Query         014765
Match_columns 419
No_of_seqs    291 out of 1685
Neff          7.5 
Searched_HMMs 29240
Date          Mon Mar 25 17:25:45 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014765.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014765hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 2p8e_A PPM1B beta isoform vari 100.0 4.7E-48 1.6E-52  379.5  22.5  269   24-345     3-301 (307)
  2 2i0o_A Ser/Thr phosphatase; be 100.0 5.8E-48   2E-52  378.3  22.1  270   24-342     2-304 (304)
  3 2iq1_A Protein phosphatase 2C  100.0 3.5E-46 1.2E-50  360.3  24.0  252   51-348     9-268 (274)
  4 1a6q_A Phosphatase 2C; catalyt 100.0 1.6E-46 5.3E-51  379.1  19.8  271   24-347     1-297 (382)
  5 2i44_A Serine-threonine phosph 100.0 7.6E-46 2.6E-50  366.1  23.5  261   48-343    20-322 (324)
  6 3qn1_B Protein phosphatase 2C  100.0   6E-46   2E-50  369.2  22.2  252   51-346    15-332 (337)
  7 2isn_A NYSGXRC-8828Z, phosphat 100.0 1.3E-45 4.6E-50  370.1  24.2  251   47-345    10-336 (364)
  8 3kdj_B Protein phosphatase 2C  100.0 1.5E-45   5E-50  363.2  22.2  254   49-348     8-311 (316)
  9 2j4o_A Mitogen-activated prote 100.0 1.8E-45 6.1E-50  373.7  18.0  282   29-344     5-368 (401)
 10 4da1_A Protein phosphatase 1K, 100.0 1.8E-44   6E-49  365.2  22.8  253   50-348   122-382 (389)
 11 2irm_A Mitogen-activated prote 100.0 1.1E-44 3.7E-49  363.0  18.3  246   55-343    25-357 (358)
 12 3d8k_A PP2C, protein phosphata 100.0 1.5E-44 5.3E-49  363.8  17.5  249   48-346    11-328 (377)
 13 2pnq_A [pyruvate dehydrogenase 100.0 2.6E-43 8.9E-48  363.6  17.2  258   51-343    38-456 (467)
 14 2pk0_A Serine/threonine protei 100.0   4E-40 1.4E-44  312.8  22.2  238   49-343     5-247 (250)
 15 1txo_A Putative bacterial enzy 100.0 8.4E-40 2.9E-44  308.2  22.4  230   47-342     2-236 (237)
 16 2j82_A TPPHA, protein serine-t 100.0 3.5E-39 1.2E-43  304.3  20.6  232   50-341     1-240 (240)
 17 2jfr_A Ser-Thr phosphatase MSP 100.0 4.4E-39 1.5E-43  302.7  20.8  226   48-341     4-233 (234)
 18 3rnr_A Stage II sporulation E  100.0 1.3E-34 4.6E-39  268.9  12.9  194   82-341     7-211 (211)
 19 3t91_A Stage II sporulation pr  99.9 3.4E-20 1.1E-24  174.8  20.1  209   46-347     4-225 (242)
 20 3pu9_A Protein serine/threonin  99.8 1.8E-18 6.1E-23  163.4  22.4  208   47-345     8-227 (242)
 21 3f79_A Probable two-component   99.7 5.3E-16 1.8E-20  147.2  17.9  193   66-342    48-253 (255)
 22 3zt9_A Serine phosphatase; hyd  99.7 2.3E-15   8E-20  137.2  18.3  188   50-340     4-193 (193)
 23 3ke6_A Protein RV1364C/MT1410;  99.3 1.4E-09 4.9E-14  109.7  26.7  191   67-344    50-259 (399)
 24 3eq2_A Probable two-component   98.5 8.3E-07 2.8E-11   88.7  12.9  191   66-342   187-392 (394)
 25 3s3x_D Psalmotoxin-1; acid-sen  46.8     6.8 0.00023   23.9   1.0    9    2-10      8-18  (37)
 26 3c4z_A Rhodopsin kinase; Ser/T  40.1    0.35 1.2E-05   50.2  -9.4   77  250-341    43-134 (543)

No 1  
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=100.00  E-value=4.7e-48  Score=379.51  Aligned_cols=269  Identities=22%  Similarity=0.394  Sum_probs=217.2

Q ss_pred             hcccccCCccccCCccccccCCCCceeEEEEEecccCCCCCCCCCCcchhhhhccccC-CCCeEEEEEEeCCCcchHHHH
Q 014765           24 IYSLHGKHLLTQRSLESASVPSYNFNLEYSVLTQRGYYPDSPDKENQDSYCIKTHVQG-SPNVHFFGVFDGHGQFGTQCS  102 (419)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~~~~~~R~~NED~~~v~~~~~~-~~~~~l~~V~DGhGg~G~~aS  102 (419)
                      ||..+.+|+.......     ..+..+.|++.|++|+     |+.|||++++...+.. ..+..||+||||||  |..+|
T Consensus         3 mg~~l~~p~~~~~~~~-----~~~~~~~~~~~s~~G~-----R~~nED~~~~~~~~~~~~~~~~l~~V~DGhG--G~~~a   70 (307)
T 2p8e_A            3 LGAFLDKPKTEKHNAH-----GAGNGLRYGLSSMQGW-----RVEMEDAHTAVVGIPHGLEDWSFFAVYDGHA--GSRVA   70 (307)
T ss_dssp             ---CCSSCEEEEEEEE-----EEETTEEEEEEEEEET-----SSSCCEEEEEEEEETTTEEEEEEEEEEEEES--CSHHH
T ss_pred             cccccCCCcccccccc-----CCCCCeeEEEEecCCC-----CCcccceEEEEecCCCCCCCeEEEEEECCCC--CHHHH
Confidence            6777776764444222     2356789999999998     9999999988654322 13578999999999  88899


Q ss_pred             HHHHHHHHHHHhcCCCCC-------------CcHHHHHHHHHHHHHHhhhccC---CCCCCCCceEEEEEEECCEEEEEE
Q 014765          103 NFVQQRLVEELANNPMLL-------------DDPVKAYDSAFLTVNAELHSSE---IDDTMSGTTAITVLVVGDKIYVAN  166 (419)
Q Consensus       103 ~~a~~~l~~~l~~~~~~~-------------~~~~~~l~~af~~~~~~l~~~~---~~~~~~GtT~~~v~i~~~~l~van  166 (419)
                      +++++.+.+.+.+...+.             .++.++|+++|..+|+.|....   .....+|||++++++.++++|+||
T Consensus        71 ~~as~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~van  150 (307)
T 2p8e_A           71 NYCSTHLLEHITTNEDFRAAGKSGSALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFIN  150 (307)
T ss_dssp             HHHHHHHHHHHHTSTTTC-----------CHHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEE
T ss_pred             HHHHHHHHHHHHhhHhhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEEE
Confidence            999998888886543332             2457899999999999998622   223569999999999999999999


Q ss_pred             cCCCcEEEEEecCCeEEEEccCCCCCCCChhHHHHHHHcCCeEeecccccCCCCCCCCCCCCCccCCCCCCeeeeecCcc
Q 014765          167 VGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMY  246 (419)
Q Consensus       167 vGDSRa~l~~~~g~~~~~~~LS~dH~~~~~~E~~RI~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~g~~  246 (419)
                      |||||+|+++ +|.   +++||.||++.++.|++||..+||.|..                                +++
T Consensus       151 vGDSRa~l~r-~g~---~~~lT~DH~~~~~~E~~rI~~~gg~v~~--------------------------------~rv  194 (307)
T 2p8e_A          151 CGDSRAVLYR-NGQ---VCFSTQDHKPCNPREKERIQNAGGSVMI--------------------------------QRV  194 (307)
T ss_dssp             ESSCEEEEEE-TTE---EEEECCCCCTTSHHHHHHHHHTTCCEET--------------------------------TEE
T ss_pred             ccCcEEEEEE-CCc---cccCCCCCCCCCHHHHHHHHHcCCEEEe--------------------------------Ccc
Confidence            9999999995 454   5899999999999999999999998741                                222


Q ss_pred             Cc-ceeeccCCCCcccc--------ceeEecccEEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHHc----cCCHHHHH
Q 014765          247 PG-TAFTRSVGDSTAEK--------IGVVAVPEVSVVQLTPNHLFFVVASDGVFEFLSSQAVVDMAAK----YTDARDAC  313 (419)
Q Consensus       247 ~G-laltRalGd~~~k~--------~~v~~~Pdi~~~~l~~~d~fLILaSDGlwd~ls~~ei~~iv~~----~~~~~~aa  313 (419)
                      +| +++||+||+..+|.        +.++++|++..+++.++|.|||||||||||+|+++++++++..    ..+++++|
T Consensus       195 ~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~~~~l~~~d~~llL~SDGl~d~ls~~ei~~~v~~~~~~~~~~~~~a  274 (307)
T 2p8e_A          195 NGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEYVKSRLEVSDDLENVC  274 (307)
T ss_dssp             TTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHH
T ss_pred             cCeEeccccccCHHHhcCcccCCCCCeEeccCeEEEEEcCCCCeEEEEECCCcccCCCHHHHHHHHHHHHhcCCCHHHHH
Confidence            33 68999999998764        4578999999999999999999999999999999999999986    47899999


Q ss_pred             HHHHHHHHHHHhccCCCCCCeEEEEEEeCCCC
Q 014765          314 AAIAGESYKLWLENENRTDDITIIIVHIKDFS  345 (419)
Q Consensus       314 ~~L~~~A~~~~~~~~g~~DNiTvIvV~l~~~~  345 (419)
                      +.|++.|+.     +|+.||+|||||++...+
T Consensus       275 ~~Lv~~A~~-----~g~~DNiTvivv~~~~~~  301 (307)
T 2p8e_A          275 NWVVDTCLH-----KGSRDNMSIVLVCFSNEG  301 (307)
T ss_dssp             HHHHHHHHH-----TTCCSCEEEEEEEC----
T ss_pred             HHHHHHHHH-----cCCCCCeEEEEEECCCCC
Confidence            999999999     899999999999997644


No 2  
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=100.00  E-value=5.8e-48  Score=378.26  Aligned_cols=270  Identities=27%  Similarity=0.441  Sum_probs=214.1

Q ss_pred             hcccccCCccccCCccccccCCCCceeEEEEEecccCCCCCCCCCCcchhhhhccccCCCCeEEEEEEeCCCcchHHHHH
Q 014765           24 IYSLHGKHLLTQRSLESASVPSYNFNLEYSVLTQRGYYPDSPDKENQDSYCIKTHVQGSPNVHFFGVFDGHGQFGTQCSN  103 (419)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~~~~~~R~~NED~~~v~~~~~~~~~~~l~~V~DGhGg~G~~aS~  103 (419)
                      ||..+..|+....+.     ...+..+.|++.|++|+     |+.|||++++...+  +++..||+||||||  |+.+|+
T Consensus         2 mg~~l~~p~~~~~~~-----~~~~~~~~~~~~s~~G~-----R~~nED~~~~~~~~--~~~~~l~~V~DGhG--G~~~a~   67 (304)
T 2i0o_A            2 LGAYLSEPLTTKDSS-----DESNEFLASGSSSMQGW-----RISQEDAHNCILNF--DDQCSFFAVYDGHG--GAEVAQ   67 (304)
T ss_dssp             CGGGTTCCCEEEEEE-----EEECSSEEEEEEEEEES-----SSCCCEEEEEEEEE--ETTEEEEEEEECSS--CSHHHH
T ss_pred             cccccCCCccccccc-----ccCCCceEEEEeecCCC-----CCCccCEEEEEecc--CCCeEEEEEEcCCC--CHHHHH
Confidence            677777776544422     22366789999999998     99999999876433  25788999999999  778888


Q ss_pred             HHHHHHHHHHhcCCCC-CCcHHHHHHHHHHHHHHhhhcc-----------------CCCCCCCCceEEEEEEECCEEEEE
Q 014765          104 FVQQRLVEELANNPML-LDDPVKAYDSAFLTVNAELHSS-----------------EIDDTMSGTTAITVLVVGDKIYVA  165 (419)
Q Consensus       104 ~a~~~l~~~l~~~~~~-~~~~~~~l~~af~~~~~~l~~~-----------------~~~~~~~GtT~~~v~i~~~~l~va  165 (419)
                      ++.+.+.+.+.+...+ ..++.++|+++|..+|+.|...                 ......+|||++++++.++++|++
T Consensus        68 ~as~~~~~~l~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~va  147 (304)
T 2i0o_A           68 YCSLHLPTFLKTVEAYGRKEFEKALKEAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVA  147 (304)
T ss_dssp             HHHHHHHHHHHHSHHHHTTCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHCC-----CCTTTSCEEEEEEEEEETTEEEEE
T ss_pred             HHHHHHHHHHHhhhhcccccHHHHHHHHHHHHHHHHHhhhhHHHHhhhccccccccccCCCCCCccEEEEEEECCEEEEE
Confidence            8888888877654221 2457899999999999998752                 112456999999999999999999


Q ss_pred             EcCCCcEEEEEecCCeEEEEccCCCCCCCChhHHHHHHHcCCeEeecccccCCCCCCCCCCCCCccCCCCCCeeeeecCc
Q 014765          166 NVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGM  245 (419)
Q Consensus       166 nvGDSRa~l~~~~g~~~~~~~LS~dH~~~~~~E~~RI~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~g~  245 (419)
                      ||||||+|+++ +|.   +++||.||++.++.|++||.++||.|..                               +++
T Consensus       148 nvGDSRa~l~r-~g~---~~~LT~DH~~~~~~e~~rI~~~gg~v~~-------------------------------~~r  192 (304)
T 2i0o_A          148 NAGDSRCVVCR-NGK---ALEMSFDHKPEDTVEYQRIEKAGGRVTL-------------------------------DGR  192 (304)
T ss_dssp             EESSCEEEEEE-TTE---EEECCCCCCTTSHHHHHHHHHTTCCBCT-------------------------------TSC
T ss_pred             EccCcEEEEEE-CCE---EEEcCCCcCCcCHHHHHHHHhCCCEEEe-------------------------------CCe
Confidence            99999999995 554   5899999999999999999999998742                               123


Q ss_pred             cCc-ceeeccCCCCcccc--------ceeEecccEEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHHc-----cCCHHH
Q 014765          246 YPG-TAFTRSVGDSTAEK--------IGVVAVPEVSVVQLTPNHLFFVVASDGVFEFLSSQAVVDMAAK-----YTDARD  311 (419)
Q Consensus       246 ~~G-laltRalGd~~~k~--------~~v~~~Pdi~~~~l~~~d~fLILaSDGlwd~ls~~ei~~iv~~-----~~~~~~  311 (419)
                      ++| +++||+||+..+|.        ++|+++|++..++|.++|.|||||||||||+|+++++++++..     ..++++
T Consensus       193 v~g~l~ltRalGd~~~k~~~~l~~~~~~v~~~pdi~~~~l~~~D~fllL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~  272 (304)
T 2i0o_A          193 VNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPEDEFMVLACDGIWNFMTSEQVVQFVQERINKPGMKLSK  272 (304)
T ss_dssp             BTTSCSCSBCEECGGGCCCTTSCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTCCHHHHHHHHHHHHTSTTCCHHH
T ss_pred             EcCceeccccccCHHHccCccCCccCCeEEeeCeEEEEEcCCCCeEEEEECcCccccCCHHHHHHHHHHHHhhcCCCHHH
Confidence            333 78999999988763        4678999999999999999999999999999999999999986     468999


Q ss_pred             HHHHHHHHHHHHHhcc-CCCCCCeEEEEEEeC
Q 014765          312 ACAAIAGESYKLWLEN-ENRTDDITIIIVHIK  342 (419)
Q Consensus       312 aa~~L~~~A~~~~~~~-~g~~DNiTvIvV~l~  342 (419)
                      +|+.|++.|+..|... .++.||+|||||+|+
T Consensus       273 ~a~~L~~~a~~~~~~g~~g~~DNiTvivv~~~  304 (304)
T 2i0o_A          273 ICEELFDHCLAPHTRGDGTGCDNMTAIIVQFK  304 (304)
T ss_dssp             HHHHHHHHHC------------CEEEEEEEEC
T ss_pred             HHHHHHHHHHHhhhccCCCCCCCeEEEEEEeC
Confidence            9999999998754322 468999999999985


No 3  
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=100.00  E-value=3.5e-46  Score=360.32  Aligned_cols=252  Identities=29%  Similarity=0.448  Sum_probs=207.8

Q ss_pred             EEEEEecccCCCCCCCCCCcchhhhhccccCCCCeEEEEEEeCCCcchHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHH
Q 014765           51 EYSVLTQRGYYPDSPDKENQDSYCIKTHVQGSPNVHFFGVFDGHGQFGTQCSNFVQQRLVEELANNPMLLDDPVKAYDSA  130 (419)
Q Consensus        51 ~~~~~s~~G~~~~~~R~~NED~~~v~~~~~~~~~~~l~~V~DGhGg~G~~aS~~a~~~l~~~l~~~~~~~~~~~~~l~~a  130 (419)
                      .+++.|++|.     |+.|||++++...   .++..+|+||||||  |..+|+++.+.+.+.+.+......++.++|+++
T Consensus         9 ~~g~~s~~G~-----R~~nED~~~~~~~---~~~~~l~~V~DG~G--G~~~a~~as~~~~~~l~~~~~~~~~~~~~l~~a   78 (274)
T 2iq1_A            9 NVGCASQIGK-----RKENEDRFDFAQL---TDEVLYFAVYDGHG--GPAAADFCHTHMEKCIMDLLPKEKNLETLLTLA   78 (274)
T ss_dssp             GCEEEEECCS-----SSSCCEEEEEEEC---SSSEEEEEEEEEES--STHHHHHHHHHHHHHHHHHTTTCCCHHHHHHHH
T ss_pred             eEEEEecccC-----CCCccceEEEeeC---CCCeEEEEEECCCC--CHHHHHHHHHHHHHHHHHHhcccccHHHHHHHH
Confidence            4789999998     9999999987542   36789999999999  777777777777666654333345788999999


Q ss_pred             HHHHHHhhhcc-----CCCCCCCCceEEEEEEEC-CEEEEEEcCCCcEEEEEecCCeEEEEccCCCCCCCChhHHHHHHH
Q 014765          131 FLTVNAELHSS-----EIDDTMSGTTAITVLVVG-DKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVKV  204 (419)
Q Consensus       131 f~~~~~~l~~~-----~~~~~~~GtT~~~v~i~~-~~l~vanvGDSRa~l~~~~g~~~~~~~LS~dH~~~~~~E~~RI~~  204 (419)
                      |..+|+.|...     ......+|||++++++.+ +++|++||||||+|+++ ++.   +++||.||++..+.|++||++
T Consensus        79 ~~~~~~~i~~~~~~~~~~~~~~~GtT~~~~~i~~~~~l~~anvGDSR~~l~r-~g~---~~~lT~DH~~~~~~E~~Ri~~  154 (274)
T 2iq1_A           79 FLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCR-KGK---PMKLTIDHTPERKDEKERIKK  154 (274)
T ss_dssp             HHHHHHHHHHHHHC---CCGGGCEECEEEEEEETTTEEEEEEESSCEEEEEE-TTE---EEECCCCCCTTSHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhccccCCCCCCCcEEEEEEECCCEEEEEEecCceEEEEe-CCE---eeECCCCCCCcCHHHHHHHHH
Confidence            99999998752     123356999999999985 59999999999999995 454   589999999999999999999


Q ss_pred             cCCeEeecccccCCCCCCCCCCCCCccCCCCCCeeeeecCccCc-ceeeccCCCCccccceeEecccEEEEEcCCC-CeE
Q 014765          205 CGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPG-TAFTRSVGDSTAEKIGVVAVPEVSVVQLTPN-HLF  282 (419)
Q Consensus       205 ~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~g~~~G-laltRalGd~~~k~~~v~~~Pdi~~~~l~~~-d~f  282 (419)
                      +||.|...+ +.                          ..+++| +++||+||+..+|.++++++|++..++|.++ |.|
T Consensus       155 ~gG~v~~~~-~~--------------------------~~~~~~~~~ltralGd~~~k~~~v~~~pdi~~~~l~~g~d~~  207 (274)
T 2iq1_A          155 CGGFVAWNS-LG--------------------------QPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSF  207 (274)
T ss_dssp             TTCCEEECT-TS--------------------------CEEETTTBSCSBCEECGGGTTTTCBCCCEEEEEECCTTTEEE
T ss_pred             cCCEEEcCC-CC--------------------------ceeECCeEeeccccCChhhccCCEEeCCEEEEEEeCCCCCcE
Confidence            999886421 10                          001122 7899999999998888999999999999985 678


Q ss_pred             EEEEcCCCCCCCCHHHHHHHHHccCCHHHHHHHHHHHHHHHHhccCCCCCCeEEEEEEeCCCCCCC
Q 014765          283 FVVASDGVFEFLSSQAVVDMAAKYTDARDACAAIAGESYKLWLENENRTDDITIIIVHIKDFSNLP  348 (419)
Q Consensus       283 LILaSDGlwd~ls~~ei~~iv~~~~~~~~aa~~L~~~A~~~~~~~~g~~DNiTvIvV~l~~~~~~~  348 (419)
                      ||||||||||+++++++++++....+|+++|+.|++.|+.     +|+.||+|||||++......+
T Consensus       208 lll~SDGl~d~l~~~ei~~~~~~~~~~~~~a~~L~~~A~~-----~g~~DNiTvivv~~~~~~~~~  268 (274)
T 2iq1_A          208 LVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQ-----YGTEDNSTAVVVPFGAWGKEG  268 (274)
T ss_dssp             EEEECHHHHTTCCHHHHHHHHHTSSSHHHHHHHHHHHHHH-----TTCCSCEEEEEEECTTC----
T ss_pred             EEEEccCcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHH-----cCCCCCeEEEEEEccCCCCCC
Confidence            9999999999999999999999888999999999999999     899999999999998655443


No 4  
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=100.00  E-value=1.6e-46  Score=379.05  Aligned_cols=271  Identities=21%  Similarity=0.407  Sum_probs=219.1

Q ss_pred             hcccccCCccccCCccccccCCCCceeEEEEEecccCCCCCCCCCCcchhhhhccccC-CCCeEEEEEEeCCCcchHHHH
Q 014765           24 IYSLHGKHLLTQRSLESASVPSYNFNLEYSVLTQRGYYPDSPDKENQDSYCIKTHVQG-SPNVHFFGVFDGHGQFGTQCS  102 (419)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~~~~~~R~~NED~~~v~~~~~~-~~~~~l~~V~DGhGg~G~~aS  102 (419)
                      ||..+.+|........     .....+.|++.|++|+     |+.|||++++...+.. ..+..||+||||||  |..+|
T Consensus         1 mg~~l~~p~~~k~~~~-----~~~~~l~~g~~s~~G~-----R~~nEDa~~~~~~~~~~~~~~~lf~V~DGhG--G~~aa   68 (382)
T 1a6q_A            1 MGAFLDKPKMEKHNAQ-----GQGNGLRYGLSSMQGW-----RVEMEDAHTAVIGLPSGLESWSFFAVYDGHA--GSQVA   68 (382)
T ss_dssp             -CCCCSSCEEEEEEEE-----EEETTEEEEEEEEEET-----SSSCCEEEEEEEEETTTEEEEEEEEEEEEES--CSHHH
T ss_pred             CCccccCCcccccccc-----CCCCceEEEEEecCCC-----CCCCCceeEEecCCCCCCCCeEEEEEEcCCC--cHHHH
Confidence            5666666654433222     2346789999999998     9999999988654422 13578999999999  77778


Q ss_pred             HHHHHHHHHHHhcCC--------CCCCcHHHHHHHHHHHHHHhhhcc---CCCCCCCCceEEEEEEECCEEEEEEcCCCc
Q 014765          103 NFVQQRLVEELANNP--------MLLDDPVKAYDSAFLTVNAELHSS---EIDDTMSGTTAITVLVVGDKIYVANVGDSR  171 (419)
Q Consensus       103 ~~a~~~l~~~l~~~~--------~~~~~~~~~l~~af~~~~~~l~~~---~~~~~~~GtT~~~v~i~~~~l~vanvGDSR  171 (419)
                      +++.+.+.+.+.+..        .....+.++|+++|..+|+.|...   ......+|||++++++.++++|++||||||
T Consensus        69 ~~as~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~af~~~n~~i~~~~~~~~~~~~~GtT~~~~li~~~~l~vanvGDSR  148 (382)
T 1a6q_A           69 KYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSR  148 (382)
T ss_dssp             HHHHHHHHHHHHTSHHHHCSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCE
T ss_pred             HHHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCcceEEEEEEECCeEEEEEcCCCe
Confidence            887777777665321        112346789999999999998752   233456999999999999999999999999


Q ss_pred             EEEEEecCCeEEEEccCCCCCCCChhHHHHHHHcCCeEeecccccCCCCCCCCCCCCCccCCCCCCeeeeecCccCc-ce
Q 014765          172 AVIAVKDGNRIIAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPG-TA  250 (419)
Q Consensus       172 a~l~~~~g~~~~~~~LS~dH~~~~~~E~~RI~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~g~~~G-la  250 (419)
                      +|+++ +|.   +.+||.||++.++.|++||..+||.|..                                ++++| ++
T Consensus       149 ayl~r-~g~---~~~LT~DHs~~~~~E~~RI~~~gg~v~~--------------------------------~Rv~g~l~  192 (382)
T 1a6q_A          149 GLLCR-NRK---VHFFTQDHKPSNPLEKERIQNAGGSVMI--------------------------------QRVNGSLA  192 (382)
T ss_dssp             EEEEE-TTE---EEEECCCCCTTSHHHHHHHHHTTCCEET--------------------------------TEETTTBS
T ss_pred             EEEEE-CCc---eEEeCCCCCCCCHHHHHHHHhcCcEEec--------------------------------ccccCcee
Confidence            99995 454   5899999999999999999999998742                                12233 68


Q ss_pred             eeccCCCCcccc--------ceeEecccEEEEEcC-CCCeEEEEEcCCCCCCCCHHHHHHHHHc----cCCHHHHHHHHH
Q 014765          251 FTRSVGDSTAEK--------IGVVAVPEVSVVQLT-PNHLFFVVASDGVFEFLSSQAVVDMAAK----YTDARDACAAIA  317 (419)
Q Consensus       251 ltRalGd~~~k~--------~~v~~~Pdi~~~~l~-~~d~fLILaSDGlwd~ls~~ei~~iv~~----~~~~~~aa~~L~  317 (419)
                      +|||||+..+|.        +.|+++|++..+++. ++|.|||||||||||+|+++++++++..    ..+++++|+.|+
T Consensus       193 ltRalGd~~~K~~~~~~~~~~~v~~~Pdv~~~~l~~~~dd~llLaSDGlwd~ls~~ei~~~v~~~~~~~~~~~~~a~~Lv  272 (382)
T 1a6q_A          193 VSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVV  272 (382)
T ss_dssp             CSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred             eeeecCcHhhcccccCCCccCeeeeeeeEEEEEccCCCCeEEEEeccCccCCCChHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence            999999998764        457899999999999 8888899999999999999999999986    468999999999


Q ss_pred             HHHHHHHhccCCCCCCeEEEEEEeCCCCCC
Q 014765          318 GESYKLWLENENRTDDITIIIVHIKDFSNL  347 (419)
Q Consensus       318 ~~A~~~~~~~~g~~DNiTvIvV~l~~~~~~  347 (419)
                      +.|+.     +|+.||+|||||+|...++.
T Consensus       273 ~~A~~-----~g~~DNiTvivv~~~~~~~~  297 (382)
T 1a6q_A          273 DTCLY-----KGSRDNMSVILICFPNAPKV  297 (382)
T ss_dssp             HHHHH-----TTCCSCEEEEEEECTTSCCC
T ss_pred             HHHHh-----cCCcCCEEEEEEEecCCCCC
Confidence            99998     89999999999999865543


No 5  
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=100.00  E-value=7.6e-46  Score=366.07  Aligned_cols=261  Identities=24%  Similarity=0.415  Sum_probs=202.6

Q ss_pred             ceeEEEEEecccCCCCCCCCCCcchhhhhccc-cCCCCeEEEEEEeCCCcchHHHHHHHHHHHHHHHhcCCCC-------
Q 014765           48 FNLEYSVLTQRGYYPDSPDKENQDSYCIKTHV-QGSPNVHFFGVFDGHGQFGTQCSNFVQQRLVEELANNPML-------  119 (419)
Q Consensus        48 ~~~~~~~~s~~G~~~~~~R~~NED~~~v~~~~-~~~~~~~l~~V~DGhGg~G~~aS~~a~~~l~~~l~~~~~~-------  119 (419)
                      +.+.+++.|++|.     |+.|||++++.... ....+..||+||||||  |+.+++++.+.+.+.+.+.+.+       
T Consensus        20 ~~~~~~~~s~~G~-----R~~nED~~~~~~~~~~~~~~~~l~~V~DGhG--G~~~~~~as~~~~~~l~~~~~~~~~~~~l   92 (324)
T 2i44_A           20 PAFDAAIFTDIGG-----RKHQEDRFTLCPQLVPGRDDCAFFGVFDGTV--GDFASENVKDLVVPQLISSPAWQEVTEML   92 (324)
T ss_dssp             TTEEEEEEEECTT-----SSSCCEEEEEESCCSTTCSSEEEEEEEEEES--SSHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred             cceEEEEEECCCC-----CCccCCeEEEEecCCCCCCCeEEEEEeCCCC--chHHHHHHHHHHHHHHHhhhHHHHHHHHh
Confidence            5788999999998     99999999886432 2346789999999999  6666666666666665442111       


Q ss_pred             -------------CCcHHHHHHHHHHHHHHhhhcc--CCCCCCCCceEEEEEEECCEEEEEEcCCCcEEEEEecCCeEEE
Q 014765          120 -------------LDDPVKAYDSAFLTVNAELHSS--EIDDTMSGTTAITVLVVGDKIYVANVGDSRAVIAVKDGNRIIA  184 (419)
Q Consensus       120 -------------~~~~~~~l~~af~~~~~~l~~~--~~~~~~~GtT~~~v~i~~~~l~vanvGDSRa~l~~~~g~~~~~  184 (419)
                                   ..++.++|+++|..+|+.|...  .......|+|++++++.++++|+|||||||+|+++.++..+.+
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~g~gtt~~~i~~~~l~vanvGDSRa~l~r~~~~g~~~  172 (324)
T 2i44_A           93 RSDVPATEVDEKLPQLLDQAVDDMYKNADNELVKMCEQLNKDYASSTSVTAVLAKGFVAVGHLGDSRIAMGVETPNGLNC  172 (324)
T ss_dssp             TSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCEECEEEEEEETTEEEEEEESSCEEEEEEEETTEEEE
T ss_pred             hccCCccccccccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEECCeEEEEEccCceEEEEeccCCCceE
Confidence                         1245789999999999999762  1112234555555568999999999999999999764221236


Q ss_pred             EccCCCCCCCChhHHHHHHHcCCeEeecccccCCCCCCCCCCCCCccCCCCCCeeeeecCccCcceeeccCCC----Ccc
Q 014765          185 EDLSHDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGD----STA  260 (419)
Q Consensus       185 ~~LS~dH~~~~~~E~~RI~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~g~~~GlaltRalGd----~~~  260 (419)
                      ++||.||++..+.|++||.++||.|..   +.                 ++|.+.+..+|   ++++||+||+    ..+
T Consensus       173 ~~LT~DH~~~~~~E~~Ri~~~Gg~v~~---~~-----------------~~~~~~~~~~g---~l~~sra~Gd~p~~~~~  229 (324)
T 2i44_A          173 EFLTVDHKPDMPHEKLRIMRNGGSVEY---LH-----------------NHNNKPFIRGG---DFSFRKSRGEQPMQLQY  229 (324)
T ss_dssp             EESCCCCCTTSHHHHHHHHHTTCEEEC---CT-----------------TCTTSCEEECT---THHHHHHTTCCCCCBSS
T ss_pred             EECCCCCCCcCHHHHHHHHHcCCEEEe---cc-----------------cccCCCccccC---cccchhhcCCcccccee
Confidence            899999999999999999999999842   11                 12222222222   2789999999    333


Q ss_pred             ---------ccceeEecccEEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHHcc----CCHHH--HHHHHHHHHHHHHh
Q 014765          261 ---------EKIGVVAVPEVSVVQLTPNHLFFVVASDGVFEFLSSQAVVDMAAKY----TDARD--ACAAIAGESYKLWL  325 (419)
Q Consensus       261 ---------k~~~v~~~Pdi~~~~l~~~d~fLILaSDGlwd~ls~~ei~~iv~~~----~~~~~--aa~~L~~~A~~~~~  325 (419)
                               +.++++++|++..++|.++|.|||||||||||+|+++++++++...    .++++  +|+.|++.|+.   
T Consensus       230 ~~~~g~~~~~~~~v~~~pdv~~~~l~~~d~~llLaSDGl~d~ls~~ei~~~v~~~~~~~~~~~~~~~a~~L~~~A~~---  306 (324)
T 2i44_A          230 SRAFGGKDLKMYGLSNQPDVRVVRVTPQHRVMILATDGLWDVMSAAQAVEIAMQARQEGRNPAQALVEMTLAEQQSR---  306 (324)
T ss_dssp             SBCEECGGGTTTTCBCCCEEEEEECCTTEEEEEEECHHHHTTCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHT---
T ss_pred             ccccCCccccCCeEeecCEEEEEEcCCCCeEEEEEcCchhccCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHh---
Confidence                     4567899999999999999988999999999999999999999765    68999  99999999998   


Q ss_pred             ccCCCCCCeEEEEEEeCC
Q 014765          326 ENENRTDDITIIIVHIKD  343 (419)
Q Consensus       326 ~~~g~~DNiTvIvV~l~~  343 (419)
                        +|+.||+|||||+|..
T Consensus       307 --~g~~DNiTvivv~~~~  322 (324)
T 2i44_A          307 --NQSADNITAMTVFFKK  322 (324)
T ss_dssp             --TCCCCCEEEEEEEEC-
T ss_pred             --cCCCCCCEEEEEEeeC
Confidence              8999999999999974


No 6  
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=100.00  E-value=6e-46  Score=369.18  Aligned_cols=252  Identities=29%  Similarity=0.477  Sum_probs=204.2

Q ss_pred             EEEEEecccCCCCCCCCCCcchhhhhccccC------------------CCCeEEEEEEeCCCcc--hHHHHHHHHHHHH
Q 014765           51 EYSVLTQRGYYPDSPDKENQDSYCIKTHVQG------------------SPNVHFFGVFDGHGQF--GTQCSNFVQQRLV  110 (419)
Q Consensus        51 ~~~~~s~~G~~~~~~R~~NED~~~v~~~~~~------------------~~~~~l~~V~DGhGg~--G~~aS~~a~~~l~  110 (419)
                      .||..|++|+     |..|||++++...+..                  ..+..||+|||||||+  |..|++.+.+.|.
T Consensus        15 ~~G~~s~~G~-----R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~   89 (337)
T 3qn1_B           15 LWGTVSIQGN-----RSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALA   89 (337)
T ss_dssp             CEEEEEECTT-----SSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEESSSHHHHHHHHHHHHHHH
T ss_pred             ceEEEEeeeC-----CchhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCCChhHHHHHHHHHHHHHH
Confidence            4899999999     9999999998655321                  1257899999999965  5555555555555


Q ss_pred             HHHhcCCC----------CCCcHHHHHHHHHHHHHHhhhccC--------------CCCCCCCceEEEEEEECCEEEEEE
Q 014765          111 EELANNPM----------LLDDPVKAYDSAFLTVNAELHSSE--------------IDDTMSGTTAITVLVVGDKIYVAN  166 (419)
Q Consensus       111 ~~l~~~~~----------~~~~~~~~l~~af~~~~~~l~~~~--------------~~~~~~GtT~~~v~i~~~~l~van  166 (419)
                      +.+.....          ....+.++|+++|..+|.+|....              .....+|||++++++.++++|++|
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~an  169 (337)
T 3qn1_B           90 EEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSN  169 (337)
T ss_dssp             HHHHHTC------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEECSSEEEEEE
T ss_pred             HHHHhhhhhhhccccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEEEECCEEEEEe
Confidence            55543321          124578999999999999997522              223569999999999999999999


Q ss_pred             cCCCcEEEEEecCCeEEEEccCCCCCCCChhHHHHHHHcCCeEeecccccCCCCCCCCCCCCCccCCCCCCeeeeecCcc
Q 014765          167 VGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMY  246 (419)
Q Consensus       167 vGDSRa~l~~~~g~~~~~~~LS~dH~~~~~~E~~RI~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~g~~  246 (419)
                      |||||+|+++ ++.   .++||.||++.++.|+.||..+||.+...+                             ..++
T Consensus       170 vGDSR~~l~r-~g~---~~~lT~DH~~~~~~e~~ri~~~gg~v~~~~-----------------------------~~r~  216 (337)
T 3qn1_B          170 CGDSRAVLFR-GKE---AMPLSVDHKPDREDEYARIENAGGKVIQWQ-----------------------------GARV  216 (337)
T ss_dssp             ESSCEEEEEE-TTE---EEESCCCCCTTSHHHHHHHHHTTCCEEESS-----------------------------SEEE
T ss_pred             ccCcEEEEEe-CCE---eeeecCCCCCCCHHHHHHHHHcCCeEEecC-----------------------------Ccee
Confidence            9999999995 554   589999999999999999999999986421                             1223


Q ss_pred             Cc-ceeeccCCCCccccceeEecccEEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHHc--------------------
Q 014765          247 PG-TAFTRSVGDSTAEKIGVVAVPEVSVVQLTPNHLFFVVASDGVFEFLSSQAVVDMAAK--------------------  305 (419)
Q Consensus       247 ~G-laltRalGd~~~k~~~v~~~Pdi~~~~l~~~d~fLILaSDGlwd~ls~~ei~~iv~~--------------------  305 (419)
                      +| +++||+||+..++. .++++|++..+++.+.+.|||||||||||+|++++++++++.                    
T Consensus       217 ~g~l~~sRalGd~~~~~-~v~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (337)
T 3qn1_B          217 FGVLAMSRSIGDRYLKP-YVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKG  295 (337)
T ss_dssp             TTTBSCSBCEECGGGTT-TSBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHHHHHHHHCCC----CCSS
T ss_pred             cCccccccccccccccC-CCCCcceEEEEEeCCCCCEEEEEecCcccCCCHHHHHHHHHHHhhhhccccccccccccccc
Confidence            33 79999999988764 588999999999977778899999999999999999999975                    


Q ss_pred             -cCCHHHHHHHHHHHHHHHHhccCCCCCCeEEEEEEeCCCCC
Q 014765          306 -YTDARDACAAIAGESYKLWLENENRTDDITIIIVHIKDFSN  346 (419)
Q Consensus       306 -~~~~~~aa~~L~~~A~~~~~~~~g~~DNiTvIvV~l~~~~~  346 (419)
                       ..+++++|+.|++.|+.     +|+.||+|||||+|+...+
T Consensus       296 ~~~~~~~~a~~Lv~~A~~-----~g~~DNiTvivv~l~~~~~  332 (337)
T 3qn1_B          296 IDPACQAAADYLSMLALQ-----KGSKDNISIIVIDLKAQRK  332 (337)
T ss_dssp             CCHHHHHHHHHHHHHHHH-----TTCCSCEEEEEEECCSCC-
T ss_pred             cChhHHHHHHHHHHHHHH-----cCCCCCEEEEEEEecCCcc
Confidence             34578999999999999     8999999999999986544


No 7  
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=100.00  E-value=1.3e-45  Score=370.07  Aligned_cols=251  Identities=26%  Similarity=0.400  Sum_probs=207.2

Q ss_pred             CceeEEEEEecccCCCCCCCCCCcchhhhhccccCCCCeEEEEEEeCCCcchHHHHHHHHHHHHHHHhcCCCCCCcHHHH
Q 014765           47 NFNLEYSVLTQRGYYPDSPDKENQDSYCIKTHVQGSPNVHFFGVFDGHGQFGTQCSNFVQQRLVEELANNPMLLDDPVKA  126 (419)
Q Consensus        47 ~~~~~~~~~s~~G~~~~~~R~~NED~~~v~~~~~~~~~~~l~~V~DGhGg~G~~aS~~a~~~l~~~l~~~~~~~~~~~~~  126 (419)
                      +..+.++..|++|+     |+.|||++++...+...++..||+||||||  |+.||++++++|.+.+.+...+   ..+.
T Consensus        10 ~~~~~~~~~s~~G~-----R~~nED~~~v~~~~~~~~~~~lf~VfDGHG--G~~as~~a~~~l~~~l~~~~~~---~~~~   79 (364)
T 2isn_A           10 EWYTTTVAATMLGR-----RPTDEDAILVSAPATSRPNVRIKAVFDGHA--GEATSQYCAKHAAKHLGKLSEF---TFAE   79 (364)
T ss_dssp             ETTEEEEEEEECTT-----SSSCCEEEEEECC----CCEEEEEEEEEES--CSHHHHHHHHHHHHHHTTCSSC---CHHH
T ss_pred             CCceEEEEEEcCCC-----CCcCCCeeEEeccCCCCCCeEEEEEEECCC--CHHHHHHHHHHHHHHHHHhhcc---cHHH
Confidence            34478999999998     999999998876665567889999999999  9999999999999999765433   3578


Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCceEEEEEEEC-----------------------------------------------
Q 014765          127 YDSAFLTVNAELHSSEIDDTMSGTTAITVLVVG-----------------------------------------------  159 (419)
Q Consensus       127 l~~af~~~~~~l~~~~~~~~~~GtT~~~v~i~~-----------------------------------------------  159 (419)
                      |+++|..+|+.|.........+|||++++++.+                                               
T Consensus        80 l~~a~~~~d~~i~~~~~~~~~~GtT~v~~~i~~~~~p~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~  159 (364)
T 2isn_A           80 VKKACLSLDAEIIRKLGPKHVAGSTGIIVAIERLSAPVVENVVGREIVPRAHEETFVPLEKLIQEEEEAEHPELVGRYPR  159 (364)
T ss_dssp             HHHHHHHHHHHHHHHHCSSSCCEECEEEEEEEECSSCEEEEEETTEECCC-----CCCHHHHHHHHHHC-----CCSSCC
T ss_pred             HHHHHHHHHHHHHHhcccCCCCCcceehhhhhccccccccccccccccccccccchhhhhhhhhhhhhcccccccccccc
Confidence            999999999999763222356999999999852                                               


Q ss_pred             -------------CEEEEEEcCCCcEEEEEecCCeEEEEccCCCCCCCChhHHHHHHHcCCeEeecccccCCCCCCCCCC
Q 014765          160 -------------DKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPNIQTW  226 (419)
Q Consensus       160 -------------~~l~vanvGDSRa~l~~~~g~~~~~~~LS~dH~~~~~~E~~RI~~~Gg~v~~~~~~~~~~~~~~~~~  226 (419)
                                   .++|+|||||||+|+++++|.   +++||.||++.++.|++||.++||.|...    ++        
T Consensus       160 ~~~~~~~~~~~g~~~l~vanvGDSRayl~~r~g~---~~~LT~DH~~~~~~e~~rI~~~gG~v~~~----~~--------  224 (364)
T 2isn_A          160 VPDVQQKTIPAGSFLVTAINIGDSRATLIHSDGG---LTRLSKDHKPNHPTEASRIEKAGGSVETF----DV--------  224 (364)
T ss_dssp             CCCCEEEEECTTCEEEEEEEESSCEEEEECTTSC---EEECCCCCCTTSHHHHHHHHHTTCCEEES----SS--------
T ss_pred             cccccccccccCccEEEEEECccCEEEEEeeCCE---EEEcCcCCCCCCHHHHHHHHHcCCeEecC----CC--------
Confidence                         389999999999999965665   58999999999999999999999988541    11        


Q ss_pred             CCCccCCCCCCeeeeecCccCc-ceeeccCCCCcccc--------ceeEecccEEEEEcCCCCeEEEEEcCCCCCCCC--
Q 014765          227 GDEESQGGDPPRLWVQNGMYPG-TAFTRSVGDSTAEK--------IGVVAVPEVSVVQLTPNHLFFVVASDGVFEFLS--  295 (419)
Q Consensus       227 ~~~~~~~~~p~r~~~~~g~~~G-laltRalGd~~~k~--------~~v~~~Pdi~~~~l~~~d~fLILaSDGlwd~ls--  295 (419)
                                +|       ++| +++|||||+..+|.        ++++++||+..+++.++| |||||||||||+++  
T Consensus       225 ----------~r-------v~g~l~ltRalGd~~~k~~~~l~~~~~~v~~~Pdv~~~~l~~~D-~llL~SDGl~d~l~~~  286 (364)
T 2isn_A          225 ----------PR-------VDGVLALSRAFGDSDFKMNPNLPPEEQKVIAVPDVRQFYALSSD-LLLLACDGVYEPSGMD  286 (364)
T ss_dssp             ----------EE-------ETTTBSCSBCEECGGGSCCCSSCGGGSSSBCCCEEEEEEECTTC-EEEEECHHHHCSSSCC
T ss_pred             ----------cc-------cCCceeeEEEecchhhccccccCcccCceEEEeEEEEEECCCCC-EEEEEcCCCCCCCCCC
Confidence                      11       112 68999999998763        567899999999999998 68999999999976  


Q ss_pred             HHHHHHHH-----HccCCHHHHHHHHHHHHHHHHhccCCCCCCeEEEEEEeCCCC
Q 014765          296 SQAVVDMA-----AKYTDARDACAAIAGESYKLWLENENRTDDITIIIVHIKDFS  345 (419)
Q Consensus       296 ~~ei~~iv-----~~~~~~~~aa~~L~~~A~~~~~~~~g~~DNiTvIvV~l~~~~  345 (419)
                      ++++.+++     ....+++++|+.|++.|+.     +|+.||+|||||+|....
T Consensus       287 ~~~v~~~~~~~~~~~~~~~~~~a~~Lv~~A~~-----~g~~DNiTvivv~~~~~~  336 (364)
T 2isn_A          287 WAYVRDLTVAEMQRSKGDLEEVAARVMDYAYD-----MNSQDNISVMLVAFHNQE  336 (364)
T ss_dssp             HHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHH-----TTCCSCEEEEEEEECSSC
T ss_pred             HHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHh-----cCCCCCEEEEEEEcCCCC
Confidence            88887765     3346899999999999999     899999999999998654


No 8  
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=100.00  E-value=1.5e-45  Score=363.19  Aligned_cols=254  Identities=30%  Similarity=0.464  Sum_probs=202.5

Q ss_pred             eeEEEEEecccCCCCCCCCCCcchhhhhccccC-------------CCCeEEEEEEeCCCcc--hHHHHHHHHHHHHHHH
Q 014765           49 NLEYSVLTQRGYYPDSPDKENQDSYCIKTHVQG-------------SPNVHFFGVFDGHGQF--GTQCSNFVQQRLVEEL  113 (419)
Q Consensus        49 ~~~~~~~s~~G~~~~~~R~~NED~~~v~~~~~~-------------~~~~~l~~V~DGhGg~--G~~aS~~a~~~l~~~l  113 (419)
                      -+.||+.|++|+     |+.|||++++...+..             ..+..+|+|||||||+  |..||+.+.+.|.+.+
T Consensus         8 ~~~~g~~s~~G~-----R~~nEDa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~   82 (316)
T 3kdj_B            8 VPLYGFTSICGR-----RPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEI   82 (316)
T ss_dssp             --CEEEEEECTT-----SSSCCEEEEEETTCC-----------CCGGGGCEEEEEEEEESSSHHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEeEeC-----CCCCccceeeecccccccccccccccccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHHH
Confidence            357899999999     9999999988654321             2367899999999966  6666666666666655


Q ss_pred             hcCCCC-------CCcHHHHHHHHHHHHHHhhhccCCCCCCCCceEEEEEEECCEEEEEEcCCCcEEEEEecCCeEEEEc
Q 014765          114 ANNPML-------LDDPVKAYDSAFLTVNAELHSSEIDDTMSGTTAITVLVVGDKIYVANVGDSRAVIAVKDGNRIIAED  186 (419)
Q Consensus       114 ~~~~~~-------~~~~~~~l~~af~~~~~~l~~~~~~~~~~GtT~~~v~i~~~~l~vanvGDSRa~l~~~~g~~~~~~~  186 (419)
                      ......       .+.+.++|.++|..+|.++....  ...+|||++++++.++++|++||||||+|+++ ++.   .++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~--~~~~GtT~~~~~i~~~~l~vanvGDSR~yl~r-~g~---~~~  156 (316)
T 3kdj_B           83 AKEKPMLSDGDTWLEKWKKALFNSFLRVDSEIESVA--PETVGSTSVVAVVFPSHIFVANCGDSRAVLCR-GKT---ALP  156 (316)
T ss_dssp             HHHCCCGGGTHHHHHHHHHHHHHHHHHHHHHGGGTS--CTTCEECEEEEEECSSEEEEEEESSCEEEEEE-TTE---EEE
T ss_pred             HhhhcccccccchHHHHHHHHHHHHHHHHHHHhccc--CCCCCCcEEEEEEECCEEEEEEccCCEEEEEE-CCE---ecc
Confidence            443221       12467899999999999986532  34599999999999999999999999999995 554   589


Q ss_pred             cCCCCCCCChhHHHHHHHcCCeEeecccccCCCCCCCCCCCCCccCCCCCCeeeeecCccCc-ceeeccCCCCcccccee
Q 014765          187 LSHDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPG-TAFTRSVGDSTAEKIGV  265 (419)
Q Consensus       187 LS~dH~~~~~~E~~RI~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~g~~~G-laltRalGd~~~k~~~v  265 (419)
                      ||.||++..+.|+.||..+||.+....                             ++++.| +++||+||+..++. .+
T Consensus       157 lT~DH~~~~~~e~~ri~~~~g~v~~~~-----------------------------~~r~~g~l~~sRalGd~~~~~-~~  206 (316)
T 3kdj_B          157 LSVDHKPDREDEAARIEAAGGKVIQWN-----------------------------GARVFGVLAMSRSIGDRYLKP-SI  206 (316)
T ss_dssp             SCCCCCTTSHHHHHHHHHTTCCEEESS-----------------------------SEEETTTBSCSBCEECGGGTT-TS
T ss_pred             cCCCCCCCCHHHHHHHHHcCCeEEecC-----------------------------CceEcceeccccccCccccCC-Cc
Confidence            999999999999999999999886421                             122333 79999999988764 58


Q ss_pred             EecccEEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHHc---------------------------cCCHHHHHHHHHH
Q 014765          266 VAVPEVSVVQLTPNHLFFVVASDGVFEFLSSQAVVDMAAK---------------------------YTDARDACAAIAG  318 (419)
Q Consensus       266 ~~~Pdi~~~~l~~~d~fLILaSDGlwd~ls~~ei~~iv~~---------------------------~~~~~~aa~~L~~  318 (419)
                      +++|++..+.+...+.|||||||||||+|+++|++++++.                           ..+++++|+.|++
T Consensus       207 ~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~Lv~  286 (316)
T 3kdj_B          207 IPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRILLWHKKNAVAGGASLLADERRKEGKDPAAMSAAEYLSK  286 (316)
T ss_dssp             BCCCEEEEEECCTTEEEEEEECHHHHTSSCHHHHHHHHHHHHHHHTTC-----------------CCCHHHHHHHHHHHH
T ss_pred             CCCCceEEEEecCCCCEEEEEccCcccCCCHHHHHHHHHHHhhhhccccccccccccccccccccccCchHHHHHHHHHH
Confidence            8999999999666667789999999999999999999975                           2357889999999


Q ss_pred             HHHHHHhccCCCCCCeEEEEEEeCCCCCCC
Q 014765          319 ESYKLWLENENRTDDITIIIVHIKDFSNLP  348 (419)
Q Consensus       319 ~A~~~~~~~~g~~DNiTvIvV~l~~~~~~~  348 (419)
                      .|+.     +|+.||+|||||++...+..+
T Consensus       287 ~A~~-----~g~~DNiTvivv~l~~~~~~~  311 (316)
T 3kdj_B          287 LAIQ-----RGSKDNISVVVVDLKPRRKLK  311 (316)
T ss_dssp             HHHH-----TTCCSCEEEEEEECSCC----
T ss_pred             HHHH-----cCCCCCeEEEEEEccCCCccc
Confidence            9999     899999999999998765544


No 9  
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=100.00  E-value=1.8e-45  Score=373.73  Aligned_cols=282  Identities=23%  Similarity=0.340  Sum_probs=217.7

Q ss_pred             cCCccccC--CccccccCCCCceeEEEEEecccCCCCCCCC---CCcchhhhhccccCCCCeEEEEEEeCCCcchHHHHH
Q 014765           29 GKHLLTQR--SLESASVPSYNFNLEYSVLTQRGYYPDSPDK---ENQDSYCIKTHVQGSPNVHFFGVFDGHGQFGTQCSN  103 (419)
Q Consensus        29 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~s~~G~~~~~~R~---~NED~~~v~~~~~~~~~~~l~~V~DGhGg~G~~aS~  103 (419)
                      +|.++.+.  .+|....|... .+.+|+.+++|+++++.|+   .|||++++..   ...+..|||||||||  |..||+
T Consensus         5 ~r~~~~~~~~~~~~~~~~~~~-~~~~G~~~~~G~r~~g~~~~r~~nED~~~~~~---~~~~~~lf~V~DGhG--G~~aa~   78 (401)
T 2j4o_A            5 RRSLLQSEQQPSWTDDLPLCH-LSGVGSASNRSYSADGKGTESHPPEDSWLKFR---SENNCFLYGVFNGYD--GNRVTN   78 (401)
T ss_dssp             -----------CCTTTSCBCT-TEEEEEECCEEECSSSSCEECCCCCEEEEEEE---ETTTEEEEEEEEEES--SSHHHH
T ss_pred             cccccccccCCCccccccccc-cCceeEEecccccccccccCCCCCCceEEEec---CCCCeEEEEEEcCCC--CHHHHH
Confidence            34455544  56666666554 5689999999996654433   7999998753   236789999999999  999999


Q ss_pred             HHHHHHHHHHhcCC----CCCCcHHHHHHHHHHHHHHhhhccC-------------------------------------
Q 014765          104 FVQQRLVEELANNP----MLLDDPVKAYDSAFLTVNAELHSSE-------------------------------------  142 (419)
Q Consensus       104 ~a~~~l~~~l~~~~----~~~~~~~~~l~~af~~~~~~l~~~~-------------------------------------  142 (419)
                      ++.+.|.+.+.+..    ....++.++|+++|..+|+.|....                                     
T Consensus        79 ~as~~l~~~l~~~~~~~~~~~~~~~~~l~~af~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  158 (401)
T 2j4o_A           79 FVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTL  158 (401)
T ss_dssp             HHHHHHHHTTSSSSCCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCSSCSCGGGHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccccccchhhhhhhcc
Confidence            99999998886421    1234678899999999998875410                                     


Q ss_pred             CCCCCCCceEEEEEEECCEEEEEEcCCCcEEEEEecCCeEEEEccCCCCCCCChhHHHHHHHcCCeEeecccccCCCCCC
Q 014765          143 IDDTMSGTTAITVLVVGDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPN  222 (419)
Q Consensus       143 ~~~~~~GtT~~~v~i~~~~l~vanvGDSRa~l~~~~g~~~~~~~LS~dH~~~~~~E~~RI~~~Gg~v~~~~~~~~~~~~~  222 (419)
                      .....+|||++++++.++++|+|||||||+|+++.+..-+.+++||.||+|.++.|++||.++||.+....   .     
T Consensus       159 ~~~~~~GtTa~~~li~~~~l~vanvGDSRa~l~r~~~~g~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~---~-----  230 (401)
T 2j4o_A          159 EREISGGAMAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIK---Q-----  230 (401)
T ss_dssp             HHHHCCEEEEEEEEEETTEEEEEEESSCEEEEEEECSSSEEEEECSCCCSTTSHHHHHHHHTTTCCHHHHH---H-----
T ss_pred             cccCCCccCEEEEEEECCEEEEEEccCceEEEEEcCCCCceEEECCCCCCCCCHHHHHHHHHcCCCeeecc---C-----
Confidence            01235899999999999999999999999999976622234799999999999999999999999752211   0     


Q ss_pred             CCCCCCCccCCCCCCeeeeecCccCcceeeccCCCCcccc-------------ceeEecccEEE-EEcCCCCeEEEEEcC
Q 014765          223 IQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDSTAEK-------------IGVVAVPEVSV-VQLTPNHLFFVVASD  288 (419)
Q Consensus       223 ~~~~~~~~~~~~~p~r~~~~~g~~~GlaltRalGd~~~k~-------------~~v~~~Pdi~~-~~l~~~d~fLILaSD  288 (419)
                                          ..+.+++++|||||+..+|.             ++++++||+.. ++|.++|.|||||||
T Consensus       231 --------------------~r~~g~l~vtRalGd~~~k~~~~~~~~~~~~~~~~v~~~Pdv~~~~~l~~~d~flvLaSD  290 (401)
T 2j4o_A          231 --------------------VGIICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSE  290 (401)
T ss_dssp             --------------------HCCBTTBCCSBCEECHHHHHSGGGSTTTTTCSSCSSBCCCEEEEEEECTTCCEEEEEECH
T ss_pred             --------------------ccccCCcccccccCCHhhcccccccccccccCCCCeeccceEEEeEEeCCCCcEEEEEcc
Confidence                                11223478999999986652             56899999996 999999999999999


Q ss_pred             CCCCCC--------CHHHHHHHHHc----cCCHHHHHHHHHHHHHHHHhc--cCCC--------CCCeEEEEEEeCCC
Q 014765          289 GVFEFL--------SSQAVVDMAAK----YTDARDACAAIAGESYKLWLE--NENR--------TDDITIIIVHIKDF  344 (419)
Q Consensus       289 Glwd~l--------s~~ei~~iv~~----~~~~~~aa~~L~~~A~~~~~~--~~g~--------~DNiTvIvV~l~~~  344 (419)
                      ||||+|        +++++++++..    ..+++++|+.|++.|+++|..  .+|+        .||||||||+|...
T Consensus       291 Glwd~l~~~~~~~~s~~ei~~~v~~~l~~~~~~~~~a~~Lv~~A~~~~~~a~~~G~~~~~~~~~~DNiTvivv~~~~~  368 (401)
T 2j4o_A          291 GLYKALEAAHGPGQANQEIAAMIDTEFAKQTSLDAVAQAVVDRVKRIHSDTFASGGERARFCPRHEDMTLLVRNFGYP  368 (401)
T ss_dssp             HHHHHHHHHHCTTCHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHSCSSGGGGCSEECCEEEEEEEEBCC
T ss_pred             chhhcccccccCCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhhhhhhhcCCcccccCCCCCCeEEEEEEcCCC
Confidence            999999        89999999986    378999999999999986632  2454        89999999999853


No 10 
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=100.00  E-value=1.8e-44  Score=365.21  Aligned_cols=253  Identities=29%  Similarity=0.448  Sum_probs=206.1

Q ss_pred             eEEEEEecccCCCCCCCCCCcchhhhhccccCCCCeEEEEEEeCCCcchHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHH
Q 014765           50 LEYSVLTQRGYYPDSPDKENQDSYCIKTHVQGSPNVHFFGVFDGHGQFGTQCSNFVQQRLVEELANNPMLLDDPVKAYDS  129 (419)
Q Consensus        50 ~~~~~~s~~G~~~~~~R~~NED~~~v~~~~~~~~~~~l~~V~DGhGg~G~~aS~~a~~~l~~~l~~~~~~~~~~~~~l~~  129 (419)
                      +.+++.|++|.     |+.|||++++...   .++..+|+||||||  |..+++++.+.+.+.+.+......++.++|++
T Consensus       122 ~~~g~~s~~G~-----R~~NED~~~~~~~---~~~~~l~~VaDG~G--G~~~g~~as~~~~~~l~~~~~~~~~~~~~l~~  191 (389)
T 4da1_A          122 ENVGCASQIGK-----RKENEDRFDFAQL---TDEVLYFAVYDGHG--GPAAADFCHTHMEKCIMDLLPKEKNLETLLTL  191 (389)
T ss_dssp             GGCEEEEECTT-----SSSCCEEEEEEEC---SSSEEEEEEEEEES--STHHHHHHHHHHHHHHHHHTTTCCCHHHHHHH
T ss_pred             eeEEEecCCCC-----CCCCcceeeeeec---CCCEEEEEEEECCC--CHHHHHHHHHHHHHHHHHHhccccCHHHHHHH
Confidence            45789999998     9999999987532   36788999999999  55555555555555554433334568899999


Q ss_pred             HHHHHHHhhhcc-----CCCCCCCCceEEEEEEECC-EEEEEEcCCCcEEEEEecCCeEEEEccCCCCCCCChhHHHHHH
Q 014765          130 AFLTVNAELHSS-----EIDDTMSGTTAITVLVVGD-KIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVK  203 (419)
Q Consensus       130 af~~~~~~l~~~-----~~~~~~~GtT~~~v~i~~~-~l~vanvGDSRa~l~~~~g~~~~~~~LS~dH~~~~~~E~~RI~  203 (419)
                      +|..+|+.+...     ......+|||++++++.++ ++|+|||||||+|+++ ++.   .++||.||++.++.|++||.
T Consensus       192 a~~~~n~~i~~~~~~~~~~~~~~~GtT~~~~li~~~~~l~vanvGDSRayl~r-~g~---~~~LT~DHs~~~~~E~~Ri~  267 (389)
T 4da1_A          192 AFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCR-KGK---PMKLTIDHTPERKDEKERIK  267 (389)
T ss_dssp             HHHHHHHHHHHHHHHSSCGGGGGCEECEEEEEEETTTEEEEEEESSCEEEEEE-TTE---EEECCCCCCTTSHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhccccccCCCCCeEEEEEEEcCCeEEEEEeeccEEEEEE-CCE---eEEeCCCCCCCCHHHHHHHH
Confidence            999999999751     1223458999999999876 9999999999999995 554   58999999999999999999


Q ss_pred             HcCCeEeecccccCCCCCCCCCCCCCccCCCCCCeeeeecCccCc-ceeeccCCCCccccceeEecccEEEEEcCCC-Ce
Q 014765          204 VCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPG-TAFTRSVGDSTAEKIGVVAVPEVSVVQLTPN-HL  281 (419)
Q Consensus       204 ~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~g~~~G-laltRalGd~~~k~~~v~~~Pdi~~~~l~~~-d~  281 (419)
                      ++||.+.....                           ...+.+| +++||+||+..+|.++++++|++..+++.++ |.
T Consensus       268 ~~gG~v~~~~~---------------------------~~~~~~g~l~ltRalGd~~~k~~~v~~~pdi~~~~l~~~~dd  320 (389)
T 4da1_A          268 KCGGFVAWNSL---------------------------GQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDS  320 (389)
T ss_dssp             HHTCCEECC------------------------------CCEETTTBSCSBCEECGGGGGGTCBCCCEEEEEECCSSSCE
T ss_pred             HcCCeEecccC---------------------------CCccCCCeEeeEeeeCChhhccCCCCCCCceEEEEEcCCCCc
Confidence            99998853210                           0112222 7899999999999888999999999999976 67


Q ss_pred             EEEEEcCCCCCCCCHHHHHHHHHccCCHHHHHHHHHHHHHHHHhccCCCCCCeEEEEEEeCCCCCCC
Q 014765          282 FFVVASDGVFEFLSSQAVVDMAAKYTDARDACAAIAGESYKLWLENENRTDDITIIIVHIKDFSNLP  348 (419)
Q Consensus       282 fLILaSDGlwd~ls~~ei~~iv~~~~~~~~aa~~L~~~A~~~~~~~~g~~DNiTvIvV~l~~~~~~~  348 (419)
                      |||||||||||+|+++++++++....+++++|+.|++.|+.     +|+.||+|||||+|....+..
T Consensus       321 ~llL~SDGL~d~l~~~ei~~il~~~~~~~~~a~~Lv~~A~~-----~g~~DNiTvivv~~~~~~~~~  382 (389)
T 4da1_A          321 FLVLTTDGINFMVNSQEICDFVNQCHDPNEAAHAVTEQAIQ-----YGTEDNSTAVVVPFGAWGKYK  382 (389)
T ss_dssp             EEEEECHHHHTTCCHHHHHHHHHHSSSHHHHHHHHHHHHHH-----HTCCSCEEEEEEEECCC----
T ss_pred             EEEEEeCCcccCCCHHHHHHHHHhcCCHHHHHHHHHHHHHH-----cCCCCCeEEEEEEecCCCCCC
Confidence            89999999999999999999999888999999999999999     799999999999999766554


No 11 
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=100.00  E-value=1.1e-44  Score=362.96  Aligned_cols=246  Identities=20%  Similarity=0.306  Sum_probs=202.5

Q ss_pred             EecccCCCCCCCC---CCcchhhhhccccCCCCeEEEEEEeCCCcchHHHHHHHHHHHHHHHhcC---C-CCCCcHHHHH
Q 014765           55 LTQRGYYPDSPDK---ENQDSYCIKTHVQGSPNVHFFGVFDGHGQFGTQCSNFVQQRLVEELANN---P-MLLDDPVKAY  127 (419)
Q Consensus        55 ~s~~G~~~~~~R~---~NED~~~v~~~~~~~~~~~l~~V~DGhGg~G~~aS~~a~~~l~~~l~~~---~-~~~~~~~~~l  127 (419)
                      ++.+|+     |.   .|||++++..   ..++..||+||||||  |..||+++.+.+.+.+.+.   . ....++.++|
T Consensus        25 ~~~~G~-----r~~~~~nED~~~~~~---~~~~~~lf~V~DGhG--G~~aa~~as~~l~~~l~~~~l~~~~~~~~~~~~l   94 (358)
T 2irm_A           25 YKDDGR-----RCEGYESRDKKCLCI---SDNNTSLYAILSGHN--GVTVAENALQEMAAELLLGQLNVCNTDEAVKELI   94 (358)
T ss_dssp             ECSSSC-----EEECSSCCEEEEEEE---CSSSEEEEEEEEEES--CSHHHHHHHHHHHHHSSSSTTTTCCSHHHHHHHH
T ss_pred             eecCCC-----CCCCCCCCceEEEEE---CCCCEEEEEEEcCCC--CHHHHHHHHHHHHHHHHHhhhccccchhhHHHHH
Confidence            667898     65   5999998753   336789999999999  9999999999999998752   1 1223678999


Q ss_pred             HHHHHHHHHhhhccC--------------------------------------CCCCCCCceEEEEEEECCEEEEEEcCC
Q 014765          128 DSAFLTVNAELHSSE--------------------------------------IDDTMSGTTAITVLVVGDKIYVANVGD  169 (419)
Q Consensus       128 ~~af~~~~~~l~~~~--------------------------------------~~~~~~GtT~~~v~i~~~~l~vanvGD  169 (419)
                      +++|..+|+.|....                                      .....+|||++++++.++++|+|||||
T Consensus        95 ~~a~~~~d~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTav~~li~~~~l~vAnvGD  174 (358)
T 2irm_A           95 RQSFMSVEKGYFDSINPHVATKTAIQLHLSADGMNQYEISQQFENVLQKLDSLNNALSVGSSAVLALIHRSHLYLGNIGN  174 (358)
T ss_dssp             HHHHHHHHHHHHHHSHHHHHHHHHHHHTTC---------------CCCTHHHHHTTTTCEEEEEEEEEESSEEEEEEESS
T ss_pred             HHHHHHHHHHHHHHHHhhhhccccccccccccccccccchhhccchhhhcccccCCCCCCCcEEEEEEECCEEEEEEccc
Confidence            999999999886410                                      022359999999999999999999999


Q ss_pred             CcEEEEEec--CCeEEEEccCCCCCCCChhHHHHHHHcCCeEeecccccCCCCCCCCCCCCCccCCCCCCeeeeecCccC
Q 014765          170 SRAVIAVKD--GNRIIAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYP  247 (419)
Q Consensus       170 SRa~l~~~~--g~~~~~~~LS~dH~~~~~~E~~RI~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~g~~~  247 (419)
                      ||+|+++.+  |. +.+++||.||+|.++.|++||.++||.|..                                ++..
T Consensus       175 SRa~l~r~~~~g~-~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~--------------------------------~r~~  221 (358)
T 2irm_A          175 CRALLCKTDEHDT-LTVTQLSVDHNLLNAEEAARLFRLGLMAQN--------------------------------FEGV  221 (358)
T ss_dssp             CEEEEEECCTTCS-CEEEECSCCCBTTSHHHHHHHHTTTCCGGG--------------------------------GTTC
T ss_pred             CeEEEEEecCCCc-eeeEeCCCCCCCCCHHHHHHHHHcCCeEec--------------------------------cCcC
Confidence            999999763  41 236999999999999999999999997632                                2223


Q ss_pred             cceeeccCCCCcccc-------------ceeEecccEEE-EEcCCCCeEEEEEcCCCCCCCC----------HHHHHHHH
Q 014765          248 GTAFTRSVGDSTAEK-------------IGVVAVPEVSV-VQLTPNHLFFVVASDGVFEFLS----------SQAVVDMA  303 (419)
Q Consensus       248 GlaltRalGd~~~k~-------------~~v~~~Pdi~~-~~l~~~d~fLILaSDGlwd~ls----------~~ei~~iv  303 (419)
                      |..+|||||++.+|.             ++++++||+.. ++|.++|.|||||||||||+++          ++++++++
T Consensus       222 g~llTRalGd~~~K~~~~~~~~~~~~~~~~v~~~Pdi~~~~~l~~~d~fllL~SDGl~d~l~~~~~~~~~~~~~ei~~~v  301 (358)
T 2irm_A          222 PLYSTRCIGNYLGKAGYKDCNFLSSATAEPVIFEPEIVGGIQITPACRFLVLMSSGLCRALHEIFPGDASTGNRELVRMI  301 (358)
T ss_dssp             TTCBSBCEECHHHHTTGGGSSSSTTCSSCSSBCCCEEEEEEECCTTEEEEEEECHHHHHHHHHHSCSSSSHHHHHHHHHH
T ss_pred             CEEcccCCcCHHHhccccccccccccCCCCEeccCeEEEEEEeCCCCcEEEEECCCcccCccccccccccccHHHHHHHH
Confidence            445999999987653             47899999995 9999999999999999999999          89999999


Q ss_pred             Hcc----CCHHHHHHHHHHHHHHHHh----------ccCC--CCCCeEEEEEEeCC
Q 014765          304 AKY----TDARDACAAIAGESYKLWL----------ENEN--RTDDITIIIVHIKD  343 (419)
Q Consensus       304 ~~~----~~~~~aa~~L~~~A~~~~~----------~~~g--~~DNiTvIvV~l~~  343 (419)
                      ...    .+++++|+.|++.|++++.          ..+|  +.||||||||+|..
T Consensus       302 ~~~~~~~~~~~~~a~~Lv~~A~~~~~~~~~~~~~~~~~~Gg~~~DNiTvivv~~~~  357 (358)
T 2irm_A          302 SEEFQNQSTLGGVAQSVVHRIVQAHHDTYMQLVEEHRSVTFNSRDDVTLLIRNFNY  357 (358)
T ss_dssp             HHHTTTCCSHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCCCEECCEEEEEEESCC
T ss_pred             HHHHhcCCCHHHHHHHHHHHHHHhhhhhhccccccccccCCCCCCCeEEEEEeCCC
Confidence            864    6899999999999987542          1146  89999999999863


No 12 
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=100.00  E-value=1.5e-44  Score=363.78  Aligned_cols=249  Identities=22%  Similarity=0.317  Sum_probs=204.5

Q ss_pred             ceeEEEEEecccCCCCCCCCCC-----cchhhhhccccCCCCeEEEEEEeCCCcchHHHHHHHHHHHHHHHhcCCCCCCc
Q 014765           48 FNLEYSVLTQRGYYPDSPDKEN-----QDSYCIKTHVQGSPNVHFFGVFDGHGQFGTQCSNFVQQRLVEELANNPMLLDD  122 (419)
Q Consensus        48 ~~~~~~~~s~~G~~~~~~R~~N-----ED~~~v~~~~~~~~~~~l~~V~DGhGg~G~~aS~~a~~~l~~~l~~~~~~~~~  122 (419)
                      -++.|+..|++|+     |+.|     ||++++...+...++..||+||||||  |..||+++.+.+.+.+.+..   ..
T Consensus        11 ~~~~~~~~s~~G~-----R~~~ED~~neD~~~~~~~~~~~~~~~lf~V~DGhG--G~~aa~~as~~l~~~l~~~~---~~   80 (377)
T 3d8k_A           11 GRTVCASATSRNR-----RPTSESPHSDDVVVVEGMLRGRPETRVHAMFDGFQ--GRHSAMWLAQNVMNYLNDLR---DV   80 (377)
T ss_dssp             HHHHHHHTTTCEE-----EEEECC---CEEEEEEEECSSCTTEEEEEEEEBSS--SSHHHHHHHHHHHHHHTTCS---SS
T ss_pred             CcEEEEEEEccCC-----CCccccchhcceEEEecccCCCCCeEEEEEEcCCC--cHHHHHHHHHHHHHHHHHhc---cc
Confidence            3456788999999     6665     55555554444557889999999999  99999999999999997643   23


Q ss_pred             HHHHHHHHHHHHHHhhhccCCCCCCCCceEEEEEEE--------------------------------------------
Q 014765          123 PVKAYDSAFLTVNAELHSSEIDDTMSGTTAITVLVV--------------------------------------------  158 (419)
Q Consensus       123 ~~~~l~~af~~~~~~l~~~~~~~~~~GtT~~~v~i~--------------------------------------------  158 (419)
                      +.++|+++|..+|++|.....   .+|||++++++.                                            
T Consensus        81 ~~~al~~af~~~d~~l~~~~~---~~GtTa~~~~i~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~g~ta~a~vali~~~  157 (377)
T 3d8k_A           81 NEEEITRQFERMDGDLRAANL---PGGSSALIIFVRYEKKPTEARVVGRQIVPEGAKEFTSVAEALGGPLMPVVAMNFRR  157 (377)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTC---CCCBCEEEEEEEEESSCCCEEEETTEEECCC---CCCHHHHSSCCCCCCEEECGGG
T ss_pred             HHHHHHHHHHHHHHHHHhccc---CCCCceEEEEEeccccccccccccccccccccccccccccccccccccceeeeccc
Confidence            578999999999999987432   489999998885                                            


Q ss_pred             -------CCEEEEEEcCCCcEEEEEecCCeEEEEccCCCCCCCChhHHHHHHHcCCeEeecccccCCCCCCCCCCCCCcc
Q 014765          159 -------GDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPNIQTWGDEES  231 (419)
Q Consensus       159 -------~~~l~vanvGDSRa~l~~~~g~~~~~~~LS~dH~~~~~~E~~RI~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~  231 (419)
                             ++++|+|||||||+|+++ +|.   +++||.||+|.++.|++||.++||.+...                   
T Consensus       158 ~p~~~~~~~~l~vanvGDSRa~l~r-~g~---~~~LT~DH~~~~~~E~~RI~~~gg~v~~~-------------------  214 (377)
T 3d8k_A          158 DPRAAKGIYTIHVASLGNSRCVLKS-GRT---AIHLSTPHTASSHKERHRVQAAGGVFTTV-------------------  214 (377)
T ss_dssp             CGGGTTCEEEEEEEEESSCEEEEEE-TTE---EEESSCCCSSSSHHHHHHHHTTTCCEEEC-------------------
T ss_pred             ccccccCCCeEEEEEcccceEEEEE-CCE---EEECCcCCCCCCHHHHHHHHHcCCEEEec-------------------
Confidence                   148999999999999995 554   69999999999999999999999987421                   


Q ss_pred             CCCCCCeeeeecCccCcceeeccCCCCcccc--------ceeEecccEEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHH
Q 014765          232 QGGDPPRLWVQNGMYPGTAFTRSVGDSTAEK--------IGVVAVPEVSVVQLTPNHLFFVVASDGVFEFLSSQAVVDMA  303 (419)
Q Consensus       232 ~~~~p~r~~~~~g~~~GlaltRalGd~~~k~--------~~v~~~Pdi~~~~l~~~d~fLILaSDGlwd~ls~~ei~~iv  303 (419)
                           .+.|..+|   ++++|||||+..+|.        ++++++|++..++|+++|. ||||||||||+|+++++++++
T Consensus       215 -----~g~~rv~G---~l~vtRalGd~~~k~~~~~~~~~~~v~~~Pdv~~~~l~~~D~-llL~SDGl~d~ls~~e~v~~v  285 (377)
T 3d8k_A          215 -----NGELLLGG---VVPMTRAFGSFDFKKGGQGKLQQDLVSAVPDVTTFFAYPGDD-IVAGTAGAFAHFRSHAAIAAA  285 (377)
T ss_dssp             -----SSSEEETT---TBSCSBCSSCGGGSCC---CCSSCSSBCCCEEEEEEECTTCE-EEEECGGGGCSCSSHHHHHHH
T ss_pred             -----CCcEEEcC---ceecceeecChhhhcccccccccCccccCCcEEEEEcCCCCE-EEEEECCcccCCCcHHHHHHH
Confidence                 01111222   389999999998774        5688999999999999986 799999999999999998865


Q ss_pred             Hc-----cCCHHHHHHHHHHHHHHHHhccCCCCCCeEEEEEEeCCCCC
Q 014765          304 AK-----YTDARDACAAIAGESYKLWLENENRTDDITIIIVHIKDFSN  346 (419)
Q Consensus       304 ~~-----~~~~~~aa~~L~~~A~~~~~~~~g~~DNiTvIvV~l~~~~~  346 (419)
                      ..     ..+++++|+.|++.|++     +|+.||+|||||+|...+.
T Consensus       286 ~~~~~~~~~~~~~~a~~Lv~~A~~-----~g~~DNiTvivv~~~~~~~  328 (377)
T 3d8k_A          286 IALYPVSPETVLDAAKAMVVNAKR-----RKVTKNISTFVRHLPESRT  328 (377)
T ss_dssp             HTTSCCCGGGHHHHHHHHHHTTTT-----SSCCSCCCEEEEECCSSCC
T ss_pred             HHHhhccCCCHHHHHHHHHHHHHh-----cCCCCCEEEEEEEecCCcc
Confidence            54     45899999999999998     8999999999999986554


No 13 
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=100.00  E-value=2.6e-43  Score=363.58  Aligned_cols=258  Identities=28%  Similarity=0.346  Sum_probs=196.6

Q ss_pred             EEEEEecccCCCCCCCCCCcchhhhhccccCCCCeEEEEEEeCCCcchHHHHHHHHHHHHHHHhcC--------------
Q 014765           51 EYSVLTQRGYYPDSPDKENQDSYCIKTHVQGSPNVHFFGVFDGHGQFGTQCSNFVQQRLVEELANN--------------  116 (419)
Q Consensus        51 ~~~~~s~~G~~~~~~R~~NED~~~v~~~~~~~~~~~l~~V~DGhGg~G~~aS~~a~~~l~~~l~~~--------------  116 (419)
                      -..+.|++|.    .|+.|||++.+...+.  .+..|||||||||  |..||+++.+.+.+.+...              
T Consensus        38 v~~~~s~~g~----~R~~nED~~~v~~~~~--~~~~lfgVfDGHG--G~~aa~~as~~L~~~i~~~l~~~~~l~~~~~~~  109 (467)
T 2pnq_A           38 ILGFDSNRLP----ANAPIEDRRSATTCLQ--TRGMLLGVFDGHA--GCACSQAVSERLFYYIAVSLLPHETLLEIENAV  109 (467)
T ss_dssp             EEEEEEEEEC----CSSSCCEEEEEEEESS--SSCEEEEEEEEES--SSHHHHHHHHHHHHHHHHHHCCHHHHHHHHTTT
T ss_pred             eEEEEeeccC----CCCCCCCceeeeeccC--CCcEEEEEECCCC--CHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhh
Confidence            3455677776    5999999998764332  4678999999999  7777777777766554310              


Q ss_pred             ----------------CCC-----------------------------CCcHHHHHHHHHHHHHHhhhccCC--------
Q 014765          117 ----------------PML-----------------------------LDDPVKAYDSAFLTVNAELHSSEI--------  143 (419)
Q Consensus       117 ----------------~~~-----------------------------~~~~~~~l~~af~~~~~~l~~~~~--------  143 (419)
                                      .++                             ..++.++|+++|..+|..|.....        
T Consensus       110 ~~~~~~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~aL~~af~~~d~~i~~~~~~~~~~~~~  189 (467)
T 2pnq_A          110 ESGRALLPILQWHKHPNDYFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFL  189 (467)
T ss_dssp             C----CCCCEEECCCTTCCCCSTTHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHCCSSHHH
T ss_pred             hccccccccccccccccccchhhhhhhhhcchhhhhhhhccccccccchhhHHHHHHHHHHHHHHHHHHhhhhccccccc
Confidence                            010                             116789999999999999875211        


Q ss_pred             -----CCCCCCceEEEEEEECCEEEEEEcCCCcEEEEEec--CCeEEEEccCCCCCCCChhHHHHHHHcCCeEeeccccc
Q 014765          144 -----DDTMSGTTAITVLVVGDKIYVANVGDSRAVIAVKD--GNRIIAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVE  216 (419)
Q Consensus       144 -----~~~~~GtT~~~v~i~~~~l~vanvGDSRa~l~~~~--g~~~~~~~LS~dH~~~~~~E~~RI~~~Gg~v~~~~~~~  216 (419)
                           ....+|||++++++.++++|+|||||||+|+++.+  | .+.+++||.||++.++.|++||.++|+..-  ++  
T Consensus       190 ~~~~~~~~~~GtTa~v~li~~~~l~vAnvGDSRa~l~r~~~~g-~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~--~~--  264 (467)
T 2pnq_A          190 NYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDG-SWSAVTLSNDHNAQNERELQRLKLEHPKNE--AK--  264 (467)
T ss_dssp             HHHHHHHHHSEECEEEEEEETTEEEEEEESSCEEEEEEECTTS-CEEEEECCCCCSTTCHHHHHHHHHTSCGGG--HH--
T ss_pred             ccccccCCCCcceEEEEEEECCEEEEEECCCceEEEEEecCCC-cEEEEECCCCCCCCCHHHHHHHHHcCCCcc--cc--
Confidence                 22459999999999999999999999999999763  4 245799999999999999999999986321  00  


Q ss_pred             CCCCCCCCCCCCCccCCCCCCeeeeecCccCc-ceeeccCCCCcccc--------------------------------c
Q 014765          217 GLKDPNIQTWGDEESQGGDPPRLWVQNGMYPG-TAFTRSVGDSTAEK--------------------------------I  263 (419)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~p~r~~~~~g~~~G-laltRalGd~~~k~--------------------------------~  263 (419)
                                            .+..++++.| +++||||||..+|.                                +
T Consensus       265 ----------------------~~~~~~Rv~G~l~vtRAlGd~~~K~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p  322 (467)
T 2pnq_A          265 ----------------------SVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPP  322 (467)
T ss_dssp             ----------------------HHBSSSSBTTTBSSSBCEECGGGTSCHHHHHHHHSSSCC-----------CTTCSSSC
T ss_pred             ----------------------eeEecCccccccccchhcCchhhcccchhhhhhhcccccccccccccccccccccCCC
Confidence                                  0112445556 89999999997662                                3


Q ss_pred             eeEecccEEEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHHccC------CH----------------------------
Q 014765          264 GVVAVPEVSVVQLTPNHLFFVVASDGVFEFLSSQAVVDMAAKYT------DA----------------------------  309 (419)
Q Consensus       264 ~v~~~Pdi~~~~l~~~d~fLILaSDGlwd~ls~~ei~~iv~~~~------~~----------------------------  309 (419)
                      +++++|++..++|.++|.|||||||||||+|+++|+++++....      +|                            
T Consensus       323 ~v~~~Pdv~~~~l~~~D~fLVLaSDGLwd~ls~~eiv~iv~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~r~~~~~~~~  402 (467)
T 2pnq_A          323 YLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVF  402 (467)
T ss_dssp             CCBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCSSCC-----------------------------
T ss_pred             cccccceEEEEEcCCCCeEEEEEecCccccCChHHHHHHHHHHHhhccccCcccccccCccHHHHHHHHHHhhhcccCCc
Confidence            48999999999999999999999999999999999999997642      33                            


Q ss_pred             --HHHHHHHHHHHHHHHh------------------ccCCCCCCeEEEEEEeCC
Q 014765          310 --RDACAAIAGESYKLWL------------------ENENRTDDITIIIVHIKD  343 (419)
Q Consensus       310 --~~aa~~L~~~A~~~~~------------------~~~g~~DNiTvIvV~l~~  343 (419)
                        +.+|..|++.|+..+.                  ..+...||||||||+|+.
T Consensus       403 ~~~naA~~Lir~Al~~~~~Ge~~~~~~~~ll~~~~~~~R~~~DdITViVv~~~~  456 (467)
T 2pnq_A          403 EDQNAATHLIRHAVGNNEFGAVDHERLSKMLSLPEELARMYRDDITIIVVQFNS  456 (467)
T ss_dssp             --CCHHHHHHHHHHC-------------------------CCSCEEEEEEEECH
T ss_pred             hhhHHHHHHHHHHhcCCCcCcchHHHHHhhhcCCccccccCCCCcEEEEEEeCc
Confidence              5578899999987430                  002258999999999963


No 14 
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=100.00  E-value=4e-40  Score=312.82  Aligned_cols=238  Identities=24%  Similarity=0.290  Sum_probs=192.5

Q ss_pred             eeEEEEEecccCCCCCCCCCCcchhhhhccccCCCCeEEEEEEeCCCcc--hHHHHHHHHHHHH-HHHhcCCCCCCcHHH
Q 014765           49 NLEYSVLTQRGYYPDSPDKENQDSYCIKTHVQGSPNVHFFGVFDGHGQF--GTQCSNFVQQRLV-EELANNPMLLDDPVK  125 (419)
Q Consensus        49 ~~~~~~~s~~G~~~~~~R~~NED~~~v~~~~~~~~~~~l~~V~DGhGg~--G~~aS~~a~~~l~-~~l~~~~~~~~~~~~  125 (419)
                      .|++++.|++|.    .|+.|||++++....   ++..+|+|||||||+  |..||+++.+.|. +++........++.+
T Consensus         5 ~~~~~~~s~~G~----~r~~neD~~~~~~~~---~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~   77 (250)
T 2pk0_A            5 YMEISLLTDIGQ----RRSNNQDFINQFENK---AGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAETDFSELSEIRD   77 (250)
T ss_dssp             CEEEEEEEECCT----TCSCCCEEEEEEECT---TCCEEEEEEEEECTTTHHHHHHHHHHHHHHHHHTTCCCCSHHHHHH
T ss_pred             eEEEEEecCCCC----CCCcCCCceEeccCC---CCcEEEEEEeCCCCcHHHHHHHHHHHHHHHHHHhhcccCChhhHHH
Confidence            468899999998    599999999886542   467899999999987  7788888888887 443332211345778


Q ss_pred             HHHHHHHHHHHhhhccC--CCCCCCCceEEEEEEECCEEEEEEcCCCcEEEEEecCCeEEEEccCCCCCCCChhHHHHHH
Q 014765          126 AYDSAFLTVNAELHSSE--IDDTMSGTTAITVLVVGDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVK  203 (419)
Q Consensus       126 ~l~~af~~~~~~l~~~~--~~~~~~GtT~~~v~i~~~~l~vanvGDSRa~l~~~~g~~~~~~~LS~dH~~~~~~E~~RI~  203 (419)
                      +|.++|..+|+.|....  .....+|||++++++.+++++++|+||||+|+++ ++.   .++||.||++..+     +.
T Consensus        78 ~l~~~~~~~~~~l~~~~~~~~~~~~gtT~~~~~i~~~~l~~anvGDsr~~l~r-~g~---~~~lt~dh~~~~~-----~~  148 (250)
T 2pk0_A           78 WMLVSIETENRKIYELGQSDDYKGMGTTIEAVAIVGDNIIFAHVGDSRIGIVR-QGE---YHLLTSDHSLVNE-----LV  148 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCTTCEECEEEEEEETTEEEEEEESSCEEEEEE-TTE---EEECCCCCBHHHH-----HH
T ss_pred             HHHHHHHHHHHHHHHHHhhCCCCCCcceEEEEEEECCeEEEEEeCCCeEEEEc-CCc---EEEeCCCCCHHHH-----HH
Confidence            99999999999997621  1135689999999999999999999999999996 454   5899999998643     34


Q ss_pred             HcCCeEeecccccCCCCCCCCCCCCCccCCCCCCeeeeecCccCcceeeccCCCCccccceeEecccEEEEEcCCCCeEE
Q 014765          204 VCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQLTPNHLFF  283 (419)
Q Consensus       204 ~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~g~~~GlaltRalGd~~~k~~~v~~~Pdi~~~~l~~~d~fL  283 (419)
                      +.|+  ++.+++..+                 |.+          +++||+||+..      .++|++..+++.++|. |
T Consensus       149 ~~g~--i~~~~~~~~-----------------~~~----------~~ltralG~~~------~~~p~~~~~~l~~gd~-l  192 (250)
T 2pk0_A          149 KAGQ--LTEEEAASH-----------------PQK----------NIITQSIGQAN------PVEPDLGVHLLEEGDY-L  192 (250)
T ss_dssp             HTTS--SCHHHHHTC-----------------CSC----------CCBSCCBSCSS------CCCCEEEEEECCTTCE-E
T ss_pred             HcCC--CCHHHHHhC-----------------CCc----------ceEEeecCCCC------CccceEEEEEcCCCCE-E
Confidence            4453  333333332                 333          67999999985      5789999999999986 7


Q ss_pred             EEEcCCCCCCCCHHHHHHHHHccCCHHHHHHHHHHHHHHHHhccCCCCCCeEEEEEEeCC
Q 014765          284 VVASDGVFEFLSSQAVVDMAAKYTDARDACAAIAGESYKLWLENENRTDDITIIIVHIKD  343 (419)
Q Consensus       284 ILaSDGlwd~ls~~ei~~iv~~~~~~~~aa~~L~~~A~~~~~~~~g~~DNiTvIvV~l~~  343 (419)
                      |||||||||+++++++.+++....+++++|+.|++.|+.     +++.||+|||||++..
T Consensus       193 ll~SDGl~d~l~~~~i~~~~~~~~~~~~~a~~L~~~a~~-----~g~~DniTvivv~~~~  247 (250)
T 2pk0_A          193 VVNSDGLTNMLSNADIATVLTQEKTLDDKNQDLITLANH-----RGGLDNITVALVYVES  247 (250)
T ss_dssp             EEECHHHHTTSCHHHHHHHHTSSSCHHHHHHHHHHHHHH-----TTCCSCEEEEEEEECC
T ss_pred             EEECCCCCCCcCHHHHHHHHhcCCCHHHHHHHHHHHHHH-----cCCCCCeEEEEEEeeC
Confidence            999999999999999999998877999999999999998     8899999999999974


No 15 
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=100.00  E-value=8.4e-40  Score=308.18  Aligned_cols=230  Identities=20%  Similarity=0.363  Sum_probs=181.8

Q ss_pred             CceeEEEEEecccCCCCCCCCCCcchhhhhccccCCCCeEEEEEEeCCCcc--hHHHHHHHHHHHHHHHhcCCCCCCcHH
Q 014765           47 NFNLEYSVLTQRGYYPDSPDKENQDSYCIKTHVQGSPNVHFFGVFDGHGQF--GTQCSNFVQQRLVEELANNPMLLDDPV  124 (419)
Q Consensus        47 ~~~~~~~~~s~~G~~~~~~R~~NED~~~v~~~~~~~~~~~l~~V~DGhGg~--G~~aS~~a~~~l~~~l~~~~~~~~~~~  124 (419)
                      .++++|+..|++|+    .|+.|||++++.        ..+|+|||||||+  |..||+.+.+.|.+.+...+  ..++.
T Consensus         2 ~~~~~~~~~s~~G~----~r~~nED~~~~~--------~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~--~~~~~   67 (237)
T 1txo_A            2 TLVLRYAARSDRGL----VRANNEDSVYAG--------ARLLALADGMGGHAAGEVASQLVIAALAHLDDDEP--GGDLL   67 (237)
T ss_dssp             -CEEEEEEEEECCS----SCSSCCEEEEEC--------SSEEEEEEEECTTTHHHHHHHHHHHHHGGGGSSCC--CSCHH
T ss_pred             ceEEEEEEecCCCC----CCCcCCCccccC--------CCEEEEEeCCCCcHHHHHHHHHHHHHHHHHhhhCC--chhHH
Confidence            36789999999997    499999999752        3599999999965  55555555555544433222  24688


Q ss_pred             HHHHHHHHHHHHhhhcc---CCCCCCCCceEEEEEEECCEEEEEEcCCCcEEEEEecCCeEEEEccCCCCCCCChhHHHH
Q 014765          125 KAYDSAFLTVNAELHSS---EIDDTMSGTTAITVLVVGDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYER  201 (419)
Q Consensus       125 ~~l~~af~~~~~~l~~~---~~~~~~~GtT~~~v~i~~~~l~vanvGDSRa~l~~~~g~~~~~~~LS~dH~~~~~~E~~R  201 (419)
                      ++|.++|..+|..+...   ......+|||++++++.+++++++|+||||+|+++ ++.   ..+||.||++..     +
T Consensus        68 ~~l~~a~~~~~~~i~~~~~~~~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~~l~r-~g~---~~~lt~dh~~~~-----~  138 (237)
T 1txo_A           68 AKLDAAVRAGNSAIAAQVEMEPDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLR-DGE---LTQITKDDTFVQ-----T  138 (237)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCGGGTTCEECEEEEEEETTEEEEEEESSCEEEEEE-TTE---EEECSCCCBHHH-----H
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCCCCCCcceEEEEEEECCEEEEEEEccCcEEEEe-CCE---eEEeCCCCCHHH-----H
Confidence            99999999999998752   22234589999999999999999999999999995 454   589999999753     3


Q ss_pred             HHHcCCeEeecccccCCCCCCCCCCCCCccCCCCCCeeeeecCccCcceeeccCCCCccccceeEecccEEEEEcCCCCe
Q 014765          202 VKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQLTPNHL  281 (419)
Q Consensus       202 I~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~g~~~GlaltRalGd~~~k~~~v~~~Pdi~~~~l~~~d~  281 (419)
                      +.+.|.  +..+++..                 +|.+          ..+||+||+.       ..+|++..+++.++|.
T Consensus       139 ~~~~G~--i~~~~~~~-----------------~~~~----------~~~tr~lg~~-------~~~p~~~~~~l~~~d~  182 (237)
T 1txo_A          139 LVDEGR--ITPEEAHS-----------------HPQR----------SLIMRALTGH-------EVEPTLTMREARAGDR  182 (237)
T ss_dssp             HHHTTS--SCTTGGGG-----------------CTTT----------TCBCCCBSSS-------CCCCEEEEEECCTTCE
T ss_pred             HHHcCC--CCHHHHhh-----------------Cccc----------cceeeccCCC-------CccceEEEEecCCCCE
Confidence            445553  33333332                 2333          4699999975       4789999999999998


Q ss_pred             EEEEEcCCCCCCCCHHHHHHHHHccCCHHHHHHHHHHHHHHHHhccCCCCCCeEEEEEEeC
Q 014765          282 FFVVASDGVFEFLSSQAVVDMAAKYTDARDACAAIAGESYKLWLENENRTDDITIIIVHIK  342 (419)
Q Consensus       282 fLILaSDGlwd~ls~~ei~~iv~~~~~~~~aa~~L~~~A~~~~~~~~g~~DNiTvIvV~l~  342 (419)
                       ||||||||||+++++++.+++.. .+++++|+.|++.|+.     +|+.||+|||||+|.
T Consensus       183 -lvl~SDGl~d~l~~~~i~~~~~~-~~~~~~a~~L~~~a~~-----~g~~DniTvivv~~~  236 (237)
T 1txo_A          183 -YLLCSDGLSDPVSDETILEALQI-PEVAESAHRLIELALR-----GGGPDNVTVVVADLE  236 (237)
T ss_dssp             -EEEECHHHHTTSCHHHHHHHHTS-SSHHHHHHHHHHHHHH-----TTCCSCEEEEEEEEE
T ss_pred             -EEEECCCCCCCCCHHHHHHHHhc-CCHHHHHHHHHHHHHH-----cCCCCCeEEEEEEee
Confidence             58999999999999999999975 5899999999999998     899999999999986


No 16 
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=100.00  E-value=3.5e-39  Score=304.28  Aligned_cols=232  Identities=25%  Similarity=0.407  Sum_probs=179.6

Q ss_pred             eEEEEEecccCCCCCCCCCCcchhhhhccccCCCCeEEEEEEeCCCcc--hHHHHHHHHHHHHHHHhcCC-CCCCcHHHH
Q 014765           50 LEYSVLTQRGYYPDSPDKENQDSYCIKTHVQGSPNVHFFGVFDGHGQF--GTQCSNFVQQRLVEELANNP-MLLDDPVKA  126 (419)
Q Consensus        50 ~~~~~~s~~G~~~~~~R~~NED~~~v~~~~~~~~~~~l~~V~DGhGg~--G~~aS~~a~~~l~~~l~~~~-~~~~~~~~~  126 (419)
                      |+|++.|++|.    .|+.|||++ +...   ..+. +|+|||||||+  |..||+++.+.|.+.+.... .+..++.++
T Consensus         1 ~~~~~~s~~G~----~r~~neD~~-~~~~---~~~~-~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~   71 (240)
T 2j82_A            1 MDVAGLTDCGL----IRKSNQDAF-YIDE---KHQR-FFIVADGMGGHAGGEEASRLAVDHIRQYLETHLEDLQHDPVTL   71 (240)
T ss_dssp             CEEEEEEECCS----SCSSCCEEE-EECT---TTCC-EEEEEEBC---CHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHH
T ss_pred             CeEEEeCCCCC----CCCcCCCcc-EecC---CCCe-EEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcccccchhHHHH
Confidence            57899999998    599999999 6533   1345 99999999987  88899999988887765421 113467889


Q ss_pred             HHHHHHHHHHhhhccCC---CCCCCCceEEEEEEE--CCEEEEEEcCCCcEEEEEecCCeEEEEccCCCCCCCChhHHHH
Q 014765          127 YDSAFLTVNAELHSSEI---DDTMSGTTAITVLVV--GDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYER  201 (419)
Q Consensus       127 l~~af~~~~~~l~~~~~---~~~~~GtT~~~v~i~--~~~l~vanvGDSRa~l~~~~g~~~~~~~LS~dH~~~~~~E~~R  201 (419)
                      |.++|..+|+.+.....   ....+|||++++++.  +++++++|+||||+|+++ ++.   ..+||.||++..+     
T Consensus        72 l~~~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~i~~~~~~l~~anvGDsr~~l~r-~~~---~~~lt~dh~~~~~-----  142 (240)
T 2j82_A           72 LRQAFLAANHAIVEQQRQNSARADMGTTAVVILLDEKGDRAWCAHVGDSRIYRWR-KDQ---LQQITSDHTWIAQ-----  142 (240)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCSCTTCCBCEEEEEECTTSSEEEEEEESSCEEEEEE-TTE---EEECSCCCBHHHH-----
T ss_pred             HHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEEecCCEEEEEEEccCceEEEe-CCE---EEEECCCCcHHHH-----
Confidence            99999999999986221   234589999999999  999999999999999995 454   5899999998643     


Q ss_pred             HHHcCCeEeecccccCCCCCCCCCCCCCccCCCCCCeeeeecCccCcceeeccCCCCccccceeEecccEEEEEcCCCCe
Q 014765          202 VKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQLTPNHL  281 (419)
Q Consensus       202 I~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~g~~~GlaltRalGd~~~k~~~v~~~Pdi~~~~l~~~d~  281 (419)
                      +.+.|+  ++.+++.                 .+|.+          +++||+||+..      ..+|++..+++.++|.
T Consensus       143 ~~~~g~--i~~~~~~-----------------~~~~~----------~~ltralG~~~------~~~p~~~~~~l~~gd~  187 (240)
T 2j82_A          143 AVQLGS--LTIEQAR-----------------QHPWR----------HVLSQCLGRED------LSQIDIQPIDLEPGDR  187 (240)
T ss_dssp             C-----------------------------------C----------CCBSCCBSCTT------CCCCEEEEEECCTTCE
T ss_pred             HHHcCC--CCHHHHh-----------------cCCCc----------CeEeecCCCCC------ceeEEEEEEeeCCCCE
Confidence            334443  2222222                 23333          57999999974      5789999999999998


Q ss_pred             EEEEEcCCCCCCCCHHHHHHHHHccCCHHHHHHHHHHHHHHHHhccCCCCCCeEEEEEEe
Q 014765          282 FFVVASDGVFEFLSSQAVVDMAAKYTDARDACAAIAGESYKLWLENENRTDDITIIIVHI  341 (419)
Q Consensus       282 fLILaSDGlwd~ls~~ei~~iv~~~~~~~~aa~~L~~~A~~~~~~~~g~~DNiTvIvV~l  341 (419)
                       ||||||||||+++++++.+++. ..+++++++.|++.|+.     .++.||+|+|||++
T Consensus       188 -lll~SDGl~d~l~~~~i~~~l~-~~~~~~~a~~l~~~a~~-----~g~~DniTvivv~~  240 (240)
T 2j82_A          188 -LLLCSDGLTEELTDDVISIYLS-EPNVQKAAAALVDAAKT-----HGGRDNVTVVVISV  240 (240)
T ss_dssp             -EEEECHHHHTTSCHHHHHHHHT-CSSHHHHHHHHHHHHHH-----TTCCSCEEEEEEEC
T ss_pred             -EEEECCCCCCCCCHHHHHHHHc-cCCHHHHHHHHHHHHHH-----cCCCCCeEEEEEeC
Confidence             7899999999999999999998 67999999999999998     78999999999975


No 17 
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=100.00  E-value=4.4e-39  Score=302.65  Aligned_cols=226  Identities=24%  Similarity=0.327  Sum_probs=187.9

Q ss_pred             ceeEEEEEecccCCCCCCCCCCcchhhhhccccCCCCeEEEEEEeCCCcchHHHHHHHHHHHHHHHhcCCCCCCcHHHHH
Q 014765           48 FNLEYSVLTQRGYYPDSPDKENQDSYCIKTHVQGSPNVHFFGVFDGHGQFGTQCSNFVQQRLVEELANNPMLLDDPVKAY  127 (419)
Q Consensus        48 ~~~~~~~~s~~G~~~~~~R~~NED~~~v~~~~~~~~~~~l~~V~DGhGg~G~~aS~~a~~~l~~~l~~~~~~~~~~~~~l  127 (419)
                      +.++++..|++|.    .|+.|||++++        +..+|+|||||||+|..||+++++.|.+.+...+    + .+.|
T Consensus         4 ~~~~~~~~s~~G~----~r~~neD~~~~--------~~~~~~V~DG~Gg~G~~as~~~~~~l~~~~~~~~----~-~~~l   66 (234)
T 2jfr_A            4 SVLSAATATDQGP----VRENNQDACLA--------DGILYAVADGFGARGHHASATALKTLSAGFAAAP----D-RDGL   66 (234)
T ss_dssp             SEEEEEEEEECCS----SCSSCCEEEEE--------ETTEEEEEEEESTTHHHHHHHHHHHHHHHHHHSC----S-HHHH
T ss_pred             eeEEEEEecCCCC----CCCcCCCccee--------CCcEEEEEeCCCccHHHHHHHHHHHHHHHHhcCC----c-HHHH
Confidence            4688999999998    59999999965        3459999999998888999999999999887652    2 6889


Q ss_pred             HHHHHHHHHhhhccC-CCCCCCCceEEEEEEECCE---EEEEEcCCCcEEEEEecCCeEEEEccCCCCCCCChhHHHHHH
Q 014765          128 DSAFLTVNAELHSSE-IDDTMSGTTAITVLVVGDK---IYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVK  203 (419)
Q Consensus       128 ~~af~~~~~~l~~~~-~~~~~~GtT~~~v~i~~~~---l~vanvGDSRa~l~~~~g~~~~~~~LS~dH~~~~~~E~~RI~  203 (419)
                      .++|..+|+.+.... .....+|||++++++.+++   ++++|+||||+|+++ ++.   ..+||.||++..     ++.
T Consensus        67 ~~~~~~~~~~l~~~~~~~~~~~gtT~~~~~i~~~~~~~l~~anvGDsr~~l~r-~g~---~~~lt~dh~~~~-----~~~  137 (234)
T 2jfr_A           67 LEAVQQANLRVFELLGDEPTVSGTTLTAVAVFEPGQGGPLVVNIGDSPLYRIR-DGH---MEQLTDDHSVAG-----ELV  137 (234)
T ss_dssp             HHHHHHHHHHHHHHHTTSSSCCEECEEEEECCCGGGTSCEEEEESSCCEEEEE-TTE---EEECSCCCBHHH-----HHH
T ss_pred             HHHHHHHHHHHHHhhccCCCCCCccEEEEEEECCCccEEEEEEEccCceEEEE-CCE---EEEeCCCCCHHH-----HHH
Confidence            999999999998622 1212289999999999988   999999999999995 554   589999999853     344


Q ss_pred             HcCCeEeecccccCCCCCCCCCCCCCccCCCCCCeeeeecCccCcceeeccCCCCccccceeEecccEEEEEcCCCCeEE
Q 014765          204 VCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQLTPNHLFF  283 (419)
Q Consensus       204 ~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~g~~~GlaltRalGd~~~k~~~v~~~Pdi~~~~l~~~d~fL  283 (419)
                      +.|.  ++.+++..                 +|.+          +.+||+||+..      ..+|++..+++.++|. |
T Consensus       138 ~~g~--i~~~~~~~-----------------~~~~----------~~~tralG~~~------~~~~~~~~~~l~~gd~-l  181 (234)
T 2jfr_A          138 RMGE--ITRHEARW-----------------HPQR----------HLLTRALGIGP------HIGPDVFGIDCGPGDR-L  181 (234)
T ss_dssp             HTTS--SCHHHHTT-----------------CTTT----------TCBSCCBSSSS------CCCCEEEECCCCTTCE-E
T ss_pred             HcCC--CCHHHHhc-----------------Cccc----------ceeeecCcCCC------CceeEEEEEecCCCCE-E
Confidence            5553  33333332                 3333          67999999974      5789999999999988 6


Q ss_pred             EEEcCCCCCCCCHHHHHHHHHccCCHHHHHHHHHHHHHHHHhccCCCCCCeEEEEEEe
Q 014765          284 VVASDGVFEFLSSQAVVDMAAKYTDARDACAAIAGESYKLWLENENRTDDITIIIVHI  341 (419)
Q Consensus       284 ILaSDGlwd~ls~~ei~~iv~~~~~~~~aa~~L~~~A~~~~~~~~g~~DNiTvIvV~l  341 (419)
                      |||||||||+++++++.+++ ...+++++|+.|++.|+.     .++.||+|+|||++
T Consensus       182 ll~SDGl~d~~~~~~i~~~~-~~~~~~~~a~~l~~~a~~-----~g~~DniTvivv~~  233 (234)
T 2jfr_A          182 LISSDGLFAAADEALIVDAA-TSPDPQVAVRRLVEVAND-----AGGSDNTTVVVIDL  233 (234)
T ss_dssp             EEECGGGGTTSCHHHHHHHH-TCSSHHHHHHHHHHHHHH-----TTCCSCEEEEEEEE
T ss_pred             EEECCCCccccCHHHHHHHH-ccCCHHHHHHHHHHHHHH-----cCCCCCeEEEEEEe
Confidence            89999999999999999999 777999999999999998     78999999999987


No 18 
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=100.00  E-value=1.3e-34  Score=268.86  Aligned_cols=194  Identities=21%  Similarity=0.221  Sum_probs=152.1

Q ss_pred             CCCeEEEEEEeCCCcc--hHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHhhhc---cCCCCCCCCceEEEEE
Q 014765           82 SPNVHFFGVFDGHGQF--GTQCSNFVQQRLVEELANNPMLLDDPVKAYDSAFLTVNAELHS---SEIDDTMSGTTAITVL  156 (419)
Q Consensus        82 ~~~~~l~~V~DGhGg~--G~~aS~~a~~~l~~~l~~~~~~~~~~~~~l~~af~~~~~~l~~---~~~~~~~~GtT~~~v~  156 (419)
                      +++..+|+|||||||+  |+.||+++++.|.+.+.....        +.++|..+|+.|..   .......+|||+++++
T Consensus         7 ~~~~~l~~VaDG~GG~~~g~~AS~~~~~~l~~~~~~~~~--------~~~~~~~an~~l~~~~~~~~~~~~~GtT~~~~~   78 (211)
T 3rnr_A            7 GGDKAYCVVVDGMGGMIRGDEAAQRALSASVGVLDAGGS--------PLDAVLAAQAAVHRWASQGGILGRTGATMAVAA   78 (211)
T ss_dssp             ETTEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHTTCC--------HHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEE
T ss_pred             CCCccEEEEEeCCcCcHHHHHHHHHHHHHHHHHHhccCC--------HHHHHHHHHHHHHHHHhhccCCCCcchhheeee
Confidence            3678899999999998  999999999999998876432        25777788888775   2334456999999999


Q ss_pred             EE--CCEEEEEEcCCCcEEEEEecCCeEEEEccCCCCCCCChhHHHHHHHcCCeEeecccccCCCCCCCCCCCCCccCCC
Q 014765          157 VV--GDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGG  234 (419)
Q Consensus       157 i~--~~~l~vanvGDSRa~l~~~~g~~~~~~~LS~dH~~~~~~E~~RI~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~  234 (419)
                      +.  ++++|++|+||||+|+++ ++.   .++||.||++..+     +.+.|.   ++                    ..
T Consensus        79 i~~~~~~~~~anvGDSr~yl~r-~g~---~~~lt~dh~~~~~-----~~~~g~---~~--------------------~~  126 (211)
T 3rnr_A           79 VNLRDGTLEWASVGDCRVYLFK-GGR---LSRLSLDHNVSSE-----MVLLGR---GP--------------------VP  126 (211)
T ss_dssp             EETTTTEEEEEEESSCEEEEEE-TTE---EEECCCCCBHHHH-----HHHTTS---CC--------------------CC
T ss_pred             eeeCCCEEEEEEEccCeEEEEe-CCE---EEEECCCcHHHHH-----HHHcCC---Ch--------------------hh
Confidence            99  999999999999999996 454   5899999998533     334442   11                    22


Q ss_pred             CCCeeeeecCccCcceeeccCCCCccccceeEecccE--EEEEcCCCCeEEEEEcCCCCCCCCHHHHHHHHHccCCHHHH
Q 014765          235 DPPRLWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEV--SVVQLTPNHLFFVVASDGVFEFLSSQAVVDMAAKYTDARDA  312 (419)
Q Consensus       235 ~p~r~~~~~g~~~GlaltRalGd~~~k~~~v~~~Pdi--~~~~l~~~d~fLILaSDGlwd~ls~~ei~~iv~~~~~~~~a  312 (419)
                      +|.|          +.+||+||...      ..+|++  ..+++.++|.| |||||||||+++++++.+++....+    
T Consensus       127 ~~~~----------~~ltralG~~~------~~~~~~~~~~~~l~~gd~l-lL~SDGl~d~~~~~~i~~~l~~~~~----  185 (211)
T 3rnr_A          127 GPAG----------EMITSFIGIEN------LTEISTSEAPLPLEAGEGV-LVVSDGVYRSLHEDRIAMALSRGSD----  185 (211)
T ss_dssp             SHHH----------HCBSCCBTCSS------CCCCEECSSCEECCTTCEE-EEEEC-----CCTTEEEEEECTTSC----
T ss_pred             CCCc----------cEEecccCCCC------CcceeEecceecCCCCCEE-EEEcCCCCCCcCHHHHHHHHhcCCh----
Confidence            3333          57999999975      467888  78999999985 7999999999999999999876544    


Q ss_pred             HHHHHHHHHHHHhccCC--CCCCeEEEEEEe
Q 014765          313 CAAIAGESYKLWLENEN--RTDDITIIIVHI  341 (419)
Q Consensus       313 a~~L~~~A~~~~~~~~g--~~DNiTvIvV~l  341 (419)
                      |+.|++.|++     +|  +.||+|+|||++
T Consensus       186 a~~L~~~a~~-----~g~~~~DNiTvivv~L  211 (211)
T 3rnr_A          186 ARGILQEVEA-----QGRPYQDNATLALVIL  211 (211)
T ss_dssp             HHHHHHHHHH-----SCTTSCSSCEEEEEEC
T ss_pred             HHHHHHHHHH-----cCCCCCCceEEEEEeC
Confidence            8899999998     77  899999999985


No 19 
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=99.85  E-value=3.4e-20  Score=174.79  Aligned_cols=209  Identities=18%  Similarity=0.158  Sum_probs=147.0

Q ss_pred             CCceeEEEEEecccCCCCCCCCCCcchhhhhccccCCCCeEEEEEEeCCCcc--hHHHHHHHHHHHHHHHhcCCCCCCcH
Q 014765           46 YNFNLEYSVLTQRGYYPDSPDKENQDSYCIKTHVQGSPNVHFFGVFDGHGQF--GTQCSNFVQQRLVEELANNPMLLDDP  123 (419)
Q Consensus        46 ~~~~~~~~~~s~~G~~~~~~R~~NED~~~v~~~~~~~~~~~l~~V~DGhGg~--G~~aS~~a~~~l~~~l~~~~~~~~~~  123 (419)
                      .++.+.+++++..-.    .+..+.|.+.+...   .++..+|+|+||+|+.  |..+|..++..|...+....    + 
T Consensus         4 ~~~~i~~~~~~~~~p----~~~v~GD~y~~~~~---~~~~~~~~vaDg~G~G~~aa~~s~~~~~~l~~~~~~~~----~-   71 (242)
T 3t91_A            4 MSYRVSTGAAHAAKG----GGLVSGDSYSMMEL---GARKYAAAISDGMGNGARAHFESNETIKLLEKILESGI----D-   71 (242)
T ss_dssp             CCCEEEEEEEEECTT----SCSCCSCEEEEEEE---TTTEEEEEEECC-----CCSEEECHHHHHHHHHHHHTC----C-
T ss_pred             ceEEEEEEeehhcCC----ccccCCcEEEEEEe---CCCeEEEEEEeeCCCCHHHHHHHHHHHHHHHHHHHhCC----C-
Confidence            467788888777554    38899999987543   2566789999999965  77777777777776665432    2 


Q ss_pred             HHHHHHHHHHHHHhhhccCCCCCCCCceEEEEEEE--CCEEEEEEcCCCcEEEEEecCCeEEEEccCCCCCCCChhHHHH
Q 014765          124 VKAYDSAFLTVNAELHSSEIDDTMSGTTAITVLVV--GDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYER  201 (419)
Q Consensus       124 ~~~l~~af~~~~~~l~~~~~~~~~~GtT~~~v~i~--~~~l~vanvGDSRa~l~~~~g~~~~~~~LS~dH~~~~~~E~~R  201 (419)
                         +.+++..+|+.+.....  ..+++|+++++++  .++++++|+||+|+|+++ ++.   ..+++.++.+        
T Consensus        72 ---~~~~l~~~n~~l~~~~~--~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r-~g~---~~~l~~~~~~--------  134 (242)
T 3t91_A           72 ---EKIAIKTINSILSLRTT--DEIYSTLDLSIIDLQDASCKFLKVGSTPSFIKR-GDQ---VMKVQASNLP--------  134 (242)
T ss_dssp             ---HHHHHHHHHHHHTTC------CCCCEEEEEEETTTCEEEEEEESCCCEEEEE-TTE---EEECCCC-----------
T ss_pred             ---HHHHHHHHHHHHHhcCC--CCeEeEEEEEEEECCCCEEEEEcCCCCceEEEE-CCE---EEEecCCCce--------
Confidence               45566677887765322  2478999999997  689999999999999995 453   3555433222        


Q ss_pred             HHHcCCeEeecccccCCCCCCCCCCCCCccCCCCCCeeeeecCccCcceeeccCCCCccccceeEecccEEEEEcCCCCe
Q 014765          202 VKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQLTPNHL  281 (419)
Q Consensus       202 I~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~g~~~GlaltRalGd~~~k~~~v~~~Pdi~~~~l~~~d~  281 (419)
                                                                           ||...      ...++...++|.++|.
T Consensus       135 -----------------------------------------------------lG~~~------~~~~~~~~~~l~~GD~  155 (242)
T 3t91_A          135 -----------------------------------------------------IGIIN------EFDVEVVSEQLKAGDL  155 (242)
T ss_dssp             -------------------------------------------------------CCC------TTCEEEEEEECCTTCE
T ss_pred             -----------------------------------------------------eEecC------CCcceEEEEEeCCCCE
Confidence                                                                 23221      1345677889999999


Q ss_pred             EEEEEcCCCCCCCC-----HHHHHHHHHc--cCCHHHHHHHHHHHHHHHHhccCCC--CCCeEEEEEEeCCCCCC
Q 014765          282 FFVVASDGVFEFLS-----SQAVVDMAAK--YTDARDACAAIAGESYKLWLENENR--TDDITIIIVHIKDFSNL  347 (419)
Q Consensus       282 fLILaSDGlwd~ls-----~~ei~~iv~~--~~~~~~aa~~L~~~A~~~~~~~~g~--~DNiTvIvV~l~~~~~~  347 (419)
                       ||||||||||.++     ...+..++..  ..++++.++.|++.+...    .+.  .||+|++++++.+..+.
T Consensus       156 -lll~SDGl~e~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~l~~~~~~~----~~~~~~DDiTvv~i~~~~~~~~  225 (242)
T 3t91_A          156 -LIMMSDGIFEGPKHVENHDLWMKRKMKGLKTNDPQEIADLLMEEVIRT----RSGQIEDDMTVVVVRIDHNTPK  225 (242)
T ss_dssp             -EEEECHHHHTCSTTCSCHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHH----TTSCCCSCEEEEEEEEEECCCC
T ss_pred             -EEEECCCcccCCCcccchHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH----cCCCCCCceEEEEEEEecCCCc
Confidence             6899999999998     6677777764  368999999999999873    223  69999999999865433


No 20 
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=99.81  E-value=1.8e-18  Score=163.45  Aligned_cols=208  Identities=15%  Similarity=0.140  Sum_probs=146.8

Q ss_pred             CceeEEEEEecccCCCCCCCCCCcchhhhhccccCCCCeEEEEEEeCCCcc--hHHHHHHHHHHHHHHHhcCCCCCCcHH
Q 014765           47 NFNLEYSVLTQRGYYPDSPDKENQDSYCIKTHVQGSPNVHFFGVFDGHGQF--GTQCSNFVQQRLVEELANNPMLLDDPV  124 (419)
Q Consensus        47 ~~~~~~~~~s~~G~~~~~~R~~NED~~~v~~~~~~~~~~~l~~V~DGhGg~--G~~aS~~a~~~l~~~l~~~~~~~~~~~  124 (419)
                      ++.+++++.+....    .+..+.|.|.+...   .++..+|+|+||+|+.  |..++..++..+...+....    +  
T Consensus         8 ~~~~~~~~~~~~~~----~~~vgGD~y~~~~~---~~~~~~~~vaD~~G~G~~aa~~s~~~~~~l~~~~~~~~----~--   74 (242)
T 3pu9_A            8 PVTIELAVAKTHKF----GTRESGDTVELVER---PGGGFSAVLVDGQGSGAGAKRLSLLVAGAAVRLLNEGV----R--   74 (242)
T ss_dssp             CEEEEEEEEEECCT----TCSSCSEEEEEEEC---TTSEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTC----C--
T ss_pred             CcEEEEEEEecccC----ccccCCceEEEEEe---CCCEEEEEEEecCCCCHHHHHHHHHHHHHHHHHHHcCC----C--
Confidence            45566666665544    37889999877543   2456779999999965  66666666666666554322    2  


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCCCceEEEEEEE--CCEEEEEEcCCCcEEEEEecCCeEEEEccCCCCCCCChhHHHHH
Q 014765          125 KAYDSAFLTVNAELHSSEIDDTMSGTTAITVLVV--GDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERV  202 (419)
Q Consensus       125 ~~l~~af~~~~~~l~~~~~~~~~~GtT~~~v~i~--~~~l~vanvGDSRa~l~~~~g~~~~~~~LS~dH~~~~~~E~~RI  202 (419)
                        ..+++..+|+.|.....  ..+.+|+++++++  .++++++|+||+++|+++ ++.   .++|+.++.+         
T Consensus        75 --~~~~l~~~n~~l~~~~~--~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r-~g~---~~~l~~~~~~---------  137 (242)
T 3pu9_A           75 --DGAAARAAHDFLYAMRD--GKVSAALDILSVDLASRSVLVTRNSEVPMLLGR-NGE---FEQISESGGR---------  137 (242)
T ss_dssp             --HHHHHHHHHHHHHHHTT--TCCCEEEEEEEEETTTTEEEEEEESCCCEEEEE-TTE---EEEECCCCCC---------
T ss_pred             --HHHHHHHHHHHHHhccC--CCcEEEEEEEEEECCCCEEEEEeCCCCcEEEEE-CCE---EEEeCCCCcc---------
Confidence              34566677777765321  2378999999996  579999999999999995 454   4667766543         


Q ss_pred             HHcCCeEeecccccCCCCCCCCCCCCCccCCCCCCeeeeecCccCcceeeccCCCCccccceeEecccEEEEEcCCCCeE
Q 014765          203 KVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQLTPNHLF  282 (419)
Q Consensus       203 ~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~g~~~GlaltRalGd~~~k~~~v~~~Pdi~~~~l~~~d~f  282 (419)
                                                                          ||...      ...++...++|.++|. 
T Consensus       138 ----------------------------------------------------lG~~~------~~~~~~~~~~l~~Gd~-  158 (242)
T 3pu9_A          138 ----------------------------------------------------IGIYR------HTRPRVLEFPAEPGLT-  158 (242)
T ss_dssp             ----------------------------------------------------BSSCT------TCCCEEEEEECCTTCE-
T ss_pred             ----------------------------------------------------ccccC------CCCceEEEEEeCCCCE-
Confidence                                                                23221      1345677899999999 


Q ss_pred             EEEEcCCCCCCCC-------HHHHHHHHH-ccCCHHHHHHHHHHHHHHHHhccCCCCCCeEEEEEEeCCCC
Q 014765          283 FVVASDGVFEFLS-------SQAVVDMAA-KYTDARDACAAIAGESYKLWLENENRTDDITIIIVHIKDFS  345 (419)
Q Consensus       283 LILaSDGlwd~ls-------~~ei~~iv~-~~~~~~~aa~~L~~~A~~~~~~~~g~~DNiTvIvV~l~~~~  345 (419)
                      |+||||||+|..+       .+++..++. ...++++.++.|++.+....-  ....||+|++++++.+..
T Consensus       159 lll~TDGl~e~~~~~~~~~g~~~l~~l~~~~~~~~~~~~~~l~~~~~~~~~--~~~~DDiTvlvv~~~~~~  227 (242)
T 3pu9_A          159 VILVSDGIIGAGGRRGQPLEFLATGGRVAGPETPAQAIADELLEAALVADD--GRAGDDMTVVVLRLRNVE  227 (242)
T ss_dssp             EEEECHHHHTTTTTTTCCCCHHHHHHHHCCTTCCHHHHHHHHHHHHHHHTT--TSCSSCEEEEEEEEEECC
T ss_pred             EEEECcCcccCCCCccccccHHHHHHHHhccCCCHHHHHHHHHHHHHHhcC--CCCCCCeEEEEEEEecCC
Confidence            6899999998764       477765554 236899999999999987421  125799999999997543


No 21 
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=99.69  E-value=5.3e-16  Score=147.18  Aligned_cols=193  Identities=16%  Similarity=0.095  Sum_probs=119.6

Q ss_pred             CCCCcchhhhhccccCCCCeEEEEEEeCCCcc--hHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHhhhccCC
Q 014765           66 DKENQDSYCIKTHVQGSPNVHFFGVFDGHGQF--GTQCSNFVQQRLVEELANNPMLLDDPVKAYDSAFLTVNAELHSSEI  143 (419)
Q Consensus        66 R~~NED~~~v~~~~~~~~~~~l~~V~DGhGg~--G~~aS~~a~~~l~~~l~~~~~~~~~~~~~l~~af~~~~~~l~~~~~  143 (419)
                      +...-|.|-+...   .++..+++|+||+|+.  +..++..+...+...+................++..+|+.|...  
T Consensus        48 ~~vgGD~yd~~~~---~~~~~~~~vaD~~GhG~~aa~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~l~~ln~~l~~~--  122 (255)
T 3f79_A           48 LYLSGDFVDYFRV---DERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFKPSEVLAHINRGLINT--  122 (255)
T ss_dssp             SSSCSEEEEEEEE---TTTEEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHHTTCCC----CHHHHHHHHHHHHBTT--
T ss_pred             hhcCceEEeEEEe---CCCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHHHhc--
Confidence            5667898855432   2567899999999954  55555555555544433211101111223567777889888753  


Q ss_pred             CCCCCCceEEEEEEE--CCEEEEEEcCCC-cEEEEEecCCeEEEEccCCCCCCCChhHHHHHHHcCCeEeecccccCCCC
Q 014765          144 DDTMSGTTAITVLVV--GDKIYVANVGDS-RAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVEGLKD  220 (419)
Q Consensus       144 ~~~~~GtT~~~v~i~--~~~l~vanvGDS-Ra~l~~~~g~~~~~~~LS~dH~~~~~~E~~RI~~~Gg~v~~~~~~~~~~~  220 (419)
                       ...+++|+++++++  .++++++|+|++ +.|+++ +|.   ...++.++.|                           
T Consensus       123 -~~~~~~T~~~~~id~~~~~l~~~~aGh~p~~~l~~-~g~---~~~l~~~~~~---------------------------  170 (255)
T 3f79_A          123 -KLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFV-EGQ---AGYLEGRGLP---------------------------  170 (255)
T ss_dssp             -BSSCCEEEEEEEEETTTTEEEEEECSCSCCCEEEC---C---EEECCC-------------------------------
T ss_pred             -CCCCEEEEEEEEEECCCCEEEEEeCCCCCceEEEe-CCe---EEEeCCCCce---------------------------
Confidence             23489999999995  579999999995 588874 554   3556655433                           


Q ss_pred             CCCCCCCCCccCCCCCCeeeeecCccCcceeeccCCCCccccceeEecccEEEEEcCCCCeEEEEEcCCCCCCCCHHH--
Q 014765          221 PNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQLTPNHLFFVVASDGVFEFLSSQA--  298 (419)
Q Consensus       221 ~~~~~~~~~~~~~~~p~r~~~~~g~~~GlaltRalGd~~~k~~~v~~~Pdi~~~~l~~~d~fLILaSDGlwd~ls~~e--  298 (419)
                                                        ||...      ...++...+++.++|. |+||||||++.++.++  
T Consensus       171 ----------------------------------lG~~~------~~~~~~~~~~l~~gd~-lll~TDGl~e~~~~~~~~  209 (255)
T 3f79_A          171 ----------------------------------VGLFD------DATYDDRVMELPPSFS-LSLFSDGILDVLPGATLK  209 (255)
T ss_dssp             -----------------------------------CCSS------CCCCCC---BCCSSEE-EEEECSCCCCCSCC---C
T ss_pred             ----------------------------------EEEcC------CCceEEEEEEECCCCE-EEEECCCcCcccCCCcch
Confidence                                              23221      1334566788999999 6899999999998887  


Q ss_pred             -----HHHHHHcc-CCHHHHHHHHHHHHHHHHhccCCCCCCeEEEEEEeC
Q 014765          299 -----VVDMAAKY-TDARDACAAIAGESYKLWLENENRTDDITIIIVHIK  342 (419)
Q Consensus       299 -----i~~iv~~~-~~~~~aa~~L~~~A~~~~~~~~g~~DNiTvIvV~l~  342 (419)
                           +.+++... .++++.++.|. .+..     .+..||+|+++|+..
T Consensus       210 ~g~~~l~~~l~~~~~~~~~~~~~l~-~~~~-----~~~~DDiTvl~v~~~  253 (255)
T 3f79_A          210 EKEASLPEQVAAAGGTLDGLRQVFG-LANL-----AEMPDDIALLVLSRN  253 (255)
T ss_dssp             CTTTSSHHHHHHHSCSSHHHHHHC-----------CCSSSCEEEEEEEEC
T ss_pred             hhHHHHHHHHHhcCCCHHHHHHHHH-hccC-----CCCCCCEEEEEEEec
Confidence                 88888653 35666666665 3333     678999999999874


No 22 
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=99.67  E-value=2.3e-15  Score=137.22  Aligned_cols=188  Identities=19%  Similarity=0.175  Sum_probs=126.8

Q ss_pred             eEEEEEecccCCCCCCCCCCcchhhhhccccCCCCeEEEEEEeCCCcchHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHH
Q 014765           50 LEYSVLTQRGYYPDSPDKENQDSYCIKTHVQGSPNVHFFGVFDGHGQFGTQCSNFVQQRLVEELANNPMLLDDPVKAYDS  129 (419)
Q Consensus        50 ~~~~~~s~~G~~~~~~R~~NED~~~v~~~~~~~~~~~l~~V~DGhGg~G~~aS~~a~~~l~~~l~~~~~~~~~~~~~l~~  129 (419)
                      +++++.+....    .+..+.|.|.+...    ++..+++|+||.|.  ...|.++...+...+....  ..++.    +
T Consensus         4 ~~~~~~~~p~~----~~~v~GD~y~~~~~----~~~~~~~v~Dv~Gh--G~~Aa~~s~~~~~~l~~~~--~~~p~----~   67 (193)
T 3zt9_A            4 LEVGIYTRARE----GEIACGDACLVKRV----EGVIFLAVGDGIGH--GPEAARAAEIAIASMESSM--NTGLV----N   67 (193)
T ss_dssp             CCEEEEEECCT----TCSSCSEEEEEEEE----TTEEEEEEEEESSS--HHHHHHHHHHHHHHHHHHT--TSCHH----H
T ss_pred             cEEEEEEeccC----CCCCCCCeEEEEEe----CCEEEEEEEeCCCC--CHHHHHHHHHHHHHHHHcc--cCCHH----H
Confidence            44556555543    27889999987643    57889999999994  2333333333334443322  12333    4


Q ss_pred             HHHHHHHhhhccCCCCCCCCceEEEEEEE--CCEEEEEEcCCCcEEEEEecCCeEEEEccCCCCCCCChhHHHHHHHcCC
Q 014765          130 AFLTVNAELHSSEIDDTMSGTTAITVLVV--GDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVKVCGA  207 (419)
Q Consensus       130 af~~~~~~l~~~~~~~~~~GtT~~~v~i~--~~~l~vanvGDSRa~l~~~~g~~~~~~~LS~dH~~~~~~E~~RI~~~Gg  207 (419)
                      .+..+|+.+...      .|+|++++.++  .+++.++|+|+++.|+++. +.   ...+....                
T Consensus        68 il~~ln~~l~~~------~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~-~~---~~~l~~~~----------------  121 (193)
T 3zt9_A           68 IFQLCHRELRGT------RGAVAALCRVDRRQGLWQAAIVGNIHVKILSA-KG---IITPLATP----------------  121 (193)
T ss_dssp             HHHHHHHHHTTS------SCEEEEEEEEETTTTEEEEEEESSCEEEEEET-TE---EECCCCBC----------------
T ss_pred             HHHHHHHHHhcc------CceEEEEEEEECCCCEEEEEecCCceEEEEcC-Cc---EEEecCCC----------------
Confidence            455677777531      46788888887  5699999999999999964 42   23222110                


Q ss_pred             eEeecccccCCCCCCCCCCCCCccCCCCCCeeeeecCccCcceeeccCCCCccccceeEecccEEEEEcCCCCeEEEEEc
Q 014765          208 RVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQLTPNHLFFVVAS  287 (419)
Q Consensus       208 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~g~~~GlaltRalGd~~~k~~~v~~~Pdi~~~~l~~~d~fLILaS  287 (419)
                                                                   ..||...      ...++...+++.++|. |+|+|
T Consensus       122 ---------------------------------------------g~lG~~~------~~~~~~~~~~l~~gd~-l~l~s  149 (193)
T 3zt9_A          122 ---------------------------------------------GILGYNY------PHQLLIAKGSYQEGDL-FLIHS  149 (193)
T ss_dssp             ---------------------------------------------CBBTTBC------CSSCCCEEEECCTTCE-EEEEC
T ss_pred             ---------------------------------------------CceeccC------CccceeEEeccCCCCE-EEEEC
Confidence                                                         0133221      1245667889999999 68999


Q ss_pred             CCCCCCCCHHHHHHHHHccCCHHHHHHHHHHHHHHHHhccCCCCCCeEEEEEE
Q 014765          288 DGVFEFLSSQAVVDMAAKYTDARDACAAIAGESYKLWLENENRTDDITIIIVH  340 (419)
Q Consensus       288 DGlwd~ls~~ei~~iv~~~~~~~~aa~~L~~~A~~~~~~~~g~~DNiTvIvV~  340 (419)
                      |||++.++.+++..++  ..+|++.|+.|++.+       .+..||+|++|++
T Consensus       150 DGl~e~~~~~~~~~~~--~~~~~~~a~~l~~~~-------~~~~Dd~tvlv~r  193 (193)
T 3zt9_A          150 DGIQEGAVPLALLANY--RLTAEELVRLIGEKY-------GRRDDDVAVIVAR  193 (193)
T ss_dssp             TTSCTTCSCGGGGGCT--TSCHHHHHHHHHHHH-------CCTTSCEEEEEEC
T ss_pred             CCCCCccChhhhhchh--cCCHHHHHHHHHHHh-------CcCCCCeEEEEEC
Confidence            9999999998887765  358999999999986       3479999999985


No 23 
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=99.28  E-value=1.4e-09  Score=109.70  Aligned_cols=191  Identities=14%  Similarity=0.130  Sum_probs=122.1

Q ss_pred             CCCcchhhhhccccCCCCeEEEEEEeCCCcc--hHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHhhhccCCC
Q 014765           67 KENQDSYCIKTHVQGSPNVHFFGVFDGHGQF--GTQCSNFVQQRLVEELANNPMLLDDPVKAYDSAFLTVNAELHSSEID  144 (419)
Q Consensus        67 ~~NED~~~v~~~~~~~~~~~l~~V~DGhGg~--G~~aS~~a~~~l~~~l~~~~~~~~~~~~~l~~af~~~~~~l~~~~~~  144 (419)
                      ...-|.|.+...    ++..+++|+|++|.-  +...+..+...|...+...    .++.+    .+..+|..+...   
T Consensus        50 ~vgGD~y~~~~~----~~~~~~~v~Dv~GhGv~AA~~~~~~~~~l~~~~~~~----~~p~~----il~~ln~~~~~~---  114 (399)
T 3ke6_A           50 AAGGDWFDALAL----GDRLVLVVGDVVGHGVEAAAVMSQLRTALRMQISAG----YTVVE----ALEAVDRFHKQV---  114 (399)
T ss_dssp             SCCSEEEEEEEC----SSEEEEEEEECSSCSHHHHHHHHHHHHHHHHHHHTT----CCHHH----HHHHHHHHGGGS---
T ss_pred             CCCCceEEEEEE----CCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhcC----CCHHH----HHHHHHHHHHhc---
Confidence            455688876543    348899999988842  3333444444444444322    13333    344455533221   


Q ss_pred             CCCCCceEEEEEEE--CCEEEEEEcCCCcEEEEEecCCeEEEEccCCCCCCCChhHHHHHHHcCCeEeecccccCCCCCC
Q 014765          145 DTMSGTTAITVLVV--GDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPN  222 (419)
Q Consensus       145 ~~~~GtT~~~v~i~--~~~l~vanvGDSRa~l~~~~g~~~~~~~LS~dH~~~~~~E~~RI~~~Gg~v~~~~~~~~~~~~~  222 (419)
                      ...+++|+++++++  .+++.++|+|..+.|+++.+|.   ...+..++.+                             
T Consensus       115 ~~~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~g~---~~~l~~~~~~-----------------------------  162 (399)
T 3ke6_A          115 PGSKSATMCVGSLDFTSGEFQYCTAGHPPPLLVTADAS---ARYVEPTGAG-----------------------------  162 (399)
T ss_dssp             TTCTTCEEEEEEEETTTCEEEEEEESSCCCEEECTTSC---EEECCCCSCC-----------------------------
T ss_pred             CCCcEEEEEEEEEECCCCEEEEECCCCChhEEEeCCCC---EEEeecCCCc-----------------------------
Confidence            13378899988886  5789999999999999965664   2334332211                             


Q ss_pred             CCCCCCCccCCCCCCeeeeecCccCcceeeccCCCCccccceeEecccEEEEEcCCCCeEEEEEcCCCCCCCCH------
Q 014765          223 IQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQLTPNHLFFVVASDGVFEFLSS------  296 (419)
Q Consensus       223 ~~~~~~~~~~~~~p~r~~~~~g~~~GlaltRalGd~~~k~~~v~~~Pdi~~~~l~~~d~fLILaSDGlwd~ls~------  296 (419)
                                                     .||..        ...+...++|.++|. |+|+||||.|..+.      
T Consensus       163 -------------------------------plG~~--------~~~~~~~~~l~~Gd~-l~l~TDGl~e~~~~~~~~g~  202 (399)
T 3ke6_A          163 -------------------------------PLGSG--------TGFPVRSEVLNIGDA-ILFYTDGLIERPGRPLEAST  202 (399)
T ss_dssp             -------------------------------CTTSS--------CCCCCEEEECCTTCE-EEEECTTTTSCTTCCHHHHH
T ss_pred             -------------------------------ceECC--------CCceeEEEEECCCCE-EEEECCCcccCCCCCcchhH
Confidence                                           12321        123455688999999 68999999999765      


Q ss_pred             HHHHHHHHccC---------CHHHHHHHHHHHHHHHHhccCCCCCCeEEEEEEeCCC
Q 014765          297 QAVVDMAAKYT---------DARDACAAIAGESYKLWLENENRTDDITIIIVHIKDF  344 (419)
Q Consensus       297 ~ei~~iv~~~~---------~~~~aa~~L~~~A~~~~~~~~g~~DNiTvIvV~l~~~  344 (419)
                      +.+.+++....         ++...++.|++.+++.+....+..||+|++++++...
T Consensus       203 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~DDitvl~vr~~~~  259 (399)
T 3ke6_A          203 AEFADLAASIASGSGGFVLDAPARPIDRLCSDTLELLLRSTGYNDDVTLLAMQRRAP  259 (399)
T ss_dssp             HHHHHHHHHHTC----------CCHHHHHHHHHHHHHHHTTCCSSCEEEEEEEECCC
T ss_pred             HHHHHHHHHhhcccccccccChhhHHHHHHHHHHHHhccCCCCCCceEEEEEEeeCC
Confidence            55666665421         3455677788887776655456789999999999863


No 24 
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=98.49  E-value=8.3e-07  Score=88.71  Aligned_cols=191  Identities=14%  Similarity=0.078  Sum_probs=101.7

Q ss_pred             CCCCcchhhhhccccCCCCeEEEEEEeCCCcc--hHHHHHHHHHHHHHHHhcCCC----CCCcHHHHHHHHHHHHHHhhh
Q 014765           66 DKENQDSYCIKTHVQGSPNVHFFGVFDGHGQF--GTQCSNFVQQRLVEELANNPM----LLDDPVKAYDSAFLTVNAELH  139 (419)
Q Consensus        66 R~~NED~~~v~~~~~~~~~~~l~~V~DGhGg~--G~~aS~~a~~~l~~~l~~~~~----~~~~~~~~l~~af~~~~~~l~  139 (419)
                      ....-|.|-+...   .++..+++|+|+.|.-  +...+-.+...+...+.....    ...++.    ..+..+|+.+.
T Consensus       187 ~~vgGD~yd~~~~---~~~~~~~~i~Dv~GhGv~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~p~----~~l~~ln~~l~  259 (394)
T 3eq2_A          187 LYLSGDFVDYFRV---DERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFKPS----EVLAHINRGLI  259 (394)
T ss_dssp             ---CCCEEECCEE---TTTEEEEEEEEESSCSTTTHHHHHHHHHHHHHHHHHSCSSCSSSSCCHH----HHHHHHHHHHH
T ss_pred             hhcCccEEeEEEe---CCCcEEEEEEECCCCChHHHHHHHHHHHHHHHHHHhhhccCCcccCCHH----HHHHHHHHHHh
Confidence            3445687755432   2567889999987742  444444555555555443221    112333    34445666665


Q ss_pred             ccCCCCCCCCceEEEEEEE--CCEEEEEEcCCCcEEEEEecCCeEEEEccCCCCCCCChhHHHHHHHcCCeEeecccccC
Q 014765          140 SSEIDDTMSGTTAITVLVV--GDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVEG  217 (419)
Q Consensus       140 ~~~~~~~~~GtT~~~v~i~--~~~l~vanvGDSRa~l~~~~g~~~~~~~LS~dH~~~~~~E~~RI~~~Gg~v~~~~~~~~  217 (419)
                      ...   ..+..|+++++++  .+++.++|.|-...+++.++|.   +..+.....                         
T Consensus       260 ~~~---~~~~~t~~~~~~d~~~~~l~~~~aGh~p~~~~~~~g~---~~~l~~~~~-------------------------  308 (394)
T 3eq2_A          260 NTK---LGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQ---AGYLEGRGL-------------------------  308 (394)
T ss_dssp             HTT---CCCCEEEEEEEEETTTTEEEEEECSSSCCCEEEETTE---EEECCCC---------------------------
T ss_pred             ccC---cCcEEEEEEEEEECCCCEEEEEcCCCCCCcEEecCCc---eEecCCCCc-------------------------
Confidence            322   2357888888886  4789999999865444435654   233332111                         


Q ss_pred             CCCCCCCCCCCCccCCCCCCeeeeecCccCcceeeccCCCCccccceeEecccEEEEEcCCCCeEEEEEcCCCCCCCCH-
Q 014765          218 LKDPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQLTPNHLFFVVASDGVFEFLSS-  296 (419)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~p~r~~~~~g~~~GlaltRalGd~~~k~~~v~~~Pdi~~~~l~~~d~fLILaSDGlwd~ls~-  296 (419)
                                                          .||...      ........+++.++|. |+|.||||.|.... 
T Consensus       309 ------------------------------------plG~~~------~~~~~~~~~~l~~gd~-l~l~TDG~~e~~~~~  345 (394)
T 3eq2_A          309 ------------------------------------PVGLFD------DATYDDRVMELPPSFS-LSLFSDGILDVLPGA  345 (394)
T ss_dssp             ------------------------------------CCSCCC------CC--CCEEEECCSSCE-EEECSSCCCC-----
T ss_pred             ------------------------------------eeEecC------CCceEEEEEEeCCCCE-EEEECCCcccccCcc
Confidence                                                123221      1223455689999999 68999999998543 


Q ss_pred             ------HHHHHHHHccCCHHHHHHHHHHHHHHHHhccCCCCCCeEEEEEEeC
Q 014765          297 ------QAVVDMAAKYTDARDACAAIAGESYKLWLENENRTDDITIIIVHIK  342 (419)
Q Consensus       297 ------~ei~~iv~~~~~~~~aa~~L~~~A~~~~~~~~g~~DNiTvIvV~l~  342 (419)
                            +.+.+++.....   ..+.|.+....  .......||+|+++|+..
T Consensus       346 ~~~~~~~~l~~~l~~~~~---~~~~l~~~~~~--~~~~~~~DDit~l~i~~~  392 (394)
T 3eq2_A          346 TLKEKEASLPEQVAAAGG---TLDGLRQVFGL--ANLAEMPDDIALLVLSRN  392 (394)
T ss_dssp             CCSTTTTTSHHHHHTTC-----CHHHHHHHSC--CCSCC--CCCEEEEEC--
T ss_pred             cchhhHHHHHHHHHhcch---hHHHHHHHhcc--cCCCCCCCceEEEEEecc
Confidence                  445666655322   13334433221  112345799999999865


No 25 
>3s3x_D Psalmotoxin-1; acid-sensing, ION channel, membrane protein, sodium channel, membrane, glycoprotein, ION transport, membrane; HET: NAG; 2.99A {Psalmopoeus cambridgei} PDB: 2kni_A 1lmm_A 4fz0_M* 4fz1_D*
Probab=46.81  E-value=6.8  Score=23.93  Aligned_cols=9  Identities=78%  Similarity=2.136  Sum_probs=6.7

Q ss_pred             CCC--CCCCCC
Q 014765            2 GCV--HGKCCS   10 (419)
Q Consensus         2 ~~~--~~~~~~   10 (419)
                      ||+  ||.||.
T Consensus         8 gcvnrhgdcce   18 (37)
T 3s3x_D            8 GCVNRHGDCCE   18 (37)
T ss_dssp             BCTTCTTCBCT
T ss_pred             chhccccchhh
Confidence            675  888884


No 26 
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=40.09  E-value=0.35  Score=50.21  Aligned_cols=77  Identities=5%  Similarity=-0.019  Sum_probs=59.6

Q ss_pred             eeeccCCCCccccceeEecccEEEEEcCC--CC----eEEEEEcCCCCCCCCHHHHHHHHHcc-----CCHHHHHHHHHH
Q 014765          250 AFTRSVGDSTAEKIGVVAVPEVSVVQLTP--NH----LFFVVASDGVFEFLSSQAVVDMAAKY-----TDARDACAAIAG  318 (419)
Q Consensus       250 altRalGd~~~k~~~v~~~Pdi~~~~l~~--~d----~fLILaSDGlwd~ls~~ei~~iv~~~-----~~~~~aa~~L~~  318 (419)
                      -++||+|-..      ..+.|+..+.+..  ||    .| ++++   ||++...++.+++...     .+.+.+++.|++
T Consensus        43 ~l~~~~~l~~------~~~~d~~~~~~~~~ig~~~~~~f-~~t~---~~~~~~~~~~~~i~e~~~~~~~~~~~~~~~l~~  112 (543)
T 3c4z_A           43 PLSKCEALRE------SLDLGFEGMCLEQPIGKRLFQQF-LRTH---EQHGPALQLWKDIEDYDTADDALRPQKAQALRA  112 (543)
T ss_dssp             CGGGGHHHHH------HSCCCHHHHHTSSHHHHHHHHHH-HHHC---GGGHHHHHHHHHHHHHHTSCTTTHHHHHHHHHH
T ss_pred             CchHHHHHHh------ccccCHHHhhccCcccHHHHHHH-HhcC---CchhHHHHHHhhhhhhccCchhhHHHHHHHHHH
Confidence            4789988663      4566777777777  77    75 4666   8999988888877654     377888899999


Q ss_pred             HHHHHHhccCCCCCCeEEE----EEEe
Q 014765          319 ESYKLWLENENRTDDITII----IVHI  341 (419)
Q Consensus       319 ~A~~~~~~~~g~~DNiTvI----vV~l  341 (419)
                      .++.     .++.||++.+    +.++
T Consensus       113 ~~~~-----~~~~d~~~~~~~~~v~~v  134 (543)
T 3c4z_A          113 AYLE-----PQAQLFCSFLDAETVARA  134 (543)
T ss_dssp             HHTS-----TTCTTCCTTSCHHHHHHH
T ss_pred             HhhC-----chhhhhhccCCHHHHhhh
Confidence            9988     8999999998    6666


Done!