Citrus Sinensis ID: 014756

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------42
MVQVRLLHSLPNKNFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASAPARSSAARSLVESAVRAWRRKYPTSKVDDCAVVCLFLDSNSNTNGISTSSTFKMKEQLTSVEGVNIGTEKGDDPSGPASLPRSGTVRTTSDEEIHPEESEDDASKLDDSNTDWSALEGVSRVNTLLTLPRFTPGKDDRKAAGARK
cccccccccccccccccccccEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccccccccccccccccccccccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEccEEEEEEcccccEEEEEEcccccEEEEccccccccccHHHHHHHHccccEEEEEcccccccEEEcccccccccHHHHccccccccccccEEccEEEEEEccccccEEEEEcccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
cccHccccEEEEccccccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEccccEEEEEcccccEEEEEccccccEEEEEEEcccccccHHHHHHHHHcccEEEEcccccccEEEEcccccccHHHHHHHHccHHHHHccEEEcccEEEEEEccccEEEEEEccccEEEccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEccccccccccccccccccHHHcccccccccccccccccccccccccccEEcccccccccHHccccHHcccccccccHHHcccHEHHHHHccccccccccccHHccccc
mvqvrllhslpnknfasradtifcgvfdghgpyghMVAKRvrdslplklsshwevnitsEEVLREISINtagsinsedtsfvsadeeprasadleeteKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGqhlvignvgdsravlgtrdkddSLVAMQLTvdlkpnlpaEAERIRKCKGrvfalhdepevarvwlpnydspglAMARAFGDfclkdfglisvpdisyrrltdkdeFIVLATDGIWDVLSNEEVVEIVASAPARSSAARSLVESAVRAWRrkyptskvddcAVVCLFLdsnsntngistsstFKMKEQLTSVegvnigtekgddpsgpaslprsgtvrttsdeeihpeeseddasklddsntdwsalegvsrvntlltlprftpgkddrkaagark
MVQVRLLHSLPNKNFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINtagsinsedtsfVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLtvdlkpnlpaeAERIRKCKGRVfalhdepevarVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVasaparssaarSLVESAVRAWRrkyptskvddcAVVCLFLDsnsntngistsstfkmkeQLTSVEGVNIgtekgddpsgpaslprsgtvrttsdeeihpeeseddaskldDSNTDWSalegvsrvntlltlprftpgkddrkaagark
MVQVRLLHSLPNKNFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVasaparssaarsLVESAVRAWRRKYPTSKVDDCAVVCLFLDsnsntngistsstFKMKEQLTSVEGVNIGTEKGDDPSGPASLPRSGTVRTTSDEEIHPEESEDDASKLDDSNTDWSALEGVSRVNTLLTLPRFTPGKDDRKAAGARK
***********NKNFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISIN*******************************PEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASA********SLVESAVRAWRRKYPTSKVDDCAVVCLFLD********************************************************************************VSRVNTLLTL*****************
*V**RLLHSLPNKNFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEV************************************KFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASAPARSSAARSLVESAVRAWRRKYPTSKVDDCAVVCLF*********************************************************************************GVSRVNTLLT******************
MVQVRLLHSLPNKNFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSE******************ETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASA*************AVRAWRRKYPTSKVDDCAVVCLFLDSNSNTNGISTSSTFKMKEQLTSVEGVNIGT****************************************SNTDWSALEGVSRVNTLLTLPRFTPG***********
MVQVRLLHSLPNKNFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNI******************************************FPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASAPARSSAARSLVESAVRAWRRKYPTSKVDDCAVVCLFLDS*************************************************************************W**LEGVSRVNTLLTLPRF**************
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MVQVRLLHSLPNKNFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDVLSNEEVVEIVASAPARSSAARSLVESAVRAWRRKYPTSKVDDCAVVCLFLDSNSNTNGISTSSTFKMKEQLTSVEGVNIGTEKGDDPSGPASLPRSGTVRTTSDEEIHPEESEDDASKLDDSNTDWSALEGVSRVNTLLTLPRFTPGKDDRKAAGARK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query419 2.2.26 [Sep-21-2011]
Q9M8R7492 Probable protein phosphat yes no 0.935 0.796 0.707 1e-153
Q9FG61448 Probable protein phosphat no no 0.861 0.805 0.590 1e-128
Q9SA22491 Probable protein phosphat no no 0.923 0.788 0.557 1e-125
Q8RXZ4504 Probable protein phosphat no no 0.928 0.771 0.537 1e-120
Q6ZKL8531 Probable protein phosphat yes no 0.923 0.728 0.530 1e-118
Q2R637432 Probable protein phosphat no no 0.854 0.828 0.541 1e-111
Q6K6N7518 Probable protein phosphat no no 0.737 0.596 0.614 1e-108
Q7XW27460 Probable protein phosphat no no 0.711 0.647 0.613 1e-107
Q8GY60468 Probable protein phosphat no no 0.859 0.769 0.509 1e-107
Q9LR65462 Probable protein phosphat no no 0.887 0.805 0.518 1e-106
>sp|Q9M8R7|P2C33_ARATH Probable protein phosphatase 2C 33 OS=Arabidopsis thaliana GN=PPC6-1 PE=1 SV=1 Back     alignment and function desciption
 Score =  541 bits (1393), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 292/413 (70%), Positives = 337/413 (81%), Gaps = 21/413 (5%)

Query: 13  KNFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAG 72
           +NF SR DTIFCGVFDGHGPYGHMVAKRVRD+LPLKLS++WE  +  E VL+ I+ +T  
Sbjct: 85  ENFGSRTDTIFCGVFDGHGPYGHMVAKRVRDNLPLKLSAYWEAKVPVEGVLKAITTDTVN 144

Query: 73  SINS----EDTS----FVSADEEPRASADLEE--TEKFPEFFQTLKESFLKAFKVMDREL 122
           ++ +    ED +    FV+A+EEPR SAD+EE  TE  PE FQTLKESFLKAFKVMDREL
Sbjct: 145 NVTNINNPEDAAAAAAFVTAEEEPRTSADMEEENTETQPELFQTLKESFLKAFKVMDREL 204

Query: 123 RMHATIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLP 182
           + H ++DCFCSGTTAVTLIKQGQ+LV+GNVGDSRAV+GTRD +++LVA+QLTVDLKPNLP
Sbjct: 205 KFHGSVDCFCSGTTAVTLIKQGQYLVVGNVGDSRAVMGTRDSENTLVAVQLTVDLKPNLP 264

Query: 183 AEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYR 242
           AEAERIRKC+GRVFAL DEPEV RVWLPN DSPGLAMARAFGDFCLKDFGLISVPD+S+R
Sbjct: 265 AEAERIRKCRGRVFALRDEPEVCRVWLPNCDSPGLAMARAFGDFCLKDFGLISVPDVSFR 324

Query: 243 RLTDKDEFIVLATDGIWDVLSNEEVVEIVASAPARSSAARSLVESAVRAWRRKYPTSKVD 302
           +LT+KDEFIVLATDGIWDVLSNE+VV IVASAP+RSSAAR+LVESAVRAWR KYPTSKVD
Sbjct: 325 QLTEKDEFIVLATDGIWDVLSNEDVVAIVASAPSRSSAARALVESAVRAWRYKYPTSKVD 384

Query: 303 DCAVVCLFLDSNSNTNGISTSSTFKMKEQLTSVEGVNIGTEKGDDPSGPASLPRSGTVRT 362
           DCA VCL+LDS SNTN IST+S+    E     E     T + DD SGP+ L RS TVR 
Sbjct: 385 DCAAVCLYLDS-SNTNAISTASSISKLEDGEEEE--LKATTEDDDASGPSGLGRSSTVR- 440

Query: 363 TSDEEIHPEESE-----DDASKLD-DSNTDWSALEGVSRVNTLLTLPRFTPGK 409
            S +EI  +ESE      +A  LD +  T++SALEGV+RVNTLL LPRF PGK
Sbjct: 441 -SGKEIALDESETEKLIKEADNLDSEPGTEYSALEGVARVNTLLNLPRFVPGK 492

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q9FG61|P2C74_ARATH Probable protein phosphatase 2C 74 OS=Arabidopsis thaliana GN=At5g36250 PE=2 SV=1 Back     alignment and function description
>sp|Q9SA22|P2C06_ARATH Probable protein phosphatase 2C 6 OS=Arabidopsis thaliana GN=At1g16220 PE=2 SV=1 Back     alignment and function description
>sp|Q8RXZ4|P2C18_ARATH Probable protein phosphatase 2C 18 OS=Arabidopsis thaliana GN=At1g79630 PE=2 SV=1 Back     alignment and function description
>sp|Q6ZKL8|P2C66_ORYSJ Probable protein phosphatase 2C 66 OS=Oryza sativa subsp. japonica GN=Os08g0500300 PE=2 SV=1 Back     alignment and function description
>sp|Q2R637|P2C75_ORYSJ Probable protein phosphatase 2C 75 OS=Oryza sativa subsp. japonica GN=Os11g0417400 PE=2 SV=1 Back     alignment and function description
>sp|Q6K6N7|P2C14_ORYSJ Probable protein phosphatase 2C 14 OS=Oryza sativa subsp. japonica GN=Os02g0471500 PE=2 SV=1 Back     alignment and function description
>sp|Q7XW27|P2C38_ORYSJ Probable protein phosphatase 2C 38 OS=Oryza sativa subsp. japonica GN=Os04g0321800 PE=2 SV=2 Back     alignment and function description
>sp|Q8GY60|P2C52_ARATH Probable protein phosphatase 2C 52 OS=Arabidopsis thaliana GN=At4g03415 PE=2 SV=1 Back     alignment and function description
>sp|Q9LR65|P2C01_ARATH Probable protein phosphatase 2C 1 OS=Arabidopsis thaliana GN=PPC6-6 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query419
255547560499 protein phosphatase-2c, putative [Ricinu 0.968 0.813 0.767 0.0
224144954493 predicted protein [Populus trichocarpa] 0.959 0.815 0.756 1e-180
225430932486 PREDICTED: probable protein phosphatase 0.945 0.814 0.781 1e-176
224128904482 predicted protein [Populus trichocarpa] 0.933 0.811 0.746 1e-169
297735253461 unnamed protein product [Vitis vinifera] 0.894 0.813 0.759 1e-167
356531890489 PREDICTED: probable protein phosphatase 0.959 0.822 0.718 1e-162
357507795502 Protein phosphatase 2c [Medicago truncat 0.961 0.802 0.708 1e-160
356568499487 PREDICTED: probable protein phosphatase 0.957 0.823 0.718 1e-160
56117813502 protein phosphatase 2c [Medicago sativa] 0.961 0.802 0.706 1e-158
449442279484 PREDICTED: probable protein phosphatase 0.947 0.820 0.726 1e-158
>gi|255547560|ref|XP_002514837.1| protein phosphatase-2c, putative [Ricinus communis] gi|223545888|gb|EEF47391.1| protein phosphatase-2c, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  641 bits (1653), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/413 (76%), Positives = 356/413 (86%), Gaps = 7/413 (1%)

Query: 13  KNFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAG 72
           +NF SR DT+FCGVFDGHGPYGHMVAKRVRD LPLKLS+HWEVNITSE+VL+EIS+NTAG
Sbjct: 85  ENFGSRTDTVFCGVFDGHGPYGHMVAKRVRDHLPLKLSAHWEVNITSEDVLKEISLNTAG 144

Query: 73  SINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFC 132
           S+NSEDT+FVSADEE RAS DL++T K PE FQTLKESFLKAFKVMDRELR+HA IDCFC
Sbjct: 145 SMNSEDTTFVSADEESRASVDLDDTVKHPEIFQTLKESFLKAFKVMDRELRIHANIDCFC 204

Query: 133 SGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCK 192
           SGTTAVTLIKQG++LV+GNVGDSRAVLGTRDKDDSLVA+QLTVDLKPNLPAEAERIRKCK
Sbjct: 205 SGTTAVTLIKQGRNLVVGNVGDSRAVLGTRDKDDSLVAVQLTVDLKPNLPAEAERIRKCK 264

Query: 193 GRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIV 252
           GRVFAL DEPEVARVWLPN DSPGLAMARAFGDFCLKDFGLISVPD+S+RRL++KDEFIV
Sbjct: 265 GRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDVSFRRLSEKDEFIV 324

Query: 253 LATDGIWDVLSNEEVVEIVASAPARSSAARSLVESAVRAWRRKYPTSKVDDCAVVCLFLD 312
           LATDGIWDVLSN+EVV+IVAS P R SAAR+LVESAVRAWR KYPTSKVDDCAVVCLFLD
Sbjct: 325 LATDGIWDVLSNKEVVDIVASVPTRPSAARALVESAVRAWRYKYPTSKVDDCAVVCLFLD 384

Query: 313 SN--SNTNGISTSSTFKMKEQLTSVEGVNIGTEKGDDPSGPASLPRSGTVRTTSDEEIHP 370
           SN  S  + ++ +S    KEQ TS +  ++ ++K DD +GP  L RSGTVR    E +  
Sbjct: 385 SNNVSTASTVNANSNINTKEQPTSEDQADVDSQKEDDLNGPTGLGRSGTVR-NGKEVLSD 443

Query: 371 EESEDDASKLDDSNT----DWSALEGVSRVNTLLTLPRFTPGKDDRKAAGARK 419
              E+D SK D+  +    +WSALEGVSRVNTLL LPRF PGK+D+KAAG  K
Sbjct: 444 GIGEEDNSKQDEMQSEYGIEWSALEGVSRVNTLLNLPRFVPGKEDKKAAGETK 496

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224144954|ref|XP_002325473.1| predicted protein [Populus trichocarpa] gi|118486776|gb|ABK95223.1| unknown [Populus trichocarpa] gi|222862348|gb|EEE99854.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225430932|ref|XP_002277393.1| PREDICTED: probable protein phosphatase 2C 33 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224128904|ref|XP_002328995.1| predicted protein [Populus trichocarpa] gi|222839229|gb|EEE77580.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297735253|emb|CBI17615.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356531890|ref|XP_003534509.1| PREDICTED: probable protein phosphatase 2C 33-like [Glycine max] Back     alignment and taxonomy information
>gi|357507795|ref|XP_003624186.1| Protein phosphatase 2c [Medicago truncatula] gi|149350003|gb|ABR24134.1| protein phosphatase 2c [Medicago truncatula] gi|355499201|gb|AES80404.1| Protein phosphatase 2c [Medicago truncatula] Back     alignment and taxonomy information
>gi|356568499|ref|XP_003552448.1| PREDICTED: probable protein phosphatase 2C 33-like [Glycine max] Back     alignment and taxonomy information
>gi|56117813|gb|AAV73837.1| protein phosphatase 2c [Medicago sativa] Back     alignment and taxonomy information
>gi|449442279|ref|XP_004138909.1| PREDICTED: probable protein phosphatase 2C 33-like [Cucumis sativus] gi|449506270|ref|XP_004162700.1| PREDICTED: probable protein phosphatase 2C 33-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query419
TAIR|locus:2183612448 PP2C74 "AT5G36250" [Arabidopsi 0.801 0.75 0.605 7e-113
TAIR|locus:2032880491 AT1G16220 [Arabidopsis thalian 0.923 0.788 0.533 1.7e-107
TAIR|locus:2019868504 AT1G79630 [Arabidopsis thalian 0.930 0.773 0.514 1.2e-104
TAIR|locus:2020863462 AT1G03590 [Arabidopsis thalian 0.878 0.796 0.507 5.8e-98
TAIR|locus:504955459468 PP2C52 "AT4G03415" [Arabidopsi 0.887 0.794 0.498 3.2e-97
TAIR|locus:2143325373 AT5G27930 [Arabidopsis thalian 0.522 0.587 0.534 5.2e-75
TAIR|locus:2078117358 AT3G05640 [Arabidopsis thalian 0.563 0.659 0.512 5.3e-73
TAIR|locus:2086755351 AT3G16800 [Arabidopsis thalian 0.522 0.623 0.513 6e-70
TAIR|locus:2180612331 AT5G26010 [Arabidopsis thalian 0.470 0.595 0.552 9.8e-66
TAIR|locus:2149775382 AT5G01700 [Arabidopsis thalian 0.591 0.649 0.511 2.6e-63
TAIR|locus:2183612 PP2C74 "AT5G36250" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1062 (378.9 bits), Expect = 7.0e-113, Sum P(2) = 7.0e-113
 Identities = 210/347 (60%), Positives = 255/347 (73%)

Query:    13 KNFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAG 72
             +NF S  DT+FCGVFDGHGPYGH+VAKRVRD LPLKL SH E  ++ EEVL+EIS+NT  
Sbjct:    88 ENFGSMEDTVFCGVFDGHGPYGHIVAKRVRDLLPLKLGSHLESYVSPEEVLKEISLNTDD 147

Query:    73 SINSEDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFC 132
                SED   +SA+ E R     ++  K  +  Q L  S +KA++ MD+EL+M   +DCFC
Sbjct:   148 RKISEDLVHISANGESRVYN--KDYVKDQDMIQMLIGSIVKAYRFMDKELKMQVDVDCFC 205

Query:   133 SGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCK 192
             SGTTAVT++KQGQHLVIGN+GDSRAVLG R+KD+ LV  QLT DLKP++PAEAERI++C+
Sbjct:   206 SGTTAVTMVKQGQHLVIGNIGDSRAVLGVRNKDNKLVPFQLTEDLKPDVPAEAERIKRCR 265

Query:   193 GRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIV 252
             GR+FAL DEP VAR+WLPN++SPGLAMARAFGDFCLKDFGLISVPD+SYRRLT+KDEF+V
Sbjct:   266 GRIFALRDEPGVARLWLPNHNSPGLAMARAFGDFCLKDFGLISVPDVSYRRLTEKDEFVV 325

Query:   253 LATDGIWDVLSNEEVVEIVXXXXXXXXXXXXLVESAVRAWRRKYPTSKVDDCAVVCLFLD 312
             LATDGIWD L+NEEVV+IV            LVE+AVR WR K+PTSKVDDCAVVCLFLD
Sbjct:   326 LATDGIWDALTNEEVVKIVAKAPTRSSAGRALVEAAVRNWRWKFPTSKVDDCAVVCLFLD 385

Query:   313 XXXXXXXXXXXXXFKMKEQLTSVEGVNIGTEKGDDPSGPASLPRSGT 359
                             KE+      +N G  + +  +  +S P SGT
Sbjct:   386 SEPNRLSTASFS----KEK-----HINNGVTEPEPDTASSSTPDSGT 423
GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS
GO:0005739 "mitochondrion" evidence=ISM
GO:0005634 "nucleus" evidence=IDA
GO:0004721 "phosphoprotein phosphatase activity" evidence=IDA
GO:0005515 "protein binding" evidence=IPI
GO:0005886 "plasma membrane" evidence=IDA
GO:0006470 "protein dephosphorylation" evidence=IDA
TAIR|locus:2032880 AT1G16220 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2019868 AT1G79630 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020863 AT1G03590 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955459 PP2C52 "AT4G03415" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2143325 AT5G27930 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078117 AT3G05640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086755 AT3G16800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2180612 AT5G26010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149775 AT5G01700 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9M8R7P2C33_ARATH3, ., 1, ., 3, ., 1, 60.70700.93550.7967yesno
Q6ZKL8P2C66_ORYSJ3, ., 1, ., 3, ., 1, 60.53060.92360.7288yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.16LOW CONFIDENCE prediction!
3rd Layer3.1.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.XIX.1493.1
SubName- Full=Putative uncharacterized protein; (480 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query419
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 6e-64
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 9e-52
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 2e-39
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 3e-22
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 2e-17
PTZ00224381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 3e-16
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  205 bits (524), Expect = 6e-64
 Identities = 98/297 (32%), Positives = 131/297 (44%), Gaps = 76/297 (25%)

Query: 20  DTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSEDT 79
           D    GVFDGHG  GH   +     L              EE+L E+             
Sbjct: 29  DGGLFGVFDGHG--GHAAGEFASKLLV-------------EELLEELE------------ 61

Query: 80  SFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHAT--IDCFCSGTTA 137
                             E      + ++E+  KAF   D E+   A    D   SGTTA
Sbjct: 62  ------------------ETLTLSEEDIEEALRKAFLRADEEILEEAQDEPDDARSGTTA 103

Query: 138 VTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFA 197
           V  + +G  L + NVGDSRAVL    +     A+QLT D KP    E ERI K  GRV  
Sbjct: 104 VVALIRGNKLYVANVGDSRAVLCRNGE-----AVQLTKDHKPVNEEERERIEKAGGRVS- 157

Query: 198 LHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDG 257
                              LA+ RA GDF LK  G+ + PD++  +LT+ D+F++LA+DG
Sbjct: 158 ------------NGRVPGVLAVTRALGDFDLK-PGVSAEPDVTVVKLTEDDDFLILASDG 204

Query: 258 IWDVLSNEEVVEIVASAPARSS---AARSLVESAVRAWRRKYPTSKVDDCAVVCLFL 311
           +WDVLSN+E V+IV S  A+     AA+ LV+ A+R           D+  VV + L
Sbjct: 205 LWDVLSNQEAVDIVRSELAKEDLQEAAQELVDLALRRGSH-------DNITVVVVRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 419
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PLN03145365 Protein phosphatase 2c; Provisional 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
PTZ00224381 protein phosphatase 2C; Provisional 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.97
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.92
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.84
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.71
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.71
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.42
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.38
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.13
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=9.9e-46  Score=367.00  Aligned_cols=241  Identities=38%  Similarity=0.561  Sum_probs=207.8

Q ss_pred             cccCCCCCCCeEEEEEEeCCCcChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhhcccCCcCCccccccccCCcccc
Q 014756           11 PNKNFASRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSEDTSFVSADEEPRA   90 (419)
Q Consensus        11 ~~~~f~~~~~~~l~gVfDGhG~~G~~aA~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~d~~~~~   90 (419)
                      .+..+.......|||||||||  |+.||+|+.++|+..+.+++......                               
T Consensus        65 ~~~~~~~~~~~~ffgVfDGHG--G~~~A~~~~~~L~~~l~~~~~~~~~~-------------------------------  111 (330)
T KOG0698|consen   65 LEEDVGGEQDTAFFGVFDGHG--GDLAAKFAAKHLHKNLLEQLAFPKDR-------------------------------  111 (330)
T ss_pred             cccccCCCCceEEEEEEeCCC--CHHHHHHHHHHHHHHHHhhhhcccch-------------------------------
Confidence            344555555799999999999  99999999999999998875442210                               


Q ss_pred             ccchhhhccchhHHHHHHHHHHHHHH-HHHHHHhhhhcCCCCCCcceEEEEEEEC-CEEEEEEeccccEEEEEecCCCce
Q 014756           91 SADLEETEKFPEFFQTLKESFLKAFK-VMDRELRMHATIDCFCSGTTAVTLIKQG-QHLVIGNVGDSRAVLGTRDKDDSL  168 (419)
Q Consensus        91 ~~~~~~~~~~~~~~~~l~~al~~a~~-~~~~~l~~~~~~~~~~~GTTavv~li~~-~~l~ianVGDSRayl~r~~~d~~~  168 (419)
                                    ..++.++.++|. .++..+... ..+...+|||++++++.+ .+|||||+|||||+|+++++    
T Consensus       112 --------------~~~~~a~~~~F~~~~D~~~~~~-~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~----  172 (330)
T KOG0698|consen  112 --------------QDVKDALRRAFLTKTDSEFLEK-REDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGG----  172 (330)
T ss_pred             --------------HHHHHHHHHHHHHHHHHHHHhh-ccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCC----
Confidence                          346788999999 599988865 222456788888887775 49999999999999998753    


Q ss_pred             EEEEeccCCCCCCHHHHHHHHHcCCeEEeccCCCcceeeeccCCCCCceeeeccCCCcccccCCceecceEEEEEcCCCC
Q 014756          169 VAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKD  248 (419)
Q Consensus       169 ~~~~LT~DH~~~~~~E~~Ri~~~gg~v~~~~~~~~~~rv~~~~~~~~gl~ltRalGd~~~K~~gv~~~Pdv~~~~L~~~D  248 (419)
                      ++++||.||+|..+.|+.||+.+||+|.....   ++||      .|+|+++|+|||+.+|.++++++|++....+...|
T Consensus       173 ~a~~Ls~DHkP~~~~E~~RI~~~GG~v~~~~~---~~Rv------~G~LavsRa~GD~~~k~~~v~a~Pei~~~~~~~~d  243 (330)
T KOG0698|consen  173 VAVQLSVDHKPDREDERERIEAAGGRVSNWGG---VWRV------NGVLAVSRAFGDVELKSQGVIAEPEIQQVKINSDD  243 (330)
T ss_pred             eeeeCCCCCCCCcHHHHHHHHHcCCEEEEcCC---cceE------eceEEEeeecCCHHhcCCcEecCCceEEEEcCCCC
Confidence            59999999999999999999999999987544   5677      67999999999999998889999999999999999


Q ss_pred             eEEEEEcCCccCCCChHHHHHHHHc----CCCHHHHHHHHHHHHHHhchhcCCCCCCCcEEEEEEEecCCCCCCC
Q 014756          249 EFIVLATDGIWDVLSNEEVVEIVAS----APARSSAARSLVESAVRAWRRKYPTSKVDDCAVVCLFLDSNSNTNG  319 (419)
Q Consensus       249 ~fLVLaSDGlwd~ls~~ei~~iv~~----~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~l~~~~~~~~  319 (419)
                      +||||+||||||+|+++|++++|+.    ...+..+++.|.+.|..+       ++.||||||||+|.+......
T Consensus       244 eFLiLasDGiwDv~s~qeav~~V~~~~~~~~~~~~a~~~l~~~a~~~-------~s~DnitvvvV~l~~~~~~~~  311 (330)
T KOG0698|consen  244 EFLILASDGIWDVVSNQEAVDLVRDELASISSPLAAAKLLATEALSR-------GSKDNITVVVVRLKSSPKSPS  311 (330)
T ss_pred             cEEEEeCCchhcccChHHHHHHHHHHhhccccHHHHHHHHHHHHhhc-------CCCCCeEEEEEEecCcccccc
Confidence            9999999999999999999999998    568899999999999999       999999999999998876533

>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query419
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 3e-18
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 3e-18
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 3e-18
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 3e-18
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 3e-18
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 5e-18
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 3e-17
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 5e-17
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 4e-16
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 7e-16
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 7e-16
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 2e-15
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 4e-15
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 3e-14
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 5e-14
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 3e-13
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 3e-13
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 4e-12
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 9e-12
2isn_A364 Crystal Structure Of A Phosphatase From A Pathogeni 7e-05
2irm_A358 Crystal Structure Of Mitogen-Activated Protein Kina 6e-04
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure 
Iteration: 1

 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 121/249 (48%), Gaps = 41/249 (16%)
Query: 23  FCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTA-GSINSEDTSF 81
           F GV+DGHG  GH VA   RD L   L+   E+    +E+ +    NT  G     D  F
Sbjct: 53  FFGVYDGHG--GHKVADYCRDRLHFALAE--EIERIKDELCKR---NTGEGRQVQWDKVF 105
Query: 82  VSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHATIDCFCSGTTAVTLI 141
            S       + D E   K         +  L+A             +     G+TAV  +
Sbjct: 106 TSC----FLTVDGEIEGKIGRAVVGSSDKVLEA-------------VASETVGSTAVVAL 148
Query: 142 KQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDE 201
               H+V+ N GDSRAVL  R K+    AM L+VD KP+   E  RI    G+V     +
Sbjct: 149 VCSSHIVVSNCGDSRAVL-FRGKE----AMPLSVDHKPDREDEYARIENAGGKVI----Q 199
Query: 202 PEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDISYRRLTDKDEFIVLATDGIWDV 261
            + ARV+        LAM+R+ GD  LK + +I  P++++   + +DE ++LA+DG+WDV
Sbjct: 200 WQGARVF------GVLAMSRSIGDRYLKPY-VIPEPEVTFMPRSREDECLILASDGLWDV 252
Query: 262 LSNEEVVEI 270
           ++N+EV EI
Sbjct: 253 MNNQEVCEI 261
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic Strain Toxoplasma Gondii Length = 364 Back     alignment and structure
>pdb|2IRM|A Chain A, Crystal Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 7 Interacting Protein 1 From Anopheles Gambiae Length = 358 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query419
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 2e-97
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 1e-66
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 7e-60
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 3e-57
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 9e-56
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 5e-55
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 2e-54
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 9e-51
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 5e-50
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 6e-50
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 7e-50
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 2e-42
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 8e-38
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-12
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 1e-10
1txo_A237 Putative bacterial enzyme; serine/threonine protei 4e-10
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 2e-09
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 1e-08
3rnr_A211 Stage II sporulation E family protein; structural 5e-07
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
 Score =  293 bits (751), Expect = 2e-97
 Identities = 78/305 (25%), Positives = 133/305 (43%), Gaps = 43/305 (14%)

Query: 17  SRADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINS 76
            R D  F GVFDG    G   ++ V+D +  +L S                         
Sbjct: 49  GRDDCAFFGVFDGTV--GDFASENVKDLVVPQLISSPA---------------------- 84

Query: 77  EDTSFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRE-LRMHATIDCFCSGT 135
                   +      +D+  TE   +  Q L ++    +K  D E ++M   ++   + +
Sbjct: 85  ------WQEVTEMLRSDVPATEVDEKLPQLLDQAVDDMYKNADNELVKMCEQLNKDYASS 138

Query: 136 TAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRV 195
           T+VT +     + +G++GDSR  +G     + L    LTVD KP++P E  RI +  G V
Sbjct: 139 TSVTAVLAKGFVAVGHLGDSRIAMGVET-PNGLNCEFLTVDHKPDMPHEKLRIMRNGGSV 197

Query: 196 FALHDEPEVARVWLPNYD--------SPGLAMARAFGDFCLKDFGLISVPDISYRRLTDK 247
             LH+      +   ++            L  +RAFG   LK +GL + PD+   R+T +
Sbjct: 198 EYLHNHNNKPFIRGGDFSFRKSRGEQPMQLQYSRAFGGKDLKMYGLSNQPDVRVVRVTPQ 257

Query: 248 DEFIVLATDGIWDVLSNEEVVEIVASAPAR-SSAARSLVESAVRAWRRKYPTSKVDDCAV 306
              ++LATDG+WDV+S  + VEI   A     + A++LVE  +   + +  ++  D+   
Sbjct: 258 HRVMILATDGLWDVMSAAQAVEIAMQARQEGRNPAQALVEMTLAEQQSRNQSA--DNITA 315

Query: 307 VCLFL 311
           + +F 
Sbjct: 316 MTVFF 320
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query419
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.79
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.77
3f79_A255 Probable two-component response regulator; adaptor 99.62
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.55
3ke6_A399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.07
3eq2_A394 Probable two-component response regulator; adaptor 98.2
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=3.3e-43  Score=339.43  Aligned_cols=238  Identities=30%  Similarity=0.449  Sum_probs=195.2

Q ss_pred             eeccccCCCC---CCCeEEEEEEeCCCcChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhhcccCCcCCcccccccc
Q 014756            8 HSLPNKNFAS---RADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSEDTSFVSA   84 (419)
Q Consensus         8 ~~~~~~~f~~---~~~~~l~gVfDGhG~~G~~aA~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~   84 (419)
                      |..++|.|..   .++..||+||||||  |+.+|+++++.+...|...+...                            
T Consensus        19 R~~nED~~~~~~~~~~~~l~~V~DG~G--G~~~a~~as~~~~~~l~~~~~~~----------------------------   68 (274)
T 2iq1_A           19 RKENEDRFDFAQLTDEVLYFAVYDGHG--GPAAADFCHTHMEKCIMDLLPKE----------------------------   68 (274)
T ss_dssp             SSSCCEEEEEEECSSSEEEEEEEEEES--STHHHHHHHHHHHHHHHHHTTTC----------------------------
T ss_pred             CCCccceEEEeeCCCCeEEEEEECCCC--CHHHHHHHHHHHHHHHHHHhccc----------------------------
Confidence            3445554432   35789999999999  99999999999988876553210                            


Q ss_pred             CCccccccchhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhc----CCCCCCcceEEEEEEEC-CEEEEEEeccccEEE
Q 014756           85 DEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHAT----IDCFCSGTTAVTLIKQG-QHLVIGNVGDSRAVL  159 (419)
Q Consensus        85 d~~~~~~~~~~~~~~~~~~~~~l~~al~~a~~~~~~~l~~~~~----~~~~~~GTTavv~li~~-~~l~ianVGDSRayl  159 (419)
                                          ..+.++|.++|..+++.+.....    .....+|||++++++.+ .++|++||||||+|+
T Consensus        69 --------------------~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~~~GtT~~~~~i~~~~~l~~anvGDSR~~l  128 (274)
T 2iq1_A           69 --------------------KNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAIL  128 (274)
T ss_dssp             --------------------CCHHHHHHHHHHHHHHHHHHHHHC---CCGGGCEECEEEEEEETTTEEEEEEESSCEEEE
T ss_pred             --------------------ccHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCcEEEEEEECCCEEEEEEecCceEEE
Confidence                                01335666777777777665432    23457899999999975 699999999999999


Q ss_pred             EEecCCCceEEEEeccCCCCCCHHHHHHHHHcCCeEEeccCCCcceeeeccCCCCCceeeeccCCCcccccCCceecceE
Q 014756          160 GTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFGLISVPDI  239 (419)
Q Consensus       160 ~r~~~d~~~~~~~LT~DH~~~~~~E~~Ri~~~gg~v~~~~~~~~~~rv~~~~~~~~gl~ltRalGd~~~K~~gv~~~Pdv  239 (419)
                      +++++     +++||.||++..+.|+.||+.++|.+..-  +.+..|+      .+.+++|||||+..+|+++++++|++
T Consensus       129 ~r~g~-----~~~lT~DH~~~~~~E~~Ri~~~gG~v~~~--~~~~~~~------~~~~~ltralGd~~~k~~~v~~~pdi  195 (274)
T 2iq1_A          129 CRKGK-----PMKLTIDHTPERKDEKERIKKCGGFVAWN--SLGQPHV------NGRLAMTRSIGDLDLKTSGVIAEPET  195 (274)
T ss_dssp             EETTE-----EEECCCCCCTTSHHHHHHHHHTTCCEEEC--TTSCEEE------TTTBSCSBCEECGGGTTTTCBCCCEE
T ss_pred             EeCCE-----eeECCCCCCCcCHHHHHHHHHcCCEEEcC--CCCceeE------CCeEeeccccCChhhccCCEEeCCEE
Confidence            99775     99999999999999999999999988641  1112233      56789999999999999999999999


Q ss_pred             EEEEcCCC-CeEEEEEcCCccCCCChHHHHHHHHcCCCHHHHHHHHHHHHHHhchhcCCCCCCCcEEEEEEEecCCC
Q 014756          240 SYRRLTDK-DEFIVLATDGIWDVLSNEEVVEIVASAPARSSAARSLVESAVRAWRRKYPTSKVDDCAVVCLFLDSNS  315 (419)
Q Consensus       240 ~~~~L~~~-D~fLVLaSDGlwd~ls~~ei~~iv~~~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~l~~~~  315 (419)
                      ..++|.++ |+|||||||||||+|+++|+++++....+++++|+.|++.|+.+       |+.||+||||++|....
T Consensus       196 ~~~~l~~g~d~~lll~SDGl~d~l~~~ei~~~~~~~~~~~~~a~~L~~~A~~~-------g~~DNiTvivv~~~~~~  265 (274)
T 2iq1_A          196 KRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQY-------GTEDNSTAVVVPFGAWG  265 (274)
T ss_dssp             EEEECCTTTEEEEEEECHHHHTTCCHHHHHHHHHTSSSHHHHHHHHHHHHHHT-------TCCSCEEEEEEECTTC-
T ss_pred             EEEEeCCCCCcEEEEEccCcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHc-------CCCCCeEEEEEEccCCC
Confidence            99999986 56999999999999999999999999889999999999999998       99999999999998643
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 419
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 4e-26
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 1e-10
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (261), Expect = 4e-26
 Identities = 67/309 (21%), Positives = 112/309 (36%), Gaps = 82/309 (26%)

Query: 20  DTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSEDT 79
              F  V+DGH   G  VAK   + L   ++++ +   ++                    
Sbjct: 51  SWSFFAVYDGHA--GSQVAKYCCEHLLDHITNNQDFKGSAGA------------------ 90

Query: 80  SFVSADEEPRASADLEETEKFPEFFQTLKESFLKAFKVMDRELRMHA--TIDCFCSGTTA 137
                                    + +K      F  +D  +R+ +        SG+TA
Sbjct: 91  ----------------------PSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTA 128

Query: 138 VTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVDLKPNLPAEAERIRKCKGRVFA 197
           V ++   QH    N GDSR +L    K         T D KP+ P E ERI+   G    
Sbjct: 129 VGVLISPQHTYFINCGDSRGLLCRNRKV-----HFFTQDHKPSNPLEKERIQNAGGS--- 180

Query: 198 LHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFG--------LISVPDISYRRLT-DKD 248
                      +    +  LA++RA GDF  K           +   P++     + + D
Sbjct: 181 ----------VMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDD 230

Query: 249 EFIVLATDGIWDVLSNEEVVEIVASAPARSS----AARSLVESAVRAWRRKYPTSKVDDC 304
           +FI+LA DGIWDV+ NEE+ + V S    +         +V++ +    R       D+ 
Sbjct: 231 QFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSR-------DNM 283

Query: 305 AVVCLFLDS 313
           +V+ +   +
Sbjct: 284 SVILICFPN 292
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query419
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-46  Score=362.06  Aligned_cols=230  Identities=30%  Similarity=0.454  Sum_probs=195.9

Q ss_pred             CCeEEEEEEeCCCcChHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHhhhcccCCcCCccccccccCCccccccchhhhc
Q 014756           19 ADTIFCGVFDGHGPYGHMVAKRVRDSLPLKLSSHWEVNITSEEVLREISINTAGSINSEDTSFVSADEEPRASADLEETE   98 (419)
Q Consensus        19 ~~~~l~gVfDGhG~~G~~aA~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~d~~~~~~~~~~~~~   98 (419)
                      ++..|||||||||  |+.||+++++.|+..|.+.+......                                       
T Consensus        50 ~~~~lf~V~DGhG--G~~~s~~~~~~l~~~l~~~~~~~~~~---------------------------------------   88 (295)
T d1a6qa2          50 ESWSFFAVYDGHA--GSQVAKYCCEHLLDHITNNQDFKGSA---------------------------------------   88 (295)
T ss_dssp             EEEEEEEEEEEES--CSHHHHHHHHHHHHHHHTSHHHHCSS---------------------------------------
T ss_pred             CceEEEEEEeCCC--ChHHHHHHHHHHHHHHHHhhhhcccc---------------------------------------
Confidence            5678999999999  99999999999999998765432211                                       


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhhhh--cCCCCCCcceEEEEEEECCEEEEEEeccccEEEEEecCCCceEEEEeccC
Q 014756           99 KFPEFFQTLKESFLKAFKVMDRELRMHA--TIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDSLVAMQLTVD  176 (419)
Q Consensus        99 ~~~~~~~~l~~al~~a~~~~~~~l~~~~--~~~~~~~GTTavv~li~~~~l~ianVGDSRayl~r~~~d~~~~~~~LT~D  176 (419)
                       .......+.++|.++|..+++.+....  ......+|||++++++.++++|+|||||||+|+++++.     +++||.|
T Consensus        89 -~~~~~~~~~~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~~-----~~~lT~d  162 (295)
T d1a6qa2          89 -GAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRK-----VHFFTQD  162 (295)
T ss_dssp             -SSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTE-----EEEECCC
T ss_pred             -ccchHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeeccc-----ceeeccc
Confidence             112334567888888888888775443  23456799999999999999999999999999999775     9999999


Q ss_pred             CCCCCHHHHHHHHHcCCeEEeccCCCcceeeeccCCCCCceeeeccCCCcccccCC--------ceecceEEEEEcC-CC
Q 014756          177 LKPNLPAEAERIRKCKGRVFALHDEPEVARVWLPNYDSPGLAMARAFGDFCLKDFG--------LISVPDISYRRLT-DK  247 (419)
Q Consensus       177 H~~~~~~E~~Ri~~~gg~v~~~~~~~~~~rv~~~~~~~~gl~ltRalGd~~~K~~g--------v~~~Pdv~~~~L~-~~  247 (419)
                      |+|..+.|+.||...||.+..       .|+      .+.|++||||||+.+|..+        ++++|++..+.+. ++
T Consensus       163 H~~~~~~E~~Ri~~~gg~v~~-------~r~------~g~l~~tRa~Gd~~~k~~~~~~~~~~~v~~~Pdi~~~~~~~~~  229 (295)
T d1a6qa2         163 HKPSNPLEKERIQNAGGSVMI-------QRV------NGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEED  229 (295)
T ss_dssp             CCTTSHHHHHHHHHTTCCEET-------TEE------TTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTT
T ss_pred             cCcccHHHHhhHhhcCCcccc-------ccc------CCceeeeeccCcHHhhhccccCcccccccccccceEEEeeccc
Confidence            999999999999999998753       233      7889999999999998654        8999999999886 56


Q ss_pred             CeEEEEEcCCccCCCChHHHHHHHHc----CCCHHHHHHHHHHHHHHhchhcCCCCCCCcEEEEEEEecCCC
Q 014756          248 DEFIVLATDGIWDVLSNEEVVEIVAS----APARSSAARSLVESAVRAWRRKYPTSKVDDCAVVCLFLDSNS  315 (419)
Q Consensus       248 D~fLVLaSDGlwd~ls~~ei~~iv~~----~~~~~~aA~~Lv~~A~~~w~~~~~~g~~DNiTvIvv~l~~~~  315 (419)
                      |+|||||||||||+|+++|+++++..    ..+++.+|+.|++.|+++       ++.||||||||+|+..+
T Consensus       230 ~~flvL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~~-------gs~DNiTvivv~~~~~~  294 (295)
T d1a6qa2         230 DQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYK-------GSRDNMSVILICFPNAP  294 (295)
T ss_dssp             EEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHT-------TCCSCEEEEEEECTTSC
T ss_pred             ceeEeeecCcccccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHhc-------CCCCCeEEEEEeccCCC
Confidence            67999999999999999999999865    368999999999999999       89999999999998654
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure