------------------------PTPNARPHAITAGKNSEIWFTEWGA--NQIGR 255 (300)
T ss_dssp ------------------------------------------------SSTTCCEEEEEECSTTCEEEEETTT--TEEEE
T ss_pred ------------------------------------------------CCCCCCceEEEECCCCCEEEeccCC--CeEEE
Confidence 0122346789999999977777666 89999
Q ss_pred eeccCCCceee-cc-cCCCeeEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 362 WDICRQEPAAI-LV-QKDPIRAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 362 wd~~~~~~~~~-~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
||. +++.... .. ....+.++++.++|++.++.. . .|..++++
T Consensus 256 ~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 256 ITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp ECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred ECC-CCcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence 998 4554433 22 456789999999998666554 4 67776653
No 204
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.76 E-value=1e-15 Score=127.96 Aligned_cols=214 Identities=10% Similarity=0.032 Sum_probs=164.8
Q ss_pred CCCEEEEEecCCCeEEEEEcCCCeEEE-eccCC-CCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccc-
Q 014755 101 DSRHILTTSDFQLRLTVWSLLNTACVH-VQSPK-HASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDT- 177 (419)
Q Consensus 101 ~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~- 177 (419)
.++.|++++.++ .|.+||.++|+.+. +..+. ..+.++.++|+|+.+++ . + +.|+.||. +++.+..+..+.
T Consensus 4 ~~~~lv~~~~~~-~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs-~-~---~~V~~~d~-~G~~~W~~~~~~~ 76 (276)
T 3no2_A 4 PQHLLVGGSGWN-KIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS-Y-S---KGAKMITR-DGRELWNIAAPAG 76 (276)
T ss_dssp CCEEEEECTTCS-EEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE-C-B---SEEEEECT-TSCEEEEEECCTT
T ss_pred CCcEEEeeCCCC-EEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe-C-C---CCEEEECC-CCCEEEEEcCCCC
Confidence 356677777776 99999999999887 54443 46789999999998883 2 2 58999999 799888888753
Q ss_pred cceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCC----CCceeEEEEccCCCeEEEEEecCcEEEEEcCC
Q 014755 178 LDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYES----GLGVKSISWSPCGQFLAVGSYDQTLRVLNHLT 253 (419)
Q Consensus 178 ~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~----~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~ 253 (419)
..+.++.+.|+|+.++.... .++.+..+|.+|+.+..+..... ......+++.++|+++++...++.|..||.+
T Consensus 77 ~~~~~~~~~~dG~~lv~~~~-~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~- 154 (276)
T 3no2_A 77 CEMQTARILPDGNALVAWCG-HPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN- 154 (276)
T ss_dssp CEEEEEEECTTSCEEEEEES-TTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-
T ss_pred ccccccEECCCCCEEEEecC-CCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-
Confidence 46888999999999887322 26788889999998887764321 0135567889999999999999999999987
Q ss_pred ceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCC
Q 014755 254 WKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPK 333 (419)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (419)
|+.+.++...
T Consensus 155 G~~~w~~~~~---------------------------------------------------------------------- 164 (276)
T 3no2_A 155 GQLLNSVKLS---------------------------------------------------------------------- 164 (276)
T ss_dssp SCEEEEEECS----------------------------------------------------------------------
T ss_pred CCEEEEEECC----------------------------------------------------------------------
Confidence 8887776521
Q ss_pred cceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc-cC------CCeeEEEeCCCCCeEEEEe
Q 014755 334 QGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV-QK------DPIRAATWDPTCTRLVLCT 395 (419)
Q Consensus 334 ~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~-~~------~~v~~~~~s~~~~~l~s~~ 395 (419)
.....+.+.++|++++++..+ +.|..+|..+++++..+. +. ..+..++..++|..+++..
T Consensus 165 ~~~~~~~~~~~g~~~v~~~~~--~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 165 GTPFSSAFLDNGDCLVACGDA--HCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp SCCCEEEECTTSCEEEECBTT--SEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred CCccceeEcCCCCEEEEeCCC--CeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 112346778999999988887 899999999999887764 21 2278889999999888764
No 205
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.76 E-value=6.1e-16 Score=129.65 Aligned_cols=240 Identities=8% Similarity=-0.036 Sum_probs=162.0
Q ss_pred cEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEec-cCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEE
Q 014755 92 GIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQ-SPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIM 170 (419)
Q Consensus 92 ~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~ 170 (419)
...+++++++|+.++++....+.|.+|+..++...... .....+.+++++++++.+++.. + +.|.+||.......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~---~~i~~~d~~~~~~~ 100 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-N---NRVVTLAAGSNNQT 100 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-T---TEEEEECTTCSCCE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-C---CEEEEEeCCCceEe
Confidence 67899999999855525333348999998766544422 2234578999999998555543 3 78999998765433
Q ss_pred EEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEE
Q 014755 171 GVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVL 249 (419)
Q Consensus 171 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~ 249 (419)
.........+..+++.|+|+.++. ...++.|.+|+. +..... . .......+.+++++++|+++++...++.|.+|
T Consensus 101 ~~~~~~~~~p~~i~~~~~g~l~v~--~~~~~~i~~~~~~~~~~~~-~-~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~ 176 (270)
T 1rwi_B 101 VLPFDGLNYPEGLAVDTQGAVYVA--DRGNNRVVKLAAGSKTQTV-L-PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKL 176 (270)
T ss_dssp ECCCCSCSSEEEEEECTTCCEEEE--EGGGTEEEEECTTCCSCEE-C-CCCSCCSCCCEEECTTCCEEEEEGGGTEEEEE
T ss_pred eeecCCcCCCcceEECCCCCEEEE--ECCCCEEEEEECCCceeEe-e-ccccCCCceeEEEeCCCCEEEEECCCCEEEEE
Confidence 221122356889999999985554 234678999987 332222 1 11122257899999999877766667899999
Q ss_pred EcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCC
Q 014755 250 NHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDK 329 (419)
Q Consensus 250 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (419)
|...........
T Consensus 177 ~~~~~~~~~~~~-------------------------------------------------------------------- 188 (270)
T 1rwi_B 177 EAESNNQVVLPF-------------------------------------------------------------------- 188 (270)
T ss_dssp CTTTCCEEECCC--------------------------------------------------------------------
T ss_pred ecCCCceEeecc--------------------------------------------------------------------
Confidence 976543322110
Q ss_pred CCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec-ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCC
Q 014755 330 PNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL-VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGA 408 (419)
Q Consensus 330 ~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~ 408 (419)
.+...+..++++++|.++++...+ +.|.+|+.......... .+...+.+++++++|+++++...+++|+++++...
T Consensus 189 -~~~~~p~~i~~d~~g~l~v~~~~~--~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 189 -TDITAPWGIAVDEAGTVYVTEHNT--NQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp -SSCCSEEEEEECTTCCEEEEETTT--SCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGG
T ss_pred -cCCCCceEEEECCCCCEEEEECCC--CcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCc
Confidence 011336789999999877777766 89999998766544433 24467899999999998888889999999999865
Q ss_pred eE
Q 014755 409 YC 410 (419)
Q Consensus 409 ~~ 410 (419)
+.
T Consensus 266 ~~ 267 (270)
T 1rwi_B 266 HH 267 (270)
T ss_dssp GS
T ss_pred cc
Confidence 53
No 206
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.72 E-value=1.4e-14 Score=124.28 Aligned_cols=233 Identities=9% Similarity=0.089 Sum_probs=162.3
Q ss_pred cCeEEcCCCCEEEE--------EeCCeEEEEecCCCcEEEEee-----cCcceeEEEEecC-CCeEEEEeccCCeEEEEE
Q 014755 11 GPSCFSPNARYIAV--------AVDYRLVVRDAHSFKVVQLFS-----CLDKISYIEWALD-SEYILCGLYKRLMIQAWS 76 (419)
Q Consensus 11 ~~~~~s~d~~~la~--------~~~~~i~i~~~~~~~~~~~~~-----~~~~v~~~~~s~~-~~~l~~~~~~~g~i~iw~ 76 (419)
..++|+++|+++++ ..++.|.+||..+++...... +...+..++++++ |+++++.. . +.|.+||
T Consensus 21 ~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~-~~l~~~d 98 (314)
T 1pjx_A 21 EGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-R-LGLLVVQ 98 (314)
T ss_dssp EEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-T-TEEEEEE
T ss_pred cCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-C-CCEEEEe
Confidence 34899999988887 347889999998888765443 4467899999999 76555543 4 4799999
Q ss_pred ccCCcceee-eec----CCccEeEEEECCCCCEEEEEecCC--------------CeEEEEEcCCCeEEEeccCCCCeee
Q 014755 77 LTQPEWTCK-IDE----GLAGIAYARWSPDSRHILTTSDFQ--------------LRLTVWSLLNTACVHVQSPKHASKG 137 (419)
Q Consensus 77 ~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~l~~~~~~~--------------~~i~iwd~~~~~~~~~~~~~~~~~~ 137 (419)
.+ ++.... ... ....+.++++.++|+.+++...++ +.|..++.. ++...+.........
T Consensus 99 ~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~ 176 (314)
T 1pjx_A 99 TD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNG 176 (314)
T ss_dssp TT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEE
T ss_pred CC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCcce
Confidence 88 664322 211 123478999999998777665431 367777776 555443333344678
Q ss_pred EEEc----cCCCEEEEEeecCCCCeEEEEecc-CCeE-----EEEEeccc-cceeeeeECCCCCeEEEEcCCCCceEEEE
Q 014755 138 VAFT----QDGKFAAICTRRDCKDYINLLSCH-TWEI-----MGVFAVDT-LDLADIEWSPDDSAIVIWDSPLEYKVLIY 206 (419)
Q Consensus 138 ~~~~----~~~~~l~~~~~~~~~g~v~i~d~~-~~~~-----~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~~~~~i~~~ 206 (419)
++++ |+++.++++... .+.|.+||++ +++. ...+..+. ..+..++++++|+.++. ...++.|.+|
T Consensus 177 i~~~~~~d~dg~~l~v~~~~--~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~--~~~~~~i~~~ 252 (314)
T 1pjx_A 177 IAVRHMNDGRPYQLIVAETP--TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVA--NWGSSHIEVF 252 (314)
T ss_dssp EEEEECTTSCEEEEEEEETT--TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEE--EETTTEEEEE
T ss_pred EEEecccCCCCCEEEEEECC--CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEE--EcCCCEEEEE
Confidence 9999 999777666532 2689999986 4442 22222222 45788999999987665 3346799999
Q ss_pred cCC-CceEEEEeecCCCCceeEEEEccCCCeEEEEE-ecCcEEEEEcCC
Q 014755 207 SPD-GRCLLKYQAYESGLGVKSISWSPCGQFLAVGS-YDQTLRVLNHLT 253 (419)
Q Consensus 207 d~~-~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~v~d~~~ 253 (419)
|.. ++.+..+..+.. .+.+++++|+|+.|+.++ .++.|..|++..
T Consensus 253 d~~~g~~~~~~~~~~~--~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 253 GPDGGQPKMRIRCPFE--KPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp CTTCBSCSEEEECSSS--CEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred cCCCCcEeEEEeCCCC--CceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 995 877777665433 789999999999565554 557899999764
No 207
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.72 E-value=2.2e-14 Score=123.04 Aligned_cols=245 Identities=9% Similarity=0.059 Sum_probs=165.6
Q ss_pred ecCCccEeEEEECCCCCEEEE-------EecCCCeEEEEEcCCCeEEEecc-----CCCCeeeEEEccC-CCEEEEEeec
Q 014755 87 DEGLAGIAYARWSPDSRHILT-------TSDFQLRLTVWSLLNTACVHVQS-----PKHASKGVAFTQD-GKFAAICTRR 153 (419)
Q Consensus 87 ~~~~~~v~~~~~~~~~~~l~~-------~~~~~~~i~iwd~~~~~~~~~~~-----~~~~~~~~~~~~~-~~~l~~~~~~ 153 (419)
........+++|++++..+++ ...++ .|..||..+++...+.. +...+.+++++++ ++.+++.. .
T Consensus 14 ~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~-~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~ 91 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAG-EILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-R 91 (314)
T ss_dssp ECCCTTCEEEEECTTSCEEEEETTCEETTEECC-EEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-T
T ss_pred hccCCCccCceECCCCCEEEEEeccccCCCCCC-EEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-C
Confidence 344455689999999987666 34455 89999998887765433 3356789999999 65454443 2
Q ss_pred CCCCeEEEEeccCCeEEEE-Eec----cccceeeeeECCCCCeEEEEcCCC--------------CceEEEEcCCCceEE
Q 014755 154 DCKDYINLLSCHTWEIMGV-FAV----DTLDLADIEWSPDDSAIVIWDSPL--------------EYKVLIYSPDGRCLL 214 (419)
Q Consensus 154 ~~~g~v~i~d~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~l~~~~~~~--------------~~~i~~~d~~~~~~~ 214 (419)
+.|.+||.+ ++.... ... ....+..+++.++|+.++.. ... .+.|+.++.+++...
T Consensus 92 ---~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~ 166 (314)
T 1pjx_A 92 ---LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITA-PAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQ 166 (314)
T ss_dssp ---TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEE-CBCBCTTSCCCBTTSSSCEEEEEECTTSCEEE
T ss_pred ---CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEe-cCcccccccccccccCCCCeEEEECCCCCEEE
Confidence 479999988 665433 221 12357899999999876652 221 167888888755443
Q ss_pred EEeecCCCCceeEEEEc----cCCCeEEEE-EecCcEEEEEcC-CceeeeeecccccccCCCccceeccCCCccccccee
Q 014755 215 KYQAYESGLGVKSISWS----PCGQFLAVG-SYDQTLRVLNHL-TWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSE 288 (419)
Q Consensus 215 ~~~~~~~~~~v~~~~~s----~~~~~l~~~-~~d~~i~v~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (419)
..... . ....++++ |+++.++.+ ..++.|.+||.. +++...... +..
T Consensus 167 ~~~~~-~--~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~-------------~~~----------- 219 (314)
T 1pjx_A 167 VDTAF-Q--FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKV-------------WGH----------- 219 (314)
T ss_dssp EEEEE-S--SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEE-------------EEE-----------
T ss_pred eccCC-C--CcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceE-------------EEE-----------
Confidence 33322 2 47889999 999766555 457889999976 333211000 000
Q ss_pred eeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCC-cceEEEEEccCCeEEEEecCCCCceEEEeeccCC
Q 014755 289 LCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPK-QGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQ 367 (419)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~ 367 (419)
+..+. .....++++++|+++++...+ +.|.+||.+++
T Consensus 220 ----------------------------------------~~~~~~~~p~~i~~d~~G~l~v~~~~~--~~i~~~d~~~g 257 (314)
T 1pjx_A 220 ----------------------------------------IPGTHEGGADGMDFDEDNNLLVANWGS--SHIEVFGPDGG 257 (314)
T ss_dssp ----------------------------------------CCCCSSCEEEEEEEBTTCCEEEEEETT--TEEEEECTTCB
T ss_pred ----------------------------------------CCCCCCCCCCceEECCCCCEEEEEcCC--CEEEEEcCCCC
Confidence 00122 346779999999988887666 89999999877
Q ss_pred Cceeecc-cCCCeeEEEeCCCCCeE-EEEeCCCcEEEeecCC
Q 014755 368 EPAAILV-QKDPIRAATWDPTCTRL-VLCTGSSHLYMWTPSG 407 (419)
Q Consensus 368 ~~~~~~~-~~~~v~~~~~s~~~~~l-~s~~~dg~i~vw~~~~ 407 (419)
+....+. +...+.+++|+|+++.| ++...++.|..|++..
T Consensus 258 ~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 258 QPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp SCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred cEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 7665554 55789999999999955 5555678999999874
No 208
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.70 E-value=6.3e-14 Score=124.00 Aligned_cols=233 Identities=9% Similarity=-0.007 Sum_probs=161.4
Q ss_pred cCeEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCC-eEEEEEccCCcceeee--
Q 014755 11 GPSCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRL-MIQAWSLTQPEWTCKI-- 86 (419)
Q Consensus 11 ~~~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g-~i~iw~~~~~~~~~~~-- 86 (419)
..++|+|+|+++++.. ++.|++||..++++........... ++|+|+++.|+++..+.+ .|.+++..++.....+
T Consensus 134 ~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~ 212 (409)
T 3hrp_A 134 WGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQ 212 (409)
T ss_dssp EEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEE
T ss_pred eEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeee
Confidence 3489999998666665 5789999999888777665444444 999999999988876533 8999998776544343
Q ss_pred --ecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEe----ccCCCCe--e-eEEEccCCCEEEEEeecCCCC
Q 014755 87 --DEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHV----QSPKHAS--K-GVAFTQDGKFAAICTRRDCKD 157 (419)
Q Consensus 87 --~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~----~~~~~~~--~-~~~~~~~~~~l~~~~~~~~~g 157 (419)
......+.+++++|++..|+++..++ .|+.||..++....+ ....... . .++|+|++..|+++... .+
T Consensus 213 ~~~~~~~~p~~iav~p~~g~lyv~d~~~-~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~--~~ 289 (409)
T 3hrp_A 213 LGSTFSGKIGAVALDETEEWLYFVDSNK-NFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN--LS 289 (409)
T ss_dssp CCTTSCSCCCBCEECTTSSEEEEECTTC-EEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT--TT
T ss_pred ccchhcCCcEEEEEeCCCCeEEEEECCC-cEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC--CC
Confidence 22445678899999666666665544 899999988765443 1111111 3 99999976666665543 37
Q ss_pred eEEEEeccCCeEEEEEeccc---------------cceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecC-
Q 014755 158 YINLLSCHTWEIMGVFAVDT---------------LDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYE- 220 (419)
Q Consensus 158 ~v~i~d~~~~~~~~~~~~~~---------------~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~- 220 (419)
.|+.|+.... +..+.++. .....++++|+|+ +++.+...++.|+.|++ ++. +..+....
T Consensus 290 ~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~I~~~~~~~G~-v~~~~g~~~ 365 (409)
T 3hrp_A 290 SVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYCLRKLDILDGY-VSTVAGQVD 365 (409)
T ss_dssp EEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCEEEEEETTTTE-EEEEEECTT
T ss_pred EEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCEEEEEECCCCE-EEEEeCCCC
Confidence 8999997743 22222221 3478899999998 55544315789999996 665 44444331
Q ss_pred ------------CCCceeEEEEccCCCeEEEEEecCcEEEEEc
Q 014755 221 ------------SGLGVKSISWSPCGQFLAVGSYDQTLRVLNH 251 (419)
Q Consensus 221 ------------~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~ 251 (419)
.......++++++|.++++-..++.|+.+++
T Consensus 366 ~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 366 VASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 0125889999999888777777888888775
No 209
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.69 E-value=8.9e-15 Score=138.95 Aligned_cols=239 Identities=15% Similarity=0.053 Sum_probs=164.3
Q ss_pred eEEcCCCCEEEEEe--C----CeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccC------------CeEEE
Q 014755 13 SCFSPNARYIAVAV--D----YRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKR------------LMIQA 74 (419)
Q Consensus 13 ~~~s~d~~~la~~~--~----~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~------------g~i~i 74 (419)
++|||||++||.+. . ..|++||+++++.+...-+......++|+ ||+.|++++.++ ..|++
T Consensus 134 ~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~ 212 (693)
T 3iuj_A 134 LSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYF 212 (693)
T ss_dssp EEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEE
T ss_pred EEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEE
Confidence 68999999999874 1 35999999999976643222224678999 999999988662 24999
Q ss_pred EEccCCcce-eeee---c-CCccEeEEEECCCCCEEEEEecC---CCeEEEEEcCCC--eEEEeccCCCCeeeEEEccCC
Q 014755 75 WSLTQPEWT-CKID---E-GLAGIAYARWSPDSRHILTTSDF---QLRLTVWSLLNT--ACVHVQSPKHASKGVAFTQDG 144 (419)
Q Consensus 75 w~~~~~~~~-~~~~---~-~~~~v~~~~~~~~~~~l~~~~~~---~~~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~ 144 (419)
|++.++... ..+. . +......+.|+|||++|+..... ...|+++|+.++ +...+..+....... +++++
T Consensus 213 ~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g 291 (693)
T 3iuj_A 213 HRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKG 291 (693)
T ss_dssp EETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEET
T ss_pred EECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccC
Confidence 999876532 1222 2 23346789999999998765431 238999999876 445555555544444 67778
Q ss_pred CEEEEEeecC-CCCeEEEEeccCCeE--EEEEeccccceeeeeECCCCCeEEEEcCC-CCceEEEEcCCCceEEEEeecC
Q 014755 145 KFAAICTRRD-CKDYINLLSCHTWEI--MGVFAVDTLDLADIEWSPDDSAIVIWDSP-LEYKVLIYSPDGRCLLKYQAYE 220 (419)
Q Consensus 145 ~~l~~~~~~~-~~g~v~i~d~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~~~~i~~~d~~~~~~~~~~~~~ 220 (419)
..|+..+..+ ..+.|..+|+.++.. .+.+..+...+. .|+++++.|++.... ....|++|++++.....+....
T Consensus 292 ~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~p~ 369 (693)
T 3iuj_A 292 STLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKRVREVALPG 369 (693)
T ss_dssp TEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCEEEEECCSS
T ss_pred CEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCeeEEeecCC
Confidence 7777665432 246899999987643 234555555554 889999988763221 1237999999777666665332
Q ss_pred CCCceeEEEEccCCCeEEEEEec----CcEEEEEcCCcee
Q 014755 221 SGLGVKSISWSPCGQFLAVGSYD----QTLRVLNHLTWKT 256 (419)
Q Consensus 221 ~~~~v~~~~~s~~~~~l~~~~~d----~~i~v~d~~~~~~ 256 (419)
...+..+.++++++.++....+ ++++.||+.+++.
T Consensus 370 -~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 370 -LGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp -SSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred -CceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 2257778888898877766555 7899999887753
No 210
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.69 E-value=5.6e-15 Score=127.34 Aligned_cols=279 Identities=6% Similarity=-0.106 Sum_probs=181.0
Q ss_pred CCCEEEEEe--CC----eEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEec---------cCCeEEEEEccCCc
Q 014755 18 NARYIAVAV--DY----RLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLY---------KRLMIQAWSLTQPE 81 (419)
Q Consensus 18 d~~~la~~~--~~----~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~---------~~g~i~iw~~~~~~ 81 (419)
+...+++.. ++ +|.++|..+++.+..+. ...+ .+.++||+++++++.. +++.|.+||+.+++
T Consensus 30 ~~~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~ 107 (368)
T 1mda_H 30 ISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL 107 (368)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC
T ss_pred CCCeEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC
Confidence 445555554 33 78899999999998876 3344 7999999999998862 23689999999999
Q ss_pred ceeeeecC-------CccEeEEEECCCCCEEEEEecC-CCeEEE--EEcCCCeEEEeccCCCCeeeEEEccCCCEEEE-E
Q 014755 82 WTCKIDEG-------LAGIAYARWSPDSRHILTTSDF-QLRLTV--WSLLNTACVHVQSPKHASKGVAFTQDGKFAAI-C 150 (419)
Q Consensus 82 ~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~~-~~~i~i--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~ 150 (419)
.+.++..+ ......++++|||++++++... ...+.+ +|+.+ ...+... . +..+.|+++..+. .
T Consensus 108 vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t--v~~i~v~-~---~~~~~p~g~~~~~~~ 181 (368)
T 1mda_H 108 PIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--DQLTKSA-S---CFHIHPGAAATHYLG 181 (368)
T ss_dssp EEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--EEEEECS-S---CCCCEEEETTEEECC
T ss_pred EEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh--ceEEECC-C---ceEEccCCCeEEEEE
Confidence 98887543 1235689999999999998742 337888 88877 2223211 1 1223455543333 3
Q ss_pred eecCCCCeEEEEeccC-----CeEEE----EEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCce---EEEEee
Q 014755 151 TRRDCKDYINLLSCHT-----WEIMG----VFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRC---LLKYQA 218 (419)
Q Consensus 151 ~~~~~~g~v~i~d~~~-----~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~---~~~~~~ 218 (419)
+.+ +.+.+.|+.+ ++... .+.....+. . .+++..++. .+. +.+.+.|..+.. +..+..
T Consensus 182 ~~d---g~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~--vs~-~~V~viD~~~~~~~v~~~~~~ 251 (368)
T 1mda_H 182 SCP---ASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVW--AVA-SSILQGDIPAAGATMKAAIDG 251 (368)
T ss_dssp CCT---TSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEE--CBS-SCCEEEECCSSCCEEECCCCS
T ss_pred cCC---CCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEE--EcC-CEEEEEECCCCcceEEEEEEe
Confidence 332 6777778776 33221 111112222 3 556666655 333 889999984322 221211
Q ss_pred cC-----CC---CceeEEEEccCCCeEEEEEe---------cCcEEEEEcCCceeeeeecccccccCCCccceeccCCCc
Q 014755 219 YE-----SG---LGVKSISWSPCGQFLAVGSY---------DQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEP 281 (419)
Q Consensus 219 ~~-----~~---~~v~~~~~s~~~~~l~~~~~---------d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (419)
.. .. .....++++|+++.++++.. ++.+.++|+.+++.+..+...
T Consensus 252 ~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg------------------ 313 (368)
T 1mda_H 252 NESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG------------------ 313 (368)
T ss_dssp SCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE------------------
T ss_pred ccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECC------------------
Confidence 00 00 01223789999998876543 235669999999888776411
Q ss_pred ccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEE-EEec-CCCCceE
Q 014755 282 LQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYI-CTRN-DSMPTTL 359 (419)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l-~~~~-~d~~~~i 359 (419)
.....++|+|||+++ ++.. .+ +.|
T Consensus 314 ----------------------------------------------------~~p~gi~~s~Dg~~l~va~~~~~--~~V 339 (368)
T 1mda_H 314 ----------------------------------------------------HDSDAIIAAQDGASDNYANSAGT--EVL 339 (368)
T ss_dssp ----------------------------------------------------EEECEEEECCSSSCEEEEEETTT--TEE
T ss_pred ----------------------------------------------------CCcceEEECCCCCEEEEEccCCC--CeE
Confidence 124679999999854 4444 46 999
Q ss_pred EEeeccCCCceeecccCCCeeEEEeCC
Q 014755 360 WIWDICRQEPAAILVQKDPIRAATWDP 386 (419)
Q Consensus 360 ~iwd~~~~~~~~~~~~~~~v~~~~~s~ 386 (419)
.++|+.+++.+..+.-......+++.+
T Consensus 340 sVID~~t~kvv~~I~vg~~P~~i~~~~ 366 (368)
T 1mda_H 340 DIYDAASDQDQSSVELDKGPESLSVQN 366 (368)
T ss_dssp EEEESSSCEEEEECCCCSCCCEEECCC
T ss_pred EEEECCCCcEEEEEECCCCCCEEEeec
Confidence 999999999998887666677777765
No 211
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.69 E-value=9.6e-14 Score=122.85 Aligned_cols=252 Identities=8% Similarity=-0.081 Sum_probs=164.8
Q ss_pred ccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEE
Q 014755 91 AGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIM 170 (419)
Q Consensus 91 ~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~ 170 (419)
.....++|+++++.+++...++ .|++||..+++...+........ ++|+++++.|+++..+. ...|.+++...+...
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~-~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~-~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDP-RVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEG-THTVYVYMKASGWAP 207 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTT-EEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSST-TCEEEEEEGGGTTCE
T ss_pred CCceEEEEeCCCCEEEEecCCC-cEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCC-CceEEEEEcCCCcee
Confidence 3578999999998555444444 99999999888777443333344 99999999988887642 128999998765443
Q ss_pred EEE---ec-cccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEee---cCCCCc-ee-EEEEccC-CCeEEEE
Q 014755 171 GVF---AV-DTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQA---YESGLG-VK-SISWSPC-GQFLAVG 240 (419)
Q Consensus 171 ~~~---~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~---~~~~~~-v~-~~~~s~~-~~~l~~~ 240 (419)
..+ .. ....+.+++++|++..|++.+ .++.|+.||..+.....+.. ...... .. .++|+|+ +.++++-
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d--~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVD--SNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEEC--TTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEE--CCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEe
Confidence 333 12 345678999999666666643 37899999994443444411 111111 13 9999995 5555555
Q ss_pred EecCcEEEEEcCCceeeeeec-ccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCC
Q 014755 241 SYDQTLRVLNHLTWKTFAEFM-HLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPIS 319 (419)
Q Consensus 241 ~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (419)
..++.|+.|+.... +..+. ..... + +. ++ .
T Consensus 286 ~~~~~I~~~~~~g~--~~~~~g~~~~~-g------~~-----dg----------------------------~------- 316 (409)
T 3hrp_A 286 QNLSSVYKITPDGE--CEWFCGSATQK-T------VQ-----DG----------------------------L------- 316 (409)
T ss_dssp TTTTEEEEECTTCC--EEEEEECTTCC-S------CB-----CE----------------------------E-------
T ss_pred CCCCEEEEEecCCC--EEEEEeCCCCC-C------cC-----CC----------------------------c-------
Confidence 56788999986542 22211 10000 0 00 00 0
Q ss_pred CCCCCCCCCCCCCCcceEEEEEccCCeEEEEec-CCCCceEEEeeccCCCceeeccc---------------CCCeeEEE
Q 014755 320 LPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRN-DSMPTTLWIWDICRQEPAAILVQ---------------KDPIRAAT 383 (419)
Q Consensus 320 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-~d~~~~i~iwd~~~~~~~~~~~~---------------~~~v~~~~ 383 (419)
...........++++|+|+++++-. .+ +.|+.|++.++++..+.++ -.....++
T Consensus 317 --------~~~~~~~~P~gia~d~dG~lyvad~~~~--~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~gia 386 (409)
T 3hrp_A 317 --------REEALFAQPNGMTVDEDGNFYIVDGFKG--YCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDIC 386 (409)
T ss_dssp --------GGGCBCSSEEEEEECTTCCEEEEETTTT--CEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEE
T ss_pred --------ccccEeCCCeEEEEeCCCCEEEEeCCCC--CEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEE
Confidence 0000112357899999999777777 66 9999999888877666554 24588999
Q ss_pred eCCCCCeEEEEeCCCcEEEeecC
Q 014755 384 WDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 384 ~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
++++|.++++-..+++|+.++++
T Consensus 387 vd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 387 YDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp ECSSSEEEEEESTTCEEEEEEEC
T ss_pred EcCCCCEEEEECCCCeEEEEEeC
Confidence 99998888888888899888764
No 212
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.68 E-value=4.1e-13 Score=113.91 Aligned_cols=228 Identities=11% Similarity=0.073 Sum_probs=157.2
Q ss_pred ccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEE
Q 014755 91 AGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIM 170 (419)
Q Consensus 91 ~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~ 170 (419)
.-..+..|++++..|+.+...++.|..||..+++...+. ....+.+++++++|++++. .. +.|.+||.++++..
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~~~~i~~~~dG~l~v~-~~----~~l~~~d~~~g~~~ 86 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVT-MDAPVSSVALRQSGGYVAT-IG----TKFCALNWKEQSAV 86 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE-CSSCEEEEEEBTTSSEEEE-ET----TEEEEEETTTTEEE
T ss_pred ccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEe-CCCceEEEEECCCCCEEEE-EC----CeEEEEECCCCcEE
Confidence 345688999987777777655559999999988765432 3467899999999995544 32 58999999887654
Q ss_pred EEEecc----ccceeeeeECCCCCeEEEEcC---------CCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeE
Q 014755 171 GVFAVD----TLDLADIEWSPDDSAIVIWDS---------PLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFL 237 (419)
Q Consensus 171 ~~~~~~----~~~v~~~~~~~~~~~l~~~~~---------~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 237 (419)
...... ...+..++++|+|++++.... ...+.|+.++.+++........ . ..+.++|+|+++.|
T Consensus 87 ~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~-~--~pngi~~spdg~~l 163 (297)
T 3g4e_A 87 VLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQV-D--ISNGLDWSLDHKIF 163 (297)
T ss_dssp EEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEE-S--BEEEEEECTTSCEE
T ss_pred EEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeecc-c--cccceEEcCCCCEE
Confidence 433321 234788999999996664211 1235677777766554433322 2 57899999999877
Q ss_pred EEE-EecCcEEEEEc--CCceeee--eecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEE
Q 014755 238 AVG-SYDQTLRVLNH--LTWKTFA--EFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYE 312 (419)
Q Consensus 238 ~~~-~~d~~i~v~d~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (419)
+.+ +.++.|.+|++ .+++... .+.. +
T Consensus 164 yv~~~~~~~i~~~~~d~~~G~~~~~~~~~~------------~------------------------------------- 194 (297)
T 3g4e_A 164 YYIDSLSYSVDAFDYDLQTGQISNRRSVYK------------L------------------------------------- 194 (297)
T ss_dssp EEEEGGGTEEEEEEECTTTCCEEEEEEEEE------------C-------------------------------------
T ss_pred EEecCCCCcEEEEeccCCCCcccCcEEEEE------------C-------------------------------------
Confidence 554 45788999987 4443211 1100 0
Q ss_pred eccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc-cCCCeeEEEeC-CCCCe
Q 014755 313 VMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV-QKDPIRAATWD-PTCTR 390 (419)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s-~~~~~ 390 (419)
..+......++++++|++.++.... +.|..||.++++++..+. +...+++++|. |+++.
T Consensus 195 -----------------~~~~~~p~g~~~d~~G~lwva~~~~--~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~ 255 (297)
T 3g4e_A 195 -----------------EKEEQIPDGMCIDAEGKLWVACYNG--GRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSE 255 (297)
T ss_dssp -----------------CGGGCEEEEEEEBTTSCEEEEEETT--TEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCE
T ss_pred -----------------CCCCCCCCeeEECCCCCEEEEEcCC--CEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCE
Confidence 0012235678999999888777766 889999999898887775 55789999998 88886
Q ss_pred EEEEe
Q 014755 391 LVLCT 395 (419)
Q Consensus 391 l~s~~ 395 (419)
|..++
T Consensus 256 L~vt~ 260 (297)
T 3g4e_A 256 MYVTC 260 (297)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 65444
No 213
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.67 E-value=2.6e-13 Score=115.09 Aligned_cols=222 Identities=11% Similarity=0.038 Sum_probs=152.5
Q ss_pred cCeEEcCCCCEEEEEe--CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeec
Q 014755 11 GPSCFSPNARYIAVAV--DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDE 88 (419)
Q Consensus 11 ~~~~~s~d~~~la~~~--~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~ 88 (419)
....|+|++..|+... .+.|..||..+++. ..+.....+.+++++|+|+++++ . + +.|.+||.++++.......
T Consensus 16 Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~dG~l~v~-~-~-~~l~~~d~~~g~~~~~~~~ 91 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVTMDAPVSSVALRQSGGYVAT-I-G-TKFCALNWKEQSAVVLATV 91 (297)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEECSSCEEEEEEBTTSSEEEE-E-T-TEEEEEETTTTEEEEEEEC
T ss_pred cCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEeCCCceEEEEECCCCCEEEE-E-C-CeEEEEECCCCcEEEEEec
Confidence 3478999766666654 67899999998876 44556678999999999995554 3 4 5799999988765433222
Q ss_pred ----CCccEeEEEECCCCCEEEEEecCC--------CeEEEEEcCC-CeEEEeccCCCCeeeEEEccCCCEEEEEeecCC
Q 014755 89 ----GLAGIAYARWSPDSRHILTTSDFQ--------LRLTVWSLLN-TACVHVQSPKHASKGVAFTQDGKFAAICTRRDC 155 (419)
Q Consensus 89 ----~~~~v~~~~~~~~~~~l~~~~~~~--------~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 155 (419)
....+..+++.|+|+.+++..... ..-.+|.+.. ++...+.........++|+|+++.++++...
T Consensus 92 ~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~-- 169 (297)
T 3g4e_A 92 DNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSL-- 169 (297)
T ss_dssp CTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGG--
T ss_pred CCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCC--
Confidence 123578999999999666543211 1234555442 3433333333445899999999988776543
Q ss_pred CCeEEEEec--cCCeEE-----EEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeE
Q 014755 156 KDYINLLSC--HTWEIM-----GVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKS 227 (419)
Q Consensus 156 ~g~v~i~d~--~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~ 227 (419)
.+.|.+|++ .++... ..+.........+++.++|+..+. ....+.|..||. +|+.+..+..+.. .+++
T Consensus 170 ~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva--~~~~~~v~~~d~~tG~~~~~i~~p~~--~~t~ 245 (297)
T 3g4e_A 170 SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVA--CYNGGRVIRLDPVTGKRLQTVKLPVD--KTTS 245 (297)
T ss_dssp GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEE--EETTTEEEEECTTTCCEEEEEECSSS--BEEE
T ss_pred CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEE--EcCCCEEEEEcCCCceEEEEEECCCC--CceE
Confidence 378999987 455432 222233456788999999976655 233678999999 5998888876644 7999
Q ss_pred EEEc-cCCCeEEEEEe
Q 014755 228 ISWS-PCGQFLAVGSY 242 (419)
Q Consensus 228 ~~~s-~~~~~l~~~~~ 242 (419)
++|. |+++.|+..+.
T Consensus 246 ~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 246 CCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEESGGGCEEEEEEB
T ss_pred EEEeCCCCCEEEEEcC
Confidence 9998 88887766654
No 214
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.67 E-value=1.8e-12 Score=110.14 Aligned_cols=228 Identities=7% Similarity=-0.059 Sum_probs=158.7
Q ss_pred CeEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEe-e-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceee-ee
Q 014755 12 PSCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLF-S-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCK-ID 87 (419)
Q Consensus 12 ~~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~-~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~-~~ 87 (419)
.++++++|++.++.. ++.|.+||.. ++..... . +...+..+++.++|+..++...+ +.|..+|.. ++.... +.
T Consensus 24 ~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~-~~v~~~d~~-g~~~~~~~~ 100 (300)
T 2qc5_A 24 GITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGA-NKIGKLSKK-GGFTEYPLP 100 (300)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTT-TEEEEECTT-SCEEEEECS
T ss_pred eeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCC-CeEEEECCC-CCeEEecCC
Confidence 388999999777765 6889999988 6655422 1 33678999999999877665534 789999987 554322 22
Q ss_pred cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEe--ccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEecc
Q 014755 88 EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHV--QSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCH 165 (419)
Q Consensus 88 ~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~ 165 (419)
.....+..+++.++++.+++....+ .|..+|.. ++...+ ......+..+++.++++..++...+ +.|..+|.
T Consensus 101 ~~~~~~~~i~~~~~g~l~v~~~~~~-~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~---~~i~~~~~- 174 (300)
T 2qc5_A 101 QPDSGPYGITEGLNGDIWFTQLNGD-RIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQN---NSIGRITN- 174 (300)
T ss_dssp STTCCEEEEEECSTTCEEEEETTTT-EEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTT---TEEEEECT-
T ss_pred CCCCCCccceECCCCCEEEEccCCC-eEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCC---CeEEEECC-
Confidence 2345689999999998666655455 89999988 655542 2234567899999999855544322 68999998
Q ss_pred CCeEEEE-EeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecC
Q 014755 166 TWEIMGV-FAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQ 244 (419)
Q Consensus 166 ~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~ 244 (419)
+++.... .......+..+++.++|..++. ....+.|..|+.+++.... ........+.+++++++|++.++...++
T Consensus 175 ~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~--~~~~~~i~~~~~~g~~~~~-~~~~~~~~~~~i~~d~~g~l~v~~~~~~ 251 (300)
T 2qc5_A 175 TGKLEEYPLPTNAAAPVGITSGNDGALWFV--EIMGNKIGRITTTGEISEY-DIPTPNARPHAITAGKNSEIWFTEWGAN 251 (300)
T ss_dssp TCCEEEEECSSTTCCEEEEEECTTSSEEEE--ETTTTEEEEECTTCCEEEE-ECSSTTCCEEEEEECSTTCEEEEETTTT
T ss_pred CCcEEEeeCCCCCCCcceEEECCCCCEEEE--ccCCCEEEEEcCCCcEEEE-ECCCCCCCceEEEECCCCCEEEeccCCC
Confidence 5554432 1223356889999999976655 3346789999996655443 2222233688999999998666655568
Q ss_pred cEEEEEc
Q 014755 245 TLRVLNH 251 (419)
Q Consensus 245 ~i~v~d~ 251 (419)
.|..||.
T Consensus 252 ~i~~~~~ 258 (300)
T 2qc5_A 252 QIGRITN 258 (300)
T ss_dssp EEEEECT
T ss_pred eEEEECC
Confidence 8999987
No 215
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.67 E-value=4.1e-13 Score=115.45 Aligned_cols=220 Identities=11% Similarity=-0.023 Sum_probs=151.7
Q ss_pred CeEEcCCCCEEEEEe--CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeec-
Q 014755 12 PSCFSPNARYIAVAV--DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDE- 88 (419)
Q Consensus 12 ~~~~s~d~~~la~~~--~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~- 88 (419)
..+|+|++..|+... ++.|..||..+++... +.....+.+++|+|+|+++++. . ..|.+||..+++.......
T Consensus 53 gp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~~~~~v~~i~~~~dg~l~v~~--~-~gl~~~d~~~g~~~~~~~~~ 128 (326)
T 2ghs_A 53 GPTFDPASGTAWWFNILERELHELHLASGRKTV-HALPFMGSALAKISDSKQLIAS--D-DGLFLRDTATGVLTLHAELE 128 (326)
T ss_dssp EEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EECSSCEEEEEEEETTEEEEEE--T-TEEEEEETTTCCEEEEECSS
T ss_pred CCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EECCCcceEEEEeCCCeEEEEE--C-CCEEEEECCCCcEEEEeeCC
Confidence 378999866665554 6789999998876543 4456789999999999877765 3 3599999988875432221
Q ss_pred ---CCccEeEEEECCCCCEEEEEecC-----CCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEE
Q 014755 89 ---GLAGIAYARWSPDSRHILTTSDF-----QLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYIN 160 (419)
Q Consensus 89 ---~~~~v~~~~~~~~~~~l~~~~~~-----~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~ 160 (419)
....+..++++|+|+.+++.... .+.|..++ +++...+.........++|+|+++.++++... .+.|.
T Consensus 129 ~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~--~~~I~ 204 (326)
T 2ghs_A 129 SDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTK--VNRLM 204 (326)
T ss_dssp TTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETT--TCEEE
T ss_pred CCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECC--CCEEE
Confidence 12358899999999976655321 12566666 56655443333346789999999988776543 36899
Q ss_pred EEecc--CC-e-----EEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEc-
Q 014755 161 LLSCH--TW-E-----IMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWS- 231 (419)
Q Consensus 161 i~d~~--~~-~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s- 231 (419)
+|+++ ++ + ....+......+..+++.++|.+.+. ...++.|..||.+++.+..+..... .+.+++|+
T Consensus 205 ~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva--~~~~~~v~~~d~~g~~~~~i~~~~~--~~~~~af~g 280 (326)
T 2ghs_A 205 RVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNA--RWGEGAVDRYDTDGNHIARYEVPGK--QTTCPAFIG 280 (326)
T ss_dssp EEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEE--EETTTEEEEECTTCCEEEEEECSCS--BEEEEEEES
T ss_pred EEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEE--EeCCCEEEEECCCCCEEEEEECCCC--CcEEEEEec
Confidence 99986 55 3 12222223345678999999986655 2235789999998888777765543 69999998
Q ss_pred cCCCeEEEEEec
Q 014755 232 PCGQFLAVGSYD 243 (419)
Q Consensus 232 ~~~~~l~~~~~d 243 (419)
|+++.|+.++..
T Consensus 281 ~d~~~L~vt~~~ 292 (326)
T 2ghs_A 281 PDASRLLVTSAR 292 (326)
T ss_dssp TTSCEEEEEEBC
T ss_pred CCCCEEEEEecC
Confidence 888877665543
No 216
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.65 E-value=4.6e-13 Score=114.09 Aligned_cols=237 Identities=11% Similarity=0.059 Sum_probs=155.9
Q ss_pred cceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEE
Q 014755 81 EWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYIN 160 (419)
Q Consensus 81 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~ 160 (419)
..+..+.........+.|+|+++.|+..+..++.|..|+. +++...+......+..++++++|+++++...+ +.|.
T Consensus 35 ~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~---~~v~ 110 (305)
T 3dr2_A 35 ARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTVDVLLDATAFTNGNAVDAQQRLVHCEHGR---RAIT 110 (305)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCEEEEEESCSCEEEEEECTTSCEEEEETTT---TEEE
T ss_pred CceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCEEEEeCCCCccceeeECCCCCEEEEECCC---CEEE
Confidence 3444555566667889999999977666655559999998 45544455566678999999999866554332 5899
Q ss_pred EEeccCCeEEEEEecc----ccceeeeeECCCCCeEEEEcC---C-------------CCceEEEEcC-CCceEEEEeec
Q 014755 161 LLSCHTWEIMGVFAVD----TLDLADIEWSPDDSAIVIWDS---P-------------LEYKVLIYSP-DGRCLLKYQAY 219 (419)
Q Consensus 161 i~d~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~---~-------------~~~~i~~~d~-~~~~~~~~~~~ 219 (419)
+|+.. ++........ ...+..+++.|+|+.+++ +. . ..+.|+.+|. +++..... .
T Consensus 111 ~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~t-d~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~- 186 (305)
T 3dr2_A 111 RSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFT-DPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D- 186 (305)
T ss_dssp EECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEE-CCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E-
T ss_pred EECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEe-CcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-c-
Confidence 99986 5533222111 134678999999986663 11 0 1367899998 56544333 2
Q ss_pred CCCCceeEEEEccCCCeEEEEEec------CcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccC
Q 014755 220 ESGLGVKSISWSPCGQFLAVGSYD------QTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLND 293 (419)
Q Consensus 220 ~~~~~v~~~~~s~~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (419)
.. ....++|+|+++.|+.+... +.|++|++..+. +.... . +..
T Consensus 187 ~~--~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~---~---------~~~---------------- 235 (305)
T 3dr2_A 187 LD--HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRR---H---------FAS---------------- 235 (305)
T ss_dssp ES--SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEE---E---------EEC----------------
T ss_pred CC--CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCe---E---------EEE----------------
Confidence 22 57889999999988777654 689999987544 21110 0 000
Q ss_pred ccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec
Q 014755 294 DFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL 373 (419)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~ 373 (419)
........++++++|++.++. . +.|.+|+. .++....+
T Consensus 236 -------------------------------------~~~~~pdgi~~d~~G~lwv~~-~---~gv~~~~~-~g~~~~~~ 273 (305)
T 3dr2_A 236 -------------------------------------VPDGLPDGFCVDRGGWLWSSS-G---TGVCVFDS-DGQLLGHI 273 (305)
T ss_dssp -------------------------------------CSSSCCCSEEECTTSCEEECC-S---SEEEEECT-TSCEEEEE
T ss_pred -------------------------------------CCCCCCCeEEECCCCCEEEec-C---CcEEEECC-CCCEEEEE
Confidence 000112347899999955544 4 45999998 46666555
Q ss_pred ccCCCeeEEEeCCCCCeEEEEeCCC
Q 014755 374 VQKDPIRAATWDPTCTRLVLCTGSS 398 (419)
Q Consensus 374 ~~~~~v~~~~~s~~~~~l~s~~~dg 398 (419)
.....+.+++|+|+++.|..++.++
T Consensus 274 ~~~~~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 274 PTPGTASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp ECSSCCCEEEECTTSCEEEEEETTE
T ss_pred ECCCceeEEEEeCCCCEEEEEcCCe
Confidence 4344689999999998888777654
No 217
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.64 E-value=2.8e-14 Score=123.01 Aligned_cols=278 Identities=8% Similarity=-0.097 Sum_probs=174.8
Q ss_pred CCCeEEEEeccCC----eEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEec---------CCCeEEEEEcCCCe
Q 014755 58 DSEYILCGLYKRL----MIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSD---------FQLRLTVWSLLNTA 124 (419)
Q Consensus 58 ~~~~l~~~~~~~g----~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------~~~~i~iwd~~~~~ 124 (419)
....+++.....+ +|.++|..+++.+.++.....+ .+.++||+++++++.. .++.|.+||+.+++
T Consensus 30 ~~~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~ 107 (368)
T 1mda_H 30 ISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL 107 (368)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC
T ss_pred CCCeEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC
Confidence 3345555544334 8889999999999888766666 7999999999999862 23489999999998
Q ss_pred EEE-eccC-------CCCeeeEEEccCCCEEEEEeecCCCCeEEE--EeccCCeEEEEEeccccceeeeeECCCCCeEEE
Q 014755 125 CVH-VQSP-------KHASKGVAFTQDGKFAAICTRRDCKDYINL--LSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVI 194 (419)
Q Consensus 125 ~~~-~~~~-------~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i--~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 194 (419)
.+. +... ......++++|||++++++...+ ...+.+ +|+.+ +..+.... +..+.|+++..++
T Consensus 108 vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~-~~~v~V~~iD~~t---v~~i~v~~----~~~~~p~g~~~~~ 179 (368)
T 1mda_H 108 PIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGS-SAAAGLSVPGASD---DQLTKSAS----CFHIHPGAAATHY 179 (368)
T ss_dssp EEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSS-SCEEEEEETTTEE---EEEEECSS----CCCCEEEETTEEE
T ss_pred EEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCC-CCeEEEEEEchhh---ceEEECCC----ceEEccCCCeEEE
Confidence 887 4332 13457999999999999987431 147888 99877 34443211 1223355554443
Q ss_pred EcCCCCceEEEEcC-C-----CceEEEE--eecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCce--eeeeecccc
Q 014755 195 WDSPLEYKVLIYSP-D-----GRCLLKY--QAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWK--TFAEFMHLS 264 (419)
Q Consensus 195 ~~~~~~~~i~~~d~-~-----~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~--~~~~~~~~~ 264 (419)
. .+.++.+.+.|. + ++..... .......+. . ++++..++..+. +.+.+.|..+.+ .+..+....
T Consensus 180 ~-~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~ 253 (368)
T 1mda_H 180 L-GSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNE 253 (368)
T ss_dssp C-CCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSC
T ss_pred E-EcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEecc
Confidence 2 334666666666 3 2211100 000111122 3 666666666666 899999986532 222221000
Q ss_pred cccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccC
Q 014755 265 TVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSD 344 (419)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 344 (419)
... ....+ .......++++||
T Consensus 254 ~~~---~~~~~--------------------------------------------------------~p~g~~~v~~s~d 274 (368)
T 1mda_H 254 SGR---KADNF--------------------------------------------------------RSAGFQMVAKLKN 274 (368)
T ss_dssp THH---HHTTE--------------------------------------------------------EECSSSCEEEETT
T ss_pred ccc---ccccc--------------------------------------------------------ccCcceeeEEcCC
Confidence 000 00000 0011122689999
Q ss_pred CeEEEEecC---------CCCceEEEeeccCCCceeecccCCCeeEEEeCCCCC-eEEEEe-CCCcEEEeecCCCeEEe
Q 014755 345 SQYICTRND---------SMPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCT-RLVLCT-GSSHLYMWTPSGAYCVS 412 (419)
Q Consensus 345 g~~l~~~~~---------d~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~-~dg~i~vw~~~~~~~~~ 412 (419)
++.++.+.. + +.+.++|+.+.+.+..+.-......++|+|||+ .+++.. .++.|.++|+.+++.++
T Consensus 275 g~~lyV~~~~~~~~~~~~~--~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~ 351 (368)
T 1mda_H 275 TDGIMILTVEHSRSCLAAA--ENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQS 351 (368)
T ss_dssp TTEEEEEEEECSSCTTSCE--EEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEE
T ss_pred CCEEEEEeccccCcccccC--CCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEE
Confidence 987776532 2 456699999999888775444799999999998 456666 59999999999888764
No 218
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.64 E-value=1.1e-13 Score=131.46 Aligned_cols=248 Identities=10% Similarity=0.062 Sum_probs=162.4
Q ss_pred CCccEeEEEECCCCCEEEEEecCC----CeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecC----------
Q 014755 89 GLAGIAYARWSPDSRHILTTSDFQ----LRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRD---------- 154 (419)
Q Consensus 89 ~~~~v~~~~~~~~~~~l~~~~~~~----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---------- 154 (419)
+...+..++|||||++|+.+...+ ..|++||+.+++.+...........++|+ |++.|+++..+.
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~ 205 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSART 205 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------C
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccC
Confidence 344688899999999999764322 37999999999876632222223678999 999999988762
Q ss_pred CCCeEEEEeccCCe----EEEEEec-cccceeeeeECCCCCeEEEEcC--CCCceEEEEcC-CCc-eEEEEeecCCCCce
Q 014755 155 CKDYINLLSCHTWE----IMGVFAV-DTLDLADIEWSPDDSAIVIWDS--PLEYKVLIYSP-DGR-CLLKYQAYESGLGV 225 (419)
Q Consensus 155 ~~g~v~i~d~~~~~----~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~--~~~~~i~~~d~-~~~-~~~~~~~~~~~~~v 225 (419)
....|++|++.+.. .+..... +......+.|+|||++|++... .....|+++|+ ++. ....+..+.. ..
T Consensus 206 ~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~--~~ 283 (693)
T 3iuj_A 206 DQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLD--AD 283 (693)
T ss_dssp CCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSS--SC
T ss_pred CCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCC--ce
Confidence 12359999997754 2222222 3345678999999999876432 23368999998 332 4555554443 34
Q ss_pred eEEEEccCCCeEEEEEe-c---CcEEEEEcCCcee--eeeecccccccCCCccceeccCCCcccccceeeeccCcccccc
Q 014755 226 KSISWSPCGQFLAVGSY-D---QTLRVLNHLTWKT--FAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGN 299 (419)
Q Consensus 226 ~~~~~s~~~~~l~~~~~-d---~~i~v~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (419)
... ++++|..|+..+. + +.|.++|+.++.. ...+.
T Consensus 284 ~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~-------------------------------------- 324 (693)
T 3iuj_A 284 VSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI-------------------------------------- 324 (693)
T ss_dssp EEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE--------------------------------------
T ss_pred EEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEe--------------------------------------
Confidence 444 6777766655543 2 5688888876543 11111
Q ss_pred ccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCc--eEEEeeccCCCceeec-ccC
Q 014755 300 SDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPT--TLWIWDICRQEPAAIL-VQK 376 (419)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~--~i~iwd~~~~~~~~~~-~~~ 376 (419)
.|...+. .|++++++|+....+ ++ .|++|++..+....+. ...
T Consensus 325 -------------------------------~~~~~~~--~~s~~g~~lv~~~~~-~g~~~l~~~d~~g~~~~~l~~p~~ 370 (693)
T 3iuj_A 325 -------------------------------PERQQVL--TVHSGSGYLFAEYMV-DATARVEQFDYEGKRVREVALPGL 370 (693)
T ss_dssp -------------------------------CCCSSCE--EEEEETTEEEEEEEE-TTEEEEEEECTTSCEEEEECCSSS
T ss_pred -------------------------------cCCCCEE--EEEEECCEEEEEEEE-CCeeEEEEEECCCCeeEEeecCCC
Confidence 1222233 889999888776543 13 6899998865544432 355
Q ss_pred CCeeEEEeCCCCCeEEEEeCC----CcEEEeecCCCeEEe
Q 014755 377 DPIRAATWDPTCTRLVLCTGS----SHLYMWTPSGAYCVS 412 (419)
Q Consensus 377 ~~v~~~~~s~~~~~l~s~~~d----g~i~vw~~~~~~~~~ 412 (419)
+.+..+.++++++.|+....+ +++..||+.+++...
T Consensus 371 ~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~ 410 (693)
T 3iuj_A 371 GSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISL 410 (693)
T ss_dssp SEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEE
T ss_pred ceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEE
Confidence 668888899999876655444 789999998776543
No 219
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.64 E-value=4.2e-12 Score=109.10 Aligned_cols=225 Identities=14% Similarity=-0.002 Sum_probs=150.2
Q ss_pred EeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEE
Q 014755 93 IAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGV 172 (419)
Q Consensus 93 v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~ 172 (419)
..++.|+|++..++..+..++.|..||.++++...+. ....+.+++++++++++++. . ..|.+||..+++....
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~v~~i~~~~dg~l~v~~-~----~gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTVHA-LPFMGSALAKISDSKQLIAS-D----DGLFLRDTATGVLTLH 124 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE-CSSCEEEEEEEETTEEEEEE-T----TEEEEEETTTCCEEEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE-CCCcceEEEEeCCCeEEEEE-C----CCEEEEECCCCcEEEE
Confidence 4678899987777666654459999999988765543 34578999999999877654 3 3599999988775433
Q ss_pred Eecc----ccceeeeeECCCCCeEEEEcCC----CCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEE-ec
Q 014755 173 FAVD----TLDLADIEWSPDDSAIVIWDSP----LEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGS-YD 243 (419)
Q Consensus 173 ~~~~----~~~v~~~~~~~~~~~l~~~~~~----~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d 243 (419)
.... ...+..+.++|+|++++..... ..+.|+.++ +++... +..... ....++|+|+++.++.+. .+
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~~-~~~~~~--~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-KGKVTK-LFADIS--IPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-TTEEEE-EEEEES--SEEEEEECTTSCEEEEEETTT
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-CCcEEE-eeCCCc--ccCCeEEcCCCCEEEEEECCC
Confidence 2211 2357899999999866542111 236788887 665433 322222 477899999998776554 46
Q ss_pred CcEEEEEcC--Cc-eeee--eecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCC
Q 014755 244 QTLRVLNHL--TW-KTFA--EFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPI 318 (419)
Q Consensus 244 ~~i~v~d~~--~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (419)
+.|.+|++. ++ +... .+.. +
T Consensus 201 ~~I~~~d~~~~~Gl~~~~~~~~~~------------~------------------------------------------- 225 (326)
T 2ghs_A 201 NRLMRVPLDARTGLPTGKAEVFID------------S------------------------------------------- 225 (326)
T ss_dssp CEEEEEEBCTTTCCBSSCCEEEEE------------C-------------------------------------------
T ss_pred CEEEEEEcccccCCcccCceEEEE------------C-------------------------------------------
Confidence 789999975 44 2110 0000 0
Q ss_pred CCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc-cCCCeeEEEeC-CCCCeEEEEeC
Q 014755 319 SLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV-QKDPIRAATWD-PTCTRLVLCTG 396 (419)
Q Consensus 319 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s-~~~~~l~s~~~ 396 (419)
.........++++++|.+.++...+ +.|.+||. +++....+. +...+++++|+ |+++.|+.++.
T Consensus 226 -----------~~~~~~p~gi~~d~~G~lwva~~~~--~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 226 -----------TGIKGGMDGSVCDAEGHIWNARWGE--GAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp -----------TTSSSEEEEEEECTTSCEEEEEETT--TEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred -----------CCCCCCCCeeEECCCCCEEEEEeCC--CEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEec
Confidence 0011235678999999887777665 88999998 566655554 55679999998 88886654443
No 220
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.64 E-value=4.2e-14 Score=122.11 Aligned_cols=174 Identities=8% Similarity=0.065 Sum_probs=137.2
Q ss_pred cccCeEEcCCCCEEEEEeCCeEEEEecCCCc-----------EEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEc
Q 014755 9 QTGPSCFSPNARYIAVAVDYRLVVRDAHSFK-----------VVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSL 77 (419)
Q Consensus 9 ~~~~~~~s~d~~~la~~~~~~i~i~~~~~~~-----------~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~ 77 (419)
+...+++++...++++|+...+++|+++..+ ......+.. |+.++| |+++|+++ .+ +.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~-~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TR-NALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ES-SEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cC-CcEEEEEc
Confidence 4455999999999999998889999865433 223445667 999999 89999998 45 89999999
Q ss_pred cCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCC
Q 014755 78 TQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKD 157 (419)
Q Consensus 78 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g 157 (419)
.+.........+..++.++.+.+.. ++++..++ .|.+||++++.... ....+++++|+|+| ++.+..| |
T Consensus 114 ~sl~~~~~~~~~~~~v~~i~~~~p~--~av~~~dG-~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG--~~vg~~d---g 182 (388)
T 1xip_A 114 EELSEFRTVTSFEKPVFQLKNVNNT--LVILNSVN-DLSALDLRTKSTKQ---LAQNVTSFDVTNSQ--LAVLLKD---R 182 (388)
T ss_dssp SSTTCEEEEEECSSCEEEEEECSSE--EEEEETTS-EEEEEETTTCCEEE---EEESEEEEEECSSE--EEEEETT---S
T ss_pred hhhhccCccceeecceeeEEecCCC--EEEEECCC-CEEEEEccCCcccc---ccCCceEEEEcCCc--eEEEEcC---C
Confidence 8877666666777788888887653 88888877 99999999877654 33578999999999 5667766 8
Q ss_pred eEEEEeccCCeE--EEEE------e---ccccceeeeeECCCCCeEEEEcCC
Q 014755 158 YINLLSCHTWEI--MGVF------A---VDTLDLADIEWSPDDSAIVIWDSP 198 (419)
Q Consensus 158 ~v~i~d~~~~~~--~~~~------~---~~~~~v~~~~~~~~~~~l~~~~~~ 198 (419)
++++|+...++. .+.+ . .|...|.++.|.+++.+++++...
T Consensus 183 ~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~~~ 234 (388)
T 1xip_A 183 SFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFGNV 234 (388)
T ss_dssp CEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEECC
T ss_pred cEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEcCC
Confidence 999999988775 5555 2 256789999999999999886543
No 221
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.62 E-value=6.5e-13 Score=113.18 Aligned_cols=226 Identities=11% Similarity=-0.004 Sum_probs=154.5
Q ss_pred CeEEcCCCCEEEEEe--CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecC
Q 014755 12 PSCFSPNARYIAVAV--DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEG 89 (419)
Q Consensus 12 ~~~~s~d~~~la~~~--~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~ 89 (419)
..+|+|+|+.|+... ++.|..|+. +++......+...+..++++++|+++++...+ +.|.+|+.+ ++.. .+...
T Consensus 49 gp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~-~~v~~~~~~-g~~~-~~~~~ 124 (305)
T 3dr2_A 49 GPAWWEAQRTLVWSDLVGRRVLGWRE-DGTVDVLLDATAFTNGNAVDAQQRLVHCEHGR-RAITRSDAD-GQAH-LLVGR 124 (305)
T ss_dssp EEEEEGGGTEEEEEETTTTEEEEEET-TSCEEEEEESCSCEEEEEECTTSCEEEEETTT-TEEEEECTT-SCEE-EEECE
T ss_pred CCeEeCCCCEEEEEECCCCEEEEEeC-CCCEEEEeCCCCccceeeECCCCCEEEEECCC-CEEEEECCC-CCEE-EEEec
Confidence 378999999655554 678999998 56555444566778999999999966655433 689999986 5532 22221
Q ss_pred -----CccEeEEEECCCCCEEEE----Eec------------CCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEE
Q 014755 90 -----LAGIAYARWSPDSRHILT----TSD------------FQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAA 148 (419)
Q Consensus 90 -----~~~v~~~~~~~~~~~l~~----~~~------------~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 148 (419)
...+..+++.|+|+..++ +.. ..+.|..+|..+++...+. .......++|+||++.|+
T Consensus 125 ~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~ly 203 (305)
T 3dr2_A 125 YAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLY 203 (305)
T ss_dssp ETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEE
T ss_pred cCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEE
Confidence 124678999999997775 221 1236888888777665543 334568899999999888
Q ss_pred EEeecC---CCCeEEEEeccCCeEE--EEE-eccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCC
Q 014755 149 ICTRRD---CKDYINLLSCHTWEIM--GVF-AVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESG 222 (419)
Q Consensus 149 ~~~~~~---~~g~v~i~d~~~~~~~--~~~-~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 222 (419)
++.... ..+.|++|++...... ..+ .........+++.++|+.. + +. .+.|.+|+.+++.+..+....
T Consensus 204 v~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lw-v--~~-~~gv~~~~~~g~~~~~~~~~~-- 277 (305)
T 3dr2_A 204 VSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLW-S--SS-GTGVCVFDSDGQLLGHIPTPG-- 277 (305)
T ss_dssp EEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEE-E--CC-SSEEEEECTTSCEEEEEECSS--
T ss_pred EEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEE-E--ec-CCcEEEECCCCCEEEEEECCC--
Confidence 776531 0158999998765421 111 1123445678999999844 4 33 345999999998888887654
Q ss_pred CceeEEEEccCCCeEEEEEecCcEEEEE
Q 014755 223 LGVKSISWSPCGQFLAVGSYDQTLRVLN 250 (419)
Q Consensus 223 ~~v~~~~~s~~~~~l~~~~~d~~i~v~d 250 (419)
.+.+++|+|+++.|..++.++ +..++
T Consensus 278 -~~~~~~f~~d~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 278 -TASNCTFDQAQQRLFITGGPC-LWMLP 303 (305)
T ss_dssp -CCCEEEECTTSCEEEEEETTE-EEEEE
T ss_pred -ceeEEEEeCCCCEEEEEcCCe-EEEEE
Confidence 488999999998888877654 43333
No 222
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.60 E-value=7.9e-13 Score=118.41 Aligned_cols=273 Identities=13% Similarity=0.072 Sum_probs=177.9
Q ss_pred eEEEEec-----CCCeEEEEeccCCeEEEEEccCCcceeeeec-CCccEeEEEE-C-CCCCEEEEEec------------
Q 014755 51 SYIEWAL-----DSEYILCGLYKRLMIQAWSLTQPEWTCKIDE-GLAGIAYARW-S-PDSRHILTTSD------------ 110 (419)
Q Consensus 51 ~~~~~s~-----~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~-~~~~v~~~~~-~-~~~~~l~~~~~------------ 110 (419)
..+..|. ||+++++...+++.|.+.|+.+.+....+.- ....+..+++ + |++++++++++
T Consensus 88 hh~~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l 167 (595)
T 1fwx_A 88 HHVHMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNM 167 (595)
T ss_dssp CCEEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSST
T ss_pred CccccCCCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCccc
Confidence 4466666 8999999887777899999999987764432 2245788888 5 99999988852
Q ss_pred -----CCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCC------------CeEEEEeccCCeEEEE
Q 014755 111 -----FQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCK------------DYINLLSCHTWEIMGV 172 (419)
Q Consensus 111 -----~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------------g~v~i~d~~~~~~~~~ 172 (419)
..+.+.+.|.++.+... +.-.. ....++++|+|+++++++.+... ..|.+.|....
T Consensus 168 ~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~----- 241 (595)
T 1fwx_A 168 EDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEI----- 241 (595)
T ss_dssp TCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHH-----
T ss_pred ccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccce-----
Confidence 23489999999988777 33323 56788999999999999876422 12444433211
Q ss_pred EeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-C--Cce-EEEEeecCCCCceeEEEEccCCCeEEEEE-ecCcEE
Q 014755 173 FAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-D--GRC-LLKYQAYESGLGVKSISWSPCGQFLAVGS-YDQTLR 247 (419)
Q Consensus 173 ~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~--~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~ 247 (419)
..+.++|++..+ +.|.+.|. + ++. +..+.... ...++.++|||+++++++ .+.+|.
T Consensus 242 ----------~~~v~~Gk~~~i------~~V~VID~~~~~~~~~~~~Ipvg~---~PhGv~~sPDGk~v~V~~~~s~~Vs 302 (595)
T 1fwx_A 242 ----------EKAIAAGDYQEL------NGVKVVDGRKEASSLFTRYIPIAN---NPHGCNMAPDKKHLCVAGKLSPTVT 302 (595)
T ss_dssp ----------HHHHHHTCSEEE------TTEEEEECSGGGCCSSEEEEEEES---SCCCEEECTTSSEEEEECTTSSBEE
T ss_pred ----------eEeccCCCeeEE------CcEEEEeCcccCCceeEEEEecCC---CceEEEEcCCCCEEEEeCCCCCeEE
Confidence 113345665544 34888998 4 455 55665443 478999999999887776 467999
Q ss_pred EEEcCCceeee--eecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCC
Q 014755 248 VLNHLTWKTFA--EFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKP 325 (419)
Q Consensus 248 v~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (419)
++|+.+.+... .+..... +....
T Consensus 303 Vid~~~~~~~~~~~l~~~~~-------v~~~v------------------------------------------------ 327 (595)
T 1fwx_A 303 VLDVTRFDAVFYENADPRSA-------VVAEP------------------------------------------------ 327 (595)
T ss_dssp EEEGGGHHHHHHSCCCGGGG-------EEECC------------------------------------------------
T ss_pred EEECcccccccccccCcccc-------eEEEc------------------------------------------------
Confidence 99998653210 0110000 00000
Q ss_pred CCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccC----------CCceeecc-cCCC-----eeEEEeCCCCC
Q 014755 326 PTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICR----------QEPAAILV-QKDP-----IRAATWDPTCT 389 (419)
Q Consensus 326 ~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~----------~~~~~~~~-~~~~-----v~~~~~s~~~~ 389 (419)
.-......++|+|+|....+..-| ++|.+||+++ .+.+..+. |..+ -..+.++|||+
T Consensus 328 -----~vG~gP~h~aF~~dG~aY~t~~ld--sqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk 400 (595)
T 1fwx_A 328 -----ELGLGPLHTAFDGRGNAYTSLFLD--SQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATND 400 (595)
T ss_dssp -----BCCSCEEEEEECTTSEEEEEETTT--TEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSS
T ss_pred -----CCCCCcceEEECCCCeEEEEEecC--CcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCC
Confidence 011235779999999433344445 9999999987 44444443 3332 13446799999
Q ss_pred eEEEEeCC--CcE-----------EEeecCCCeE
Q 014755 390 RLVLCTGS--SHL-----------YMWTPSGAYC 410 (419)
Q Consensus 390 ~l~s~~~d--g~i-----------~vw~~~~~~~ 410 (419)
+|+++..- .++ .++|+.++++
T Consensus 401 ~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m 434 (595)
T 1fwx_A 401 WLVCLSKFSKDRFLNVGPLKPENDQLIDISGDKM 434 (595)
T ss_dssp EEEEEESCCTTSSCCCCSSCCEEEEEEECSSSSC
T ss_pred EEEEcCCCCccccccCCCCCCCcceEEEcCCCcE
Confidence 99887541 233 8899976654
No 223
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.60 E-value=2.7e-13 Score=117.52 Aligned_cols=276 Identities=12% Similarity=0.046 Sum_probs=164.5
Q ss_pred cceeEEEEecCCCeEEEEec-cCCeEEEEEccCCcceeeee-------cCCccEeEEEECCCCCEEEEEec-----CCCe
Q 014755 48 DKISYIEWALDSEYILCGLY-KRLMIQAWSLTQPEWTCKID-------EGLAGIAYARWSPDSRHILTTSD-----FQLR 114 (419)
Q Consensus 48 ~~v~~~~~s~~~~~l~~~~~-~~g~i~iw~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~-----~~~~ 114 (419)
..+..++++|+|+.+++... +++.++||.+.+++.. .+. .+...+..+++.++++.+++-.. .. .
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~-~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVP-K 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCC-E
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCC-e
Confidence 67899999999998888642 2243566665555432 221 23456899999999875555433 34 8
Q ss_pred EEEEEcCCCeEEE-eccC------CCCeeeEEEccCCCEEEEEeec-CCCCeEEEEeccCCeEEEEEecccccee-eeeE
Q 014755 115 LTVWSLLNTACVH-VQSP------KHASKGVAFTQDGKFAAICTRR-DCKDYINLLSCHTWEIMGVFAVDTLDLA-DIEW 185 (419)
Q Consensus 115 i~iwd~~~~~~~~-~~~~------~~~~~~~~~~~~~~~l~~~~~~-~~~g~v~i~d~~~~~~~~~~~~~~~~v~-~~~~ 185 (419)
|.+||+.+++.+. +... ......+++++++..++++... ...+.|.+||+.+++..+.+..|..... ...+
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence 9999999988655 3321 1245889999876566555330 0137999999998887666544321110 1333
Q ss_pred CCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecC-cEEEEEcCCceeeeeecccc
Q 014755 186 SPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQ-TLRVLNHLTWKTFAEFMHLS 264 (419)
Q Consensus 186 ~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~-~i~v~d~~~~~~~~~~~~~~ 264 (419)
.++|..+.+. ..++.+..|. . .+..++|+|+|+.|+++..++ .+..++...... ..+. ..
T Consensus 175 ~~~g~~~~~~--~~~g~~~~~~-------------~--~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~-~~~~-~~ 235 (343)
T 2qe8_A 175 VIDGVPVQIG--QPDGTVIRPH-------------L--GVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSN-LQLT-DA 235 (343)
T ss_dssp EETTEECBEE--CTTSCEECCC-------------C--CEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTC-TTCC-HH
T ss_pred eECCEEEEec--cCCCceecee-------------c--ccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcC-CCCC-hh
Confidence 4455444332 2233332221 1 478899999999888887665 444444211000 0000 00
Q ss_pred cccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccC
Q 014755 265 TVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSD 344 (419)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 344 (419)
.+. ..+.. .++......++++++
T Consensus 236 ~~~-----~~~~~----------------------------------------------------~g~~g~pdgia~d~~ 258 (343)
T 2qe8_A 236 ELG-----SKIER----------------------------------------------------YSEKPICDGISIDKD 258 (343)
T ss_dssp HHH-----TTCEE----------------------------------------------------EEECCSCSCEEECTT
T ss_pred hhh-----cceEe----------------------------------------------------cccCCCCceEEECCC
Confidence 000 00000 001112345899999
Q ss_pred CeEEEEecCCCCceEEEeeccCCCceeecc--cCCCeeEEEeCCCCCeEEEEeCCCcEEEe
Q 014755 345 SQYICTRNDSMPTTLWIWDICRQEPAAILV--QKDPIRAATWDPTCTRLVLCTGSSHLYMW 403 (419)
Q Consensus 345 g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~dg~i~vw 403 (419)
|+++++...+ +.|.+||..+++...+.. +...+.+++|.++++++++.+..+.+.+|
T Consensus 259 G~l~va~~~~--~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 259 HNIYVGDLAH--SAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp CCEEEEEGGG--TEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred CCEEEEccCC--CeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcccccccc
Confidence 9998888877 999999985666544443 34568999999999988877755555444
No 224
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.60 E-value=1.1e-12 Score=123.47 Aligned_cols=224 Identities=8% Similarity=-0.030 Sum_probs=140.1
Q ss_pred CCEEEEEe-CCeEEEEecCCCcEEEEeecCcc------------eeEEEEecCCCeEEEEeccCCeEEEEEccCCcceee
Q 014755 19 ARYIAVAV-DYRLVVRDAHSFKVVQLFSCLDK------------ISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCK 85 (419)
Q Consensus 19 ~~~la~~~-~~~i~i~~~~~~~~~~~~~~~~~------------v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~ 85 (419)
+..|++++ ++.|.-+|..+|+.+-.+..... ...+++ ++..+++++.+ +.|..+|..+|+.+..
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~d-g~l~alD~~tG~~~W~ 153 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWD-GRLIALDAATGKEVWH 153 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTT-SEEEEEETTTCCEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCC-CEEEEEECCCCCEEee
Confidence 34455554 78899999999998876653211 122333 45678887766 8999999999998877
Q ss_pred eecC-C----ccEeE-EEECCCCCEEEEEecC-----CCeEEEEEcCCCeEEE-eccCCCC-------------------
Q 014755 86 IDEG-L----AGIAY-ARWSPDSRHILTTSDF-----QLRLTVWSLLNTACVH-VQSPKHA------------------- 134 (419)
Q Consensus 86 ~~~~-~----~~v~~-~~~~~~~~~l~~~~~~-----~~~i~iwd~~~~~~~~-~~~~~~~------------------- 134 (419)
.... . ..+.. ... .+..+++++.. .+.|+.+|.++|+.+. +......
T Consensus 154 ~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~ 231 (677)
T 1kb0_A 154 QNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDP 231 (677)
T ss_dssp EETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCG
T ss_pred ecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccc
Confidence 7654 1 11111 111 23455555431 2499999999998775 3221111
Q ss_pred -------------eeeEEEccCCCEEEEEeecCC----------------CCeEEEEeccCCeEEEEEecccc-------
Q 014755 135 -------------SKGVAFTQDGKFAAICTRRDC----------------KDYINLLSCHTWEIMGVFAVDTL------- 178 (419)
Q Consensus 135 -------------~~~~~~~~~~~~l~~~~~~~~----------------~g~v~i~d~~~~~~~~~~~~~~~------- 178 (419)
...++++|++..++++..+.. .+.|..+|.++++.+-.++....
T Consensus 232 ~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~ 311 (677)
T 1kb0_A 232 SGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTS 311 (677)
T ss_dssp GGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCC
T ss_pred cCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccccccc
Confidence 135788899988888765410 02599999999998877664221
Q ss_pred --ceeeeeECCCC---CeEEEEcCCCCceEEEEcC-CCceEEEEeecCCC---------Cce------------------
Q 014755 179 --DLADIEWSPDD---SAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESG---------LGV------------------ 225 (419)
Q Consensus 179 --~v~~~~~~~~~---~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~---------~~v------------------ 225 (419)
...-+....+| ..+++ ...+|.++++|. +|+.+..+...... ..+
T Consensus 312 ~~~p~l~~~~~dG~~~~~l~~--~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~ 389 (677)
T 1kb0_A 312 TQPMILADIKIAGKPRKVILH--APKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGP 389 (677)
T ss_dssp CSCCEEEEEEETTEEEEEEEE--CCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCT
T ss_pred CCCcEEEecccCCcEeeEEEE--ECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCc
Confidence 12222233366 45555 677899999999 89888766532110 001
Q ss_pred ------eEEEEccCCCeEEEEEecCcEEEE
Q 014755 226 ------KSISWSPCGQFLAVGSYDQTLRVL 249 (419)
Q Consensus 226 ------~~~~~s~~~~~l~~~~~d~~i~v~ 249 (419)
..++++|++.++++...+-...++
T Consensus 390 ~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~ 419 (677)
T 1kb0_A 390 YGAHNWHPMSFNPQTGLVYLPAQNVPVNLM 419 (677)
T ss_dssp TCSSCSSCCEEETTTTEEEEEEEECCCEEE
T ss_pred ccccCCCCceEcCCCCEEEEeChhcceeee
Confidence 257889988888887765444333
No 225
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.59 E-value=1.4e-12 Score=122.97 Aligned_cols=342 Identities=8% Similarity=-0.038 Sum_probs=183.7
Q ss_pred CCEEEEEe-CCeEEEEecCCCcEEEEeecCcc-----------e-eEEEEecCCCeEEEEeccCCeEEEEEccCCcceee
Q 014755 19 ARYIAVAV-DYRLVVRDAHSFKVVQLFSCLDK-----------I-SYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCK 85 (419)
Q Consensus 19 ~~~la~~~-~~~i~i~~~~~~~~~~~~~~~~~-----------v-~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~ 85 (419)
+..|++++ ++.|.-+|..+|+.+-.+..... + ..+.. ++..+++++.+ +.|..+|.++|+.+..
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~d-g~l~AlDa~TG~~~W~ 146 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLD-GRLEAIDAKTGQRAWS 146 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTT-SEEEEEETTTCCEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccC-CEEEEEECCCCCEeee
Confidence 44555555 78899999999998877653211 0 11222 35677888766 8999999999998766
Q ss_pred eecC--CccEeEEEECC---CCCEEEEEec-----CCCeEEEEEcCCCeEEE-eccCC---C------------------
Q 014755 86 IDEG--LAGIAYARWSP---DSRHILTTSD-----FQLRLTVWSLLNTACVH-VQSPK---H------------------ 133 (419)
Q Consensus 86 ~~~~--~~~v~~~~~~~---~~~~l~~~~~-----~~~~i~iwd~~~~~~~~-~~~~~---~------------------ 133 (419)
.... ......+..+| ++. ++++.. ..+.|..||.++|+.+. +.... .
T Consensus 147 ~~~~~~~~~~~~~~~sP~v~~g~-v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 225 (689)
T 1yiq_A 147 VDTRADHKRSYTITGAPRVVNGK-VVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGD 225 (689)
T ss_dssp EECCSCTTSCCBCCSCCEEETTE-EEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSS
T ss_pred ecCcCCCCCCccccCCcEEECCE-EEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCc
Confidence 6542 11111111122 444 444432 12489999999998765 32110 0
Q ss_pred ----------CeeeEEEccCCCEEEEEeecCC----------------CCeEEEEeccCCeEEEEEecccc---------
Q 014755 134 ----------ASKGVAFTQDGKFAAICTRRDC----------------KDYINLLSCHTWEIMGVFAVDTL--------- 178 (419)
Q Consensus 134 ----------~~~~~~~~~~~~~l~~~~~~~~----------------~g~v~i~d~~~~~~~~~~~~~~~--------- 178 (419)
....++++|++..++++..+.. .+.|..+|.++++.+-.++....
T Consensus 226 ~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~ 305 (689)
T 1yiq_A 226 AYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQ 305 (689)
T ss_dssp THHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCS
T ss_pred eeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCC
Confidence 0135788898888888876410 01499999999999877764211
Q ss_pred ceeeeeECCCCC---eEEEEcCCCCceEEEEcC-CCceEEEEeecCCC--------------------------------
Q 014755 179 DLADIEWSPDDS---AIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESG-------------------------------- 222 (419)
Q Consensus 179 ~v~~~~~~~~~~---~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~-------------------------------- 222 (419)
++.......+|+ .++. ...+|.++++|. +|+.+.........
T Consensus 306 ~~~l~d~~~~G~~~~~v~~--~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p 383 (689)
T 1yiq_A 306 HMILAELPIDGKPRKVLMQ--APKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTP 383 (689)
T ss_dssp CEEEEEEEETTEEEEEEEE--CCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESS
T ss_pred CcEEEeeccCCcEEEEEEE--ECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCC
Confidence 111112222454 4555 677899999999 89887544321100
Q ss_pred -----CceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecc-cccccCCCccceeccCCC-cccccceeeeccCcc
Q 014755 223 -----LGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMH-LSTVRGPCFPAVFKEVDE-PLQLDMSELCLNDDF 295 (419)
Q Consensus 223 -----~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 295 (419)
..-..++++|+..++++...+....++...... .+.. ...... ...+..... +++. ......-..
T Consensus 384 ~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~---~~~~~~~~~~~---g~~~~~~p~~~~~~--~~~~~~~~g 455 (689)
T 1yiq_A 384 AFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAP---KRNPFKSMYQL---GLRTGMMPEGAEGL--LEMAKSWSG 455 (689)
T ss_dssp CTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCC---CCCSCTTSCCC---SSEECCCCSSHHHH--HHHHTTCEE
T ss_pred CcccccCCCcceECCCCCEEEEeccccceeeeeccccc---ccccccccccc---CccccccCcccccC--CCCCCCcce
Confidence 001237888988888887766544444332210 0000 000000 000000000 0000 000000001
Q ss_pred ccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc-
Q 014755 296 IQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV- 374 (419)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~- 374 (419)
...+++...|.....+... ..+..-.++..+.+++.++.| +.++.||.++|+++..+.
T Consensus 456 ~l~A~D~~tG~~~W~~~~~-------------------~~~~~g~~~tagglvf~gt~d--g~l~a~D~~tG~~lw~~~~ 514 (689)
T 1yiq_A 456 KLIAWDPVKQQAAWEVPYV-------------------TIFNGGTLSTAGNLVFEGSAD--GRVIAYAADTGEKLWEQPA 514 (689)
T ss_dssp EEEEEETTTTEEEEEEEES-------------------SSCCCCEEEETTTEEEEECTT--SEEEEEETTTCCEEEEEEC
T ss_pred eEEEEECCCCCeEeEccCC-------------------CCccCccceECCCEEEEECCC--CcEEEEECCCCccceeeeC
Confidence 1222233333322222111 011112455677788889888 999999999999987664
Q ss_pred -cCCCeeEEEeCCCCC-eEEEEe
Q 014755 375 -QKDPIRAATWDPTCT-RLVLCT 395 (419)
Q Consensus 375 -~~~~v~~~~~s~~~~-~l~s~~ 395 (419)
+.....-+.|..+|+ ++++.+
T Consensus 515 ~~~~~~~p~ty~~~G~qyv~~~~ 537 (689)
T 1yiq_A 515 ASGVMAAPVTYSVDGEQYVTFMA 537 (689)
T ss_dssp SSCCCSCCEEEEETTEEEEEEEE
T ss_pred CCCcccCceEEEECCEEEEEEEe
Confidence 222334467778888 444443
No 226
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.58 E-value=2.8e-11 Score=100.91 Aligned_cols=237 Identities=11% Similarity=-0.053 Sum_probs=159.6
Q ss_pred CCEEEEEeCCeEEEEecCCCcE-----EEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCcc
Q 014755 19 ARYIAVAVDYRLVVRDAHSFKV-----VQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAG 92 (419)
Q Consensus 19 ~~~la~~~~~~i~i~~~~~~~~-----~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~ 92 (419)
|++|.++..+.|+.+++.+... ...+. ....+..++|+|++..|+.+....+.|..+++........+......
T Consensus 1 ~~~l~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 80 (267)
T 1npe_A 1 GTHLLFAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS 80 (267)
T ss_dssp CEEEEEEEEEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred CcEEEEEcCCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC
Confidence 4577777777899999876542 12222 23467899999988888877665679999999766543333333356
Q ss_pred EeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEE
Q 014755 93 IAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMG 171 (419)
Q Consensus 93 v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~ 171 (419)
...+++.+++..|+.+....+.|.++++....... ..........++++|++..|+.+......+.|..++++... ..
T Consensus 81 p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~ 159 (267)
T 1npe_A 81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RR 159 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CE
T ss_pred ccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cE
Confidence 78999999888888776655599999997644333 22222456899999987777666542113688888876432 22
Q ss_pred EEe-ccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEE-ecCcEEEE
Q 014755 172 VFA-VDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGS-YDQTLRVL 249 (419)
Q Consensus 172 ~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~v~ 249 (419)
.+. ........++++|++..|++.+. ..+.|..+|+++.....+..... ....++.. +..|+.+. ..+.|.++
T Consensus 160 ~~~~~~~~~P~gia~d~~~~~lyv~d~-~~~~I~~~~~~g~~~~~~~~~~~--~P~gi~~d--~~~lyva~~~~~~v~~~ 234 (267)
T 1npe_A 160 ILAQDNLGLPNGLTFDAFSSQLCWVDA-GTHRAECLNPAQPGRRKVLEGLQ--YPFAVTSY--GKNLYYTDWKTNSVIAM 234 (267)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEET-TTTEEEEEETTEEEEEEEEECCC--SEEEEEEE--TTEEEEEETTTTEEEEE
T ss_pred EEEECCCCCCcEEEEcCCCCEEEEEEC-CCCEEEEEecCCCceEEEecCCC--CceEEEEe--CCEEEEEECCCCeEEEE
Confidence 222 22345788999999888887664 46899999996654443322212 45677664 44555554 55799999
Q ss_pred EcCCceeeeeec
Q 014755 250 NHLTWKTFAEFM 261 (419)
Q Consensus 250 d~~~~~~~~~~~ 261 (419)
|..+++.+..+.
T Consensus 235 d~~~g~~~~~i~ 246 (267)
T 1npe_A 235 DLAISKEMDTFH 246 (267)
T ss_dssp ETTTTEEEEEEC
T ss_pred eCCCCCceEEEc
Confidence 999998887775
No 227
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.57 E-value=1.7e-11 Score=106.10 Aligned_cols=243 Identities=10% Similarity=0.037 Sum_probs=153.7
Q ss_pred C--CCCCEEEEEecCCCeEEEEEcCCC----eEEE-ec------c-CCCCeeeEEEccCCCEEEEEeec---CCCCeEEE
Q 014755 99 S--PDSRHILTTSDFQLRLTVWSLLNT----ACVH-VQ------S-PKHASKGVAFTQDGKFAAICTRR---DCKDYINL 161 (419)
Q Consensus 99 ~--~~~~~l~~~~~~~~~i~iwd~~~~----~~~~-~~------~-~~~~~~~~~~~~~~~~l~~~~~~---~~~g~v~i 161 (419)
+ +++++|++.+...+.|.++|+.+. +... +. . .......+..+|+| .++++..+ ++.|.|.+
T Consensus 90 ~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~v 168 (462)
T 2ece_A 90 KPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILM 168 (462)
T ss_dssp CTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEE
T ss_pred CCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEE
Confidence 7 889999998876669999999754 4444 31 1 11234677889999 55554443 22368999
Q ss_pred EeccCCeEEEEEeccccc---eeeeeECCCCCeEEEEcC-----------------CCCceEEEEcC-CCceEEEEeecC
Q 014755 162 LSCHTWEIMGVFAVDTLD---LADIEWSPDDSAIVIWDS-----------------PLEYKVLIYSP-DGRCLLKYQAYE 220 (419)
Q Consensus 162 ~d~~~~~~~~~~~~~~~~---v~~~~~~~~~~~l~~~~~-----------------~~~~~i~~~d~-~~~~~~~~~~~~ 220 (419)
+|.++++.+..+.....+ .+.+-|+|+++.+++.+- ....+|.+||+ +++.+.++....
T Consensus 169 lD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~ 248 (462)
T 2ece_A 169 LDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGE 248 (462)
T ss_dssp ECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCT
T ss_pred EECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCC
Confidence 999999999888743222 455788999998887431 13689999999 777777776532
Q ss_pred CCCceeEEEE--ccCCCeEEEEEe------cCcEEEEEcCCcee--eeeeccc-ccccCCCccceeccCCCcccccceee
Q 014755 221 SGLGVKSISW--SPCGQFLAVGSY------DQTLRVLNHLTWKT--FAEFMHL-STVRGPCFPAVFKEVDEPLQLDMSEL 289 (419)
Q Consensus 221 ~~~~v~~~~~--s~~~~~l~~~~~------d~~i~v~d~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (419)
.......+.| +|++++++++.. +++|.+|....++. .+.+..+ ..+..
T Consensus 249 ~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~--------------------- 307 (462)
T 2ece_A 249 ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEG--------------------- 307 (462)
T ss_dssp TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCS---------------------
T ss_pred CCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccc---------------------
Confidence 2224556666 999998888775 56888877654331 1111100 00000
Q ss_pred eccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCC--
Q 014755 290 CLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQ-- 367 (419)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~-- 367 (419)
.++... ..+.+-......+.+||||++|.++... .+.|.+||+...
T Consensus 308 -----------------------------~lp~~~--~~f~~~~~~pa~I~lS~DGrfLYVSnrg-~d~VavfdV~d~~~ 355 (462)
T 2ece_A 308 -----------------------------NLPEIL--KPFKAVPPLVTDIDISLDDKFLYLSLWG-IGEVRQYDISNPFK 355 (462)
T ss_dssp -----------------------------SCCGGG--GGGTEECCCCCCEEECTTSCEEEEEETT-TTEEEEEECSSTTS
T ss_pred -----------------------------cccccc--cccccCCCceeEEEECCCCCEEEEEeCC-CCEEEEEEecCCCC
Confidence 000000 0000001225678999999999988773 489999998633
Q ss_pred -CceeecccC---------------CCeeEEEeCCCCCeEEEEe
Q 014755 368 -EPAAILVQK---------------DPIRAATWDPTCTRLVLCT 395 (419)
Q Consensus 368 -~~~~~~~~~---------------~~v~~~~~s~~~~~l~s~~ 395 (419)
+++....-. +....++++|||++|+++.
T Consensus 356 ~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 356 PVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred cEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 233222211 1368899999999998887
No 228
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.54 E-value=1.6e-12 Score=112.23 Aligned_cols=298 Identities=14% Similarity=-0.000 Sum_probs=188.7
Q ss_pred eEEcCCCCEEEEEeCCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCc
Q 014755 13 SCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLA 91 (419)
Q Consensus 13 ~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~ 91 (419)
..+..+|.+.+...++.|..|| .+++...... +...+.++...++|. |.+++ . + +..+|. +++..........
T Consensus 25 ~~~d~~g~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t-~-~-l~~~d~-~g~~~~~~~~~~~ 98 (330)
T 3hxj_A 25 PILAKNGTIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGT-IYFGS-D-K-VYAINP-DGTEKWRFDTKKA 98 (330)
T ss_dssp CEECTTSCEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTE-ECCSS-C-E-EEEECC-CGGGGGGSCC---
T ss_pred ceEccCCeEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCc-EEEec-C-c-EEEECC-CCcEEEEEECCCC
Confidence 5566677654444478899999 8888765444 333456777777775 44444 3 4 888886 5655444332222
Q ss_pred cEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEE
Q 014755 92 GIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIM 170 (419)
Q Consensus 92 ~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~ 170 (419)
......+. +..+.+++.++ .+..+|.. ++... .......+.++...+++. +.+++.+ +.|..+|.. ++..
T Consensus 99 ~~~~~~~~--~~~l~v~t~~~-~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~---~~l~~~d~~-g~~~ 169 (330)
T 3hxj_A 99 IVSDFTIF--EDILYVTSMDG-HLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSND---NYLYAINPD-GTEK 169 (330)
T ss_dssp --CCEEEE--TTEEEEECTTS-EEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTT---SEEEEECTT-SCEE
T ss_pred cccCceEE--CCEEEEEecCC-EEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCC---CEEEEECCC-CCEe
Confidence 22233333 45577776666 89999998 65554 444444456777777776 4455543 689999998 8777
Q ss_pred EEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEE
Q 014755 171 GVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLN 250 (419)
Q Consensus 171 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d 250 (419)
..+......+.++...+++..++. + +.+..+|.+++.+........ .+.++..+++|. |..++.++.|..+|
T Consensus 170 ~~~~~~~~~~~~~~~d~~g~l~v~---t--~~l~~~d~~g~~~~~~~~~~~--~~~~~~~~~~g~-l~v~t~~~gl~~~~ 241 (330)
T 3hxj_A 170 WRFKTNDAITSAASIGKDGTIYFG---S--DKVYAINPDGTEKWNFYAGYW--TVTRPAISEDGT-IYVTSLDGHLYAIN 241 (330)
T ss_dssp EEEECSSCCCSCCEECTTCCEEEE---S--SSEEEECTTSCEEEEECCSSC--CCSCCEECTTSC-EEEEETTTEEEEEC
T ss_pred EEEecCCCceeeeEEcCCCEEEEE---e--CEEEEECCCCcEEEEEccCCc--ceeceEECCCCe-EEEEcCCCeEEEEC
Confidence 777666666777888788875554 3 789999987777666654433 688888888874 55566677888887
Q ss_pred cCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCC
Q 014755 251 HLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKP 330 (419)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (419)
. +++.+..+.....
T Consensus 242 ~-~g~~~~~~~~~~~----------------------------------------------------------------- 255 (330)
T 3hxj_A 242 P-DGTEKWRFKTGKR----------------------------------------------------------------- 255 (330)
T ss_dssp T-TSCEEEEEECSSC-----------------------------------------------------------------
T ss_pred C-CCCEeEEeeCCCC-----------------------------------------------------------------
Confidence 4 4544443321110
Q ss_pred CCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc-cCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCC
Q 014755 331 NPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV-QKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGA 408 (419)
Q Consensus 331 ~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~ 408 (419)
.+..+.+.+++. |..++.+ +.|..+|. +++...... ....+.++...++|+ |..++.+|.+++...+..
T Consensus 256 ----~~~~~~~~~~g~-l~v~t~~--ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 256 ----IESSPVIGNTDT-IYFGSYD--GHLYAINP-DGTEKWNFETGSWIIATPVIDENGT-IYFGTRNGKFYALFNLEH 325 (330)
T ss_dssp ----CCSCCEECTTSC-EEEECTT--CEEEEECT-TSCEEEEEECSSCCCSCCEECTTCC-EEEECTTSCEEEEEC---
T ss_pred ----ccccceEcCCCe-EEEecCC--CCEEEECC-CCcEEEEEEcCCccccceEEcCCCE-EEEEcCCCeEEEEecccc
Confidence 011234455665 4556665 88999996 666665554 455677888888887 455888999998877643
No 229
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.54 E-value=6e-11 Score=104.31 Aligned_cols=294 Identities=10% Similarity=-0.005 Sum_probs=180.1
Q ss_pred CCCEEEEEe-CCeEEEEecCCCcEEEEeec----------CcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeee
Q 014755 18 NARYIAVAV-DYRLVVRDAHSFKVVQLFSC----------LDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKI 86 (419)
Q Consensus 18 d~~~la~~~-~~~i~i~~~~~~~~~~~~~~----------~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~ 86 (419)
++..|.+++ ++.|..+|.++++.+..... ...+.+. ...++..+++++.+ +.|..+|.++++.+...
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~-g~l~a~d~~tG~~~W~~ 129 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEK-AQVYALNTSDGTVAWQT 129 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETT-SEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCC-CEEEEEECCCCCEEEEE
Confidence 355666666 77899999999998765543 2223222 22245567777765 89999999999877665
Q ss_pred ecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCe------eeEEEccCCCEEEEEeecCCCCeEE
Q 014755 87 DEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHAS------KGVAFTQDGKFAAICTRRDCKDYIN 160 (419)
Q Consensus 87 ~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~g~v~ 160 (419)
............ .+..+++++.++ .|..+|.++|+.+......... ...... +..++++..+ +.+.
T Consensus 130 ~~~~~~~~~p~~--~~~~v~v~~~~g-~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~---g~l~ 201 (376)
T 3q7m_A 130 KVAGEALSRPVV--SDGLVLIHTSNG-QLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDN---GRVS 201 (376)
T ss_dssp ECSSCCCSCCEE--ETTEEEEECTTS-EEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTT---TEEE
T ss_pred eCCCceEcCCEE--ECCEEEEEcCCC-eEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCC---CEEE
Confidence 443322112222 234677777666 9999999998877622222221 222222 3456666554 7999
Q ss_pred EEeccCCeEEEEEeccccc-------eeeeeECC--CCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEE
Q 014755 161 LLSCHTWEIMGVFAVDTLD-------LADIEWSP--DDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISW 230 (419)
Q Consensus 161 i~d~~~~~~~~~~~~~~~~-------v~~~~~~~--~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~ 230 (419)
.+|..+++.+-........ +..+.-.| .+..+++ +..++.+..+|. +|+.+...... ....+..
T Consensus 202 ~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~--~~~~g~l~~~d~~tG~~~w~~~~~----~~~~~~~ 275 (376)
T 3q7m_A 202 AVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFA--LAYNGNLTALDLRSGQIMWKRELG----SVNDFIV 275 (376)
T ss_dssp EEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEE--ECTTSCEEEEETTTCCEEEEECCC----CEEEEEE
T ss_pred EEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEE--EecCcEEEEEECCCCcEEeeccCC----CCCCceE
Confidence 9999999887665532110 00011111 2345555 355789999999 88877655421 2444444
Q ss_pred ccCCCeEEEEEecCcEEEEEcCCceeeeeecc-cccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEE
Q 014755 231 SPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMH-LSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKV 309 (419)
Q Consensus 231 s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (419)
++..++.++.++.|..+|..+++.+..... ....
T Consensus 276 --~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~------------------------------------------- 310 (376)
T 3q7m_A 276 --DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRL------------------------------------------- 310 (376)
T ss_dssp --ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSC-------------------------------------------
T ss_pred --ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCc-------------------------------------------
Confidence 356788888899999999999887655431 0000
Q ss_pred EEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeeccc-CCCeeE-EEeCCC
Q 014755 310 RYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILVQ-KDPIRA-ATWDPT 387 (419)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~~-~~~v~~-~~~s~~ 387 (419)
+..+.. .+..|+.++.+ |.|+++|..+++++..... ...+.. +.. .
T Consensus 311 --------------------------~~~~~~--~~~~l~v~~~~--g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~--~ 358 (376)
T 3q7m_A 311 --------------------------LTSPVL--YNGNLVVGDSE--GYLHWINVEDGRFVAQQKVDSSGFQTEPVA--A 358 (376)
T ss_dssp --------------------------CCCCEE--ETTEEEEECTT--SEEEEEETTTCCEEEEEECCTTCBCSCCEE--E
T ss_pred --------------------------ccCCEE--ECCEEEEEeCC--CeEEEEECCCCcEEEEEecCCCcceeCCEE--E
Confidence 011111 23466777777 9999999999998766542 333332 222 2
Q ss_pred CCeEEEEeCCCcEEEee
Q 014755 388 CTRLVLCTGSSHLYMWT 404 (419)
Q Consensus 388 ~~~l~s~~~dg~i~vw~ 404 (419)
+..|+.++.+|.|..|+
T Consensus 359 ~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 359 DGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp TTEEEEEBTTSCEEEEE
T ss_pred CCEEEEEeCCCEEEEEe
Confidence 45677788999999886
No 230
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.52 E-value=1.8e-10 Score=96.00 Aligned_cols=191 Identities=12% Similarity=-0.019 Sum_probs=128.3
Q ss_pred CCeEEEEeccCCeEEEEEccCCcce-----eeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEe-ccCC
Q 014755 59 SEYILCGLYKRLMIQAWSLTQPEWT-----CKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHV-QSPK 132 (419)
Q Consensus 59 ~~~l~~~~~~~g~i~iw~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~-~~~~ 132 (419)
|++|+.+.. +.|+.++++..... ..+......+..++|++++..|+.+....+.|..+++.++....+ ....
T Consensus 1 ~~~l~~~~~--~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~ 78 (267)
T 1npe_A 1 GTHLLFAQT--GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDL 78 (267)
T ss_dssp CEEEEEEEE--EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTC
T ss_pred CcEEEEEcC--CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCC
Confidence 456666653 57999998765421 112222345789999998888888776556999999987654443 2223
Q ss_pred CCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCC-CceEEEEcCCCc
Q 014755 133 HASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPL-EYKVLIYSPDGR 211 (419)
Q Consensus 133 ~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~~~i~~~d~~~~ 211 (419)
.....+++++++..|+++... .+.|.+++++.................++++|++..+++.+... .+.|..+++++.
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~--~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~ 156 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQ--LDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT 156 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETT--TTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC
T ss_pred CCccEEEEEecCCeEEEEECC--CCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC
Confidence 467899999988777776643 36899999875332222222224578999999888777765442 478999998776
Q ss_pred eEEEEeecCCCCceeEEEEccCCCeEEEEE-ecCcEEEEEcCCc
Q 014755 212 CLLKYQAYESGLGVKSISWSPCGQFLAVGS-YDQTLRVLNHLTW 254 (419)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~v~d~~~~ 254 (419)
....+... .......++++|++..|+.+. ..+.|.++|....
T Consensus 157 ~~~~~~~~-~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~ 199 (267)
T 1npe_A 157 NRRILAQD-NLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP 199 (267)
T ss_dssp CCEEEECT-TCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE
T ss_pred CcEEEEEC-CCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC
Confidence 55544321 222688999999877666554 4578999998653
No 231
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.52 E-value=7.7e-14 Score=124.87 Aligned_cols=214 Identities=11% Similarity=0.111 Sum_probs=152.1
Q ss_pred eEEcC-----CCCEEEEEe--CCeEEEEecCCCcEEEEee--cCcceeEEEE-e-cCCCeEEEEe---------------
Q 014755 13 SCFSP-----NARYIAVAV--DYRLVVRDAHSFKVVQLFS--CLDKISYIEW-A-LDSEYILCGL--------------- 66 (419)
Q Consensus 13 ~~~s~-----d~~~la~~~--~~~i~i~~~~~~~~~~~~~--~~~~v~~~~~-s-~~~~~l~~~~--------------- 66 (419)
..+|. ||++|.+.. +++|.+.|+.+.++.+.+. .......+++ + |+++++++++
T Consensus 90 ~~~s~t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~ 169 (595)
T 1fwx_A 90 VHMSFTEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMED 169 (595)
T ss_dssp EEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTC
T ss_pred cccCCCCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCccccc
Confidence 55665 999999986 5669999999999888443 4456889998 5 9999999884
Q ss_pred --ccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCC--------------eEEEEEcCCCeEEEecc
Q 014755 67 --YKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQL--------------RLTVWSLLNTACVHVQS 130 (419)
Q Consensus 67 --~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~--------------~i~iwd~~~~~~~~~~~ 130 (419)
..++.+.+.|.++.+...++.-.. ....++++|+|+++++++.+.. .+.+.|....+
T Consensus 170 ~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~------ 242 (595)
T 1fwx_A 170 VANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIE------ 242 (595)
T ss_dssp GGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHH------
T ss_pred ccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeecccee------
Confidence 334689999999988877776433 4577889999999999986541 34444433211
Q ss_pred CCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC--CeE-EEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEc
Q 014755 131 PKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT--WEI-MGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYS 207 (419)
Q Consensus 131 ~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~--~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d 207 (419)
.+.++|++... +.|.+.|.++ ++. +..+.. .....++.++|||+++++.+ .....|.++|
T Consensus 243 --------~~v~~Gk~~~i-------~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~-~~s~~VsVid 305 (595)
T 1fwx_A 243 --------KAIAAGDYQEL-------NGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAG-KLSPTVTVLD 305 (595)
T ss_dssp --------HHHHHTCSEEE-------TTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEEC-TTSSBEEEEE
T ss_pred --------EeccCCCeeEE-------CcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeC-CCCCeEEEEE
Confidence 13345554443 2599999998 544 444443 34678999999999999865 4478999999
Q ss_pred CC-Cc------------eEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCC
Q 014755 208 PD-GR------------CLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLT 253 (419)
Q Consensus 208 ~~-~~------------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~ 253 (419)
.. .+ ....... ......++|+|+|...++.--|++|.+||+.+
T Consensus 306 ~~~~~~~~~~~l~~~~~v~~~v~v---G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 306 VTRFDAVFYENADPRSAVVAEPEL---GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp GGGHHHHHHSCCCGGGGEEECCBC---CSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred CcccccccccccCcccceEEEcCC---CCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 94 21 2222222 22689999999994334455689999999876
No 232
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.51 E-value=5.7e-12 Score=118.67 Aligned_cols=309 Identities=10% Similarity=0.018 Sum_probs=185.5
Q ss_pred CCeEEEEeccCCeEEEEEccCCcceeeeecCCcc-----------EeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE
Q 014755 59 SEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAG-----------IAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH 127 (419)
Q Consensus 59 ~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~ 127 (419)
+..+++++.+ +.|.-+|..+|+.+.+....... ...++. ++..+++++.++ .|..+|.++|+.+.
T Consensus 77 ~g~vyv~~~~-~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg-~l~alD~~tG~~~W 152 (677)
T 1kb0_A 77 DGIMYVSASW-SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDG-RLIALDAATGKEVW 152 (677)
T ss_dssp TTEEEEECGG-GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTS-EEEEEETTTCCEEE
T ss_pred CCEEEEECCC-CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCC-EEEEEECCCCCEEe
Confidence 4566666655 78999999999887666433210 012222 456788887776 99999999998876
Q ss_pred -eccC-C----CCee-eEEEccCCCEEEEEeecC---CCCeEEEEeccCCeEEEEEeccccc------------------
Q 014755 128 -VQSP-K----HASK-GVAFTQDGKFAAICTRRD---CKDYINLLSCHTWEIMGVFAVDTLD------------------ 179 (419)
Q Consensus 128 -~~~~-~----~~~~-~~~~~~~~~~l~~~~~~~---~~g~v~i~d~~~~~~~~~~~~~~~~------------------ 179 (419)
.... . ..+. .... .+..++++.... .++.|+.+|.++++.+-.+......
T Consensus 153 ~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~ 230 (677)
T 1kb0_A 153 HQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWD 230 (677)
T ss_dssp EEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSC
T ss_pred eecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccccccccccccccc
Confidence 3332 1 1221 1112 234555554311 1379999999999988776542211
Q ss_pred --------------eeeeeECCCCCeEEEEcCCC-------------C----ceEEEEcC-CCceEEEEeecCCC-----
Q 014755 180 --------------LADIEWSPDDSAIVIWDSPL-------------E----YKVLIYSP-DGRCLLKYQAYESG----- 222 (419)
Q Consensus 180 --------------v~~~~~~~~~~~l~~~~~~~-------------~----~~i~~~d~-~~~~~~~~~~~~~~----- 222 (419)
...+++.|++..+++..... + +.|..+|. +|+.+..++...+.
T Consensus 231 ~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~ 310 (677)
T 1kb0_A 231 PSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYT 310 (677)
T ss_dssp GGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCC
T ss_pred ccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccc
Confidence 12467888888888743221 0 25999999 89988887653321
Q ss_pred --CceeEEEEccCC---CeEEEEEecCcEEEEEcCCceeeeeecccc-c-ccC--CCccceeccCCCcccccceeeeccC
Q 014755 223 --LGVKSISWSPCG---QFLAVGSYDQTLRVLNHLTWKTFAEFMHLS-T-VRG--PCFPAVFKEVDEPLQLDMSELCLND 293 (419)
Q Consensus 223 --~~v~~~~~s~~~---~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~-~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (419)
....-+....+| +.++.++.+|.++++|..+|+.+..+.... . ... ..+...+.+...+.+. ..+...
T Consensus 311 ~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~--~~~~~P- 387 (677)
T 1kb0_A 311 STQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSK--PQDAVP- 387 (677)
T ss_dssp CCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTS--CEECSS-
T ss_pred cCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCC--ccEECc-
Confidence 122223334477 688899999999999999999987765111 0 000 0000000000000000 000000
Q ss_pred ccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCC-------------------
Q 014755 294 DFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDS------------------- 354 (419)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d------------------- 354 (419)
...+...+ ..++++|++.++++...+
T Consensus 388 ----------------------------------~~~G~~~w-~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~ 432 (677)
T 1kb0_A 388 ----------------------------------GPYGAHNW-HPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPG 432 (677)
T ss_dssp ----------------------------------CTTCSSCS-SCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTT
T ss_pred ----------------------------------CcccccCC-CCceEcCCCCEEEEeChhcceeeeccccccccccccc
Confidence 00001111 235666665555443210
Q ss_pred ----------------------CCceEEEeeccCCCceeecccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEE
Q 014755 355 ----------------------MPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCV 411 (419)
Q Consensus 355 ----------------------~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~ 411 (419)
..+.|..||+.+++.+....+..++....++.++..++.++.||.+++||..+++++
T Consensus 433 ~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~l 511 (677)
T 1kb0_A 433 KPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKL 511 (677)
T ss_dssp STTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred ccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCcee
Confidence 117899999999999888777777777777778888888999999999999988775
No 233
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.50 E-value=5.3e-11 Score=103.04 Aligned_cols=224 Identities=13% Similarity=0.060 Sum_probs=154.4
Q ss_pred EEc--CCCCEEEEEe--CCeEEEEecCCC----cEEEEee--------cCcceeEEEEecCCCeEEEEecc-----CCeE
Q 014755 14 CFS--PNARYIAVAV--DYRLVVRDAHSF----KVVQLFS--------CLDKISYIEWALDSEYILCGLYK-----RLMI 72 (419)
Q Consensus 14 ~~s--~d~~~la~~~--~~~i~i~~~~~~----~~~~~~~--------~~~~v~~~~~s~~~~~l~~~~~~-----~g~i 72 (419)
.++ +++++|++.+ +++|.++|+.+. ++.+.+. ....-..+..+|+| .++++..+ .|.|
T Consensus 88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI 166 (462)
T ss_dssp TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred ccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Confidence 347 8999999987 678999999765 5666662 12356778899999 66655433 2589
Q ss_pred EEEEccCCcceeeeecCCcc---EeEEEECCCCCEEEEEe------------------cCCCeEEEEEcCCCeEEE-ecc
Q 014755 73 QAWSLTQPEWTCKIDEGLAG---IAYARWSPDSRHILTTS------------------DFQLRLTVWSLLNTACVH-VQS 130 (419)
Q Consensus 73 ~iw~~~~~~~~~~~~~~~~~---v~~~~~~~~~~~l~~~~------------------~~~~~i~iwd~~~~~~~~-~~~ 130 (419)
.++|.++.+.+.++.....+ -..+.|+|+++.+++.. ..+.+|.+||+.+++... +..
T Consensus 167 ~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v 246 (462)
T 2ece_A 167 LMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL 246 (462)
T ss_dssp EEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES
T ss_pred EEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEec
Confidence 99999999988887633222 34588899999888874 223499999999987766 433
Q ss_pred C-C-CCeeeEEE--ccCCCEEEEEee-----cCCCCeEEEEeccCCeE--EEEE--ecc----------------cccee
Q 014755 131 P-K-HASKGVAF--TQDGKFAAICTR-----RDCKDYINLLSCHTWEI--MGVF--AVD----------------TLDLA 181 (419)
Q Consensus 131 ~-~-~~~~~~~~--~~~~~~l~~~~~-----~~~~g~v~i~d~~~~~~--~~~~--~~~----------------~~~v~ 181 (419)
. . .....+.| +|++++++++.. . .++|.+|..+.++. .+.+ ... .....
T Consensus 247 g~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~L--ss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa 324 (462)
T 2ece_A 247 GEENRMALELRPLHDPTKLMGFINMVVSLKDL--SSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVT 324 (462)
T ss_dssp CTTEEEEEEEEECSSTTCCEEEEEEEEETTTC--CEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCC
T ss_pred CCCCCccceeEeeECCCCCEEEEEEeeeccCC--CceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCcee
Confidence 2 1 23355655 999999998886 4 25787766654432 1211 110 13467
Q ss_pred eeeECCCCCeEEEEcCCCCceEEEEcC-C---CceEEEEeecCC------------CCceeEEEEccCCCeEEEEE
Q 014755 182 DIEWSPDDSAIVIWDSPLEYKVLIYSP-D---GRCLLKYQAYES------------GLGVKSISWSPCGQFLAVGS 241 (419)
Q Consensus 182 ~~~~~~~~~~l~~~~~~~~~~i~~~d~-~---~~~~~~~~~~~~------------~~~v~~~~~s~~~~~l~~~~ 241 (419)
.+.++|||++|.+.+.. .+.|.+||+ + .+.+..+..... ......++++|||++|+++.
T Consensus 325 ~I~lS~DGrfLYVSnrg-~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 325 DIDISLDDKFLYLSLWG-IGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CEEECTTSCEEEEEETT-TTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEEECCCCCEEEEEeCC-CCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 89999999999987644 689999998 2 244444433211 01368899999999999887
No 234
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.50 E-value=1.4e-12 Score=112.69 Aligned_cols=173 Identities=9% Similarity=0.008 Sum_probs=126.6
Q ss_pred ceeEEEEecCCCeEEEEeccCCeEEEEEccCCc---------c-eeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEE
Q 014755 49 KISYIEWALDSEYILCGLYKRLMIQAWSLTQPE---------W-TCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVW 118 (419)
Q Consensus 49 ~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~---------~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iw 118 (419)
++..+++++...++++|+.+ .+.+|++++.+ . ......+.. |+.++| |++.|+++ .++ .|++|
T Consensus 39 ~~nlLais~~~gll~a~~~~--~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~-~l~v~ 111 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS--KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRN-ALYSL 111 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT--EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESS-EEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC--EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCC-cEEEE
Confidence 68999999999999999865 68889976443 1 112234556 999999 99999998 555 99999
Q ss_pred EcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcC
Q 014755 119 SLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDS 197 (419)
Q Consensus 119 d~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 197 (419)
|+.+..... ...+...+.++.+.+. .++++..+ |.|.+||+.+++... +...|.+++|+|+| +++ +
T Consensus 112 dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~d---G~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~v--g 178 (388)
T 1xip_A 112 DLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSV---NDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAV--L 178 (388)
T ss_dssp ESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETT---SEEEEEETTTCCEEE----EEESEEEEEECSSE--EEE--E
T ss_pred EchhhhccCccceeecceeeEEecCC--CEEEEECC---CCEEEEEccCCcccc----ccCCceEEEEcCCc--eEE--E
Confidence 998643222 4455666777776654 37777766 899999999877653 34689999999999 444 4
Q ss_pred CCCceEEEEcCCCce---EEEEee----c---CCCCceeEEEEccCCCeEEEEE
Q 014755 198 PLEYKVLIYSPDGRC---LLKYQA----Y---ESGLGVKSISWSPCGQFLAVGS 241 (419)
Q Consensus 198 ~~~~~i~~~d~~~~~---~~~~~~----~---~~~~~v~~~~~s~~~~~l~~~~ 241 (419)
..+|++++|+.++.. .+.+.. . .+...|.++.|.++++++++-.
T Consensus 179 ~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 179 LKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred EcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 568999999985555 445521 1 1334899999999999888643
No 235
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.49 E-value=1.3e-11 Score=116.47 Aligned_cols=316 Identities=10% Similarity=0.028 Sum_probs=182.4
Q ss_pred CCeEEEEeccCCeEEEEEccCCcceeeeecCCcc----------E-eEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE
Q 014755 59 SEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAG----------I-AYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH 127 (419)
Q Consensus 59 ~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~ 127 (419)
+..+++++.+ +.|.-+|..+|+.+.+....... + ..+.. .+..+++++.++ .|..+|.++|+.+.
T Consensus 70 ~g~vyv~~~~-~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg-~l~AlDa~TG~~~W 145 (689)
T 1yiq_A 70 DGVMYTTGPF-SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDG-RLEAIDAKTGQRAW 145 (689)
T ss_dssp TTEEEEECGG-GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTS-EEEEEETTTCCEEE
T ss_pred CCEEEEEcCC-CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCC-EEEEEECCCCCEee
Confidence 5567777666 78999999999987776433211 0 11222 356788887776 99999999998876
Q ss_pred -eccC--CCCeeeEEEcc---CCCEEEEEeec---CCCCeEEEEeccCCeEEEEEeccc---------------------
Q 014755 128 -VQSP--KHASKGVAFTQ---DGKFAAICTRR---DCKDYINLLSCHTWEIMGVFAVDT--------------------- 177 (419)
Q Consensus 128 -~~~~--~~~~~~~~~~~---~~~~l~~~~~~---~~~g~v~i~d~~~~~~~~~~~~~~--------------------- 177 (419)
.... ......+..+| ++ .++++... ..++.|+.||.++|+.+-.+....
T Consensus 146 ~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g 224 (689)
T 1yiq_A 146 SVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFG 224 (689)
T ss_dssp EEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCS
T ss_pred eecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCC
Confidence 3221 11111111112 44 44444321 123799999999999877664210
Q ss_pred ----------cceeeeeECCCCCeEEEEcCCCCc-------------------eEEEEcC-CCceEEEEeecCCC-----
Q 014755 178 ----------LDLADIEWSPDDSAIVIWDSPLEY-------------------KVLIYSP-DGRCLLKYQAYESG----- 222 (419)
Q Consensus 178 ----------~~v~~~~~~~~~~~l~~~~~~~~~-------------------~i~~~d~-~~~~~~~~~~~~~~----- 222 (419)
.....+++.|++..+++. ..++ .|..+|. +|+.+-.++...+.
T Consensus 225 ~~w~~~~~g~~~w~~~~~d~~~~~vy~~--~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~ 302 (689)
T 1yiq_A 225 DAYVEQGGGGTAWDSFAYDPELNLLYIG--VGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYT 302 (689)
T ss_dssp STHHHHCEECCCCSCEEEETTTTEEEEE--CCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCC
T ss_pred ceeeecCCCCccccceeEcCCCCEEEEe--CCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCccccccc
Confidence 001256788888888873 3343 4999999 89988877653221
Q ss_pred --CceeEEEEccCCC---eEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCcccc
Q 014755 223 --LGVKSISWSPCGQ---FLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQ 297 (419)
Q Consensus 223 --~~v~~~~~s~~~~---~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (419)
..+.-.....+|+ .++.++.+|.++++|..+|+.+....... + .|.....+ ....-+... . ..
T Consensus 303 ~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~-~-------~w~~~~~~--~~~~pi~~~-~-~~ 370 (689)
T 1yiq_A 303 ATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVP-Q-------SWTKGMDM--KTGRPILDE-E-NA 370 (689)
T ss_dssp CCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSC-C-------SSEEEEET--TTTEEEECH-H-HH
T ss_pred CCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccc-c-------ccccccCc--cCCCcccch-h-hc
Confidence 1122222233565 78889999999999999999886654111 0 00000000 000000000 0 00
Q ss_pred ccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCC-----------------------
Q 014755 298 GNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDS----------------------- 354 (419)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d----------------------- 354 (419)
..+ ..+... .+... ..+.. .-..++|+|+..++++...+
T Consensus 371 ~~~--~~~~~~---~~~p~------------~~Gg~-~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (689)
T 1yiq_A 371 AYW--KNGKRN---LVTPA------------FWGAH-DWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQL 432 (689)
T ss_dssp CTT--TSSSCE---EESSC------------TTCSS-CSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCC
T ss_pred ccc--CCCCee---EeCCC------------ccccc-CCCcceECCCCCEEEEeccccceeeeecccccccccccccccc
Confidence 000 000000 00000 00000 01236777776666554210
Q ss_pred --------------------CCceEEEeeccCCCceeecccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEE
Q 014755 355 --------------------MPTTLWIWDICRQEPAAILVQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCV 411 (419)
Q Consensus 355 --------------------~~~~i~iwd~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~ 411 (419)
.+|.|+.||+.+++.+....+..++..-.++..+.+++.++.||.++.||.++|+++
T Consensus 433 g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~l 509 (689)
T 1yiq_A 433 GLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKL 509 (689)
T ss_dssp SSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccc
Confidence 027899999999999887766565655566777888999999999999999988876
No 236
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.47 E-value=9e-12 Score=107.90 Aligned_cols=232 Identities=8% Similarity=-0.018 Sum_probs=149.8
Q ss_pred CeEEcCCCCEEEEEe---CCeEEEEecCCCcEEEEe-------ecCcceeEEEEecCCCeEEEEecc----CCeEEEEEc
Q 014755 12 PSCFSPNARYIAVAV---DYRLVVRDAHSFKVVQLF-------SCLDKISYIEWALDSEYILCGLYK----RLMIQAWSL 77 (419)
Q Consensus 12 ~~~~s~d~~~la~~~---~~~i~i~~~~~~~~~~~~-------~~~~~v~~~~~s~~~~~l~~~~~~----~g~i~iw~~ 77 (419)
.++++|+|+++++.. ++.+.||.+.++++...- .+...+..++++++|+++++-... .+.|.+||+
T Consensus 21 ~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~ 100 (343)
T 2qe8_A 21 NITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDT 100 (343)
T ss_dssp EEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEET
T ss_pred eEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEEC
Confidence 389999999988864 332445544455543211 134679999999999866665431 258999999
Q ss_pred cCCcceeeeecC------CccEeEEEECCCCCEEEEEec---CCCeEEEEEcCCCeEEE-eccC----------------
Q 014755 78 TQPEWTCKIDEG------LAGIAYARWSPDSRHILTTSD---FQLRLTVWSLLNTACVH-VQSP---------------- 131 (419)
Q Consensus 78 ~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~---~~~~i~iwd~~~~~~~~-~~~~---------------- 131 (419)
.+++.+..+... ...+..+++++++..++.+.. ..+.|.+||+.+++..+ +..+
T Consensus 101 ~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~ 180 (343)
T 2qe8_A 101 LNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVP 180 (343)
T ss_dssp TTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEE
T ss_pred CCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEE
Confidence 998866655432 234688999987656655543 33489999999877666 3221
Q ss_pred -------------CCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC---Ce-----EEE--EEeccccceeeeeECCC
Q 014755 132 -------------KHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT---WE-----IMG--VFAVDTLDLADIEWSPD 188 (419)
Q Consensus 132 -------------~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~---~~-----~~~--~~~~~~~~v~~~~~~~~ 188 (419)
...+..++|+|+++.|+++...+ ..++.++... +. ... ...++......++++++
T Consensus 181 ~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~ 258 (343)
T 2qe8_A 181 VQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHS--TSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKD 258 (343)
T ss_dssp CBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSC--SEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTT
T ss_pred EEeccCCCceeceecccceeEeccCCCEEEEEeCCC--CeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCC
Confidence 01347899999999998887652 3666665421 10 000 11122345678999999
Q ss_pred CCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEE
Q 014755 189 DSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRV 248 (419)
Q Consensus 189 ~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v 248 (419)
|..++. ...++.|.+||. +|+........ ....+.+++|.++++++++.+..+.+.+
T Consensus 259 G~l~va--~~~~~~V~~~d~~~G~~~~~~~~~-~~~~p~~va~~~~g~l~v~~~~~~~~~~ 316 (343)
T 2qe8_A 259 HNIYVG--DLAHSAIGVITSADRAYKLLVTDE-KLSWTDSFNFGSDGYLYFDCNQLHHSAP 316 (343)
T ss_dssp CCEEEE--EGGGTEEEEEETTTTEEEEEEECG-GGSCEEEEEECTTSCEEEEECCGGGSGG
T ss_pred CCEEEE--ccCCCeEEEEECCCCCEEEEEECC-ceecCCeeEECCCCcEEEEeCccccccc
Confidence 976665 345789999999 77644333321 2236899999999887777765544433
No 237
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.42 E-value=4.6e-15 Score=129.62 Aligned_cols=186 Identities=9% Similarity=-0.006 Sum_probs=103.1
Q ss_pred CCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCC-Ce
Q 014755 58 DSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKH-AS 135 (419)
Q Consensus 58 ~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~-~~ 135 (419)
++..+++++.+ |.|+.||..+|+.+.++.. ..+.+..+..++..+++++.++ .|+.||.++|+.+. ...+.. .+
T Consensus 8 ~~~~v~~gs~d-g~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg-~l~a~d~~tG~~~w~~~~~~~~~~ 83 (369)
T 2hz6_A 8 PETLLFVSTLD-GSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDG-SLYTLGSKNNEGLTKLPFTIPELV 83 (369)
T ss_dssp CTTEEEEEETT-SEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTC-CEEEC-----CCSEECSCCHHHHH
T ss_pred eCCEEEEEcCC-CEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCC-EEEEEECCCCceeeeeeccCcccc
Confidence 57788888876 8999999999998877765 4555555566777777766766 99999998877643 221111 01
Q ss_pred -eeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceE
Q 014755 136 -KGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCL 213 (419)
Q Consensus 136 -~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~ 213 (419)
....+. ++..+++++.+ +.++.||.++|+.+..+..+. ...++|++..+++ ++.++.|+.||. +|+.+
T Consensus 84 ~~sp~~~-~~~~v~~g~~d---g~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~--~~~dg~v~a~d~~tG~~~ 153 (369)
T 2hz6_A 84 QASPCRS-SDGILYMGKKQ---DIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYL--GRTEYTITMYDTKTRELR 153 (369)
T ss_dssp TTCSCC------CCCCEEE---EEEEEECCC--------------------------EEE--EEEEEEEECCCSSSSSCC
T ss_pred ccCceEe-cCCEEEEEeCC---CEEEEEECCCCcEEEEecCCC----cccccccCCEEEE--EecCCEEEEEECCCCCEE
Confidence 111111 34456666665 799999999999877766543 2345677777777 456789999999 88876
Q ss_pred EEEeecCCCCceeEEEEccCC---CeEEEEEecCcEEEEEcCCceeeeeec
Q 014755 214 LKYQAYESGLGVKSISWSPCG---QFLAVGSYDQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 214 ~~~~~~~~~~~v~~~~~s~~~---~~l~~~~~d~~i~v~d~~~~~~~~~~~ 261 (419)
..+.... ....+++++. ..+++++.+|.|+.||..+|+.+..+.
T Consensus 154 W~~~~~~----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 154 WNATYFD----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp CEEEEEE----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE
T ss_pred EeEeccc----ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec
Confidence 6554321 2233344432 567788889999999999988766654
No 238
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.41 E-value=4.5e-09 Score=89.58 Aligned_cols=239 Identities=10% Similarity=-0.050 Sum_probs=162.4
Q ss_pred CEEEEEeCCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccC---Ccceee-eecCCccEeE
Q 014755 20 RYIAVAVDYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQ---PEWTCK-IDEGLAGIAY 95 (419)
Q Consensus 20 ~~la~~~~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~---~~~~~~-~~~~~~~v~~ 95 (419)
.+|+++....|+..|+.+.+..........+..++|++++..|+.+....+.|..+++.+ +..... +.........
T Consensus 2 ~~ll~~~~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 81 (316)
T 1ijq_A 2 AYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 81 (316)
T ss_dssp CEEEEECBSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred CEEEEECCCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCE
Confidence 367778778899999998887777766677899999998877777766567999999876 122222 3223345678
Q ss_pred EEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEe
Q 014755 96 ARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFA 174 (419)
Q Consensus 96 ~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~ 174 (419)
+++.+.+..|+.+....+.|.+.++....... +.........++++|.+..|+.+... ..+.|..++++.........
T Consensus 82 lavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~-~~~~I~~~~~dG~~~~~~~~ 160 (316)
T 1ijq_A 82 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGVDIYSLVT 160 (316)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECS-SSCEEEEEETTSCCEEEEEC
T ss_pred EEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccC-CCCeEEEEcCCCCCeEEEEE
Confidence 99988777777775544599999998765444 33334566899999987777766542 12688888886433222222
Q ss_pred ccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeec-CCCCceeEEEEccCCCeEEEEEecCcEEEEEcCC
Q 014755 175 VDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAY-ESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLT 253 (419)
Q Consensus 175 ~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~ 253 (419)
..-.....++++|++..|++.+. ..+.|..+|++|...+.+... .......++++. .+..+++-...+.|..++..+
T Consensus 161 ~~~~~P~gla~d~~~~~lY~~D~-~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~ 238 (316)
T 1ijq_A 161 ENIQWPNGITLDLLSGRLYWVDS-KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLT 238 (316)
T ss_dssp SSCSCEEEEEEETTTTEEEEEET-TTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTT
T ss_pred CCCCCceEEEEeccCCEEEEEEC-CCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCC
Confidence 23356789999999998888774 467999999977655555332 122246788885 344555555667899999877
Q ss_pred ceeeeeec
Q 014755 254 WKTFAEFM 261 (419)
Q Consensus 254 ~~~~~~~~ 261 (419)
++.+..+.
T Consensus 239 g~~~~~i~ 246 (316)
T 1ijq_A 239 GSDVNLLA 246 (316)
T ss_dssp CCCCEEEE
T ss_pred CcceEEEe
Confidence 77665553
No 239
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.39 E-value=9.1e-10 Score=96.74 Aligned_cols=264 Identities=9% Similarity=0.008 Sum_probs=162.9
Q ss_pred CCeEEEEeccCCeEEEEEccCCcceeeeecCC---------ccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-e
Q 014755 59 SEYILCGLYKRLMIQAWSLTQPEWTCKIDEGL---------AGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-V 128 (419)
Q Consensus 59 ~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~ 128 (419)
+..+++++.+ +.|..+|.++++.+....... ..+... ...++..+++++.++ .|..+|.++|+... .
T Consensus 53 ~~~v~~~~~~-g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g-~l~a~d~~tG~~~W~~ 129 (376)
T 3q7m_A 53 DNVVYAADRA-GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKA-QVYALNTSDGTVAWQT 129 (376)
T ss_dssp TTEEEEECTT-SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTS-EEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCC-CeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCC-EEEEEECCCCCEEEEE
Confidence 5677777755 799999999998776554321 222221 122455677777776 99999999988765 3
Q ss_pred ccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccce-----eeeeECCCCCeEEEEcCCCCceE
Q 014755 129 QSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDL-----ADIEWSPDDSAIVIWDSPLEYKV 203 (419)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~~~~~~~~~~i 203 (419)
............. +..+++++.+ +.|..+|.++++.+-......... ...... +..+++ +..++.+
T Consensus 130 ~~~~~~~~~p~~~--~~~v~v~~~~---g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~--g~~~g~l 200 (376)
T 3q7m_A 130 KVAGEALSRPVVS--DGLVLIHTSN---GQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVV--GGDNGRV 200 (376)
T ss_dssp ECSSCCCSCCEEE--TTEEEEECTT---SEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEE--CCTTTEE
T ss_pred eCCCceEcCCEEE--CCEEEEEcCC---CeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEE--EcCCCEE
Confidence 3222212222222 3466666654 799999999998877665432211 122222 345555 5668899
Q ss_pred EEEcC-CCceEEEEeecCCCC-----ceeEEEEcc--CCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCcccee
Q 014755 204 LIYSP-DGRCLLKYQAYESGL-----GVKSISWSP--CGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVF 275 (419)
Q Consensus 204 ~~~d~-~~~~~~~~~~~~~~~-----~v~~~~~s~--~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (419)
..+|. +|+.+.......... .+..+...| .+..++.++.++.+..+|..+++.+......
T Consensus 201 ~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~------------ 268 (376)
T 3q7m_A 201 SAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELG------------ 268 (376)
T ss_dssp EEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCC------------
T ss_pred EEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCC------------
Confidence 99999 888877665332100 000011111 2457777888899999999988876554210
Q ss_pred ccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCC
Q 014755 276 KEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSM 355 (419)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~ 355 (419)
....+.. ++..++.++.+
T Consensus 269 -----------------------------------------------------------~~~~~~~--~~~~l~~~~~~- 286 (376)
T 3q7m_A 269 -----------------------------------------------------------SVNDFIV--DGNRIYLVDQN- 286 (376)
T ss_dssp -----------------------------------------------------------CEEEEEE--ETTEEEEEETT-
T ss_pred -----------------------------------------------------------CCCCceE--ECCEEEEEcCC-
Confidence 0122232 34456666666
Q ss_pred CceEEEeeccCCCceeecc--cCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEE
Q 014755 356 PTTLWIWDICRQEPAAILV--QKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCV 411 (419)
Q Consensus 356 ~~~i~iwd~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~ 411 (419)
+.|..+|..+++.+.... ....+..+.. .+..|+.++.+|.+.++|..+++.+
T Consensus 287 -g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~ 341 (376)
T 3q7m_A 287 -DRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFV 341 (376)
T ss_dssp -CCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEE
T ss_pred -CeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEE
Confidence 899999999998775543 1223333333 2457888889999999999988765
No 240
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.39 E-value=5.9e-10 Score=90.75 Aligned_cols=207 Identities=11% Similarity=0.001 Sum_probs=142.7
Q ss_pred CcEEEEeecCcc--eeEEEEecCCCeEEEEec-cCCeEEEEEccCCcceeeeecCCc-cEeEEEECCCCCEEEEEecCCC
Q 014755 38 FKVVQLFSCLDK--ISYIEWALDSEYILCGLY-KRLMIQAWSLTQPEWTCKIDEGLA-GIAYARWSPDSRHILTTSDFQL 113 (419)
Q Consensus 38 ~~~~~~~~~~~~--v~~~~~s~~~~~l~~~~~-~~g~i~iw~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~~~~ 113 (419)
.+.+..+.|... ...++|+||+.+.++.+. .++.|+++|+.+++.+..+.-... ....+++ ++..|+.+....+
T Consensus 9 ~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~--~g~~lyv~t~~~~ 86 (266)
T 2iwa_A 9 VEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTL--LNEKLYQVVWLKN 86 (266)
T ss_dssp EEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEETTCS
T ss_pred ceEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEE--eCCEEEEEEecCC
Confidence 456667777643 589999998744444432 246999999999998877653222 2233444 4667888876666
Q ss_pred eEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEecccc-----ceeeeeECC
Q 014755 114 RLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTL-----DLADIEWSP 187 (419)
Q Consensus 114 ~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~-----~v~~~~~~~ 187 (419)
.+.++|..+.+.+. +... ......+++|++.++++.. .+.|.++|..+.+.+..+..... .+..+.|.
T Consensus 87 ~v~viD~~t~~v~~~i~~g--~~~g~glt~Dg~~l~vs~g---s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~- 160 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFTHQ--MKDGWGLATDGKILYGSDG---TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI- 160 (266)
T ss_dssp EEEEEETTTTEEEEEEECC--SSSCCEEEECSSSEEEECS---SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred EEEEEECCCCcEEEEEECC--CCCeEEEEECCCEEEEECC---CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-
Confidence 99999999988877 4332 1223456678888887653 37999999999888887765321 35677887
Q ss_pred CCCeEEEEcCCCCceEEEEcC-CCceEEEEeecC-----------CCCceeEEEEccCCCeEE-EEEecCcEEEEEcCCc
Q 014755 188 DDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYE-----------SGLGVKSISWSPCGQFLA-VGSYDQTLRVLNHLTW 254 (419)
Q Consensus 188 ~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~-----------~~~~v~~~~~s~~~~~l~-~~~~d~~i~v~d~~~~ 254 (419)
+++ +.+. ....+.|.+.|+ +++.+..+.... .....+.++|+|+++.++ ++...+.+.+.++...
T Consensus 161 dg~-lyvn-~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 161 NGE-VWAN-IWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TTE-EEEE-ETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CCE-EEEe-cCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 664 4442 344689999999 999888886531 112468999999987554 4556678888887653
No 241
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.39 E-value=1.7e-08 Score=97.65 Aligned_cols=315 Identities=10% Similarity=0.013 Sum_probs=201.9
Q ss_pred eEEcCCCCEEEEEeCCeEEEEecCCCcEEEEe--ecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeec--
Q 014755 13 SCFSPNARYIAVAVDYRLVVRDAHSFKVVQLF--SCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDE-- 88 (419)
Q Consensus 13 ~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~-- 88 (419)
+...++|++.+...++.|..|+..+++..... .....|.++...++|.+.+.. .+ +-+.+||..+++.......
T Consensus 178 i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt-~~-~Gl~~~~~~~~~~~~~~~~~~ 255 (795)
T 4a2l_A 178 TLYRQGDQIYIGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVAT-EG-AGLFLINPKTKEIKNYLHSPS 255 (795)
T ss_dssp EEEEETTEEEEEESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEE-BS-SCEEEEETTTTEEEEECCCTT
T ss_pred EEECCCCCEEEEECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEE-CC-CCeEEEeCCCCeEEEeecCCC
Confidence 55666776555433557999998887765432 134678899888888755544 33 3488999877654322211
Q ss_pred -----CCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEecc--------CCCCeeeEEEccCCCEEEEEeecCC
Q 014755 89 -----GLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQS--------PKHASKGVAFTQDGKFAAICTRRDC 155 (419)
Q Consensus 89 -----~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~~~~~~~ 155 (419)
....|.++...++|...+.. .. -|.+||..+++...+.. ....|.++...++|.. .+|+.+
T Consensus 256 ~~~~l~~~~i~~i~~d~~g~lWigt-~~--Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~l-Wigt~~-- 329 (795)
T 4a2l_A 256 NPKSISSNYIRSLAMDSQNRLWIGT-FN--DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGM-WLGTYF-- 329 (795)
T ss_dssp CTTSCSCSBEEEEEECTTSCEEEEE-SS--CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCE-EEEESS--
T ss_pred CccccCCCeEEEEEEcCCCCEEEEe-CC--hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCE-EEEECC--
Confidence 13569999998888755544 43 38899998887666432 2245788888888864 445543
Q ss_pred CCeEEEEeccCCeEEEEEe------ccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecC-------CC
Q 014755 156 KDYINLLSCHTWEIMGVFA------VDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYE-------SG 222 (419)
Q Consensus 156 ~g~v~i~d~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~-------~~ 222 (419)
+-|..++..+........ .....|.++...++|...+ ++.++.|..|+........+.... ..
T Consensus 330 -~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWi---Gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~ 405 (795)
T 4a2l_A 330 -GGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWI---GTNDGGLNLYNPITQRFTSYTLQEDESARGIGS 405 (795)
T ss_dssp -SCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEE---EESSSCEEEECTTTCCEEEECCC------CCSC
T ss_pred -CCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEE---EECCCCeEEEcCCCCcEEEEecCCCCcccCCCC
Confidence 568888876543221111 1234588998888887655 344667999998443344442111 12
Q ss_pred CceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccc
Q 014755 223 LGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDA 302 (419)
Q Consensus 223 ~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (419)
..|.++...++|+.|..|+.++-|.+||..+++... +.....
T Consensus 406 ~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~-~~~~~~------------------------------------- 447 (795)
T 4a2l_A 406 NNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVEN-FNQRNS------------------------------------- 447 (795)
T ss_dssp SCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEE-ECTTTS-------------------------------------
T ss_pred ccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEE-eecCCC-------------------------------------
Confidence 368999998888756777777779999987765322 211000
Q ss_pred cCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc-------c
Q 014755 303 TNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV-------Q 375 (419)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~-------~ 375 (419)
..+...|.++...++|++.+... . .|.+||..+++...... .
T Consensus 448 ---------------------------~l~~~~v~~i~~d~~g~lwigt~-~---Gl~~~~~~~~~~~~~~~~~~~~~~~ 496 (795)
T 4a2l_A 448 ---------------------------QLVNENVYAILPDGEGNLWLGTL-S---ALVRFNPEQRSFTTIEKEKDGTPVV 496 (795)
T ss_dssp ---------------------------CCSCSCEEEEEECSSSCEEEEES-S---CEEEEETTTTEEEECCBCTTCCBCC
T ss_pred ---------------------------CcCCCeeEEEEECCCCCEEEEec-C---ceeEEeCCCCeEEEccccccccccC
Confidence 00233588899888888666554 3 48889988776544321 2
Q ss_pred CCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeE
Q 014755 376 KDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYC 410 (419)
Q Consensus 376 ~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~ 410 (419)
...|.++...++|++.+.. . +.+..|+..+++.
T Consensus 497 ~~~i~~i~~d~~g~lWigt-~-~Gl~~~~~~~~~~ 529 (795)
T 4a2l_A 497 SKQITTLFRDSHKRLWIGG-E-EGLSVFKQEGLDI 529 (795)
T ss_dssp CCCEEEEEECTTCCEEEEE-S-SCEEEEEEETTEE
T ss_pred CceEEEEEECCCCCEEEEe-C-CceEEEeCCCCeE
Confidence 3578999999999866644 4 5688899887765
No 242
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.36 E-value=2.5e-10 Score=92.91 Aligned_cols=189 Identities=11% Similarity=0.035 Sum_probs=133.0
Q ss_pred CeEEcCCCCEEEEEe---CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeec
Q 014755 12 PSCFSPNARYIAVAV---DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDE 88 (419)
Q Consensus 12 ~~~~s~d~~~la~~~---~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~ 88 (419)
.++|+||+.+.++.+ ++.|.++|+.+++.+..+.-........+..+++.|..+...++.+.++|..+.+.+.++..
T Consensus 25 Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~ 104 (266)
T 2iwa_A 25 GLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTH 104 (266)
T ss_dssp EEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEEEEC
T ss_pred cEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEEEC
Confidence 489999975444443 46799999999999987653333333334445778888887778999999999988888754
Q ss_pred CCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-ecc--CCC---CeeeEEEccCCCEEEEEeecCCCCeEEEE
Q 014755 89 GLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQS--PKH---ASKGVAFTQDGKFAAICTRRDCKDYINLL 162 (419)
Q Consensus 89 ~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~--~~~---~~~~~~~~~~~~~l~~~~~~~~~g~v~i~ 162 (419)
... ....+++||+.++++...+ .|.++|.++.+... +.. .+. ....+.|. ++ .+++.... .+.|.+.
T Consensus 105 g~~--~g~glt~Dg~~l~vs~gs~-~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg-~lyvn~~~--~~~V~vI 177 (266)
T 2iwa_A 105 QMK--DGWGLATDGKILYGSDGTS-ILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NG-EVWANIWQ--TDCIARI 177 (266)
T ss_dssp CSS--SCCEEEECSSSEEEECSSS-EEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETT--SSEEEEE
T ss_pred CCC--CeEEEEECCCEEEEECCCC-eEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CC-EEEEecCC--CCeEEEE
Confidence 311 1234567888888876544 99999999977666 322 111 34677777 66 45554432 3699999
Q ss_pred eccCCeEEEEEeccc-------------cceeeeeECCCCCeEEEEcCCCCceEEEEcC
Q 014755 163 SCHTWEIMGVFAVDT-------------LDLADIEWSPDDSAIVIWDSPLEYKVLIYSP 208 (419)
Q Consensus 163 d~~~~~~~~~~~~~~-------------~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~ 208 (419)
|..+++.+..+.... .....++|+|+++.+++.. ...++++..++
T Consensus 178 D~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTg-k~~~~v~~i~l 235 (266)
T 2iwa_A 178 SAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG-KLWPKLFEIKL 235 (266)
T ss_dssp ETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE-TTCSEEEEEEE
T ss_pred ECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEEC-CCCCeEEEEEE
Confidence 999999988886531 2458999999999888754 33566776665
No 243
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.35 E-value=3.6e-09 Score=92.81 Aligned_cols=239 Identities=10% Similarity=-0.074 Sum_probs=165.3
Q ss_pred CCEEEEEeCCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEE
Q 014755 19 ARYIAVAVDYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARW 98 (419)
Q Consensus 19 ~~~la~~~~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~ 98 (419)
..+|+.+....|+.+++.+............+..++|.+.+..|+.+....+.|..++++.......+.........+++
T Consensus 87 ~~~l~~~~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glav 166 (386)
T 3v65_B 87 EPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAV 166 (386)
T ss_dssp CCEEEEECBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEE
T ss_pred cceeEeecCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEE
Confidence 45677777778999999887777666666778999999877777777655679999998876544334333345678899
Q ss_pred CCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccc
Q 014755 99 SPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDT 177 (419)
Q Consensus 99 ~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~ 177 (419)
.+.+..|+.+....+.|.+.++....... +.........++++|.+..|+.+.... .+.|+.++++...........-
T Consensus 167 d~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~-~~~I~r~~~dG~~~~~~~~~~~ 245 (386)
T 3v65_B 167 DWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGN-TPRIEASSMDGSGRRIIADTHL 245 (386)
T ss_dssp ETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSS-SCEEEEEETTSCSCEEEECSSC
T ss_pred EeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCC-CCEEEEEeCCCCCcEEEEECCC
Confidence 88777777776544589998887654333 333335568999999888777765431 2689999887543333333333
Q ss_pred cceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceee
Q 014755 178 LDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTF 257 (419)
Q Consensus 178 ~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~ 257 (419)
.....++++|++..|++.+.. .+.|..++++|.....+.... .....++++ ..+..+++-...+.|..++..+++.+
T Consensus 246 ~~PnGlavd~~~~~lY~aD~~-~~~I~~~d~dG~~~~~~~~~~-~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~ 322 (386)
T 3v65_B 246 FWPNGLTIDYAGRRMYWVDAK-HHVIERANLDGSHRKAVISQG-LPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQ 322 (386)
T ss_dssp SCEEEEEEEGGGTEEEEEETT-TTEEEEECTTSCSCEEEECSS-CSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSC
T ss_pred CCeeeEEEeCCCCEEEEEECC-CCEEEEEeCCCCeeEEEEECC-CCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcce
Confidence 457899999998888887754 679999999765544443221 225778888 34445555556678988887777766
Q ss_pred eeec
Q 014755 258 AEFM 261 (419)
Q Consensus 258 ~~~~ 261 (419)
..+.
T Consensus 323 ~~i~ 326 (386)
T 3v65_B 323 EIIR 326 (386)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 6654
No 244
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.34 E-value=9e-09 Score=88.91 Aligned_cols=239 Identities=10% Similarity=-0.073 Sum_probs=163.7
Q ss_pred CCEEEEEeCCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEE
Q 014755 19 ARYIAVAVDYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARW 98 (419)
Q Consensus 19 ~~~la~~~~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~ 98 (419)
..+|..+....|+..++.+............+..++|++.+..|+.+....+.|..++++.......+.........+++
T Consensus 44 ~~~ll~~~~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glav 123 (349)
T 3v64_C 44 EPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAV 123 (349)
T ss_dssp CCEEEEECBSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEE
T ss_pred CceeEeecccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEE
Confidence 45677777677888898877766666666678999999887777777655579999998876544444333445678999
Q ss_pred CCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccc
Q 014755 99 SPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDT 177 (419)
Q Consensus 99 ~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~ 177 (419)
.+.+..|+.+....+.|.+.++....... +...-.....++++|.+..|+.+.... .+.|..++++...........-
T Consensus 124 d~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~-~~~I~r~~~dG~~~~~~~~~~~ 202 (349)
T 3v64_C 124 DWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGN-TPRIEASSMDGSGRRIIADTHL 202 (349)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSS-SCEEEEEETTSCSCEESCCSSC
T ss_pred ecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCC-CCEEEEEeCCCCCcEEEEECCC
Confidence 98777777776544589999998754433 333335568999999877777765431 2689998887533222222233
Q ss_pred cceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceee
Q 014755 178 LDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTF 257 (419)
Q Consensus 178 ~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~ 257 (419)
.....++++|++..|.+.+.. .+.|..++++|.....+.... .....++++. .+..+++-...+.|..++..+++.+
T Consensus 203 ~~PnGla~d~~~~~lY~aD~~-~~~I~~~~~dG~~~~~~~~~~-~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~ 279 (349)
T 3v64_C 203 FWPNGLTIDYAGRRMYWVDAK-HHVIERANLDGSHRKAVISQG-LPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQ 279 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETT-TTEEEEEETTSCSCEEEECSS-CSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSC
T ss_pred CCcceEEEeCCCCEEEEEECC-CCEEEEEeCCCCceEEEEeCC-CCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCcc
Confidence 457899999999988887754 679999999776544443221 2257788883 4444555555678888887777766
Q ss_pred eeec
Q 014755 258 AEFM 261 (419)
Q Consensus 258 ~~~~ 261 (419)
..+.
T Consensus 280 ~~i~ 283 (349)
T 3v64_C 280 EIIR 283 (349)
T ss_dssp EEEE
T ss_pred EEec
Confidence 5554
No 245
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.32 E-value=1.7e-07 Score=87.00 Aligned_cols=237 Identities=11% Similarity=-0.027 Sum_probs=152.7
Q ss_pred CEEEEEeCCeEEEEecCCCc--EEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcc-eeeeecCCccEeEE
Q 014755 20 RYIAVAVDYRLVVRDAHSFK--VVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEW-TCKIDEGLAGIAYA 96 (419)
Q Consensus 20 ~~la~~~~~~i~i~~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~-~~~~~~~~~~v~~~ 96 (419)
.+|..+....|+..++.+.. .............++|++.+..|+.+....+.|..++++.... ...+.........+
T Consensus 10 ~~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~Gl 89 (619)
T 3s94_A 10 PLLLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGL 89 (619)
T ss_dssp CCEEEECSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEE
T ss_pred ceEEEeccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeE
Confidence 46777778889999988653 3334445567889999998888887766557899999876532 22333333568899
Q ss_pred EECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEec
Q 014755 97 RWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAV 175 (419)
Q Consensus 97 ~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~ 175 (419)
++.+.+..|+.+....+.|.+.++.+..... ....-.....+++.|.+..|+.+... ..+.|...+++..........
T Consensus 90 AvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g-~~~~I~r~~~dG~~~~~l~~~ 168 (619)
T 3s94_A 90 ACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWG-EVPKIERAGMDGSSRFIIINS 168 (619)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECS-SSCEEEEEETTSCSCEEEECS
T ss_pred EEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccC-CCCEEEEEECCCCceEEEEeC
Confidence 9999888888887666699999998765444 33344556899999987777766532 125788777764333323323
Q ss_pred cccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCce
Q 014755 176 DTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWK 255 (419)
Q Consensus 176 ~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~ 255 (419)
.-.....+++.++++.|++.+.. .+.|..++++|...+.+... ......++++..+ ..+.+-...+.|...|..+++
T Consensus 169 ~~~~P~Glald~~~~~LY~aD~~-~~~I~~~~~dG~~~~~~~~~-~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 169 EIYWPNGLTLDYEEQKLYWADAK-LNFIHKSNLDGTNRQAVVKG-SLPHPFALTLFED-ILYWTDWSTHSILACNKYTGE 245 (619)
T ss_dssp SCSSEEEEEEETTTTEEEEEETT-TCCEEEESSSCCEEC----------CCCEEESSS-EEEEECTTTCSEEEEESSSCC
T ss_pred CCCCCcEEEEEccCCEEEEEeCC-CCeEEEecCCCCccEEEEeC-CCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCc
Confidence 34567899999998888887754 67899999977655444321 1113567888665 333343456789999988877
Q ss_pred eeeee
Q 014755 256 TFAEF 260 (419)
Q Consensus 256 ~~~~~ 260 (419)
....+
T Consensus 246 ~~~~i 250 (619)
T 3s94_A 246 GLREI 250 (619)
T ss_dssp CCEEC
T ss_pred ccEEE
Confidence 55444
No 246
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.32 E-value=1.9e-09 Score=101.55 Aligned_cols=195 Identities=11% Similarity=0.052 Sum_probs=122.9
Q ss_pred CCeEEEEeccCCeEEEEEccCCcceeeeecCCcc----------E-eEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE
Q 014755 59 SEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAG----------I-AYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH 127 (419)
Q Consensus 59 ~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~ 127 (419)
+..+++++.+ +.|.-+|..+|+.+.+....... + ..++. .+..+++++.++ .|..+|.++|+.+.
T Consensus 66 ~g~vyv~~~~-~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg-~l~alD~~tG~~~W 141 (668)
T 1kv9_A 66 DGVIYTSMSW-SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDG-RLIALDAKTGKAIW 141 (668)
T ss_dssp TTEEEEEEGG-GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTS-EEEEEETTTCCEEE
T ss_pred CCEEEEECCC-CeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCC-EEEEEECCCCCEee
Confidence 4566666655 79999999999887776433211 0 11222 345677777776 99999999998776
Q ss_pred -eccCC----CCee-eEEEccCCCEEEEEeec---CCCCeEEEEeccCCeEEEEEeccc---c-----------------
Q 014755 128 -VQSPK----HASK-GVAFTQDGKFAAICTRR---DCKDYINLLSCHTWEIMGVFAVDT---L----------------- 178 (419)
Q Consensus 128 -~~~~~----~~~~-~~~~~~~~~~l~~~~~~---~~~g~v~i~d~~~~~~~~~~~~~~---~----------------- 178 (419)
..... ..+. ...+ .+ ..++++... ...|.|+.+|.++++.+-.+.... .
T Consensus 142 ~~~~~~~~~~~~~~~~P~v-~~-~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g 219 (668)
T 1kv9_A 142 SQQTTDPAKPYSITGAPRV-VK-GKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQG 219 (668)
T ss_dssp EEECSCTTSSCBCCSCCEE-ET-TEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCS
T ss_pred eeccCCCCCcceecCCCEE-EC-CEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCc
Confidence 32211 1111 1111 13 345554431 113799999999999887765311 0
Q ss_pred -----------ceeeeeECCCCCeEEEEcCCCCc-------------------eEEEEcC-CCceEEEEeecCCC-----
Q 014755 179 -----------DLADIEWSPDDSAIVIWDSPLEY-------------------KVLIYSP-DGRCLLKYQAYESG----- 222 (419)
Q Consensus 179 -----------~v~~~~~~~~~~~l~~~~~~~~~-------------------~i~~~d~-~~~~~~~~~~~~~~----- 222 (419)
....+++.|+...+++. ..++ .|..+|. +|+.+-.++...+.
T Consensus 220 ~~~w~~~~gg~~w~~~a~d~~~~~vy~~--~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~ 297 (668)
T 1kv9_A 220 DQYWKLGGGGTVWDSMAYDPELDLLYVG--TGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFT 297 (668)
T ss_dssp SCHHHHCEECCCCSCEEEETTTTEEEEE--CCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCC
T ss_pred cceeeeCCCCccccceEEcCCCCEEEEe--CCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCcccccc
Confidence 01235777877777773 3333 4999999 89988887653221
Q ss_pred --CceeEEEEccCCC---eEEEEEecCcEEEEEcCCceeeeeec
Q 014755 223 --LGVKSISWSPCGQ---FLAVGSYDQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 223 --~~v~~~~~s~~~~---~l~~~~~d~~i~v~d~~~~~~~~~~~ 261 (419)
.+.....+..+|+ .++.++.+|.++++|..+|+.+....
T Consensus 298 ~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~ 341 (668)
T 1kv9_A 298 ATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEK 341 (668)
T ss_dssp CCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred CCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccc
Confidence 1222223334665 68889999999999999999886554
No 247
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.32 E-value=1.1e-08 Score=87.68 Aligned_cols=237 Identities=11% Similarity=0.036 Sum_probs=151.4
Q ss_pred cccCeEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEeec--------------------CcceeEEEEec-CCCeEEEEe
Q 014755 9 QTGPSCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFSC--------------------LDKISYIEWAL-DSEYILCGL 66 (419)
Q Consensus 9 ~~~~~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~~--------------------~~~v~~~~~s~-~~~~l~~~~ 66 (419)
....++++++|+++.++. ++.|..|+..+++....... ...+..+++.+ +|+ |+++.
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v~d 98 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYIVD 98 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEEEE
Confidence 344589999999777775 78899999887665443210 13578899998 565 55554
Q ss_pred ccCCeEEEEEccCCcceeeeecC-----CccEeEEEECC-CCCEEEEEec----------------CCCeEEEEEcCCCe
Q 014755 67 YKRLMIQAWSLTQPEWTCKIDEG-----LAGIAYARWSP-DSRHILTTSD----------------FQLRLTVWSLLNTA 124 (419)
Q Consensus 67 ~~~g~i~iw~~~~~~~~~~~~~~-----~~~v~~~~~~~-~~~~l~~~~~----------------~~~~i~iwd~~~~~ 124 (419)
.. +.|..+|..+++.. .+... ......+++.+ +|...++-.. ..+.|..+|..+++
T Consensus 99 ~~-~~i~~~d~~~g~~~-~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 176 (322)
T 2fp8_A 99 CY-YHLSVVGSEGGHAT-QLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE 176 (322)
T ss_dssp TT-TEEEEECTTCEECE-EEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred CC-CCEEEEeCCCCEEE-EecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence 34 45888887765432 22111 12467899999 8976665432 12478899988777
Q ss_pred EEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCC---eEEEEEeccccceeeeeECCCCCeEEEEcC----
Q 014755 125 CVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTW---EIMGVFAVDTLDLADIEWSPDDSAIVIWDS---- 197 (419)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---- 197 (419)
...+.........++++|+++.|+++... .+.|..|++... +. ..+....+ ...+++.++|+..+....
T Consensus 177 ~~~~~~~~~~p~gia~~~dg~~lyv~d~~--~~~I~~~~~~~~~~~~~-~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~ 252 (322)
T 2fp8_A 177 TTLLLKELHVPGGAEVSADSSFVLVAEFL--SHQIVKYWLEGPKKGTA-EVLVKIPN-PGNIKRNADGHFWVSSSEELDG 252 (322)
T ss_dssp EEEEEEEESCCCEEEECTTSSEEEEEEGG--GTEEEEEESSSTTTTCE-EEEEECSS-EEEEEECTTSCEEEEEEEETTS
T ss_pred EEEeccCCccCcceEECCCCCEEEEEeCC--CCeEEEEECCCCcCCcc-ceEEeCCC-CCCeEECCCCCEEEEecCcccc
Confidence 55432222345789999999987776543 368999998752 21 11111223 778999999985554211
Q ss_pred ----CCCceEEEEcCCCceEEEEeecCC--CCceeEEEEccCCCeEEEEEecCcEEEEEcCC
Q 014755 198 ----PLEYKVLIYSPDGRCLLKYQAYES--GLGVKSISWSPCGQFLAVGSYDQTLRVLNHLT 253 (419)
Q Consensus 198 ----~~~~~i~~~d~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~ 253 (419)
...+.|..+|.+++.+..+..... ...+..+++ .+++++++....+.|.++++..
T Consensus 253 ~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 253 NMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp STTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred cccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 114679999998888887765432 124666766 4565555555677899988753
No 248
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.31 E-value=3.4e-12 Score=111.47 Aligned_cols=221 Identities=13% Similarity=0.011 Sum_probs=121.8
Q ss_pred CCCEEEEEe-CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCcc-Ee-
Q 014755 18 NARYIAVAV-DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAG-IA- 94 (419)
Q Consensus 18 d~~~la~~~-~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~-v~- 94 (419)
++..|++++ ++.|+.||..+|+.+..+.. +.+.+..+.+++..+++++.+ |.|+.||.++|+.+.....+... +.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~d-g~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPND-GSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTT-CCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCC-CEEEEEECCCCceeeeeeccCcccccc
Confidence 567788887 78999999999999877766 666666677788777776655 89999999998876555433211 11
Q ss_pred EEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEE
Q 014755 95 YARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVF 173 (419)
Q Consensus 95 ~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~ 173 (419)
...+. ++..+++++.++ .++.||.++|+.+. +..+. ...++|++..+++++.+ +.|+.||.++++.+-.+
T Consensus 86 sp~~~-~~~~v~~g~~dg-~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~d---g~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQD-IWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTE---YTITMYDTKTRELRWNA 156 (369)
T ss_dssp CSCC------CCCCEEEE-EEEEECCC--------------------------EEEEEEE---EEEECCCSSSSSCCCEE
T ss_pred CceEe-cCCEEEEEeCCC-EEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecC---CEEEEEECCCCCEEEeE
Confidence 11111 344567766666 99999999998776 32222 23456788888888876 79999999998876555
Q ss_pred eccccceeeeeECCCC---CeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEE--EEecCcEE
Q 014755 174 AVDTLDLADIEWSPDD---SAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAV--GSYDQTLR 247 (419)
Q Consensus 174 ~~~~~~v~~~~~~~~~---~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~--~~~d~~i~ 247 (419)
.... .....+.++. ..+++ ++.++.++.||. +|+.+........ .+....++++|...+. ...++.++
T Consensus 157 ~~~~--~~~~~~~~~~~~~~~v~~--~~~dg~v~a~d~~tG~~~W~~~~~~p--v~~~~~~~~dg~~~v~~~~~~~~~l~ 230 (369)
T 2hz6_A 157 TYFD--YAASLPEDDVDYKMSHFV--SNGDGLVVTVDSESGDVLWIQNYASP--VVAFYVWQREGLRKVMHINVAVETLR 230 (369)
T ss_dssp EEEE--ECCBCCCCCTTCCCCEEE--EETSCEEEEECTTTCCEEEEEECSSC--EEEEEECTTSSCEEECCEEEEHHHHH
T ss_pred eccc--ccCccccCCccccceEEE--ECCCCEEEEEECCCCcEEEEecCCCc--eEEEEEecCCceEeccceeeccccee
Confidence 4322 2334444432 34555 455899999999 8888777653322 2333455666643210 11245667
Q ss_pred EEEcCCce
Q 014755 248 VLNHLTWK 255 (419)
Q Consensus 248 v~d~~~~~ 255 (419)
.+|..+|+
T Consensus 231 ~ld~~tG~ 238 (369)
T 2hz6_A 231 YLTFMSGE 238 (369)
T ss_dssp HHHHHHHH
T ss_pred eeehhcCC
Confidence 77776666
No 249
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.31 E-value=4.2e-08 Score=94.97 Aligned_cols=321 Identities=11% Similarity=0.084 Sum_probs=203.1
Q ss_pred eEEcCCCCEEEEEeCCeEEEEecCCCcEEEEeecC-c---ceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeec
Q 014755 13 SCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFSCL-D---KISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDE 88 (419)
Q Consensus 13 ~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~~~-~---~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~ 88 (419)
+...++|.+. .++.+.+..||..+.+........ . .|.++...++|...+... +.+..|+..+++.......
T Consensus 93 i~~d~~g~lW-igT~~Gl~~yd~~~~~f~~~~~~~~~~~~~i~~i~~d~~g~lwi~t~---~gl~~~~~~~~~~~~~~~~ 168 (795)
T 4a2l_A 93 VKTDSQGRVW-IGTRDGLSRYDEEKDIFQNFFYEKNGKHLQVNGIEEISPEQLLISTP---EGLIMFDIKESKFIDDSFS 168 (795)
T ss_dssp EEECTTSCEE-EEESSCEEEEETTTTEEEEECCEETTEECCCCEEEEEETTEEEEEET---TEEEEEETTTTEEECSSSC
T ss_pred EEECCCCCEE-EEeCCchheeCCCCCeEEeccccccCCCceEEEEEECCCCCEEEEEC---CceEEEECCCCEEEeccCC
Confidence 5566777654 455566999999887755533211 1 288999888887665442 3589999876643321111
Q ss_pred C-Ccc-EeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEec--cCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEec
Q 014755 89 G-LAG-IAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQ--SPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSC 164 (419)
Q Consensus 89 ~-~~~-v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~ 164 (419)
. ... |.++...+++...+ +...+ .|..|+.++++...+. .....+.++...+++.+.+ ++.+ +.+.+||.
T Consensus 169 ~~~~~~i~~i~~d~~g~lwi-gt~~~-Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~---~Gl~~~~~ 242 (795)
T 4a2l_A 169 TAMHKTIASTLYRQGDQIYI-GTSTD-GLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWV-ATEG---AGLFLINP 242 (795)
T ss_dssp HHHHTCCEEEEEEETTEEEE-EESSS-CEEEEETTTCCEEECC----CCCEEEEEEEETTEEEE-EEBS---SCEEEEET
T ss_pred CCCCcceEEEEECCCCCEEE-EECCC-CEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEE-EECC---CCeEEEeC
Confidence 1 123 78888887776544 55444 4889998887765531 2345678888877776544 4432 35899998
Q ss_pred cCCeEEEEEec-------cccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecC------CCCceeEEEEc
Q 014755 165 HTWEIMGVFAV-------DTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYE------SGLGVKSISWS 231 (419)
Q Consensus 165 ~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~------~~~~v~~~~~s 231 (419)
.+++....... ....|.++...++|...+. +.+ .|.+|+........+.... ....|.++..+
T Consensus 243 ~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig---t~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D 318 (795)
T 4a2l_A 243 KTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIG---TFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMD 318 (795)
T ss_dssp TTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEE---ESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEEC
T ss_pred CCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEE---eCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEe
Confidence 87655433221 1356889999888886654 223 6889998544455443211 12369999999
Q ss_pred cCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEE
Q 014755 232 PCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRY 311 (419)
Q Consensus 232 ~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (419)
++|. |..|+.++-|..|+..+... ..+.+....
T Consensus 319 ~~g~-lWigt~~~Gl~~~~~~~~~~-~~~~~~~~~--------------------------------------------- 351 (795)
T 4a2l_A 319 SQGG-MWLGTYFGGLNYYHPIRNRF-KNIRNIPYK--------------------------------------------- 351 (795)
T ss_dssp TTSC-EEEEESSSCEEEECGGGGSS-EEECCCTTS---------------------------------------------
T ss_pred CCcC-EEEEECCCCeEEeCCCcccc-eEEcCCCCC---------------------------------------------
Confidence 8886 45577777788888655432 111110000
Q ss_pred EeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc---------cCCCeeEE
Q 014755 312 EVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV---------QKDPIRAA 382 (419)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~---------~~~~v~~~ 382 (419)
..-....|.++...++|.+.+ |+.+ +-|..|+..+++...... ....|.++
T Consensus 352 -----------------~~l~~~~V~~i~~d~~g~lWi-Gt~~--~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i 411 (795)
T 4a2l_A 352 -----------------NSLSDNVVSCIVEDKDKNLWI-GTND--GGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAV 411 (795)
T ss_dssp -----------------SSCSCSSEEEEEECTTSCEEE-EESS--SCEEEECTTTCCEEEECCC------CCSCSCEEEE
T ss_pred -----------------CCCCCCeeEEEEECCCCCEEE-EECC--CCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEE
Confidence 000233588999999887655 5554 679999988776654431 23578999
Q ss_pred EeCCCCCeEEEEeCCCcEEEeecCCCeEEecC
Q 014755 383 TWDPTCTRLVLCTGSSHLYMWTPSGAYCVSNP 414 (419)
Q Consensus 383 ~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~~ 414 (419)
...++++.|..|+.++.|.+|+..+++....+
T Consensus 412 ~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~ 443 (795)
T 4a2l_A 412 YVDEKKSLVYIGTHAGGLSILHRNSGQVENFN 443 (795)
T ss_dssp EEETTTTEEEEEETTTEEEEEETTTCCEEEEC
T ss_pred EEcCCCCEEEEEeCcCceeEEeCCCCcEEEee
Confidence 99888884555777778999999887766543
No 250
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.30 E-value=3.7e-08 Score=86.71 Aligned_cols=240 Identities=10% Similarity=-0.032 Sum_probs=166.5
Q ss_pred CCEEEEEeCCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC----cceeeeecCCccEe
Q 014755 19 ARYIAVAVDYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP----EWTCKIDEGLAGIA 94 (419)
Q Consensus 19 ~~~la~~~~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~----~~~~~~~~~~~~v~ 94 (419)
..+|+.+....|+..++.+............+..|+|++.+..|+.+....+.|+.+++... .....+........
T Consensus 83 ~~~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 83 IAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp SCEEEEEETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred cceeEEeccceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 35777888889999999988777777777789999999987778777655578999998752 23333333445678
Q ss_pred EEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEE
Q 014755 95 YARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVF 173 (419)
Q Consensus 95 ~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~ 173 (419)
.+++.+.+..|+.+....+.|.+.+++...... +.........+++.|.+..|+.+... ..+.|...+++........
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~-~~~~I~~~~~dG~~~~~~~ 241 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGVDIYSLV 241 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECS-SSCCEEEEETTSCSCEEEE
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCC-CCCEEEEEeCCCCccEEEE
Confidence 899998777777776555599999998765554 33344457899999987777766532 1257999988754333333
Q ss_pred eccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeec-CCCCceeEEEEccCCCeEEEEEecCcEEEEEcC
Q 014755 174 AVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAY-ESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHL 252 (419)
Q Consensus 174 ~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~ 252 (419)
...-.....+++++++..|++.|.. .+.|..+|++|.....+... .......++++. .+..+.+-...+.|..+|..
T Consensus 242 ~~~l~~P~glavd~~~~~lY~aD~~-~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~ 319 (400)
T 3p5b_L 242 TENIQWPNGITLDLLSGRLYWVDSK-LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRL 319 (400)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETT-TTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESS
T ss_pred ECCCCceEEEEEEeCCCEEEEEECC-CCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcC
Confidence 3333567899999999999887754 67999999977655555332 122246677773 33444555566789999988
Q ss_pred Cceeeeeec
Q 014755 253 TWKTFAEFM 261 (419)
Q Consensus 253 ~~~~~~~~~ 261 (419)
+|+.+..+.
T Consensus 320 ~G~~~~~i~ 328 (400)
T 3p5b_L 320 TGSDVNLLA 328 (400)
T ss_dssp SCCCCEEEE
T ss_pred CCCceEEEe
Confidence 887666654
No 251
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.30 E-value=7.4e-11 Score=101.68 Aligned_cols=264 Identities=14% Similarity=0.034 Sum_probs=161.8
Q ss_pred EEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-ecc
Q 014755 52 YIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQS 130 (419)
Q Consensus 52 ~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~ 130 (419)
++....++. +.+++.+ +.|..|| .+++...........+.++...+++. +.+++.+ |..+|. +++... ...
T Consensus 24 ~~~~d~~g~-l~v~t~~-~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~---l~~~d~-~g~~~~~~~~ 95 (330)
T 3hxj_A 24 SPILAKNGT-IYLGSSN-KNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGT-IYFGSDK---VYAINP-DGTEKWRFDT 95 (330)
T ss_dssp CCEECTTSC-EECSSTT-TTTEEEC-TTSCEEESSCGGGEEEECCEETTTTE-ECCSSCE---EEEECC-CGGGGGGSCC
T ss_pred CceEccCCe-EEEEcCC-CEEEEEC-CCCcEEEEEecCCCcccceEEecCCc-EEEecCc---EEEECC-CCcEEEEEEC
Confidence 444545664 5555544 6899999 88876655444444566777777775 4444332 777876 443322 222
Q ss_pred CCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCC
Q 014755 131 PKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDG 210 (419)
Q Consensus 131 ~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~ 210 (419)
.........+. +..+.+++.+ +.|..+|.. ++...........+.++...+++..++ ++.++.|..+|..+
T Consensus 96 ~~~~~~~~~~~--~~~l~v~t~~---~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~v---gt~~~~l~~~d~~g 166 (330)
T 3hxj_A 96 KKAIVSDFTIF--EDILYVTSMD---GHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYV---GSNDNYLYAINPDG 166 (330)
T ss_dssp -----CCEEEE--TTEEEEECTT---SEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEE---ECTTSEEEEECTTS
T ss_pred CCCcccCceEE--CCEEEEEecC---CEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEE---EcCCCEEEEECCCC
Confidence 22222333333 4566666654 789999998 777666665555667777877887554 35578999999987
Q ss_pred ceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeee
Q 014755 211 RCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELC 290 (419)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (419)
+.+..+..... .+.++...+++...+ ++ +.|..+| .+++.+..+...
T Consensus 167 ~~~~~~~~~~~--~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~--------------------------- 213 (330)
T 3hxj_A 167 TEKWRFKTNDA--ITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAG--------------------------- 213 (330)
T ss_dssp CEEEEEECSSC--CCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCS---------------------------
T ss_pred CEeEEEecCCC--ceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccC---------------------------
Confidence 76666654433 577788877876544 44 7899999 666655443211
Q ss_pred ccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCce
Q 014755 291 LNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPA 370 (419)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~ 370 (419)
...+.++...++|.+.+ ++.+ +.|..+|. +++..
T Consensus 214 ------------------------------------------~~~~~~~~~~~~g~l~v-~t~~--~gl~~~~~-~g~~~ 247 (330)
T 3hxj_A 214 ------------------------------------------YWTVTRPAISEDGTIYV-TSLD--GHLYAINP-DGTEK 247 (330)
T ss_dssp ------------------------------------------SCCCSCCEECTTSCEEE-EETT--TEEEEECT-TSCEE
T ss_pred ------------------------------------------CcceeceEECCCCeEEE-EcCC--CeEEEECC-CCCEe
Confidence 11245567778876555 4444 77888874 45554
Q ss_pred eecc-cCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEEe
Q 014755 371 AILV-QKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCVS 412 (419)
Q Consensus 371 ~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~ 412 (419)
.... ....+.++...+++. |..++.+|.|..+|..+.....
T Consensus 248 ~~~~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~~g~~~~~ 289 (330)
T 3hxj_A 248 WRFKTGKRIESSPVIGNTDT-IYFGSYDGHLYAINPDGTEKWN 289 (330)
T ss_dssp EEEECSSCCCSCCEECTTSC-EEEECTTCEEEEECTTSCEEEE
T ss_pred EEeeCCCCccccceEcCCCe-EEEecCCCCEEEECCCCcEEEE
Confidence 4443 333455566766665 5567788889999975443333
No 252
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.28 E-value=7e-09 Score=97.70 Aligned_cols=194 Identities=9% Similarity=-0.003 Sum_probs=118.6
Q ss_pred CCEEEEEe-CCeEEEEecCCCcEEEEeecCcce------------eEEEEecCCCeEEEEeccCCeEEEEEccCCcceee
Q 014755 19 ARYIAVAV-DYRLVVRDAHSFKVVQLFSCLDKI------------SYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCK 85 (419)
Q Consensus 19 ~~~la~~~-~~~i~i~~~~~~~~~~~~~~~~~v------------~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~ 85 (419)
+..|++++ ++.|.-+|..+|+.+-.+...... ..+++ ++..+++++.+ +.|..+|..+|+.+..
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~d-g~l~alD~~tG~~~W~ 142 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLD-GRLIALDAKTGKAIWS 142 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTT-SEEEEEETTTCCEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCC-CEEEEEECCCCCEeee
Confidence 33455554 788999999999988766432110 12233 35577777766 8999999999998776
Q ss_pred eecCCcc-EeEEEECC--CCCEEEEEecC-----CCeEEEEEcCCCeEEE-eccC---CC--------------------
Q 014755 86 IDEGLAG-IAYARWSP--DSRHILTTSDF-----QLRLTVWSLLNTACVH-VQSP---KH-------------------- 133 (419)
Q Consensus 86 ~~~~~~~-v~~~~~~~--~~~~l~~~~~~-----~~~i~iwd~~~~~~~~-~~~~---~~-------------------- 133 (419)
....... ...+.-+| .+..++++... .+.|..+|.++|+.+. +... ..
T Consensus 143 ~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~ 222 (668)
T 1kv9_A 143 QQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQY 222 (668)
T ss_dssp EECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCH
T ss_pred eccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccce
Confidence 6542110 00011111 13345554332 2489999999998876 3211 10
Q ss_pred --------CeeeEEEccCCCEEEEEeecCC----------------CCeEEEEeccCCeEEEEEecc--c-------cce
Q 014755 134 --------ASKGVAFTQDGKFAAICTRRDC----------------KDYINLLSCHTWEIMGVFAVD--T-------LDL 180 (419)
Q Consensus 134 --------~~~~~~~~~~~~~l~~~~~~~~----------------~g~v~i~d~~~~~~~~~~~~~--~-------~~v 180 (419)
....++++|+...++++..+.. .+.|.-+|.++++.+-.++.. . .+.
T Consensus 223 w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~ 302 (668)
T 1kv9_A 223 WKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQI 302 (668)
T ss_dssp HHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCE
T ss_pred eeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCc
Confidence 0124788888888888765410 024999999999988777652 1 122
Q ss_pred eeeeECCCCC---eEEEEcCCCCceEEEEcC-CCceEEEEe
Q 014755 181 ADIEWSPDDS---AIVIWDSPLEYKVLIYSP-DGRCLLKYQ 217 (419)
Q Consensus 181 ~~~~~~~~~~---~l~~~~~~~~~~i~~~d~-~~~~~~~~~ 217 (419)
....+..+|+ .+++ ...+|.++++|. +|+.+....
T Consensus 303 ~~~d~~~~G~~~~~v~~--~~~~G~l~~lD~~tG~~l~~~~ 341 (668)
T 1kv9_A 303 TLAELNIDGKPRKVLMQ--APKNGFFYVLDRTNGKLISAEK 341 (668)
T ss_dssp EEEEEEETTEEEEEEEE--CCTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEeccCCcEEEEEEE--ECCCCEEEEEECCCCCEecccc
Confidence 2222223564 3555 677899999999 898875543
No 253
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.27 E-value=6.1e-09 Score=96.02 Aligned_cols=191 Identities=6% Similarity=-0.067 Sum_probs=114.5
Q ss_pred CEEEEE-e-CCeEEEEec-CCCcEEEEeecCcc--e----------eEEEEecCCCeEEEEeccCCeEEEEEccCCccee
Q 014755 20 RYIAVA-V-DYRLVVRDA-HSFKVVQLFSCLDK--I----------SYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTC 84 (419)
Q Consensus 20 ~~la~~-~-~~~i~i~~~-~~~~~~~~~~~~~~--v----------~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~ 84 (419)
..|.++ . ++.|.-+|. .+|+.+-.+..... + ..++. ++..+++++.+ +.+..+|..+|+.+.
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~d-g~l~alD~~tG~~~W 139 (571)
T 2ad6_A 63 DMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQAN-GHLLALDAKTGKINW 139 (571)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTT-SEEEEEETTTCCEEE
T ss_pred CEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCC-CEEEEEECCCCCEEE
Confidence 344444 4 578999999 89998876643221 0 12333 35577777765 899999999998876
Q ss_pred eeecCCc----cEe-EEEECCCCCEEEEEec------CCCeEEEEEcCCCeEEE-eccCCCC------------------
Q 014755 85 KIDEGLA----GIA-YARWSPDSRHILTTSD------FQLRLTVWSLLNTACVH-VQSPKHA------------------ 134 (419)
Q Consensus 85 ~~~~~~~----~v~-~~~~~~~~~~l~~~~~------~~~~i~iwd~~~~~~~~-~~~~~~~------------------ 134 (419)
+...... .+. ..... ++ .+++++. ++ .|..+|.++|+.+. +......
T Consensus 140 ~~~~~~~~~~~~~~~~P~v~-~g-~v~vg~~~~~~~~~g-~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~ 216 (571)
T 2ad6_A 140 EVEVCDPKVGSTLTQAPFVA-KD-TVLMGCSGAELGVRG-AVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQ 216 (571)
T ss_dssp EEECCCGGGTCBCCSCCEEE-TT-EEEEECBCGGGTCCC-EEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCC
T ss_pred EecCCCCCccceeccCCEEE-CC-EEEEEecCCccCCCC-EEEEEECCCCcEEEEEccCCCccccccCcccccccccccc
Confidence 6543220 111 11111 34 5555544 44 99999999988775 2221110
Q ss_pred -------------------e-eeEEEccCCCEEEEEeecCC-------------CCeEEEEeccCCeEEEEEecccc---
Q 014755 135 -------------------S-KGVAFTQDGKFAAICTRRDC-------------KDYINLLSCHTWEIMGVFAVDTL--- 178 (419)
Q Consensus 135 -------------------~-~~~~~~~~~~~l~~~~~~~~-------------~g~v~i~d~~~~~~~~~~~~~~~--- 178 (419)
+ ..+++.++...++.+..+.. .+.|..+|.++++.+-.++....
T Consensus 217 ~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~ 296 (571)
T 2ad6_A 217 FGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEW 296 (571)
T ss_dssp SSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSS
T ss_pred cccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCccc
Confidence 0 23566777677777653210 13699999999998877654211
Q ss_pred ---ceee---eeECCCCC---eEEEEcCCCCceEEEEcC-CCceEEEEee
Q 014755 179 ---DLAD---IEWSPDDS---AIVIWDSPLEYKVLIYSP-DGRCLLKYQA 218 (419)
Q Consensus 179 ---~v~~---~~~~~~~~---~l~~~~~~~~~~i~~~d~-~~~~~~~~~~ 218 (419)
.+.. +...++|+ .+++ ...++.++++|. +|+.+.....
T Consensus 297 d~~~~~~p~l~~~~~~G~~~~~v~~--~~~~G~l~~lD~~tG~~~w~~~~ 344 (571)
T 2ad6_A 297 DFAGVNQMVLTDQPVNGKMTPLLSH--IDRNGILYTLNRENGNLIVAEKV 344 (571)
T ss_dssp CCCCCCCCEEEEEEETTEEEEEEEE--ECTTSEEEEEETTTCCEEEEEES
T ss_pred ccccCCCCEEEecccCCcEEEEEEE--eCCCcEEEEEECCCCCEEeeecc
Confidence 1111 22223664 3444 456889999998 8888776653
No 254
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.27 E-value=4.5e-09 Score=84.46 Aligned_cols=194 Identities=14% Similarity=0.115 Sum_probs=131.9
Q ss_pred cEEEEeecCcc--eeEEEEecCCCeEEEEecc-CCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeE
Q 014755 39 KVVQLFSCLDK--ISYIEWALDSEYILCGLYK-RLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRL 115 (419)
Q Consensus 39 ~~~~~~~~~~~--v~~~~~s~~~~~l~~~~~~-~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i 115 (419)
++++.+.|... ...+.|+ ++.+..+.+.+ ++.|+++|+++++.+..+.... ........+++..|+......+.+
T Consensus 32 ~vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v 109 (262)
T 3nol_A 32 QIVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLG 109 (262)
T ss_dssp EEEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEE
T ss_pred EEEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEE
Confidence 45667777654 4889998 66544555433 1389999999999887775433 333333344567787777655699
Q ss_pred EEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccc-----cceeeeeECCCC
Q 014755 116 TVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDT-----LDLADIEWSPDD 189 (419)
Q Consensus 116 ~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~-----~~v~~~~~~~~~ 189 (419)
.++|.++.+.+. +.... ....++++++.|+.+..+ +.|.++|..+.+.+..+.... ..++.+.|. +|
T Consensus 110 ~v~D~~t~~~~~ti~~~~---eG~glt~dg~~L~~SdGs---~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G 182 (262)
T 3nol_A 110 FVWNIRNLRQVRSFNYDG---EGWGLTHNDQYLIMSDGT---PVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG 182 (262)
T ss_dssp EEEETTTCCEEEEEECSS---CCCCEEECSSCEEECCSS---SEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred EEEECccCcEEEEEECCC---CceEEecCCCEEEEECCC---CeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC
Confidence 999999988877 44332 223344677777776533 689999999998888776532 224457776 66
Q ss_pred CeEEEEcCCCCceEEEEcC-CCceEEEEeecC----------CCCceeEEEEccCCCeEEEEEec
Q 014755 190 SAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYE----------SGLGVKSISWSPCGQFLAVGSYD 243 (419)
Q Consensus 190 ~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~----------~~~~v~~~~~s~~~~~l~~~~~d 243 (419)
+..+. .-.++.|.+.|+ +|+.+..+.... .....+.++++|+++.|+..+..
T Consensus 183 ~lyan--~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 183 EIFAN--VWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp EEEEE--ETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred EEEEE--EccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 53332 345679999999 999988887531 11256899999998877777643
No 255
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.26 E-value=3.7e-08 Score=90.94 Aligned_cols=197 Identities=9% Similarity=-0.012 Sum_probs=116.2
Q ss_pred CCCEEEEEeCCeEEEEecCCCcEEEEeecCcce----------eEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeee
Q 014755 18 NARYIAVAVDYRLVVRDAHSFKVVQLFSCLDKI----------SYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKID 87 (419)
Q Consensus 18 d~~~la~~~~~~i~i~~~~~~~~~~~~~~~~~v----------~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~ 87 (419)
+++.++....+.|.-+|..+|+.+-.+...... ..++. .+..+++++.+ +.|.-+|.++|+.+....
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~d-g~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLD-ASVVALNKNTGKVVWKKK 144 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETT-TEEEEEESSSCCEEEEEE
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCC-CEEEEEECCCCCEEeeec
Confidence 444444444466999999999988766532211 22233 34567777766 899999999998876654
Q ss_pred cCCc----cEe-EEEECC---CCC-EEEEEec-----CCCeEEEEEcCCCeEEE-eccCCC-------------------
Q 014755 88 EGLA----GIA-YARWSP---DSR-HILTTSD-----FQLRLTVWSLLNTACVH-VQSPKH------------------- 133 (419)
Q Consensus 88 ~~~~----~v~-~~~~~~---~~~-~l~~~~~-----~~~~i~iwd~~~~~~~~-~~~~~~------------------- 133 (419)
.... .+. ...... +++ .+++++. ..+.|..+|.++|+.+- ......
T Consensus 145 ~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~ 224 (582)
T 1flg_A 145 FADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAP 224 (582)
T ss_dssp CSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCT
T ss_pred CCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccc
Confidence 3221 111 111111 233 4555432 13489999999988765 221100
Q ss_pred ---------------------Ce-eeEEEccCCCEEEEEeec-----------C----------CCCeEEEEeccCCeEE
Q 014755 134 ---------------------AS-KGVAFTQDGKFAAICTRR-----------D----------CKDYINLLSCHTWEIM 170 (419)
Q Consensus 134 ---------------------~~-~~~~~~~~~~~l~~~~~~-----------~----------~~g~v~i~d~~~~~~~ 170 (419)
.+ ..++++|+...++++..+ . ..+.|.-+|.++++.+
T Consensus 225 ~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~ 304 (582)
T 1flg_A 225 SWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVK 304 (582)
T ss_dssp TSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEE
T ss_pred cCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEE
Confidence 00 235677777777777642 0 0158999999999998
Q ss_pred EEEec--ccc----ceeeee-EC---CCCC---eEEEEcCCCCceEEEEcC-CCceEEEEeec
Q 014755 171 GVFAV--DTL----DLADIE-WS---PDDS---AIVIWDSPLEYKVLIYSP-DGRCLLKYQAY 219 (419)
Q Consensus 171 ~~~~~--~~~----~v~~~~-~~---~~~~---~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~ 219 (419)
-.++. |.. .+.... .. .+|+ .++. .+.++.++++|. +|+.+......
T Consensus 305 W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~--~~~~G~l~~lD~~tG~~lw~~~~~ 365 (582)
T 1flg_A 305 WFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAH--ADRNGFFYVVDRSNGKLQNAFPFV 365 (582)
T ss_dssp EEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEE--ECTTSEEEEEETTTCCEEEEEESS
T ss_pred EEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEE--ECCCceEEEEECCCCCEecccccc
Confidence 77654 211 111111 11 4664 4444 567899999999 89888766543
No 256
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.24 E-value=1.6e-06 Score=80.76 Aligned_cols=236 Identities=7% Similarity=-0.092 Sum_probs=162.4
Q ss_pred CCEEEEEeCCeEEEEecCCCcEEEEee--cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEE
Q 014755 19 ARYIAVAVDYRLVVRDAHSFKVVQLFS--CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYA 96 (419)
Q Consensus 19 ~~~la~~~~~~i~i~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~ 96 (419)
..+|+++....|+..++++........ .-..+..|+|++.+..|+.+....+.|+.++++.......+.........+
T Consensus 6 ~~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~Gl 85 (628)
T 4a0p_A 6 EAFLLFSRRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGM 85 (628)
T ss_dssp CCEEEEEETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEE
T ss_pred CcEEEEEeCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceE
Confidence 357888888899999998776544433 345688999999888888776666899999987655443443333457789
Q ss_pred EECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEec
Q 014755 97 RWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAV 175 (419)
Q Consensus 97 ~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~ 175 (419)
++.+.+..|+.+....+.|.+.++....... ....-.....+++.|....|+.+... ..+.|...+++........ .
T Consensus 86 AvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g-~~~~I~r~~~dG~~~~~l~-~ 163 (628)
T 4a0p_A 86 AVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWG-GKPKIDRAAMDGSERTTLV-P 163 (628)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECS-SSCEEEEEETTSCSCEEEE-C
T ss_pred EEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCC-CCCEEEEEeCCCCceEEEE-C
Confidence 9988888888877655699999998754433 32344556899999977677766532 1368888888754332222 3
Q ss_pred cccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCce
Q 014755 176 DTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWK 255 (419)
Q Consensus 176 ~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~ 255 (419)
.-.....+++.++++.|++.+. ..+.|..+|++|.....+..... ...++++.. +..+++-...+.|...|..+++
T Consensus 164 ~~~~P~GlalD~~~~~LY~aD~-~~~~I~~~d~dG~~~~v~~~~l~--~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 164 NVGRANGLTIDYAKRRLYWTDL-DTNLIESSNMLGLNREVIADDLP--HPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp SCSSEEEEEEETTTTEEEEEET-TTTEEEEEETTSCSCEEEEECCS--CEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred CCCCcceEEEccccCEEEEEEC-CCCEEEEEcCCCCceEEeeccCC--CceEEEEEC-CEEEEecCCCCEEEEEECCCCC
Confidence 3456789999999999988775 46789999996654444433222 467888865 3344444456789999987776
Q ss_pred eeeee
Q 014755 256 TFAEF 260 (419)
Q Consensus 256 ~~~~~ 260 (419)
....+
T Consensus 240 ~~~~l 244 (628)
T 4a0p_A 240 NRTII 244 (628)
T ss_dssp SCEEE
T ss_pred ceEEE
Confidence 54443
No 257
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.24 E-value=1.1e-08 Score=82.14 Aligned_cols=191 Identities=10% Similarity=0.054 Sum_probs=130.0
Q ss_pred cEEEEeecCcc--eeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEE
Q 014755 39 KVVQLFSCLDK--ISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLT 116 (419)
Q Consensus 39 ~~~~~~~~~~~--v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~ 116 (419)
+++..+.|... ...+.|+ +..|..+..++|.|+++|+++++.+..+ - ..........+++..|+......+.+.
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g~~Ly~ltw~~~~v~ 119 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDGERLYQLTWTEGLLF 119 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECSSCEEEEESSSCEEE
T ss_pred EEEEEEcCCCccccceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeCCEEEEEEccCCEEE
Confidence 45666776544 4788887 3456555556689999999999988777 2 233333223345667777765555999
Q ss_pred EEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccc-----cceeeeeECCCCC
Q 014755 117 VWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDT-----LDLADIEWSPDDS 190 (419)
Q Consensus 117 iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~-----~~v~~~~~~~~~~ 190 (419)
+||.++.+.+. +... ..-..++ +|++.|+.+..+ +.|.++|..+.+.+..+.... ..++.+.|. +|+
T Consensus 120 V~D~~Tl~~~~ti~~~-~eGwGLt--~Dg~~L~vSdGs---~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~ 192 (268)
T 3nok_A 120 TWSGMPPQRERTTRYS-GEGWGLC--YWNGKLVRSDGG---TMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGV 192 (268)
T ss_dssp EEETTTTEEEEEEECS-SCCCCEE--EETTEEEEECSS---SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred EEECCcCcEEEEEeCC-CceeEEe--cCCCEEEEECCC---CEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCE
Confidence 99999998887 4433 2224444 678887776543 799999999998888776532 134566776 665
Q ss_pred eEEEEcCCCCceEEEEcC-CCceEEEEeecC-----------CCCceeEEEEccCCCeEEEEEe
Q 014755 191 AIVIWDSPLEYKVLIYSP-DGRCLLKYQAYE-----------SGLGVKSISWSPCGQFLAVGSY 242 (419)
Q Consensus 191 ~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~-----------~~~~v~~~~~s~~~~~l~~~~~ 242 (419)
+.+. .-....|.+.|+ +|+.+..+.... .....+.++++|+++.|+..+.
T Consensus 193 -lyan-vw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 193 -IYAN-IWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp -EEEE-ETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred -EEEE-ECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 4332 344679999999 999888886431 1135789999998876666553
No 258
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.23 E-value=6.6e-08 Score=82.80 Aligned_cols=204 Identities=10% Similarity=0.022 Sum_probs=128.9
Q ss_pred cceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeec--------------------CCccEeEEEECCCCCEEEE
Q 014755 48 DKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDE--------------------GLAGIAYARWSPDSRHILT 107 (419)
Q Consensus 48 ~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~--------------------~~~~v~~~~~~~~~~~l~~ 107 (419)
....+++|.++|+++.++..+ +.|..|+..+++.. .+.. ....+..+++.+++..|++
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~-~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v 96 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQD-GRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI 96 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTT-SEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE
T ss_pred CCceEEEEcCCCCEEEEEcCC-CeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEE
Confidence 456789999999877777755 79999998765433 2211 0134788999983344666
Q ss_pred EecCCCeEEEEEcCCCeEEEecc-----CCCCeeeEEEcc-CCCEEEEEeec--------------CCCCeEEEEeccCC
Q 014755 108 TSDFQLRLTVWSLLNTACVHVQS-----PKHASKGVAFTQ-DGKFAAICTRR--------------DCKDYINLLSCHTW 167 (419)
Q Consensus 108 ~~~~~~~i~iwd~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~l~~~~~~--------------~~~g~v~i~d~~~~ 167 (419)
+.... .+..+|..+++...+.. .......+++.+ +|+..++.... ...+.|..+|..++
T Consensus 97 ~d~~~-~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~ 175 (322)
T 2fp8_A 97 VDCYY-HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTK 175 (322)
T ss_dssp EETTT-EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTT
T ss_pred EECCC-CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCC
Confidence 65545 58888887664433211 112357899999 88765554221 11257899998777
Q ss_pred eEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCc---eEEEEeecCCCCceeEEEEccCCCeEEEEEe--
Q 014755 168 EIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGR---CLLKYQAYESGLGVKSISWSPCGQFLAVGSY-- 242 (419)
Q Consensus 168 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~---~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-- 242 (419)
+...... .......++++|+++.+++.+. ..+.|+.|++.+. ....+... .. ...++++++|++.++...
T Consensus 176 ~~~~~~~-~~~~p~gia~~~dg~~lyv~d~-~~~~I~~~~~~~~~~~~~~~~~~~--~g-P~gi~~d~~G~l~va~~~~~ 250 (322)
T 2fp8_A 176 ETTLLLK-ELHVPGGAEVSADSSFVLVAEF-LSHQIVKYWLEGPKKGTAEVLVKI--PN-PGNIKRNADGHFWVSSSEEL 250 (322)
T ss_dssp EEEEEEE-EESCCCEEEECTTSSEEEEEEG-GGTEEEEEESSSTTTTCEEEEEEC--SS-EEEEEECTTSCEEEEEEEET
T ss_pred EEEEecc-CCccCcceEECCCCCEEEEEeC-CCCeEEEEECCCCcCCccceEEeC--CC-CCCeEECCCCCEEEEecCcc
Confidence 6433322 2234567999999998887553 3678999998532 22222221 12 788999999986666544
Q ss_pred --------cCcEEEEEcCCceeeeee
Q 014755 243 --------DQTLRVLNHLTWKTFAEF 260 (419)
Q Consensus 243 --------d~~i~v~d~~~~~~~~~~ 260 (419)
.+.|..+|.. ++.+..+
T Consensus 251 ~~~~~~~~~~~v~~~d~~-G~~~~~~ 275 (322)
T 2fp8_A 251 DGNMHGRVDPKGIKFDEF-GNILEVI 275 (322)
T ss_dssp TSSTTSCEEEEEEEECTT-SCEEEEE
T ss_pred cccccCCCccEEEEECCC-CCEEEEE
Confidence 4567777753 5555444
No 259
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.22 E-value=1.2e-07 Score=80.49 Aligned_cols=223 Identities=10% Similarity=0.096 Sum_probs=137.6
Q ss_pred CeEEcCCCCEEEEEe-CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccC-CeEEEEEccCCcceeeeec-
Q 014755 12 PSCFSPNARYIAVAV-DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKR-LMIQAWSLTQPEWTCKIDE- 88 (419)
Q Consensus 12 ~~~~s~d~~~la~~~-~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~-g~i~iw~~~~~~~~~~~~~- 88 (419)
.++|+|+|+++++-. .+.|..||..+ +.............+++.++|+++++....+ ..|..++..+++.......
T Consensus 36 gia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~ 114 (306)
T 2p4o_A 36 NLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLP 114 (306)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECT
T ss_pred eEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCC
Confidence 389999998666654 68899999876 4444455556789999999999665553322 2477777777765432221
Q ss_pred CCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCe--EEEec------cC-C--CCeeeEEEccCCCEEEEEeecCCCC
Q 014755 89 GLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTA--CVHVQ------SP-K--HASKGVAFTQDGKFAAICTRRDCKD 157 (419)
Q Consensus 89 ~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~--~~~~~------~~-~--~~~~~~~~~~~~~~l~~~~~~~~~g 157 (419)
.......++..+++. ++++....+.|..+|..+++ ..... .. . .....+ +++++.|+++... .+
T Consensus 115 ~~~~~~g~~~~~~~~-~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~--~~ 189 (306)
T 2p4o_A 115 DAIFLNGITPLSDTQ-YLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTE--KM 189 (306)
T ss_dssp TCSCEEEEEESSSSE-EEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETT--TT
T ss_pred CccccCcccccCCCc-EEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCC--CC
Confidence 122234555555554 44444333489999987653 22111 00 1 123455 8899888877654 47
Q ss_pred eEEEEeccC-CeE--EEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEc---
Q 014755 158 YINLLSCHT-WEI--MGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWS--- 231 (419)
Q Consensus 158 ~v~i~d~~~-~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s--- 231 (419)
.|+.+++.. ++. ...+.. ......+++.++|+.++. ....+.|.+++.+|+.............+++++|.
T Consensus 190 ~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va--~~~~~~V~~~~~~G~~~~~~~~~~~~~~p~~~a~~g~~ 266 (306)
T 2p4o_A 190 LLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGA--THIYNSVVRIAPDRSTTIIAQAEQGVIGSTAVAFGQTE 266 (306)
T ss_dssp EEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEE--CBTTCCEEEECTTCCEEEEECGGGTCTTEEEEEECCST
T ss_pred EEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEE--eCCCCeEEEECCCCCEEEEeecccccCCceEEEEeccc
Confidence 899999874 321 111111 134677899999976554 34467899999987664332222222368999998
Q ss_pred cCCCeEEEEEec
Q 014755 232 PCGQFLAVGSYD 243 (419)
Q Consensus 232 ~~~~~l~~~~~d 243 (419)
|+++.|+..+..
T Consensus 267 ~d~~~LyVt~~~ 278 (306)
T 2p4o_A 267 GDCTAIYVVTNG 278 (306)
T ss_dssp TTTTEEEEEECT
T ss_pred CCCCEEEEECCC
Confidence 888777766654
No 260
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.22 E-value=3.1e-08 Score=91.33 Aligned_cols=192 Identities=10% Similarity=-0.051 Sum_probs=118.1
Q ss_pred CEEEEE-e-CCeEEEEec-CCCcEEEEeecCcc------------eeEEEEecCCCe----EEEEeccCCeEEEEEccCC
Q 014755 20 RYIAVA-V-DYRLVVRDA-HSFKVVQLFSCLDK------------ISYIEWALDSEY----ILCGLYKRLMIQAWSLTQP 80 (419)
Q Consensus 20 ~~la~~-~-~~~i~i~~~-~~~~~~~~~~~~~~------------v~~~~~s~~~~~----l~~~~~~~g~i~iw~~~~~ 80 (419)
..|+++ . ++.|.-+|. .+|+.+-.+..... ...++++|.+.. +++++.+ +.+..+|..+|
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~d-g~l~AlDa~TG 141 (599)
T 1w6s_A 63 GKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLD-GNVAALNAETG 141 (599)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTT-SEEEEEETTTC
T ss_pred CEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCC-CEEEEEECCCC
Confidence 344444 4 578999999 89998876653221 124566554545 7777766 89999999999
Q ss_pred cceeeeecCCc----cEe-EEEECCCCCEEEEEec------CCCeEEEEEcCCCeEEE-eccCCCC--------------
Q 014755 81 EWTCKIDEGLA----GIA-YARWSPDSRHILTTSD------FQLRLTVWSLLNTACVH-VQSPKHA-------------- 134 (419)
Q Consensus 81 ~~~~~~~~~~~----~v~-~~~~~~~~~~l~~~~~------~~~~i~iwd~~~~~~~~-~~~~~~~-------------- 134 (419)
+.+.+...... .+. .... .++ .+++++. ++ .|+.+|.++|+.+- .......
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g-~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~ 218 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRG-YLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNP 218 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCC-EEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCG
T ss_pred CEEEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCC-eEEEEECCCCcEEEEEcCCCCccccccccccccccc
Confidence 88766543220 111 1111 144 4555442 44 99999999988765 2211110
Q ss_pred -----------------------e-eeEEEccCCCEEEEEeecCC-------------CCeEEEEeccCCeEEEEEeccc
Q 014755 135 -----------------------S-KGVAFTQDGKFAAICTRRDC-------------KDYINLLSCHTWEIMGVFAVDT 177 (419)
Q Consensus 135 -----------------------~-~~~~~~~~~~~l~~~~~~~~-------------~g~v~i~d~~~~~~~~~~~~~~ 177 (419)
+ ...++.++...++++..+.. .+.|.-+|.++++.+-.++...
T Consensus 219 ~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~ 298 (599)
T 1w6s_A 219 HYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTP 298 (599)
T ss_dssp GGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESST
T ss_pred cccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCC
Confidence 0 13566677777877765310 1379999999999887766532
Q ss_pred cce---------eeeeEC-CCCC---eEEEEcCCCCceEEEEcC-CCceEEEEe
Q 014755 178 LDL---------ADIEWS-PDDS---AIVIWDSPLEYKVLIYSP-DGRCLLKYQ 217 (419)
Q Consensus 178 ~~v---------~~~~~~-~~~~---~l~~~~~~~~~~i~~~d~-~~~~~~~~~ 217 (419)
... .-+... .+|+ .++. ...++.++++|. +|+.+....
T Consensus 299 ~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~--~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 299 HDEWDYAGVNVMMLSEQKDKDGKARKLLTH--PDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp TCSSCCCCCCCCEEEEEECTTSCEEEEEEE--ECTTSEEEEEETTTCCEEEEEE
T ss_pred CccccccCCCccEEEeccccCCcEEEEEEE--ECCCcEEEEEECCCCCEeeccc
Confidence 211 112221 4563 3444 466899999999 898887665
No 261
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.21 E-value=1.8e-08 Score=92.91 Aligned_cols=198 Identities=9% Similarity=-0.043 Sum_probs=119.1
Q ss_pred CCeEEEEeccCCeEEEEEc-cCCcceeeeecCCc-cE----------eEEEECCCCCEEEEEecCCCeEEEEEcCCCeEE
Q 014755 59 SEYILCGLYKRLMIQAWSL-TQPEWTCKIDEGLA-GI----------AYARWSPDSRHILTTSDFQLRLTVWSLLNTACV 126 (419)
Q Consensus 59 ~~~l~~~~~~~g~i~iw~~-~~~~~~~~~~~~~~-~v----------~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~ 126 (419)
+..+++++..++.|.-+|. .+|+.+.+...... .+ ..++. .+..+++++.++ .+..+|.++|+.+
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg-~l~alD~~tG~~~ 138 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANG-HLLALDAKTGKIN 138 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTS-EEEEEETTTCCEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCC-EEEEEECCCCCEE
Confidence 4456666651378999999 89987766543221 00 11222 355677777766 9999999999877
Q ss_pred E-eccCC----CCee-eEEEccCCCEEEEEeecC---CCCeEEEEeccCCeEEEEEeccccc------------------
Q 014755 127 H-VQSPK----HASK-GVAFTQDGKFAAICTRRD---CKDYINLLSCHTWEIMGVFAVDTLD------------------ 179 (419)
Q Consensus 127 ~-~~~~~----~~~~-~~~~~~~~~~l~~~~~~~---~~g~v~i~d~~~~~~~~~~~~~~~~------------------ 179 (419)
. ..... ..+. ..... + ..++++.... .++.|+.+|.++++.+-.+......
T Consensus 139 W~~~~~~~~~~~~~~~~P~v~-~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~ 216 (571)
T 2ad6_A 139 WEVEVCDPKVGSTLTQAPFVA-K-DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQ 216 (571)
T ss_dssp EEEECCCGGGTCBCCSCCEEE-T-TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCC
T ss_pred EEecCCCCCccceeccCCEEE-C-CEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccc
Confidence 6 22211 0221 11121 3 3555554310 1379999999999988766542211
Q ss_pred --------------------eeeeeECCCCCeEEEEcCC----------CC----ceEEEEcC-CCceEEEEeecCCC--
Q 014755 180 --------------------LADIEWSPDDSAIVIWDSP----------LE----YKVLIYSP-DGRCLLKYQAYESG-- 222 (419)
Q Consensus 180 --------------------v~~~~~~~~~~~l~~~~~~----------~~----~~i~~~d~-~~~~~~~~~~~~~~-- 222 (419)
...+++.++...+++..+. .+ +.|..+|. +|+.+-.++...+.
T Consensus 217 ~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~ 296 (571)
T 2ad6_A 217 FGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEW 296 (571)
T ss_dssp SSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSS
T ss_pred cccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCccc
Confidence 0124555666666663321 11 36999999 89888777653221
Q ss_pred -----CceeEEEEccCCC---eEEEEEecCcEEEEEcCCceeeeeec
Q 014755 223 -----LGVKSISWSPCGQ---FLAVGSYDQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 223 -----~~v~~~~~s~~~~---~l~~~~~d~~i~v~d~~~~~~~~~~~ 261 (419)
....-+...++|+ .++.++.+|.++++|..+|+.+..+.
T Consensus 297 d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 297 DFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEK 343 (571)
T ss_dssp CCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeec
Confidence 0111122234774 57778889999999999999887765
No 262
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.21 E-value=2.3e-08 Score=92.20 Aligned_cols=199 Identities=11% Similarity=-0.012 Sum_probs=121.7
Q ss_pred CCeEEEEec-cCCeEEEEEc-cCCcceeeeecCCcc-----------EeEEEECCCCCE----EEEEecCCCeEEEEEcC
Q 014755 59 SEYILCGLY-KRLMIQAWSL-TQPEWTCKIDEGLAG-----------IAYARWSPDSRH----ILTTSDFQLRLTVWSLL 121 (419)
Q Consensus 59 ~~~l~~~~~-~~g~i~iw~~-~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~----l~~~~~~~~~i~iwd~~ 121 (419)
+..+++++. + +.|.-+|. .+|+.+-+....... ...++.+|.+.. +++++.++ .|..+|.+
T Consensus 62 ~g~vyv~~~~~-~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg-~l~AlDa~ 139 (599)
T 1w6s_A 62 DGKMYIHTSFP-NNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDG-NVAALNAE 139 (599)
T ss_dssp TTEEEEECSTT-TCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTS-EEEEEETT
T ss_pred CCEEEEEeCCC-CEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCC-EEEEEECC
Confidence 446666665 4 68999999 899877665432210 123455444444 77777776 99999999
Q ss_pred CCeEEE-eccCC----CCee-eEEEccCCCEEEEEeec---CCCCeEEEEeccCCeEEEEEeccccce------------
Q 014755 122 NTACVH-VQSPK----HASK-GVAFTQDGKFAAICTRR---DCKDYINLLSCHTWEIMGVFAVDTLDL------------ 180 (419)
Q Consensus 122 ~~~~~~-~~~~~----~~~~-~~~~~~~~~~l~~~~~~---~~~g~v~i~d~~~~~~~~~~~~~~~~v------------ 180 (419)
+|+.+. ..... ..+. ...+ .++ .+++++.. +..+.|+-+|.++++.+-.+.......
T Consensus 140 TG~~~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~ 217 (599)
T 1w6s_A 140 TGETVWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKN 217 (599)
T ss_dssp TCCEEEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTC
T ss_pred CCCEEEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccc
Confidence 998776 22211 1221 1122 134 45554420 013799999999999887665432110
Q ss_pred --------------------------eeeeECCCCCeEEEEcCCC--------------CceEEEEcC-CCceEEEEeec
Q 014755 181 --------------------------ADIEWSPDDSAIVIWDSPL--------------EYKVLIYSP-DGRCLLKYQAY 219 (419)
Q Consensus 181 --------------------------~~~~~~~~~~~l~~~~~~~--------------~~~i~~~d~-~~~~~~~~~~~ 219 (419)
..+++.+....+++..+.. ...|..+|. +|+.+-.++..
T Consensus 218 ~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~ 297 (599)
T 1w6s_A 218 PHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKT 297 (599)
T ss_dssp GGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESS
T ss_pred ccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecC
Confidence 1244556666777643321 248999999 89888877764
Q ss_pred CCCC-------ceeEEEEc-cCC---CeEEEEEecCcEEEEEcCCceeeeeec
Q 014755 220 ESGL-------GVKSISWS-PCG---QFLAVGSYDQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 220 ~~~~-------~v~~~~~s-~~~---~~l~~~~~d~~i~v~d~~~~~~~~~~~ 261 (419)
.+.. ...-+... .+| +.++.++.+|.++++|.++|+.+....
T Consensus 298 ~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 298 PHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp TTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 4311 11112222 467 567778899999999999999887665
No 263
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.20 E-value=3.9e-09 Score=84.82 Aligned_cols=174 Identities=11% Similarity=0.084 Sum_probs=125.0
Q ss_pred eEEcCCCCEEEEEe-CC--eEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecC
Q 014755 13 SCFSPNARYIAVAV-DY--RLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEG 89 (419)
Q Consensus 13 ~~~s~d~~~la~~~-~~--~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~ 89 (419)
+.|+ ++.+..+.+ ++ .|+++|+++++.+....-..........++++.|......++.+.++|.++.+.+.++...
T Consensus 48 L~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~ 126 (262)
T 3nol_A 48 FFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYD 126 (262)
T ss_dssp EEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECS
T ss_pred EEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECC
Confidence 7888 665555554 44 7999999999999887755556555555567788888777789999999999998888654
Q ss_pred CccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-ecc--CCCC---eeeEEEccCCCEEEEEeecCCCCeEEEEe
Q 014755 90 LAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQS--PKHA---SKGVAFTQDGKFAAICTRRDCKDYINLLS 163 (419)
Q Consensus 90 ~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~--~~~~---~~~~~~~~~~~~l~~~~~~~~~g~v~i~d 163 (419)
... ..+++|++.|+.+...+ .|.++|.++.+... +.. ...+ ++.+.|. +|+ |.+.... .+.|.+.|
T Consensus 127 ~eG---~glt~dg~~L~~SdGs~-~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~-lyan~w~--~~~I~vID 198 (262)
T 3nol_A 127 GEG---WGLTHNDQYLIMSDGTP-VLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGE-IFANVWQ--TNKIVRID 198 (262)
T ss_dssp SCC---CCEEECSSCEEECCSSS-EEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETT--SSEEEEEC
T ss_pred CCc---eEEecCCCEEEEECCCC-eEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCE-EEEEEcc--CCeEEEEE
Confidence 322 33446788888776555 89999999977766 322 1222 3457775 664 5555433 26999999
Q ss_pred ccCCeEEEEEecc------------ccceeeeeECCCCCeEEEE
Q 014755 164 CHTWEIMGVFAVD------------TLDLADIEWSPDDSAIVIW 195 (419)
Q Consensus 164 ~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~l~~~ 195 (419)
.++++.+..+... ..-.+.++|+|+++.+++.
T Consensus 199 p~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVT 242 (262)
T 3nol_A 199 PETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVT 242 (262)
T ss_dssp TTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEE
T ss_pred CCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEE
Confidence 9999998887653 1245889999999988873
No 264
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.20 E-value=9.1e-08 Score=81.26 Aligned_cols=238 Identities=11% Similarity=-0.027 Sum_probs=159.0
Q ss_pred CEEEEEeCCeEEEEecCCCc--EEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcce-eeeecCCccEeEE
Q 014755 20 RYIAVAVDYRLVVRDAHSFK--VVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWT-CKIDEGLAGIAYA 96 (419)
Q Consensus 20 ~~la~~~~~~i~i~~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~-~~~~~~~~~v~~~ 96 (419)
.+|+++....|+..++.+.. .............++|.+.+..|+.+....+.|..+++..+... ..+.........+
T Consensus 5 p~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~gl 84 (318)
T 3sov_A 5 PLLLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGL 84 (318)
T ss_dssp CEEEEECEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEE
T ss_pred cEEEEEccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEE
Confidence 36777777789999998763 33333344567799999977777766655579999998776422 2233333456789
Q ss_pred EECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEec
Q 014755 97 RWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAV 175 (419)
Q Consensus 97 ~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~ 175 (419)
++.+.+..|+.+....+.|.++++....... ..........+++.|.+..|+.+... ..+.|...+++..........
T Consensus 85 avd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~-~~~~I~r~~~dG~~~~~~~~~ 163 (318)
T 3sov_A 85 ACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWG-EVPKIERAGMDGSSRFIIINS 163 (318)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECS-SSCEEEEEETTSCSCEEEECS
T ss_pred EEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecC-CCCEEEEEEcCCCCeEEEEEC
Confidence 9988777777775544599999998754433 33444556899999987777766531 136899888874332222222
Q ss_pred cccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCce
Q 014755 176 DTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWK 255 (419)
Q Consensus 176 ~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~ 255 (419)
.-.....++++|++..|++.|. ..+.|..+|++|...+.+.. .......++++..+ ..+.+-...+.|..++..+++
T Consensus 164 ~l~~Pnglavd~~~~~lY~aD~-~~~~I~~~d~dG~~~~~~~~-~~~~~P~glav~~~-~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 164 EIYWPNGLTLDYEEQKLYWADA-KLNFIHKSNLDGTNRQAVVK-GSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp SCSCEEEEEEETTTTEEEEEET-TTTEEEEEETTSCSCEEEEC-SCCSCEEEEEEETT-EEEEEETTTTEEEEEETTTCC
T ss_pred CCCCccEEEEeccCCEEEEEEC-CCCEEEEEcCCCCceEEEec-CCCCCceEEEEeCC-EEEEEecCCCeEEEEECCCCC
Confidence 3345689999999988888774 46899999997765555432 12225778888533 344454556789999988887
Q ss_pred eeeeec
Q 014755 256 TFAEFM 261 (419)
Q Consensus 256 ~~~~~~ 261 (419)
....+.
T Consensus 241 ~~~~i~ 246 (318)
T 3sov_A 241 GLREIH 246 (318)
T ss_dssp SCEEEE
T ss_pred ceEEEe
Confidence 666554
No 265
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.17 E-value=1.1e-06 Score=84.87 Aligned_cols=316 Identities=9% Similarity=0.001 Sum_probs=191.4
Q ss_pred eEEcCCCCEEEEEeCCeEEEEecCCCcEEEEee--------cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCccee
Q 014755 13 SCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFS--------CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTC 84 (419)
Q Consensus 13 ~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~--------~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~ 84 (419)
+...++|.+.+...++.|..||..+++...... ....|.++...++|.+.+.. .. -+.+||..+++...
T Consensus 168 i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwigt-~~--Gl~~~d~~~~~~~~ 244 (781)
T 3v9f_A 168 ATEAEDGKLYIGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIWIGT-SK--GLALFNANTETFTN 244 (781)
T ss_dssp EEEEETTEEEEEETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCEEEEE-TT--EEEEEETTTTEEEC
T ss_pred EEECCCCCEEEEecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCEEEEe-CC--cHheECCCCCcEEE
Confidence 344456655443335579999988876554321 13468899888888766544 32 58999987765432
Q ss_pred eeec-------CCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEecc---------------CCCCeeeEEEcc
Q 014755 85 KIDE-------GLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQS---------------PKHASKGVAFTQ 142 (419)
Q Consensus 85 ~~~~-------~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~---------------~~~~~~~~~~~~ 142 (419)
.... ....|.++...++|... .+...+ -|.++|..+++...+.. ....|.++...+
T Consensus 245 ~~~~~~~~~~l~~~~i~~i~~d~~g~lW-igt~~~-Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~ 322 (781)
T 3v9f_A 245 FHNNPGNIHGALSSYIFSIKQLKDNKLW-IATELN-GIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDS 322 (781)
T ss_dssp -----------CCCCEEEEEECTTSEEE-EEESSS-CEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECS
T ss_pred EEcCCCccccccCceEEEEEECCCCCEE-EEeCCC-CeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeC
Confidence 2111 23468899888887644 444433 48899988766543221 234578888888
Q ss_pred CCCEEEEEeecCCCCeEEEEeccCCeEEEEEe---------ccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceE
Q 014755 143 DGKFAAICTRRDCKDYINLLSCHTWEIMGVFA---------VDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCL 213 (419)
Q Consensus 143 ~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~ 213 (419)
+|. |.+++.+ +-|..++..+........ .....|.++...++|...+. +.++.|..|+......
T Consensus 323 ~g~-lWigt~~---~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWig---t~~~Gl~~~~~~~~~~ 395 (781)
T 3v9f_A 323 FNN-IWIGTWG---GGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIG---TDGGGINVFENGKRVA 395 (781)
T ss_dssp SCC-EEEEEBS---SCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEE---EBSSCEEEEETTEEEE
T ss_pred CCC-EEEEecC---CeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEE---eCCCcEEEEECCCCeE
Confidence 775 4555543 568888877543222110 12346888888888876553 3355688888843333
Q ss_pred EEEee--cCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeec
Q 014755 214 LKYQA--YESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCL 291 (419)
Q Consensus 214 ~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (419)
..+.. ......|.++...++|.+. .|+.++-|..+|..+++... +... .
T Consensus 396 ~~~~~~~~~~~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~-~~~~-~-------------------------- 446 (781)
T 3v9f_A 396 IYNKENRELLSNSVLCSLKDSEGNLW-FGTYLGNISYYNTRLKKFQI-IELE-K-------------------------- 446 (781)
T ss_dssp ECC-----CCCSBEEEEEECTTSCEE-EEETTEEEEEECSSSCEEEE-CCST-T--------------------------
T ss_pred EEccCCCCCCCcceEEEEECCCCCEE-EEeccCCEEEEcCCCCcEEE-eccC-C--------------------------
Confidence 22211 1112368899888887654 46665678888876654321 1100 0
Q ss_pred cCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCcee
Q 014755 292 NDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAA 371 (419)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~ 371 (419)
.....|.++...++|++.+... +.|..||..+++...
T Consensus 447 ---------------------------------------~~~~~v~~i~~d~~g~lwigt~----~Gl~~~~~~~~~~~~ 483 (781)
T 3v9f_A 447 ---------------------------------------NELLDVRVFYEDKNKKIWIGTH----AGVFVIDLASKKVIH 483 (781)
T ss_dssp ---------------------------------------TCCCCEEEEEECTTSEEEEEET----TEEEEEESSSSSCCE
T ss_pred ---------------------------------------CCCCeEEEEEECCCCCEEEEEC----CceEEEeCCCCeEEe
Confidence 0223478888888888666543 358889988877654
Q ss_pred ecc-c-----CCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEEec
Q 014755 372 ILV-Q-----KDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCVSN 413 (419)
Q Consensus 372 ~~~-~-----~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~ 413 (419)
... . ...|.++...++|++.+ ++.++.+..|+..+++....
T Consensus 484 ~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~ 530 (781)
T 3v9f_A 484 HYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQLVRKF 530 (781)
T ss_dssp EECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCEEEEE
T ss_pred cccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCeEEEc
Confidence 432 1 36799999999998655 45544588899887766554
No 266
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=99.17 E-value=1.5e-08 Score=96.96 Aligned_cols=198 Identities=10% Similarity=0.054 Sum_probs=117.8
Q ss_pred ceeEEEEe-cCCCeEEEEeccCC----eEEEEEccCC-cceee-eecCCccEeEEEECCCCCEEEEEecCC----CeEEE
Q 014755 49 KISYIEWA-LDSEYILCGLYKRL----MIQAWSLTQP-EWTCK-IDEGLAGIAYARWSPDSRHILTTSDFQ----LRLTV 117 (419)
Q Consensus 49 ~v~~~~~s-~~~~~l~~~~~~~g----~i~iw~~~~~-~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~~----~~i~i 117 (419)
.+...+|| |||++||.+....| +|+++|+.++ +.+.. +. .....++|+|||+.|+....+. ..|++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 57889999 99999998765433 5999999998 63211 11 1235689999999998887542 26888
Q ss_pred EEcCCCe---EEEec-cCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCe-EE--EEEe-ccccceeeeeECCCC
Q 014755 118 WSLLNTA---CVHVQ-SPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWE-IM--GVFA-VDTLDLADIEWSPDD 189 (419)
Q Consensus 118 wd~~~~~---~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~-~~--~~~~-~~~~~v~~~~~~~~~ 189 (419)
+++.+++ ...+. ........+.|+|||++|+..........|+++|+.++. .. ..+. ........+.|+. |
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g 330 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-T 330 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-T
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-C
Confidence 8887753 12222 222334678999999999987765444579999998752 12 2232 2233444555443 5
Q ss_pred CeEE-EEcCC--CCceEEEEcCCC-ceEEE-EeecCCCCceeEEEEccCCCeEEEEEecCc--EEEEEc
Q 014755 190 SAIV-IWDSP--LEYKVLIYSPDG-RCLLK-YQAYESGLGVKSISWSPCGQFLAVGSYDQT--LRVLNH 251 (419)
Q Consensus 190 ~~l~-~~~~~--~~~~i~~~d~~~-~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~--i~v~d~ 251 (419)
..++ ..+.. ....|+.+++.. ..... +..+.....+..+.+. .+.++++...++. |+++++
T Consensus 331 ~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 331 SHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp TEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred CEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 5544 43322 345788888842 22222 2222221134555554 2334455556664 555564
No 267
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.16 E-value=1.4e-06 Score=74.13 Aligned_cols=187 Identities=11% Similarity=-0.021 Sum_probs=127.5
Q ss_pred eEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC----CeEEE-eccCCCCe
Q 014755 61 YILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN----TACVH-VQSPKHAS 135 (419)
Q Consensus 61 ~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~----~~~~~-~~~~~~~~ 135 (419)
+|+.+.. ..|+..|+.+.+....+ .....+..++|.+++..|+.+....+.|..+++.+ ..... +...-...
T Consensus 3 ~ll~~~~--~~I~~i~~~~~~~~~~~-~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 79 (316)
T 1ijq_A 3 YLFFTNR--HEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 79 (316)
T ss_dssp EEEEECB--SSEEEEETTSCCCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred EEEEECC--CeEEEEECCCcceEehh-cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCc
Confidence 5666654 46999999887655444 34556789999998888888876656999999886 22222 22222445
Q ss_pred eeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEE
Q 014755 136 KGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLK 215 (419)
Q Consensus 136 ~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~ 215 (419)
..+++.+.+..|+.+... .+.|.++++........+.........+++.|.+..+++.+....+.|..++++|.....
T Consensus 80 ~glavd~~~~~ly~~d~~--~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~ 157 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWTDSV--LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 157 (316)
T ss_dssp CEEEEETTTTEEEEEETT--TTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE
T ss_pred CEEEEeecCCeEEEEECC--CCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEE
Confidence 889998877677666433 378999998765443333333456789999998888887665434789999998876665
Q ss_pred EeecCCCCceeEEEEccCCCeEEEEE-ecCcEEEEEcCC
Q 014755 216 YQAYESGLGVKSISWSPCGQFLAVGS-YDQTLRVLNHLT 253 (419)
Q Consensus 216 ~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~v~d~~~ 253 (419)
+... .......++++|++..|+.+. ..+.|..+|+..
T Consensus 158 ~~~~-~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 158 LVTE-NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp EECS-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEC-CCCCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 5322 223688999999877776665 456899999763
No 268
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.15 E-value=2.1e-08 Score=94.67 Aligned_cols=241 Identities=10% Similarity=-0.010 Sum_probs=141.0
Q ss_pred eEEcC-CCCEEEEEeC-C-----------eEEEEecCCCcEEEE--ee--cCcceeEEEEecCCCeEEEEeccCCeEEEE
Q 014755 13 SCFSP-NARYIAVAVD-Y-----------RLVVRDAHSFKVVQL--FS--CLDKISYIEWALDSEYILCGLYKRLMIQAW 75 (419)
Q Consensus 13 ~~~s~-d~~~la~~~~-~-----------~i~i~~~~~~~~~~~--~~--~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw 75 (419)
+++.| +|++++.|+. . .+.+||..+++.... .. +.....++++.++++.+++|+.+...+.+|
T Consensus 191 ~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~y 270 (656)
T 1k3i_A 191 AAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLY 270 (656)
T ss_dssp EEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEE
T ss_pred EEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEe
Confidence 67777 8999998862 1 488999988764432 22 233345678889999999998665689999
Q ss_pred EccCCcceeeeecCCc-cEeEEEECCCCCEEEEEec-CC----CeEEEEEcCCCeEEEeccCC-----CCeeeEEEccCC
Q 014755 76 SLTQPEWTCKIDEGLA-GIAYARWSPDSRHILTTSD-FQ----LRLTVWSLLNTACVHVQSPK-----HASKGVAFTQDG 144 (419)
Q Consensus 76 ~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~-~~----~~i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~ 144 (419)
|..+.++...-..... .-.+++..++++.++.++. ++ ..+.+||..+++...+.... ..-....+..++
T Consensus 271 d~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~ 350 (656)
T 1k3i_A 271 DSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDN 350 (656)
T ss_dssp EGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTC
T ss_pred cCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCC
Confidence 9988865533221211 1245566789998888883 31 26999999998876642111 111112223455
Q ss_pred CEEEEEeecC------CCCeEEEEeccCCeEEEEEecccc---------ceeeeeECC-CCCeEEEEcCCC--C-----c
Q 014755 145 KFAAICTRRD------CKDYINLLSCHTWEIMGVFAVDTL---------DLADIEWSP-DDSAIVIWDSPL--E-----Y 201 (419)
Q Consensus 145 ~~l~~~~~~~------~~g~v~i~d~~~~~~~~~~~~~~~---------~v~~~~~~~-~~~~l~~~~~~~--~-----~ 201 (419)
..++.++.++ ....+..||..+............ .-.++.|.. +++.+++ .+.. + .
T Consensus 351 ~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~-GG~~~~~~~~~~~ 429 (656)
T 1k3i_A 351 HAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTF-GGSPDYQDSDATT 429 (656)
T ss_dssp SCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEE-CCBSSSSSSBCCC
T ss_pred ceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEE-eCCCCCCCCCcCC
Confidence 5555554431 124678899887654433322221 223444433 4555544 2211 1 1
Q ss_pred ---eEEEEcCCCceEEEEe--ecCCCCceeEEEEccCCCeEEEEEec-----------CcEEEEEcCCc
Q 014755 202 ---KVLIYSPDGRCLLKYQ--AYESGLGVKSISWSPCGQFLAVGSYD-----------QTLRVLNHLTW 254 (419)
Q Consensus 202 ---~i~~~d~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~~d-----------~~i~v~d~~~~ 254 (419)
.+.+||.....-.... .......-.+++..|+++.++.|+.+ ..+.+||..+.
T Consensus 430 ~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~ 498 (656)
T 1k3i_A 430 NAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD 498 (656)
T ss_dssp CEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT
T ss_pred cceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC
Confidence 6888888333333332 11111123455677899999998864 35777887654
No 269
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.15 E-value=1.3e-07 Score=83.98 Aligned_cols=238 Identities=11% Similarity=0.040 Sum_probs=145.0
Q ss_pred cccCeEEcC-CCCEEEEEe-CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCC----eEEEEEccCCcc
Q 014755 9 QTGPSCFSP-NARYIAVAV-DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRL----MIQAWSLTQPEW 82 (419)
Q Consensus 9 ~~~~~~~s~-d~~~la~~~-~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g----~i~iw~~~~~~~ 82 (419)
....++++| ++..|.++. .+.|+.+|+.++++..+.........++|+++|++|+++....+ .+..++. .+..
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCce
Confidence 334489998 466677665 47899999998877776666667899999999997777654212 3444443 3332
Q ss_pred e--eeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEe-c-cCCCCeeeEEEccCCCEEEEEeecCCCCe
Q 014755 83 T--CKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHV-Q-SPKHASKGVAFTQDGKFAAICTRRDCKDY 158 (419)
Q Consensus 83 ~--~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~-~-~~~~~~~~~~~~~~~~~l~~~~~~~~~g~ 158 (419)
. ..+. .......+++.|++..|+++....+.|..++..++....+ . ........++|+|++++|+++... .+.
T Consensus 217 ~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~--~~~ 293 (430)
T 3tc9_A 217 KVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN--QHY 293 (430)
T ss_dssp CSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETT--TTE
T ss_pred eeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECC--CCE
Confidence 2 2232 2334577889994444665554444999999988766332 2 222346889999999977777644 368
Q ss_pred EEEEeccC--CeE--EEEEecc-------c--------ccee-eeeEC--------CCCCeEEEEcCCCCceEEEEcCCC
Q 014755 159 INLLSCHT--WEI--MGVFAVD-------T--------LDLA-DIEWS--------PDDSAIVIWDSPLEYKVLIYSPDG 210 (419)
Q Consensus 159 v~i~d~~~--~~~--~~~~~~~-------~--------~~v~-~~~~~--------~~~~~l~~~~~~~~~~i~~~d~~~ 210 (419)
|+.++.+. ++. ...+.+. . .... .++.. +++ .|++++. ..+.|+.++.+|
T Consensus 294 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g-~lyvaD~-~n~~I~~i~~~G 371 (430)
T 3tc9_A 294 ILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEY-DFYFCDR-ENHCIRILTPQG 371 (430)
T ss_dssp EEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCE-EEEEEEG-GGTEEEEECTTS
T ss_pred EEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCC-eEEEEEC-CCcEEEEECCCC
Confidence 99987653 222 1122111 0 0112 34432 223 4555443 467899999877
Q ss_pred ceEEEEeec----C---C--------CCceeEEEEccC-CCeEEEEEecCcEEEEEcC
Q 014755 211 RCLLKYQAY----E---S--------GLGVKSISWSPC-GQFLAVGSYDQTLRVLNHL 252 (419)
Q Consensus 211 ~~~~~~~~~----~---~--------~~~v~~~~~s~~-~~~l~~~~~d~~i~v~d~~ 252 (419)
......... . . ......++++|+ +.++++-.....|+.++++
T Consensus 372 ~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 372 RVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred cEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 544333210 0 0 125789999995 5555555556778887754
No 270
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.15 E-value=1.8e-07 Score=86.32 Aligned_cols=199 Identities=12% Similarity=0.038 Sum_probs=118.8
Q ss_pred CCeEEEEeccCCeEEEEEccCCcceeeeecCCcc-E--------eEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-e
Q 014755 59 SEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAG-I--------AYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-V 128 (419)
Q Consensus 59 ~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~-v--------~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~ 128 (419)
+..+++++.. +.|.-+|..+|+.+.+....... . ..++. .+..+++++.++ .|..+|.++|+.+. .
T Consensus 68 ~g~vyv~~~~-~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg-~l~AlD~~TG~~~W~~ 143 (582)
T 1flg_A 68 DGVIYVTASY-SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDA-SVVALNKNTGKVVWKK 143 (582)
T ss_dssp TTEEEEEETT-TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTT-EEEEEESSSCCEEEEE
T ss_pred CCEEEEEcCC-CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCC-EEEEEECCCCCEEeee
Confidence 3455555544 35999999999887666443211 0 11222 345677777776 99999999998776 2
Q ss_pred ccCCC----Ce-eeEEEccC---CC-EEEEEeec---CCCCeEEEEeccCCeEEEEEeccccce----------------
Q 014755 129 QSPKH----AS-KGVAFTQD---GK-FAAICTRR---DCKDYINLLSCHTWEIMGVFAVDTLDL---------------- 180 (419)
Q Consensus 129 ~~~~~----~~-~~~~~~~~---~~-~l~~~~~~---~~~g~v~i~d~~~~~~~~~~~~~~~~v---------------- 180 (419)
..... .+ ....+..+ ++ .++++... ..++.|+-+|.++++.+-........+
T Consensus 144 ~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~ 223 (582)
T 1flg_A 144 KFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKA 223 (582)
T ss_dssp ECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTC
T ss_pred cCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCccccccccccc
Confidence 22210 11 11222222 33 45554421 113799999999998776543211000
Q ss_pred -------------------------eeeeECCCCCeEEEEcCC-----------C-------C----ceEEEEcC-CCce
Q 014755 181 -------------------------ADIEWSPDDSAIVIWDSP-----------L-------E----YKVLIYSP-DGRC 212 (419)
Q Consensus 181 -------------------------~~~~~~~~~~~l~~~~~~-----------~-------~----~~i~~~d~-~~~~ 212 (419)
..+++.|+...+++.... . + +.|..+|. +|+.
T Consensus 224 ~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~ 303 (582)
T 1flg_A 224 PSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEV 303 (582)
T ss_dssp TTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCE
T ss_pred ccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCE
Confidence 124555666677664321 1 2 68999999 9998
Q ss_pred EEEEeecCCCC----ceeE-EEEc---cCCC---eEEEEEecCcEEEEEcCCceeeeeec
Q 014755 213 LLKYQAYESGL----GVKS-ISWS---PCGQ---FLAVGSYDQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 213 ~~~~~~~~~~~----~v~~-~~~s---~~~~---~l~~~~~d~~i~v~d~~~~~~~~~~~ 261 (419)
+-.++...+.. .+.. +.+. .+|+ .++.++.+|.++++|..+|+.+..+.
T Consensus 304 ~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 363 (582)
T 1flg_A 304 KWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFP 363 (582)
T ss_dssp EEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccc
Confidence 88876532210 1111 2222 4674 78888999999999999999987765
No 271
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.14 E-value=1.1e-07 Score=75.84 Aligned_cols=193 Identities=12% Similarity=0.062 Sum_probs=128.8
Q ss_pred cEEEEeecCc--ceeEEEEecCCCeEEEEecc-CCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeE
Q 014755 39 KVVQLFSCLD--KISYIEWALDSEYILCGLYK-RLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRL 115 (419)
Q Consensus 39 ~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~~-~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i 115 (419)
+++..+.|.. ....+.|++ +.+..+.+.+ ++.|+.+|+.+++.+..+.... ........+.+..|+......+.+
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~-~~fgeGi~~~~~~ly~ltw~~~~v 87 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPP-PYFGAGIVAWRDRLIQLTWRNHEG 87 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEE
T ss_pred EEEEEcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCC-CcceeEEEEeCCEEEEEEeeCCEE
Confidence 4666777764 466899986 4444444432 2489999999999887775433 222233333466777776555599
Q ss_pred EEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccc-----cceeeeeECCCC
Q 014755 116 TVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDT-----LDLADIEWSPDD 189 (419)
Q Consensus 116 ~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~-----~~v~~~~~~~~~ 189 (419)
.++|.++.+.+. +.... .-..+ .+++..|+.+..+ +.|.++|..+.+.+..+.... ..++.+.+. +|
T Consensus 88 ~v~D~~tl~~~~ti~~~~-~Gwgl--t~dg~~L~vSdgs---~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G 160 (243)
T 3mbr_X 88 FVYDLATLTPRARFRYPG-EGWAL--TSDDSHLYMSDGT---AVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NG 160 (243)
T ss_dssp EEEETTTTEEEEEEECSS-CCCEE--EECSSCEEEECSS---SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred EEEECCcCcEEEEEeCCC-CceEE--eeCCCEEEEECCC---CeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CC
Confidence 999999998887 44332 22344 4677777776543 799999999998888776532 234556665 55
Q ss_pred CeEEEEcCCCCceEEEEcC-CCceEEEEeecC-----------CCCceeEEEEccCCCeEEEEEe
Q 014755 190 SAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYE-----------SGLGVKSISWSPCGQFLAVGSY 242 (419)
Q Consensus 190 ~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~-----------~~~~v~~~~~s~~~~~l~~~~~ 242 (419)
+..+- .-....|.+.|+ +|+.+..+.... .....+.++++|+++.|...+.
T Consensus 161 ~lyan--vw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 161 ELLAN--VWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEEE--ETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEEEE--ECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 53332 334679999999 999888886431 1235689999998877776664
No 272
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.14 E-value=6.1e-07 Score=77.45 Aligned_cols=197 Identities=11% Similarity=-0.043 Sum_probs=132.8
Q ss_pred eeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-e
Q 014755 50 ISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-V 128 (419)
Q Consensus 50 v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~ 128 (419)
..|.+..+ ..+|+.+.. ..|+..++...... .+......+..++|.+.+..|+.+....+.|..+++.++.... +
T Consensus 36 ~~C~~~~~-~~~ll~~~~--~~I~~i~~~g~~~~-~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~ 111 (349)
T 3v64_C 36 RSCKALGP-EPVLLFANR--IDIRQVLPHRSEYT-LLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV 111 (349)
T ss_dssp SCEEESSS-CCEEEEECB--SCEEEECTTSCCEE-EEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred Cccccccc-CceeEeecc--cceEEEeCCCCeeE-EeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEE
Confidence 34555555 345665543 46888888765543 3334445578999998888888877655599999998765444 2
Q ss_pred ccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC
Q 014755 129 QSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP 208 (419)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~ 208 (419)
.........+++.+.+..|+.+... .+.|.+.+++.......+.........+++.|.+..|++.+....+.|+.+++
T Consensus 112 ~~~~~~p~glavd~~~g~ly~~d~~--~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~ 189 (349)
T 3v64_C 112 STGLESPGGLAVDWVHDKLYWTDSG--TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSM 189 (349)
T ss_dssp CSSCSCCCEEEEETTTTEEEEEETT--TTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred eCCCCCccEEEEecCCCeEEEEcCC--CCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeC
Confidence 2223445789999877777666543 36899999875443333333335678999999888888877554488999999
Q ss_pred CCceEEEEeecCCCCceeEEEEccCCCeEEEEE-ecCcEEEEEcCC
Q 014755 209 DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGS-YDQTLRVLNHLT 253 (419)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~v~d~~~ 253 (419)
+|.....+.. ........++++|++..|+.+. ..+.|..+|+..
T Consensus 190 dG~~~~~~~~-~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 190 DGSGRRIIAD-THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp TSCSCEESCC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCCCcEEEEE-CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 7765554422 1222588999998777666654 456788888754
No 273
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=99.14 E-value=1.2e-08 Score=97.57 Aligned_cols=238 Identities=10% Similarity=-0.008 Sum_probs=134.8
Q ss_pred CeEEc-CCCCEEEEEeC--C----eEEEEecCCC-cEEEEeecCcceeEEEEecCCCeEEEEeccC----CeEEEEEccC
Q 014755 12 PSCFS-PNARYIAVAVD--Y----RLVVRDAHSF-KVVQLFSCLDKISYIEWALDSEYILCGLYKR----LMIQAWSLTQ 79 (419)
Q Consensus 12 ~~~~s-~d~~~la~~~~--~----~i~i~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~----g~i~iw~~~~ 79 (419)
..+|| |||++||++.+ | +|+++|+.++ +.+.. .-......++|+|||+.|+....++ ..|+++++.+
T Consensus 178 ~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt 256 (751)
T 2xe4_A 178 EVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGK 256 (751)
T ss_dssp EEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTS
T ss_pred eeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-cccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCC
Confidence 37899 99999998852 2 3999999998 63211 0011245789999999999887652 2688888877
Q ss_pred Ccce--eeee-cCCccEeEEEECCCCCEEEEEecC--CCeEEEEEcCCC--eE--EEecc-CCCCeeeEEEccCCCEEEE
Q 014755 80 PEWT--CKID-EGLAGIAYARWSPDSRHILTTSDF--QLRLTVWSLLNT--AC--VHVQS-PKHASKGVAFTQDGKFAAI 149 (419)
Q Consensus 80 ~~~~--~~~~-~~~~~v~~~~~~~~~~~l~~~~~~--~~~i~iwd~~~~--~~--~~~~~-~~~~~~~~~~~~~~~~l~~ 149 (419)
++.. ..+. ........+.|+|||++|+..+.. ...|.++|+.++ +. ..+.. .......+.|+ +++.|+.
T Consensus 257 ~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~-~g~~l~~ 335 (751)
T 2xe4_A 257 LQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMH-GTSHLVI 335 (751)
T ss_dssp CGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEE-TTTEEEE
T ss_pred CchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeee-eCCEEEE
Confidence 6432 2222 222345678999999998877532 337888999875 33 33322 22333444443 3666666
Q ss_pred EeecC--CCCeEEEEeccCCeEEEE-Eecccc--ceeeeeECCCCCeEEEEcCCCC--ceEEEEcC-------CCce-EE
Q 014755 150 CTRRD--CKDYINLLSCHTWEIMGV-FAVDTL--DLADIEWSPDDSAIVIWDSPLE--YKVLIYSP-------DGRC-LL 214 (419)
Q Consensus 150 ~~~~~--~~g~v~i~d~~~~~~~~~-~~~~~~--~v~~~~~~~~~~~l~~~~~~~~--~~i~~~d~-------~~~~-~~ 214 (419)
.+..+ ....|..+++.++..... +..+.. .+..+.+. +..+++. ...+ ..|+++++ .+.. ..
T Consensus 336 ~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~--~~~lv~~-~~~~g~~~l~~~dl~~~~~~~~~g~~~~ 412 (751)
T 2xe4_A 336 LTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR--SNYLVVA-GRRAGLTRIWTMMADSQDGVFKAGTGLR 412 (751)
T ss_dssp EECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC--SSEEEEE-EEETTEEEEEEEECCTTTSCCCTTTCCE
T ss_pred EeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE--CCEEEEE-EEeCCEEEEEEEecccccccccCCccce
Confidence 55442 345788888875211122 222222 34455554 4555442 2223 45777774 3333 44
Q ss_pred EEeecCCCCceeEEEE----ccCCCeE-EEEEec---CcEEEEEcCCce
Q 014755 215 KYQAYESGLGVKSISW----SPCGQFL-AVGSYD---QTLRVLNHLTWK 255 (419)
Q Consensus 215 ~~~~~~~~~~v~~~~~----s~~~~~l-~~~~~d---~~i~v~d~~~~~ 255 (419)
.+..... ..+..+.+ ++++..+ ++.+.. ..+..+|+.+++
T Consensus 413 ~l~l~~~-~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 460 (751)
T 2xe4_A 413 EVVMEEP-IFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHS 460 (751)
T ss_dssp ECCCCCS-SCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCC
T ss_pred EECCCCc-eeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 4432221 12333332 3466544 333332 467788887665
No 274
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.13 E-value=3.5e-07 Score=86.98 Aligned_cols=238 Identities=10% Similarity=-0.037 Sum_probs=163.9
Q ss_pred CEEEEEeCCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC----cceeeeecCCccEeE
Q 014755 20 RYIAVAVDYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP----EWTCKIDEGLAGIAY 95 (419)
Q Consensus 20 ~~la~~~~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~----~~~~~~~~~~~~v~~ 95 (419)
.+|+.+....|+..++...+...+......+..|+|.+....|+.+....+.|+.+++... .....+.........
T Consensus 396 p~Ll~an~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~G 475 (791)
T 3m0c_C 396 AYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 475 (791)
T ss_dssp CEEEEECBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred cccccccccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcce
Confidence 4667777777888898887777777777788999999977777776655578999998753 223333334456778
Q ss_pred EEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEe
Q 014755 96 ARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFA 174 (419)
Q Consensus 96 ~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~ 174 (419)
|++.+.+..|+.+....+.|.+.++....... +.........|++.|.+.+|+.+.... .+.|...++........+.
T Consensus 476 LAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~-~~~I~~~~~dG~~~~~lv~ 554 (791)
T 3m0c_C 476 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT-PAKIKKGGLNGVDIYSLVT 554 (791)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSS-SCEEEEEETTSCCEEEEEC
T ss_pred eeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCC-CCeEEEEecCCCceEEEEe
Confidence 99998888888887666699999998766554 333445578999999877777765421 2579999987554444444
Q ss_pred ccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeec-CCCCceeEEEEccCCCeEEEE-EecCcEEEEEcC
Q 014755 175 VDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAY-ESGLGVKSISWSPCGQFLAVG-SYDQTLRVLNHL 252 (419)
Q Consensus 175 ~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~-~~d~~i~v~d~~ 252 (419)
..-.....|++.+.+..|++++.. ...|..++++|.....+... .......+|++. +.+|+.. ...+.|...|..
T Consensus 555 ~~l~~P~GLavD~~~~~LYwaD~~-~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~~~dk~ 631 (791)
T 3m0c_C 555 ENIQWPNGITLDLLSGRLYWVDSK-LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRL 631 (791)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETT-TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETT
T ss_pred CCCCCceEEEEecCCCeEEEEeCC-CCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEEEEeCC
Confidence 334578899999988888887743 67899999977666555432 111235566664 3345444 455788888887
Q ss_pred Cceeeeeec
Q 014755 253 TWKTFAEFM 261 (419)
Q Consensus 253 ~~~~~~~~~ 261 (419)
+++.+..+.
T Consensus 632 tG~~~~~l~ 640 (791)
T 3m0c_C 632 TGSDVNLLA 640 (791)
T ss_dssp TCCCCEEEE
T ss_pred CCcceEEee
Confidence 877665553
No 275
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.13 E-value=1.4e-06 Score=84.21 Aligned_cols=318 Identities=10% Similarity=-0.048 Sum_probs=192.7
Q ss_pred eEEcCCCCEEEEEeCCeEEEEecCCCcEEEEee--------cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCccee
Q 014755 13 SCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFS--------CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTC 84 (419)
Q Consensus 13 ~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~--------~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~ 84 (419)
+...++|++.+. ..+.|.+||..+++...... ....|.++...++|.+.+ |+.. +-|.+++..+++...
T Consensus 216 i~~d~~g~lwig-t~~Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-~Gl~~~~~~~~~~~~ 292 (781)
T 3v9f_A 216 IYKDTNGNIWIG-TSKGLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWI-ATEL-NGIMILDLQQNQFLL 292 (781)
T ss_dssp EEECTTCCEEEE-ETTEEEEEETTTTEEEC-----------CCCCEEEEEECTTSEEEE-EESS-SCEEEEETTCC----
T ss_pred EEEcCCCCEEEE-eCCcHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCEEE-EeCC-CCeEEECCCCCeeee
Confidence 455667765554 43479999988776544321 235699999888886554 4433 458889987765332
Q ss_pred eee--------------cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEecc----------CCCCeeeEEE
Q 014755 85 KID--------------EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQS----------PKHASKGVAF 140 (419)
Q Consensus 85 ~~~--------------~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~----------~~~~~~~~~~ 140 (419)
... .....|.++...++|. |..+..++ -|..++..++....+.. ....|.++..
T Consensus 293 ~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~ 370 (781)
T 3v9f_A 293 PEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGG-GINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCD 370 (781)
T ss_dssp -----CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSS-CEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEE
T ss_pred eeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCC-eEEEeCCCCCcceeeccCccccccCCCCCcceEEEEE
Confidence 111 1234689999988887 44555444 58888887665444321 2245688888
Q ss_pred ccCCCEEEEEeecCCCCeEEEEeccCCeEEEEE---eccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEe
Q 014755 141 TQDGKFAAICTRRDCKDYINLLSCHTWEIMGVF---AVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQ 217 (419)
Q Consensus 141 ~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~ 217 (419)
.++|.. .+|+.+ +-|..+|..+++..... ......|.++...+++...+. +.++.+..++........+.
T Consensus 371 d~~g~l-Wigt~~---~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWig---t~~~Gl~~~~~~~~~~~~~~ 443 (781)
T 3v9f_A 371 DGQGKL-WIGTDG---GGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFG---TYLGNISYYNTRLKKFQIIE 443 (781)
T ss_dssp CTTSCE-EEEEBS---SCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEE---ETTEEEEEECSSSCEEEECC
T ss_pred cCCCCE-EEEeCC---CcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEE---eccCCEEEEcCCCCcEEEec
Confidence 877754 455543 46888998764432211 122356888888888876553 44567999998444444443
Q ss_pred ec-CCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccc
Q 014755 218 AY-ESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFI 296 (419)
Q Consensus 218 ~~-~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (419)
.. .....|.++...++|++.+ |+. +-|..||..+++..........
T Consensus 444 ~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~------------------------------- 490 (781)
T 3v9f_A 444 LEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNS------------------------------- 490 (781)
T ss_dssp STTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTS-------------------------------
T ss_pred cCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCccc-------------------------------
Confidence 21 1223688998888886444 444 4688898776543221110000
Q ss_pred cccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc--
Q 014755 297 QGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV-- 374 (419)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~-- 374 (419)
......|.++...++|++.+.... +-|..||..+++......
T Consensus 491 ---------------------------------~~~~~~i~~i~~d~~g~lWigt~~---~Gl~~~~~~~~~~~~~~~~~ 534 (781)
T 3v9f_A 491 ---------------------------------QLLENFVRSIAQDSEGRFWIGTFG---GGVGIYTPDMQLVRKFNQYE 534 (781)
T ss_dssp ---------------------------------SCSCSCEEEEEECTTCCEEEEESS---SCEEEECTTCCEEEEECTTT
T ss_pred ---------------------------------ccccceeEEEEEcCCCCEEEEEcC---CCEEEEeCCCCeEEEccCCC
Confidence 001234888999999987665543 447788887766554431
Q ss_pred --cCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEEe
Q 014755 375 --QKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCVS 412 (419)
Q Consensus 375 --~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~ 412 (419)
....|.++...++|.+.++ +.+|-+..|+..+++...
T Consensus 535 ~l~~~~i~~i~~d~~g~lWi~-T~~Glv~~~d~~~~~~~~ 573 (781)
T 3v9f_A 535 GFCSNTINQIYRSSKGQMWLA-TGEGLVCFPSARNFDYQV 573 (781)
T ss_dssp TCSCSCEEEEEECTTSCEEEE-ETTEEEEESCTTTCCCEE
T ss_pred CCCCCeeEEEEECCCCCEEEE-ECCCceEEECCCCCcEEE
Confidence 2457899999999986654 446655889988765543
No 276
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.13 E-value=1.3e-07 Score=80.36 Aligned_cols=206 Identities=7% Similarity=-0.028 Sum_probs=124.5
Q ss_pred CcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCC-CeEE
Q 014755 38 FKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQ-LRLT 116 (419)
Q Consensus 38 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~~i~ 116 (419)
.+.+..+........++|+++|+++++-.. .+.|..||.+.. ....+ .....+..+++.++|+.+++....+ ..|.
T Consensus 22 ~~~~~~~p~~~~pegia~~~~g~lyv~d~~-~~~I~~~d~~g~-~~~~~-~~~~~p~gia~~~dG~l~vad~~~~~~~v~ 98 (306)
T 2p4o_A 22 AKIITSFPVNTFLENLASAPDGTIFVTNHE-VGEIVSITPDGN-QQIHA-TVEGKVSGLAFTSNGDLVATGWNADSIPVV 98 (306)
T ss_dssp EEEEEEECTTCCEEEEEECTTSCEEEEETT-TTEEEEECTTCC-EEEEE-ECSSEEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred ceEeEeCCCCCCcceEEECCCCCEEEEeCC-CCeEEEECCCCc-eEEEE-eCCCCceeEEEcCCCcEEEEeccCCcceEE
Confidence 334444443456789999999985555544 479999998653 33233 2345688999999999655543322 2577
Q ss_pred EEEcCCCeEEEeccC--CCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeE-EEEEec---------cccceeeee
Q 014755 117 VWSLLNTACVHVQSP--KHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEI-MGVFAV---------DTLDLADIE 184 (419)
Q Consensus 117 iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~-~~~~~~---------~~~~v~~~~ 184 (419)
.++..+++...+... ......++..+++. +++... ..+.|+.+|..+++. +..... .-.....+
T Consensus 99 ~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~-~~v~d~--~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi- 174 (306)
T 2p4o_A 99 SLVKSDGTVETLLTLPDAIFLNGITPLSDTQ-YLTADS--YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL- 174 (306)
T ss_dssp EEECTTSCEEEEEECTTCSCEEEEEESSSSE-EEEEET--TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE-
T ss_pred EEcCCCCeEEEEEeCCCccccCcccccCCCc-EEEEEC--CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc-
Confidence 778888876553221 12234555555544 444332 137899999876532 111110 11123444
Q ss_pred ECCCCCeEEEEcCCCCceEEEEcCC--Cce--EEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCcee
Q 014755 185 WSPDDSAIVIWDSPLEYKVLIYSPD--GRC--LLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKT 256 (419)
Q Consensus 185 ~~~~~~~l~~~~~~~~~~i~~~d~~--~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~ 256 (419)
+|+++.+++.+. ..+.|+.|+++ ++. ...+... . ....++++++|+++++....+.|.++|.. ++.
T Consensus 175 -s~dg~~lyv~d~-~~~~I~~~~~~~~g~~~~~~~~~~~-~--~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~ 244 (306)
T 2p4o_A 175 -KRFGNFLYVSNT-EKMLLLRIPVDSTDKPGEPEIFVEQ-T--NIDDFAFDVEGNLYGATHIYNSVVRIAPD-RST 244 (306)
T ss_dssp -EEETTEEEEEET-TTTEEEEEEBCTTSCBCCCEEEEES-C--CCSSEEEBTTCCEEEECBTTCCEEEECTT-CCE
T ss_pred -CcCCCEEEEEeC-CCCEEEEEEeCCCCCCCccEEEecc-C--CCCCeEECCCCCEEEEeCCCCeEEEECCC-CCE
Confidence 788888887663 46899999984 322 1222211 1 46789999999876666667889999864 443
No 277
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.12 E-value=6.8e-07 Score=78.32 Aligned_cols=196 Identities=11% Similarity=-0.038 Sum_probs=132.8
Q ss_pred eEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-ec
Q 014755 51 SYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQ 129 (419)
Q Consensus 51 ~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~ 129 (419)
.+.+..+ ..+|+.+.. ..|+.+++........+ .....+..++|.+.+..|+.+....+.|..+++.++.... +.
T Consensus 80 ~C~~~~~-~~~l~~~~~--~~I~~i~~~~~~~~~~~-~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~ 155 (386)
T 3v65_B 80 SCKALGP-EPVLLFANR--IDIRQVLPHRSEYTLLL-NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS 155 (386)
T ss_dssp CEEECSS-CCEEEEECB--SCEEEECTTSCCCEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC
T ss_pred eECCccc-cceeEeecC--ccceeeccCCCcEEEEe-cCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe
Confidence 3444444 345555543 47899998776554333 4445678999998888888877655699999998876544 33
Q ss_pred cCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCC
Q 014755 130 SPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPD 209 (419)
Q Consensus 130 ~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~ 209 (419)
........+++.+.+..|+.+... .+.|.+.+++.......+.........+++.|.+..|++.+....+.|+.++++
T Consensus 156 ~~~~~p~glavd~~~g~lY~~d~~--~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 233 (386)
T 3v65_B 156 TGLESPGGLAVDWVHDKLYWTDSG--TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 233 (386)
T ss_dssp SSCSCCCCEEEETTTTEEEEEETT--TTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCCCCccEEEEEeCCCeEEEEcCC--CCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC
Confidence 233345789999877777766543 368999888754433333333356789999998888888775544889999997
Q ss_pred CceEEEEeecCCCCceeEEEEccCCCeEEEEE-ecCcEEEEEcCC
Q 014755 210 GRCLLKYQAYESGLGVKSISWSPCGQFLAVGS-YDQTLRVLNHLT 253 (419)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~v~d~~~ 253 (419)
|.....+... .......++++|++..|+.+. ..+.|..+|+..
T Consensus 234 G~~~~~~~~~-~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 234 GSGRRIIADT-HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp SCSCEEEECS-SCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred CCCcEEEEEC-CCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 7665555322 222588999998777666654 456788888653
No 278
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.11 E-value=5.7e-08 Score=91.68 Aligned_cols=120 Identities=7% Similarity=0.019 Sum_probs=81.4
Q ss_pred eEEEEec-CCCeEEEEeccC----------CeEEEEEccCCcceee--eec-CCccEeEEEECCCCCEEEEEecCCCeEE
Q 014755 51 SYIEWAL-DSEYILCGLYKR----------LMIQAWSLTQPEWTCK--IDE-GLAGIAYARWSPDSRHILTTSDFQLRLT 116 (419)
Q Consensus 51 ~~~~~s~-~~~~l~~~~~~~----------g~i~iw~~~~~~~~~~--~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~i~ 116 (419)
.+.++.| +++.++.|+.+. ..+.+||+.+++.... +.. +.....++++..+++.+++++.+...+.
T Consensus 189 ~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 189 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS 268 (656)
T ss_dssp SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred eeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceE
Confidence 3667787 888888887532 1588999998875432 211 2222345778899999999986555899
Q ss_pred EEEcCCCeEEEeccCC-CC-eeeEEEccCCCEEEEEee-cC--CCCeEEEEeccCCeEE
Q 014755 117 VWSLLNTACVHVQSPK-HA-SKGVAFTQDGKFAAICTR-RD--CKDYINLLSCHTWEIM 170 (419)
Q Consensus 117 iwd~~~~~~~~~~~~~-~~-~~~~~~~~~~~~l~~~~~-~~--~~g~v~i~d~~~~~~~ 170 (419)
+||..+++...+.... .. -.+++..++++.+++|+. ++ ....+.+||..+.+..
T Consensus 269 ~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~ 327 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWT 327 (656)
T ss_dssp EEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEE
T ss_pred EecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcce
Confidence 9999998877643222 12 245667779999999883 21 1247999999876543
No 279
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.08 E-value=2.4e-07 Score=82.38 Aligned_cols=158 Identities=9% Similarity=0.068 Sum_probs=102.0
Q ss_pred cEeEEEECC-CCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCC-C-eEEEEeccCCe
Q 014755 92 GIAYARWSP-DSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCK-D-YINLLSCHTWE 168 (419)
Q Consensus 92 ~v~~~~~~~-~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-g-~v~i~d~~~~~ 168 (419)
....++++| ++..|+++... +.|+.+|+.++....+.........+++++++++|+++...+.. . .+..++....-
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBT-EEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTS
T ss_pred CCCEEEECCCCCCeEEEEeCC-CcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCce
Confidence 457899998 46667777665 48999999988776655555667899999999977776653211 1 34444443211
Q ss_pred E-EEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEE-ecCcE
Q 014755 169 I-MGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGS-YDQTL 246 (419)
Q Consensus 169 ~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i 246 (419)
. ...+. .......++++|++..|++.+. ..+.|+.++.++.....+...........++|+|+|++|+.+. ..+.|
T Consensus 217 ~~~~~l~-~~~~p~giavdp~~g~lyv~d~-~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I 294 (430)
T 3tc9_A 217 KVITELT-KGQNCNGAETHPINGELYFNSW-NAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYI 294 (430)
T ss_dssp CSEEEEE-ECSSCCCEEECTTTCCEEEEET-TTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEE
T ss_pred eeeeeec-cCCCceEEEEeCCCCEEEEEEC-CCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEE
Confidence 1 12222 1245678899995445555443 4689999999655443332222222578999999999655554 56788
Q ss_pred EEEEcC
Q 014755 247 RVLNHL 252 (419)
Q Consensus 247 ~v~d~~ 252 (419)
+.++..
T Consensus 295 ~~~~~d 300 (430)
T 3tc9_A 295 LRSDYD 300 (430)
T ss_dssp EEEEEE
T ss_pred EEEeCC
Confidence 888765
No 280
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.06 E-value=3.6e-07 Score=81.22 Aligned_cols=236 Identities=11% Similarity=0.037 Sum_probs=143.6
Q ss_pred ccCeEEcCC--CCEEEEEe-CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEecc----CCeEEEEEccCCcc
Q 014755 10 TGPSCFSPN--ARYIAVAV-DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYK----RLMIQAWSLTQPEW 82 (419)
Q Consensus 10 ~~~~~~s~d--~~~la~~~-~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~----~g~i~iw~~~~~~~ 82 (419)
...++++|+ +..|.++. .+.|+.+|..+++.............++++++|+ |+++... ...+...+...+..
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~ 219 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFT 219 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTC
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCee
Confidence 334899995 45566654 4789999998888877766666789999999999 5544321 11233344332211
Q ss_pred e-eeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeE-EEe-cc-CCCCeeeEEEccCCCEEEEEeecCCCCe
Q 014755 83 T-CKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTAC-VHV-QS-PKHASKGVAFTQDGKFAAICTRRDCKDY 158 (419)
Q Consensus 83 ~-~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~-~~~-~~-~~~~~~~~~~~~~~~~l~~~~~~~~~g~ 158 (419)
. ..+. .......+++.|++..|+.+....+.|+.+|..++.. ..+ .. .......++|+|++++|+++... .+.
T Consensus 220 ~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~--~~~ 296 (433)
T 4hw6_A 220 ERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG--KHC 296 (433)
T ss_dssp CEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETT--TTE
T ss_pred cccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCC--CCE
Confidence 1 1221 2344567889994445665554445899999987765 222 21 12223579999999977777643 368
Q ss_pred EEEEecc--CCeE--EEEEecc---------------ccceeeeeE---------CCCCCeEEEEcCCCCceEEEEcCCC
Q 014755 159 INLLSCH--TWEI--MGVFAVD---------------TLDLADIEW---------SPDDSAIVIWDSPLEYKVLIYSPDG 210 (419)
Q Consensus 159 v~i~d~~--~~~~--~~~~~~~---------------~~~v~~~~~---------~~~~~~l~~~~~~~~~~i~~~d~~~ 210 (419)
|+.++.. ++.. ...+.+. -.....+++ .+++. |++++ ...+.|+.++.+|
T Consensus 297 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~-lyvaD-~~n~~I~~~~~~G 374 (433)
T 4hw6_A 297 IYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD-FYFCD-RDSHTVRVLTPEG 374 (433)
T ss_dssp EEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE-EEEEE-TTTTEEEEECTTS
T ss_pred EEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCc-EEEEE-CCCCEEEEECCCC
Confidence 9998765 2321 1111111 123566888 55554 44544 4478899999877
Q ss_pred ceEEEEeecCC----------------CCceeEEEEc-cCCCeEEEEEecCcEEEEEcC
Q 014755 211 RCLLKYQAYES----------------GLGVKSISWS-PCGQFLAVGSYDQTLRVLNHL 252 (419)
Q Consensus 211 ~~~~~~~~~~~----------------~~~v~~~~~s-~~~~~l~~~~~d~~i~v~d~~ 252 (419)
...... +... ......++++ ++|.++++-...+.|+.++++
T Consensus 375 ~v~t~~-G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 375 RVTTYA-GRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEEEEE-CCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CEEEEE-eCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 544333 2110 1247789999 566666655566788887754
No 281
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.06 E-value=5e-06 Score=73.16 Aligned_cols=188 Identities=11% Similarity=-0.027 Sum_probs=130.5
Q ss_pred CeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCC----eEEE-eccCCCC
Q 014755 60 EYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNT----ACVH-VQSPKHA 134 (419)
Q Consensus 60 ~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~----~~~~-~~~~~~~ 134 (419)
.+|+.+.. ..|+..++....... +......+..++|.+.+..|+.+....+.|+.+++... .... +......
T Consensus 84 ~~ll~~~~--~~I~~i~l~~~~~~~-~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~ 160 (400)
T 3p5b_L 84 AYLFFTNR--HEVRKMTLDRSEYTS-LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA 160 (400)
T ss_dssp CEEEEEET--TEEEEECTTSCSCEE-EECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSC
T ss_pred ceeEEecc--ceeEEEccCCcceeE-eccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCC
Confidence 35665543 589999998765543 33455678899999988888888765558999998762 2222 3334445
Q ss_pred eeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEE
Q 014755 135 SKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLL 214 (419)
Q Consensus 135 ~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~ 214 (419)
...+++.+.+..|+.+... .+.|.+.+++.......+.........+++.|.+..|++.+....+.|...+++|....
T Consensus 161 p~glavD~~~~~lY~~d~~--~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~ 238 (400)
T 3p5b_L 161 PDGLAVDWIHSNIYWTDSV--LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 238 (400)
T ss_dssp EEEEEEETTTTEEEEEETT--TTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCE
T ss_pred cccEEEEecCCceEEEECC--CCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccE
Confidence 6889999877677766543 47899999986655444444445678999999888888877555578999999876665
Q ss_pred EEeecCCCCceeEEEEccCCCeEEEEE-ecCcEEEEEcCC
Q 014755 215 KYQAYESGLGVKSISWSPCGQFLAVGS-YDQTLRVLNHLT 253 (419)
Q Consensus 215 ~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~v~d~~~ 253 (419)
.+... .......+++++++..|+.+. ..+.|..+|+..
T Consensus 239 ~~~~~-~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 239 SLVTE-NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 277 (400)
T ss_dssp EEECS-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEEC-CCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCC
Confidence 55322 222689999999877777664 456788888754
No 282
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.05 E-value=1.6e-08 Score=81.18 Aligned_cols=172 Identities=16% Similarity=0.034 Sum_probs=121.6
Q ss_pred eEEcCCCCEEEEE-e-CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecCC
Q 014755 13 SCFSPNARYIAVA-V-DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEGL 90 (419)
Q Consensus 13 ~~~s~d~~~la~~-~-~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~ 90 (419)
+.|+ ++.|..+ + ++.|+++|+++++.+... -.......-..++++.|......++.+.++|.++.+.+.++....
T Consensus 60 L~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~ 136 (268)
T 3nok_A 60 LVFH--QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYSG 136 (268)
T ss_dssp EEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEECSS
T ss_pred EEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCCC
Confidence 6776 3455544 3 678999999999988776 444554544455677777777677899999999999988886543
Q ss_pred ccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-ec--cCCC---CeeeEEEccCCCEEEEEeecCCCCeEEEEec
Q 014755 91 AGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQ--SPKH---ASKGVAFTQDGKFAAICTRRDCKDYINLLSC 164 (419)
Q Consensus 91 ~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~--~~~~---~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~ 164 (419)
.. ..+ ++|++.|+.+...+ .|.++|.++.+.+. +. ..+. .++.+.|. +|+ |.+.... .+.|.+.|.
T Consensus 137 eG-wGL--t~Dg~~L~vSdGs~-~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~-lyanvw~--s~~I~vIDp 208 (268)
T 3nok_A 137 EG-WGL--CYWNGKLVRSDGGT-MLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGV-IYANIWH--SSDVLEIDP 208 (268)
T ss_dssp CC-CCE--EEETTEEEEECSSS-EEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETT--CSEEEEECT
T ss_pred ce-eEE--ecCCCEEEEECCCC-EEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCE-EEEEECC--CCeEEEEeC
Confidence 22 333 36788888887655 99999999987766 32 2222 23566766 664 5555433 269999999
Q ss_pred cCCeEEEEEeccc-------------cceeeeeECCCCCeEEEE
Q 014755 165 HTWEIMGVFAVDT-------------LDLADIEWSPDDSAIVIW 195 (419)
Q Consensus 165 ~~~~~~~~~~~~~-------------~~v~~~~~~~~~~~l~~~ 195 (419)
++++.+..+.... .-.+.+++.|+++.|++.
T Consensus 209 ~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVT 252 (268)
T 3nok_A 209 ATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMT 252 (268)
T ss_dssp TTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEE
T ss_pred CCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEe
Confidence 9999988876431 245889999998888873
No 283
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.05 E-value=9.9e-08 Score=76.06 Aligned_cols=174 Identities=6% Similarity=-0.005 Sum_probs=122.4
Q ss_pred eEEcCCCCEEEEEeC---CeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecC
Q 014755 13 SCFSPNARYIAVAVD---YRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEG 89 (419)
Q Consensus 13 ~~~s~d~~~la~~~~---~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~ 89 (419)
+.|++ +.+..+.+. ..|+.+|+++++.+....-..........++++.|......++.+.++|.++.+.+.++...
T Consensus 26 L~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~ 104 (243)
T 3mbr_X 26 LFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYP 104 (243)
T ss_dssp EEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECS
T ss_pred EEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCC
Confidence 78886 444444442 47999999999999987755555555555557778877767789999999999998888654
Q ss_pred CccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-ecc--CCC---CeeeEEEccCCCEEEEEeecCCCCeEEEEe
Q 014755 90 LAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQS--PKH---ASKGVAFTQDGKFAAICTRRDCKDYINLLS 163 (419)
Q Consensus 90 ~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~--~~~---~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d 163 (419)
..+ ..+ +++++.|+.+...+ .|.++|.++.+.+. +.. .+. .++.+.+. +|+ +.+.... ...|.+.|
T Consensus 105 ~~G-wgl--t~dg~~L~vSdgs~-~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~-lyanvw~--s~~I~vID 176 (243)
T 3mbr_X 105 GEG-WAL--TSDDSHLYMSDGTA-VIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGE-LLANVWL--TSRIARID 176 (243)
T ss_dssp SCC-CEE--EECSSCEEEECSSS-EEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-EEEEETT--TTEEEEEC
T ss_pred CCc-eEE--eeCCCEEEEECCCC-eEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCE-EEEEECC--CCeEEEEE
Confidence 432 344 45778787776655 99999999977666 222 222 23455654 555 4444432 26999999
Q ss_pred ccCCeEEEEEeccc-------------cceeeeeECCCCCeEEEE
Q 014755 164 CHTWEIMGVFAVDT-------------LDLADIEWSPDDSAIVIW 195 (419)
Q Consensus 164 ~~~~~~~~~~~~~~-------------~~v~~~~~~~~~~~l~~~ 195 (419)
.++++.+..+.... .-.+.++++|+++.|++.
T Consensus 177 p~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVT 221 (243)
T 3mbr_X 177 PASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVT 221 (243)
T ss_dssp TTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEE
T ss_pred CCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEE
Confidence 99999988876331 245889999998888873
No 284
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.02 E-value=4.6e-09 Score=99.16 Aligned_cols=238 Identities=10% Similarity=-0.036 Sum_probs=153.9
Q ss_pred EEEEEeCCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccC----CcceeeeecCCccEeEE
Q 014755 21 YIAVAVDYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQ----PEWTCKIDEGLAGIAYA 96 (419)
Q Consensus 21 ~la~~~~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~----~~~~~~~~~~~~~v~~~ 96 (419)
+|+++....|+..++.+.+...+......+..|+|.+.+..|+.+....+.|+.+++.+ ......+.........+
T Consensus 379 ~ll~~~~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~gl 458 (699)
T 1n7d_A 379 YLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGL 458 (699)
T ss_dssp CBCCCCTTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCE
T ss_pred eEEecCccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceE
Confidence 45555566788888888777666655567789999998888887765557899999875 22222222222345678
Q ss_pred EECCCCCEEEEEecCCCeEEEEEcCCCeEEEec-cCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEec
Q 014755 97 RWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQ-SPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAV 175 (419)
Q Consensus 97 ~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~ 175 (419)
++.+.+..|+.+....+.|.++++.......+. ........++++|.+.+|+.+... ..+.|..+++...........
T Consensus 459 avD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~-~~~~I~~~~~dG~~~~~l~~~ 537 (699)
T 1n7d_A 459 AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWG-TPAKIKKGGLNGVDIYSLVTE 537 (699)
T ss_dssp ECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCS-SSCCEEBCCSSSCCCCEESCS
T ss_pred EEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccC-CCCeEEEEeCCCCCeeEEEeC
Confidence 888766666666544458999998876555432 223456889999987766665432 125788888764322222222
Q ss_pred cccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeec-CCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCc
Q 014755 176 DTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAY-ESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTW 254 (419)
Q Consensus 176 ~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~ 254 (419)
.-.....|+|+|++..|++.+. ..+.|..++++|...+.+... ........+++..+ .++++....+.|..++..++
T Consensus 538 ~l~~PnGlavd~~~~~LY~aD~-~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G 615 (699)
T 1n7d_A 538 NIQWPNGITLDLLSGRLYWVDS-KLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTG 615 (699)
T ss_dssp SCSSCCCEEECTTTCCEEEEET-TTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTE
T ss_pred CCCCccEEEEeccCCEEEEEec-CCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCC
Confidence 2345678999999888888774 468999999976555555322 11123556777554 34444455678999998888
Q ss_pred eeeeeec
Q 014755 255 KTFAEFM 261 (419)
Q Consensus 255 ~~~~~~~ 261 (419)
+.+..+.
T Consensus 616 ~~~~~i~ 622 (699)
T 1n7d_A 616 SDVNLLA 622 (699)
T ss_dssp EEEECCC
T ss_pred CceEEee
Confidence 8877764
No 285
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.01 E-value=1.1e-06 Score=78.15 Aligned_cols=157 Identities=11% Similarity=0.080 Sum_probs=98.1
Q ss_pred cEeEEEECCC--CCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCC--CCeEEEEeccCC
Q 014755 92 GIAYARWSPD--SRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDC--KDYINLLSCHTW 167 (419)
Q Consensus 92 ~v~~~~~~~~--~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~g~v~i~d~~~~ 167 (419)
....++|.|+ +..|+.+... +.|+.+|+.+++...+.........++++++++ |+++..... ...+..++...+
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGT
T ss_pred CCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCC
Confidence 4678999984 5566666554 489999999888877655556679999999999 555543210 012444443322
Q ss_pred eE-EEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEE-ecC
Q 014755 168 EI-MGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGS-YDQ 244 (419)
Q Consensus 168 ~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~ 244 (419)
.. ...+. .......+++.|++..|.+.+ ..++.|+.++. ++.....+...........++|+|++++|+.+. ..+
T Consensus 218 ~~~~~~~~-~~~~P~giavd~~~G~lyv~d-~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~ 295 (433)
T 4hw6_A 218 FTERLSLC-NARGAKTCAVHPQNGKIYYTR-YHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKH 295 (433)
T ss_dssp TCCEEEEE-ECSSBCCCEECTTTCCEEECB-TTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTT
T ss_pred eecccccc-ccCCCCEEEEeCCCCeEEEEE-CCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCC
Confidence 11 01111 234467789999544555543 34678999999 476533332222222345799999998665554 457
Q ss_pred cEEEEEcC
Q 014755 245 TLRVLNHL 252 (419)
Q Consensus 245 ~i~v~d~~ 252 (419)
.|+.++..
T Consensus 296 ~I~~~~~d 303 (433)
T 4hw6_A 296 CIYRVDYN 303 (433)
T ss_dssp EEEEEEBC
T ss_pred EEEEEeCC
Confidence 88888765
No 286
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.99 E-value=3.3e-06 Score=71.67 Aligned_cols=188 Identities=12% Similarity=-0.070 Sum_probs=125.5
Q ss_pred eEEEEeccCCeEEEEEccCCc-ceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeE--EEeccCCCCeee
Q 014755 61 YILCGLYKRLMIQAWSLTQPE-WTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTAC--VHVQSPKHASKG 137 (419)
Q Consensus 61 ~l~~~~~~~g~i~iw~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~--~~~~~~~~~~~~ 137 (419)
+|+.+.. ..|+..+++... ....+......+..++|.+.+..|+.+....+.|..+++.++.. ..+...-.....
T Consensus 6 ~ll~~~~--~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~g 83 (318)
T 3sov_A 6 LLLYANR--RDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDG 83 (318)
T ss_dssp EEEEECE--EEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCE
T ss_pred EEEEEcc--CeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccE
Confidence 5566543 579999998764 22222233345778999998778887766555999999887632 112222234578
Q ss_pred EEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEe
Q 014755 138 VAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQ 217 (419)
Q Consensus 138 ~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~ 217 (419)
+++.+.+..|+.+... .+.|.+++++.................+++.|.+..|++.+....+.|+.++++|.....+.
T Consensus 84 lavd~~~g~ly~~d~~--~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~ 161 (318)
T 3sov_A 84 LACDWLGEKLYWTDSE--TNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIII 161 (318)
T ss_dssp EEEETTTTEEEEEETT--TTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEE
T ss_pred EEEEcCCCeEEEEECC--CCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEE
Confidence 9998877677666533 36899999875433222333345678999999888888876555688999999776655543
Q ss_pred ecCCCCceeEEEEccCCCeEEEEE-ecCcEEEEEcCC
Q 014755 218 AYESGLGVKSISWSPCGQFLAVGS-YDQTLRVLNHLT 253 (419)
Q Consensus 218 ~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~v~d~~~ 253 (419)
.. .......++++|++..|+.+. ..+.|..+|+..
T Consensus 162 ~~-~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG 197 (318)
T 3sov_A 162 NS-EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 197 (318)
T ss_dssp CS-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EC-CCCCccEEEEeccCCEEEEEECCCCEEEEEcCCC
Confidence 22 122678999999777666654 456888888753
No 287
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.97 E-value=1.9e-06 Score=69.71 Aligned_cols=200 Identities=9% Similarity=0.121 Sum_probs=131.8
Q ss_pred CcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeee-cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeE
Q 014755 47 LDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKID-EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTAC 125 (419)
Q Consensus 47 ~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~ 125 (419)
.+.+..++|+|++..|++....++.|...|+. ++..+.+. ........+++.+++.++++.-.+ +.+.++++.....
T Consensus 26 ~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~-~~l~~~~v~~~~~ 103 (255)
T 3qqz_A 26 TNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERD-YAIYVISLTPNSE 103 (255)
T ss_dssp CSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTT-TEEEEEEECTTCC
T ss_pred ccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCC-CcEEEEEcCCCCe
Confidence 35799999999888777766556899999987 77776664 233567889999888765554344 4899998875331
Q ss_pred ---EE-ec------cCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEec-cCCeEEEEEec-------cccceeeeeECC
Q 014755 126 ---VH-VQ------SPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSC-HTWEIMGVFAV-------DTLDLADIEWSP 187 (419)
Q Consensus 126 ---~~-~~------~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~-~~~~~~~~~~~-------~~~~v~~~~~~~ 187 (419)
.. .. ........++++|.++.|+++...+ ...|+.|+- .....+..+.. ....+..+++.|
T Consensus 104 i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~-p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp 182 (255)
T 3qqz_A 104 VKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN-PIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQ 182 (255)
T ss_dssp EEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS-SEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEET
T ss_pred eeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcC-CceEEEEcccccCCceeeecchhhccccccCCceeEEEcC
Confidence 12 21 1223348999999998888877642 124555541 01111121211 223578899999
Q ss_pred CCCeEEEEcCCCCceEEEEcCCCceEEEEeecCC-------CCceeEEEEccCCCeEEEEEecCcEEEEEc
Q 014755 188 DDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYES-------GLGVKSISWSPCGQFLAVGSYDQTLRVLNH 251 (419)
Q Consensus 188 ~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-------~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~ 251 (419)
....+++.+ .....+..+|.+|+.+..+..... ......|+|.++|+..+ .++.+.+++|.-
T Consensus 183 ~tg~lliLS-~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyI-vsE~n~~y~f~~ 251 (255)
T 3qqz_A 183 QKNTLLVLS-HESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYI-VSEPNRFYRFTP 251 (255)
T ss_dssp TTTEEEEEE-TTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEE-EETTTEEEEEEC
T ss_pred CCCeEEEEE-CCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEE-EcCCceEEEEEe
Confidence 877666653 456899999999987777765432 12578999999997444 466667777653
No 288
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.95 E-value=2.8e-05 Score=72.30 Aligned_cols=155 Identities=11% Similarity=-0.062 Sum_probs=100.8
Q ss_pred CeEEcCCCCEEEEEe--CCeEEEEecCCCcEEEEe-ecCcceeEEEEecCCCeEEEEecc-CCeEEEEEccCCcceeeee
Q 014755 12 PSCFSPNARYIAVAV--DYRLVVRDAHSFKVVQLF-SCLDKISYIEWALDSEYILCGLYK-RLMIQAWSLTQPEWTCKID 87 (419)
Q Consensus 12 ~~~~s~d~~~la~~~--~~~i~i~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~-~g~i~iw~~~~~~~~~~~~ 87 (419)
.+++.+.++.|+.+. .+.|.+.++.+.....+. ........|++.|.+.+|+.+... .+.|...+++.........
T Consensus 88 GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~ 167 (619)
T 3s94_A 88 GLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIIN 167 (619)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC
T ss_pred eEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEe
Confidence 489999777777775 578999998876554444 344567899999987777666532 3577777776543333333
Q ss_pred cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEe-ccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC
Q 014755 88 EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHV-QSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT 166 (419)
Q Consensus 88 ~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~ 166 (419)
..-.....+++.++++.|+.+....+.|...|+.......+ ........++++..+ .++.+... .+.|...|..+
T Consensus 168 ~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~--~ly~td~~--~~~V~~~d~~t 243 (619)
T 3s94_A 168 SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED--ILYWTDWS--THSILACNKYT 243 (619)
T ss_dssp SSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS--EEEEECTT--TCSEEEEESSS
T ss_pred CCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC--EEEEecCC--CCEEEEEECCC
Confidence 34456789999998888888876555899999887554442 212223357777655 56655433 36788888876
Q ss_pred CeEE
Q 014755 167 WEIM 170 (419)
Q Consensus 167 ~~~~ 170 (419)
++..
T Consensus 244 g~~~ 247 (619)
T 3s94_A 244 GEGL 247 (619)
T ss_dssp CCCC
T ss_pred Cccc
Confidence 6543
No 289
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.93 E-value=1.3e-06 Score=77.63 Aligned_cols=243 Identities=14% Similarity=0.123 Sum_probs=147.7
Q ss_pred cCeEEcC-CCCEEEEEe--CCeEEEEecCCCcEEEEeec----CcceeEEEE-------ecCCCeEEEEeccCC------
Q 014755 11 GPSCFSP-NARYIAVAV--DYRLVVRDAHSFKVVQLFSC----LDKISYIEW-------ALDSEYILCGLYKRL------ 70 (419)
Q Consensus 11 ~~~~~s~-d~~~la~~~--~~~i~i~~~~~~~~~~~~~~----~~~v~~~~~-------s~~~~~l~~~~~~~g------ 70 (419)
..|+|+| ++..|.++. .+.|++.|.+++.+..+... ......|+| +++|+.|+++...++
T Consensus 142 ~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~ 221 (496)
T 3kya_A 142 GRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESP 221 (496)
T ss_dssp EEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEE
T ss_pred CEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCc
Confidence 3499999 466666665 35699999998887776542 235889999 999997777764421
Q ss_pred eEEEEEccC-Ccce-----eeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcC-------CCeE------------
Q 014755 71 MIQAWSLTQ-PEWT-----CKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLL-------NTAC------------ 125 (419)
Q Consensus 71 ~i~iw~~~~-~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~-------~~~~------------ 125 (419)
.|.+++... +... ..+.. -.....++++|++..|+++....+.|..+|+. ++..
T Consensus 222 ~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~ 300 (496)
T 3kya_A 222 SVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTF 300 (496)
T ss_dssp EEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTE
T ss_pred eEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccccc
Confidence 366666443 2332 22322 22446788999777777776655699999997 5543
Q ss_pred -EEe-ccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEecc--CCeEE--EEEecc---c------------ccee-ee
Q 014755 126 -VHV-QSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCH--TWEIM--GVFAVD---T------------LDLA-DI 183 (419)
Q Consensus 126 -~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~--~~~~~--~~~~~~---~------------~~v~-~~ 183 (419)
..+ .........++|+|++++|+++... ...|+.++.. .+... ..+.+. . .... .+
T Consensus 301 ~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~--~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv 378 (496)
T 3kya_A 301 KQLFTIADPSWEFQIFIHPTGKYAYFGVIN--NHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGV 378 (496)
T ss_dssp EEEEECSSSSCCEEEEECTTSSEEEEEETT--TTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEE
T ss_pred ceeEecCCCCCceEEEEcCCCCEEEEEeCC--CCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEE
Confidence 111 1223345899999999977776543 3688886654 33321 122111 0 1123 33
Q ss_pred eEC-------CCCCeEEEEcCCCCceEEEEcCCCceEEEEeecC--------------C--------CCceeEEEEccC-
Q 014755 184 EWS-------PDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYE--------------S--------GLGVKSISWSPC- 233 (419)
Q Consensus 184 ~~~-------~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~--------------~--------~~~v~~~~~s~~- 233 (419)
... +++ .|+++| ...+.|+.++.+|. +.++-+.. . ......++++++
T Consensus 379 ~vd~~~~~~~~~g-~lyVaD-~~N~rIr~i~~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~ 455 (496)
T 3kya_A 379 FVKNPDYTGEEEY-DFYFVD-RLNFCVRKVTPEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVK 455 (496)
T ss_dssp EEECTTCCSSCCE-EEEEEE-GGGTEEEEECTTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTT
T ss_pred EEccccccccCCC-eEEEEE-CCCCEEEEEeCCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCC
Confidence 343 233 455555 34788999998774 44443321 0 124778999996
Q ss_pred CCeEEEEEecCcEEEEEcCCceeeee
Q 014755 234 GQFLAVGSYDQTLRVLNHLTWKTFAE 259 (419)
Q Consensus 234 ~~~l~~~~~d~~i~v~d~~~~~~~~~ 259 (419)
|.++++=.....|+.++++.......
T Consensus 456 g~lyVaD~~N~rIrki~~~~~~~~~~ 481 (496)
T 3kya_A 456 EMFYVHDQVGHTIRTISMEQEENVAG 481 (496)
T ss_dssp TEEEEEETTTTEEEEEEECCCC----
T ss_pred CEEEEEeCCCCEEEEEECCCCccccc
Confidence 66666656677899998876554443
No 290
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.88 E-value=3.1e-06 Score=75.31 Aligned_cols=159 Identities=10% Similarity=0.084 Sum_probs=101.3
Q ss_pred cEeEEEECC-CCCEEEEEecCCCeEEEEEcCCCeEEEeccCC----CCeeeEEE-------ccCCCEEEEEeecCC----
Q 014755 92 GIAYARWSP-DSRHILTTSDFQLRLTVWSLLNTACVHVQSPK----HASKGVAF-------TQDGKFAAICTRRDC---- 155 (419)
Q Consensus 92 ~v~~~~~~~-~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~----~~~~~~~~-------~~~~~~l~~~~~~~~---- 155 (419)
....|+|.| ++..|+++......|++.|++++....+.... .....++| ++++++|+++...+.
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 356899999 46667777665458999999998887743222 24689999 999997777765421
Q ss_pred CCeEEEEeccC-CeEE-----EEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCC--------Cce---------
Q 014755 156 KDYINLLSCHT-WEIM-----GVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPD--------GRC--------- 212 (419)
Q Consensus 156 ~g~v~i~d~~~-~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~--------~~~--------- 212 (419)
...|.+++... ++.. ..+.. -.....++++|++..|++.+. .++.|+.+|+. +..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~-~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~ 297 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSY-EKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP 297 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEET-TTTEEEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred CceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEEC-CCCEEEEEecccccccccCceeecccccccc
Confidence 12366776443 2221 12221 234567889997777776554 46789999985 322
Q ss_pred --EEEEeecCCCCceeEEEEccCCCeEEEE-EecCcEEEEEcC
Q 014755 213 --LLKYQAYESGLGVKSISWSPCGQFLAVG-SYDQTLRVLNHL 252 (419)
Q Consensus 213 --~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~d~~i~v~d~~ 252 (419)
...+...........++|+|+|++|+.+ +....|+.++..
T Consensus 298 g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 298 NTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp TTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred cccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 1222222222357899999999965555 445678886643
No 291
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.83 E-value=3.8e-05 Score=73.18 Aligned_cols=187 Identities=11% Similarity=-0.028 Sum_probs=129.1
Q ss_pred eEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCC----eEEE-eccCCCCe
Q 014755 61 YILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNT----ACVH-VQSPKHAS 135 (419)
Q Consensus 61 ~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~----~~~~-~~~~~~~~ 135 (419)
+|+.+.. ..|+..++...+.. .+......+..++|.+.+..|+.+....+.|+.+++... .... +.......
T Consensus 397 ~Ll~an~--~~Ir~i~l~~~~~~-~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P 473 (791)
T 3m0c_C 397 YLFFTNR--HEVRKMTLDRSEYT-SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 473 (791)
T ss_dssp EEEEECB--SSEEEECTTSCCCE-EEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred ccccccc--cceeEeeccCCcce-eeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCc
Confidence 5555543 46888888766554 333455667899999977778777665558999998763 2222 33234456
Q ss_pred eeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEE
Q 014755 136 KGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLK 215 (419)
Q Consensus 136 ~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~ 215 (419)
..+++.+.++.|+.+... .+.|.+.+++.......+.........|++.|.+..|++.+......|...+++|.....
T Consensus 474 ~GLAvD~~~~~LY~tD~~--~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~ 551 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSV--LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 551 (791)
T ss_dssp CEEEEETTTTEEEEEETT--TTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE
T ss_pred ceeeeeecCCcEEEEecC--CCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEE
Confidence 789999888788777643 479999999865544444444456889999999888888776555789999998877666
Q ss_pred EeecCCCCceeEEEEccCCCeEEEEE-ecCcEEEEEcCC
Q 014755 216 YQAYESGLGVKSISWSPCGQFLAVGS-YDQTLRVLNHLT 253 (419)
Q Consensus 216 ~~~~~~~~~v~~~~~s~~~~~l~~~~-~d~~i~v~d~~~ 253 (419)
+.... ......|++++.+..|+.+. ..+.|..+++..
T Consensus 552 lv~~~-l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 552 LVTEN-IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 589 (791)
T ss_dssp EECSS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEeCC-CCCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence 54322 23689999998777776664 346788888754
No 292
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.77 E-value=1.9e-05 Score=63.95 Aligned_cols=189 Identities=11% Similarity=0.171 Sum_probs=125.3
Q ss_pred cCeEEcCCCCEEEEEe--CCeEEEEecCCCcEEEEee--cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcce---
Q 014755 11 GPSCFSPNARYIAVAV--DYRLVVRDAHSFKVVQLFS--CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWT--- 83 (419)
Q Consensus 11 ~~~~~s~d~~~la~~~--~~~i~i~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~--- 83 (419)
+.++++|+++.|++.. ++.|...|.. ++.++.+. .......|++.+++.++++.- .++.+.++++.....+
T Consensus 30 SGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E-~~~~l~~~~v~~~~~i~~~ 107 (255)
T 3qqz_A 30 SSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDE-RDYAIYVISLTPNSEVKIL 107 (255)
T ss_dssp EEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEET-TTTEEEEEEECTTCCEEEE
T ss_pred ceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEEC-CCCcEEEEEcCCCCeeeee
Confidence 3389999888777765 5678888988 88877664 335688899999887655543 3478999988655421
Q ss_pred eeee------cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC---C---eEEEe-----ccCCCCeeeEEEccCCCE
Q 014755 84 CKID------EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN---T---ACVHV-----QSPKHASKGVAFTQDGKF 146 (419)
Q Consensus 84 ~~~~------~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~---~---~~~~~-----~~~~~~~~~~~~~~~~~~ 146 (419)
.... ........++|.|.++.|+++.+.. ...+|.+.. . ..... ........+++++|....
T Consensus 108 ~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~-p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~ 186 (255)
T 3qqz_A 108 KKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN-PIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNT 186 (255)
T ss_dssp EEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS-SEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTE
T ss_pred eeeccccccccccCCcceEEEeCCCCEEEEEECcC-CceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCe
Confidence 2221 1234468999999998888887655 445555431 1 11110 112335689999998877
Q ss_pred EEEEeecCCCCeEEEEeccCCeEEEEEeccc---------cceeeeeECCCCCeEEEEcCCCCceEEEEcC
Q 014755 147 AAICTRRDCKDYINLLSCHTWEIMGVFAVDT---------LDLADIEWSPDDSAIVIWDSPLEYKVLIYSP 208 (419)
Q Consensus 147 l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~ 208 (419)
+.+.+.. ...+..+|.. ++.+..+.... .....++|.++|+..++ +..+.++.|..
T Consensus 187 lliLS~~--s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv---sE~n~~y~f~~ 251 (255)
T 3qqz_A 187 LLVLSHE--SRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV---SEPNRFYRFTP 251 (255)
T ss_dssp EEEEETT--TTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE---ETTTEEEEEEC
T ss_pred EEEEECC--CCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE---cCCceEEEEEe
Confidence 7777755 3689999976 55665554432 25688999999986555 33456666654
No 293
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.76 E-value=0.00014 Score=67.82 Aligned_cols=196 Identities=9% Similarity=-0.079 Sum_probs=131.6
Q ss_pred eEEcCCCCEEEEEe--CCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeecC
Q 014755 13 SCFSPNARYIAVAV--DYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEG 89 (419)
Q Consensus 13 ~~~s~d~~~la~~~--~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~ 89 (419)
++|++.+..|..+. .+.|..+++.+........ .......+++.+.+..|+.+....+.|.+.+++.......+...
T Consensus 42 l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~ 121 (628)
T 4a0p_A 42 LDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKD 121 (628)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSS
T ss_pred EEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCC
Confidence 88999887877775 6789889887765555444 23467889999887777777655579999998755433223244
Q ss_pred CccEeEEEECCCCCEEEEEe-cCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCe
Q 014755 90 LAGIAYARWSPDSRHILTTS-DFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWE 168 (419)
Q Consensus 90 ~~~v~~~~~~~~~~~l~~~~-~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~ 168 (419)
-.....+++.|....|+.+. ...+.|...++.......+...-.....++++++++.|+.+... .+.|..+|++...
T Consensus 122 l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~--~~~I~~~d~dG~~ 199 (628)
T 4a0p_A 122 LDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLD--TNLIESSNMLGLN 199 (628)
T ss_dssp CCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETT--TTEEEEEETTSCS
T ss_pred CCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECC--CCEEEEEcCCCCc
Confidence 45678999999766777665 22348888888776554433344556899999998888887654 4689999987643
Q ss_pred EEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEE
Q 014755 169 IMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLL 214 (419)
Q Consensus 169 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~ 214 (419)
. ..+.........+++.. ..+++.+ ...+.|...|. +|+...
T Consensus 200 ~-~v~~~~l~~P~glav~~--~~ly~tD-~~~~~I~~~dk~tg~~~~ 242 (628)
T 4a0p_A 200 R-EVIADDLPHPFGLTQYQ--DYIYWTD-WSRRSIERANKTSGQNRT 242 (628)
T ss_dssp C-EEEEECCSCEEEEEEET--TEEEEEE-TTTTEEEEEETTTCCSCE
T ss_pred e-EEeeccCCCceEEEEEC--CEEEEec-CCCCEEEEEECCCCCceE
Confidence 3 23333333455677654 4566555 34677888886 554333
No 294
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.71 E-value=3.4e-05 Score=64.65 Aligned_cols=213 Identities=8% Similarity=-0.018 Sum_probs=138.6
Q ss_pred EcCCCCEEEEEe---CCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccC-------------CeEEEEEcc
Q 014755 15 FSPNARYIAVAV---DYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKR-------------LMIQAWSLT 78 (419)
Q Consensus 15 ~s~d~~~la~~~---~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~-------------g~i~iw~~~ 78 (419)
|+++|.+|+... ++.|...+.+.....++.... +--++++|++|+.....+ ..|+..+++
T Consensus 21 ~~~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~~----~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~d 96 (302)
T 3s25_A 21 FCESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSNDT----AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRN 96 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEEETTSCSCEEEEEEE----EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETT
T ss_pred EEEeCCEEEEEeCCCCceEEEEcCCCCCCEEccCCc----eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCC
Confidence 667899999986 566888887776666554422 345688999999887542 467777877
Q ss_pred CCcceeeeecCCccEeEEEECCCCCEEEEEe---cCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCC
Q 014755 79 QPEWTCKIDEGLAGIAYARWSPDSRHILTTS---DFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDC 155 (419)
Q Consensus 79 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 155 (419)
.++.. .+.... ...|++++++|+... .....|...++......++..+.. .+++++++.|+..+. +
T Consensus 97 g~~~~-~l~~~~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~--g 165 (302)
T 3s25_A 97 GHGST-VLDPDP----CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNP--K 165 (302)
T ss_dssp SCCCE-EEECSC----EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECT--T
T ss_pred CCcce-EeecCC----ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeC--C
Confidence 66533 343222 236788999999886 333467777777655555444332 356889999988765 2
Q ss_pred CCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCC
Q 014755 156 KDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQ 235 (419)
Q Consensus 156 ~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 235 (419)
...|+..++..+.....+.. ... ..+.|++.+|+..+......|..-+++|.....+... .+ ..|+|+++
T Consensus 166 ~~~Iy~~~l~g~~~~~l~~~---~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~----~~--~~~~~~g~ 235 (302)
T 3s25_A 166 NGQLYRYDTASQSEALFYDC---NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTEA----NI--EHYNVYGS 235 (302)
T ss_dssp TCCEEEEETTTTEEEEEECS---CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECSCS----CE--EEEEEETT
T ss_pred CceEEEEECCCCCEEEEeCC---Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEeCC----Cc--ceEEECCC
Confidence 46899999887665444332 222 2355999999876544346888888877666655421 23 34788888
Q ss_pred eEEEEEe--cCcEEEEEcC
Q 014755 236 FLAVGSY--DQTLRVLNHL 252 (419)
Q Consensus 236 ~l~~~~~--d~~i~v~d~~ 252 (419)
+|+.++. .+.|..-++.
T Consensus 236 ~Iy~~~~~~~~~i~~~~~D 254 (302)
T 3s25_A 236 LIFYQRGGDNPALCVVKND 254 (302)
T ss_dssp EEEEEECSSSCEEEEEETT
T ss_pred EEEEEECCCCcEEEEEECC
Confidence 8877643 2345555543
No 295
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.66 E-value=3.1e-07 Score=86.81 Aligned_cols=180 Identities=11% Similarity=-0.035 Sum_probs=115.9
Q ss_pred CeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC----CeEEE-eccCCCCeeeEEEccCC
Q 014755 70 LMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN----TACVH-VQSPKHASKGVAFTQDG 144 (419)
Q Consensus 70 g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~----~~~~~-~~~~~~~~~~~~~~~~~ 144 (419)
+.|+..++.+.+....+ .....+..++|.+.+..|+.+....+.|+.+++.+ ..... +.........+++.+.+
T Consensus 386 ~~I~~id~~~~~~~~~~-~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~ 464 (699)
T 1n7d_A 386 HEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 464 (699)
T ss_dssp TC-CEECTTSCCEECCS-CCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSS
T ss_pred cceEEEeCCCCcceeee-ccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeC
Confidence 57888888776554333 33345678999998888888865555899999875 22222 21122335678888766
Q ss_pred CEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCc
Q 014755 145 KFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLG 224 (419)
Q Consensus 145 ~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 224 (419)
..|+.+... .+.|.++++........+.........+++.|.+..|++.+....+.|+.++++|.....+... ....
T Consensus 465 g~LY~tD~~--~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~-~l~~ 541 (699)
T 1n7d_A 465 SNIYWTDSV--LGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE-NIQW 541 (699)
T ss_dssp SBCEECCTT--TSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCS-SCSS
T ss_pred CcEEEEecc--CCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeC-CCCC
Confidence 666655332 3689999988654443333333556889999988888775544347899988877655444221 1225
Q ss_pred eeEEEEccCCCeEEEEE-ecCcEEEEEcCC
Q 014755 225 VKSISWSPCGQFLAVGS-YDQTLRVLNHLT 253 (419)
Q Consensus 225 v~~~~~s~~~~~l~~~~-~d~~i~v~d~~~ 253 (419)
...|+|+|++..|+.+. ..+.|.++++..
T Consensus 542 PnGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 542 PNGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred ccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 78899999876665554 456788888753
No 296
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.64 E-value=0.00056 Score=68.20 Aligned_cols=214 Identities=14% Similarity=0.060 Sum_probs=109.3
Q ss_pred CCCEEEEEeCCeEEEEecCCCcEEE--EeecCcceeEEEEecC------CCeEEEEeccCCeEEEEEccCCcceeeeec-
Q 014755 18 NARYIAVAVDYRLVVRDAHSFKVVQ--LFSCLDKISYIEWALD------SEYILCGLYKRLMIQAWSLTQPEWTCKIDE- 88 (419)
Q Consensus 18 d~~~la~~~~~~i~i~~~~~~~~~~--~~~~~~~v~~~~~s~~------~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~- 88 (419)
++.+++.++.+.+.++.+..+++.. ...-...|.|+++.|. ++++++|...+++++|+++.+.+.+....-
T Consensus 522 n~~~vvva~g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~ 601 (1158)
T 3ei3_A 522 NSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLG 601 (1158)
T ss_dssp CSSEEEEEETTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECC
T ss_pred CCCEEEEEECCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECC
Confidence 3456666666677777776554332 2234678999999863 468999987458999999987665433221
Q ss_pred CCccEeEEEEC--CCCCEEEEEecCCCeEEEEEcC--CCeEEE---eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEE
Q 014755 89 GLAGIAYARWS--PDSRHILTTSDFQLRLTVWSLL--NTACVH---VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINL 161 (419)
Q Consensus 89 ~~~~v~~~~~~--~~~~~l~~~~~~~~~i~iwd~~--~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i 161 (419)
......++.+. ....+|..+-.+| .+.-+.+. +|+... ......++.-..+...+..-+.+..+ ....+
T Consensus 602 ~~~~p~si~l~~~~~~~~L~igl~dG-~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~---rp~li 677 (1158)
T 3ei3_A 602 GEIIPRSILMTTFESSHYLLCALGDG-ALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSD---RPTVI 677 (1158)
T ss_dssp SSCCEEEEEEEEETTEEEEEEEETTS-EEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESS---SCEEE
T ss_pred CCCCCcEEEEEEeCCCcEEEEEeCCC-eEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECC---CCEEE
Confidence 11223333332 2334666666666 76555543 444332 12223344333333334333333322 23334
Q ss_pred EeccCCeEEEEEeccccce-eeeeECCC--CCeEEEEcCCCCceEEEEcC---CCceEEEEeecCCCCceeEEEEccCCC
Q 014755 162 LSCHTWEIMGVFAVDTLDL-ADIEWSPD--DSAIVIWDSPLEYKVLIYSP---DGRCLLKYQAYESGLGVKSISWSPCGQ 235 (419)
Q Consensus 162 ~d~~~~~~~~~~~~~~~~v-~~~~~~~~--~~~l~~~~~~~~~~i~~~d~---~~~~~~~~~~~~~~~~v~~~~~s~~~~ 235 (419)
|.-+ ++.... ...-..+ ....|+.. ..-++.. . ++.+++..+ ..-.++++.... .+..++++|..+
T Consensus 678 y~~~-~~l~~s-~l~~~~v~~~~~F~se~~~~g~v~~--~-~~~LrI~~i~~~~~~~~~~ipL~~---Tprri~y~~~~~ 749 (1158)
T 3ei3_A 678 YSSN-HKLVFS-NVNLKEVNYMCPLNSDGYPDSLALA--N-NSTLTIGTIDEIQKLHIRTVPLYE---SPRKICYQEVSQ 749 (1158)
T ss_dssp EESS-SSEEEE-EBSSSCCCEEEEECCSSSTTEEEEE--C-SSCEEEEEECCSSSEEEEEEECSS---EEEEEEEEGGGT
T ss_pred EEcC-CceEEe-ccChHHhceEeccCcccCCCcEEEE--c-CCceEEEEecccCCeeEEEEeCCC---CceEEEEcCCCC
Confidence 4333 222211 1111122 22334322 1223332 2 345777766 222333333322 689999999988
Q ss_pred eEEEEEec
Q 014755 236 FLAVGSYD 243 (419)
Q Consensus 236 ~l~~~~~d 243 (419)
.++.+..+
T Consensus 750 ~~~v~~~~ 757 (1158)
T 3ei3_A 750 CFGVLSSR 757 (1158)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 77766544
No 297
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.63 E-value=0.00018 Score=61.97 Aligned_cols=143 Identities=15% Similarity=0.210 Sum_probs=82.1
Q ss_pred CCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEec------cCCCCeeeEEEccC---CCEEEEEeecCCC---
Q 014755 89 GLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQ------SPKHASKGVAFTQD---GKFAAICTRRDCK--- 156 (419)
Q Consensus 89 ~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~------~~~~~~~~~~~~~~---~~~l~~~~~~~~~--- 156 (419)
.-.....++|.|+|+.++ +...+ .|.+++ +++...+. ........++++|+ +..|+++......
T Consensus 29 ~l~~P~~ia~~pdG~l~V-~e~~g-~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~ 104 (352)
T 2ism_A 29 GLEVPWALAFLPDGGMLI-AERPG-RIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLR 104 (352)
T ss_dssp CCSCEEEEEECTTSCEEE-EETTT-EEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSE
T ss_pred CCCCceEEEEcCCCeEEE-EeCCC-eEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCc
Confidence 344568999999998544 44444 899998 44433211 11345689999998 5666655442111
Q ss_pred CeEEEEeccCCe-----E-EEEEe---ccccceeeeeECCCCCeEEEEcCC------------CCceEEEEcCCCce---
Q 014755 157 DYINLLSCHTWE-----I-MGVFA---VDTLDLADIEWSPDDSAIVIWDSP------------LEYKVLIYSPDGRC--- 212 (419)
Q Consensus 157 g~v~i~d~~~~~-----~-~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~------------~~~~i~~~d~~~~~--- 212 (419)
+.|..++..... . +..+. ........++|.|||.+++. .+. ..+.|..++.+++.
T Consensus 105 ~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~-~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~ 183 (352)
T 2ism_A 105 NQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVT-TGEVYERELAQDLASLGGKILRLTPEGEPAPG 183 (352)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEE-CCCTTCGGGGGCTTCSSSEEEEECTTSSBCTT
T ss_pred cEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEE-ECCCCCCccccCCCCCceEEEEEcCCCCCCCC
Confidence 368888876432 1 11122 11123468999999965444 221 12678888876521
Q ss_pred ----------EEEEe-ecCCCCceeEEEEcc-CCCeEEE
Q 014755 213 ----------LLKYQ-AYESGLGVKSISWSP-CGQFLAV 239 (419)
Q Consensus 213 ----------~~~~~-~~~~~~~v~~~~~s~-~~~~l~~ 239 (419)
...+. ++. ....++|+| +|+++++
T Consensus 184 npf~~~~~~~~~i~a~G~r---np~g~a~d~~~g~l~v~ 219 (352)
T 2ism_A 184 NPFLGRRGARPEVYSLGHR---NPQGLAWHPKTGELFSS 219 (352)
T ss_dssp CTTTTCTTSCTTEEEECCS---EECCCEECTTTCCEEEE
T ss_pred CcccCCCCCCccEEEEcCC---CcccEEEECCCCCEEEE
Confidence 11111 111 477899999 5554444
No 298
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.59 E-value=0.00017 Score=59.52 Aligned_cols=237 Identities=9% Similarity=0.083 Sum_probs=154.9
Q ss_pred eEEcCCCCEEEEEeCCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCC-cceeeeecCC-
Q 014755 13 SCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQP-EWTCKIDEGL- 90 (419)
Q Consensus 13 ~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~-~~~~~~~~~~- 90 (419)
.-.+|..+.||.-....+.|+|+++.+.++.+.....|.-=.|-.+. .|+..+ + ..|+-|+++.. .+.+.+..|.
T Consensus 72 AIMnP~~~ViALrag~~LQiFnletK~klks~~~~e~VvfWkWis~~-~L~lVT-~-taVyHWs~~~~s~P~kvFdR~~~ 148 (365)
T 2xzh_A 72 AIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN-TVALVT-D-NAVYHWSMEGESQPVKMFDRHSS 148 (365)
T ss_dssp EEECSSSSEEEEEETTEEEEEETTTTEEEEEEECSSCEEEEEECSSS-EEEEEE-S-SEEEEEESSTTCCCEEEEECCGG
T ss_pred eeeCCCccEEEEecCCeEEEechHHhhhhcceecCCccEEEEecCCC-eEEEEc-C-CcEEEEcccCCCCCceeeecchh
Confidence 45799999999988888999999999999988878888888888554 555555 3 48999999864 3333444433
Q ss_pred ---ccEeEEEECCCCCEEEEEec---CC---CeEEEEEcCCCeEEEeccCCCCeeeEEEc--cC-CCEEEEEeecCCCCe
Q 014755 91 ---AGIAYARWSPDSRHILTTSD---FQ---LRLTVWSLLNTACVHVQSPKHASKGVAFT--QD-GKFAAICTRRDCKDY 158 (419)
Q Consensus 91 ---~~v~~~~~~~~~~~l~~~~~---~~---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~~-~~~l~~~~~~~~~g~ 158 (419)
..|.....+++.++++..+- ++ |.+.+|..+.+....+.+|...-..+.+. +. ...++.+......+.
T Consensus 149 L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~k 228 (365)
T 2xzh_A 149 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGK 228 (365)
T ss_dssp GTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEE
T ss_pred cccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcE
Confidence 45888888999999887652 22 48899999988877776664332222221 11 134555555332258
Q ss_pred EEEEeccCC---e------EEEEEecc---ccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCce
Q 014755 159 INLLSCHTW---E------IMGVFAVD---TLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGV 225 (419)
Q Consensus 159 v~i~d~~~~---~------~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v 225 (419)
+++.++... . .+..+... ..-..++..++.-..+.+ .+.-|.+++||+ +|.++..-+.... .|
T Consensus 229 LhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyv--iTK~G~ihlyDleTgt~i~~nrIS~d--~i 304 (365)
T 2xzh_A 229 LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL--ITKYGYIHLYDLETGTCIYMNRISGE--TI 304 (365)
T ss_dssp EEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEE--EETTSEEEEEETTTCCEEEEEECCSS--CE
T ss_pred EEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEE--EeCCcEEEEEEcccCcEEEEeccCCC--ce
Confidence 999988432 1 11111111 233456677777777776 466799999999 8988876665444 45
Q ss_pred eEEEEccCCCeEEEEEecCcEEEEEcCCcee
Q 014755 226 KSISWSPCGQFLAVGSYDQTLRVLNHLTWKT 256 (419)
Q Consensus 226 ~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~ 256 (419)
..-+.+....-++.....|.|.--.++..+.
T Consensus 305 F~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~i 335 (365)
T 2xzh_A 305 FVTAPHEATAGIIGVNRKGQVLSVCVEEENI 335 (365)
T ss_dssp EEEEEEGGGTEEEEEETTCEEEEEEECTTTH
T ss_pred EEecccCCCCcEEEEcCCCEEEEEEECcccE
Confidence 5445444444455555667666655555443
No 299
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.56 E-value=5.8e-05 Score=63.48 Aligned_cols=193 Identities=10% Similarity=0.182 Sum_probs=118.4
Q ss_pred CCeEEEEeccCCeEEEEEccCCcceeeeecCCccEeEEEECC----CCCE--EEEE-ecC--CCeEEEEEc--CCCeEEE
Q 014755 59 SEYILCGLYKRLMIQAWSLTQPEWTCKIDEGLAGIAYARWSP----DSRH--ILTT-SDF--QLRLTVWSL--LNTACVH 127 (419)
Q Consensus 59 ~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~--l~~~-~~~--~~~i~iwd~--~~~~~~~ 127 (419)
..+++.... ++-+.+||+ +|+.+..+.. +.++.+..-| .|+. ++.+ ..+ .++|.+|++ .+++...
T Consensus 40 ~s~ii~t~k-~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~ 115 (355)
T 3amr_A 40 NSKLITTNK-KSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS 115 (355)
T ss_dssp GCEEEEEET-TTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEE
T ss_pred ccEEEEEcC-CCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceee
Confidence 344444443 478999999 7888877753 4455555544 3333 3444 344 459999977 4454333
Q ss_pred ecc------CC-CCeeeEEE--ccC-CCE-EEEEeecCCCCeEEEEecc-------CCeEEEEEeccccceeeeeECCCC
Q 014755 128 VQS------PK-HASKGVAF--TQD-GKF-AAICTRRDCKDYINLLSCH-------TWEIMGVFAVDTLDLADIEWSPDD 189 (419)
Q Consensus 128 ~~~------~~-~~~~~~~~--~~~-~~~-l~~~~~~~~~g~v~i~d~~-------~~~~~~~~~~~~~~v~~~~~~~~~ 189 (419)
+.. .. ..+..+++ +|. +++ +++...+ |.+..|++. +.+.++.+... ..+..+...+..
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~---G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~EgcvvDd~~ 191 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKE---GEFEQYELKADKNGYISGKKVRAFKMN-SQTEGMAADDEY 191 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSS---SEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEEEEETTT
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCC---CeEEEEEEEeCCCCcccceEEEEecCC-CCcceEEEcCCC
Confidence 321 11 45677888 774 443 4444443 788888882 34666777654 567788888888
Q ss_pred CeEEEEcCCCCceEEEEcCC------CceEEEEeecCCCCceeEEEE--ccCCC-eEEEEE-ecCcEEEEEcC-Cceeee
Q 014755 190 SAIVIWDSPLEYKVLIYSPD------GRCLLKYQAYESGLGVKSISW--SPCGQ-FLAVGS-YDQTLRVLNHL-TWKTFA 258 (419)
Q Consensus 190 ~~l~~~~~~~~~~i~~~d~~------~~~~~~~~~~~~~~~v~~~~~--s~~~~-~l~~~~-~d~~i~v~d~~-~~~~~~ 258 (419)
..|++ +..+..|+.|+.. ++.+..+....-...+..|++ .++++ +|++++ .+++..+||.+ +.+.+.
T Consensus 192 g~Lyv--~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg 269 (355)
T 3amr_A 192 GRLYI--AEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVA 269 (355)
T ss_dssp TEEEE--EETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEE
T ss_pred CeEEE--ecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEE
Confidence 88888 4445668888852 223333321111125888888 45555 666665 56799999986 666666
Q ss_pred eec
Q 014755 259 EFM 261 (419)
Q Consensus 259 ~~~ 261 (419)
.|.
T Consensus 270 ~f~ 272 (355)
T 3amr_A 270 DFR 272 (355)
T ss_dssp EEE
T ss_pred EEE
Confidence 664
No 300
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.55 E-value=0.00028 Score=60.15 Aligned_cols=216 Identities=11% Similarity=0.089 Sum_probs=118.8
Q ss_pred eEEcCCCCEEEEEeCCeEEEEecCCCcEEEEee-----cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeee
Q 014755 13 SCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFS-----CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKID 87 (419)
Q Consensus 13 ~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~ 87 (419)
|.|.+++..++++..+.| +...+.++.-.... ....+.+|.|.+ +..+++ +.. |.|.. ..+.|+.-..+.
T Consensus 41 v~~~~~~~~~~~G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~~-g~~-g~i~~-S~DgG~tW~~~~ 115 (327)
T 2xbg_A 41 MSFIDRHHGWLVGVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWIV-GEP-PIMLH-TTDGGQSWSQIP 115 (327)
T ss_dssp EEESSSSCEEEEETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEEE-EET-TEEEE-ESSTTSSCEECC
T ss_pred EEECCCCcEEEEcCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEEE-ECC-CeEEE-ECCCCCCceECc
Confidence 677777888886666655 33444444322221 234688999986 444444 434 64443 333344322322
Q ss_pred ---cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCe-EEE-eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEE-
Q 014755 88 ---EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTA-CVH-VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINL- 161 (419)
Q Consensus 88 ---~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~-~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i- 161 (419)
.....+..+.+.+++..++++ ..+ .|.. ....|+ ... .......+..+.+.+++.+++++.. |.++.
T Consensus 116 ~~~~~~~~~~~i~~~~~~~~~~~~-~~g-~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~----G~~~~S 188 (327)
T 2xbg_A 116 LDPKLPGSPRLIKALGNGSAEMIT-NVG-AIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSR----GSFYST 188 (327)
T ss_dssp CCTTCSSCEEEEEEEETTEEEEEE-TTC-CEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETT----SSEEEE
T ss_pred cccCCCCCeEEEEEECCCCEEEEe-CCc-cEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECC----CcEEEE
Confidence 123456778877777655544 444 3322 222232 222 2334456788999999887776643 34443
Q ss_pred Eec--cCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCC-CceEEEEeec--CCCCceeEEEEccCCCe
Q 014755 162 LSC--HTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPD-GRCLLKYQAY--ESGLGVKSISWSPCGQF 236 (419)
Q Consensus 162 ~d~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~-~~~~~~~~~~--~~~~~v~~~~~s~~~~~ 236 (419)
.|- .+++.+. ......+..+.+.++++.+++. .++.+++.+.+ |+....+... .....+..+++.++++.
T Consensus 189 ~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~~~---~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~ 263 (327)
T 2xbg_A 189 WEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWMIV---NGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEV 263 (327)
T ss_dssp ECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEEEE---TTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCE
T ss_pred eCCCCCceeECC--CCCCCccceeEECCCCCEEEEe---CCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEE
Confidence 442 4455542 2334567888999999877652 35677776432 3332222211 11125788999988776
Q ss_pred EEEEEecCcE
Q 014755 237 LAVGSYDQTL 246 (419)
Q Consensus 237 l~~~~~d~~i 246 (419)
++++. ++.|
T Consensus 264 ~~~g~-~g~i 272 (327)
T 2xbg_A 264 WLAGG-AGAL 272 (327)
T ss_dssp EEEES-TTCE
T ss_pred EEEeC-CCeE
Confidence 66554 6665
No 301
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.54 E-value=8e-05 Score=62.40 Aligned_cols=213 Identities=9% Similarity=-0.011 Sum_probs=134.9
Q ss_pred EEcCCCCEEEEEe-C--------------CeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEe---ccCCeEEEE
Q 014755 14 CFSPNARYIAVAV-D--------------YRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGL---YKRLMIQAW 75 (419)
Q Consensus 14 ~~s~d~~~la~~~-~--------------~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~---~~~g~i~iw 75 (419)
-++++|++|+.+. . ..|+..++.+.+...+.... ...|++++++|+... .....|...
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~ 134 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPDP----CIYASLIGNYIYYLHYDTQTATSLYRI 134 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECSC----EEEEEEETTEEEEEEESSSSCEEEEEE
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecCC----ccEEEEeCCEEEEEeecCCCCceEEEE
Confidence 3788999999986 2 24777888877655544322 237888999999876 233466666
Q ss_pred EccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEEEeecCC
Q 014755 76 SLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAICTRRDC 155 (419)
Q Consensus 76 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 155 (419)
+++... ..++..+.. .+++++++.|+..+....+|...++.++....+.. .... ..+.|++.+|+.....+.
T Consensus 135 ~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~--~~~~-~~~~P~g~~iy~t~~~~~ 206 (302)
T 3s25_A 135 RIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD--CNCY-KPVVLDDTNVYYMDVNRD 206 (302)
T ss_dssp ETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC--SCEE-EEEEEETTEEEEEEGGGT
T ss_pred ECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC--CCcc-ceeeecCCEEEEEEcCCC
Confidence 766443 445554433 45678999999887644589999998877666432 2222 346699999988765422
Q ss_pred CCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCC
Q 014755 156 KDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQ 235 (419)
Q Consensus 156 ~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 235 (419)
..|...+++.... ..+.. ..+ ..|+|+++.|...+......|...+++|...+.+... .+. .+++.+.
T Consensus 207 -~~I~~~~ldG~~~-~~Lt~--~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~~~----~~~--~i~i~~d 274 (302)
T 3s25_A 207 -NAIVHVNINNPNP-VVLTE--ANI--EHYNVYGSLIFYQRGGDNPALCVVKNDGTGFKELAKG----EFC--NINVTSQ 274 (302)
T ss_dssp -TEEEEECSSSCCC-EECSC--SCE--EEEEEETTEEEEEECSSSCEEEEEETTSCCCEEEEES----CEE--EEEECSS
T ss_pred -cEEEEEECCCCCe-EEEeC--CCc--ceEEECCCEEEEEECCCCcEEEEEECCCCccEEeeCC----ccc--eEEEeCC
Confidence 4788888876543 23322 223 3478889998764334457888888888766666432 233 3455666
Q ss_pred eEEEEEe-cCcEEEEE
Q 014755 236 FLAVGSY-DQTLRVLN 250 (419)
Q Consensus 236 ~l~~~~~-d~~i~v~d 250 (419)
+|+.... .+.|...+
T Consensus 275 ~Iy~td~~~~~i~~~~ 290 (302)
T 3s25_A 275 YVYFTDFVSNKEYCTS 290 (302)
T ss_dssp EEEEEETTTCCEEEEE
T ss_pred EEEEEECCCCeEEEEE
Confidence 6666542 23444333
No 302
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.51 E-value=0.00037 Score=59.42 Aligned_cols=272 Identities=6% Similarity=-0.006 Sum_probs=148.4
Q ss_pred cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeee----cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcC
Q 014755 46 CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKID----EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLL 121 (419)
Q Consensus 46 ~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~ 121 (419)
....+.+|.|.+++..++++. . |.| +...+.++.-..+. .....+.++.|.+ + .+++++..+ .|.. ...
T Consensus 34 ~~~~~~~v~~~~~~~~~~~G~-~-g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~-~~~~~g~~g-~i~~-S~D 106 (327)
T 2xbg_A 34 TTATILDMSFIDRHHGWLVGV-N-ATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-N-EGWIVGEPP-IMLH-TTD 106 (327)
T ss_dssp CSSCEEEEEESSSSCEEEEET-T-TEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-T-EEEEEEETT-EEEE-ESS
T ss_pred CCCcEEEEEECCCCcEEEEcC-C-CeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-C-eEEEEECCC-eEEE-ECC
Confidence 345789999988787777553 4 655 33334443222221 1234688899976 3 344455554 4433 333
Q ss_pred CCeEEE-ec---cCCCCeeeEEEccCCCEEEEEeecCCCCeEEE-Ee-ccCCeEEEEEeccccceeeeeECCCCCeEEEE
Q 014755 122 NTACVH-VQ---SPKHASKGVAFTQDGKFAAICTRRDCKDYINL-LS-CHTWEIMGVFAVDTLDLADIEWSPDDSAIVIW 195 (419)
Q Consensus 122 ~~~~~~-~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i-~d-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 195 (419)
.|+.-. .. ..+..+..+.+.+++..++++. + |.|+. .| -++++.+. ......+..+.+.|++..+++
T Consensus 107 gG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~---g~v~~S~DgG~tW~~~~--~~~~~~~~~~~~~~~~~~~~~- 179 (327)
T 2xbg_A 107 GGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN-V---GAIYRTKDSGKNWQALV--QEAIGVMRNLNRSPSGEYVAV- 179 (327)
T ss_dssp TTSSCEECCCCTTCSSCEEEEEEEETTEEEEEET-T---CCEEEESSTTSSEEEEE--CSCCCCEEEEEECTTSCEEEE-
T ss_pred CCCCceECccccCCCCCeEEEEEECCCCEEEEeC-C---ccEEEEcCCCCCCEEee--cCCCcceEEEEEcCCCcEEEE-
Confidence 343222 21 1234467777777776665543 2 44432 22 12233322 233456888999999988876
Q ss_pred cCCCCceEEE-EcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccce
Q 014755 196 DSPLEYKVLI-YSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAV 274 (419)
Q Consensus 196 ~~~~~~~i~~-~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 274 (419)
+. .+.++. .|..|..-..+... ....+..++++++++.++ .+.+|.+++.+...++.-..+..+. +
T Consensus 180 -g~-~G~~~~S~d~gG~tW~~~~~~-~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~-~-------- 246 (327)
T 2xbg_A 180 -SS-RGSFYSTWEPGQTAWEPHNRT-TSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPL-R-------- 246 (327)
T ss_dssp -ET-TSSEEEEECTTCSSCEEEECC-SSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTT-S--------
T ss_pred -EC-CCcEEEEeCCCCCceeECCCC-CCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCc-c--------
Confidence 33 344433 34324443333322 223688999999886554 4556777765422233222211000 0
Q ss_pred eccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCC
Q 014755 275 FKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDS 354 (419)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d 354 (419)
.+...+..+++.+++.+++++..
T Consensus 247 --------------------------------------------------------~~~~~~~~v~~~~~~~~~~~g~~- 269 (327)
T 2xbg_A 247 --------------------------------------------------------RNSVGFLDLAYRTPNEVWLAGGA- 269 (327)
T ss_dssp --------------------------------------------------------SCCSCEEEEEESSSSCEEEEEST-
T ss_pred --------------------------------------------------------cCCcceEEEEecCCCEEEEEeCC-
Confidence 01223778889988888877764
Q ss_pred CCceEEEeeccCCCceeec----ccCCCeeEEEeCCCCCeEEEEeCCCcEEEeec
Q 014755 355 MPTTLWIWDICRQEPAAIL----VQKDPIRAATWDPTCTRLVLCTGSSHLYMWTP 405 (419)
Q Consensus 355 ~~~~i~iwd~~~~~~~~~~----~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 405 (419)
+.| .+..+.++--... .....+.++.|.++++ ++.++.+|.|.-++-
T Consensus 270 --g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 270 --GAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYVT 320 (327)
T ss_dssp --TCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEECC
T ss_pred --CeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEcC
Confidence 766 3444445432222 1345788999975554 666778897776654
No 303
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.45 E-value=0.00055 Score=58.91 Aligned_cols=237 Identities=9% Similarity=0.076 Sum_probs=157.6
Q ss_pred eEEcCCCCEEEEEeCCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCc-ceeeeecCC-
Q 014755 13 SCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPE-WTCKIDEGL- 90 (419)
Q Consensus 13 ~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~-~~~~~~~~~- 90 (419)
.-.+|..+.||.-...++.|+|+++.+.++.+.....|.-=.|-.+. .|+..+ + ..|+-|+++... +...+..|.
T Consensus 71 AIMnP~~~iiALrag~~lQiFnle~K~klks~~~~e~VvfWkWis~~-~l~lVT-~-taVyHWsi~~~s~P~kvFdR~~~ 147 (494)
T 1bpo_A 71 AIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN-TVALVT-D-NAVYHWSMEGESQPVKMFDRHSS 147 (494)
T ss_dssp EEECSSSSCEEEEETTEEEEEETTTTEEEEEEECSSCCCEEEEEETT-EEEEEC-S-SEEEEEESSSSCCCEEEEECCGG
T ss_pred eeeCCCCcEEEEecCCeEEEEchHHhhhhcceecCCCceEEEecCCC-eEEEEc-C-CeeEEecccCCCCchhheecchh
Confidence 55789999999988889999999999999888877788888887554 566555 3 489999997543 333444443
Q ss_pred ---ccEeEEEECCCCCEEEEEec---C---CCeEEEEEcCCCeEEEeccCCCCeeeEEEccC---CCEEEEEeecCCCCe
Q 014755 91 ---AGIAYARWSPDSRHILTTSD---F---QLRLTVWSLLNTACVHVQSPKHASKGVAFTQD---GKFAAICTRRDCKDY 158 (419)
Q Consensus 91 ---~~v~~~~~~~~~~~l~~~~~---~---~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~~~g~ 158 (419)
..|.....+++.++++..|- + .|.+.+|..+.+....+.+|...-..+.+..+ ...++.+......+.
T Consensus 148 L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~k 227 (494)
T 1bpo_A 148 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGK 227 (494)
T ss_dssp GTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCE
T ss_pred cccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcE
Confidence 45888888999999887652 2 24789999998877777766543333332211 135555655433368
Q ss_pred EEEEeccCC---e------EEEEEecc---ccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCce
Q 014755 159 INLLSCHTW---E------IMGVFAVD---TLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGV 225 (419)
Q Consensus 159 v~i~d~~~~---~------~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v 225 (419)
+++.++... . .+..+... ..-..++..++....+.+ .+.-|.+++||+ ++.++..-+.... .|
T Consensus 228 Lhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyv--iTK~G~i~lyDleTgt~i~~nrIs~~--~i 303 (494)
T 1bpo_A 228 LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL--ITKYGYIHLYDLETGTCIYMNRISGE--TI 303 (494)
T ss_dssp EEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEE--EETTSEEEEEETTTCCEEEEEECCSS--CE
T ss_pred EEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEE--EecCceEEEEecccceeeeeecccCC--ce
Confidence 999998542 1 11111111 233456777777777777 566899999999 8988877665444 55
Q ss_pred eEEEEccCCCeEEEEEecCcEEEEEcCCcee
Q 014755 226 KSISWSPCGQFLAVGSYDQTLRVLNHLTWKT 256 (419)
Q Consensus 226 ~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~ 256 (419)
..-+.+....-++.....|.|.--.++....
T Consensus 304 F~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~i 334 (494)
T 1bpo_A 304 FVTAPHEATAGIIGVNRKGQVLSVCVEEENI 334 (494)
T ss_dssp EEEEEETTTTEEEEEETTCEEEEEEECTTTH
T ss_pred EEecccCCCCcEEEEccCceEEEEEEccccc
Confidence 5555555444555555677776666655443
No 304
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.45 E-value=0.00023 Score=59.93 Aligned_cols=183 Identities=13% Similarity=0.126 Sum_probs=115.8
Q ss_pred CCeEEEEecCCCcEEEEeecCcceeEEEEecC----CCe--EEEEe-cc--CCeEEEEEcc--CCcceeeeec------C
Q 014755 27 DYRLVVRDAHSFKVVQLFSCLDKISYIEWALD----SEY--ILCGL-YK--RLMIQAWSLT--QPEWTCKIDE------G 89 (419)
Q Consensus 27 ~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~----~~~--l~~~~-~~--~g~i~iw~~~--~~~~~~~~~~------~ 89 (419)
.+.+.+||+ .|+.++.+.. +.++.+..-|+ |+. +++++ .+ +++|.+|++. +++ +..+.. .
T Consensus 49 ~~gL~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~~~~~pv~t 125 (355)
T 3amr_A 49 KSGLVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMTDPDHPIAT 125 (355)
T ss_dssp TTEEEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECSCTTSCEEC
T ss_pred CCCEEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeeccccccCcCC
Confidence 678999999 7888877754 66788877773 222 34433 33 4699999773 443 334421 1
Q ss_pred C-ccEeEEEE--CCC-CC-EEEEEecCCCeEEEEEcC-------CCeEEEeccCCCCeeeEEEccCCCEEEEEeecCCCC
Q 014755 90 L-AGIAYARW--SPD-SR-HILTTSDFQLRLTVWSLL-------NTACVHVQSPKHASKGVAFTQDGKFAAICTRRDCKD 157 (419)
Q Consensus 90 ~-~~v~~~~~--~~~-~~-~l~~~~~~~~~i~iwd~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g 157 (419)
. ..+..+++ +|. ++ ++++...+ +.+..|++. +.+.++.......+..+...+....|+++-++ .
T Consensus 126 ~~~~pyGlcly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd---~ 201 (355)
T 3amr_A 126 AINEVYGFTLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEED---E 201 (355)
T ss_dssp CCSSCCCEEEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETT---T
T ss_pred CCCCeeEEEEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEeccc---c
Confidence 1 45666777 774 54 45555555 499999883 23444433345678889999988999999876 3
Q ss_pred eEEEEecc-----CCeEEEEEec-c-ccceeeeeE--CCCCC-eEEEEcCCCCceEEEEcC--CCceEEEEe
Q 014755 158 YINLLSCH-----TWEIMGVFAV-D-TLDLADIEW--SPDDS-AIVIWDSPLEYKVLIYSP--DGRCLLKYQ 217 (419)
Q Consensus 158 ~v~i~d~~-----~~~~~~~~~~-~-~~~v~~~~~--~~~~~-~l~~~~~~~~~~i~~~d~--~~~~~~~~~ 217 (419)
.|..++.+ +++.+..+.. + ...+..+++ .++++ +|++. ...+..+.+||. +.+.+..+.
T Consensus 202 GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivS-sQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 202 AIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMAS-SQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEE-EGGGTEEEEEESSTTCCEEEEEE
T ss_pred eEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEE-cCCCCEEEEEECCCCCcEEEEEE
Confidence 47777855 3455544421 1 235777777 56666 55553 344678999998 345555554
No 305
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.36 E-value=0.00095 Score=57.49 Aligned_cols=149 Identities=12% Similarity=0.147 Sum_probs=84.1
Q ss_pred cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcce--eee---ecCCccEeEEEECCC---CCEEEEEecCC-----
Q 014755 46 CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWT--CKI---DEGLAGIAYARWSPD---SRHILTTSDFQ----- 112 (419)
Q Consensus 46 ~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~--~~~---~~~~~~v~~~~~~~~---~~~l~~~~~~~----- 112 (419)
.-.....|+|.|+|+++++ ... |.|++++ +++.. ..+ .........++|+|+ +..|+++....
T Consensus 29 ~l~~P~~ia~~pdG~l~V~-e~~-g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~ 104 (352)
T 2ism_A 29 GLEVPWALAFLPDGGMLIA-ERP-GRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLR 104 (352)
T ss_dssp CCSCEEEEEECTTSCEEEE-ETT-TEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSE
T ss_pred CCCCceEEEEcCCCeEEEE-eCC-CeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCc
Confidence 4456789999999985555 444 8999998 44321 111 112346789999998 56666554321
Q ss_pred CeEEEEEcCCCe-----EEE--ec---cCCCCeeeEEEccCCCEEEEEeec----------CCCCeEEEEeccCC-----
Q 014755 113 LRLTVWSLLNTA-----CVH--VQ---SPKHASKGVAFTQDGKFAAICTRR----------DCKDYINLLSCHTW----- 167 (419)
Q Consensus 113 ~~i~iwd~~~~~-----~~~--~~---~~~~~~~~~~~~~~~~~l~~~~~~----------~~~g~v~i~d~~~~----- 167 (419)
..|..++...+. .+. +. ...+....++|.|||.+.++.+.. ...|.|..++.+..
T Consensus 105 ~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~n 184 (352)
T 2ism_A 105 NQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGN 184 (352)
T ss_dssp EEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTC
T ss_pred cEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCC
Confidence 378888887541 111 22 112334789999999655543321 11256777776531
Q ss_pred -------eEEEEEeccccceeeeeECCCCCeEEEEcCC
Q 014755 168 -------EIMGVFAVDTLDLADIEWSPDDSAIVIWDSP 198 (419)
Q Consensus 168 -------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 198 (419)
.....+...-.....++|+|+...|.+.+..
T Consensus 185 pf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g 222 (352)
T 2ism_A 185 PFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHG 222 (352)
T ss_dssp TTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEEC
T ss_pred cccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcC
Confidence 0111111112346788999944445554443
No 306
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.32 E-value=0.00053 Score=57.19 Aligned_cols=160 Identities=6% Similarity=0.003 Sum_probs=109.7
Q ss_pred hhhhcccccCeEEcCCCCEEEEEe--CCeEEEEecCCCcEEEE-eec-------CcceeEEEE---ecCCCeEEEEec--
Q 014755 3 FTEAYKQTGPSCFSPNARYIAVAV--DYRLVVRDAHSFKVVQL-FSC-------LDKISYIEW---ALDSEYILCGLY-- 67 (419)
Q Consensus 3 ~~~~~~~~~~~~~s~d~~~la~~~--~~~i~i~~~~~~~~~~~-~~~-------~~~v~~~~~---s~~~~~l~~~~~-- 67 (419)
+.....+...++|.+....+.+++ .++|..|+..++..... +.+ ...+..|.| .|+++++++...
T Consensus 8 ~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~ 87 (334)
T 2p9w_A 8 VKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAK 87 (334)
T ss_dssp ECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETT
T ss_pred ecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccc
Confidence 334455666799998777777776 79999999986655444 222 114689999 688877775431
Q ss_pred ----------cCCeEEEEEcc---CCcceeeeec-------------CCccEeEEEECCCCCEEEEEecC-CCeEEEEEc
Q 014755 68 ----------KRLMIQAWSLT---QPEWTCKIDE-------------GLAGIAYARWSPDSRHILTTSDF-QLRLTVWSL 120 (419)
Q Consensus 68 ----------~~g~i~iw~~~---~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~~~~~~-~~~i~iwd~ 120 (419)
.+..|..+|+. +++.+....- .......++..++|+..++.+.. + .|...+.
T Consensus 88 af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~-~I~rV~p 166 (334)
T 2p9w_A 88 SFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMP-AIARVSA 166 (334)
T ss_dssp TTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSC-EEEEECT
T ss_pred cccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCC-eEEEEeC
Confidence 02579999998 7766544331 11247899999999988887765 5 7777776
Q ss_pred CCCeEEE--eccC----CCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC
Q 014755 121 LNTACVH--VQSP----KHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT 166 (419)
Q Consensus 121 ~~~~~~~--~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~ 166 (419)
....... +... ....+.++++|++..|++.... |.+..+|+++
T Consensus 167 dG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~---g~L~~fD~~~ 215 (334)
T 2p9w_A 167 DGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGP---RALTAFDVSK 215 (334)
T ss_dssp TSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSS---SSEEEEECSS
T ss_pred CCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCC---CeEEEEcCCC
Confidence 6543332 1111 1124799999999988887653 7899999885
No 307
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.27 E-value=0.00056 Score=58.37 Aligned_cols=218 Identities=16% Similarity=0.193 Sum_probs=125.4
Q ss_pred eEEcCCCCEEEEE-------------eCCeEEEEecCC--CcEEE--Eee-----cCcceeEEEEec--CCC-eEEEEec
Q 014755 13 SCFSPNARYIAVA-------------VDYRLVVRDAHS--FKVVQ--LFS-----CLDKISYIEWAL--DSE-YILCGLY 67 (419)
Q Consensus 13 ~~~s~d~~~la~~-------------~~~~i~i~~~~~--~~~~~--~~~-----~~~~v~~~~~s~--~~~-~l~~~~~ 67 (419)
+++.|+|..++++ .+|.|.++|..+ .+... ..+ ..-....+.+.+ ++. +|+++..
T Consensus 55 i~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh 134 (355)
T 3sre_A 55 LEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNH 134 (355)
T ss_dssp EEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEEC
T ss_pred eEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEEC
Confidence 7889988766665 367899999873 34332 221 123677888866 454 4544432
Q ss_pred c--CCeEEEEEccCCcce----eeeecC-CccEeEEEECCCCCEEEEEec----------------CCCeEEEEEcCCCe
Q 014755 68 K--RLMIQAWSLTQPEWT----CKIDEG-LAGIAYARWSPDSRHILTTSD----------------FQLRLTVWSLLNTA 124 (419)
Q Consensus 68 ~--~g~i~iw~~~~~~~~----~~~~~~-~~~v~~~~~~~~~~~l~~~~~----------------~~~~i~iwd~~~~~ 124 (419)
. +.+|.+|+++..... ..+.+. -...+.+.+.++|.+.++... ..+.|.-+|. ++
T Consensus 135 ~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~ 212 (355)
T 3sre_A 135 PGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--ND 212 (355)
T ss_dssp STTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TC
T ss_pred CCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--Ce
Confidence 2 358888887754222 222221 235789999999987776531 1224555544 33
Q ss_pred EEEeccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccC-CeE--EEEEeccccceeeeeECC-CCCeEEEEcCCCC
Q 014755 125 CVHVQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHT-WEI--MGVFAVDTLDLADIEWSP-DDSAIVIWDSPLE 200 (419)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~-~~~--~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~ 200 (419)
...+...-...+.++|+||++.++++... .+.|+.|++.. ++. .+.+ ........+++.+ +|+..+... -..
T Consensus 213 ~~~~~~~l~~pNGia~spDg~~lYvadt~--~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~-~~g 288 (355)
T 3sre_A 213 VRVVAEGFDFANGINISPDGKYVYIAELL--AHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCH-PNG 288 (355)
T ss_dssp CEEEEEEESSEEEEEECTTSSEEEEEEGG--GTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEE-SCH
T ss_pred EEEeecCCcccCcceECCCCCEEEEEeCC--CCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEec-CCc
Confidence 33222222345899999999999888754 36899999863 332 2233 2245577888988 588666421 123
Q ss_pred ceEEEEcCC---CceEEEEeec-CCCCceeEEEEccCCCeE
Q 014755 201 YKVLIYSPD---GRCLLKYQAY-ESGLGVKSISWSPCGQFL 237 (419)
Q Consensus 201 ~~i~~~d~~---~~~~~~~~~~-~~~~~v~~~~~s~~~~~l 237 (419)
+.|..|+.+ +..+..+... .....+..+ |..+|+.+
T Consensus 289 ~~v~~~~P~~~~~s~v~rI~~~~~~~~~v~~v-~~ddG~~l 328 (355)
T 3sre_A 289 MRIFFYDAENPPGSEVLRIQDILSEEPKVTVV-YAENGTVL 328 (355)
T ss_dssp HHHHSCCTTSCCCEEEEEEECTTSSSCEEEEE-EEECSSSC
T ss_pred eEEEEECCCCCCCCEEEEEEccCCCCcEEEEE-EEcCCCEE
Confidence 455555653 5555555431 111234444 55577654
No 308
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.26 E-value=0.0014 Score=56.45 Aligned_cols=226 Identities=12% Similarity=0.005 Sum_probs=116.3
Q ss_pred cCeEEcCCCCEEEEEeCCeEEEEecCCCc-EEEEe----ecCcceeEEEEecC---CCeEEEEecc---C----CeEEEE
Q 014755 11 GPSCFSPNARYIAVAVDYRLVVRDAHSFK-VVQLF----SCLDKISYIEWALD---SEYILCGLYK---R----LMIQAW 75 (419)
Q Consensus 11 ~~~~~s~d~~~la~~~~~~i~i~~~~~~~-~~~~~----~~~~~v~~~~~s~~---~~~l~~~~~~---~----g~i~iw 75 (419)
..++|.|||+++++-..+.|++++. +++ .+..+ ........|+++|+ +..|.++... + +.|..|
T Consensus 32 ~~ia~~pdG~l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~ 110 (354)
T 3a9g_A 32 WSIAPLGGGRYLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRG 110 (354)
T ss_dssp EEEEEEETTEEEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEE
T ss_pred eEEEEcCCCeEEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEE
Confidence 3489999998777666889998873 444 12111 12356889999998 5555544321 1 367777
Q ss_pred EccCC--c---c--e-eeeecC-CccEeEEEECCCCCEEEEEecCC------------CeEEEEEcCCC---------eE
Q 014755 76 SLTQP--E---W--T-CKIDEG-LAGIAYARWSPDSRHILTTSDFQ------------LRLTVWSLLNT---------AC 125 (419)
Q Consensus 76 ~~~~~--~---~--~-~~~~~~-~~~v~~~~~~~~~~~l~~~~~~~------------~~i~iwd~~~~---------~~ 125 (419)
+.... . . + ..+... ......++|.|||...++.+..+ +.|.-++.... ..
T Consensus 111 ~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~ 190 (354)
T 3a9g_A 111 RLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSP 190 (354)
T ss_dssp EECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCC
T ss_pred EECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCc
Confidence 76644 1 1 1 112211 12246799999998666644311 24554544322 01
Q ss_pred EEeccCCCCeeeEEEcc-CCCEEEEEeecCCCCeEEEEeccC--------C--------eEEEEEeccccceeeeeEC--
Q 014755 126 VHVQSPKHASKGVAFTQ-DGKFAAICTRRDCKDYINLLSCHT--------W--------EIMGVFAVDTLDLADIEWS-- 186 (419)
Q Consensus 126 ~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~g~v~i~d~~~--------~--------~~~~~~~~~~~~v~~~~~~-- 186 (419)
+...++ .....++|+| +++.+++-...+....|.+...-. + .++..+.........++|.
T Consensus 191 i~a~G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g 269 (354)
T 3a9g_A 191 IWSYGH-RNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHG 269 (354)
T ss_dssp EEEECC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCS
T ss_pred EEEEcc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECC
Confidence 111111 2346899999 555444432211111344332110 0 1111121112345667774
Q ss_pred -----CCCCeEEEEcCCCCceEEEEcCC--CceE--EEEeecCCCCceeEEEEccCCCeEEEEE
Q 014755 187 -----PDDSAIVIWDSPLEYKVLIYSPD--GRCL--LKYQAYESGLGVKSISWSPCGQFLAVGS 241 (419)
Q Consensus 187 -----~~~~~l~~~~~~~~~~i~~~d~~--~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 241 (419)
.+|.+++. + ...+.|..++++ ++.. ..+.. .....+..+++.|||.+.++..
T Consensus 270 ~~fp~~~G~l~v~-~-~~~~~v~~~~~~~~g~~~~~~~~~~-~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 270 DMFPGLRGWLLIA-C-LRGSMLAAVNFGDNMEVRKISTFFK-NVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp SSCGGGTTEEEEE-E-TTTTEEEEEEECGGGCEEEEEEECT-TTSCCEEEEEECTTSCEEEEEC
T ss_pred CCCcccCCcEEEE-E-cCCCEEEEEEECCCCcccceeeecc-CCCCCeeEEEECCCCcEEEEEe
Confidence 34544433 3 345788888874 3332 12211 1123688999999997655543
No 309
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.23 E-value=0.00018 Score=59.93 Aligned_cols=159 Identities=10% Similarity=0.114 Sum_probs=110.2
Q ss_pred cEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCC--------CCeeeEEE---ccCCCEEEEEeec-------
Q 014755 92 GIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPK--------HASKGVAF---TQDGKFAAICTRR------- 153 (419)
Q Consensus 92 ~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~--------~~~~~~~~---~~~~~~l~~~~~~------- 153 (419)
-..+++|.+....++.++-..++|..|+...+....+.... ..+..+.+ .|+++++++....
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTS
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccc
Confidence 35678998877778887755559999999866544431111 12478999 6887777754310
Q ss_pred ---CCCCeEEEEecc---CCeEEEEEecc-------------ccceeeeeECCCCCeEEEEcCCCC-ceEEEEcCCCceE
Q 014755 154 ---DCKDYINLLSCH---TWEIMGVFAVD-------------TLDLADIEWSPDDSAIVIWDSPLE-YKVLIYSPDGRCL 213 (419)
Q Consensus 154 ---~~~g~v~i~d~~---~~~~~~~~~~~-------------~~~v~~~~~~~~~~~l~~~~~~~~-~~i~~~d~~~~~~ 213 (419)
.+...|..||+. +++.+...... ......++..++|+..++ .+.. +.|..++.+|+.+
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt--~s~~~~~I~rV~pdG~~~ 171 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVA--FALGMPAIARVSADGKTV 171 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEE--EEESSCEEEEECTTSCCE
T ss_pred cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEe--CCCCCCeEEEEeCCCCEE
Confidence 113679999999 77776554421 124789999999998876 3445 7899999988755
Q ss_pred EEEeecC----CCCceeEEEEccCCCeEEEEEecCcEEEEEcC
Q 014755 214 LKYQAYE----SGLGVKSISWSPCGQFLAVGSYDQTLRVLNHL 252 (419)
Q Consensus 214 ~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~ 252 (419)
..+.... .....+.|+++|+|+.|++....+.+..+|+.
T Consensus 172 ~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 172 STFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp EEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred eeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 5442211 11246799999999988888779999999987
No 310
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.22 E-value=0.0021 Score=55.46 Aligned_cols=266 Identities=9% Similarity=0.039 Sum_probs=160.1
Q ss_pred CeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEE
Q 014755 70 LMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAI 149 (419)
Q Consensus 70 g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 149 (419)
..|.|.|+.++..+.+-.-. --+.-.+|..+.++.-. .. .+.++|+++.+.+.-......|.--.|-.+ +.|+.
T Consensus 48 ~~vvIiDl~~~~~~~rrpi~---AdsAIMnP~~~iiALra-g~-~lQiFnle~K~klks~~~~e~VvfWkWis~-~~l~l 121 (494)
T 1bpo_A 48 AQVVIIDMNDPSNPIRRPIS---ADSAIMNPASKVIALKA-GK-TLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTVAL 121 (494)
T ss_dssp CEEEEEETTSTTSCEEEECC---CSEEEECSSSSCEEEEE-TT-EEEEEETTTTEEEEEEECSSCCCEEEEEET-TEEEE
T ss_pred CeEEEEECCCCCcceecccc---cceeeeCCCCcEEEEec-CC-eEEEEchHHhhhhcceecCCCceEEEecCC-CeEEE
Confidence 48999999887654322111 12344578888777665 33 999999999988884444556666666544 45666
Q ss_pred EeecCCCCeEEEEeccC-CeEEEEEecc----ccceeeeeECCCCCeEEEEcCC-----CCceEEEEcCCCceEEEEeec
Q 014755 150 CTRRDCKDYINLLSCHT-WEIMGVFAVD----TLDLADIEWSPDDSAIVIWDSP-----LEYKVLIYSPDGRCLLKYQAY 219 (419)
Q Consensus 150 ~~~~~~~g~v~i~d~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~~-----~~~~i~~~d~~~~~~~~~~~~ 219 (419)
.+. ..|+-|++.. ..+.+.+..| ...|.....+++.+++++...+ ..|.+.+|+.+.+.-+.+.+|
T Consensus 122 VT~----taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGh 197 (494)
T 1bpo_A 122 VTD----NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGH 197 (494)
T ss_dssp ECS----SEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCS
T ss_pred EcC----CeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheee
Confidence 554 4899999974 3455566554 3567888889999998863222 348899999987777878776
Q ss_pred CCCCceeEEEEccCC-----CeEEEEEec---CcEEEEEcCCc-eeeeeecccccccCCCccceeccCCCcccccceeee
Q 014755 220 ESGLGVKSISWSPCG-----QFLAVGSYD---QTLRVLNHLTW-KTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELC 290 (419)
Q Consensus 220 ~~~~~v~~~~~s~~~-----~~l~~~~~d---~~i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (419)
.. .. ..+-.+| +.++.+... +.++|.++... ..-..+... .+ .+.|.+
T Consensus 198 aa--~F--~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk-~v-----dv~fpp------------- 254 (494)
T 1bpo_A 198 AA--SF--AQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKK-AV-----DVFFPP------------- 254 (494)
T ss_dssp EE--EE--EEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCE-EE-----ECCCCT-------------
T ss_pred ee--ee--EEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccce-ee-----eeeCCc-------------
Confidence 43 22 2222222 234444332 56777776431 000011000 00 011110
Q ss_pred ccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCce
Q 014755 291 LNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPA 370 (419)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~ 370 (419)
....+.-.++..|+.-..+..-+.- |.|++||++++.++
T Consensus 255 ---------------------------------------e~~~DFPvamqvs~kygviyviTK~--G~i~lyDleTgt~i 293 (494)
T 1bpo_A 255 ---------------------------------------EAQNDFPVAMQISEKHDVVFLITKY--GYIHLYDLETGTCI 293 (494)
T ss_dssp ---------------------------------------TSTTCCEEEEEEETTTTEEEEEETT--SEEEEEETTTCCEE
T ss_pred ---------------------------------------ccccCceeEEEecccCCEEEEEecC--ceEEEEecccceee
Confidence 0122334578888887777777777 99999999999988
Q ss_pred eecc-cCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCe
Q 014755 371 AILV-QKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAY 409 (419)
Q Consensus 371 ~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~ 409 (419)
..-. ....|...+-+....=++.....|.|.--.++...
T Consensus 294 ~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 294 YMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp EEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTT
T ss_pred eeecccCCceEEecccCCCCcEEEEccCceEEEEEEcccc
Confidence 6654 44455544444444445555577776666655443
No 311
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.22 E-value=0.0016 Score=53.92 Aligned_cols=265 Identities=9% Similarity=0.033 Sum_probs=159.9
Q ss_pred CeEEEEEccCCcceeee-ecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEE
Q 014755 70 LMIQAWSLTQPEWTCKI-DEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAA 148 (419)
Q Consensus 70 g~i~iw~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 148 (419)
..|.|.|+.++..+.+- ...+ +.-.+|..+.++.-. .. .+.++|+++++.+.-......|.--.|-.+ +.|+
T Consensus 49 ~~VvIiDl~n~~~~~Rrpi~Ad----sAIMnP~~~ViALra-g~-~LQiFnletK~klks~~~~e~VvfWkWis~-~~L~ 121 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRPISAD----SAIMNPASKVIALKA-GK-TLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTVA 121 (365)
T ss_dssp EEEEEEETTSTTSCEEEECCCS----EEEECSSSSEEEEEE-TT-EEEEEETTTTEEEEEEECSSCEEEEEECSS-SEEE
T ss_pred CEEEEEECCCCCCccccccccc----eeeeCCCccEEEEec-CC-eEEEechHHhhhhcceecCCccEEEEecCC-CeEE
Confidence 47999999887654332 1222 233488888777765 33 899999999988884444567766677544 4555
Q ss_pred EEeecCCCCeEEEEeccC-CeEEEEEecc----ccceeeeeECCCCCeEEEEcCC-----CCceEEEEcCCCceEEEEee
Q 014755 149 ICTRRDCKDYINLLSCHT-WEIMGVFAVD----TLDLADIEWSPDDSAIVIWDSP-----LEYKVLIYSPDGRCLLKYQA 218 (419)
Q Consensus 149 ~~~~~~~~g~v~i~d~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~~-----~~~~i~~~d~~~~~~~~~~~ 218 (419)
..+. ..|+-|++.. ..+.+.+..| ...|.....+++.+++++.... ..|.+.+|+.+.+.-+.+++
T Consensus 122 lVT~----taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieG 197 (365)
T 2xzh_A 122 LVTD----NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEG 197 (365)
T ss_dssp EEES----SEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECC
T ss_pred EEcC----CcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeee
Confidence 5554 4899999975 4555556554 3567788889999988763222 24889999998888888877
Q ss_pred cCCCCceeEEEEccCC-----CeEEEEEec---CcEEEEEcCCc-eeeeeecccccccCCCccceeccCCCcccccceee
Q 014755 219 YESGLGVKSISWSPCG-----QFLAVGSYD---QTLRVLNHLTW-KTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSEL 289 (419)
Q Consensus 219 ~~~~~~v~~~~~s~~~-----~~l~~~~~d---~~i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (419)
|.. .-..+-.+| +.++.+... +.+++.++... ..-..+.
T Consensus 198 haa----~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~---------------------------- 245 (365)
T 2xzh_A 198 HAA----SFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFP---------------------------- 245 (365)
T ss_dssp SEE----EEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCC----------------------------
T ss_pred eee----eeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcc----------------------------
Confidence 642 112232232 234444432 46777776321 0000110
Q ss_pred eccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCc
Q 014755 290 CLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEP 369 (419)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~ 369 (419)
+...++...+ +...+.-.++..|+.-..+..-+.- |.|++||++++.+
T Consensus 246 ------------------kk~vdi~fpp------------ea~~DFPVamqvs~kygviyviTK~--G~ihlyDleTgt~ 293 (365)
T 2xzh_A 246 ------------------KKAVDVFFPP------------EAQNDFPVAMQISEKHDVVFLITKY--GYIHLYDLETGTC 293 (365)
T ss_dssp ------------------CEEEEECCCT------------TCTTCCEEEEEEETTTTEEEEEETT--SEEEEEETTTCCE
T ss_pred ------------------cccceeeCCc------------cccCCceEEEEecccCCEEEEEeCC--cEEEEEEcccCcE
Confidence 0000000000 0122334577888877777777777 9999999999998
Q ss_pred eeecc-cCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCe
Q 014755 370 AAILV-QKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAY 409 (419)
Q Consensus 370 ~~~~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~ 409 (419)
+..-. -...|...+-+.+..=++.....|.|.--.++...
T Consensus 294 i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~ 334 (365)
T 2xzh_A 294 IYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 334 (365)
T ss_dssp EEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTT
T ss_pred EEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECccc
Confidence 86654 44455444443333334455577776666655443
No 312
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.21 E-value=0.0007 Score=56.95 Aligned_cols=233 Identities=11% Similarity=0.020 Sum_probs=120.3
Q ss_pred CCCCEEEEEe-C------CeEEEEecCCCcEEEEeecC-cceeEEEEecCCCeEEEEeccC----CeEEEEEccCCc---
Q 014755 17 PNARYIAVAV-D------YRLVVRDAHSFKVVQLFSCL-DKISYIEWALDSEYILCGLYKR----LMIQAWSLTQPE--- 81 (419)
Q Consensus 17 ~d~~~la~~~-~------~~i~i~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~~~----g~i~iw~~~~~~--- 81 (419)
-++++++.|+ . ..+.+||..+.+........ ..........+++.++.|+.+. ..+.+||+.+.+
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~ 92 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGV 92 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCC
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCe
Confidence 3556666665 2 35889999887755532211 1111222233667777776431 368999998877
Q ss_pred ceeeeecC--CccEeEEEECCCCCEEEEEecCC----CeEEEEEcCCCeEEEeccCCCC-eeeEEEccCCCEEEEEeecC
Q 014755 82 WTCKIDEG--LAGIAYARWSPDSRHILTTSDFQ----LRLTVWSLLNTACVHVQSPKHA-SKGVAFTQDGKFAAICTRRD 154 (419)
Q Consensus 82 ~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~~~----~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~ 154 (419)
....-... ......+.. +++.++.++.++ ..+.+||+.+.+...+.....+ ....+..-+++.++.|+.+.
T Consensus 93 W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 170 (301)
T 2vpj_A 93 WYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDG 170 (301)
T ss_dssp CEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCS
T ss_pred eEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCC
Confidence 54331111 111122222 566666665332 2689999999887664322222 22222223667777766542
Q ss_pred C--CCeEEEEeccCCeEEEE--EeccccceeeeeECCCCCeEEEEcCCC----CceEEEEcCCCceEEEEeecCCCCcee
Q 014755 155 C--KDYINLLSCHTWEIMGV--FAVDTLDLADIEWSPDDSAIVIWDSPL----EYKVLIYSPDGRCLLKYQAYESGLGVK 226 (419)
Q Consensus 155 ~--~g~v~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~v~ 226 (419)
. ...+.+||+.+.+-... +.........+.+ +++.+++ .+.. ...+.+||+....-..+........-.
T Consensus 171 ~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~-GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~ 247 (301)
T 2vpj_A 171 LNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVV-GGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYV 247 (301)
T ss_dssp SCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEE-CCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSC
T ss_pred CcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEE-eCCCCCcccceEEEEeCCCCcEEECCCCCCcccce
Confidence 1 24689999887654332 2111111222222 4444444 2222 256899999444444443222111111
Q ss_pred EEEEccCCCeEEEEEec-----CcEEEEEcCCce
Q 014755 227 SISWSPCGQFLAVGSYD-----QTLRVLNHLTWK 255 (419)
Q Consensus 227 ~~~~s~~~~~l~~~~~d-----~~i~v~d~~~~~ 255 (419)
+++ .-+++.++.|+.+ ..+.+||+++.+
T Consensus 248 ~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 248 GAT-VLRGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp EEE-EETTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred eEE-EECCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 222 2267777777755 357888887643
No 313
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.14 E-value=0.0013 Score=55.35 Aligned_cols=230 Identities=8% Similarity=-0.031 Sum_probs=119.2
Q ss_pred CCEEEEEe---CCeEEEEecCCCcEEEEeecC-cceeEEEEecCCCeEEEEecc---CCeEEEEEccCCcceeeeecCC-
Q 014755 19 ARYIAVAV---DYRLVVRDAHSFKVVQLFSCL-DKISYIEWALDSEYILCGLYK---RLMIQAWSLTQPEWTCKIDEGL- 90 (419)
Q Consensus 19 ~~~la~~~---~~~i~i~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~~---~g~i~iw~~~~~~~~~~~~~~~- 90 (419)
+.++++|+ ...+.+||..+.+....-.-. ......+..-++..++.|+.+ -..+.+||+.+.+....-....
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 91 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP 91 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc
Confidence 34555565 346999999988765532211 111111222366677777643 1378899998886543321111
Q ss_pred -ccEeEEEECCCCCEEEEEecC-C----CeEEEEEcCCCeEEEeccCCCC-eeeEEEccCCCEEEEEeecCC------CC
Q 014755 91 -AGIAYARWSPDSRHILTTSDF-Q----LRLTVWSLLNTACVHVQSPKHA-SKGVAFTQDGKFAAICTRRDC------KD 157 (419)
Q Consensus 91 -~~v~~~~~~~~~~~l~~~~~~-~----~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~------~g 157 (419)
.....+. -+++.++.++.+ + ..+.+||..+.+...+.....+ ....+..-+++.++.++.+.. ..
T Consensus 92 r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 169 (306)
T 3ii7_A 92 RDSLAACA--AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLN 169 (306)
T ss_dssp CBSCEEEE--ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECC
T ss_pred ccceeEEE--ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccc
Confidence 1112222 266666776643 1 2689999999887764332222 222222236667777665422 24
Q ss_pred eEEEEeccCCeEEEEE--eccccceeeeeECCCCCeEEEEcCCC----CceEEEEcCCCceEEEEeecCCC-CceeEEEE
Q 014755 158 YINLLSCHTWEIMGVF--AVDTLDLADIEWSPDDSAIVIWDSPL----EYKVLIYSPDGRCLLKYQAYESG-LGVKSISW 230 (419)
Q Consensus 158 ~v~i~d~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~~~~-~~v~~~~~ 230 (419)
.+.+||+.+.+-...- .........+.+ +++.+++ .+.. -..+.+||+....-..+...... .....+.+
T Consensus 170 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~-GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 246 (306)
T 3ii7_A 170 SCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAV-GGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV 246 (306)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEE-CCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE
T ss_pred eEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEE-eCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE
Confidence 6899999876543321 111111122222 4444444 2211 14688999844433333222111 11222233
Q ss_pred ccCCCeEEEEEec-----CcEEEEEcCCce
Q 014755 231 SPCGQFLAVGSYD-----QTLRVLNHLTWK 255 (419)
Q Consensus 231 s~~~~~l~~~~~d-----~~i~v~d~~~~~ 255 (419)
+++.++.|+.+ ..+.+||+.+.+
T Consensus 247 --~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 247 --GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp --TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred --CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 67778888754 468888887643
No 314
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.13 E-value=0.0015 Score=54.95 Aligned_cols=231 Identities=10% Similarity=0.028 Sum_probs=119.9
Q ss_pred CCCEEEEEe-C----CeEEEEecCCCcEEEEeecCc-c-eeEEEEecCCCeEEEEeccC----CeEEEEEccCCcceeee
Q 014755 18 NARYIAVAV-D----YRLVVRDAHSFKVVQLFSCLD-K-ISYIEWALDSEYILCGLYKR----LMIQAWSLTQPEWTCKI 86 (419)
Q Consensus 18 d~~~la~~~-~----~~i~i~~~~~~~~~~~~~~~~-~-v~~~~~s~~~~~l~~~~~~~----g~i~iw~~~~~~~~~~~ 86 (419)
++.+++.|+ + ..+.+||..+.+....-.... . -.+++ .-+++.++.|+.+. ..+.+||..+.+....-
T Consensus 15 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 15 PKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMV-YMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA 93 (302)
T ss_dssp CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE-EETTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred CCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEE-EECCEEEEEeCcCCCccccceEEECCCCCceeeCC
Confidence 455666665 2 358899998877555422111 1 11222 22666777776431 25889999887654322
Q ss_pred ecC--CccEeEEEECCCCCEEEEEecCC----CeEEEEEcCCCeEEEeccCCCCe-eeEEEccCCCEEEEEeecCC----
Q 014755 87 DEG--LAGIAYARWSPDSRHILTTSDFQ----LRLTVWSLLNTACVHVQSPKHAS-KGVAFTQDGKFAAICTRRDC---- 155 (419)
Q Consensus 87 ~~~--~~~v~~~~~~~~~~~l~~~~~~~----~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~---- 155 (419)
... ......+. -+++.++.++.++ ..+.+||+.+.+...+.....+. ...+..-+++.++.|+.+..
T Consensus 94 ~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 171 (302)
T 2xn4_A 94 NMRDRRSTLGAAV--LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQC 171 (302)
T ss_dssp CCSSCCBSCEEEE--ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEE
T ss_pred CCCccccceEEEE--ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCcc
Confidence 111 11112222 2667777776442 25788999998877643322222 11222235667777665432
Q ss_pred CCeEEEEeccCCeEEEE--EeccccceeeeeECCCCCeEEEEcCCC----CceEEEEcCCCceEEEEeecCCCCceeEEE
Q 014755 156 KDYINLLSCHTWEIMGV--FAVDTLDLADIEWSPDDSAIVIWDSPL----EYKVLIYSPDGRCLLKYQAYESGLGVKSIS 229 (419)
Q Consensus 156 ~g~v~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~ 229 (419)
...+.+||+.+.+-... +.........+.+ +++.+++ .+.. ...+.+||+....-..+........-.+++
T Consensus 172 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~-GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~ 248 (302)
T 2xn4_A 172 LSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAV-GGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVC 248 (302)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEE-CCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE
T ss_pred ccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEE-CCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEE
Confidence 24689999987554332 2211111222222 4444444 2221 246899999544444443222211111222
Q ss_pred EccCCCeEEEEEecC-----cEEEEEcCCce
Q 014755 230 WSPCGQFLAVGSYDQ-----TLRVLNHLTWK 255 (419)
Q Consensus 230 ~s~~~~~l~~~~~d~-----~i~v~d~~~~~ 255 (419)
.-+++.++.|+.++ .+.+||+.+.+
T Consensus 249 -~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 249 -AVNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp -EETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred -EECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 23677777777653 48888887654
No 315
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.13 E-value=0.0033 Score=54.15 Aligned_cols=150 Identities=13% Similarity=0.127 Sum_probs=82.0
Q ss_pred CcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceee---e----ecCCccEeEEEECCC---CCEEEEEecC-----
Q 014755 47 LDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCK---I----DEGLAGIAYARWSPD---SRHILTTSDF----- 111 (419)
Q Consensus 47 ~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~---~----~~~~~~v~~~~~~~~---~~~l~~~~~~----- 111 (419)
-.....|+|.|+|+.|+++... |.|++++.. +..... + .........++|+|+ +..|+++...
T Consensus 17 l~~P~~i~~~pdG~~l~V~e~~-G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g 94 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLITLRG-GELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDG 94 (353)
T ss_dssp ESSEEEEEECSTTCCEEEEETT-TEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSS
T ss_pred CCCcEEEEEcCCCCEEEEEeCC-ceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCC
Confidence 4467899999999934444444 899999853 322111 1 122345789999996 5555555321
Q ss_pred --CCeEEEEEcCCC-----eEEE-eccC------CCCeeeEEEccCCCEEEEEeec----------CCCCeEEEEeccCC
Q 014755 112 --QLRLTVWSLLNT-----ACVH-VQSP------KHASKGVAFTQDGKFAAICTRR----------DCKDYINLLSCHTW 167 (419)
Q Consensus 112 --~~~i~iwd~~~~-----~~~~-~~~~------~~~~~~~~~~~~~~~l~~~~~~----------~~~g~v~i~d~~~~ 167 (419)
...|..+++..+ .... +... .+....++|.|||.+.++.+.. ...|.|.-++.+..
T Consensus 95 ~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 95 KAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp CEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred CceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 125777776542 1111 2111 1224689999999554444321 11256777776532
Q ss_pred e------------EEEEEeccccceeeeeECCCCCeEEEEcCC
Q 014755 168 E------------IMGVFAVDTLDLADIEWSPDDSAIVIWDSP 198 (419)
Q Consensus 168 ~------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 198 (419)
- ....+...-.....++|.|+...|.+.+..
T Consensus 175 ~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g 217 (353)
T 2g8s_A 175 IPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHG 217 (353)
T ss_dssp CCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEEC
T ss_pred CCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecC
Confidence 0 111222222346789999944445554433
No 316
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.01 E-value=0.0019 Score=54.27 Aligned_cols=239 Identities=8% Similarity=-0.015 Sum_probs=120.2
Q ss_pred CCCEEEEEe-cC----CCeEEEEEcCCCeEEEeccCCCC-eeeEEEccCCCEEEEEeecC--CCCeEEEEeccCCe----
Q 014755 101 DSRHILTTS-DF----QLRLTVWSLLNTACVHVQSPKHA-SKGVAFTQDGKFAAICTRRD--CKDYINLLSCHTWE---- 168 (419)
Q Consensus 101 ~~~~l~~~~-~~----~~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~--~~g~v~i~d~~~~~---- 168 (419)
++..++.++ .+ -..+.+||+.+++...+...+.+ ....+...++..++.|+.++ ....+.+||+.+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W 93 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVW 93 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCee
Confidence 445555555 22 12688999999887764322222 22222334566777776532 11368999987744
Q ss_pred -EEEEEeccccceeeeeECCCCCeEEEEcCCC----CceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEec
Q 014755 169 -IMGVFAVDTLDLADIEWSPDDSAIVIWDSPL----EYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYD 243 (419)
Q Consensus 169 -~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 243 (419)
.+..+.........+.+ +++.+++ .+.. ...+.+||+....-..+........-.+++. -+++.++.|+.+
T Consensus 94 ~~~~~~p~~r~~~~~~~~--~~~lyv~-GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~ 169 (301)
T 2vpj_A 94 YSVAPMNVRRGLAGATTL--GDMIYVS-GGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV-ASGVIYCLGGYD 169 (301)
T ss_dssp EEECCCSSCCBSCEEEEE--TTEEEEE-CCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE-ETTEEEEECCBC
T ss_pred EECCCCCCCccceeEEEE--CCEEEEE-cccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE-ECCEEEEECCCC
Confidence 33222222122222222 4444444 2221 2468999984433333332222111122222 266777777654
Q ss_pred -----CcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCC
Q 014755 244 -----QTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPI 318 (419)
Q Consensus 244 -----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (419)
..+.+||+.+.+-...-..+
T Consensus 170 ~~~~~~~~~~~d~~~~~W~~~~~~p------------------------------------------------------- 194 (301)
T 2vpj_A 170 GLNILNSVEKYDPHTGHWTNVTPMA------------------------------------------------------- 194 (301)
T ss_dssp SSCBCCCEEEEETTTTEEEEECCCS-------------------------------------------------------
T ss_pred CCcccceEEEEeCCCCcEEeCCCCC-------------------------------------------------------
Confidence 34677776554321110000
Q ss_pred CCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCC---CceEEEeeccCCCceeecc--cC-CCeeEEEeCCCCCeEE
Q 014755 319 SLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSM---PTTLWIWDICRQEPAAILV--QK-DPIRAATWDPTCTRLV 392 (419)
Q Consensus 319 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~---~~~i~iwd~~~~~~~~~~~--~~-~~v~~~~~s~~~~~l~ 392 (419)
........+. -++++++.|+.+. ...+.+||+.+.+...... .. .....+.+ ++++++
T Consensus 195 ------------~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v 258 (301)
T 2vpj_A 195 ------------TKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYA 258 (301)
T ss_dssp ------------SCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEE
T ss_pred ------------cccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEE
Confidence 0000111222 3677878876531 1468999998876554432 11 11122333 677777
Q ss_pred EEeCC-----CcEEEeecCCCeEEecC
Q 014755 393 LCTGS-----SHLYMWTPSGAYCVSNP 414 (419)
Q Consensus 393 s~~~d-----g~i~vw~~~~~~~~~~~ 414 (419)
.|+.+ ..+.+||+++.+...++
T Consensus 259 ~GG~~~~~~~~~v~~yd~~~~~W~~~~ 285 (301)
T 2vpj_A 259 IAGYDGNSLLSSIECYDPIIDSWEVVT 285 (301)
T ss_dssp ECCBCSSSBEEEEEEEETTTTEEEEEE
T ss_pred EcCcCCCcccccEEEEcCCCCeEEEcC
Confidence 77765 35789999988776543
No 317
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.98 E-value=0.018 Score=57.63 Aligned_cols=227 Identities=10% Similarity=-0.053 Sum_probs=134.5
Q ss_pred CEEEEEeCCeEEEEecCCCc--EEEEeecCcceeEEEEecCCCeEEEEecc-----------------------------
Q 014755 20 RYIAVAVDYRLVVRDAHSFK--VVQLFSCLDKISYIEWALDSEYILCGLYK----------------------------- 68 (419)
Q Consensus 20 ~~la~~~~~~i~i~~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~~----------------------------- 68 (419)
.-++..+++.++|..++..+ .++.+.-...+..++++|+.+.++.+..+
T Consensus 707 ~g~v~~~~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (1158)
T 3ei3_A 707 DSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSS 786 (1158)
T ss_dssp TEEEEECSSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCC
T ss_pred CcEEEEcCCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhccccc
Confidence 34555666678887765433 23344555678888888877766554321
Q ss_pred -------------------CCeEEEEEccCCcceeeeecCC-ccEeEEE---ECCC-CCEEEEEec---------CCCeE
Q 014755 69 -------------------RLMIQAWSLTQPEWTCKIDEGL-AGIAYAR---WSPD-SRHILTTSD---------FQLRL 115 (419)
Q Consensus 69 -------------------~g~i~iw~~~~~~~~~~~~~~~-~~v~~~~---~~~~-~~~l~~~~~---------~~~~i 115 (419)
.+.|++.|..+.+.+..+.-.. ..+.+++ |..+ ..++++|.. ..|.|
T Consensus 787 ~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri 866 (1158)
T 3ei3_A 787 KLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRI 866 (1158)
T ss_dssp CCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEE
T ss_pred ccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEE
Confidence 1246677766666544443222 2344444 4333 467777651 24689
Q ss_pred EEEEcCCCeEEE--eccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEE
Q 014755 116 TVWSLLNTACVH--VQSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIV 193 (419)
Q Consensus 116 ~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 193 (419)
.+|++..++... ....++.+++++-- +| +|+++-. .+|++|++...+.++.-...-..+..+.....+.+++
T Consensus 867 ~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g-~Lla~ig----~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~ 940 (1158)
T 3ei3_A 867 VVFQYSDGKLQTVAEKEVKGAVYSMVEF-NG-KLLASIN----STVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFIL 940 (1158)
T ss_dssp EEEEEETTEEEEEEEEEESSCEEEEEEE-TT-EEEEEET----TEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEE
T ss_pred EEEEEECCEEEEEEEEEcCCcCEEEeee-CC-EEEEEcC----CEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEE
Confidence 999998665444 33445667776643 34 5555543 5899999987554431111111122223333577888
Q ss_pred EEcCCCCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCC
Q 014755 194 IWDSPLEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLT 253 (419)
Q Consensus 194 ~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~ 253 (419)
+.|....-.+..|+.....+..+.......+++++.+-.++ .++.+..+|.+.++....
T Consensus 941 vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 941 VGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDD-NFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETT-EEEEEETTSEEEEEEECT
T ss_pred EEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccC-cEEEEcCCCcEEEEecCC
Confidence 87766555555677755555566555555578888887654 677788889999887653
No 318
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.98 E-value=0.0032 Score=52.94 Aligned_cols=69 Identities=4% Similarity=-0.027 Sum_probs=44.4
Q ss_pred CCeEEEEecCCC---CceEEEeeccCCCceeecc--cCC-CeeEEEeCCCCCeEEEEeCCC-----cEEEeecCCCeEEe
Q 014755 344 DSQYICTRNDSM---PTTLWIWDICRQEPAAILV--QKD-PIRAATWDPTCTRLVLCTGSS-----HLYMWTPSGAYCVS 412 (419)
Q Consensus 344 ~g~~l~~~~~d~---~~~i~iwd~~~~~~~~~~~--~~~-~v~~~~~s~~~~~l~s~~~dg-----~i~vw~~~~~~~~~ 412 (419)
++++++.|+.+. ...+.+||..+.+...... ... .-..+.+ ++++++.|+.++ .+.+||+++.+...
T Consensus 204 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 281 (302)
T 2xn4_A 204 NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV--NGLLYVVGGDDGSCNLASVEYYNPTTDKWTV 281 (302)
T ss_dssp TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE--CCEEEEECCcCCCcccccEEEEcCCCCeEEE
Confidence 678888877541 1469999998876544332 111 1112222 677777777653 48999999998887
Q ss_pred cC
Q 014755 413 NP 414 (419)
Q Consensus 413 ~~ 414 (419)
+|
T Consensus 282 ~~ 283 (302)
T 2xn4_A 282 VS 283 (302)
T ss_dssp CS
T ss_pred CC
Confidence 76
No 319
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.97 E-value=0.0027 Score=54.22 Aligned_cols=196 Identities=14% Similarity=0.065 Sum_probs=114.2
Q ss_pred cceeEEEEecCCCeEEEEe-----------ccCCeEEEEEccCC--cce-eeeec-----CCccEeEEEECC--CCC-EE
Q 014755 48 DKISYIEWALDSEYILCGL-----------YKRLMIQAWSLTQP--EWT-CKIDE-----GLAGIAYARWSP--DSR-HI 105 (419)
Q Consensus 48 ~~v~~~~~s~~~~~l~~~~-----------~~~g~i~iw~~~~~--~~~-~~~~~-----~~~~v~~~~~~~--~~~-~l 105 (419)
.....++..|+|..+++++ ..+|.|.++|+.+. +.. ..+.+ .......+.+.+ ++. +|
T Consensus 50 ~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 50 NGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp SCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 3466778888875544431 13489999998743 221 12222 123567777755 454 56
Q ss_pred EEEecC--CCeEEEEEcCC--CeEEE---eccC-CCCeeeEEEccCCCEEEEEee--------------cCCCCeEEEEe
Q 014755 106 LTTSDF--QLRLTVWSLLN--TACVH---VQSP-KHASKGVAFTQDGKFAAICTR--------------RDCKDYINLLS 163 (419)
Q Consensus 106 ~~~~~~--~~~i~iwd~~~--~~~~~---~~~~-~~~~~~~~~~~~~~~l~~~~~--------------~~~~g~v~i~d 163 (419)
+++... +..+.+|++.. +.... +... -...+.+.+.++|.+.++... ....|.|+.+|
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d 209 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS 209 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEE
Confidence 666432 34788887764 33332 2221 223588999999986665431 01125666676
Q ss_pred ccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC--CCceE--EEEeecCCCCceeEEEEcc-CCCeEE
Q 014755 164 CHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP--DGRCL--LKYQAYESGLGVKSISWSP-CGQFLA 238 (419)
Q Consensus 164 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~--~~~~~--~~~~~~~~~~~v~~~~~s~-~~~~l~ 238 (419)
.. + +..+...-...+.++|+||++.+++.+. ..+.|+.|++ +++.. +.+.. ....-.+++++ +|++.+
T Consensus 210 ~~--~-~~~~~~~l~~pNGia~spDg~~lYvadt-~~~~I~~~~~~~~g~l~~~~~~~~---~g~PDGi~vD~e~G~lwv 282 (355)
T 3sre_A 210 PN--D-VRVVAEGFDFANGINISPDGKYVYIAEL-LAHKIHVYEKHANWTLTPLRVLSF---DTLVDNISVDPVTGDLWV 282 (355)
T ss_dssp TT--C-CEEEEEEESSEEEEEECTTSSEEEEEEG-GGTEEEEEEECTTSCEEEEEEEEC---SSEEEEEEECTTTCCEEE
T ss_pred CC--e-EEEeecCCcccCcceECCCCCEEEEEeC-CCCeEEEEEECCCCcEecCEEEeC---CCCCceEEEeCCCCcEEE
Confidence 53 2 2223333345789999999999998764 3688999998 34332 22321 23678899999 588777
Q ss_pred EEEec-CcEEEEE
Q 014755 239 VGSYD-QTLRVLN 250 (419)
Q Consensus 239 ~~~~d-~~i~v~d 250 (419)
++..+ +.|..|+
T Consensus 283 a~~~~g~~v~~~~ 295 (355)
T 3sre_A 283 GCHPNGMRIFFYD 295 (355)
T ss_dssp EEESCHHHHHSCC
T ss_pred EecCCceEEEEEC
Confidence 66533 3444444
No 320
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.96 E-value=0.007 Score=52.04 Aligned_cols=143 Identities=15% Similarity=0.104 Sum_probs=81.0
Q ss_pred CccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCe-EEE-ec---cCCCCeeeEEEccC---CCEEEEEeec-CCC----
Q 014755 90 LAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTA-CVH-VQ---SPKHASKGVAFTQD---GKFAAICTRR-DCK---- 156 (419)
Q Consensus 90 ~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~-~~~-~~---~~~~~~~~~~~~~~---~~~l~~~~~~-~~~---- 156 (419)
-.....++|.|+|+. +++...+ .|.+++ .+++ .+. +. ........++++|+ +..|+++... ...
T Consensus 28 l~~P~~ia~~pdG~l-~V~e~~g-~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRY-LVTERPG-RLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp CSCEEEEEEEETTEE-EEEETTT-EEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCCCeEEEEcCCCeE-EEEeCCC-EEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 345789999999984 4444444 899887 4454 111 11 12345689999998 5555554431 011
Q ss_pred CeEEEEeccCC-------eEE-EEEec-cccceeeeeECCCCCeEEEEcCC------------CCceEEEEcCCCce---
Q 014755 157 DYINLLSCHTW-------EIM-GVFAV-DTLDLADIEWSPDDSAIVIWDSP------------LEYKVLIYSPDGRC--- 212 (419)
Q Consensus 157 g~v~i~d~~~~-------~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~~~------------~~~~i~~~d~~~~~--- 212 (419)
..|..++.... +.+ ..+.. .......++|.|||.+++. .+. ..+.|..++.+|+.
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt-~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~ 183 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYIT-TGDAADPRLAQDLSSLAGKILRVDEEGRPPAD 183 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEE-CCCTTCGGGGTCTTCCSSEEEEECTTSCCCTT
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEE-ECCCCCCccccCCCCCCeEEEEEcCCCCCCCC
Confidence 36777776643 111 11221 1123567999999975554 221 12678888886641
Q ss_pred -----EEEE-eecCCCCceeEEEEcc-CCCeEEE
Q 014755 213 -----LLKY-QAYESGLGVKSISWSP-CGQFLAV 239 (419)
Q Consensus 213 -----~~~~-~~~~~~~~v~~~~~s~-~~~~l~~ 239 (419)
...+ .++. ....++|+| +|+++++
T Consensus 184 npf~~~~i~a~G~r---np~Gla~d~~~g~l~v~ 214 (354)
T 3a9g_A 184 NPFPNSPIWSYGHR---NPQGIDWHRASGVMVAT 214 (354)
T ss_dssp SSSTTCCEEEECCS---CCCEEEECTTTCCEEEE
T ss_pred CCCCCCcEEEEccC---CcceEEEeCCCCCEEEE
Confidence 1111 1222 367899999 5654444
No 321
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.88 E-value=0.0041 Score=52.43 Aligned_cols=234 Identities=9% Similarity=-0.063 Sum_probs=120.6
Q ss_pred EEcCCCCEEEEEe-C----CeEEEEecCCCcEEEEeecC--cceeEEEEecCCCeEEEEec----c----CCeEEEEEcc
Q 014755 14 CFSPNARYIAVAV-D----YRLVVRDAHSFKVVQLFSCL--DKISYIEWALDSEYILCGLY----K----RLMIQAWSLT 78 (419)
Q Consensus 14 ~~s~d~~~la~~~-~----~~i~i~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~----~----~g~i~iw~~~ 78 (419)
+..-++++++.|+ . ..+.+||..+.+....-... ..-.+++ .-+++.++.|+. + ...+.+||+.
T Consensus 20 ~~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~ 98 (308)
T 1zgk_A 20 APKVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGC-VVGGLLYAVGGRNNSPDGNTDSSALDCYNPM 98 (308)
T ss_dssp -CCCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEE-EETTEEEEECCEEEETTEEEECCCEEEEETT
T ss_pred ccCCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEE-EECCEEEEECCCcCCCCCCeecceEEEECCC
Confidence 3445677777776 1 35889999888765542211 1111222 236667777664 2 1258899988
Q ss_pred CCcceeeee--cCCccEeEEEECCCCCEEEEEecCC----CeEEEEEcCCCeEEEeccCCCCe--eeEEEccCCCEEEEE
Q 014755 79 QPEWTCKID--EGLAGIAYARWSPDSRHILTTSDFQ----LRLTVWSLLNTACVHVQSPKHAS--KGVAFTQDGKFAAIC 150 (419)
Q Consensus 79 ~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~----~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~ 150 (419)
+.+....-. ........+.+ +++.++.++.++ ..+.+||+.+.+...+.....+. .+++. -+++.++.|
T Consensus 99 ~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~G 175 (308)
T 1zgk_A 99 TNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAV-LNRLLYAVG 175 (308)
T ss_dssp TTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEEC
T ss_pred CCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEE-ECCEEEEEe
Confidence 876543211 11111222222 666666665321 26889999998877643222222 22222 256667776
Q ss_pred eecCC--CCeEEEEeccCCeEEEE--EeccccceeeeeECCCCCeEEEEcCCC----CceEEEEcCCCceEEEEeecCCC
Q 014755 151 TRRDC--KDYINLLSCHTWEIMGV--FAVDTLDLADIEWSPDDSAIVIWDSPL----EYKVLIYSPDGRCLLKYQAYESG 222 (419)
Q Consensus 151 ~~~~~--~g~v~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~~~~ 222 (419)
+.+.. ...+.+||+.+.+-... +.........+.+ +++.+++ .+.. -..+.+||+....-..+......
T Consensus 176 G~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~-GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 252 (308)
T 1zgk_A 176 GFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAA-GGYDGQDQLNSVERYDVETETWTFVAPMKHR 252 (308)
T ss_dssp CBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEE-CCBCSSSBCCCEEEEETTTTEEEECCCCSSC
T ss_pred CCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEE-eCCCCCCccceEEEEeCCCCcEEECCCCCCC
Confidence 65421 24689999987554322 2111111222222 4444444 2222 25689999944443333322211
Q ss_pred CceeEEEEccCCCeEEEEEec-----CcEEEEEcCCce
Q 014755 223 LGVKSISWSPCGQFLAVGSYD-----QTLRVLNHLTWK 255 (419)
Q Consensus 223 ~~v~~~~~s~~~~~l~~~~~d-----~~i~v~d~~~~~ 255 (419)
..-.+++. -++++++.|+.+ ..+.+||+.+.+
T Consensus 253 r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 253 RSALGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp CBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred ccceEEEE-ECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 11122222 266777777754 357888887643
No 322
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.83 E-value=0.0046 Score=55.05 Aligned_cols=231 Identities=13% Similarity=0.070 Sum_probs=139.0
Q ss_pred CEEEEEe---CCeEEEEecCCCcEEEEeec--------------------------CcceeEEEEec-----CCCeEEEE
Q 014755 20 RYIAVAV---DYRLVVRDAHSFKVVQLFSC--------------------------LDKISYIEWAL-----DSEYILCG 65 (419)
Q Consensus 20 ~~la~~~---~~~i~i~~~~~~~~~~~~~~--------------------------~~~v~~~~~s~-----~~~~l~~~ 65 (419)
.|..+.| .|.|+|+-+.+++.++.+.- .+..+...+|. ||++|+.-
T Consensus 69 eyy~f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiN 148 (638)
T 3sbq_A 69 DYYGFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFIN 148 (638)
T ss_dssp SEEEEEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEE
T ss_pred cEEEEeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEe
Confidence 3444444 57799999999988876531 01222333332 78899988
Q ss_pred eccCCeEEEEEccCCcceeeee-cCCccEeEEEEC--CCCCEEEEEecC-------CCeE--------EE---EEcCCCe
Q 014755 66 LYKRLMIQAWSLTQPEWTCKID-EGLAGIAYARWS--PDSRHILTTSDF-------QLRL--------TV---WSLLNTA 124 (419)
Q Consensus 66 ~~~~g~i~iw~~~~~~~~~~~~-~~~~~v~~~~~~--~~~~~l~~~~~~-------~~~i--------~i---wd~~~~~ 124 (419)
...+..|...+++..++-..+. .....+..++|- |+..+++..++. +..+ .+ .|..+.+
T Consensus 149 dkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~ 228 (638)
T 3sbq_A 149 DKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETME 228 (638)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCS
T ss_pred cCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccE
Confidence 7666788888998887655543 334568888886 788888887743 1111 11 1222222
Q ss_pred EEEeccCCCCeeeEEEccCCCEEEEEeecCCC-----------------------------------C--eEEEEeccC-
Q 014755 125 CVHVQSPKHASKGVAFTQDGKFAAICTRRDCK-----------------------------------D--YINLLSCHT- 166 (419)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----------------------------------g--~v~i~d~~~- 166 (419)
.............+...+++.+.++.+.+... + .|.+.|.+.
T Consensus 229 v~~Qv~v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~~~ 308 (638)
T 3sbq_A 229 MAFQVIVDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGRKK 308 (638)
T ss_dssp EEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSCB
T ss_pred EEEEEEcCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEccccc
Confidence 22100112233456667888888887765110 1 244555443
Q ss_pred ---CeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCC-------Cce-------EEEEeecCCCCceeEEE
Q 014755 167 ---WEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPD-------GRC-------LLKYQAYESGLGVKSIS 229 (419)
Q Consensus 167 ---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~-------~~~-------~~~~~~~~~~~~v~~~~ 229 (419)
+..+..+-.-......+..+|||+++++. +..+.++.++|.+ ++. ....+ -.......+
T Consensus 309 ~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~-GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e---~GlGPlHt~ 384 (638)
T 3sbq_A 309 DGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAA-GKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE---LGLGPLHTT 384 (638)
T ss_dssp TTBCCSSEEEEEESSSCCCEEECTTSCEEEEE-CTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB---CCSCEEEEE
T ss_pred cccCCceEEEEeCCCCCcceeeCCCCCEEEEc-CCCCCeEEEEEeehhhhhhhccccCcccceEeecc---CCCcccEEE
Confidence 22222222233456788999999999885 4557889998873 221 11122 223678899
Q ss_pred EccCCCeEEEEEecCcEEEEEcCCc
Q 014755 230 WSPCGQFLAVGSYDQTLRVLNHLTW 254 (419)
Q Consensus 230 ~s~~~~~l~~~~~d~~i~v~d~~~~ 254 (419)
|+++|.-..+.--|..|.-|++...
T Consensus 385 Fd~~G~aYTtlfidSqvvkWni~~a 409 (638)
T 3sbq_A 385 FDGRGNAYTTLFIDSQVVKWNMEEA 409 (638)
T ss_dssp ECSSSEEEEEETTTTEEEEEEHHHH
T ss_pred ECCCCceEeeeeecceEEEEeccHH
Confidence 9999955555557899999998653
No 323
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.77 E-value=0.013 Score=49.20 Aligned_cols=189 Identities=11% Similarity=0.010 Sum_probs=95.0
Q ss_pred CeEEEEecc-CCeEEEEEccCCcceeeee--cCCccEeEEEECCCCCEEEEEecC---CCeEEEEEcCCCeEEEeccCCC
Q 014755 60 EYILCGLYK-RLMIQAWSLTQPEWTCKID--EGLAGIAYARWSPDSRHILTTSDF---QLRLTVWSLLNTACVHVQSPKH 133 (419)
Q Consensus 60 ~~l~~~~~~-~g~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~---~~~i~iwd~~~~~~~~~~~~~~ 133 (419)
..++.|+.+ ...+.+||..+.+....-. ........+. -+++.++.++.+ -..+.+||+.+++...+.....
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~ 90 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT 90 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence 344555532 2478999998876543211 1111112222 356666666643 1278999999988776433222
Q ss_pred C-eeeEEEccCCCEEEEEeecC---CCCeEEEEeccCCeEEEE--EeccccceeeeeECCCCCeEEEEcCCC--------
Q 014755 134 A-SKGVAFTQDGKFAAICTRRD---CKDYINLLSCHTWEIMGV--FAVDTLDLADIEWSPDDSAIVIWDSPL-------- 199 (419)
Q Consensus 134 ~-~~~~~~~~~~~~l~~~~~~~---~~g~v~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~~~-------- 199 (419)
+ ....+..-+++.++.|+.+. ....+.+||+.+.+-... +.........+.+ +++.+++ .+..
T Consensus 91 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~-GG~~~~~~~~~~ 167 (306)
T 3ii7_A 91 PRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVC-GGSLGNNVSGRV 167 (306)
T ss_dssp CCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEE-CCEESCTTTCEE
T ss_pred cccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEE-CCCCCCCCcccc
Confidence 2 22222233666777776541 124689999987654332 2111111122222 4444444 2211
Q ss_pred CceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEec-----CcEEEEEcCCc
Q 014755 200 EYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYD-----QTLRVLNHLTW 254 (419)
Q Consensus 200 ~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----~~i~v~d~~~~ 254 (419)
-..+.+||+....-..+........-.+++.. ++++++.|+.+ ..+.+||+.+.
T Consensus 168 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~ 226 (306)
T 3ii7_A 168 LNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLN 226 (306)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTT
T ss_pred cceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCC
Confidence 35688999944444444322221111222222 66677777654 35677776653
No 324
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.74 E-value=0.014 Score=49.20 Aligned_cols=192 Identities=10% Similarity=0.008 Sum_probs=94.7
Q ss_pred CCCeEEEEecc---CCeEEEEEccCCcceeeeecCCcc-EeEEEECCCCCEEEEEec----CC----CeEEEEEcCCCeE
Q 014755 58 DSEYILCGLYK---RLMIQAWSLTQPEWTCKIDEGLAG-IAYARWSPDSRHILTTSD----FQ----LRLTVWSLLNTAC 125 (419)
Q Consensus 58 ~~~~l~~~~~~---~g~i~iw~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~----~~----~~i~iwd~~~~~~ 125 (419)
++..++.|+.+ -..+.+||..+.+....-...... -.+++. .+++.++.++. ++ ..+.+||+.+.+.
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W 102 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW 102 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCCCeE
Confidence 45666666631 136889998887654321111111 112222 25666666654 21 2588999999887
Q ss_pred EEeccCCCC-eeeEEEccCCCEEEEEeecCC--CCeEEEEeccCCeEEEE--EeccccceeeeeECCCCCeEEEEcCCC-
Q 014755 126 VHVQSPKHA-SKGVAFTQDGKFAAICTRRDC--KDYINLLSCHTWEIMGV--FAVDTLDLADIEWSPDDSAIVIWDSPL- 199 (419)
Q Consensus 126 ~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~--~g~v~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~~~- 199 (419)
..+.....+ ....+..-+++.++.|+.+.. ...+.+||+.+.+-... +.........+.+ +++.+++ .+..
T Consensus 103 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~-GG~~~ 179 (308)
T 1zgk_A 103 SPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAV-GGFDG 179 (308)
T ss_dssp EECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEE-CCBCS
T ss_pred eECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEE-eCCCC
Confidence 764322221 111222236677777664421 13688999987554332 2211112222222 4444444 2221
Q ss_pred ---CceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEec-----CcEEEEEcCCc
Q 014755 200 ---EYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYD-----QTLRVLNHLTW 254 (419)
Q Consensus 200 ---~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----~~i~v~d~~~~ 254 (419)
...+..||+....-..+........-.+++.. ++++++.|+.+ ..+.+||+.+.
T Consensus 180 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 180 TNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCC
Confidence 25688999844433333221111111222222 66677777654 35777777654
No 325
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.73 E-value=0.0061 Score=52.58 Aligned_cols=242 Identities=11% Similarity=-0.006 Sum_probs=116.6
Q ss_pred EcCCCCEEEEEe--CCeEEEEecCC--CcEEEEeecC--cceeEEEEecCCCeEEEEec-c--------CCeEEEEEccC
Q 014755 15 FSPNARYIAVAV--DYRLVVRDAHS--FKVVQLFSCL--DKISYIEWALDSEYILCGLY-K--------RLMIQAWSLTQ 79 (419)
Q Consensus 15 ~s~d~~~la~~~--~~~i~i~~~~~--~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~-~--------~g~i~iw~~~~ 79 (419)
..-++++++.|+ ...+.+||..+ .+......-. ......+..-+++.++.|+. + -..+.+||+.+
T Consensus 16 ~~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~ 95 (357)
T 2uvk_A 16 AIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKT 95 (357)
T ss_dssp EEETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTT
T ss_pred EEECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCC
Confidence 333777777775 45699999874 4443322211 11112222236777777765 2 13688999988
Q ss_pred CcceeeeecC-CccEeEEEECCCCCEEEEEecCC--------------------------------------CeEEEEEc
Q 014755 80 PEWTCKIDEG-LAGIAYARWSPDSRHILTTSDFQ--------------------------------------LRLTVWSL 120 (419)
Q Consensus 80 ~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~~--------------------------------------~~i~iwd~ 120 (419)
.++...-... .......+...+++.++.++.+. ..+.+||.
T Consensus 96 ~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~ 175 (357)
T 2uvk_A 96 NSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDP 175 (357)
T ss_dssp TEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEET
T ss_pred CcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeC
Confidence 7654332111 11111111225677777776431 37999999
Q ss_pred CCCeEEEeccCCC--Ce-eeEEEccCCCEEEEEeecCC---CCeEEEEec--cCCe--EEEEEeccccceeeeeECCCCC
Q 014755 121 LNTACVHVQSPKH--AS-KGVAFTQDGKFAAICTRRDC---KDYINLLSC--HTWE--IMGVFAVDTLDLADIEWSPDDS 190 (419)
Q Consensus 121 ~~~~~~~~~~~~~--~~-~~~~~~~~~~~l~~~~~~~~---~g~v~i~d~--~~~~--~~~~~~~~~~~v~~~~~~~~~~ 190 (419)
.+.+...+..... .. .+++. -+++.+++|+.+.. ...+..||+ .+.+ .+..+..........+...+++
T Consensus 176 ~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~ 254 (357)
T 2uvk_A 176 STQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDS 254 (357)
T ss_dssp TTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTE
T ss_pred CCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCE
Confidence 9987776432221 11 22222 35666666654311 135777876 4332 2222211111111111222444
Q ss_pred eEEEEcCCC-C--------------------ceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEecC-----
Q 014755 191 AIVIWDSPL-E--------------------YKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQ----- 244 (419)
Q Consensus 191 ~l~~~~~~~-~--------------------~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~----- 244 (419)
.+++ .+.. + ..+.+||+....-..+...... .....+..-+++.++.|+.++
T Consensus 255 iyv~-GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-r~~~~~~~~~~~i~v~GG~~~~~~~~ 332 (357)
T 2uvk_A 255 LIFA-GGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQG-RAYGVSLPWNNSLLIIGGETAGGKAV 332 (357)
T ss_dssp EEEE-CCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSC-CBSSEEEEETTEEEEEEEECGGGCEE
T ss_pred EEEE-cCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCC-cccceeEEeCCEEEEEeeeCCCCCEe
Confidence 4444 2211 0 3578899833322333222111 111222334778888888653
Q ss_pred -cEEEEEcCCceeeee
Q 014755 245 -TLRVLNHLTWKTFAE 259 (419)
Q Consensus 245 -~i~v~d~~~~~~~~~ 259 (419)
.|.++++++++.+..
T Consensus 333 ~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 333 TDSVLITVKDNKVTVQ 348 (357)
T ss_dssp EEEEEEEC-CCSCEEE
T ss_pred eeEEEEEEcCcEeEee
Confidence 366667777665443
No 326
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.63 E-value=0.005 Score=53.11 Aligned_cols=146 Identities=11% Similarity=0.033 Sum_probs=95.9
Q ss_pred eEEcCCCCEEEEEeCCeEEEEecCCCcEEEEeecC-----cceeEEEEecCCCeEEEEeccCCeEEEEEccCCcc-----
Q 014755 13 SCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFSCL-----DKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEW----- 82 (419)
Q Consensus 13 ~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~~~-----~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~----- 82 (419)
.....+|..|+++.++.|+.-++......+.+... +.|..+..+|+|++||..+. ..|.|..+..+..
T Consensus 26 ~~~~~n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~--~~V~Vv~LP~~~~~~~~~ 103 (452)
T 3pbp_A 26 IFSSQNGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND--NEIFVMEVPWGYSNVEDV 103 (452)
T ss_dssp EEEETTTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS--SEEEEEECCTTCSCCCCH
T ss_pred EEEEcCCCEEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC--CeEEEEEecCccccCccc
Confidence 34566788888888888888887744434444322 36888999999999999974 4899999873321
Q ss_pred -------eeeeec------CCccEeEEEECCC---CCEEEEEecCCCeEEEEEcCCC--eEEEec---------cCCCCe
Q 014755 83 -------TCKIDE------GLAGIAYARWSPD---SRHILTTSDFQLRLTVWSLLNT--ACVHVQ---------SPKHAS 135 (419)
Q Consensus 83 -------~~~~~~------~~~~v~~~~~~~~---~~~l~~~~~~~~~i~iwd~~~~--~~~~~~---------~~~~~~ 135 (419)
.+.+.- ...+|..+.|+|- +..|++-..|+ .|++||+... ++..+. .....+
T Consensus 104 ~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~-~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev 182 (452)
T 3pbp_A 104 SIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDD-TITMFDILNSQEKPIVLNKPNNSFGLDARVNDI 182 (452)
T ss_dssp HHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTS-CEEEEETTCTTSCCEEESCCCSEEESCSSCCCE
T ss_pred ccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCC-EEEEEEcccCCCCCcchhccccccCCCcccceE
Confidence 111211 2467999999994 56788888887 9999999852 122111 112456
Q ss_pred eeEEEccCCCEEEEEeecCCCCeEEEE
Q 014755 136 KGVAFTQDGKFAAICTRRDCKDYINLL 162 (419)
Q Consensus 136 ~~~~~~~~~~~l~~~~~~~~~g~v~i~ 162 (419)
.+++|.+++-.|.+..... .|.|+-.
T Consensus 183 ~S~~Fg~~~lTLYvl~~t~-~GDIYAl 208 (452)
T 3pbp_A 183 TDLEFSKDGLTLYCLNTTE-GGDIFAF 208 (452)
T ss_dssp EEEEECTTSSCEEEEECTT-SCEEEEE
T ss_pred EEEEEcCCCcEEEEEecCC-CCCEEEE
Confidence 7888988776666644211 1556543
No 327
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.62 E-value=0.026 Score=48.49 Aligned_cols=144 Identities=8% Similarity=0.003 Sum_probs=78.6
Q ss_pred ccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-ec-------cCCCCeeeEEEccC---CCEEEEEeec-CC---
Q 014755 91 AGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQ-------SPKHASKGVAFTQD---GKFAAICTRR-DC--- 155 (419)
Q Consensus 91 ~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~-------~~~~~~~~~~~~~~---~~~l~~~~~~-~~--- 155 (419)
.....|+|.|+|+.|+++...+ .|++++.. +.... +. ........++++|+ +..|.+.... ..
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G-~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGG-ELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTT-EEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CCcEEEEEcCCCCEEEEEeCCc-eEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 4568999999998444455555 89999854 33221 11 11234588999996 5555554321 10
Q ss_pred -CCeEEEEeccCC--e--EEEE-Eec------cccceeeeeECCCCCeEEEEcCCC------------CceEEEEcCCCc
Q 014755 156 -KDYINLLSCHTW--E--IMGV-FAV------DTLDLADIEWSPDDSAIVIWDSPL------------EYKVLIYSPDGR 211 (419)
Q Consensus 156 -~g~v~i~d~~~~--~--~~~~-~~~------~~~~v~~~~~~~~~~~l~~~~~~~------------~~~i~~~d~~~~ 211 (419)
...|..+++... + ..+. +.. .......++|.|||.+++. .+.. .++|..++.+++
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~-~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIA-LGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEE-ECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEE-ECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 125666766432 1 1111 111 1122467999999954443 2221 257888887654
Q ss_pred e-------------EEEEeecCCCCceeEEEEcc-CCCeEEE
Q 014755 212 C-------------LLKYQAYESGLGVKSISWSP-CGQFLAV 239 (419)
Q Consensus 212 ~-------------~~~~~~~~~~~~v~~~~~s~-~~~~l~~ 239 (419)
. ...+.. .. .....++|+| +|++.++
T Consensus 175 ~p~~npf~~~~~~~~~i~a~-G~-rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 175 IPDDNPFIKESGVRAEIWSY-GI-RNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp CCTTCTTTTSTTSCTTEEEE-CC-SEEEEEEEETTTTEEEEE
T ss_pred CCCCCCCcCCCCCCccEEEE-cC-cCccceEEECCCCCEEEE
Confidence 1 112211 11 1478899999 5554443
No 328
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.61 E-value=0.024 Score=47.88 Aligned_cols=227 Identities=10% Similarity=0.016 Sum_probs=115.9
Q ss_pred EEEEeCCeEEEEecCCCcEEEEeec---CcceeEEEEecCCCeEEEEecc------C----CeEEEEEccCCcceeeeec
Q 014755 22 IAVAVDYRLVVRDAHSFKVVQLFSC---LDKISYIEWALDSEYILCGLYK------R----LMIQAWSLTQPEWTCKIDE 88 (419)
Q Consensus 22 la~~~~~~i~i~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~~~------~----g~i~iw~~~~~~~~~~~~~ 88 (419)
|+.-+...+.+||..+++... ... ...........+++.++.|+.. . ..+.+||+.+.+... +..
T Consensus 7 l~~~GG~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~~~ 84 (315)
T 4asc_A 7 IFMISEEGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG-MPP 84 (315)
T ss_dssp EEEEETTEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE-CCC
T ss_pred EEEEcCCceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE-CCC
Confidence 333334679999999887544 221 1223333444577888888731 0 137788988876532 221
Q ss_pred CCcc-E-eEEEECCCCCEEEEEecC-------CCeEEEEEcCCCeEEEeccCCCC-eeeEEEccCCCEEEEEeecCC---
Q 014755 89 GLAG-I-AYARWSPDSRHILTTSDF-------QLRLTVWSLLNTACVHVQSPKHA-SKGVAFTQDGKFAAICTRRDC--- 155 (419)
Q Consensus 89 ~~~~-v-~~~~~~~~~~~l~~~~~~-------~~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~--- 155 (419)
...+ . .+++. -+++.++.++.+ ...+.+||..+++...+...+.+ ....+..-+++.++.|+.+..
T Consensus 85 ~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 163 (315)
T 4asc_A 85 LPSPRCLFGLGE-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKC 163 (315)
T ss_dssp BSSCEESCEEEE-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCB
T ss_pred CCcchhceeEEE-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcc
Confidence 1111 1 11222 256666666632 12689999999887764332222 222223346667777765211
Q ss_pred CCeEEEEeccCCeEEEE--EeccccceeeeeECCCCCeEEEEcCCCC----ceEEEEcCCCceEEEEeecCCCCceeEEE
Q 014755 156 KDYINLLSCHTWEIMGV--FAVDTLDLADIEWSPDDSAIVIWDSPLE----YKVLIYSPDGRCLLKYQAYESGLGVKSIS 229 (419)
Q Consensus 156 ~g~v~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~~~~----~~i~~~d~~~~~~~~~~~~~~~~~v~~~~ 229 (419)
...+.+||+.+.+-... +.........+.+ +++.+++ .+..+ ..+.+||+....-..+........-.+++
T Consensus 164 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~-GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~ 240 (315)
T 4asc_A 164 LNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVA-AGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLV 240 (315)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEE-EEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEE
T ss_pred cceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEE-eccCCCCccceEEEEECCCCeEEECCCCCCcccceeEE
Confidence 23689999987543322 2111111222222 4444444 22211 36888998444444443222211112222
Q ss_pred EccCCCeEEEEEecC--------------cEEEEEcCCce
Q 014755 230 WSPCGQFLAVGSYDQ--------------TLRVLNHLTWK 255 (419)
Q Consensus 230 ~s~~~~~l~~~~~d~--------------~i~v~d~~~~~ 255 (419)
. -++++++.|+.++ .+.+||+.+.+
T Consensus 241 ~-~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 241 S-LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp E-ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred E-ECCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 2 2667777777642 36778876643
No 329
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.59 E-value=0.0074 Score=60.18 Aligned_cols=270 Identities=8% Similarity=0.027 Sum_probs=149.9
Q ss_pred CeEEEEEccCCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccCCCCeeeEEEccCCCEEEE
Q 014755 70 LMIQAWSLTQPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSPKHASKGVAFTQDGKFAAI 149 (419)
Q Consensus 70 g~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 149 (419)
..|.|.|+.++..+.+-. - .--+.-.+|..+.++.-. +.++.++|+++.+.+.......+|.--.|-.+. .|+.
T Consensus 48 ~~vvIidl~~~~~~~rrp-i--~AdsAIMnP~~~iiALra--g~~lQiFnl~~k~klks~~~~e~VvfWkWis~~-~l~l 121 (1630)
T 1xi4_A 48 AQVVIIDMNDPSNPIRRP-I--SADSAIMNPASKVIALKA--GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN-TVAL 121 (1630)
T ss_pred ceEEEEECCCCCCccccc-c--cchhhccCCCcceEEEec--CCeEEEeehHHhhhhcccccCCCceEEEecCCC-eeEE
Confidence 479999998876442211 1 112233577777666654 338999999998777633344556566665443 4555
Q ss_pred EeecCCCCeEEEEeccC-CeEEEEEecc----ccceeeeeECCCCCeEEEEcCC-----CCceEEEEcCCCceEEEEeec
Q 014755 150 CTRRDCKDYINLLSCHT-WEIMGVFAVD----TLDLADIEWSPDDSAIVIWDSP-----LEYKVLIYSPDGRCLLKYQAY 219 (419)
Q Consensus 150 ~~~~~~~g~v~i~d~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~~-----~~~~i~~~d~~~~~~~~~~~~ 219 (419)
.+. ..|+-|++.. ..+.+.+..| ...|.....+++.+++++...+ ..|.+.+|+.+.+..+.+.+|
T Consensus 122 VT~----~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegh 197 (1630)
T 1xi4_A 122 VTD----NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGH 197 (1630)
T ss_pred EcC----CeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHh
Confidence 554 3899999964 3344444433 4567888889999998864332 348899999866666666665
Q ss_pred CCCCceeEEEEc--c-CCCeEEEEEe---cCcEEEEEcCCc-eeeeeecccccccCCCccceeccCCCcccccceeeecc
Q 014755 220 ESGLGVKSISWS--P-CGQFLAVGSY---DQTLRVLNHLTW-KTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLN 292 (419)
Q Consensus 220 ~~~~~v~~~~~s--~-~~~~l~~~~~---d~~i~v~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (419)
.. ....+... + ..+.++.+.. .+.++|.++... ..-..+... . ..+.|.+
T Consensus 198 a~--~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk-~-----~~~~~~~--------------- 254 (1630)
T 1xi4_A 198 AA--SFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKK-A-----VDVFFPP--------------- 254 (1630)
T ss_pred Hh--hhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccc-c-----ccccCCc---------------
Confidence 43 11112211 1 1123333322 256777776432 000111000 0 0011111
Q ss_pred CccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceee
Q 014755 293 DDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAI 372 (419)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~ 372 (419)
....+.-.++..|+.-..+...+.- |.|++||+.++.++..
T Consensus 255 -------------------------------------~~~~Dfpv~~~vs~k~g~iy~itk~--G~~~~~d~~t~~~i~~ 295 (1630)
T 1xi4_A 255 -------------------------------------EAQNDFPVAMQISEKHDVVFLITKY--GYIHLYDLETGTCIYM 295 (1630)
T ss_pred -------------------------------------ccccCcceEEEeccccCEEEEEecC--ceEEEEecccchhhhh
Confidence 0112223567778877777777776 9999999999987754
Q ss_pred cc-cCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEE
Q 014755 373 LV-QKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCV 411 (419)
Q Consensus 373 ~~-~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~ 411 (419)
-. ...+|...+-+....=++.....|.|.--.++...++
T Consensus 296 ~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~iv 335 (1630)
T 1xi4_A 296 NRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENII 335 (1630)
T ss_pred ccccCCceEEeccCCCCCceEEEcCCceEEEEEEccchhh
Confidence 43 3334444343333223444446666666665554444
No 330
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.56 E-value=0.011 Score=50.88 Aligned_cols=70 Identities=4% Similarity=-0.053 Sum_probs=40.1
Q ss_pred CCCEEEEEecCCCeEEEEEcCC--CeEEEeccCC--CCeeeEEEccCCCEEEEEee-c--C----CCCeEEEEeccCCeE
Q 014755 101 DSRHILTTSDFQLRLTVWSLLN--TACVHVQSPK--HASKGVAFTQDGKFAAICTR-R--D----CKDYINLLSCHTWEI 169 (419)
Q Consensus 101 ~~~~l~~~~~~~~~i~iwd~~~--~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~-~--~----~~g~v~i~d~~~~~~ 169 (419)
+++.++.++.++..+.++|+.. .+...+.... ......+..-+++.++.|+. + . ....+.+||+.+.+-
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W 98 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSW 98 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcE
Confidence 6666677765555899999974 5555533322 12222222235667777765 2 0 124689999987554
Q ss_pred E
Q 014755 170 M 170 (419)
Q Consensus 170 ~ 170 (419)
.
T Consensus 99 ~ 99 (357)
T 2uvk_A 99 V 99 (357)
T ss_dssp E
T ss_pred E
Confidence 3
No 331
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.55 E-value=0.0058 Score=60.89 Aligned_cols=236 Identities=9% Similarity=0.081 Sum_probs=143.2
Q ss_pred eEEcCCCCEEEEEeCCeEEEEecCCCcEEEEeecCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCc-ceeeeecC--
Q 014755 13 SCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFSCLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPE-WTCKIDEG-- 89 (419)
Q Consensus 13 ~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~-~~~~~~~~-- 89 (419)
.-.+|..+.||.-...++.|+|+++.+.++.+....+|.-=.|-.+. .|+..+ + ..|+-|++.... +...+..|
T Consensus 71 AIMnP~~~iiALrag~~lQiFnl~~k~klks~~~~e~VvfWkWis~~-~l~lVT-~-~aVyHW~~~~~s~P~k~fdR~~~ 147 (1630)
T 1xi4_A 71 AIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLN-TVALVT-D-NAVYHWSMEGESQPVKMFDRHSS 147 (1630)
T ss_pred hccCCCcceEEEecCCeEEEeehHHhhhhcccccCCCceEEEecCCC-eeEEEc-C-CeEEEeccCCCCccHHHHhcchh
Confidence 45788899999888888999999998888877777788888887554 455444 3 489999997543 22223333
Q ss_pred --CccEeEEEECCCCCEEEEEec------CCCeEEEEEcCCCeEEEeccCCCCeeeEEEc---cCCCEEEEEeecCCCCe
Q 014755 90 --LAGIAYARWSPDSRHILTTSD------FQLRLTVWSLLNTACVHVQSPKHASKGVAFT---QDGKFAAICTRRDCKDY 158 (419)
Q Consensus 90 --~~~v~~~~~~~~~~~l~~~~~------~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~g~ 158 (419)
...|..-.-+++.++++..|- -.|.+.+|..+.+....+.+|...-..+... +....++.+......+.
T Consensus 148 L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~k 227 (1630)
T 1xi4_A 148 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGK 227 (1630)
T ss_pred cccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCce
Confidence 346778888999999887652 1258899998877666566655443332221 12234555544322358
Q ss_pred EEEEeccCC---eE------EEEEecc---ccceeeeeECCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCce
Q 014755 159 INLLSCHTW---EI------MGVFAVD---TLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLGV 225 (419)
Q Consensus 159 v~i~d~~~~---~~------~~~~~~~---~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~v 225 (419)
++|.++... .. +..+... ..-..++..++....+.+ .+.-|.+.+||+ +|.++..-+.... .|
T Consensus 228 Lhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~--itk~G~~~~~d~~t~~~i~~~ris~~--~i 303 (1630)
T 1xi4_A 228 LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL--ITKYGYIHLYDLETGTCIYMNRISGE--TI 303 (1630)
T ss_pred EEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEE--EecCceEEEEecccchhhhhccccCC--ce
Confidence 889888542 11 0011111 122445666666666666 566799999999 8877655443333 34
Q ss_pred eEEEEccCCCeEEEEEecCcEEEEEcCCce
Q 014755 226 KSISWSPCGQFLAVGSYDQTLRVLNHLTWK 255 (419)
Q Consensus 226 ~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~ 255 (419)
...+.++...-++.....|.|.--.+....
T Consensus 304 F~~~~~~~~~g~~~vnr~G~vl~v~v~~~~ 333 (1630)
T 1xi4_A 304 FVTAPHEATAGIIGVNRKGQVLSVCVEEEN 333 (1630)
T ss_pred EEeccCCCCCceEEEcCCceEEEEEEccch
Confidence 333333332233333455555544444433
No 332
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.53 E-value=0.031 Score=47.13 Aligned_cols=137 Identities=9% Similarity=0.003 Sum_probs=67.4
Q ss_pred eEEEEEcCCCeEEEecc--CCCCeeeEEEccCCCEEEEEeec----CCC----CeEEEEeccCCeEEEE--Eecccccee
Q 014755 114 RLTVWSLLNTACVHVQS--PKHASKGVAFTQDGKFAAICTRR----DCK----DYINLLSCHTWEIMGV--FAVDTLDLA 181 (419)
Q Consensus 114 ~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~----~~~----g~v~i~d~~~~~~~~~--~~~~~~~v~ 181 (419)
.+..||..+++...... +...........++..++.|+.. ... ..+..||..+.+-... +........
T Consensus 14 ~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 93 (315)
T 4asc_A 14 GAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFG 93 (315)
T ss_dssp EEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCE
T ss_pred ceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhcee
Confidence 79999999988755222 21233333444577788888741 111 1378899887654322 111111111
Q ss_pred eeeECCCCCeEEEEcCC-------CCceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEe-c-----CcEEE
Q 014755 182 DIEWSPDDSAIVIWDSP-------LEYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSY-D-----QTLRV 248 (419)
Q Consensus 182 ~~~~~~~~~~l~~~~~~-------~~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d-----~~i~v 248 (419)
.+.+ +++ +++..+. ....+.+||+....-..+........-.+++ .-+++.++.|+. + ..+.+
T Consensus 94 ~~~~--~~~-lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~ 169 (315)
T 4asc_A 94 LGEA--LNS-IYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVL-SHMDLVYVIGGKGSDRKCLNKMCV 169 (315)
T ss_dssp EEEE--TTE-EEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEE-EETTEEEEECCBCTTSCBCCCEEE
T ss_pred EEEE--CCE-EEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEE-EECCEEEEEeCCCCCCcccceEEE
Confidence 2222 344 4443231 1256889998443333332211111112222 245666777765 2 35677
Q ss_pred EEcCCc
Q 014755 249 LNHLTW 254 (419)
Q Consensus 249 ~d~~~~ 254 (419)
||..+.
T Consensus 170 yd~~~~ 175 (315)
T 4asc_A 170 YDPKKF 175 (315)
T ss_dssp EETTTT
T ss_pred EeCCCC
Confidence 776653
No 333
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.43 E-value=0.043 Score=46.31 Aligned_cols=229 Identities=7% Similarity=0.022 Sum_probs=114.7
Q ss_pred EEEEEeCCeEEEEecCCCcEEEEe-ec-CcceeEEEEecCCCeEEEEecc---CC-------eEEEEEccCCcceeee--
Q 014755 21 YIAVAVDYRLVVRDAHSFKVVQLF-SC-LDKISYIEWALDSEYILCGLYK---RL-------MIQAWSLTQPEWTCKI-- 86 (419)
Q Consensus 21 ~la~~~~~~i~i~~~~~~~~~~~~-~~-~~~v~~~~~s~~~~~l~~~~~~---~g-------~i~iw~~~~~~~~~~~-- 86 (419)
.|+..+...+.+||..+.+....- .. ...........++..++.|+.. ++ .+.+||..+.+....-
T Consensus 17 ~i~~~GG~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 96 (318)
T 2woz_A 17 LILLVNDTAAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPL 96 (318)
T ss_dssp EEEEECSSEEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCB
T ss_pred hhhhccccceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCC
Confidence 333334345899999988765521 11 1222333344577788888731 11 2778888877654321
Q ss_pred ecCCccEeEEEECCCCCEEEEEecC--C----CeEEEEEcCCCeEEEeccCCCCe-eeEEEccCCCEEEEEeecCC---C
Q 014755 87 DEGLAGIAYARWSPDSRHILTTSDF--Q----LRLTVWSLLNTACVHVQSPKHAS-KGVAFTQDGKFAAICTRRDC---K 156 (419)
Q Consensus 87 ~~~~~~v~~~~~~~~~~~l~~~~~~--~----~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~---~ 156 (419)
...........+ +++.++.++.+ + ..+.+||+.+.+...+...+.+. ...+...+++.++.|+.+.. .
T Consensus 97 p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 174 (318)
T 2woz_A 97 PSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCT 174 (318)
T ss_dssp SSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBC
T ss_pred CccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCcc
Confidence 111111122222 56667777643 1 25888999998877654333322 22222256677777765321 2
Q ss_pred CeEEEEeccCCeEEEE--EeccccceeeeeECCCCCeEEEEcCCC----CceEEEEcCCCceEEEEeecCCCCceeEEEE
Q 014755 157 DYINLLSCHTWEIMGV--FAVDTLDLADIEWSPDDSAIVIWDSPL----EYKVLIYSPDGRCLLKYQAYESGLGVKSISW 230 (419)
Q Consensus 157 g~v~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~ 230 (419)
..+.+||+.+.+-... +.........+.+ +++.+++ .+.. ...+.+||+....-..+........-.+++
T Consensus 175 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~-GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~- 250 (318)
T 2woz_A 175 NRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIA-GGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLV- 250 (318)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEE-EEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEE-
T ss_pred ceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEE-cCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEE-
Confidence 4699999987654332 2111111122222 4444444 2211 146788998443333332221111111222
Q ss_pred ccCCCeEEEEEec--------------CcEEEEEcCCce
Q 014755 231 SPCGQFLAVGSYD--------------QTLRVLNHLTWK 255 (419)
Q Consensus 231 s~~~~~l~~~~~d--------------~~i~v~d~~~~~ 255 (419)
.-++++++.|+.+ ..+.+||+.+.+
T Consensus 251 ~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 251 SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp EETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred EECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCE
Confidence 2356677777653 347778876643
No 334
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.36 E-value=0.073 Score=47.40 Aligned_cols=101 Identities=12% Similarity=0.108 Sum_probs=61.6
Q ss_pred ccCeEEcCCCCEEEEEeCC-eEEEEecCCCcEEEEee---------cCcceeEEEEecC---CCeEEEEecc--------
Q 014755 10 TGPSCFSPNARYIAVAVDY-RLVVRDAHSFKVVQLFS---------CLDKISYIEWALD---SEYILCGLYK-------- 68 (419)
Q Consensus 10 ~~~~~~s~d~~~la~~~~~-~i~i~~~~~~~~~~~~~---------~~~~v~~~~~s~~---~~~l~~~~~~-------- 68 (419)
...|+|.|||+++++-..+ .|++++..+++...... .......|+|+|+ +..|.+....
T Consensus 29 P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~ 108 (454)
T 1cru_A 29 PHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDK 108 (454)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--C
T ss_pred ceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCcc
Confidence 3348999999988877654 69888876665443221 2345679999996 5555544321
Q ss_pred ----CCeEEEEEccCCc-------cee-eeec-CCccEeEEEECCCCCEEEEEec
Q 014755 69 ----RLMIQAWSLTQPE-------WTC-KIDE-GLAGIAYARWSPDSRHILTTSD 110 (419)
Q Consensus 69 ----~g~i~iw~~~~~~-------~~~-~~~~-~~~~v~~~~~~~~~~~l~~~~~ 110 (419)
...|.-+++..+. .+. .+.. .......|+|.|||.+.++.+.
T Consensus 109 ~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 109 ELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp CSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred ccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 1356666654321 111 1111 1234688999999987777653
No 335
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.11 E-value=0.22 Score=47.89 Aligned_cols=311 Identities=11% Similarity=0.020 Sum_probs=175.8
Q ss_pred EEcCCCCEEEEEeCCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeee-----
Q 014755 14 CFSPNARYIAVAVDYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKID----- 87 (419)
Q Consensus 14 ~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~----- 87 (419)
...++| .|-.+.++.+..||..+.+...... ....|.++.. .+| .|..++.+ -+..++..+++.. .+.
T Consensus 69 ~~d~~g-~lWigT~~Gl~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~--Gl~~~~~~~~~~~-~~~~~~~~ 142 (758)
T 3ott_A 69 VIIDNT-YLYMGTDNGILVYNYRADRYEQPETDFPTDVRTMAL-QGD-TLWLGALN--GLYTYQLQSRKLT-SFDTRRNG 142 (758)
T ss_dssp EEETTT-EEEEEETTEEEEEETTTTEECCCSCCCCSCEEEEEE-ETT-EEEEEETT--EEEEEETTTCCEE-EECHHHHC
T ss_pred EEcCCC-cEEEEeCCCeEEEeCCCCEEECcccCCCceEEEEEe-cCC-cEEEEcCC--cceeEeCCCCeEE-EeccCCCC
Confidence 334444 5666666678899988765432111 1234776654 355 45555533 5888898766543 221
Q ss_pred cCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEeccC------CCCeeeEEEccCCCEEEEEeecCCCCeEEE
Q 014755 88 EGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQSP------KHASKGVAFTQDGKFAAICTRRDCKDYINL 161 (419)
Q Consensus 88 ~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i 161 (419)
.....|.++....++...+ +.. + -+..++..+++...+... ...+.++...+++..|.+++. +-+..
T Consensus 143 l~~~~i~~i~~d~~g~lWi-gt~-~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~----~Gl~~ 215 (758)
T 3ott_A 143 LPNNTIYSIIRTKDNQIYV-GTY-N-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE----GYLFQ 215 (758)
T ss_dssp CSCSCEEEEEECTTCCEEE-EET-T-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE----EEEEE
T ss_pred cCCCeEEEEEEcCCCCEEE-EeC-C-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC----CCCeE
Confidence 1234588888887777555 443 3 488889888765543221 123677777777776666664 35888
Q ss_pred EeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecC------CCCceeEEEEccCCC
Q 014755 162 LSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYE------SGLGVKSISWSPCGQ 235 (419)
Q Consensus 162 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~------~~~~v~~~~~s~~~~ 235 (419)
+|..+++...........|.++...++|...+. + ++.+.+++.....+..+.... ....|.++..+.+|.
T Consensus 216 ~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig---T-~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~ 291 (758)
T 3ott_A 216 YFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAG---T-DNGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHN 291 (758)
T ss_dssp EETTTTEEEEEEEEEEEEEEEEEECTTCCEEEE---E-TTEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCC
T ss_pred EcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEE---e-CCceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCC
Confidence 998876543322223456888888888876654 2 346888988443344443211 112588888877775
Q ss_pred eEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCceEEEEEecc
Q 014755 236 FLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVME 315 (419)
Q Consensus 236 ~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (419)
+ -.|+..| +.++.... ....+......
T Consensus 292 l-WiGT~~G-l~~~~~~~--~~~~~~~~~~~------------------------------------------------- 318 (758)
T 3ott_A 292 I-WLGTDYG-ISLSRYNS--ALQFIPISQIT------------------------------------------------- 318 (758)
T ss_dssp E-EEEESSS-EEEECCCC---CEEEEHHHHS-------------------------------------------------
T ss_pred E-EEEeCCc-ccccccCC--ceeEEecccCC-------------------------------------------------
Confidence 4 4455555 54433211 11111000000
Q ss_pred CCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCc--eeecc--------cCCCeeEEEeC
Q 014755 316 IPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEP--AAILV--------QKDPIRAATWD 385 (419)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~--~~~~~--------~~~~v~~~~~s 385 (419)
.......|.++.-..+|.+.+.. .+ | +..++..+++. ...+. ....|.++.-.
T Consensus 319 -------------~~~~~~~v~~i~~D~~g~lWiGt-~~--G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d 381 (758)
T 3ott_A 319 -------------GTGDGNQFYSLFRDSKGFYWFGG-AN--G-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYED 381 (758)
T ss_dssp -------------CSCCCCBEEEEEECTTCCEEEEE-TT--E-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEEC
T ss_pred -------------CCCCCceEEEEEEcCCCCEEEee-CC--c-ceeecccccccceeEEeccCCcCCCCCCCceEEEEEC
Confidence 00012347888888888766554 43 5 55666554321 11111 12458888888
Q ss_pred CCCCeEEEEeCCCcEEEeecCCCeEEec
Q 014755 386 PTCTRLVLCTGSSHLYMWTPSGAYCVSN 413 (419)
Q Consensus 386 ~~~~~l~s~~~dg~i~vw~~~~~~~~~~ 413 (419)
.+|++.+ |+ ++-+..|+..+++....
T Consensus 382 ~~g~lWi-gt-~~GL~~~~~~~~~~~~~ 407 (758)
T 3ott_A 382 KEQQLWI-AT-DGSINRYDYATRQFIHY 407 (758)
T ss_dssp TTSCEEE-EE-TTEEEEEETTTTEEEEE
T ss_pred CCCCEEE-Ee-CCcHhhcCcCCCcEEEe
Confidence 8887554 44 45799999988776543
No 336
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.10 E-value=0.11 Score=44.24 Aligned_cols=152 Identities=16% Similarity=0.165 Sum_probs=85.3
Q ss_pred eeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEEec-------cCCCCeeeEEEccC---CCEEEEEeecC
Q 014755 85 KIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVHVQ-------SPKHASKGVAFTQD---GKFAAICTRRD 154 (419)
Q Consensus 85 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~~~-------~~~~~~~~~~~~~~---~~~l~~~~~~~ 154 (419)
.+...-.....|+|.|||..+++-...+ .|++++..+++...+. ........++++|+ +..|++.....
T Consensus 26 ~va~gL~~P~~ia~~pdG~llVter~~G-~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~ 104 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGDLLVSSRDEA-TITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA 104 (347)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTC-EEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS
T ss_pred EeecCCCCceEEEEcCCCcEEEEEecCC-EEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC
Confidence 3444455678999999998665554344 8999987665543321 12345689999996 44555432211
Q ss_pred CCCeEEEEeccCC----------eEE-EEEec-cccceeeeeECCCCCeEEEEcC-----------CCCceEEEEcCCCc
Q 014755 155 CKDYINLLSCHTW----------EIM-GVFAV-DTLDLADIEWSPDDSAIVIWDS-----------PLEYKVLIYSPDGR 211 (419)
Q Consensus 155 ~~g~v~i~d~~~~----------~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~~-----------~~~~~i~~~d~~~~ 211 (419)
..+.|.-|.+..+ +.+ ..+.. .......+.|.|||.+.+.... ...+.|.-++.+++
T Consensus 105 ~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ 184 (347)
T 3das_A 105 SDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGE 184 (347)
T ss_dssp SSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSS
T ss_pred CCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCC
Confidence 1246666665441 111 11221 1234567999999976655211 12367777777654
Q ss_pred e--------EEEEeecCCCCceeEEEEccCCCeEEE
Q 014755 212 C--------LLKYQAYESGLGVKSISWSPCGQFLAV 239 (419)
Q Consensus 212 ~--------~~~~~~~~~~~~v~~~~~s~~~~~l~~ 239 (419)
. ...+. ..+. ....++|+|+|++.++
T Consensus 185 ip~~nPf~~~~i~a-~G~R-Np~Gla~dp~G~L~~~ 218 (347)
T 3das_A 185 PAPGNPFPGSPVYS-YGHR-NVQGLAWDDKQRLFAS 218 (347)
T ss_dssp BCTTCSSTTCCEEE-BCCS-BCCEEEECTTCCEEEE
T ss_pred ccCCCCCCCCeEEe-eCCC-CcceEEECCCCCEEEE
Confidence 1 11121 1111 4678999998765444
No 337
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.03 E-value=0.12 Score=43.57 Aligned_cols=137 Identities=13% Similarity=0.090 Sum_probs=66.5
Q ss_pred eEEEEEcCCCeEEEeccC--CCCeeeEEEccCCCEEEEEeec----CC----CCeEEEEeccCCeEEEE--Eecccccee
Q 014755 114 RLTVWSLLNTACVHVQSP--KHASKGVAFTQDGKFAAICTRR----DC----KDYINLLSCHTWEIMGV--FAVDTLDLA 181 (419)
Q Consensus 114 ~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~----~~----~g~v~i~d~~~~~~~~~--~~~~~~~v~ 181 (419)
.+..||..+++....... ...........++..++.|+.. .. ...+..||..+.+-... +........
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 104 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFG 104 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCE
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccc
Confidence 588999998887652211 2222333445567777777731 10 01278889877654332 111111112
Q ss_pred eeeECCCCCeEEEEcCCC------CceEEEEcCCCceEEEEeecCCCCceeEEEEccCCCeEEEEEec------CcEEEE
Q 014755 182 DIEWSPDDSAIVIWDSPL------EYKVLIYSPDGRCLLKYQAYESGLGVKSISWSPCGQFLAVGSYD------QTLRVL 249 (419)
Q Consensus 182 ~~~~~~~~~~l~~~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------~~i~v~ 249 (419)
.+.+ +++.+++ .+.. ...+.+||+....-..+........-.+++. .+++.++.|+.+ ..+.+|
T Consensus 105 ~~~~--~~~iyv~-GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~y 180 (318)
T 2woz_A 105 LGEV--DDKIYVV-AGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIY 180 (318)
T ss_dssp EEEE--TTEEEEE-EEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEE
T ss_pred eEEE--CCEEEEE-cCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEE
Confidence 2222 4444444 2221 1468889984444343332211101112222 466676777642 247777
Q ss_pred EcCCc
Q 014755 250 NHLTW 254 (419)
Q Consensus 250 d~~~~ 254 (419)
|+.+.
T Consensus 181 d~~~~ 185 (318)
T 2woz_A 181 NPKKG 185 (318)
T ss_dssp ETTTT
T ss_pred cCCCC
Confidence 77654
No 338
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.03 E-value=0.14 Score=44.36 Aligned_cols=147 Identities=14% Similarity=0.139 Sum_probs=99.6
Q ss_pred EEecCCCeEEEEeccCCeEEEEEccCCcceeeeecC----CccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCe-----
Q 014755 54 EWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDEG----LAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTA----- 124 (419)
Q Consensus 54 ~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~----- 124 (419)
..+.+|..++++- + +.||.-++......+.+... ...|..+..+|+|++|+..+.. .|.|..+..+.
T Consensus 27 ~~~~n~t~i~~a~-~-n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~--~V~Vv~LP~~~~~~~~ 102 (452)
T 3pbp_A 27 FSSQNGTRIVFIQ-D-NIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDN--EIFVMEVPWGYSNVED 102 (452)
T ss_dssp EEETTTTEEEEEE-T-TEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSS--EEEEEECCTTCSCCCC
T ss_pred EEEcCCCEEEEEE-C-CEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCC--eEEEEEecCccccCcc
Confidence 3455777777775 3 58998888754444444332 2368889999999999999764 68888887321
Q ss_pred --------EEEecc------CCCCeeeEEEccCC---CEEEEEeecCCCCeEEEEeccCC--eEEEEEe---------cc
Q 014755 125 --------CVHVQS------PKHASKGVAFTQDG---KFAAICTRRDCKDYINLLSCHTW--EIMGVFA---------VD 176 (419)
Q Consensus 125 --------~~~~~~------~~~~~~~~~~~~~~---~~l~~~~~~~~~g~v~i~d~~~~--~~~~~~~---------~~ 176 (419)
+..+.. ...+|..+.|+|-+ ..|++-..| +.|++||+... ++. .+. ..
T Consensus 103 ~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD---~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~ 178 (452)
T 3pbp_A 103 VSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKED---DTITMFDILNSQEKPI-VLNKPNNSFGLDAR 178 (452)
T ss_dssp HHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETT---SCEEEEETTCTTSCCE-EESCCCSEEESCSS
T ss_pred cccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecC---CEEEEEEcccCCCCCc-chhccccccCCCcc
Confidence 111111 24678999999965 578888776 79999999852 112 221 11
Q ss_pred ccceeeeeECCCCCeEEEEcCCCCceEEEEcC
Q 014755 177 TLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP 208 (419)
Q Consensus 177 ~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~ 208 (419)
...+.+++|.+++-.|.+.....+|.|+..-+
T Consensus 179 ~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAlcP 210 (452)
T 3pbp_A 179 VNDITDLEFSKDGLTLYCLNTTEGGDIFAFYP 210 (452)
T ss_dssp CCCEEEEEECTTSSCEEEEECTTSCEEEEESS
T ss_pred cceEEEEEEcCCCcEEEEEecCCCCCEEEECC
Confidence 25688899999887777754556788877665
No 339
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.01 E-value=0.14 Score=48.41 Aligned_cols=152 Identities=10% Similarity=-0.001 Sum_probs=89.6
Q ss_pred CCCCEEEEEeC-----CeEEEEecCCCcEEEEe-e-------cCcceeEEEEec-CCCeEEEEeccC-----CeEEEEEc
Q 014755 17 PNARYIAVAVD-----YRLVVRDAHSFKVVQLF-S-------CLDKISYIEWAL-DSEYILCGLYKR-----LMIQAWSL 77 (419)
Q Consensus 17 ~d~~~la~~~~-----~~i~i~~~~~~~~~~~~-~-------~~~~v~~~~~s~-~~~~l~~~~~~~-----g~i~iw~~ 77 (419)
.++++++.|+. +.+.+||..+++..... . ....-.+++..+ +++.++.|+.+. ..+.+||+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 56777777762 34889999888766544 2 111223444444 777777877542 25789999
Q ss_pred cCCcceeeeecCCc-cEeEEEECCCCCEEEEEecCCC-eEEEEEcCCCeEEEeccC------CCCeeeEEEccC-CCEEE
Q 014755 78 TQPEWTCKIDEGLA-GIAYARWSPDSRHILTTSDFQL-RLTVWSLLNTACVHVQSP------KHASKGVAFTQD-GKFAA 148 (419)
Q Consensus 78 ~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~~~~-~i~iwd~~~~~~~~~~~~------~~~~~~~~~~~~-~~~l~ 148 (419)
.+.++...-..... .-.+++...+++.++.|+.++. .+.+||..+.+...+... .....++.+..+ ++.++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 88765432111111 1123333347888888775432 589999999887764321 111233555555 56667
Q ss_pred EEeecCC----CCeEEEEeccCCe
Q 014755 149 ICTRRDC----KDYINLLSCHTWE 168 (419)
Q Consensus 149 ~~~~~~~----~g~v~i~d~~~~~ 168 (419)
.|+.+.. ...+.+||+.+.+
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTC
T ss_pred ECCcCCCCCeeeCcEEEEEccCCc
Confidence 7665211 2479999998765
No 340
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.94 E-value=0.21 Score=44.86 Aligned_cols=186 Identities=10% Similarity=0.004 Sum_probs=106.1
Q ss_pred EEEeccCCeEEEEEccCCcceeeeecC-------------------------CccE--eEEEECC---CCCEEEEEecCC
Q 014755 63 LCGLYKRLMIQAWSLTQPEWTCKIDEG-------------------------LAGI--AYARWSP---DSRHILTTSDFQ 112 (419)
Q Consensus 63 ~~~~~~~g~i~iw~~~~~~~~~~~~~~-------------------------~~~v--~~~~~~~---~~~~l~~~~~~~ 112 (419)
.+|+. .|.|+|+-+.+++.+..+.-. .+.. ..+.+.. ||++|+.-...+
T Consensus 74 ~SgG~-sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdkan 152 (638)
T 3sbq_A 74 WSGGH-QGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKAN 152 (638)
T ss_dssp EECGG-GCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETTT
T ss_pred eecCc-CceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCCC
Confidence 34444 489999999988776665310 0111 1333432 788898888766
Q ss_pred CeEEEEEcCCCeEEEe--ccCCCCeeeEEEc--cCCCEEEEEeecC----CCCe-E--------EE---EeccCCeEEEE
Q 014755 113 LRLTVWSLLNTACVHV--QSPKHASKGVAFT--QDGKFAAICTRRD----CKDY-I--------NL---LSCHTWEIMGV 172 (419)
Q Consensus 113 ~~i~iwd~~~~~~~~~--~~~~~~~~~~~~~--~~~~~l~~~~~~~----~~g~-v--------~i---~d~~~~~~~~~ 172 (419)
..|...+++.-++-++ ......+.++.|- |+..|++.+++.. .+|. + .+ .|..+.+...+
T Consensus 153 ~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v~~Q 232 (638)
T 3sbq_A 153 SRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEMAFQ 232 (638)
T ss_dssp TEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSEEEE
T ss_pred cceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEEEEE
Confidence 6899999998777662 2334456888886 6888888877531 1111 1 11 23333332222
Q ss_pred EeccccceeeeeECCCCCeEEEEcCCCC------------------------------------c--eEEEEcC-C----
Q 014755 173 FAVDTLDLADIEWSPDDSAIVIWDSPLE------------------------------------Y--KVLIYSP-D---- 209 (419)
Q Consensus 173 ~~~~~~~v~~~~~~~~~~~l~~~~~~~~------------------------------------~--~i~~~d~-~---- 209 (419)
+.. .+....+...+++++.+...-.++ + .+.+.|. .
T Consensus 233 v~v-~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~~~~~~ 311 (638)
T 3sbq_A 233 VIV-DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGRKKDGK 311 (638)
T ss_dssp EEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSCBTTB
T ss_pred EEc-CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEcccccccc
Confidence 211 223344555666766654222110 1 2444444 2
Q ss_pred Cc-eEEEEeecCCCCceeEEEEccCCCeEEEEEe-cCcEEEEEcCC
Q 014755 210 GR-CLLKYQAYESGLGVKSISWSPCGQFLAVGSY-DQTLRVLNHLT 253 (419)
Q Consensus 210 ~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-d~~i~v~d~~~ 253 (419)
+. ....+.... ....+.++|||++++.++. +.++.|+|++.
T Consensus 312 ~~~~~~~iP~pk---sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k 354 (638)
T 3sbq_A 312 DSKFTRYVPVPK---NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDK 354 (638)
T ss_dssp CCSSEEEEEESS---SCCCEEECTTSCEEEEECTTSSBEEEEEGGG
T ss_pred CCceEEEEeCCC---CCcceeeCCCCCEEEEcCCCCCeEEEEEeeh
Confidence 11 222222222 5778999999999888764 67899999875
No 341
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.90 E-value=0.33 Score=46.63 Aligned_cols=321 Identities=7% Similarity=-0.042 Sum_probs=175.1
Q ss_pred eEEcCCCCEEEEEeCCeEEEEecCCCcEEEEee-cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceeeeec---
Q 014755 13 SCFSPNARYIAVAVDYRLVVRDAHSFKVVQLFS-CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCKIDE--- 88 (419)
Q Consensus 13 ~~~s~d~~~la~~~~~~i~i~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~--- 88 (419)
+...+++..|-.|.++.+..+|..+++...... ....|.++...++|.+.+. + + +-+.+++..+++.......
T Consensus 196 i~~d~~~~~lWigt~~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-T-~-~Gl~~~~~~~~~~~~~~~~~~~ 272 (758)
T 3ott_A 196 LLEDTTRQCVWIGTEGYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAG-T-D-NGLYVYHNDTTPLQHIIHDSRN 272 (758)
T ss_dssp EEEETTTTEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEE-E-T-TEEEEECCTTSCCEEECCCTTC
T ss_pred EEEECCCCEEEEEECCCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEE-e-C-CceeEEecCCCcEEEEEcCCCC
Confidence 444556665555655678889988776544322 2345888888888876554 4 3 3588888776654322111
Q ss_pred ----CCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCC-eEEEec-----cCCCCeeeEEEccCCCEEEEEeecCCCCe
Q 014755 89 ----GLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNT-ACVHVQ-----SPKHASKGVAFTQDGKFAAICTRRDCKDY 158 (419)
Q Consensus 89 ----~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~g~ 158 (419)
....|.++....+|..- .+...+ +.++..... +..... .....+.++....+|...+ |+. +-
T Consensus 273 ~~~l~~~~i~~i~~D~~g~lW-iGT~~G--l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWi-Gt~----~G 344 (758)
T 3ott_A 273 IQSLTNNIIWNIFADQEHNIW-LGTDYG--ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWF-GGA----NG 344 (758)
T ss_dssp TTSCSCSCEEEEEECTTCCEE-EEESSS--EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEE-EET----TE
T ss_pred cCcCCcCeEEEEEEcCCCCEE-EEeCCc--ccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEE-eeC----Cc
Confidence 12358888887777644 444433 444432221 111111 1233567777777775544 443 24
Q ss_pred EEEEeccCCe--EEEEEec-------cccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEeecC-----CCCc
Q 014755 159 INLLSCHTWE--IMGVFAV-------DTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQAYE-----SGLG 224 (419)
Q Consensus 159 v~i~d~~~~~--~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~-----~~~~ 224 (419)
+..++..+++ ....+.. ....|.++.-.++|+..+. + ++.+..||........+.... ....
T Consensus 345 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWig---t-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (758)
T 3ott_A 345 LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWIA---T-DGSINRYDYATRQFIHYNIVDNTGTYNTNW 420 (758)
T ss_dssp EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEEE---E-TTEEEEEETTTTEEEEEEEECCC--CBSSS
T ss_pred ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEEE---e-CCcHhhcCcCCCcEEEeecCCCcCCCCCce
Confidence 6667655432 1112211 1235788887777775543 3 457999998444444443111 1125
Q ss_pred eeEEEEccCCCeEEEEEecCcEEEEEcCCceee--eeecccccccCCCccceeccCCCcccccceeeeccCccccccccc
Q 014755 225 VKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTF--AEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDA 302 (419)
Q Consensus 225 v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (419)
|.++...++|+ |..|+..+-|.++|..+.... ..+.... .|.. ..+
T Consensus 421 v~~i~~d~~g~-lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~---------~~~~---~~~------------------- 468 (758)
T 3ott_A 421 TYYIFEDTAGQ-LWISTCLGGIFVVDKHKLMQSTSGQYIAEQ---------NYSV---HNG------------------- 468 (758)
T ss_dssp EEEEEECTTSE-EEEEESSSCEEEEEHHHHHHCCSSEEECSE---------EECG---GGT-------------------
T ss_pred EEEEEEcCCCC-EEEEECCCceEEEccccccccCCcceeccc---------cccc---ccc-------------------
Confidence 77888777775 445666666888885431000 0000000 0000 000
Q ss_pred cCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeecc----cCCC
Q 014755 303 TNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAILV----QKDP 378 (419)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~~----~~~~ 378 (419)
-....|.++...++|++.+.++.. +-|..+|..+++...... ....
T Consensus 469 ----------------------------l~~~~i~~i~~d~~g~lWi~~~t~--~Gl~~~d~~~~~~~~~~~~~~~~~~~ 518 (758)
T 3ott_A 469 ----------------------------LSGMFINQIIPDNEGNVWVLLYNN--KGIDKINPRTREVTKLFADELTGEKS 518 (758)
T ss_dssp ----------------------------CSCSCEEEEEECTTSCEEEEETTC--SSEEEEETTTTEEEEECTTTSCGGGC
T ss_pred ----------------------------cccceeeeEEEcCCCCEEEEccCC--CCcEEEeCCCCceEEecCCCcCCCcc
Confidence 012247888889999877633333 458888988776555431 1346
Q ss_pred eeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEEe
Q 014755 379 IRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCVS 412 (419)
Q Consensus 379 v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~ 412 (419)
+.++....+|.+.+ ++.. -+..++..+++...
T Consensus 519 ~~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~ 550 (758)
T 3ott_A 519 PNYLLCDEDGLLWV-GFHG-GVMRINPKDESQQS 550 (758)
T ss_dssp EEEEEECTTSCEEE-EETT-EEEEECC--CCCCB
T ss_pred cceEEECCCCCEEE-EecC-ceEEEecCCCceEE
Confidence 78888888888665 4444 58888887665443
No 342
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.83 E-value=0.037 Score=43.12 Aligned_cols=132 Identities=10% Similarity=0.085 Sum_probs=76.9
Q ss_pred CeEEcCCCCEEEEEeCCeEEEEecCCCcE------EEEeec--CcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcce
Q 014755 12 PSCFSPNARYIAVAVDYRLVVRDAHSFKV------VQLFSC--LDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWT 83 (419)
Q Consensus 12 ~~~~s~d~~~la~~~~~~i~i~~~~~~~~------~~~~~~--~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~ 83 (419)
.++|+|||.+.|+ .++.+.-.+..+... -..++. -..-.++.|.|+|.+.++ .| |.|+-++..+...-
T Consensus 45 ~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~d-G~iyr~~pP~~~~~ 120 (236)
T 1tl2_A 45 FLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SK-DKLYKASPPQSDTD 120 (236)
T ss_dssp EEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ET-TEEEEESCCCSTTC
T ss_pred eEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CC-CEEEEeCCCcCCCC
Confidence 3999999998887 888877777655221 122221 112478999999988777 35 88887776332111
Q ss_pred ------eee-ecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCe-------EEEec-cCCCCeeeEEEccCCCEEE
Q 014755 84 ------CKI-DEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTA-------CVHVQ-SPKHASKGVAFTQDGKFAA 148 (419)
Q Consensus 84 ------~~~-~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~-------~~~~~-~~~~~~~~~~~~~~~~~l~ 148 (419)
..+ ...-..+..+.|.|+|...++. ++ .++-....++. ...+- ..-..-+.+.|.+++...+
T Consensus 121 ~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg-~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~ 197 (236)
T 1tl2_A 121 NWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQ-QFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFG 197 (236)
T ss_dssp CHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TT-EEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEE
T ss_pred ceeccccEeccCCCCceEEEEECCCceEEEEe--CC-cEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEE
Confidence 111 1122568999999999876666 55 54433222111 00111 1111225566788877666
Q ss_pred EE
Q 014755 149 IC 150 (419)
Q Consensus 149 ~~ 150 (419)
+.
T Consensus 198 v~ 199 (236)
T 1tl2_A 198 VQ 199 (236)
T ss_dssp EE
T ss_pred Ee
Confidence 65
No 343
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=96.82 E-value=0.35 Score=45.72 Aligned_cols=201 Identities=9% Similarity=0.045 Sum_probs=104.0
Q ss_pred eeEEE-EecCCCeEEEEeccC----CeEEEEEccCCcceee-ee-cCCc------cEeEEEECCCCCEEEEEec------
Q 014755 50 ISYIE-WALDSEYILCGLYKR----LMIQAWSLTQPEWTCK-ID-EGLA------GIAYARWSPDSRHILTTSD------ 110 (419)
Q Consensus 50 v~~~~-~s~~~~~l~~~~~~~----g~i~iw~~~~~~~~~~-~~-~~~~------~v~~~~~~~~~~~l~~~~~------ 110 (419)
...+. ++|++++++.+-++. ..++++|+.+++.+.. +. ..+. ....++|. |+..++.+..
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~-d~~~~~~~~~~~~~~~ 209 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWI-NKDTIIFNLVLHKNEI 209 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEE-ETTEEEECCCCSTTCB
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEE-CCCEEEEEeCCCCCCc
Confidence 44555 899999988765442 3899999999876532 11 0001 11344776 4444444321
Q ss_pred ----CCCeEEEEEcCCC---eEEEeccCCCCe-eeEEEccCCCE-----EEEEeecCCCCeEEEEeccC--CeEEEEEec
Q 014755 111 ----FQLRLTVWSLLNT---ACVHVQSPKHAS-KGVAFTQDGKF-----AAICTRRDCKDYINLLSCHT--WEIMGVFAV 175 (419)
Q Consensus 111 ----~~~~i~iwd~~~~---~~~~~~~~~~~~-~~~~~~~~~~~-----l~~~~~~~~~g~v~i~d~~~--~~~~~~~~~ 175 (419)
....|+.|.+-+. ..+.+......+ .....++++++ ++..+.+.....+++.+... ++.......
T Consensus 210 ~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 289 (711)
T 4hvt_A 210 TSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMP 289 (711)
T ss_dssp CTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSC
T ss_pred CcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecC
Confidence 1126888887653 222233333333 44556677663 33333222224667777653 332222221
Q ss_pred cccceeeeeECCCCCeEEEEcCC--------CCceEEEEcC-CC-------ceEEEEeecCCCCceeEEEEccCCCeEEE
Q 014755 176 DTLDLADIEWSPDDSAIVIWDSP--------LEYKVLIYSP-DG-------RCLLKYQAYESGLGVKSISWSPCGQFLAV 239 (419)
Q Consensus 176 ~~~~v~~~~~~~~~~~l~~~~~~--------~~~~i~~~d~-~~-------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 239 (419)
... .+..+.++.+++..... ..+.|...++ ++ .....+-.+.....+..+.+..+ .++++
T Consensus 290 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~ 365 (711)
T 4hvt_A 290 SDA---TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLA 365 (711)
T ss_dssp TTC---EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEE
T ss_pred Ccc---eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEE
Confidence 111 12334455555532111 3567888887 32 22333223333346788888876 46666
Q ss_pred EEecC--cEEEEEcCCce
Q 014755 240 GSYDQ--TLRVLNHLTWK 255 (419)
Q Consensus 240 ~~~d~--~i~v~d~~~~~ 255 (419)
...++ .+.++++.+++
T Consensus 366 ~~~~~~~~l~~~~~~~g~ 383 (711)
T 4hvt_A 366 TYDNVVAKVVTFTLENEQ 383 (711)
T ss_dssp EEETTEEEEEEECEETTE
T ss_pred EEECCEEEEEEEECCCCc
Confidence 66665 46677765553
No 344
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.76 E-value=0.27 Score=43.72 Aligned_cols=148 Identities=18% Similarity=0.181 Sum_probs=84.4
Q ss_pred CCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE---ecc------CCCCeeeEEEccC---CCEEEEEeec---
Q 014755 89 GLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH---VQS------PKHASKGVAFTQD---GKFAAICTRR--- 153 (419)
Q Consensus 89 ~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~---~~~------~~~~~~~~~~~~~---~~~l~~~~~~--- 153 (419)
.-.....|+|.|+|+.+++- ..++.|++++..+++... +.. .......++|+|+ +..|.++...
T Consensus 25 ~l~~P~~~a~~pdG~l~V~e-~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~ 103 (454)
T 1cru_A 25 NLNKPHALLWGPDNQIWLTE-RATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNP 103 (454)
T ss_dssp CCSSEEEEEECTTSCEEEEE-TTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECT
T ss_pred CCCCceEEEEcCCCcEEEEE-cCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEecccc
Confidence 34456899999999866654 444378888876554433 111 1344578999996 5555554421
Q ss_pred ---CC----CCeEEEEeccCC--e-----EEE-EEec-cccceeeeeECCCCCeEEEE-cCC------------------
Q 014755 154 ---DC----KDYINLLSCHTW--E-----IMG-VFAV-DTLDLADIEWSPDDSAIVIW-DSP------------------ 198 (419)
Q Consensus 154 ---~~----~g~v~i~d~~~~--~-----~~~-~~~~-~~~~v~~~~~~~~~~~l~~~-~~~------------------ 198 (419)
+. ...|..++.... + .+. .+.. .......++|.|||.+.+.. +..
T Consensus 104 ~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~ 183 (454)
T 1cru_A 104 KSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLPNQAQHTPT 183 (454)
T ss_dssp TC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCTTTTSGGGTTSCCCTTCCCC
T ss_pred CCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCCCCCCccccccccccccccc
Confidence 00 135666665431 1 111 1211 12346889999999866653 211
Q ss_pred -----------CCceEEEEcCCCce-----------EEEEeecCCCCceeEEEEccCCCeEEE
Q 014755 199 -----------LEYKVLIYSPDGRC-----------LLKYQAYESGLGVKSISWSPCGQFLAV 239 (419)
Q Consensus 199 -----------~~~~i~~~d~~~~~-----------~~~~~~~~~~~~v~~~~~s~~~~~l~~ 239 (419)
..+.|..++.+|.. ...+. ..+. ....++|+|+|++.++
T Consensus 184 ~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a-~G~R-Np~gla~dp~G~L~~~ 244 (454)
T 1cru_A 184 QQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYT-LGHR-NPQGLAFTPNGKLLQS 244 (454)
T ss_dssp HHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEE-BCCS-EEEEEEECTTSCEEEE
T ss_pred cccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEE-ECCC-CcceEEECCCCCEEEE
Confidence 13677777776651 12222 1221 5889999998765554
No 345
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.76 E-value=0.11 Score=40.57 Aligned_cols=165 Identities=10% Similarity=-0.018 Sum_probs=89.2
Q ss_pred CCEEEEEeCCeEEEEecCCCc------EEEEeec--CcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcc------ee
Q 014755 19 ARYIAVAVDYRLVVRDAHSFK------VVQLFSC--LDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEW------TC 84 (419)
Q Consensus 19 ~~~la~~~~~~i~i~~~~~~~------~~~~~~~--~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~------~~ 84 (419)
..+|++..+++++.=....+. ....++. -..+..++|+|+|.+.++ . + |.++-.+..+... -.
T Consensus 4 ~~~l~~v~~d~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV-~-~-G~Ly~~~~~t~~~~~W~~s~t 80 (236)
T 1tl2_A 4 ESMLRGVYQDKFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV-L-N-DKIYKGTPPTHDNDNWMGRAK 80 (236)
T ss_dssp CCCEEEEETTEEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE-E-T-TEEEEESCCCSTTCCHHHHCE
T ss_pred ceEEEEEeCCcEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE-e-C-CeEEEECCCCCCccccccccc
Confidence 445555554455554444443 1223343 357889999999986666 3 4 7776666544221 11
Q ss_pred eeec-CCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-------e-ccCCCCeeeEEEccCCCEEEEEeecCC
Q 014755 85 KIDE-GLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-------V-QSPKHASKGVAFTQDGKFAAICTRRDC 155 (419)
Q Consensus 85 ~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~l~~~~~~~~ 155 (419)
.+-. .-....++.|.|+|.+.++ .++ .|+-++..+..... + ...=..+..+.+.|+|.+.++. +
T Consensus 81 ~IG~~Gw~~F~a~~fD~~G~LYav--~dG-~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--d-- 153 (236)
T 1tl2_A 81 KIGNGGWNQFQFLFFDPNGYLYAV--SKD-KLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--G-- 153 (236)
T ss_dssp EEECSCGGGCSEEEECTTSCEEEE--ETT-EEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--T--
T ss_pred EecccccccceEEEECCCCCEEEe--CCC-EEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--C--
Confidence 1211 1112478999999987777 445 88877764311111 0 1111345899999999887776 3
Q ss_pred CCeEEEEeccCCe------EEEEEe-ccccceeeeeECCCCCeEEE
Q 014755 156 KDYINLLSCHTWE------IMGVFA-VDTLDLADIEWSPDDSAIVI 194 (419)
Q Consensus 156 ~g~v~i~d~~~~~------~~~~~~-~~~~~v~~~~~~~~~~~l~~ 194 (419)
+.++-....+.. ....+- ..-...+.+.|.+++...++
T Consensus 154 -g~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v 198 (236)
T 1tl2_A 154 -QQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGV 198 (236)
T ss_dssp -TEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEE
T ss_pred -CcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEE
Confidence 455433222110 001111 12223445668888877776
No 346
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.73 E-value=0.22 Score=42.27 Aligned_cols=148 Identities=12% Similarity=0.075 Sum_probs=84.7
Q ss_pred cCcceeEEEEecCCCeEEEEeccCCeEEEEEccCCcceee--e----ecCCccEeEEEECCC---CCEEEEE-e-cCCCe
Q 014755 46 CLDKISYIEWALDSEYILCGLYKRLMIQAWSLTQPEWTCK--I----DEGLAGIAYARWSPD---SRHILTT-S-DFQLR 114 (419)
Q Consensus 46 ~~~~v~~~~~s~~~~~l~~~~~~~g~i~iw~~~~~~~~~~--~----~~~~~~v~~~~~~~~---~~~l~~~-~-~~~~~ 114 (419)
.-.....|+|.|||+++++-. +.|.|++++..+++.... + .........++++|+ +..|++. + ...+.
T Consensus 30 gL~~P~~ia~~pdG~llVter-~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~ 108 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSR-DEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNR 108 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEET-TTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEE
T ss_pred CCCCceEEEEcCCCcEEEEEe-cCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCE
Confidence 456778999999998766654 248999998766543211 1 123456889999995 4445443 2 12236
Q ss_pred EEEEEcCCC----------eEEE--ec-cCCCCeeeEEEccCCCEEEEEeec----------CCCCeEEEEeccCCe---
Q 014755 115 LTVWSLLNT----------ACVH--VQ-SPKHASKGVAFTQDGKFAAICTRR----------DCKDYINLLSCHTWE--- 168 (419)
Q Consensus 115 i~iwd~~~~----------~~~~--~~-~~~~~~~~~~~~~~~~~l~~~~~~----------~~~g~v~i~d~~~~~--- 168 (419)
|.-|.+..+ +.+. +. ...+....+.|.|||.+.++.+.. ...|.|.-++.+..-
T Consensus 109 v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~ 188 (347)
T 3das_A 109 IVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPG 188 (347)
T ss_dssp EEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTT
T ss_pred EEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCC
Confidence 766766541 1111 21 122334779999999766664421 113566666665320
Q ss_pred ----EEEEEeccccceeeeeECCCCCeEEE
Q 014755 169 ----IMGVFAVDTLDLADIEWSPDDSAIVI 194 (419)
Q Consensus 169 ----~~~~~~~~~~~v~~~~~~~~~~~l~~ 194 (419)
....+...-.....++|+|+|.+.+.
T Consensus 189 nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~ 218 (347)
T 3das_A 189 NPFPGSPVYSYGHRNVQGLAWDDKQRLFAS 218 (347)
T ss_dssp CSSTTCCEEEBCCSBCCEEEECTTCCEEEE
T ss_pred CCCCCCeEEeeCCCCcceEEECCCCCEEEE
Confidence 01122222234678899998765543
No 347
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.64 E-value=0.19 Score=47.60 Aligned_cols=197 Identities=13% Similarity=0.075 Sum_probs=107.4
Q ss_pred cCCCeEEEEecc---CCeEEEEEccCCcceeee-e------cCCccEeEEEECC-CCCEEEEEecCC-----CeEEEEEc
Q 014755 57 LDSEYILCGLYK---RLMIQAWSLTQPEWTCKI-D------EGLAGIAYARWSP-DSRHILTTSDFQ-----LRLTVWSL 120 (419)
Q Consensus 57 ~~~~~l~~~~~~---~g~i~iw~~~~~~~~~~~-~------~~~~~v~~~~~~~-~~~~l~~~~~~~-----~~i~iwd~ 120 (419)
.++..++.|+.+ -..+.+||+.++++...- . .....-.+++..+ +++.++.||.+. ..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 466777777642 136889999888765333 1 1111122333333 777777776432 25889999
Q ss_pred CCCeEEEeccCCCCe--eeEEEccCCCEEEEEeecCCCCeEEEEeccCCeEEEEEe-----ccccceeeeeECCCCCeEE
Q 014755 121 LNTACVHVQSPKHAS--KGVAFTQDGKFAAICTRRDCKDYINLLSCHTWEIMGVFA-----VDTLDLADIEWSPDDSAIV 193 (419)
Q Consensus 121 ~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~ 193 (419)
.+.+...+.....+. .+++.-.+++.++.|+.+... .+.+||..+.+-...-. ........+.+..+...++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~-~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP-AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC-SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC-CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 998877643222222 334443477888888765432 79999998865433221 1112223355555534454
Q ss_pred EEcCCC------CceEEEEcC-CCce-----EEEEee--cCCCCceeEEEEccCCCeEEEEEec--------CcEEEEEc
Q 014755 194 IWDSPL------EYKVLIYSP-DGRC-----LLKYQA--YESGLGVKSISWSPCGQFLAVGSYD--------QTLRVLNH 251 (419)
Q Consensus 194 ~~~~~~------~~~i~~~d~-~~~~-----~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~d--------~~i~v~d~ 251 (419)
++.+.. ...+..||+ +... ...+.. .... .-.+++...+++.++.|+.+ ..+.+||+
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R-~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 633 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQR-YGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDP 633 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCC-BSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEET
T ss_pred EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCc-ccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEEC
Confidence 443321 256899999 4431 223322 1111 12233333447777777743 35888888
Q ss_pred CCce
Q 014755 252 LTWK 255 (419)
Q Consensus 252 ~~~~ 255 (419)
.+.+
T Consensus 634 ~t~~ 637 (695)
T 2zwa_A 634 LSET 637 (695)
T ss_dssp TTTE
T ss_pred CCCe
Confidence 7654
No 348
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.17 E-value=0.15 Score=43.14 Aligned_cols=114 Identities=11% Similarity=0.072 Sum_probs=69.4
Q ss_pred CEEEEEeecCCCCeEEEEeccCCeEEEEEeccc-cceeeeeE--CCCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecC
Q 014755 145 KFAAICTRRDCKDYINLLSCHTWEIMGVFAVDT-LDLADIEW--SPDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYE 220 (419)
Q Consensus 145 ~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~-~~v~~~~~--~~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~ 220 (419)
..+++++.| |.|+-+|..+|+..-.+.... .++....- .+.+..+++.....+|.|+.++. +|.....+....
T Consensus 11 ~~V~v~t~d---G~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~ 87 (339)
T 2be1_A 11 DILIAADVE---GGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQ 87 (339)
T ss_dssp EEEEEEETT---SCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHH
T ss_pred CEEEEEeCC---CeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccc
Confidence 356777776 899999999999888876541 12221110 11222444433357999999998 664443333211
Q ss_pred --CCCceeE---EEE-c----cCCCeEEEEEecCcEEEEEcCCceeeeeec
Q 014755 221 --SGLGVKS---ISW-S----PCGQFLAVGSYDQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 221 --~~~~v~~---~~~-s----~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 261 (419)
...++.. ..+ . ..+..+++|+.++.+...|+.+|+.+.++.
T Consensus 88 lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 88 LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp HHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred ceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 1001111 001 0 145578899999999999999999998886
No 349
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.12 E-value=0.53 Score=39.79 Aligned_cols=145 Identities=8% Similarity=0.033 Sum_probs=76.0
Q ss_pred CEEEEEecCCCeEEEEEcCCCeEEE-eccC-CCCeeeEE--EccCCCEEEEE--eecCCCCeEEEEeccCCeEEEEEecc
Q 014755 103 RHILTTSDFQLRLTVWSLLNTACVH-VQSP-KHASKGVA--FTQDGKFAAIC--TRRDCKDYINLLSCHTWEIMGVFAVD 176 (419)
Q Consensus 103 ~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~-~~~~~~~~--~~~~~~~l~~~--~~~~~~g~v~i~d~~~~~~~~~~~~~ 176 (419)
..+++++.|+ .|.-+|.++|+... +... ..+..... -.+.+..++++ ..+ |.|+.++..+|.....+...
T Consensus 11 ~~V~v~t~dG-~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~d---G~l~a~~~~~G~~~~~~~~~ 86 (339)
T 2be1_A 11 DILIAADVEG-GLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGD---GNIYYFNAHQGLQKLPLSIR 86 (339)
T ss_dssp EEEEEEETTS-CEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTT---TEEEEEETTTEEEEEEEEHH
T ss_pred CEEEEEeCCC-eEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCC---CEEEEEECCCCcEEeeeccc
Confidence 3567777777 89999999888776 3322 01111100 00112234443 244 89999999888555444332
Q ss_pred ccc-eeeeeEC-----------CCCCeEEEEcCCCCceEEEEcC-CCceEEEEeecCCCCc-----eeEEEEc-----cC
Q 014755 177 TLD-LADIEWS-----------PDDSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYESGLG-----VKSISWS-----PC 233 (419)
Q Consensus 177 ~~~-v~~~~~~-----------~~~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~~~~~-----v~~~~~s-----~~ 233 (419)
..- ..-+... ..+..+++ ++.++.++..|+ +|+.+..+........ ..|.... ..
T Consensus 87 ~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~--Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~ 164 (339)
T 2be1_A 87 QLVSTSPLHLKTNIVVNDSGKIVEDEKVYT--GSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQEC 164 (339)
T ss_dssp HHHTTCSEEEECC----------CCEEEEE--CEEEEEEEEEETTTCCEEEEESTTCBCC--------------------
T ss_pred cceeccccccCCCceeecccccccCCEEEE--EecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccC
Confidence 110 0001110 03344555 677899999999 9999888864321100 0111111 12
Q ss_pred CCeEEEEEecCcEEEEEcCCc
Q 014755 234 GQFLAVGSYDQTLRVLNHLTW 254 (419)
Q Consensus 234 ~~~l~~~~~d~~i~v~d~~~~ 254 (419)
+..|+.+..+..+.+.+ ++|
T Consensus 165 ~~~v~ig~~~y~v~~~~-~sG 184 (339)
T 2be1_A 165 ENMIVIGKTIFELGIHS-YDG 184 (339)
T ss_dssp CCEEEEEEEEEECEECC-TTS
T ss_pred CCeEEEecceEEEEEEC-CCC
Confidence 34677777776676666 444
No 350
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=94.21 E-value=2.4 Score=36.41 Aligned_cols=221 Identities=12% Similarity=0.030 Sum_probs=122.5
Q ss_pred eEE-cCCCCEEEEEe---CC---eEEEEecC--------CCcEEEEee------cCcceeEEEEecCCCeEEEEec----
Q 014755 13 SCF-SPNARYIAVAV---DY---RLVVRDAH--------SFKVVQLFS------CLDKISYIEWALDSEYILCGLY---- 67 (419)
Q Consensus 13 ~~~-s~d~~~la~~~---~~---~i~i~~~~--------~~~~~~~~~------~~~~v~~~~~s~~~~~l~~~~~---- 67 (419)
++. +.+|+.+++-= ++ ++-..+.. +.++++-+. +--.|..+...+.+++-+.=+.
T Consensus 31 v~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ll~PYP~w~~~~~lvsV~~v~iD~~~rLWVLDtG~~~~ 110 (381)
T 3q6k_A 31 FAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSGHKTGKELTSIYQPVIDDCRRLWVVDIGSVEY 110 (381)
T ss_dssp EEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSCCBEECTTCSSSCSSSCEEEEEECTTCEEEEEECSSCSS
T ss_pred eeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCcccccCCCCCccccceEEeeEEEEcCCCcEEEEeCCCcCc
Confidence 778 68888877762 22 35444432 223313322 2345778888877765553221
Q ss_pred ----------cCCeEEEEEccCC--cceeeeecC------CccEeEEEEC---CC----CCEEEEEecCCCeEEEEEcCC
Q 014755 68 ----------KRLMIQAWSLTQP--EWTCKIDEG------LAGIAYARWS---PD----SRHILTTSDFQLRLTVWSLLN 122 (419)
Q Consensus 68 ----------~~g~i~iw~~~~~--~~~~~~~~~------~~~v~~~~~~---~~----~~~l~~~~~~~~~i~iwd~~~ 122 (419)
..-.|.+||+.++ +.++++.-. ...+..+++. |+ +.+++.+......|.++|+.+
T Consensus 111 ~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~ 190 (381)
T 3q6k_A 111 RSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKK 190 (381)
T ss_dssp CSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTT
T ss_pred CCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCC
Confidence 0126889999999 888776432 2347777776 22 344555544445899999999
Q ss_pred CeEEEecc----C---------------CCCeeeEEEccC----CCEEEEEeecCCCCeEEEEeccC-----C---eEEE
Q 014755 123 TACVHVQS----P---------------KHASKGVAFTQD----GKFAAICTRRDCKDYINLLSCHT-----W---EIMG 171 (419)
Q Consensus 123 ~~~~~~~~----~---------------~~~~~~~~~~~~----~~~l~~~~~~~~~g~v~i~d~~~-----~---~~~~ 171 (419)
++..++.. . ...+..++++|+ ++.|...... .-++|.+.+ . ..++
T Consensus 191 ~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~pls----s~~ly~V~T~~L~~~~~~~~v~ 266 (381)
T 3q6k_A 191 QDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGS----AIKVYSVNTKELKQKGGKLNPE 266 (381)
T ss_dssp TEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESS----CSEEEEEEHHHHSSTTCCCCCE
T ss_pred CcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECC----CCcEEEEEHHHhhCcchhhceE
Confidence 88777331 1 125578888887 6777777653 223333321 1 1112
Q ss_pred EEecc--ccceeeeeEC-CCCCeEEEEcCCCCceEEEEcCCC-----ceEEEEeecCCCCceeEEEEccCCCeEEE
Q 014755 172 VFAVD--TLDLADIEWS-PDDSAIVIWDSPLEYKVLIYSPDG-----RCLLKYQAYESGLGVKSISWSPCGQFLAV 239 (419)
Q Consensus 172 ~~~~~--~~~v~~~~~~-~~~~~l~~~~~~~~~~i~~~d~~~-----~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 239 (419)
.+-.. ......+++. .+|..++. .-....|..|+..+ +....+.....-..+..+.+.++|.+.+.
T Consensus 267 ~~G~kg~~s~~~~~~~D~~~G~ly~~--~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~ 340 (381)
T 3q6k_A 267 LLGNRGKYNDAIALAYDPKTKVIFFA--EANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFM 340 (381)
T ss_dssp EEEECCTTCCEEEEEECTTTCEEEEE--ESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEE
T ss_pred EeeecCCCCCcceEEEeCCCCeEEEE--eccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEE
Confidence 11111 1233345665 45544433 34578899999865 22333333223235677777666643333
No 351
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=92.92 E-value=4.8 Score=35.81 Aligned_cols=103 Identities=9% Similarity=-0.007 Sum_probs=57.1
Q ss_pred ccEeEEEECCCCC-EEEEEecCCCeEEEEEcCCCe---EEE-ec---c------CCCCeeeEEEccC---CCEEEEEeec
Q 014755 91 AGIAYARWSPDSR-HILTTSDFQLRLTVWSLLNTA---CVH-VQ---S------PKHASKGVAFTQD---GKFAAICTRR 153 (419)
Q Consensus 91 ~~v~~~~~~~~~~-~l~~~~~~~~~i~iwd~~~~~---~~~-~~---~------~~~~~~~~~~~~~---~~~l~~~~~~ 153 (419)
.....|+|.|+|. .|+++...+ .|++++..... .+. +. . .......++|+|+ ..+|++....
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G-~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEG-YVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTT-EEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCceEEEECCCCCeEEEEEeCCc-eEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 4568899999996 455555655 99999754321 111 11 1 1345688999996 2344433221
Q ss_pred CCC----------CeEEEEeccC----------CeEEEEEe--ccccceeeeeECCCCCeEEE
Q 014755 154 DCK----------DYINLLSCHT----------WEIMGVFA--VDTLDLADIEWSPDDSAIVI 194 (419)
Q Consensus 154 ~~~----------g~v~i~d~~~----------~~~~~~~~--~~~~~v~~~~~~~~~~~l~~ 194 (419)
... ..|.-|.+.. .+.+..+. ........++|.|||.+.+.
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~ 155 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYII 155 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEE
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEE
Confidence 111 1344455432 22333332 12234678999999976665
No 352
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=91.85 E-value=6.6 Score=34.92 Aligned_cols=103 Identities=6% Similarity=-0.040 Sum_probs=57.8
Q ss_pred cccCeEEcCCCC--EEEEEeCCeEEEEecCCCc---EEEEe----e------cCcceeEEEEecC----CCeEEEEecc-
Q 014755 9 QTGPSCFSPNAR--YIAVAVDYRLVVRDAHSFK---VVQLF----S------CLDKISYIEWALD----SEYILCGLYK- 68 (419)
Q Consensus 9 ~~~~~~~s~d~~--~la~~~~~~i~i~~~~~~~---~~~~~----~------~~~~v~~~~~s~~----~~~l~~~~~~- 68 (419)
+.-.|+|.|||. ++++-..+.|++++..... .+..+ . .......|+|+|+ +.+.++-+.+
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 334489999995 6666568899999754321 11111 1 1356788999996 4333332221
Q ss_pred C----------CeEEEEEccCC----------cceeeee--cCCccEeEEEECCCCCEEEEEecC
Q 014755 69 R----------LMIQAWSLTQP----------EWTCKID--EGLAGIAYARWSPDSRHILTTSDF 111 (419)
Q Consensus 69 ~----------g~i~iw~~~~~----------~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~ 111 (419)
+ ..|.-|.+..+ +.+..+. ........|+|.|||.+.++.++.
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 1 13444665431 1122221 112235789999999877777653
No 353
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=90.59 E-value=7.6 Score=33.34 Aligned_cols=86 Identities=9% Similarity=-0.023 Sum_probs=53.7
Q ss_pred CeEEEEeccCC--eEEEEEecc------ccceeeeeEC---CC----CCeEEEEcCCCCceEEEEcC-CCceEEEEeecC
Q 014755 157 DYINLLSCHTW--EIMGVFAVD------TLDLADIEWS---PD----DSAIVIWDSPLEYKVLIYSP-DGRCLLKYQAYE 220 (419)
Q Consensus 157 g~v~i~d~~~~--~~~~~~~~~------~~~v~~~~~~---~~----~~~l~~~~~~~~~~i~~~d~-~~~~~~~~~~~~ 220 (419)
-+|.+||+.+. +.++.+... ...+..+.+. |+ +.++.+.|. ....|.++|+ +++..+.+....
T Consensus 123 pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~-~~~gLIVydl~~~~swRv~~~~~ 201 (381)
T 3q6k_A 123 PAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNF-LRGALFIYDHKKQDSWNVTHPTF 201 (381)
T ss_dssp CEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEET-TTTEEEEEETTTTEEEEEECGGG
T ss_pred ceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcC-CCCcEEEEECCCCcEEEEccCCC
Confidence 37889999998 888887653 2346666666 32 456667775 4678999999 555444432110
Q ss_pred C----------------CCceeEEEEccC----CCeEEEEEec
Q 014755 221 S----------------GLGVKSISWSPC----GQFLAVGSYD 243 (419)
Q Consensus 221 ~----------------~~~v~~~~~s~~----~~~l~~~~~d 243 (419)
. ...+..++++|+ ++.|......
T Consensus 202 ~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~pls 244 (381)
T 3q6k_A 202 KAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGS 244 (381)
T ss_dssp SCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESS
T ss_pred ccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECC
Confidence 0 125677777776 5556555543
No 354
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=89.98 E-value=13 Score=35.15 Aligned_cols=71 Identities=10% Similarity=0.223 Sum_probs=43.0
Q ss_pred ceEEEEEccCCeEEEEecCCCCceEEEeeccCCC--ceeec--ccCCCeeEEEeCCCCCeE-EEEeC---CCcEEEeecC
Q 014755 335 GIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQE--PAAIL--VQKDPIRAATWDPTCTRL-VLCTG---SSHLYMWTPS 406 (419)
Q Consensus 335 ~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~--~~~~~--~~~~~v~~~~~s~~~~~l-~s~~~---dg~i~vw~~~ 406 (419)
.+..+.+..+ .++++...+....|+++++.+++ ....+ ...+.+..+..++++..+ ++.+. -+.+..+++.
T Consensus 351 ~l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 351 VFNFISTTKD-RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEEEEECSS-CEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred eEEEEEEECC-EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 4677888876 45555555522357888887764 33312 223567777777887643 43332 3578888876
No 355
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=87.04 E-value=20 Score=35.31 Aligned_cols=37 Identities=14% Similarity=0.072 Sum_probs=31.7
Q ss_pred ceEEEEEccCCeEEEEecCCCCceEEEeeccCCCceeec
Q 014755 335 GIGLMSWSSDSQYICTRNDSMPTTLWIWDICRQEPAAIL 373 (419)
Q Consensus 335 ~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~~~~~~~~ 373 (419)
.+.+++..++..++++-+.| +++|+|++.+++++...
T Consensus 237 ~~~~~~~~~~~~~lftl~~D--~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLD--YKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETT--CEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECC--CEEEEEECCCCCeEeee
Confidence 46778888899999999999 99999999999877544
No 356
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=85.86 E-value=29 Score=34.28 Aligned_cols=35 Identities=20% Similarity=0.174 Sum_probs=30.9
Q ss_pred cEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE
Q 014755 92 GIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH 127 (419)
Q Consensus 92 ~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~ 127 (419)
.+.+++..++..++++.+.|. ++++|++.+++++.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~-~LRiWsl~t~~~v~ 271 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDY-KLKVLDLSTNQCVE 271 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTC-EEEEEETTTTEEEE
T ss_pred eEEEEeecCCCcEEEEEECCC-EEEEEECCCCCeEe
Confidence 467777888889999999998 99999999999887
No 357
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=84.29 E-value=19 Score=30.97 Aligned_cols=212 Identities=7% Similarity=-0.145 Sum_probs=99.6
Q ss_pred CEEEEEeCCeEEEEecCC-C-cEEEE--eecCcceeEEEEec--CCCeEEEEeccCC----eEEEEEccCCcceeeeec-
Q 014755 20 RYIAVAVDYRLVVRDAHS-F-KVVQL--FSCLDKISYIEWAL--DSEYILCGLYKRL----MIQAWSLTQPEWTCKIDE- 88 (419)
Q Consensus 20 ~~la~~~~~~i~i~~~~~-~-~~~~~--~~~~~~v~~~~~s~--~~~~l~~~~~~~g----~i~iw~~~~~~~~~~~~~- 88 (419)
..|.++....+.+++... + ..... ......|.+|++.| ++... ++... | .|...+ +.++.-..+..
T Consensus 23 g~l~vgt~~Gl~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~-~g~~~-g~~g~gl~~s~-D~G~tW~~~~~~ 99 (394)
T 3b7f_A 23 VMLLVATIKGAWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERML-MAART-GHLGPTVFRSD-DGGGNWTEATRP 99 (394)
T ss_dssp CEEEEEETTEEEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEE-EEEEC---CCEEEEEES-STTSCCEECSBC
T ss_pred CEEEEEecCceEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEE-EEecC-CCCCccEEEeC-CCCCCceECCcc
Confidence 456667655577776543 2 22222 12345799999998 44444 44433 4 343322 23322122211
Q ss_pred -------------CCccEeEEEECCC--CCEEEEEecCCCeEEEEEcCCCeEEEecc-------------------CCCC
Q 014755 89 -------------GLAGIAYARWSPD--SRHILTTSDFQLRLTVWSLLNTACVHVQS-------------------PKHA 134 (419)
Q Consensus 89 -------------~~~~v~~~~~~~~--~~~l~~~~~~~~~i~iwd~~~~~~~~~~~-------------------~~~~ 134 (419)
....|.++++.|. ...++++...+ .|...+-.......+.. ....
T Consensus 100 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~g-gl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~ 178 (394)
T 3b7f_A 100 PAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQ-GLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPK 178 (394)
T ss_dssp CCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETT-EEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCE
T ss_pred ccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCC-cEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCc
Confidence 1125778899872 45566665544 44433222222222211 1224
Q ss_pred eeeEEEccC-CCEEEEEeecCCCCeEEEEecc--CCeEEEE-Eecc---------ccceeeeeECCC-CCeEEEEcCCCC
Q 014755 135 SKGVAFTQD-GKFAAICTRRDCKDYINLLSCH--TWEIMGV-FAVD---------TLDLADIEWSPD-DSAIVIWDSPLE 200 (419)
Q Consensus 135 ~~~~~~~~~-~~~l~~~~~~~~~g~v~i~d~~--~~~~~~~-~~~~---------~~~v~~~~~~~~-~~~l~~~~~~~~ 200 (419)
+.++.++|. ...++++... +.|...+-. +++.+.. .... ...+.++.+.|+ ...+.+. . .
T Consensus 179 i~~i~~d~~~~~~l~vg~~~---ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg--~-~ 252 (394)
T 3b7f_A 179 MHSILVDPRDPKHLYIGMSS---GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQ--N-H 252 (394)
T ss_dssp EEEEEECTTCTTCEEEEEET---BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEE--E-T
T ss_pred eeEEEECCCCCCEEEEEECC---CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEE--c-C
Confidence 578888874 3455555543 344443211 2222211 0000 124788889886 3455542 2 3
Q ss_pred ceEEEEcCCCceEEEEeecCCC---CceeEEEEccC-CCeEEEEE
Q 014755 201 YKVLIYSPDGRCLLKYQAYESG---LGVKSISWSPC-GQFLAVGS 241 (419)
Q Consensus 201 ~~i~~~d~~~~~~~~~~~~~~~---~~v~~~~~s~~-~~~l~~~~ 241 (419)
+.|+..+-.++....+...... ..+..++++|. ...|..+.
T Consensus 253 ~gl~~s~D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t 297 (394)
T 3b7f_A 253 CGIYRMDRREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFP 297 (394)
T ss_dssp TEEEEEETTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEE
T ss_pred CeEEEeCCCCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEe
Confidence 4465555445444433221111 23567788763 34444443
No 358
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=83.50 E-value=9.2 Score=35.13 Aligned_cols=60 Identities=22% Similarity=0.237 Sum_probs=43.8
Q ss_pred eeeeeECCCCCeEEEEcCCC----------CceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEE
Q 014755 180 LADIEWSPDDSAIVIWDSPL----------EYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVG 240 (419)
Q Consensus 180 v~~~~~~~~~~~l~~~~~~~----------~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 240 (419)
.-.|+|+|.|.+++.-|+.. .+.+.+.+. +++..+.+... ....++.++|+||++.|++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P-~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP-IGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECC-TTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCC-CCccCcCeeECCCCCEEEEE
Confidence 46789999999888776542 245777777 66665555554 34589999999999877664
No 359
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=82.46 E-value=21 Score=29.96 Aligned_cols=68 Identities=9% Similarity=-0.089 Sum_probs=37.9
Q ss_pred EEEEEccCCeEEEEecCCCCceEEEeecc--CCCc-------eee--cccCCCeeEEEeCCCCCeEEEEeCCCcEEEeec
Q 014755 337 GLMSWSSDSQYICTRNDSMPTTLWIWDIC--RQEP-------AAI--LVQKDPIRAATWDPTCTRLVLCTGSSHLYMWTP 405 (419)
Q Consensus 337 ~~~~~s~~g~~l~~~~~d~~~~i~iwd~~--~~~~-------~~~--~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~ 405 (419)
..+........|+..+.. |.+..+... .-.. ... +.....|.++...+++..|+.++..|.++.-.+
T Consensus 149 v~~~~~~~~d~ill~T~~--G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l 226 (327)
T 3uc1_A 149 VGAVLCSAGDDLLLVSAN--GQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAI 226 (327)
T ss_dssp EEEEEECTTCEEEEEETT--SEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEG
T ss_pred EEEEEecCCCEEEEEECC--CeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEH
Confidence 333333333445555555 777777665 2111 111 123455776666666667888888888777655
Q ss_pred C
Q 014755 406 S 406 (419)
Q Consensus 406 ~ 406 (419)
.
T Consensus 227 ~ 227 (327)
T 3uc1_A 227 E 227 (327)
T ss_dssp G
T ss_pred H
Confidence 3
No 360
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=82.30 E-value=12 Score=34.07 Aligned_cols=62 Identities=21% Similarity=0.223 Sum_probs=44.0
Q ss_pred ceeeeeECCCCCeEEEEcCCC----------CceEEEEcC-CCceEEEEeecCCCCceeEEEEccCCCeEEEEE
Q 014755 179 DLADIEWSPDDSAIVIWDSPL----------EYKVLIYSP-DGRCLLKYQAYESGLGVKSISWSPCGQFLAVGS 241 (419)
Q Consensus 179 ~v~~~~~~~~~~~l~~~~~~~----------~~~i~~~d~-~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 241 (419)
....|.|.++|.+.+..|... .+.++.++. +|+....+... ....++.++|+||++.|++.-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P-~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP-IGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECC-TTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCC-CCccccCCEECCCCCEEEEEE
Confidence 356799999998887666531 237888888 67665555432 223689999999999887764
No 361
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=82.20 E-value=5 Score=36.85 Aligned_cols=59 Identities=8% Similarity=0.075 Sum_probs=43.5
Q ss_pred eEEEEEccCCeEEEEecCC----------CCceEEEeeccCCCceeecc--cCCCeeEEEeCCCCCeEEEE
Q 014755 336 IGLMSWSSDSQYICTRNDS----------MPTTLWIWDICRQEPAAILV--QKDPIRAATWDPTCTRLVLC 394 (419)
Q Consensus 336 v~~~~~s~~g~~l~~~~~d----------~~~~i~iwd~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~ 394 (419)
.-.|+|+|.|++++.-..+ ..+.+.+.+..++++..++. ...+++.++|+||++.|...
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4678999999977665432 11356777778888887763 55789999999999977655
No 362
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=79.01 E-value=8.7 Score=34.94 Aligned_cols=58 Identities=10% Similarity=0.166 Sum_probs=42.9
Q ss_pred eEEcCCCCEEEEEe-------------CCeEEEEecCCCcEEEEeec--CcceeEEEEecCCCeEEEEeccCC
Q 014755 13 SCFSPNARYIAVAV-------------DYRLVVRDAHSFKVVQLFSC--LDKISYIEWALDSEYILCGLYKRL 70 (419)
Q Consensus 13 ~~~s~d~~~la~~~-------------~~~i~i~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~~~g 70 (419)
|+|+++|.+.+... ...|..++..++++...+.. ...++.++|+||++.|++.-..-|
T Consensus 481 L~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQHPG 553 (592)
T 4a9v_A 481 LGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQHPG 553 (592)
T ss_dssp EEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEESTT
T ss_pred eEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEeCCC
Confidence 89999997666321 11577778888888776642 357899999999999988865433
No 363
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=70.70 E-value=41 Score=27.30 Aligned_cols=143 Identities=17% Similarity=0.083 Sum_probs=76.7
Q ss_pred cCCCCEEEEEeCCeEEE---EecCCCcEEEEeecCcceeEEEEec--CCCeEEEEeccCCeEEEEEccCCc------cee
Q 014755 16 SPNARYIAVAVDYRLVV---RDAHSFKVVQLFSCLDKISYIEWAL--DSEYILCGLYKRLMIQAWSLTQPE------WTC 84 (419)
Q Consensus 16 s~d~~~la~~~~~~i~i---~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~~~g~i~iw~~~~~~------~~~ 84 (419)
+....++++.+.|.++- +++..+....++...+.|..+.. + +..+++..+.+ |.++-..+..-. ...
T Consensus 33 ~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~~~e~i~~v~~-~~~~~~~~v~~T~~-G~iKr~~l~~~~~~~~G~~~i 110 (276)
T 3no0_A 33 PFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKSREEKIVGAFI-REKFGNRLLLATKK-GYVKKIPLAEFEYKAQGMPII 110 (276)
T ss_dssp ETTSCEEEEETTSEEEEECSHHHHTSEECCCSSTTCCEEEEEE-GGGSCSEEEEEETT-SEEEEEEGGGTTTCSTTEECS
T ss_pred CCCCEEEEEcCCCeEEEEEhhhCccCcccccCCCCCEEEEEEC-CcCCCCEEEEEeCC-CEEEEEEHHHhhhhcCCeEEE
Confidence 34445566666776553 44432211101444556666644 4 46788888866 999998876532 111
Q ss_pred eeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCC----C---eEEE-e-ccCCCCeeeEEEccCCCEEEEEeecCC
Q 014755 85 KIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLN----T---ACVH-V-QSPKHASKGVAFTQDGKFAAICTRRDC 155 (419)
Q Consensus 85 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~----~---~~~~-~-~~~~~~~~~~~~~~~~~~l~~~~~~~~ 155 (419)
.+. ..+.+..+........++..+..+ .+..+.... + .-.. + ......+..+...+++..++..+..
T Consensus 111 ~lk-egD~l~~~~~~~~~~~ill~T~~G-~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~-- 186 (276)
T 3no0_A 111 KLT-EGDEVVSIASSVDETHILLFTKKG-RVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLVITAK-- 186 (276)
T ss_dssp CCC-TTCCEEEEEECCSSCEEEEEETTS-EEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEEEETT--
T ss_pred ecC-CCCEEEEEEEeCCCCEEEEEECCC-EEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEEEeCC--
Confidence 122 234555565665666777777766 777776542 1 1111 1 1123444444444445566666664
Q ss_pred CCeEEEEecc
Q 014755 156 KDYINLLSCH 165 (419)
Q Consensus 156 ~g~v~i~d~~ 165 (419)
|.++...+.
T Consensus 187 -G~~kr~~~~ 195 (276)
T 3no0_A 187 -GRVKKISHE 195 (276)
T ss_dssp -SCEEEEEGG
T ss_pred -CcEEEeEHH
Confidence 667766654
No 364
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=66.64 E-value=4.6 Score=40.79 Aligned_cols=36 Identities=22% Similarity=0.207 Sum_probs=30.2
Q ss_pred CeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEEec
Q 014755 378 PIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCVSN 413 (419)
Q Consensus 378 ~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~ 413 (419)
.+.+++..++..+|++-+.|+++|+|++.+++++..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEe
Confidence 445566677888999999999999999999988754
No 365
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=63.58 E-value=9.9 Score=35.67 Aligned_cols=34 Identities=18% Similarity=0.325 Sum_probs=27.7
Q ss_pred CeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEEec
Q 014755 378 PIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCVSN 413 (419)
Q Consensus 378 ~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~~ 413 (419)
.|.++.+ +..+|++-+.|.++|+|++.+++++..
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t 256 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQD 256 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEe
Confidence 4555555 467999999999999999999987654
No 366
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=54.45 E-value=9.5 Score=38.55 Aligned_cols=38 Identities=21% Similarity=0.167 Sum_probs=33.1
Q ss_pred ceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeec
Q 014755 224 GVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFM 261 (419)
Q Consensus 224 ~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 261 (419)
.+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 45566777888999999999999999999999988876
No 367
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=52.08 E-value=21 Score=33.58 Aligned_cols=37 Identities=8% Similarity=0.197 Sum_probs=30.3
Q ss_pred ceeEEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecc
Q 014755 224 GVKSISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMH 262 (419)
Q Consensus 224 ~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 262 (419)
.|.++.+ +..++++-+.|.++|+|++.+++++.+..-
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4555555 467999999999999999999999888763
No 368
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=51.33 E-value=1.2e+02 Score=26.00 Aligned_cols=196 Identities=6% Similarity=-0.029 Sum_probs=0.0
Q ss_pred cCCCEEEEEeecCCCCeEEEEeccC---------CeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC----
Q 014755 142 QDGKFAAICTRRDCKDYINLLSCHT---------WEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP---- 208 (419)
Q Consensus 142 ~~~~~l~~~~~~~~~g~v~i~d~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~---- 208 (419)
|+..++++.+.+ |.|+--.+.. +.....++..+.-+.....+.....+++.+.+.--.+.++++
T Consensus 5 ~~e~~~v~lT~~---GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~ 81 (370)
T 3l6v_A 5 APEDVVVTLSHA---GYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAG 81 (370)
T ss_dssp CCCCEEEEEESS---CEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCC
T ss_pred cCCCEEEEEeCC---CEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCC
Q ss_pred ---CCceEEEEeecCCCCceeEEEEc---cCCCeEEEEEecCcEEEEEcCCceeeeeec-ccccccCCCccceeccCCCc
Q 014755 209 ---DGRCLLKYQAYESGLGVKSISWS---PCGQFLAVGSYDQTLRVLNHLTWKTFAEFM-HLSTVRGPCFPAVFKEVDEP 281 (419)
Q Consensus 209 ---~~~~~~~~~~~~~~~~v~~~~~s---~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 281 (419)
.|..+..+-.......|.++..- .++.+|+.++..|.++...+........-. ..-.+
T Consensus 82 r~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L--------------- 146 (370)
T 3l6v_A 82 SNARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINL--------------- 146 (370)
T ss_dssp TTSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCC---------------
T ss_pred cccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEe---------------
Q ss_pred ccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEE
Q 014755 282 LQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWI 361 (419)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~i 361 (419)
...+.+..+....+...++..+.. |.+..
T Consensus 147 -------------------------------------------------~~~d~lv~v~~~~~~~~i~l~T~~--G~~ir 175 (370)
T 3l6v_A 147 -------------------------------------------------DEGDALVGVALTDGDRDVLLFASN--GKTVR 175 (370)
T ss_dssp -------------------------------------------------CTTCCEEEEEEECSCCEEEEEETT--SEEEE
T ss_pred -------------------------------------------------CCCCEEEEEEEeCCCceEEEEeCC--CeEEE
Q ss_pred eeccC---------CCceeecccCCCeeEEEeCC-----------------------------------CCCeEEEEeCC
Q 014755 362 WDICR---------QEPAAILVQKDPIRAATWDP-----------------------------------TCTRLVLCTGS 397 (419)
Q Consensus 362 wd~~~---------~~~~~~~~~~~~v~~~~~s~-----------------------------------~~~~l~s~~~d 397 (419)
+.... |-..-.+.....|.++...+ ++..|++.+..
T Consensus 176 f~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~~~~~~~~~il~vTe~ 255 (370)
T 3l6v_A 176 FGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDVADNGDVAYILTATEN 255 (370)
T ss_dssp EEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC-----------------------------------CEEEEEETT
T ss_pred EEccccCccCCCCCCeeeEEeCCCCEEEEEEEeccccccccccccccccccccccccccccccccccccCCceEEEeeCC
Q ss_pred CcEEEeecC
Q 014755 398 SHLYMWTPS 406 (419)
Q Consensus 398 g~i~vw~~~ 406 (419)
|..+...+.
T Consensus 256 G~gKrt~~~ 264 (370)
T 3l6v_A 256 GYGKRTPLA 264 (370)
T ss_dssp SEEEEEEGG
T ss_pred CCEEEEEHH
No 369
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=44.19 E-value=1.3e+02 Score=24.41 Aligned_cols=112 Identities=10% Similarity=-0.037 Sum_probs=58.3
Q ss_pred cceeEEEEecCCCeEEEEeccCCeEEEEE---ccCCcceeeeecCCccEeEEEECC-CCCEEEEEecCCCeEEEEEcCCC
Q 014755 48 DKISYIEWALDSEYILCGLYKRLMIQAWS---LTQPEWTCKIDEGLAGIAYARWSP-DSRHILTTSDFQLRLTVWSLLNT 123 (419)
Q Consensus 48 ~~v~~~~~s~~~~~l~~~~~~~g~i~iw~---~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~i~iwd~~~~ 123 (419)
+.+..+.-....++|+.-+.. |.++-.. +..+.... +......|..+.... +..+++..+..+ .++-..+..-
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~-G~v~~~~~~~lp~~~~~~-ll~~~e~i~~v~~~~~~~~~~v~~T~~G-~iKr~~l~~~ 100 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNR-GRVYWIAGSQALQGSKVS-LKSREEKIVGAFIREKFGNRLLLATKKG-YVKKIPLAEF 100 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETT-SEEEEECSHHHHTSEECC-CSSTTCCEEEEEEGGGSCSEEEEEETTS-EEEEEEGGGT
T ss_pred CeEEEEEEECCCCEEEEEcCC-CeEEEEEhhhCccCcccc-cCCCCCEEEEEECCcCCCCEEEEEeCCC-EEEEEEHHHh
Confidence 345554444444455554434 7666443 32221111 222344566654421 567888888877 9998887542
Q ss_pred e-----EEEe-ccCCCCeeeEEEccCCCEEEEEeecCCCCeEEEEecc
Q 014755 124 A-----CVHV-QSPKHASKGVAFTQDGKFAAICTRRDCKDYINLLSCH 165 (419)
Q Consensus 124 ~-----~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~v~i~d~~ 165 (419)
. ...+ ......+..+........++..+.. |.++.++..
T Consensus 101 ~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~---G~~~r~~~~ 145 (276)
T 3no0_A 101 EYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKK---GRVARFSVR 145 (276)
T ss_dssp TTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETT---SEEEEEEGG
T ss_pred hhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECC---CEEEEEEhh
Confidence 1 1111 1123445455454455566666664 777777653
No 370
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=34.72 E-value=1.9e+02 Score=23.81 Aligned_cols=187 Identities=10% Similarity=0.077 Sum_probs=0.0
Q ss_pred cCCCEEEEEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcCCCceEEEEee---
Q 014755 142 QDGKFAAICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSPDGRCLLKYQA--- 218 (419)
Q Consensus 142 ~~~~~l~~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~~~~~~~~~~~--- 218 (419)
++..++++.+.+ |.|+-..+...+.... ....+..+.+-.+...+.+..+.....+.++.-.|.....-..
T Consensus 6 ~~e~~~v~~T~~---G~iKr~~~~~~~~~~~---~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip 79 (312)
T 1suu_A 6 QKENIVVMLTKK---GFLKRLSQNEYKLQGT---GGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIK 79 (312)
T ss_dssp --CEEEEEEETT---CBEEEEEGGGSCBCCS---SCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSC
T ss_pred CCCCEEEEEeCC---CEEEEeEHHHhhcccc---CCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCC
Q ss_pred ----------------cCCCCceeEEEEcc---CCCeEEEEEecCcEEEEEc-------CCceeeeeecccccccCCCcc
Q 014755 219 ----------------YESGLGVKSISWSP---CGQFLAVGSYDQTLRVLNH-------LTWKTFAEFMHLSTVRGPCFP 272 (419)
Q Consensus 219 ----------------~~~~~~v~~~~~s~---~~~~l~~~~~d~~i~v~d~-------~~~~~~~~~~~~~~~~~~~~~ 272 (419)
......+.++..-+ +..+++..+..|.++...+ ..|.....+.
T Consensus 80 ~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~----------- 148 (312)
T 1suu_A 80 DSSRASKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLN----------- 148 (312)
T ss_dssp C-------CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCC-----------
T ss_pred CCCccCCCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecC-----------
Q ss_pred ceeccCCCcccccceeeeccCccccccccccCCceEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEec
Q 014755 273 AVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGHIKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRN 352 (419)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 352 (419)
..+.+..+....+...++..+
T Consensus 149 -----------------------------------------------------------~~d~lv~~~~~~~~~~i~l~T 169 (312)
T 1suu_A 149 -----------------------------------------------------------DKDFVTSAEIVFKDEKVICLS 169 (312)
T ss_dssp -----------------------------------------------------------TTCCEEEEEEECTTCEEEEEE
T ss_pred -----------------------------------------------------------CCCEEEEEEEeCCCCEEEEEe
Q ss_pred CCCCceEEEeeccC---------CCceeecccCCCeeEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 353 DSMPTTLWIWDICR---------QEPAAILVQKDPIRAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 353 ~d~~~~i~iwd~~~---------~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
.+ |.+..+.... |...-.+.....|.++..-+++..|++.+..|..+...++
T Consensus 170 ~~--G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 170 KK--GSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp TT--SEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred CC--CcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHH
No 371
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=32.20 E-value=3.5e+02 Score=25.99 Aligned_cols=139 Identities=6% Similarity=-0.040 Sum_probs=66.2
Q ss_pred cccCeEEcCCC-CEEEEEe-CCeEEEEecCCCcEEEEee-c-------CcceeEEEEecCC-CeEEEEeccCCe----EE
Q 014755 9 QTGPSCFSPNA-RYIAVAV-DYRLVVRDAHSFKVVQLFS-C-------LDKISYIEWALDS-EYILCGLYKRLM----IQ 73 (419)
Q Consensus 9 ~~~~~~~s~d~-~~la~~~-~~~i~i~~~~~~~~~~~~~-~-------~~~v~~~~~s~~~-~~l~~~~~~~g~----i~ 73 (419)
+...|+++|.. ..+.++. .+.|...+ +.++.-..+. + ...+.+|++.|.. ..++++... .. -.
T Consensus 16 ~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~-~~~~~~~~ 93 (789)
T 1sqj_A 16 YITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGR-YVGDEWAA 93 (789)
T ss_dssp CEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECS-CTTSSCCE
T ss_pred cEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCc-cCCCcccE
Confidence 44458899853 4444454 55565554 3344333222 1 2369999999843 344444322 11 34
Q ss_pred EEEcc-CCcceeeeecC---------CccEeEEEECCCC-CEEEEEecCCCeEEEEEcC-CCeEEE-ecc------CCCC
Q 014755 74 AWSLT-QPEWTCKIDEG---------LAGIAYARWSPDS-RHILTTSDFQLRLTVWSLL-NTACVH-VQS------PKHA 134 (419)
Q Consensus 74 iw~~~-~~~~~~~~~~~---------~~~v~~~~~~~~~-~~l~~~~~~~~~i~iwd~~-~~~~~~-~~~------~~~~ 134 (419)
||... .|+.-..+... ...+..+++.|.. ..++.+...+ . +|--. .|+.-. +.. ....
T Consensus 94 v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~-g--l~~S~DgG~TW~~~~~~~~~~~~~~~ 170 (789)
T 1sqj_A 94 FYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTE-G--IWKSSDRAKTWTNVTSIPDAFTNGIG 170 (789)
T ss_dssp EEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSS-C--EEEESSTTSSCEEETTSCCCCSTTTC
T ss_pred EEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccC-C--EEEECCCCcccCCCccCccccCCCCC
Confidence 44433 33322222110 1134567888754 4444544333 3 33322 233222 221 1245
Q ss_pred eeeEEEccCC-CEEEEEee
Q 014755 135 SKGVAFTQDG-KFAAICTR 152 (419)
Q Consensus 135 ~~~~~~~~~~-~~l~~~~~ 152 (419)
+..+.++|.. ..++++..
T Consensus 171 ~~~i~~~p~~~~~~~~~~~ 189 (789)
T 1sqj_A 171 YTSVIFDPERNGTIYASAT 189 (789)
T ss_dssp EEEEEECTTSTTCEEEEES
T ss_pred eEEEEECCCCCCEEEEEEc
Confidence 6788888853 45555543
No 372
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=28.07 E-value=2.8e+02 Score=23.61 Aligned_cols=30 Identities=13% Similarity=-0.039 Sum_probs=19.3
Q ss_pred ceeEEEEccCCCeEEEEEecCcEEEEEcCC
Q 014755 224 GVKSISWSPCGQFLAVGSYDQTLRVLNHLT 253 (419)
Q Consensus 224 ~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~ 253 (419)
.+..++......+.+.-..||.|+.|-...
T Consensus 212 ~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~ 241 (389)
T 3kci_A 212 RVVDIACGSGDAQTLCLTDDDTVWSWGDGD 241 (389)
T ss_dssp CEEEEEECCSSCEEEEEETTTEEEEEECCG
T ss_pred eEEEEEEcCCCcEEEEEccCCEEEEEeCCC
Confidence 466666544334666667788999987543
No 373
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=27.00 E-value=2.9e+02 Score=23.48 Aligned_cols=150 Identities=15% Similarity=0.121 Sum_probs=70.7
Q ss_pred EeEEEECCCCCEEEEEecCCCeEEEEEcCC------------CeEEEeccC-CCCeeeEEEccCCCEEEEEeecCCCCeE
Q 014755 93 IAYARWSPDSRHILTTSDFQLRLTVWSLLN------------TACVHVQSP-KHASKGVAFTQDGKFAAICTRRDCKDYI 159 (419)
Q Consensus 93 v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~------------~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~g~v 159 (419)
+..++.+....+.+....++ .|+.|-... ..+..+... ...+..++.. ....++...+ |.|
T Consensus 107 ~~~v~i~~G~~h~~al~~~G-~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~---G~v 180 (389)
T 3kci_A 107 IKKVAVNSGGKHCLALSSEG-EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAA---GDL 180 (389)
T ss_dssp EEEEEECTTCSEEEEEETTS-CEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETT---SCE
T ss_pred eeEEEECcCCCeEEEEcCCC-CEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCC---CeE
Confidence 45566666666666666666 888885432 112222221 2234444432 3333444443 678
Q ss_pred EEEeccC-Ce----------EEEEEec-cccceeeeeECCCCCeEEEEcCCCCceEEEEcC--CCce----------EEE
Q 014755 160 NLLSCHT-WE----------IMGVFAV-DTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP--DGRC----------LLK 215 (419)
Q Consensus 160 ~i~d~~~-~~----------~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~--~~~~----------~~~ 215 (419)
+.|-... ++ ....+.. ....+..++........++ ...++.|+.|-. .+++ ...
T Consensus 181 ~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~--l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~ 258 (389)
T 3kci_A 181 YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC--LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMK 258 (389)
T ss_dssp EEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEE--EETTTEEEEEECCGGGTTSSSSCCCEEEEEE
T ss_pred EEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEE--EccCCEEEEEeCCCCCCCCCCCCCCccccEE
Confidence 8885432 11 1111111 1234556655432233333 244788888864 1211 111
Q ss_pred EeecCCCCceeEEEEccCCCeEEEEEecCcEEEEEcCC
Q 014755 216 YQAYESGLGVKSISWSPCGQFLAVGSYDQTLRVLNHLT 253 (419)
Q Consensus 216 ~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v~d~~~ 253 (419)
+... ....|..++.. ..+.+.-..+|.|+.|-...
T Consensus 259 v~~~-~~~~v~~v~~G--~~hs~alt~~G~v~~wG~n~ 293 (389)
T 3kci_A 259 IDSL-TGLGVVKVECG--SQFSVALTKSGAVYTWGKGD 293 (389)
T ss_dssp CGGG-TTSCEEEEEEE--TTEEEEEETTSCEEEEECCG
T ss_pred eccc-CCCcEEEEeCC--CCEEEEEeCCCeEEEEeCCC
Confidence 1111 11135555443 23445556788999997543
No 374
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=26.72 E-value=1.5e+02 Score=19.91 Aligned_cols=25 Identities=0% Similarity=-0.146 Sum_probs=13.2
Q ss_pred eEEEeCCCCCeEEEEeCCCcEEEeecC
Q 014755 380 RAATWDPTCTRLVLCTGSSHLYMWTPS 406 (419)
Q Consensus 380 ~~~~~s~~~~~l~s~~~dg~i~vw~~~ 406 (419)
..+.+..+|.+++... ++.+ +|.-.
T Consensus 59 ~~l~l~~dGNLVl~d~-~~~~-iW~S~ 83 (113)
T 3mez_B 59 CFMRLGHSGELDITDD-RLNT-VFVSN 83 (113)
T ss_dssp CEEEECTTSCEEEECT-TSCE-EEECS
T ss_pred EEEEEeCCCcEEEECC-CCCE-EEECC
Confidence 3456666776555432 3333 66654
No 375
>3ge2_A Lipoprotein, putative; beta-barrel, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.20A {Streptococcus pneumoniae}
Probab=24.84 E-value=1.3e+02 Score=20.57 Aligned_cols=35 Identities=17% Similarity=0.393 Sum_probs=26.6
Q ss_pred cCCCeeEEEeCCCCCeEEEEeCCCcEEEeecCCCeEEe
Q 014755 375 QKDPIRAATWDPTCTRLVLCTGSSHLYMWTPSGAYCVS 412 (419)
Q Consensus 375 ~~~~v~~~~~s~~~~~l~s~~~dg~i~vw~~~~~~~~~ 412 (419)
....|..|.|.|..+.|..|. -++.|.+++.++.-
T Consensus 81 GdqEikqV~iD~~NQ~m~IGD---Dvk~Y~lnGnQLti 115 (130)
T 3ge2_A 81 GDQKVKQVTFDSANQRMIIGD---DVKIYTVNGNQIVV 115 (130)
T ss_dssp SCEEEEEEEEETTTTEEEETT---EEEEEEEETTEEEE
T ss_pred CCeeeEEEEEccCcCEEEecC---cceEEEecCCEEEE
Confidence 445788999999999887663 37888888777653
No 376
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=23.96 E-value=3.3e+02 Score=23.05 Aligned_cols=108 Identities=6% Similarity=-0.090 Sum_probs=53.5
Q ss_pred ceeEEEEecC--CCeEEEEeccCCeEEEEEccCCcceeeeec-------------------CCccEeEEEECCC-CCEEE
Q 014755 49 KISYIEWALD--SEYILCGLYKRLMIQAWSLTQPEWTCKIDE-------------------GLAGIAYARWSPD-SRHIL 106 (419)
Q Consensus 49 ~v~~~~~s~~--~~~l~~~~~~~g~i~iw~~~~~~~~~~~~~-------------------~~~~v~~~~~~~~-~~~l~ 106 (419)
.|.++++.|. ...|.++... +.|...+ +.++.-..+.. ....+.++.+.|. ...++
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~-ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~ 193 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSP-QGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLY 193 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEET-TEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEE
T ss_pred ceeEEEeCCCCCCCEEEEEecC-CcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEE
Confidence 4778899872 4556555544 4444433 22322222211 1235788999883 44555
Q ss_pred EEecCCCeEEEEEcCCCeEEEecc-C------------CCCeeeEEEccCC-CEEEEEeecCCCCeEEEEe
Q 014755 107 TTSDFQLRLTVWSLLNTACVHVQS-P------------KHASKGVAFTQDG-KFAAICTRRDCKDYINLLS 163 (419)
Q Consensus 107 ~~~~~~~~i~iwd~~~~~~~~~~~-~------------~~~~~~~~~~~~~-~~l~~~~~~~~~g~v~i~d 163 (419)
.+...+ .|...+-.......+.. . ...+.++.+.|+. ..+.++.. +.|+..+
T Consensus 194 vg~~~g-gl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~----~gl~~s~ 259 (394)
T 3b7f_A 194 IGMSSG-GVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH----CGIYRMD 259 (394)
T ss_dssp EEEETB-EEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET----TEEEEEE
T ss_pred EEECCC-CEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC----CeEEEeC
Confidence 555444 34333222222222211 0 1236888998863 56666553 3455544
No 377
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=22.53 E-value=3e+02 Score=22.11 Aligned_cols=246 Identities=10% Similarity=-0.004 Sum_probs=0.0
Q ss_pred eEEEEEcc-CCcceeeeecCCccEeEEEECCCCCEEEEEecCCCeEEEEEcCCCeEEE-eccCCCCeeeEEEccCCCEEE
Q 014755 71 MIQAWSLT-QPEWTCKIDEGLAGIAYARWSPDSRHILTTSDFQLRLTVWSLLNTACVH-VQSPKHASKGVAFTQDGKFAA 148 (419)
Q Consensus 71 ~i~iw~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~ 148 (419)
.|..|--. +......-......|..++.......++. ++ .|+.|-....-.+. -......+..++....-..++
T Consensus 3 ~v~~WG~n~~~~~~~~p~~~~~~i~~ia~G~~h~~~l~---~G-~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs~~l 78 (282)
T 3qhy_B 3 SVVAWGGNNDWGEATVPAEAQSGVDAIAGGYFHGLALK---GG-KVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLAL 78 (282)
T ss_dssp EEEEECSCCTTSTTCCCGGGSSSCCEEEECSSEEEEEE---TT-EEEEEECCSSSTTSCCGGGGSCCCEEEECSSEEEEE
T ss_pred EEEEeCCCCCcCcccCCccccCCCcEEEeCCCeEEEEE---CC-EEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEEEEE
Q ss_pred EEeecCCCCeEEEEeccCCeEEEEEeccccceeeeeECCCCCeEEEEcCCCCceEEEEcC--CCceEEEEeecCCCCcee
Q 014755 149 ICTRRDCKDYINLLSCHTWEIMGVFAVDTLDLADIEWSPDDSAIVIWDSPLEYKVLIYSP--DGRCLLKYQAYESGLGVK 226 (419)
Q Consensus 149 ~~~~~~~~g~v~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~i~~~d~--~~~~~~~~~~~~~~~~v~ 226 (419)
. + |.|+.|-....-.+..-..-...|..++...+....+. ++.|+.|-. .+++-........ |.
T Consensus 79 --~-~---G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~hs~al~-----~G~v~~wG~n~~gqlg~~~~~~~~---i~ 144 (282)
T 3qhy_B 79 --K-D---GEVIAWGGNEDGQTTVPAEARSGVDAIAAGAWASYALK-----DGKVIAWGDDSDGQTTVPAEAQSG---VT 144 (282)
T ss_dssp --E-T---TEEEEEECCTTSTTCCCGGGSSSEEEEEEETTEEEEEE-----TTEEEEEECCTTSTTSCCGGGGSS---EE
T ss_pred --E-C---CEEEEeeCCCCCCCCCCcccCCCeEEEECcCCEEEEEe-----CCeEEEecCCCCCcCCCCccCCCC---eE
Q ss_pred EEEEccCCCeEEEEEecCcEEEEEcCCceeeeeecccccccCCCccceeccCCCcccccceeeeccCccccccccccCCc
Q 014755 227 SISWSPCGQFLAVGSYDQTLRVLNHLTWKTFAEFMHLSTVRGPCFPAVFKEVDEPLQLDMSELCLNDDFIQGNSDATNGH 306 (419)
Q Consensus 227 ~~~~s~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (419)
.++...+...+++ ||.|+.|-......+........-
T Consensus 145 ~i~~G~~~~~~l~---~G~v~~wG~n~~gqlg~p~~~~~~---------------------------------------- 181 (282)
T 3qhy_B 145 ALDGGVYTALAVK---NGGVIAWGDNYFGQTTVPAEAQSG---------------------------------------- 181 (282)
T ss_dssp EEEECSSEEEEEE---TTEEEEEECCTTSTTSCCGGGGSS----------------------------------------
T ss_pred EEEcccCEEEEEE---CCEEEEecCCCCCCCCCceecCCC----------------------------------------
Q ss_pred eEEEEEeccCCCCCCCCCCCCCCCCCCcceEEEEEccCCeEEEEecCCCCceEEEeeccC-CCceeecccCCCeeEEEeC
Q 014755 307 IKVRYEVMEIPISLPFQKPPTDKPNPKQGIGLMSWSSDSQYICTRNDSMPTTLWIWDICR-QEPAAILVQKDPIRAATWD 385 (419)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~~~i~iwd~~~-~~~~~~~~~~~~v~~~~~s 385 (419)
|..++...+...++ .+ |.|+.|-... +++-........|..++-.
T Consensus 182 -----------------------------v~~i~~G~~hs~al---~~--G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G 227 (282)
T 3qhy_B 182 -----------------------------VDDVAGGIFHSLAL---KD--GKVIAWGDNRYKQTTVPTEALSGVSAIASG 227 (282)
T ss_dssp -----------------------------EEEEEECSSEEEEE---ET--TEEEEEECCTTSTTCCCGGGGSSCCEEEEC
T ss_pred -----------------------------eEEEEecCCEEEEE---EC--CeEEEEECCCCCCCCCCcccCCCceEEEcC
Q ss_pred CCCCeEEEEeCCCcEEEeecCCCeEEecC
Q 014755 386 PTCTRLVLCTGSSHLYMWTPSGAYCVSNP 414 (419)
Q Consensus 386 ~~~~~l~s~~~dg~i~vw~~~~~~~~~~~ 414 (419)
..-..+++ ||.|+.|--.....+.+|
T Consensus 228 ~~h~~al~---~g~v~~wG~n~~gq~~v~ 253 (282)
T 3qhy_B 228 EWYSLALK---NGKVIAWGSSRTAPSSVQ 253 (282)
T ss_dssp SSCEEEEE---TTEEEEESTTCCCCGGGS
T ss_pred CCEEEEEE---CCEEEEecCCCCccccCC
No 378
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=21.96 E-value=2.4e+02 Score=25.58 Aligned_cols=52 Identities=17% Similarity=0.080 Sum_probs=31.4
Q ss_pred CCCCceEEEEcC--CC---ceEEEEeecCCCCcee-EEEEccCCCeEEEEEecCcEEE
Q 014755 197 SPLEYKVLIYSP--DG---RCLLKYQAYESGLGVK-SISWSPCGQFLAVGSYDQTLRV 248 (419)
Q Consensus 197 ~~~~~~i~~~d~--~~---~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~d~~i~v 248 (419)
++.+|.|.-..+ .. ..+..+.......+|. .|.+++++.+|++++..+.++|
T Consensus 419 GT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 419 GTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 555676655544 21 1233333333233674 8999999999999887765554
No 379
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=20.09 E-value=2.2e+02 Score=25.55 Aligned_cols=63 Identities=16% Similarity=0.103 Sum_probs=0.0
Q ss_pred CCCCCeEEEEcCCCCceEEEEcC--CCc-------eEEEEeecCCCCceeEEEEccCCCeEEEEEecCcEEE
Q 014755 186 SPDDSAIVIWDSPLEYKVLIYSP--DGR-------CLLKYQAYESGLGVKSISWSPCGQFLAVGSYDQTLRV 248 (419)
Q Consensus 186 ~~~~~~l~~~~~~~~~~i~~~d~--~~~-------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d~~i~v 248 (419)
.+++.+-+++=++.+|.|.-.-. .+. .+..+.......+|..|.++++.++|++++.++.++|
T Consensus 416 ~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 416 AEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp CSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred cCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Done!