Query 014768
Match_columns 419
No_of_seqs 267 out of 2885
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 17:28:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014768.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014768hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p1w_A Rabgdi protein; GDI RAB 100.0 3.7E-57 1.3E-61 435.4 42.2 416 1-417 17-445 (475)
2 2bcg_G Secretory pathway GDP d 100.0 1E-46 3.5E-51 367.5 41.8 414 1-416 8-428 (453)
3 1d5t_A Guanine nucleotide diss 100.0 2.3E-46 7.8E-51 362.7 40.7 414 1-416 3-417 (433)
4 1vg0_A RAB proteins geranylger 100.0 2.4E-45 8.3E-50 362.4 38.9 406 1-416 5-586 (650)
5 4dgk_A Phytoene dehydrogenase; 100.0 2.6E-41 9E-46 334.6 20.3 369 6-416 3-429 (501)
6 3ka7_A Oxidoreductase; structu 100.0 1.3E-26 4.5E-31 224.4 26.3 299 5-358 1-334 (425)
7 3nrn_A Uncharacterized protein 99.9 1.3E-25 4.6E-30 216.9 25.7 301 5-362 1-325 (421)
8 2vvm_A Monoamine oxidase N; FA 99.9 4.6E-23 1.6E-27 203.4 15.8 254 4-287 39-310 (495)
9 4gde_A UDP-galactopyranose mut 99.9 1.8E-23 6.2E-28 207.3 12.6 247 4-286 10-273 (513)
10 1s3e_A Amine oxidase [flavin-c 99.9 6.5E-22 2.2E-26 196.3 22.3 256 1-287 1-266 (520)
11 3nks_A Protoporphyrinogen oxid 99.9 3.2E-22 1.1E-26 196.5 17.9 250 5-287 3-288 (477)
12 2ivd_A PPO, PPOX, protoporphyr 99.9 1.1E-21 3.8E-26 192.6 21.1 315 3-358 15-375 (478)
13 2yg5_A Putrescine oxidase; oxi 99.9 1E-20 3.5E-25 184.4 19.5 251 1-287 1-266 (453)
14 3i6d_A Protoporphyrinogen oxid 99.9 3.2E-21 1.1E-25 188.9 15.4 251 1-287 1-287 (470)
15 1sez_A Protoporphyrinogen oxid 99.9 5.4E-21 1.9E-25 189.0 16.5 256 1-287 10-306 (504)
16 3lov_A Protoporphyrinogen oxid 99.8 2.5E-20 8.6E-25 182.8 18.7 250 4-287 4-287 (475)
17 4dsg_A UDP-galactopyranose mut 99.8 2.3E-19 7.9E-24 175.7 19.0 307 3-358 8-355 (484)
18 2b9w_A Putative aminooxidase; 99.8 7.2E-20 2.5E-24 176.9 13.5 247 2-287 4-256 (424)
19 1rsg_A FMS1 protein; FAD bindi 99.8 6.9E-19 2.4E-23 174.2 14.2 236 3-287 7-255 (516)
20 3k7m_X 6-hydroxy-L-nicotine ox 99.8 2E-18 6.9E-23 167.1 15.9 247 5-286 2-256 (431)
21 2e1m_A L-glutamate oxidase; L- 99.7 2E-17 7E-22 154.9 15.9 242 3-269 43-353 (376)
22 1v0j_A UDP-galactopyranose mut 99.7 9.2E-20 3.1E-24 174.3 -0.3 234 1-286 4-246 (399)
23 2iid_A L-amino-acid oxidase; f 99.7 5.3E-17 1.8E-21 160.1 19.1 246 3-287 32-296 (498)
24 2jae_A L-amino acid oxidase; o 99.7 2.8E-17 9.4E-22 161.7 16.7 265 2-287 9-294 (489)
25 1b37_A Protein (polyamine oxid 99.7 8E-17 2.7E-21 157.7 14.2 242 1-287 1-268 (472)
26 2bi7_A UDP-galactopyranose mut 99.7 1.8E-17 6.2E-22 157.4 8.3 228 1-286 1-235 (384)
27 3hdq_A UDP-galactopyranose mut 99.7 2.2E-17 7.6E-22 156.0 7.3 288 3-361 28-331 (397)
28 1i8t_A UDP-galactopyranose mut 99.6 1.6E-16 5.5E-21 149.9 5.4 227 4-286 1-232 (367)
29 4gut_A Lysine-specific histone 99.5 1.8E-13 6.1E-18 140.1 16.2 74 4-96 336-411 (776)
30 3dme_A Conserved exported prot 99.5 7.1E-14 2.4E-18 132.0 11.0 58 231-289 149-209 (369)
31 3dje_A Fructosyl amine: oxygen 99.5 5.3E-13 1.8E-17 129.2 14.9 66 223-289 148-221 (438)
32 2xag_A Lysine-specific histone 99.4 3E-12 1E-16 132.0 19.2 60 4-83 278-337 (852)
33 3nyc_A D-arginine dehydrogenas 99.4 1.4E-12 4.9E-17 123.6 15.6 64 224-289 143-209 (381)
34 2z3y_A Lysine-specific histone 99.4 1.9E-12 6.5E-17 131.4 17.2 60 4-83 107-166 (662)
35 3ayj_A Pro-enzyme of L-phenyla 99.4 2.8E-13 9.5E-18 135.9 7.6 80 4-96 56-162 (721)
36 3ps9_A TRNA 5-methylaminomethy 99.4 6.7E-12 2.3E-16 128.0 17.4 65 223-289 405-473 (676)
37 3v76_A Flavoprotein; structura 99.4 3.3E-12 1.1E-16 122.1 14.1 63 224-288 124-186 (417)
38 3qj4_A Renalase; FAD/NAD(P)-bi 99.4 2.6E-12 8.8E-17 120.1 13.0 58 224-286 104-162 (342)
39 1y56_B Sarcosine oxidase; dehy 99.4 8.3E-12 2.8E-16 118.5 14.4 65 224-289 138-205 (382)
40 1pj5_A N,N-dimethylglycine oxi 99.3 1.7E-11 5.9E-16 127.8 16.2 65 224-289 140-207 (830)
41 2gqf_A Hypothetical protein HI 99.3 1.2E-11 4.1E-16 117.8 13.7 63 226-289 103-168 (401)
42 3pvc_A TRNA 5-methylaminomethy 99.3 2.3E-11 7.8E-16 124.2 16.0 66 222-289 399-469 (689)
43 2oln_A NIKD protein; flavoprot 99.3 1.8E-11 6.2E-16 116.8 14.3 64 223-288 141-207 (397)
44 4at0_A 3-ketosteroid-delta4-5a 99.3 2.3E-11 7.9E-16 119.8 15.4 56 233-288 203-263 (510)
45 3kkj_A Amine oxidase, flavin-c 99.3 1.3E-12 4.6E-17 118.0 5.7 62 4-85 2-63 (336)
46 2gag_B Heterotetrameric sarcos 99.3 3.6E-11 1.2E-15 114.9 15.7 66 223-289 162-230 (405)
47 2i0z_A NAD(FAD)-utilizing dehy 99.3 1.4E-11 4.9E-16 119.3 10.5 63 225-288 126-190 (447)
48 1yvv_A Amine oxidase, flavin-c 99.3 1.6E-11 5.5E-16 114.3 10.5 44 4-47 2-45 (336)
49 2uzz_A N-methyl-L-tryptophan o 99.2 4.6E-11 1.6E-15 112.9 11.8 64 224-289 138-204 (372)
50 3da1_A Glycerol-3-phosphate de 99.2 1.5E-11 5.3E-16 122.2 8.4 66 223-289 159-232 (561)
51 2gf3_A MSOX, monomeric sarcosi 99.2 9E-11 3.1E-15 111.5 12.4 56 232-289 150-205 (389)
52 3axb_A Putative oxidoreductase 99.2 1.1E-10 3.8E-15 113.2 13.2 65 224-289 170-254 (448)
53 1qo8_A Flavocytochrome C3 fuma 99.2 1.2E-10 4E-15 116.3 13.1 62 226-288 241-311 (566)
54 1y0p_A Fumarate reductase flav 99.2 7.1E-10 2.4E-14 110.8 18.8 56 232-288 255-316 (571)
55 1ryi_A Glycine oxidase; flavop 99.2 1.4E-10 4.8E-15 110.0 12.9 65 223-289 152-219 (382)
56 3cgv_A Geranylgeranyl reductas 99.2 1.6E-10 5.5E-15 110.1 12.1 56 233-289 103-162 (397)
57 2rgh_A Alpha-glycerophosphate 99.1 2E-10 6.9E-15 114.4 11.5 57 232-289 188-250 (571)
58 3nlc_A Uncharacterized protein 99.1 1.3E-10 4.6E-15 114.2 8.0 57 232-289 220-277 (549)
59 3nix_A Flavoprotein/dehydrogen 99.1 7.5E-10 2.6E-14 106.3 12.0 56 233-288 107-165 (421)
60 1d4d_A Flavocytochrome C fumar 99.0 2.5E-09 8.5E-14 106.7 14.7 56 232-288 255-316 (572)
61 3i3l_A Alkylhalidase CMLS; fla 99.0 2.8E-09 9.7E-14 106.2 14.0 57 232-289 128-188 (591)
62 2wdq_A Succinate dehydrogenase 99.0 2.3E-09 7.8E-14 107.0 13.3 56 232-287 143-204 (588)
63 3lxd_A FAD-dependent pyridine 99.0 1.7E-09 5.7E-14 103.8 10.3 58 232-290 194-252 (415)
64 2h88_A Succinate dehydrogenase 99.0 5.5E-09 1.9E-13 104.5 13.4 55 232-287 155-215 (621)
65 3e1t_A Halogenase; flavoprotei 98.9 4.1E-09 1.4E-13 103.9 10.4 56 233-289 112-172 (512)
66 3oz2_A Digeranylgeranylglycero 98.9 6.1E-10 2.1E-14 105.8 3.6 41 3-43 3-43 (397)
67 3fg2_P Putative rubredoxin red 98.8 7.7E-09 2.6E-13 98.7 9.3 59 231-290 183-242 (404)
68 3t37_A Probable dehydrogenase; 98.8 6.7E-09 2.3E-13 102.7 8.7 37 3-39 16-53 (526)
69 3fpz_A Thiazole biosynthetic e 98.8 1.6E-09 5.6E-14 100.3 3.3 42 4-45 65-108 (326)
70 4gcm_A TRXR, thioredoxin reduc 98.8 2.5E-09 8.6E-14 98.3 3.7 43 1-44 2-45 (312)
71 4a5l_A Thioredoxin reductase; 98.7 4E-09 1.4E-13 97.0 3.8 38 1-38 1-38 (314)
72 4fk1_A Putative thioredoxin re 98.7 3.7E-09 1.3E-13 96.9 3.5 41 2-43 4-44 (304)
73 1n4w_A CHOD, cholesterol oxida 98.7 2.5E-08 8.5E-13 97.9 9.0 38 3-40 4-41 (504)
74 3oc4_A Oxidoreductase, pyridin 98.7 1.9E-08 6.4E-13 97.5 8.0 56 232-289 189-244 (452)
75 3iwa_A FAD-dependent pyridine 98.7 1.7E-07 6E-12 91.2 14.7 57 232-290 202-259 (472)
76 1coy_A Cholesterol oxidase; ox 98.7 5E-08 1.7E-12 95.8 10.3 58 231-288 225-292 (507)
77 1c0p_A D-amino acid oxidase; a 98.6 1.4E-08 4.9E-13 95.4 4.5 41 1-41 3-43 (363)
78 3qvp_A Glucose oxidase; oxidor 98.6 7.3E-08 2.5E-12 95.5 9.7 35 3-37 18-53 (583)
79 3l8k_A Dihydrolipoyl dehydroge 98.6 7.9E-09 2.7E-13 100.6 2.5 45 1-45 1-45 (466)
80 2jbv_A Choline oxidase; alcoho 98.6 6.8E-08 2.3E-12 95.6 9.2 39 3-41 12-51 (546)
81 3ab1_A Ferredoxin--NADP reduct 98.6 1.3E-08 4.6E-13 95.4 3.0 44 1-44 11-54 (360)
82 3urh_A Dihydrolipoyl dehydroge 98.6 1.2E-08 4.1E-13 100.0 2.6 44 2-45 23-66 (491)
83 2zbw_A Thioredoxin reductase; 98.6 1.6E-08 5.4E-13 93.9 2.9 44 1-44 2-45 (335)
84 3c96_A Flavin-containing monoo 98.6 2.4E-08 8.2E-13 95.5 4.1 41 1-41 1-42 (410)
85 3cty_A Thioredoxin reductase; 98.6 3E-08 1E-12 91.3 3.9 44 1-45 13-56 (319)
86 4a9w_A Monooxygenase; baeyer-v 98.5 2.9E-08 1E-12 92.7 3.6 43 3-45 2-44 (357)
87 1rp0_A ARA6, thiazole biosynth 98.5 4.1E-08 1.4E-12 88.9 4.3 42 3-44 38-80 (284)
88 4dna_A Probable glutathione re 98.5 2.4E-08 8.3E-13 97.1 3.0 56 232-289 211-268 (463)
89 3o0h_A Glutathione reductase; 98.5 2.5E-08 8.5E-13 97.5 2.7 56 232-289 232-288 (484)
90 2xdo_A TETX2 protein; tetracyc 98.5 5.1E-08 1.8E-12 92.8 4.8 41 2-42 24-64 (398)
91 2gv8_A Monooxygenase; FMO, FAD 98.5 5.9E-08 2E-12 93.9 5.0 44 2-45 4-49 (447)
92 1gpe_A Protein (glucose oxidas 98.5 2.8E-07 9.6E-12 91.9 9.9 37 3-39 23-60 (587)
93 3jsk_A Cypbp37 protein; octame 98.5 4.3E-08 1.5E-12 90.0 3.3 41 4-44 79-121 (344)
94 2q7v_A Thioredoxin reductase; 98.5 4.7E-08 1.6E-12 90.3 3.7 42 3-45 7-48 (325)
95 3f8d_A Thioredoxin reductase ( 98.5 5.1E-08 1.8E-12 89.7 3.9 40 4-45 15-54 (323)
96 3itj_A Thioredoxin reductase 1 98.5 4.4E-08 1.5E-12 90.8 3.3 44 3-46 21-68 (338)
97 2qcu_A Aerobic glycerol-3-phos 98.5 5.4E-08 1.9E-12 95.5 4.1 57 231-289 148-210 (501)
98 1v59_A Dihydrolipoamide dehydr 98.5 2.5E-08 8.6E-13 97.4 1.6 44 1-44 2-45 (478)
99 1ojt_A Surface protein; redox- 98.5 3.3E-08 1.1E-12 96.6 2.1 44 1-44 3-46 (482)
100 1mo9_A ORF3; nucleotide bindin 98.5 5.8E-08 2E-12 95.8 3.7 59 232-290 255-317 (523)
101 3atr_A Conserved archaeal prot 98.5 3.8E-08 1.3E-12 95.4 2.3 55 233-288 101-161 (453)
102 3lzw_A Ferredoxin--NADP reduct 98.5 3.9E-08 1.3E-12 91.0 2.2 41 4-44 7-47 (332)
103 2r9z_A Glutathione amide reduc 98.5 4.7E-08 1.6E-12 94.9 2.9 43 1-44 1-43 (463)
104 1zk7_A HGII, reductase, mercur 98.5 5.4E-08 1.9E-12 94.7 3.3 57 232-290 216-272 (467)
105 3rp8_A Flavoprotein monooxygen 98.5 6.8E-08 2.3E-12 92.2 3.8 38 3-40 22-59 (407)
106 1ges_A Glutathione reductase; 98.5 5.2E-08 1.8E-12 94.3 2.9 56 233-289 209-265 (450)
107 3qfa_A Thioredoxin reductase 1 98.5 7.1E-08 2.4E-12 95.0 3.7 44 2-45 30-81 (519)
108 2gjc_A Thiazole biosynthetic e 98.4 7.9E-08 2.7E-12 87.7 3.5 41 4-44 65-107 (326)
109 3pl8_A Pyranose 2-oxidase; sub 98.4 1E-07 3.4E-12 95.7 4.5 44 1-44 43-86 (623)
110 3alj_A 2-methyl-3-hydroxypyrid 98.4 1.2E-07 4E-12 89.7 4.3 39 4-42 11-49 (379)
111 3ic9_A Dihydrolipoamide dehydr 98.4 7E-08 2.4E-12 94.5 2.8 40 4-44 8-47 (492)
112 3lad_A Dihydrolipoamide dehydr 98.4 8.9E-08 3E-12 93.4 3.4 57 232-289 221-280 (476)
113 3c4n_A Uncharacterized protein 98.4 1E-07 3.5E-12 90.9 3.3 56 232-289 172-236 (405)
114 2qa1_A PGAE, polyketide oxygen 98.4 1.5E-07 5E-12 92.3 4.5 41 1-41 8-48 (500)
115 1trb_A Thioredoxin reductase; 98.4 9E-08 3.1E-12 88.1 2.8 56 233-289 185-247 (320)
116 2hqm_A GR, grase, glutathione 98.4 8.2E-08 2.8E-12 93.7 2.6 57 233-289 227-285 (479)
117 2qae_A Lipoamide, dihydrolipoy 98.4 9.2E-08 3.2E-12 93.1 2.9 41 4-44 2-42 (468)
118 1w4x_A Phenylacetone monooxyge 98.4 1.2E-07 4.3E-12 93.8 3.7 42 3-44 15-56 (542)
119 1chu_A Protein (L-aspartate ox 98.4 1.4E-07 4.7E-12 93.3 4.0 40 4-44 8-47 (540)
120 2cul_A Glucose-inhibited divis 98.4 1.3E-07 4.5E-12 82.8 3.1 53 235-289 71-125 (232)
121 2vou_A 2,6-dihydroxypyridine h 98.4 2.1E-07 7.2E-12 88.5 4.7 37 3-39 4-40 (397)
122 3r9u_A Thioredoxin reductase; 98.4 1.2E-07 4E-12 87.0 2.7 42 3-45 3-45 (315)
123 1dxl_A Dihydrolipoamide dehydr 98.4 1.3E-07 4.6E-12 92.0 3.2 43 2-44 4-46 (470)
124 3dk9_A Grase, GR, glutathione 98.4 8.8E-08 3E-12 93.5 1.9 41 3-44 19-59 (478)
125 2wpf_A Trypanothione reductase 98.4 8.6E-08 2.9E-12 93.9 1.9 56 233-289 236-292 (495)
126 2bs2_A Quinol-fumarate reducta 98.4 1.2E-07 4.1E-12 95.5 2.9 55 232-287 158-218 (660)
127 3dgz_A Thioredoxin reductase 2 98.3 1.7E-07 5.8E-12 91.7 3.6 42 3-44 5-54 (488)
128 3g3e_A D-amino-acid oxidase; F 98.3 1.1E-07 3.6E-12 88.9 2.0 38 5-42 1-44 (351)
129 3d1c_A Flavin-containing putat 98.3 1.7E-07 5.7E-12 88.1 3.4 41 3-44 3-44 (369)
130 3ihg_A RDME; flavoenzyme, anth 98.3 2.9E-07 9.8E-12 91.2 5.1 41 1-41 1-42 (535)
131 2a87_A TRXR, TR, thioredoxin r 98.3 1.7E-07 5.7E-12 87.0 3.2 43 2-45 12-54 (335)
132 4ap3_A Steroid monooxygenase; 98.3 1.7E-07 5.9E-12 92.7 3.4 43 3-45 20-62 (549)
133 2yqu_A 2-oxoglutarate dehydrog 98.3 1.5E-07 5E-12 91.3 2.7 56 232-289 208-264 (455)
134 1zmd_A Dihydrolipoyl dehydroge 98.3 1.4E-07 4.8E-12 91.9 2.6 42 3-44 5-46 (474)
135 2x3n_A Probable FAD-dependent 98.3 2.1E-07 7.3E-12 88.5 3.8 57 232-289 107-166 (399)
136 2gmh_A Electron transfer flavo 98.3 1.6E-07 5.4E-12 93.8 2.9 57 232-288 144-216 (584)
137 4hb9_A Similarities with proba 98.3 2.3E-07 7.8E-12 88.4 3.9 36 5-40 2-37 (412)
138 3gwf_A Cyclohexanone monooxyge 98.3 1.8E-07 6.3E-12 92.3 3.2 42 4-45 8-50 (540)
139 2vdc_G Glutamate synthase [NAD 98.3 2.1E-07 7.2E-12 89.9 3.4 41 4-44 122-162 (456)
140 3uox_A Otemo; baeyer-villiger 98.3 2.3E-07 8E-12 91.7 3.7 42 3-44 8-49 (545)
141 2aqj_A Tryptophan halogenase, 98.3 3.1E-07 1E-11 91.0 4.4 56 232-288 165-221 (538)
142 3k30_A Histamine dehydrogenase 98.3 2E-07 6.7E-12 95.1 3.1 43 3-45 390-432 (690)
143 1vdc_A NTR, NADPH dependent th 98.3 1.5E-07 5.3E-12 87.0 2.2 43 3-45 7-53 (333)
144 2bry_A NEDD9 interacting prote 98.3 3.3E-07 1.1E-11 89.7 4.6 40 3-42 91-130 (497)
145 2qa2_A CABE, polyketide oxygen 98.3 3.3E-07 1.1E-11 89.7 4.4 39 3-41 11-49 (499)
146 3fbs_A Oxidoreductase; structu 98.3 2.6E-07 8.7E-12 83.9 3.3 60 224-289 166-226 (297)
147 2a8x_A Dihydrolipoyl dehydroge 98.3 1.9E-07 6.4E-12 90.8 2.5 41 3-44 2-42 (464)
148 2r0c_A REBC; flavin adenine di 98.3 3.5E-07 1.2E-11 90.7 4.3 39 4-42 26-64 (549)
149 3fmw_A Oxygenase; mithramycin, 98.3 3.7E-07 1.3E-11 90.8 4.3 37 4-40 49-85 (570)
150 2eq6_A Pyruvate dehydrogenase 98.3 2.1E-07 7.1E-12 90.4 2.5 40 4-44 6-45 (464)
151 3dgh_A TRXR-1, thioredoxin red 98.3 3.4E-07 1.2E-11 89.5 3.6 57 232-289 227-289 (483)
152 1k0i_A P-hydroxybenzoate hydro 98.3 2.8E-07 9.7E-12 87.5 2.8 36 4-39 2-37 (394)
153 2xve_A Flavin-containing monoo 98.3 4E-07 1.4E-11 88.3 3.9 41 5-45 3-49 (464)
154 2q0l_A TRXR, thioredoxin reduc 98.3 4.4E-07 1.5E-11 83.1 3.9 40 5-45 2-42 (311)
155 2dkh_A 3-hydroxybenzoate hydro 98.3 5.8E-07 2E-11 90.8 5.1 38 3-40 31-69 (639)
156 1fec_A Trypanothione reductase 98.3 2.9E-07 9.9E-12 90.0 2.8 56 233-289 232-288 (490)
157 1xdi_A RV3303C-LPDA; reductase 98.2 2.7E-07 9.1E-12 90.5 1.6 55 233-289 224-279 (499)
158 3c4a_A Probable tryptophan hyd 98.2 4.9E-07 1.7E-11 85.4 3.4 35 5-39 1-37 (381)
159 3cp8_A TRNA uridine 5-carboxym 98.2 5.4E-07 1.8E-11 89.4 3.5 54 233-288 118-173 (641)
160 1lvl_A Dihydrolipoamide dehydr 98.2 3E-07 1E-11 89.2 1.6 41 3-44 4-44 (458)
161 1ebd_A E3BD, dihydrolipoamide 98.2 3.8E-07 1.3E-11 88.4 2.3 41 3-44 2-42 (455)
162 2e4g_A Tryptophan halogenase; 98.2 7.4E-07 2.5E-11 88.4 4.1 56 232-288 194-251 (550)
163 1onf_A GR, grase, glutathione 98.2 4.7E-07 1.6E-11 88.8 2.7 58 232-290 217-276 (500)
164 1o94_A Tmadh, trimethylamine d 98.2 7.1E-07 2.4E-11 91.4 4.0 42 4-45 389-430 (729)
165 3ihm_A Styrene monooxygenase A 98.2 5.2E-07 1.8E-11 86.7 2.8 34 4-37 22-55 (430)
166 2pyx_A Tryptophan halogenase; 98.2 6.8E-07 2.3E-11 88.3 3.3 56 232-288 175-232 (526)
167 2zxi_A TRNA uridine 5-carboxym 98.2 6.7E-07 2.3E-11 88.5 3.2 54 233-288 124-179 (637)
168 2e5v_A L-aspartate oxidase; ar 98.2 8.6E-07 3E-11 86.1 3.9 55 232-288 119-175 (472)
169 3ces_A MNMG, tRNA uridine 5-ca 98.2 9E-07 3.1E-11 87.9 4.0 54 233-288 125-180 (651)
170 1fl2_A Alkyl hydroperoxide red 98.2 9.8E-07 3.3E-11 80.7 3.9 39 4-44 1-39 (310)
171 3g5s_A Methylenetetrahydrofola 98.1 1.1E-06 3.9E-11 81.2 4.1 40 5-44 2-41 (443)
172 1y56_A Hypothetical protein PH 98.1 5.3E-07 1.8E-11 88.2 1.9 41 4-45 108-148 (493)
173 1ju2_A HydroxynitrIle lyase; f 98.1 7E-07 2.4E-11 88.2 2.7 38 3-41 25-62 (536)
174 3q9t_A Choline dehydrogenase a 98.1 1.2E-06 4.1E-11 86.8 4.4 36 3-38 5-41 (577)
175 2gag_A Heterotetrameric sarcos 98.1 6.9E-07 2.4E-11 94.2 2.8 41 4-44 128-168 (965)
176 4b1b_A TRXR, thioredoxin reduc 98.1 8.1E-07 2.8E-11 87.4 3.0 56 232-289 263-319 (542)
177 1kf6_A Fumarate reductase flav 98.1 6.8E-07 2.3E-11 89.4 2.4 56 232-288 134-196 (602)
178 2ywl_A Thioredoxin reductase r 98.1 1.3E-06 4.3E-11 73.2 3.4 33 5-37 2-34 (180)
179 3gyx_A Adenylylsulfate reducta 98.1 1E-06 3.4E-11 88.8 3.2 54 232-286 166-230 (662)
180 1ps9_A 2,4-dienoyl-COA reducta 98.1 1.5E-06 5.2E-11 88.3 4.4 41 4-44 373-413 (671)
181 1jnr_A Adenylylsulfate reducta 98.1 1.7E-06 5.8E-11 87.3 4.3 54 232-286 151-215 (643)
182 3s5w_A L-ornithine 5-monooxyge 98.1 1E-06 3.4E-11 85.6 2.5 40 4-43 30-74 (463)
183 1lqt_A FPRA; NADP+ derivative, 98.1 1.2E-06 4E-11 84.7 2.5 42 3-44 2-50 (456)
184 1q1r_A Putidaredoxin reductase 98.0 2.4E-06 8.2E-11 82.0 4.3 57 232-289 191-250 (431)
185 2weu_A Tryptophan 5-halogenase 98.0 1.3E-06 4.3E-11 86.0 2.1 56 232-288 173-229 (511)
186 1kdg_A CDH, cellobiose dehydro 98.0 2.3E-06 7.8E-11 84.9 3.9 37 3-39 6-42 (546)
187 2v3a_A Rubredoxin reductase; a 98.0 2.6E-06 8.8E-11 80.5 3.6 57 232-290 187-244 (384)
188 3kd9_A Coenzyme A disulfide re 98.0 2.4E-06 8E-11 82.6 3.4 54 233-289 191-244 (449)
189 1hyu_A AHPF, alkyl hydroperoxi 98.0 2.7E-06 9.4E-11 83.7 3.9 40 3-44 211-250 (521)
190 1gte_A Dihydropyrimidine dehyd 98.0 2.7E-06 9.2E-11 90.4 3.7 41 4-44 187-228 (1025)
191 2x8g_A Thioredoxin glutathione 98.0 2.3E-06 7.9E-11 85.8 3.1 34 3-36 106-139 (598)
192 1pn0_A Phenol 2-monooxygenase; 98.0 2.9E-06 9.8E-11 85.9 3.5 36 4-39 8-48 (665)
193 1cjc_A Protein (adrenodoxin re 97.9 3.3E-06 1.1E-10 81.7 2.7 42 3-44 5-48 (460)
194 3h28_A Sulfide-quinone reducta 97.9 3.5E-06 1.2E-10 80.9 2.8 39 5-43 3-43 (430)
195 1m6i_A Programmed cell death p 97.9 4.8E-06 1.6E-10 81.4 3.6 55 233-289 227-282 (493)
196 3fim_B ARYL-alcohol oxidase; A 97.9 5.3E-06 1.8E-10 82.0 3.5 37 4-40 2-39 (566)
197 3sx6_A Sulfide-quinone reducta 97.9 5.5E-06 1.9E-10 79.7 3.5 39 1-39 1-42 (437)
198 3ics_A Coenzyme A-disulfide re 97.9 5.5E-06 1.9E-10 82.9 3.4 54 232-289 228-282 (588)
199 2cdu_A NADPH oxidase; flavoenz 97.8 6E-06 2.1E-10 79.8 3.2 57 232-289 191-247 (452)
200 3ef6_A Toluene 1,2-dioxygenase 97.8 8.8E-06 3E-10 77.6 3.9 57 232-290 185-242 (410)
201 2gqw_A Ferredoxin reductase; f 97.8 7.6E-06 2.6E-10 77.9 3.2 51 233-289 188-239 (408)
202 3h8l_A NADH oxidase; membrane 97.8 5.1E-06 1.8E-10 79.2 1.6 52 232-289 218-270 (409)
203 2bc0_A NADH oxidase; flavoprot 97.8 7.9E-06 2.7E-10 79.8 2.8 56 232-289 236-291 (490)
204 1nhp_A NADH peroxidase; oxidor 97.8 8.8E-06 3E-10 78.5 3.0 56 232-289 191-246 (447)
205 1xhc_A NADH oxidase /nitrite r 97.8 1.4E-05 4.7E-10 75.0 4.2 51 233-290 184-235 (367)
206 3cgb_A Pyridine nucleotide-dis 97.7 1.1E-05 3.9E-10 78.5 3.2 56 232-289 227-282 (480)
207 3ntd_A FAD-dependent pyridine 97.6 1.8E-05 6E-10 78.9 3.0 58 232-289 192-267 (565)
208 3klj_A NAD(FAD)-dependent dehy 97.6 2.8E-05 9.6E-10 73.3 4.2 39 3-41 8-46 (385)
209 4g6h_A Rotenone-insensitive NA 97.5 4.3E-05 1.5E-09 74.7 4.1 56 232-289 272-332 (502)
210 3hyw_A Sulfide-quinone reducta 97.5 4E-05 1.4E-09 73.4 2.8 54 231-288 199-255 (430)
211 4eqs_A Coenzyme A disulfide re 97.5 4.3E-05 1.5E-09 73.4 3.0 52 232-289 188-240 (437)
212 3vrd_B FCCB subunit, flavocyto 97.4 5E-05 1.7E-09 72.1 2.5 38 5-42 3-42 (401)
213 4b63_A L-ornithine N5 monooxyg 97.0 8.3E-05 2.8E-09 72.7 -0.9 37 4-40 39-89 (501)
214 1nhp_A NADH peroxidase; oxidor 96.4 0.0023 8E-08 61.4 4.3 39 4-42 149-187 (447)
215 3klj_A NAD(FAD)-dependent dehy 96.3 0.0019 6.3E-08 60.8 3.2 38 5-42 147-184 (385)
216 4gcm_A TRXR, thioredoxin reduc 96.3 0.0028 9.6E-08 57.5 4.2 36 5-40 146-181 (312)
217 4e12_A Diketoreductase; oxidor 96.3 0.0027 9.3E-08 56.9 4.0 38 1-38 1-38 (283)
218 1lss_A TRK system potassium up 96.2 0.0026 9E-08 50.0 3.4 34 4-37 4-37 (140)
219 2g1u_A Hypothetical protein TM 96.2 0.0031 1E-07 50.9 3.5 34 5-38 20-53 (155)
220 3llv_A Exopolyphosphatase-rela 96.1 0.0024 8.3E-08 50.5 2.6 33 5-37 7-39 (141)
221 1id1_A Putative potassium chan 96.1 0.0039 1.3E-07 50.1 3.6 34 4-37 3-36 (153)
222 3fwz_A Inner membrane protein 96.1 0.0033 1.1E-07 49.7 3.1 34 5-38 8-41 (140)
223 1lvl_A Dihydrolipoamide dehydr 96.0 0.0033 1.1E-07 60.6 3.3 37 5-41 172-208 (458)
224 2eq6_A Pyruvate dehydrogenase 96.0 0.0039 1.3E-07 60.1 3.8 37 5-41 170-206 (464)
225 2v3a_A Rubredoxin reductase; a 95.9 0.0047 1.6E-07 58.0 4.0 40 4-43 145-184 (384)
226 3ado_A Lambda-crystallin; L-gu 95.9 0.0032 1.1E-07 57.1 2.7 34 5-38 7-40 (319)
227 1xhc_A NADH oxidase /nitrite r 95.9 0.0043 1.5E-07 57.8 3.7 37 5-41 144-180 (367)
228 2yqu_A 2-oxoglutarate dehydrog 95.9 0.0044 1.5E-07 59.6 3.8 37 5-41 168-204 (455)
229 1ebd_A E3BD, dihydrolipoamide 95.8 0.0048 1.6E-07 59.4 3.7 37 5-41 171-207 (455)
230 1v59_A Dihydrolipoamide dehydr 95.8 0.0054 1.8E-07 59.4 4.0 38 5-42 184-221 (478)
231 4a5l_A Thioredoxin reductase; 95.8 0.0059 2E-07 55.3 4.0 35 5-39 153-187 (314)
232 1bg6_A N-(1-D-carboxylethyl)-L 95.8 0.005 1.7E-07 57.1 3.5 37 1-37 1-37 (359)
233 3ic5_A Putative saccharopine d 95.7 0.0065 2.2E-07 46.0 3.3 33 5-37 6-39 (118)
234 1ges_A Glutathione reductase; 95.7 0.0064 2.2E-07 58.4 3.8 37 5-41 168-204 (450)
235 3qha_A Putative oxidoreductase 95.6 0.0078 2.7E-07 54.2 3.9 35 4-38 15-49 (296)
236 2gqw_A Ferredoxin reductase; f 95.6 0.0078 2.7E-07 57.0 4.0 39 4-42 145-183 (408)
237 2cdu_A NADPH oxidase; flavoenz 95.5 0.018 6.1E-07 55.3 6.4 37 5-41 1-39 (452)
238 2r9z_A Glutathione amide reduc 95.4 0.0088 3E-07 57.7 3.8 36 5-40 167-202 (463)
239 1f0y_A HCDH, L-3-hydroxyacyl-C 95.4 0.0094 3.2E-07 53.9 3.7 33 5-37 16-48 (302)
240 2ewd_A Lactate dehydrogenase,; 95.4 0.0085 2.9E-07 54.6 3.3 37 1-37 1-38 (317)
241 1q1r_A Putidaredoxin reductase 95.3 0.03 1E-06 53.3 7.0 40 1-40 1-42 (431)
242 3g79_A NDP-N-acetyl-D-galactos 95.3 0.0097 3.3E-07 57.1 3.5 36 3-38 17-54 (478)
243 2cul_A Glucose-inhibited divis 95.2 0.038 1.3E-06 47.7 6.9 36 3-38 2-37 (232)
244 2bc0_A NADH oxidase; flavoprot 95.2 0.011 3.7E-07 57.5 3.7 37 5-41 195-231 (490)
245 1zmd_A Dihydrolipoyl dehydroge 95.2 0.011 3.9E-07 57.0 3.8 37 5-41 179-215 (474)
246 3ic9_A Dihydrolipoamide dehydr 95.1 0.014 4.6E-07 56.8 4.2 38 5-42 175-212 (492)
247 1ojt_A Surface protein; redox- 95.1 0.0096 3.3E-07 57.7 3.1 37 5-41 186-222 (482)
248 2a8x_A Dihydrolipoyl dehydroge 95.1 0.012 4.1E-07 56.7 3.8 37 5-41 172-208 (464)
249 2dpo_A L-gulonate 3-dehydrogen 95.1 0.0092 3.1E-07 54.3 2.7 34 5-38 7-40 (319)
250 4e21_A 6-phosphogluconate dehy 95.1 0.012 4.1E-07 54.4 3.5 37 1-37 19-55 (358)
251 3i83_A 2-dehydropantoate 2-red 95.1 0.013 4.3E-07 53.5 3.6 33 5-37 3-35 (320)
252 3lk7_A UDP-N-acetylmuramoylala 95.1 0.014 4.7E-07 56.0 3.9 34 5-38 10-43 (451)
253 3ef6_A Toluene 1,2-dioxygenase 95.0 0.022 7.5E-07 53.9 5.2 38 5-42 3-42 (410)
254 2y0c_A BCEC, UDP-glucose dehyd 95.0 0.013 4.3E-07 56.6 3.5 34 4-37 8-41 (478)
255 3l4b_C TRKA K+ channel protien 95.0 0.008 2.7E-07 51.4 1.8 33 6-38 2-34 (218)
256 3c85_A Putative glutathione-re 95.0 0.0098 3.3E-07 49.3 2.3 33 5-37 40-73 (183)
257 1t2d_A LDH-P, L-lactate dehydr 95.0 0.016 5.4E-07 52.8 3.9 37 1-37 1-38 (322)
258 1mo9_A ORF3; nucleotide bindin 95.0 0.04 1.4E-06 53.9 7.0 44 1-44 40-83 (523)
259 3hn2_A 2-dehydropantoate 2-red 95.0 0.014 4.6E-07 53.1 3.4 33 5-37 3-35 (312)
260 3c4n_A Uncharacterized protein 95.0 0.013 4.4E-07 55.4 3.3 40 4-43 36-77 (405)
261 3gg2_A Sugar dehydrogenase, UD 94.9 0.014 4.8E-07 55.8 3.6 33 5-37 3-35 (450)
262 2q0l_A TRXR, thioredoxin reduc 94.9 0.017 5.8E-07 52.1 4.0 35 5-39 144-178 (311)
263 1zej_A HBD-9, 3-hydroxyacyl-CO 94.9 0.013 4.4E-07 52.5 3.0 33 4-37 12-44 (293)
264 2hmt_A YUAA protein; RCK, KTN, 94.9 0.012 4E-07 46.4 2.5 33 5-37 7-39 (144)
265 3kd9_A Coenzyme A disulfide re 94.9 0.018 6E-07 55.3 4.1 38 5-42 149-186 (449)
266 2qcu_A Aerobic glycerol-3-phos 94.9 0.033 1.1E-06 54.2 6.1 40 3-42 2-41 (501)
267 3gwf_A Cyclohexanone monooxyge 94.8 0.019 6.5E-07 56.4 4.1 34 5-38 179-212 (540)
268 1fl2_A Alkyl hydroperoxide red 94.8 0.018 6.3E-07 51.9 3.7 35 5-39 145-179 (310)
269 2e4g_A Tryptophan halogenase; 94.8 0.057 2E-06 53.2 7.6 36 3-38 24-62 (550)
270 3d1c_A Flavin-containing putat 94.8 0.015 5.2E-07 53.9 3.3 35 5-39 167-201 (369)
271 3oj0_A Glutr, glutamyl-tRNA re 94.8 0.027 9.1E-07 44.6 4.2 33 5-37 22-54 (144)
272 2weu_A Tryptophan 5-halogenase 94.7 0.064 2.2E-06 52.3 7.8 35 4-38 2-39 (511)
273 1dxl_A Dihydrolipoamide dehydr 94.7 0.011 3.7E-07 57.1 2.2 37 5-41 178-214 (470)
274 4eqs_A Coenzyme A disulfide re 94.7 0.014 4.9E-07 55.7 3.0 38 5-42 148-185 (437)
275 2gmh_A Electron transfer flavo 94.7 0.083 2.8E-06 52.4 8.6 40 4-43 35-80 (584)
276 3ghy_A Ketopantoate reductase 94.7 0.017 5.7E-07 53.1 3.3 33 4-36 3-35 (335)
277 2raf_A Putative dinucleotide-b 94.7 0.021 7E-07 48.5 3.7 34 5-38 20-53 (209)
278 1ks9_A KPA reductase;, 2-dehyd 94.7 0.019 6.5E-07 51.3 3.6 33 6-38 2-34 (291)
279 1vdc_A NTR, NADPH dependent th 94.7 0.022 7.6E-07 51.9 4.1 35 5-39 160-194 (333)
280 2x5o_A UDP-N-acetylmuramoylala 94.6 0.015 5.2E-07 55.5 3.0 37 5-41 6-42 (439)
281 2q7v_A Thioredoxin reductase; 94.6 0.024 8.1E-07 51.6 4.2 36 5-40 153-188 (325)
282 4g65_A TRK system potassium up 94.6 0.019 6.5E-07 55.1 3.6 35 4-38 3-37 (461)
283 1fec_A Trypanothione reductase 94.6 0.047 1.6E-06 52.9 6.5 42 3-44 2-52 (490)
284 3uox_A Otemo; baeyer-villiger 94.6 0.021 7.1E-07 56.2 3.9 35 5-39 186-220 (545)
285 2wpf_A Trypanothione reductase 94.6 0.049 1.7E-06 52.9 6.5 44 1-44 4-56 (495)
286 1xdi_A RV3303C-LPDA; reductase 94.6 0.054 1.8E-06 52.6 6.8 40 4-44 2-44 (499)
287 2x3n_A Probable FAD-dependent 94.6 0.062 2.1E-06 50.4 7.0 36 4-39 6-41 (399)
288 2qae_A Lipoamide, dihydrolipoy 94.6 0.021 7.1E-07 55.1 3.8 37 5-41 175-211 (468)
289 3cky_A 2-hydroxymethyl glutara 94.6 0.022 7.7E-07 51.2 3.7 37 1-37 1-37 (301)
290 2a87_A TRXR, TR, thioredoxin r 94.5 0.025 8.7E-07 51.7 4.1 35 5-39 156-190 (335)
291 2zbw_A Thioredoxin reductase; 94.5 0.026 9.1E-07 51.5 4.2 35 5-39 153-187 (335)
292 1evy_A Glycerol-3-phosphate de 94.5 0.018 6.3E-07 53.5 3.1 32 6-37 17-48 (366)
293 4a7p_A UDP-glucose dehydrogena 94.5 0.022 7.6E-07 54.2 3.7 35 4-38 8-42 (446)
294 3fg2_P Putative rubredoxin red 94.5 0.025 8.7E-07 53.3 4.1 39 5-43 143-181 (404)
295 2ew2_A 2-dehydropantoate 2-red 94.5 0.021 7.2E-07 51.7 3.4 33 5-37 4-36 (316)
296 2q3e_A UDP-glucose 6-dehydroge 94.5 0.02 6.8E-07 55.2 3.3 37 1-37 2-40 (467)
297 3doj_A AT3G25530, dehydrogenas 94.5 0.024 8.3E-07 51.3 3.7 34 5-38 22-55 (310)
298 4dna_A Probable glutathione re 94.5 0.054 1.9E-06 52.0 6.4 43 1-44 1-44 (463)
299 3lxd_A FAD-dependent pyridine 94.4 0.026 9E-07 53.4 4.1 40 4-43 152-191 (415)
300 3mog_A Probable 3-hydroxybutyr 94.4 0.021 7.3E-07 55.0 3.4 35 4-38 5-39 (483)
301 3k6j_A Protein F01G10.3, confi 94.4 0.022 7.7E-07 54.2 3.4 34 5-38 55-88 (460)
302 2hqm_A GR, grase, glutathione 94.4 0.06 2.1E-06 52.0 6.6 42 2-44 9-50 (479)
303 2xve_A Flavin-containing monoo 94.3 0.025 8.4E-07 54.5 3.7 36 5-40 198-233 (464)
304 3atr_A Conserved archaeal prot 94.3 0.079 2.7E-06 50.7 7.2 38 2-39 4-41 (453)
305 1zcj_A Peroxisomal bifunctiona 94.3 0.03 1E-06 53.8 4.2 33 5-37 38-70 (463)
306 3k96_A Glycerol-3-phosphate de 94.3 0.026 8.9E-07 52.2 3.6 34 4-37 29-62 (356)
307 2ywl_A Thioredoxin reductase r 94.3 0.12 4.2E-06 42.2 7.4 54 232-289 56-110 (180)
308 1trb_A Thioredoxin reductase; 94.2 0.089 3E-06 47.5 7.1 43 1-44 2-44 (320)
309 3o0h_A Glutathione reductase; 94.2 0.069 2.4E-06 51.6 6.6 41 4-45 26-66 (484)
310 3cty_A Thioredoxin reductase; 94.2 0.031 1.1E-06 50.6 3.9 35 5-39 156-190 (319)
311 1m6i_A Programmed cell death p 94.2 0.063 2.2E-06 52.1 6.3 40 1-40 8-49 (493)
312 3dfz_A SIRC, precorrin-2 dehyd 94.2 0.031 1.1E-06 47.7 3.5 33 4-36 31-63 (223)
313 3tl2_A Malate dehydrogenase; c 94.2 0.031 1.1E-06 50.6 3.7 35 3-37 7-42 (315)
314 4dio_A NAD(P) transhydrogenase 94.2 0.029 9.8E-07 52.4 3.5 35 4-38 190-224 (405)
315 4ap3_A Steroid monooxygenase; 94.1 0.022 7.4E-07 56.1 2.8 35 5-39 192-226 (549)
316 1mv8_A GMD, GDP-mannose 6-dehy 94.1 0.029 9.8E-07 53.6 3.6 32 6-37 2-33 (436)
317 1kyq_A Met8P, siroheme biosynt 94.1 0.019 6.7E-07 50.6 2.2 35 4-38 13-47 (274)
318 1pzg_A LDH, lactate dehydrogen 94.1 0.028 9.6E-07 51.4 3.4 33 5-37 10-43 (331)
319 3dk9_A Grase, GR, glutathione 94.1 0.03 1E-06 54.1 3.8 36 5-40 188-223 (478)
320 3urh_A Dihydrolipoyl dehydroge 94.1 0.024 8.3E-07 55.0 3.1 37 5-41 199-235 (491)
321 2gv8_A Monooxygenase; FMO, FAD 94.1 0.031 1.1E-06 53.5 3.7 35 5-39 213-248 (447)
322 3l8k_A Dihydrolipoyl dehydroge 94.0 0.037 1.3E-06 53.2 4.2 38 5-42 173-210 (466)
323 3oc4_A Oxidoreductase, pyridin 94.0 0.036 1.2E-06 53.1 4.0 38 5-42 148-185 (452)
324 3g17_A Similar to 2-dehydropan 93.9 0.02 6.8E-07 51.5 1.9 33 5-37 3-35 (294)
325 3pid_A UDP-glucose 6-dehydroge 93.9 0.036 1.2E-06 52.4 3.7 33 5-38 37-69 (432)
326 1zk7_A HGII, reductase, mercur 93.8 0.095 3.3E-06 50.4 6.8 43 1-44 1-43 (467)
327 4huj_A Uncharacterized protein 93.8 0.017 5.7E-07 49.5 1.2 35 4-38 23-58 (220)
328 1lld_A L-lactate dehydrogenase 93.8 0.038 1.3E-06 50.2 3.5 33 5-37 8-42 (319)
329 3pef_A 6-phosphogluconate dehy 93.7 0.037 1.2E-06 49.5 3.3 34 5-38 2-35 (287)
330 2bs2_A Quinol-fumarate reducta 93.7 0.11 3.7E-06 52.3 7.1 42 3-44 4-45 (660)
331 2uyy_A N-PAC protein; long-cha 93.7 0.038 1.3E-06 50.2 3.5 35 4-38 30-64 (316)
332 2izz_A Pyrroline-5-carboxylate 93.7 0.032 1.1E-06 50.8 3.0 37 1-37 19-59 (322)
333 1z82_A Glycerol-3-phosphate de 93.7 0.039 1.3E-06 50.6 3.5 34 4-37 14-47 (335)
334 2aqj_A Tryptophan halogenase, 93.7 0.12 4E-06 50.8 7.2 40 1-40 2-44 (538)
335 3eag_A UDP-N-acetylmuramate:L- 93.7 0.049 1.7E-06 49.7 4.1 34 5-38 5-39 (326)
336 3g0o_A 3-hydroxyisobutyrate de 93.7 0.04 1.4E-06 49.7 3.5 34 4-37 7-40 (303)
337 3dtt_A NADP oxidoreductase; st 93.6 0.042 1.4E-06 47.9 3.4 35 4-38 19-53 (245)
338 1onf_A GR, grase, glutathione 93.6 0.16 5.5E-06 49.3 7.9 40 4-44 2-41 (500)
339 1rp0_A ARA6, thiazole biosynth 93.6 0.13 4.4E-06 45.8 6.6 56 232-288 119-190 (284)
340 3vtf_A UDP-glucose 6-dehydroge 93.6 0.036 1.2E-06 52.5 3.1 33 5-37 22-54 (444)
341 3cgb_A Pyridine nucleotide-dis 93.6 0.14 4.7E-06 49.5 7.3 38 5-42 37-76 (480)
342 3ego_A Probable 2-dehydropanto 93.6 0.044 1.5E-06 49.5 3.6 32 5-37 3-34 (307)
343 3hwr_A 2-dehydropantoate 2-red 93.5 0.042 1.4E-06 50.0 3.4 32 5-37 20-51 (318)
344 3l6d_A Putative oxidoreductase 93.5 0.046 1.6E-06 49.4 3.6 35 4-38 9-43 (306)
345 2hjr_A Malate dehydrogenase; m 93.5 0.048 1.6E-06 49.7 3.8 33 5-37 15-48 (328)
346 3p2y_A Alanine dehydrogenase/p 93.5 0.035 1.2E-06 51.4 2.8 34 4-37 184-217 (381)
347 3s5w_A L-ornithine 5-monooxyge 93.5 0.032 1.1E-06 53.6 2.6 36 4-39 227-264 (463)
348 2zxi_A TRNA uridine 5-carboxym 93.4 0.17 5.7E-06 50.2 7.7 39 3-41 26-65 (637)
349 4dll_A 2-hydroxy-3-oxopropiona 93.4 0.053 1.8E-06 49.3 3.9 33 5-37 32-64 (320)
350 2x8g_A Thioredoxin glutathione 93.4 0.037 1.3E-06 55.1 3.1 32 5-36 287-318 (598)
351 1dlj_A UDP-glucose dehydrogena 93.4 0.048 1.6E-06 51.4 3.6 31 6-37 2-32 (402)
352 3ics_A Coenzyme A-disulfide re 93.4 0.053 1.8E-06 53.9 4.1 38 5-42 188-225 (588)
353 2v6b_A L-LDH, L-lactate dehydr 93.3 0.05 1.7E-06 49.1 3.4 32 6-37 2-35 (304)
354 2aef_A Calcium-gated potassium 93.2 0.038 1.3E-06 47.7 2.4 34 4-38 9-42 (234)
355 3ces_A MNMG, tRNA uridine 5-ca 93.2 0.18 6.1E-06 50.2 7.5 38 3-40 27-65 (651)
356 1hyu_A AHPF, alkyl hydroperoxi 93.1 0.041 1.4E-06 53.8 2.8 36 5-40 356-391 (521)
357 2pyx_A Tryptophan halogenase; 93.1 0.2 6.8E-06 49.0 7.8 37 3-39 6-54 (526)
358 2h78_A Hibadh, 3-hydroxyisobut 93.1 0.06 2.1E-06 48.4 3.7 33 5-37 4-36 (302)
359 3l9w_A Glutathione-regulated p 93.1 0.04 1.4E-06 52.0 2.5 35 4-38 4-38 (413)
360 4ezb_A Uncharacterized conserv 93.1 0.047 1.6E-06 49.6 2.9 33 5-37 25-58 (317)
361 2qyt_A 2-dehydropantoate 2-red 93.0 0.036 1.2E-06 50.3 2.1 31 5-35 9-45 (317)
362 3dfu_A Uncharacterized protein 93.0 0.037 1.3E-06 47.5 2.0 34 4-37 6-39 (232)
363 1txg_A Glycerol-3-phosphate de 93.0 0.043 1.5E-06 50.2 2.6 30 6-35 2-31 (335)
364 1jay_A Coenzyme F420H2:NADP+ o 93.0 0.065 2.2E-06 45.3 3.6 32 6-37 2-34 (212)
365 3pdu_A 3-hydroxyisobutyrate de 93.0 0.041 1.4E-06 49.2 2.4 33 6-38 3-35 (287)
366 2vns_A Metalloreductase steap3 93.0 0.056 1.9E-06 46.0 3.1 33 5-37 29-61 (215)
367 3ojo_A CAP5O; rossmann fold, c 92.9 0.061 2.1E-06 50.9 3.5 34 5-38 12-45 (431)
368 3dgz_A Thioredoxin reductase 2 92.9 0.062 2.1E-06 52.0 3.7 33 5-37 186-218 (488)
369 3qfa_A Thioredoxin reductase 1 92.9 0.062 2.1E-06 52.5 3.7 32 5-36 211-242 (519)
370 1guz_A Malate dehydrogenase; o 92.8 0.065 2.2E-06 48.5 3.5 32 6-37 2-35 (310)
371 3gvi_A Malate dehydrogenase; N 92.8 0.071 2.4E-06 48.4 3.7 34 4-37 7-41 (324)
372 2a9f_A Putative malic enzyme ( 92.8 0.053 1.8E-06 50.1 2.8 34 4-37 188-222 (398)
373 3fbs_A Oxidoreductase; structu 92.8 0.086 3E-06 46.9 4.3 33 5-38 142-174 (297)
374 3qsg_A NAD-binding phosphogluc 92.7 0.051 1.8E-06 49.2 2.7 33 5-37 25-58 (312)
375 3r9u_A Thioredoxin reductase; 92.7 0.074 2.5E-06 47.8 3.7 35 5-39 148-182 (315)
376 4gbj_A 6-phosphogluconate dehy 92.7 0.068 2.3E-06 48.0 3.4 33 6-38 7-39 (297)
377 2zyd_A 6-phosphogluconate dehy 92.6 0.067 2.3E-06 51.5 3.5 35 3-37 14-48 (480)
378 3f8d_A Thioredoxin reductase ( 92.6 0.066 2.2E-06 48.3 3.3 37 5-41 155-191 (323)
379 1ur5_A Malate dehydrogenase; o 92.6 0.076 2.6E-06 48.0 3.7 33 5-37 3-36 (309)
380 2pv7_A T-protein [includes: ch 92.6 0.072 2.5E-06 47.9 3.5 33 6-38 23-56 (298)
381 1y6j_A L-lactate dehydrogenase 92.6 0.071 2.4E-06 48.4 3.4 34 4-37 7-42 (318)
382 3lzw_A Ferredoxin--NADP reduct 92.6 0.091 3.1E-06 47.6 4.2 36 5-40 155-190 (332)
383 3c7a_A Octopine dehydrogenase; 92.6 0.056 1.9E-06 50.9 2.8 30 5-34 3-33 (404)
384 2o3j_A UDP-glucose 6-dehydroge 92.6 0.062 2.1E-06 51.9 3.2 33 5-37 10-44 (481)
385 3dhn_A NAD-dependent epimerase 92.5 0.064 2.2E-06 45.8 3.0 38 1-38 1-39 (227)
386 3iwa_A FAD-dependent pyridine 92.5 0.061 2.1E-06 51.8 3.1 37 5-41 160-197 (472)
387 2vdc_G Glutamate synthase [NAD 92.5 0.074 2.5E-06 51.0 3.6 35 5-39 265-300 (456)
388 3itj_A Thioredoxin reductase 1 92.5 0.16 5.5E-06 46.1 5.7 54 235-289 211-271 (338)
389 2wtb_A MFP2, fatty acid multif 92.4 0.069 2.4E-06 54.3 3.4 33 5-37 313-345 (725)
390 1vl6_A Malate oxidoreductase; 92.4 0.064 2.2E-06 49.5 2.8 33 4-36 192-225 (388)
391 4a9w_A Monooxygenase; baeyer-v 92.4 0.21 7.1E-06 45.6 6.4 55 232-287 76-130 (357)
392 1x13_A NAD(P) transhydrogenase 92.3 0.072 2.5E-06 50.1 3.2 34 5-38 173-206 (401)
393 3p7m_A Malate dehydrogenase; p 92.3 0.095 3.3E-06 47.5 3.9 34 4-37 5-39 (321)
394 1kf6_A Fumarate reductase flav 92.3 0.22 7.6E-06 49.5 6.9 40 4-43 5-46 (602)
395 3ab1_A Ferredoxin--NADP reduct 92.3 0.22 7.5E-06 45.8 6.4 58 232-290 202-264 (360)
396 1vpd_A Tartronate semialdehyde 92.2 0.087 3E-06 47.2 3.6 33 5-37 6-38 (299)
397 4gwg_A 6-phosphogluconate dehy 92.2 0.083 2.9E-06 50.8 3.5 35 3-37 3-37 (484)
398 1x0v_A GPD-C, GPDH-C, glycerol 92.2 0.048 1.6E-06 50.3 1.8 35 4-38 8-49 (354)
399 1edz_A 5,10-methylenetetrahydr 92.1 0.11 3.9E-06 46.7 4.0 32 5-36 178-210 (320)
400 3c24_A Putative oxidoreductase 92.1 0.1 3.5E-06 46.5 3.7 33 5-37 12-45 (286)
401 3ntd_A FAD-dependent pyridine 92.0 0.23 7.9E-06 48.9 6.6 37 5-41 2-40 (565)
402 2gf2_A Hibadh, 3-hydroxyisobut 92.0 0.094 3.2E-06 46.9 3.5 32 6-37 2-33 (296)
403 3gpi_A NAD-dependent epimerase 92.0 0.093 3.2E-06 46.6 3.4 35 4-38 3-37 (286)
404 1nyt_A Shikimate 5-dehydrogena 92.0 0.1 3.5E-06 46.1 3.6 33 5-37 120-152 (271)
405 3pqe_A L-LDH, L-lactate dehydr 91.9 0.091 3.1E-06 47.8 3.2 36 1-36 1-39 (326)
406 1l7d_A Nicotinamide nucleotide 91.9 0.096 3.3E-06 48.9 3.5 34 5-38 173-206 (384)
407 2f1k_A Prephenate dehydrogenas 91.9 0.097 3.3E-06 46.4 3.4 32 6-37 2-33 (279)
408 2rcy_A Pyrroline carboxylate r 91.9 0.073 2.5E-06 46.7 2.6 35 4-38 4-42 (262)
409 3ggo_A Prephenate dehydrogenas 91.8 0.11 3.9E-06 46.9 3.8 33 5-37 34-68 (314)
410 2p4q_A 6-phosphogluconate dehy 91.7 0.098 3.3E-06 50.6 3.4 34 4-37 10-43 (497)
411 3ihg_A RDME; flavoenzyme, anth 91.7 0.31 1.1E-05 47.7 7.1 57 232-289 120-183 (535)
412 1a5z_A L-lactate dehydrogenase 91.7 0.083 2.8E-06 48.0 2.7 32 6-37 2-35 (319)
413 3zwc_A Peroxisomal bifunctiona 91.6 0.087 3E-06 53.4 3.1 34 5-38 317-350 (742)
414 2iz1_A 6-phosphogluconate dehy 91.6 0.11 3.6E-06 50.1 3.6 34 4-37 5-38 (474)
415 1yqg_A Pyrroline-5-carboxylate 91.6 0.087 3E-06 46.2 2.8 32 6-37 2-34 (263)
416 1pjc_A Protein (L-alanine dehy 91.6 0.1 3.6E-06 48.2 3.3 33 5-37 168-200 (361)
417 1jw9_B Molybdopterin biosynthe 91.5 0.089 3E-06 45.9 2.7 33 5-37 32-65 (249)
418 1cjc_A Protein (adrenodoxin re 91.5 0.12 4.2E-06 49.5 3.9 46 245-290 270-334 (460)
419 1hdo_A Biliverdin IX beta redu 91.5 0.13 4.3E-06 43.0 3.6 36 1-37 1-37 (206)
420 3ius_A Uncharacterized conserv 91.5 0.12 4E-06 45.9 3.5 33 5-37 6-38 (286)
421 1o94_A Tmadh, trimethylamine d 91.4 0.11 3.7E-06 53.0 3.6 36 5-41 529-566 (729)
422 3d0o_A L-LDH 1, L-lactate dehy 91.4 0.1 3.5E-06 47.3 3.0 35 3-37 5-41 (317)
423 3tri_A Pyrroline-5-carboxylate 91.4 0.12 4E-06 46.0 3.4 34 4-37 3-39 (280)
424 3lad_A Dihydrolipoamide dehydr 91.4 0.35 1.2E-05 46.5 7.0 41 3-43 2-42 (476)
425 3ktd_A Prephenate dehydrogenas 91.4 0.11 3.7E-06 47.6 3.1 33 5-37 9-41 (341)
426 3phh_A Shikimate dehydrogenase 91.3 0.13 4.5E-06 45.2 3.6 34 5-38 119-152 (269)
427 1chu_A Protein (L-aspartate ox 91.3 0.18 6.3E-06 49.4 4.9 57 232-288 138-207 (540)
428 1ez4_A Lactate dehydrogenase; 91.2 0.11 3.7E-06 47.2 3.0 37 1-37 2-40 (318)
429 1p77_A Shikimate 5-dehydrogena 91.2 0.11 3.8E-06 45.9 3.0 33 5-37 120-152 (272)
430 3alj_A 2-methyl-3-hydroxypyrid 91.2 0.41 1.4E-05 44.3 7.1 53 232-289 107-160 (379)
431 1wdk_A Fatty oxidation complex 91.2 0.084 2.9E-06 53.6 2.4 33 5-37 315-347 (715)
432 2e5v_A L-aspartate oxidase; ar 91.2 0.24 8.2E-06 47.7 5.6 37 6-43 1-37 (472)
433 1k0i_A P-hydroxybenzoate hydro 91.2 0.48 1.6E-05 44.1 7.6 57 232-289 103-163 (394)
434 2eez_A Alanine dehydrogenase; 91.1 0.12 4.2E-06 47.9 3.3 33 5-37 167-199 (369)
435 2cvz_A Dehydrogenase, 3-hydrox 91.1 0.13 4.6E-06 45.7 3.5 31 6-37 3-33 (289)
436 2pgd_A 6-phosphogluconate dehy 91.1 0.12 4.2E-06 49.8 3.3 33 5-37 3-35 (482)
437 1yj8_A Glycerol-3-phosphate de 91.0 0.08 2.7E-06 49.3 1.9 34 5-38 22-62 (375)
438 1hyh_A L-hicdh, L-2-hydroxyiso 91.0 0.11 3.6E-06 47.0 2.7 32 6-37 3-36 (309)
439 2egg_A AROE, shikimate 5-dehyd 91.0 0.16 5.5E-06 45.5 3.9 33 5-37 142-175 (297)
440 3d1l_A Putative NADP oxidoredu 90.9 0.11 3.7E-06 45.8 2.5 33 5-37 11-44 (266)
441 1pgj_A 6PGDH, 6-PGDH, 6-phosph 90.8 0.13 4.4E-06 49.6 3.2 32 6-37 3-34 (478)
442 3gt0_A Pyrroline-5-carboxylate 90.8 0.14 4.9E-06 44.4 3.3 33 5-37 3-39 (247)
443 2gag_A Heterotetrameric sarcos 90.8 0.095 3.2E-06 55.3 2.5 37 5-41 285-321 (965)
444 2ahr_A Putative pyrroline carb 90.8 0.17 5.9E-06 44.2 3.8 33 5-37 4-36 (259)
445 1y56_A Hypothetical protein PH 90.8 0.2 6.9E-06 48.5 4.6 49 240-290 265-314 (493)
446 2g5c_A Prephenate dehydrogenas 90.7 0.15 5.2E-06 45.2 3.4 32 6-37 3-36 (281)
447 3cp8_A TRNA uridine 5-carboxym 90.6 0.41 1.4E-05 47.6 6.6 39 3-41 20-59 (641)
448 3ew7_A LMO0794 protein; Q8Y8U8 90.6 0.17 5.7E-06 42.8 3.4 32 6-37 2-34 (221)
449 3ond_A Adenosylhomocysteinase; 90.5 0.15 5.1E-06 48.7 3.3 34 4-37 265-298 (488)
450 2qa2_A CABE, polyketide oxygen 90.4 0.6 2.1E-05 45.2 7.6 55 232-288 107-165 (499)
451 1pjq_A CYSG, siroheme synthase 90.4 0.15 5.1E-06 48.8 3.2 33 4-36 12-44 (457)
452 1oju_A MDH, malate dehydrogena 90.3 0.14 4.6E-06 45.9 2.7 32 6-37 2-35 (294)
453 4ffl_A PYLC; amino acid, biosy 90.2 0.19 6.5E-06 46.4 3.8 33 6-38 3-35 (363)
454 2vhw_A Alanine dehydrogenase; 90.2 0.17 5.8E-06 47.1 3.3 33 5-37 169-201 (377)
455 1i36_A Conserved hypothetical 90.1 0.16 5.5E-06 44.5 3.0 30 6-35 2-31 (264)
456 1yb4_A Tartronic semialdehyde 90.1 0.14 4.9E-06 45.7 2.7 32 5-37 4-35 (295)
457 3h8l_A NADH oxidase; membrane 90.1 0.3 1E-05 45.9 5.1 38 5-42 2-42 (409)
458 4b4o_A Epimerase family protei 90.1 0.21 7.3E-06 44.5 3.9 34 6-39 2-36 (298)
459 2hk9_A Shikimate dehydrogenase 90.1 0.15 5E-06 45.2 2.7 33 5-37 130-162 (275)
460 1y7t_A Malate dehydrogenase; N 90.1 0.16 5.6E-06 46.2 3.1 37 1-37 1-45 (327)
461 3nep_X Malate dehydrogenase; h 90.0 0.15 5.3E-06 45.9 2.9 32 6-37 2-35 (314)
462 1lnq_A MTHK channels, potassiu 90.0 0.17 5.9E-06 46.2 3.2 33 5-38 116-148 (336)
463 3enk_A UDP-glucose 4-epimerase 90.0 0.23 8E-06 45.2 4.1 38 1-38 2-40 (341)
464 1gte_A Dihydropyrimidine dehyd 89.9 0.17 5.8E-06 53.8 3.5 33 6-38 334-367 (1025)
465 2qa1_A PGAE, polyketide oxygen 89.9 0.63 2.2E-05 45.0 7.3 55 232-288 106-164 (500)
466 1nvt_A Shikimate 5'-dehydrogen 89.9 0.23 7.7E-06 44.3 3.8 32 5-37 129-160 (287)
467 3k30_A Histamine dehydrogenase 89.8 0.19 6.5E-06 50.9 3.7 39 5-43 524-564 (690)
468 3rp8_A Flavoprotein monooxygen 89.8 0.47 1.6E-05 44.5 6.2 53 232-288 127-180 (407)
469 2yjz_A Metalloreductase steap4 89.3 0.062 2.1E-06 45.2 0.0 34 5-38 20-53 (201)
470 1np3_A Ketol-acid reductoisome 89.8 0.19 6.4E-06 46.0 3.3 33 5-37 17-49 (338)
471 3e8x_A Putative NAD-dependent 89.7 0.2 6.8E-06 43.0 3.3 34 4-37 21-55 (236)
472 3h2s_A Putative NADH-flavin re 89.7 0.21 7.1E-06 42.4 3.3 32 6-37 2-34 (224)
473 3oz2_A Digeranylgeranylglycero 89.7 0.77 2.6E-05 42.4 7.6 55 233-288 103-161 (397)
474 2i6t_A Ubiquitin-conjugating e 89.7 0.16 5.5E-06 45.6 2.7 34 5-38 15-50 (303)
475 4hv4_A UDP-N-acetylmuramate--L 89.6 0.21 7.1E-06 48.4 3.6 33 5-37 23-56 (494)
476 3don_A Shikimate dehydrogenase 89.5 0.17 5.8E-06 44.8 2.7 33 5-37 118-151 (277)
477 3ldh_A Lactate dehydrogenase; 89.5 0.19 6.4E-06 45.6 3.0 33 5-37 22-56 (330)
478 3vps_A TUNA, NAD-dependent epi 89.5 0.22 7.5E-06 44.8 3.5 35 4-38 7-42 (321)
479 1jnr_A Adenylylsulfate reducta 89.4 0.6 2.1E-05 46.8 6.9 36 4-39 22-61 (643)
480 1qyc_A Phenylcoumaran benzylic 89.4 0.25 8.6E-06 44.2 3.8 38 1-38 1-39 (308)
481 2rir_A Dipicolinate synthase, 89.4 0.24 8.1E-06 44.5 3.6 33 5-37 158-190 (300)
482 1ldn_A L-lactate dehydrogenase 89.4 0.21 7.1E-06 45.3 3.2 34 4-37 6-41 (316)
483 1a4i_A Methylenetetrahydrofola 89.3 0.29 9.8E-06 43.5 3.9 33 4-36 165-198 (301)
484 2qrj_A Saccharopine dehydrogen 89.2 0.15 5.1E-06 47.3 2.1 39 4-42 214-257 (394)
485 3d4o_A Dipicolinate synthase s 89.1 0.25 8.7E-06 44.1 3.6 34 4-37 155-188 (293)
486 1b0a_A Protein (fold bifunctio 89.0 0.35 1.2E-05 42.6 4.2 33 4-36 159-192 (288)
487 4aj2_A L-lactate dehydrogenase 89.0 0.28 9.6E-06 44.6 3.7 33 4-36 19-53 (331)
488 1qyd_A Pinoresinol-lariciresin 88.9 0.28 9.7E-06 44.0 3.8 38 1-38 1-39 (313)
489 4a26_A Putative C-1-tetrahydro 88.9 0.32 1.1E-05 43.1 4.0 33 4-36 165-198 (300)
490 1ff9_A Saccharopine reductase; 88.8 0.3 1E-05 46.6 4.0 34 4-37 3-36 (450)
491 3b1f_A Putative prephenate deh 88.8 0.2 7E-06 44.6 2.7 33 5-37 7-41 (290)
492 2d5c_A AROE, shikimate 5-dehyd 88.8 0.24 8.4E-06 43.4 3.2 32 6-37 118-149 (263)
493 3dgh_A TRXR-1, thioredoxin red 88.8 0.47 1.6E-05 45.7 5.5 43 3-45 8-59 (483)
494 4gx0_A TRKA domain protein; me 88.7 0.24 8.1E-06 48.9 3.4 35 5-39 349-383 (565)
495 1lqt_A FPRA; NADP+ derivative, 88.7 0.27 9.1E-06 47.1 3.6 35 5-39 148-203 (456)
496 3u62_A Shikimate dehydrogenase 88.7 0.26 8.9E-06 43.0 3.2 32 6-37 110-142 (253)
497 3ngx_A Bifunctional protein fo 88.7 0.35 1.2E-05 42.4 3.9 33 4-36 150-183 (276)
498 3fi9_A Malate dehydrogenase; s 88.7 0.28 9.5E-06 44.8 3.5 35 3-37 7-44 (343)
499 3dqp_A Oxidoreductase YLBE; al 88.7 0.29 1E-05 41.3 3.5 32 6-37 2-34 (219)
500 1mld_A Malate dehydrogenase; o 88.6 0.31 1.1E-05 44.0 3.8 32 6-37 2-36 (314)
No 1
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.7e-57 Score=435.39 Aligned_cols=416 Identities=49% Similarity=0.866 Sum_probs=360.3
Q ss_pred CCCcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccccchHHHHHhhcCCCCCCCCCCCCcceEEccCccee
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFI 80 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~gp~~~ 80 (419)
|++++||||||+|++|+++|+.|+++|++|+|+||++++||++++++.++++.+|......+..+|.+++|++|++|+++
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s~~~~~l~~~~~~g~~~~~~~g~~R~y~iDL~P~~l 96 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETASLNLTNLYNTFKPKENIPSKYGENRHWNVDLIPKFI 96 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCTTSCCCGGGCCGGGCCEESSCCBE
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccccchhhhhhhcccCCCcccccccccceEEeecCeEe
Confidence 66789999999999999999999999999999999999999999999998889998765566778899999999999999
Q ss_pred ecCchhhHHHHhcCCcceeeEEEecceeEEe---------CCeEEEecCChhhhhccCCCChHhHHHHHHHHHHHhhccc
Q 014768 81 IANGALVRVLIHTDVTKYLYFKAVDGSFVYN---------KGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDE 151 (419)
Q Consensus 81 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (419)
+..+.++++|.++++.+|++|..+++.|.+. +|+.+++|.+..+.+...++++.+|+.+++|+.++..+.+
T Consensus 97 ~~~g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~~~VPss~~e~~~~~lLs~~eK~~l~kFL~~l~~~~~ 176 (475)
T 3p1w_A 97 LVGGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIHKVPATDMEALVSPLLSLMEKNRCKNFYQYVSEWDA 176 (475)
T ss_dssp ETTSHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEEEECCCSHHHHHTCTTSCHHHHHHHHHHHHHHHHCCT
T ss_pred ecCcHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCceEeCCCCHHHHhhccCCCHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999999999999998764 5778999988899999999999999999999999988765
Q ss_pred CCCCccccccCCcccHHHHHHHcCCChhHHHHHHHHHhhccCCCCCCCcHHHHHHHHHHHHHHhhhccCCCeEEEecCCc
Q 014768 152 NDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGL 231 (419)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~gG~ 231 (419)
..+..++.+++...++.+|++++++++.+++++...++++..+++...++..++.++..|+.++..| |.+++.||+||+
T Consensus 177 ~~~~~~~~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~~~~~~~~~~a~~~l~ri~~y~~Sl~~y-g~s~~~yp~gG~ 255 (475)
T 3p1w_A 177 NKRNTWDNLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALYLNDDYLKQPAYLTLERIKLYMQSISAF-GKSPFIYPLYGL 255 (475)
T ss_dssp TCGGGSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBHHHHHHHHHHHHHHHHHH-SSCSEEEETTCT
T ss_pred ccchhhhcccccCCCHHHHHHHcCCCHHHHHHHHHHHHhhcCCCcccCCHHHHHHHHHHHHHHHhhc-CCCceEEECCCH
Confidence 4444444445567899999999999999999887777777665565667788888889999888999 888999999999
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCC---CccccccCeeEEEEEEecC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYL---PNKVRKVGRVARAIAIMSH 307 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~---~~~~~~~~~~~~~~~~~~~ 307 (419)
+.|+++|++.++++|++|+++++|++|..++++++++|++ +|++++||+||++++++ |..+.....+.|.++++++
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~~~~p~~~~~~~~v~R~i~I~~~ 335 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYVMHLKNKIKKIGQVIRCICILSN 335 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGCTTSTTSEEEEEEEEEEEEEESS
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCccccCcccccccceEEEEEEEEec
Confidence 9999999999999999999999999999844789999998 77899999999999998 7654434568899999999
Q ss_pred CCCCCCCCCeEEEEecCCcCCCCCcEEEEEeCCCccccCCCcEEEEEEeeccCCCccccchhHHhhcccccceeeeeccc
Q 014768 308 PIPNTNDSHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLLGPVDEIFYDIYDR 387 (419)
Q Consensus 308 ~l~~~~~~~~~~i~~~~~~~~~~~~~~v~~~s~~~~~aP~G~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 387 (419)
|+.+.++..+.++++|+.++++.+.+|+++.|.....||+|+++++++|.+++++++++|+++++...++.+.+..+-+.
T Consensus 336 pi~~~~~~~~~~i~~P~~~~~~~~~iy~~~~s~~~~~cp~G~~i~~~st~~e~~~~~~~l~~~l~~l~~~~~~~~~~~~~ 415 (475)
T 3p1w_A 336 PIPETNQTNSCQIIIPQNQLNRKSDIYINLVSFQHGVTLKGKYIAIVSATVETNNPIKEIEKPLELLGTIEEKFVKISDL 415 (475)
T ss_dssp CCTTSTTCSSEEEEECGGGGTSSSCEEEEEEEGGGTSSCTTCEEEEEEEECCSSCHHHHTHHHHHTTCSEEEEEEEEEEE
T ss_pred cCcccCCCceEEEEeCCcccCCCCCEEEEEECCCcCcCCCCcEEEEEEeecCCCCHHHHHHHHHHHhcchhheeccchhe
Confidence 99776655677888999888878889999999888999999999999999888899999999998776777777755565
Q ss_pred cccCCCCCCCcEEEecCCCCCCchHHHhhh
Q 014768 388 YEPVNEPSLDNCFISTVTMMPQHTLSQLSR 417 (419)
Q Consensus 388 ~~~~~~~~~~~i~~~~~~tp~~d~~~~~~~ 417 (419)
++-.-.+..++|.....++++.|||+....
T Consensus 416 ~~~~~~~~~~~~~~~~~~d~~~~~e~~~~~ 445 (475)
T 3p1w_A 416 YVSTSKKPADNIFVTSSYDATSHFETATND 445 (475)
T ss_dssp EEESCSSCTTCEEECCCCCSCSBSHHHHHH
T ss_pred eeecccCCCCCEEEeCCCCCccchHHHHHH
Confidence 554335778999999999999999987653
No 2
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=100.00 E-value=1e-46 Score=367.47 Aligned_cols=414 Identities=52% Similarity=0.928 Sum_probs=320.2
Q ss_pred CCCcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccccchHHHHHhhcCCCC----CCCCCCCCcceEEccC
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQ----PPAHLGSSRDYNVDMI 76 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~----~~~~~g~~~~~~~d~g 76 (419)
|+.++||||||||++||+||++|+++|++|+|+||++++||++++++.++....|..... .+..++....|.+|++
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~g~~~~~d~~~~~~~~~~~~~~~g~~~~~~l~ 87 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAASVTLSQLYEKFKQNPISKEERESKFGKDRDWNVDLI 87 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHCSSCCCHHHHHHHHCCGGGCCEESS
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccceeccchhceeccCCccccCcchhcccccceeeccc
Confidence 446799999999999999999999999999999999999999999987652222221100 0000223357889999
Q ss_pred cceeecCchhhHHHHhcCCcceeeEEEecceeEEeCCeEEEecCChhhhhccCCCChHhHHHHHHHHHHHhhcccCCCCc
Q 014768 77 PKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKT 156 (419)
Q Consensus 77 p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (419)
|+++...+.+.+++.+.++.+++++..+++.|.+.+|+.+.+|.+..+.+...+.++++++.+++|+..+..+....|..
T Consensus 88 P~~l~~~~~l~~ll~~lg~~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~ 167 (453)
T 2bcg_G 88 PKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFKQGKIYKVPANEIEAISSPLMGIFEKRRMKKFLEWISSYKEDDLST 167 (453)
T ss_dssp CCBEETTSHHHHHHHHHTGGGTCCEEECCCEEEEETTEEEECCSSHHHHHHCTTSCHHHHHHHHHHHHHHHHCBTTBGGG
T ss_pred cceeecCcHHHHHHHhcCCccceEEEEccceeEEeCCeEEECCCChHHHHhhhccchhhHHHHHHHHHHHHHhccCCchh
Confidence 99999999899999999999899999998888888999999997658888888888888888889988887765332222
Q ss_pred cccccCCcccHHHHHHHcCCChhHHHHHHHHHhhccCCCCCCCcHHHHHHHHHHHHHHhhhccCCCeEEEecCCcCcHHH
Q 014768 157 HEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQ 236 (419)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~gG~~~l~~ 236 (419)
+..++....++.+++++++.++.+++++...+.+...+.+...|....+.++..++.++..+ +..++.+|+||++++++
T Consensus 168 ~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~l~~~~~~~~~p~~~~~~~~~~~~~s~~~~-~~~~~~~p~gG~~~l~~ 246 (453)
T 2bcg_G 168 HQGLDLDKNTMDEVYYKFGLGNSTKEFIGHAMALWTNDDYLQQPARPSFERILLYCQSVARY-GKSPYLYPMYGLGELPQ 246 (453)
T ss_dssp STTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBHHHHHHHHHHHHHHHHHH-SSCSEEEETTCTTHHHH
T ss_pred hhccccccCCHHHHHHHhCCCHHHHHHHHHHHHhccCccccCCchHHHHHHHHHHHHHHHhh-cCCceEeeCCCHHHHHH
Confidence 22223457899999999999999988876555544344454456666665666666666666 55678899999999999
Q ss_pred HHHHHHHHcCcEEEcCCccceEEEcC--CCcEEEEEeCCeEEEcCEEEeCCCCCCccccccC-eeEEEEEEecCCCCCCC
Q 014768 237 AFARLSAVYGGTYMLNKPECKVEFDE--EGKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVG-RVARAIAIMSHPIPNTN 313 (419)
Q Consensus 237 al~~~~~~~G~~i~~~~~V~~I~~~~--~~~v~gV~~~g~~i~ad~VV~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~ 313 (419)
+|++.++++|++|+++++|++|.. + ++++++|+++|+++.||+||+++++++..+.... ...+.+.+++++++..+
T Consensus 247 al~~~~~~~G~~i~~~~~V~~i~~-~~~~~~~~~V~~~g~~~~ad~VV~a~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~ 325 (453)
T 2bcg_G 247 GFARLSAIYGGTYMLDTPIDEVLY-KKDTGKFEGVKTKLGTFKAPLVIADPTYFPEKCKSTGQRVIRAICILNHPVPNTS 325 (453)
T ss_dssp HHHHHHHHTTCEEECSCCCCEEEE-ETTTTEEEEEEETTEEEECSCEEECGGGCGGGEEEEEEEEEEEEEEESSCCTTST
T ss_pred HHHHHHHHcCCEEECCCEEEEEEE-ECCCCeEEEEEECCeEEECCEEEECCCccchhhcccCCcceeEEEEEccccCCCC
Confidence 999999999999999999999998 5 7888899889999999999999998875543333 35566667777776443
Q ss_pred CCCeEEEEecCCcCCCCCcEEEEEeCCCccccCCCcEEEEEEeeccCCCccccchhHHhhcccccceeeeeccccccCCC
Q 014768 314 DSHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLLGPVDEIFYDIYDRYEPVNE 393 (419)
Q Consensus 314 ~~~~~~i~~~~~~~~~~~~~~v~~~s~~~~~aP~G~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (419)
...+++++++.+++++++++|++++|...++||+|++++++++++++.+++++|++.++......+.+..+.+..+....
T Consensus 326 ~~~~~~ii~~~~~~~~~~~~~v~~~s~~d~~aP~G~~~~~v~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~ 405 (453)
T 2bcg_G 326 NADSLQIIIPQSQLGRKSDIYVAIVSDAHNVCSKGHYLAIISTIIETDKPHIELEPAFKLLGPIEEKFMGIAELFEPRED 405 (453)
T ss_dssp TCSSEEEEECGGGTTCSSCEEEEEEEGGGTSSCTTCEEEEEEEECCSSCHHHHTHHHHGGGCSCSEEEEEEEEEEEESSC
T ss_pred CCccEEEEeCccccCCCCCEEEEEeCCCCCCCCCCcEEEEEEEecCCCCHHHHHHHHHHHhhhHHHhhccchheeeecCC
Confidence 33455667887788888999999999767889999999999999988888888888777655444445545555554334
Q ss_pred CCCCcEEEecCCCCCCchHHHhh
Q 014768 394 PSLDNCFISTVTMMPQHTLSQLS 416 (419)
Q Consensus 394 ~~~~~i~~~~~~tp~~d~~~~~~ 416 (419)
...++|.....++.+.+|+....
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~ 428 (453)
T 2bcg_G 406 GSKDNIYLSRSYDASSHFESMTD 428 (453)
T ss_dssp STTTSEEECCCCCSCSBSHHHHH
T ss_pred CCCCCEEECCCCCccccHHHHHH
Confidence 56789999888888888887654
No 3
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=100.00 E-value=2.3e-46 Score=362.71 Aligned_cols=414 Identities=59% Similarity=1.017 Sum_probs=319.1
Q ss_pred CCCcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccccc-hHHHHHhhcCCCCCCCCCCCCcceEEccCcce
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKF 79 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~-~~~~~~~~~~~~~~~~~~g~~~~~~~d~gp~~ 79 (419)
|+.++||+|||||++||++|++|+++|++|+|+|+++.+||++++++ ..+..+.|.........++...+|.+|+||++
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s~~~~~~g~~~~~~~~~~~~~~~~g~~~~~d~gP~~ 82 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKF 82 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCEECSHHHHHHHTTCTTCCCGGGCCGGGCCEESSCCB
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccccccHHHHHhhccCCCCChhHhcccCceEEccCcce
Confidence 77789999999999999999999999999999999999999999998 43222122211112233455568999999999
Q ss_pred eecCchhhHHHHhcCCcceeeEEEecceeEEeCCeEEEecCChhhhhccCCCChHhHHHHHHHHHHHhhcccCCCCcccc
Q 014768 80 IIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEG 159 (419)
Q Consensus 80 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (419)
+...+.+.+++.+.++.+++++...++.|.+.+|+.+.+|.+..+.+...+.++++++.+++|+..+..+....+...+.
T Consensus 83 l~~~~~l~~ll~~lgl~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 162 (433)
T 1d5t_A 83 LMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEG 162 (433)
T ss_dssp EETTSHHHHHHHHHTGGGGCCEEECCEEEEEETTEEEECCCSHHHHHHCSSSCHHHHHHHHHHHHHHHHCCTTCGGGGTT
T ss_pred eeccchHHHHHHHcCCccceEEEEeCceEEeeCCEEEECCCCHHHHhhCcccChhhHHHHHHHHHHHHhhcccCchhccc
Confidence 99988888888889999999999988888888999999997655788888888888888889988887765333322222
Q ss_pred ccCCcccHHHHHHHcCCChhHHHHHHHHHhhccCCCCCCCcHHHHHHHHHHHHHHhhhccCCCeEEEecCCcCcHHHHHH
Q 014768 160 MDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFA 239 (419)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~gG~~~l~~al~ 239 (419)
.+....++.+++++++.++.+++++...+.++....+...|....+..+..+..++..+ |..++++|+||++.++++|+
T Consensus 163 ~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~-g~~~~~~p~gG~~~l~~~l~ 241 (433)
T 1d5t_A 163 VDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFA 241 (433)
T ss_dssp CCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBSHHHHHHHHHHHHSCCSS-SCCSEEEETTCTTHHHHHHH
T ss_pred cccccCCHHHHHHHcCCCHHHHHHHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHhc-CCCcEEEeCcCHHHHHHHHH
Confidence 23467899999999999999988876655555444444556555555555555555555 56678999999999999999
Q ss_pred HHHHHcCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCCCccccccCeeEEEEEEecCCCCCCCCCCeEE
Q 014768 240 RLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTNDSHSVQ 319 (419)
Q Consensus 240 ~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~~g~~i~ad~VV~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 319 (419)
+.++++|++|+++++|++|.. +++++++|+++|+++.||+||+++++++..+.......+.+.+++++++..+....+.
T Consensus 242 ~~~~~~G~~i~~~~~V~~I~~-~~~~v~~v~~~g~~~~ad~VV~a~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~ 320 (433)
T 1d5t_A 242 RLSAIYGGTYMLNKPVDDIIM-ENGKVVGVKSEGEVARCKQLICDPSYVPDRVRKAGQVIRIICILSHPIKNTNDANSCQ 320 (433)
T ss_dssp HHHHHHTCCCBCSCCCCEEEE-ETTEEEEEEETTEEEECSEEEECGGGCGGGEEEEEEEEEEEEEESSCCTTSTTCSSEE
T ss_pred HHHHHcCCEEECCCEEEEEEE-eCCEEEEEEECCeEEECCEEEECCCCCcccccccCcceeEEEEEcCcccccCCCceEE
Confidence 999999999999999999998 4888988888999999999999998876544322234455666677776443334567
Q ss_pred EEecCCcCCCCCcEEEEEeCCCccccCCCcEEEEEEeeccCCCccccchhHHhhcccccceeeeeccccccCCCCCCCcE
Q 014768 320 VILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLLGPVDEIFYDIYDRYEPVNEPSLDNC 399 (419)
Q Consensus 320 i~~~~~~~~~~~~~~v~~~s~~~~~aP~G~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 399 (419)
++++.+++++++.+|++++|..+++||+|++++++++++++.++.++|++.++......+.+..+.+.++..-.+..++|
T Consensus 321 i~~~~~~~~~~~~~~v~~~s~d~~~aP~G~~~~~~~~~~p~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (433)
T 1d5t_A 321 IIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIASTTVETTDPEKEVEPALGLLEPIDQKFVAISDLYEPIDDGSESQV 400 (433)
T ss_dssp EEECGGGTTCSSCEEEEEEEGGGTSSCTTCEEEEEEEECCSSCHHHHTHHHHTTTCSCSEEEEEEEEEEEESCCSTTTCE
T ss_pred EEeCccccCCCCCEEEEEECCCCcccCCCCEEEEEEEecCCCCHHHHHHHHHHHhhhHHhheeccceeeeecCCCCCCCE
Confidence 77888888888999999999339999999999999999988888888888877655444455544444544334566899
Q ss_pred EEecCCCCCCchHHHhh
Q 014768 400 FISTVTMMPQHTLSQLS 416 (419)
Q Consensus 400 ~~~~~~tp~~d~~~~~~ 416 (419)
.....++.+.+|+....
T Consensus 401 ~~~~~~d~~~~~e~~~~ 417 (433)
T 1d5t_A 401 FCSCSYDATTHFETTCN 417 (433)
T ss_dssp EECCCCCSCSBSHHHHH
T ss_pred EECCCCCccccHHHHHH
Confidence 99999999888887654
No 4
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=100.00 E-value=2.4e-45 Score=362.42 Aligned_cols=406 Identities=25% Similarity=0.484 Sum_probs=320.6
Q ss_pred CCCcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccccchHHHHHhhcCCC---------------------
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNE--------------------- 59 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~--------------------- 59 (419)
|+.+|||+|||+|+.|.+.|+.|++.|++|+++||++++||.+.++++.++.+|.....
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~~~l~~l~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASFSFSGLLSWLKEYQENNDVVTENSMWQEQILENEE 84 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEECHHHHHHHHHHTC----------CGGGGCCTTEE
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccccccHHHHHHHHHHhhccccccccccchhhhhhcchh
Confidence 34579999999999999999999999999999999999999999999999888532100
Q ss_pred -------------------------------------------C---------------------------C--------
Q 014768 60 -------------------------------------------Q---------------------------P-------- 61 (419)
Q Consensus 60 -------------------------------------------~---------------------------~-------- 61 (419)
. .
T Consensus 85 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (650)
T 1vg0_A 85 AIPLSSKDKTIQHVEVFCYASQDLHKDVEEAGALQKNHASVTSAQSAEAAEAAETSCLPTAVEPLSMGSCEIPAEQSQCP 164 (650)
T ss_dssp EEEBCSSCCCEEEEEEEECSCC----------------------------------------------------------
T ss_pred hccccccccccccceeEeecccccccchhhcccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 0 0
Q ss_pred ------------------------------------------CCC--------CCCCcceEEccCcceeecCchhhHHHH
Q 014768 62 ------------------------------------------PAH--------LGSSRDYNVDMIPKFIIANGALVRVLI 91 (419)
Q Consensus 62 ------------------------------------------~~~--------~g~~~~~~~d~gp~~~~~~~~~~~~l~ 91 (419)
+.. ++.+++|+||++|+++++++.++++|.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~i~~~~R~f~~DL~PklL~~~g~lv~LL~ 244 (650)
T 1vg0_A 165 GPESSPEVNDAEATGKKENSDAKSSTEEPSENVPKVQDNTETPKKNRITYSQIIKEGRRFNIDLVSKLLYSRGLLIDLLI 244 (650)
T ss_dssp ----------------------------------------------CCCHHHHHHTGGGCCEESSCCCEESSSHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccchhhhcccCCCeEEeeCCeeeeCCcHHHHHHH
Confidence 000 235789999999999999999999999
Q ss_pred hcCCcceeeEEEecceeEEeCCeEEEecCChhhhhccCCCChHhHHHHHHHHHHHhhcccCCCCccccccCCcccHHHHH
Q 014768 92 HTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELI 171 (419)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (419)
++++.+|++|+.++..|++.+|+..++|.+..+.|....+++.+|+.+++|+.++..+.. .+..++ .+...++.+|+
T Consensus 245 ~sgV~~yLEFk~v~~~y~~~~G~~~~VPas~~eif~s~~Lsl~EKr~L~kFl~~~~~~~~-~p~~~~--~~d~~S~~d~L 321 (650)
T 1vg0_A 245 KSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEE-HPDEYR--AYEGTTFSEYL 321 (650)
T ss_dssp HHTGGGGCCEEECCEEEEESSSSEEECCCSHHHHHHCSSSCHHHHHHHHHHHHHHHTGGG-CHHHHH--TTTTSBHHHHH
T ss_pred HcCCcceeeEEEccceEEecCCCEeECCCCHHHHHhCcCCCHHHHHHHHHHHHHHHHhcc-ChHHHh--hhccCCHHHHH
Confidence 999999999999999999999999999999899999999999999999999999887543 221112 34678999999
Q ss_pred HHcCCChhHHHHHHHHHhhccCCCCCCCcHHHHHHHHHHHHHHhhhccCCCeEEEecCCcCcHHHHHHHHHHHcCcEEEc
Q 014768 172 AKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYML 251 (419)
Q Consensus 172 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~gG~~~l~~al~~~~~~~G~~i~~ 251 (419)
+++++++.+++++...+++.... ..+....+.++..|+.+++.| |.++++||+||+++|+++|++.++++||+|++
T Consensus 322 ~~~~ls~~L~~~L~~~lal~~~~---~~pa~~~l~~i~~~l~sl~~y-g~sg~~yp~GG~g~L~qaL~r~~~~~Gg~i~l 397 (650)
T 1vg0_A 322 KTQKLTPNLQYFVLHSIAMTSET---TSCTVDGLKATKKFLQCLGRY-GNTPFLFPLYGQGELPQCFCRMCAVFGGIYCL 397 (650)
T ss_dssp TTSSSCHHHHHHHHHHTTC--CC---SCBHHHHHHHHHHHHHHTTSS-SSSSEEEETTCTTHHHHHHHHHHHHTTCEEES
T ss_pred HHhCCCHHHHHHHHHHHhccCCC---CCchhHHHHHHHHHHHHHHhh-ccCceEEeCCchhHHHHHHHHHHHHcCCEEEe
Confidence 99999999998887666554322 235566666677787777878 66799999999999999999999999999999
Q ss_pred CCccceEEEcCC--CcEEEEEe-CCeEEEcCEEEeCCCCCCccccc---cCeeEEEEEEecCCCCCCCCC-CeEEEEecC
Q 014768 252 NKPECKVEFDEE--GKVVGVTS-EGETAKCKKVVCDPSYLPNKVRK---VGRVARAIAIMSHPIPNTNDS-HSVQVILPQ 324 (419)
Q Consensus 252 ~~~V~~I~~~~~--~~v~gV~~-~g~~i~ad~VV~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~-~~~~i~~~~ 324 (419)
+++|++|.++ + |++++|++ +|++++||+||+++.++|..... ++.+.|.++++++++.+.... ....+++|+
T Consensus 398 ~~~V~~I~~~-~~~g~v~gV~~~~Ge~i~A~~VVs~~~~lp~~~~~~~~~~~v~R~i~i~~~pi~~~~~~~~~~~iiiP~ 476 (650)
T 1vg0_A 398 RHSVQCLVVD-KESRKCKAVIDQFGQRIISKHFIIEDSYLSENTCSRVQYRQISRAVLITDGSVLRTDADQQVSILTVPA 476 (650)
T ss_dssp SCCEEEEEEE-TTTCCEEEEEETTSCEEECSEEEEEGGGBCTTTTTTCCCEEEEEEEEEESSCSSCCSCCCCCEEEEECC
T ss_pred CCEeeEEEEe-CCCCeEEEEEeCCCCEEEcCEEEEChhhcCHhHhccccccceEEEEEEecCCCCCcCCCcceEEEEccC
Confidence 9999999985 6 89999986 79999999999988887754322 346788899999987654322 344556776
Q ss_pred CcCCCCCcEEEEEeCCCccccCCCcEEEEEEeeccCCCccccchhHHhhc-ccccce----------------eeeeccc
Q 014768 325 KQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLL-GPVDEI----------------FYDIYDR 387 (419)
Q Consensus 325 ~~~~~~~~~~v~~~s~~~~~aP~G~~~l~~~~~~~~~~~~~~l~~~~~~~-~~~~~~----------------~~~~~~~ 387 (419)
.+ +.++.+|+.++|..+++||+|++++++++. ...++..+|++.++.+ ....+. |..+.+.
T Consensus 477 ~~-g~~~~V~i~~~Ss~~~~cP~G~~Vv~lst~-~~~~~~~eLe~~l~~L~~~~~~~~~~~~~~~~~~vLws~~~~~~~~ 554 (650)
T 1vg0_A 477 EE-PGSFAVRVIELCSSTMTCMKGTYLVHLTCM-SSKTAREDLERVVQKLFTPYTEIEAENEQVEKPRLLWALYFNMRDS 554 (650)
T ss_dssp SS-TTSCCEEEEEECGGGTSSCTTCEEEEEEEE-CSSCHHHHHHHHHHHHCBSCSCCC-------CCBEEEEEEEEEEEC
T ss_pred cc-CCCCCEEEEEeCCCCCCCCCCCEEEEEEee-cCCCHHHHHHHHHHHHhccccccccccccccCCceEEEEEEEeecc
Confidence 65 467899999999888999999999999876 4457777888877743 322111 2222333
Q ss_pred c---ccCCCCCCCcEEEecCCCCCCchHHHhh
Q 014768 388 Y---EPVNEPSLDNCFISTVTMMPQHTLSQLS 416 (419)
Q Consensus 388 ~---~~~~~~~~~~i~~~~~~tp~~d~~~~~~ 416 (419)
. +....+..++|.+...++.+.+|+....
T Consensus 555 ~~~~~~~~~~~~~ni~~~~~~d~~~~fe~~v~ 586 (650)
T 1vg0_A 555 SDISRDCYNDLPSNVYVCSGPDSGLGNDNAVK 586 (650)
T ss_dssp TTCCGGGSSSCCTTEEEECCCCSSSSSHHHHH
T ss_pred cccccccccCCCCCEEEeCCCCCccCHHHHHH
Confidence 2 2122567889999999999899987543
No 5
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=100.00 E-value=2.6e-41 Score=334.60 Aligned_cols=369 Identities=16% Similarity=0.167 Sum_probs=230.7
Q ss_pred eEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccccchHHHHHhhcCCCCCCCCCCCCcceEEccCcceeecCch
Q 014768 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGA 85 (419)
Q Consensus 6 dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~gp~~~~~~~~ 85 (419)
+|||||||++||+||++|+++|++|+||||++++||+++|++.+ +|.||.|++++..+..
T Consensus 3 ~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~t~~~~--------------------G~~~D~G~~~~~~~~~ 62 (501)
T 4dgk_A 3 PTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAYVYEDQ--------------------GFTFDAGPTVITDPSA 62 (501)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------CEEEET--------------------TEEEECSCCCBSCTHH
T ss_pred CEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEEEEEeC--------------------CEEEecCceeecCchh
Confidence 79999999999999999999999999999999999999998753 7999999999987754
Q ss_pred hhHHHHhc--CCcceeeEEEecceeE--EeCCeEEEecCChhhhhccCCCChH--hHHHHHHHHHHHhhcccCCCCcc--
Q 014768 86 LVRVLIHT--DVTKYLYFKAVDGSFV--YNKGKVHKVPATDMEALKSPLMGIF--EKRRARKFFIYVQDYDENDPKTH-- 157 (419)
Q Consensus 86 ~~~~l~~~--~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-- 157 (419)
+.+++... .+.+++++.+.++.+. +.+|..+.++.+ .+.+...+.+++ +...+.+|+..++..........
T Consensus 63 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (501)
T 4dgk_A 63 IEELFALAGKQLKEYVELLPVTPFYRLCWESGKVFNYDND-QTRLEAQIQQFNPRDVEGYRQFLDYSRAVFKEGYLKLGT 141 (501)
T ss_dssp HHHHHHTTTCCGGGTCCEEEESSSEEEEETTSCEEEECSC-HHHHHHHHHHHCTHHHHHHHHHHHHHHHHTSSSCC--CC
T ss_pred HHHHHHHhcchhhhceeeEecCcceEEEcCCCCEEEeecc-HHHHHHHHhhcCccccchhhhHHHHHHHhhhhhhhhccc
Confidence 44444433 4567788988888764 568888888754 555554433321 22344555555544321100000
Q ss_pred ccc-----------cC----CcccHHHHHHHcCCChhHHHHHHHHHhhccCCCCCCCcHHHHHHHHHHHHHHhhhccCCC
Q 014768 158 EGM-----------DL----TRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGS 222 (419)
Q Consensus 158 ~~~-----------~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 222 (419)
..+ .+ ...++.+++.++..++.++.++.......... ....+.... ++... . ...
T Consensus 142 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g~~-p~~~~~~~~------~~~~~-~--~~~ 211 (501)
T 4dgk_A 142 VPFLSFRDMLRAAPQLAKLQAWRSVYSKVASYIEDEHLRQAFSFHSLLVGGN-PFATSSIYT------LIHAL-E--REW 211 (501)
T ss_dssp CCCCCHHHHHHSGGGTTTSHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHSC-C--CCCTHH------HHHHH-H--SCC
T ss_pred cccchhhhhhhhhhhhhhhhhcccHHHHHHHHhccHHHHhhhhhhhcccCCC-cchhhhhhh------hhhhh-h--ccC
Confidence 000 00 01233445555544555555443211111111 111111110 00001 1 234
Q ss_pred eEEEecCCcCcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCCc---cccc----
Q 014768 223 PYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN---KVRK---- 294 (419)
Q Consensus 223 ~~~~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~~~---~~~~---- 294 (419)
+.++|+||+++|+++|++.++++|++|++|++|++|+. +++++++|++ +|+++.||+||+|+++... .+..
T Consensus 212 G~~~p~GG~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~-~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~~ 290 (501)
T 4dgk_A 212 GVWFPRGGTGALVQGMIKLFQDLGGEVVLNARVSHMET-TGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPAA 290 (501)
T ss_dssp CEEEETTHHHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTSCEEECSCEEECCC---------------
T ss_pred CeEEeCCCCcchHHHHHHHHHHhCCceeeecceeEEEe-eCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccccccc
Confidence 56799999999999999999999999999999999999 5999999999 8999999999999876421 1100
Q ss_pred -----------cC-eeEEEEEEecCCCCCCCCCCeEEE------------EecCCcCCCCCcEEEEEeCCC-ccccCCCc
Q 014768 295 -----------VG-RVARAIAIMSHPIPNTNDSHSVQV------------ILPQKQLGRRSDMYLFCCSYS-HNVAPKGK 349 (419)
Q Consensus 295 -----------~~-~~~~~~~~~~~~l~~~~~~~~~~i------------~~~~~~~~~~~~~~v~~~s~~-~~~aP~G~ 349 (419)
.+ .....+..++.+.... ....+ ++..+.+++++.+|++++|.. |++||+|+
T Consensus 291 ~~~~~~~~~~~~~~s~~~~~~~l~~~~~~l---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~~ap~G~ 367 (501)
T 4dgk_A 291 VKQSNKLQTKRMSNSLFVLYFGLNHHHDQL---AHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLAPEGC 367 (501)
T ss_dssp ------------CCEEEEEEEEESSCCTTS---CSEEEEEECC-------------CCCEEEEEEECGGGTCGGGSSTTC
T ss_pred hhhhhhhhccccCCceeEEEecccCCcccc---ccceeccccchhhhccccccccccccCCceecccCCCCCCCcCCCCC
Confidence 00 0111122233322111 01111 133445677789999999988 99999999
Q ss_pred EEEEEEeeccCCCccccchhHHhhcccccceee-eeccccccC-CCCCCCcEEEecCCCCCCchHHHhh
Q 014768 350 FIAFVSTEAETDHPQTELKPGIDLLGPVDEIFY-DIYDRYEPV-NEPSLDNCFISTVTMMPQHTLSQLS 416 (419)
Q Consensus 350 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~i~~~~~~tp~~d~~~~~~ 416 (419)
++++++++++.... .-.+|++.++++. ++++.++++ .|+++++|++.++.|| .||++.++
T Consensus 368 ~~~~~~~~~p~~~~------~~~~~~~~~~~~~~~vl~~l~~~~~P~~~~~i~~~~~~tP-~~~~~~~~ 429 (501)
T 4dgk_A 368 GSYYVLAPVPHLGT------ANLDWTVEGPKLRDRIFAYLEQHYMPGLRSQLVTHRMFTP-FDFRDQLN 429 (501)
T ss_dssp EEEEEEEEECCTTT------SCCCHHHHHHHHHHHHHHHHHHHTCTTHHHHEEEEEEECT-TTTC----
T ss_pred ceEEEEEecCcccc------ccccHHHHHHHHHHHHHHHHHHhhCCChHHceEEEEECCH-HHHHHHcC
Confidence 99999988764211 0125877788888 999999874 5999999999999999 99998765
No 6
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.95 E-value=1.3e-26 Score=224.36 Aligned_cols=299 Identities=16% Similarity=0.189 Sum_probs=184.1
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccccchHHHHHhhcCCCCCCCCCCCCcceEEccCcceeecC-
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIAN- 83 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~gp~~~~~~- 83 (419)
+||||||||++||+||++|+++|++|+||||++.+||+++++..+ ++.+|.||+.+...
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~--------------------G~~~d~G~~~~~~~~ 60 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFTNLSYK--------------------GFQLSSGAFHMLPNG 60 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSSEEEET--------------------TEEEESSSCSCBTTG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCceeeeccC--------------------CcEEcCCCceEecCC
Confidence 489999999999999999999999999999999999999988643 79999998766532
Q ss_pred --chhhHHHHhcCCcceeeEEEeccee-EEe--C--------CeEEEecCChhhhhccCCCChHhHHHHHHHHHHHhhcc
Q 014768 84 --GALVRVLIHTDVTKYLYFKAVDGSF-VYN--K--------GKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYD 150 (419)
Q Consensus 84 --~~~~~~l~~~~~~~~~~~~~~~~~~-~~~--~--------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (419)
..+.+++.+.++... +...+..+ .+. + +..+.++. +. ...+..++. ++...+....
T Consensus 61 ~~~~~~~l~~~lg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~---~~~~~~~~~~ 129 (425)
T 3ka7_A 61 PGGPLACFLKEVEASVN--IVRSEMTTVRVPLKKGNPDYVKGFKDISFND-----FP-SLLSYKDRM---KIALLIVSTR 129 (425)
T ss_dssp GGSHHHHHHHHTTCCCC--EEECCCCEEEEESSTTCCSSTTCEEEEEGGG-----GG-GGSCHHHHH---HHHHHHHHTT
T ss_pred CccHHHHHHHHhCCCce--EEecCCceEEeecCCCcccccccccceehhh-----hh-hhCCHHHHH---HHHHHHHhhh
Confidence 235555555666533 22222222 221 1 33333321 11 122222322 2222222211
Q ss_pred cCCCCccccccCCcccHHHHHHHcCCChhHHHHHHHHHhhccCCCCCCCcHHHHHHHHHHHHHHhhhccCCCeEEEecCC
Q 014768 151 ENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYG 230 (419)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~gG 230 (419)
.. .....++.+|+++..-++.+..++..........+....+....+..+..+ ..+ + +..+|+||
T Consensus 130 ~~--------~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~----~~~-~--~~~~~~gG 194 (425)
T 3ka7_A 130 KN--------RPSGSSLQAWIKSQVSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENM----YRF-G--GTGIPEGG 194 (425)
T ss_dssp TS--------CCCSSBHHHHHHHHCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHH----HHH-C--SCEEETTS
T ss_pred hc--------CCCCCCHHHHHHHhcCCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHH----Hhc-C--CccccCCC
Confidence 00 124578999998875555555555443322222222222333333222221 122 2 24589999
Q ss_pred cCcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCC------Ccc--c--c-------
Q 014768 231 LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYL------PNK--V--R------- 293 (419)
Q Consensus 231 ~~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~~g~~i~ad~VV~~~~~~------~~~--~--~------- 293 (419)
++.++++|++.++++|++|++|++|++|..+ ++++++|+++|+++.||.||++++.+ +.. . +
T Consensus 195 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~~~gv~~~g~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~ 273 (425)
T 3ka7_A 195 CKGIIDALETVISANGGKIHTGQEVSKILIE-NGKAAGIIADDRIHDADLVISNLGHAATAVLCSEALSKEADAAYFKMV 273 (425)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTEEEECSEEEECSCHHHHHHHTTTTCCTTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCEEEECCceeEEEEE-CCEEEEEEECCEEEECCEEEECCCHHHHHHhcCCcccccCCHHHHHHh
Confidence 9999999999999999999999999999994 88898898899999999999988653 110 0 0
Q ss_pred ---ccCeeEEEEEEecCCCCCCCCCCeEEEEecCCcCCCCCcEEEEEeCCC-ccccCCCcEEEEEEeec
Q 014768 294 ---KVGRVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCCSYS-HNVAPKGKFIAFVSTEA 358 (419)
Q Consensus 294 ---~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~v~~~s~~-~~~aP~G~~~l~~~~~~ 358 (419)
..+........++.++.. .+ .++++... .+...+..+|.. |++||+|++++++....
T Consensus 274 ~~~~~~~~~~v~l~~~~~~~~----~~-~~~~~~~~---~~~~~~~~~s~~~p~~ap~G~~~l~~~~~~ 334 (425)
T 3ka7_A 274 GTLQPSAGIKICLAADEPLVG----HT-GVLLTPYT---RRINGVNEVTQADPELAPPGKHLTMCHQYV 334 (425)
T ss_dssp HHCCCBEEEEEEEEESSCSSC----SS-SEEECCSS---SSEEEEECGGGTCGGGSCTTCEEEEEEEEE
T ss_pred hCcCCCceEEEEeecCCCccC----cC-EEEECCCh---hhcceEEeccCCCCCcCCCCCeEEEEEecc
Confidence 011122222233443321 11 23344321 234567778887 99999999999876543
No 7
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.94 E-value=1.3e-25 Score=216.93 Aligned_cols=301 Identities=14% Similarity=0.141 Sum_probs=185.8
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccccchHHHHHhhcCCCCCCCCCCCCcceEEccCcceeecC-
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIAN- 83 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~gp~~~~~~- 83 (419)
+||||||||++||+||++|+++|++|+||||++.+||+++++..+ ++.+|.||+++...
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~~~~~--------------------g~~~d~G~~~~~~~~ 60 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTNLPYK--------------------GFQLSTGALHMIPHG 60 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSEEEET--------------------TEEEESSSCSEETTT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEEeccC--------------------CEEEecCCeEEEccC
Confidence 389999999999999999999999999999999999999998643 79999999776542
Q ss_pred --chhhHHHHhcCCcceeeEEEeccee-EEeCCeEEEecCChhhhhccCCCChHhHHHHHHHHHHHhhcccCCCCccccc
Q 014768 84 --GALVRVLIHTDVTKYLYFKAVDGSF-VYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGM 160 (419)
Q Consensus 84 --~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (419)
..+.+++.+.++. .++...++.. .+.+|..+.++.. ...+ +..++..+.++....... ..
T Consensus 61 ~~~~~~~l~~~lg~~--~~~~~~~~~~~~~~~g~~~~~~~~-~~~l-----~~~~~~~~~~~~~~~~~~---------~~ 123 (421)
T 3nrn_A 61 EDGPLAHLLRILGAK--VEIVNSNPKGKILWEGKIFHYRES-WKFL-----SVKEKAKALKLLAEIRMN---------KL 123 (421)
T ss_dssp TSSHHHHHHHHHTCC--CCEEECSSSCEEEETTEEEEGGGG-GGGC-----C--------CCHHHHHTT---------CC
T ss_pred CChHHHHHHHHhCCc--ceEEECCCCeEEEECCEEEEcCCc-hhhC-----CHhHHHHHHHHHHHHHhc---------cC
Confidence 2455555555654 3444444433 3447777776632 2111 111222222222222110 00
Q ss_pred cCCcccHHHHHHHcCCC-hhHHHHHHHHHhhccCCCCCCCcHHHHHHHHHHHHHHhhhccCCCeEEEecCCcCcHHHHHH
Q 014768 161 DLTRVTTRELIAKYGLD-DNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFA 239 (419)
Q Consensus 161 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~gG~~~l~~al~ 239 (419)
.....++.++++..+++ +.+..++.+........+....+....+..+..+ ..+ + +.++|+||++.++++|+
T Consensus 124 ~~~~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~--g~~~~~gG~~~l~~~l~ 196 (421)
T 3nrn_A 124 PKEEIPADEWIKEKIGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAA----LRW-G--GPGLIRGGCKAVIDELE 196 (421)
T ss_dssp CCCCSBHHHHHHHHTCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHH----HHH-C--SCEEETTCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHhcCCcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHH----hhc-C--CcceecCCHHHHHHHHH
Confidence 12347889999887444 4444545443332222222223333333332222 122 2 34699999999999999
Q ss_pred HHHHHcCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCC------C-cccc--------c--cCeeEEEE
Q 014768 240 RLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYL------P-NKVR--------K--VGRVARAI 302 (419)
Q Consensus 240 ~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~~g~~i~ad~VV~~~~~~------~-~~~~--------~--~~~~~~~~ 302 (419)
+.++++|++|++|++|++|.. +++++ |.++|+++.||.||++++.+ + ...+ . .+......
T Consensus 197 ~~~~~~G~~i~~~~~V~~i~~-~~~~v--V~~~g~~~~ad~Vv~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~ 273 (421)
T 3nrn_A 197 RIIMENKGKILTRKEVVEINI-EEKKV--YTRDNEEYSFDVAISNVGVRETVKLIGRDYFDRDYLKQVDSIEPSEGIKFN 273 (421)
T ss_dssp HHHHTTTCEEESSCCEEEEET-TTTEE--EETTCCEEECSEEEECSCHHHHHHHHCGGGSCHHHHHHHHTCCCCCEEEEE
T ss_pred HHHHHCCCEEEcCCeEEEEEE-ECCEE--EEeCCcEEEeCEEEECCCHHHHHHhcCcccCCHHHHHHHhCCCCCceEEEE
Confidence 999999999999999999998 47776 66688999999999988653 1 1010 0 11112222
Q ss_pred EEecCC-CCCCCCCCeEEEEecCCcCCCCCcEEEEEeCCC-ccccCCCcEEEEEEeeccCCC
Q 014768 303 AIMSHP-IPNTNDSHSVQVILPQKQLGRRSDMYLFCCSYS-HNVAPKGKFIAFVSTEAETDH 362 (419)
Q Consensus 303 ~~~~~~-l~~~~~~~~~~i~~~~~~~~~~~~~~v~~~s~~-~~~aP~G~~~l~~~~~~~~~~ 362 (419)
..++.+ +. ....+ +++.. . ...+..+|.. |++||+|++++++...++..+
T Consensus 274 l~~~~~~~~-----~~~~~-~~~~~---~-~~~i~~~s~~~p~~ap~G~~~~~~~~~~~~~~ 325 (421)
T 3nrn_A 274 LAVPGEPRI-----GNTIV-FTPGL---M-INGFNEPSALDKSLAREGYTLIMAHMALKNGN 325 (421)
T ss_dssp EEEESSCSS-----CSSEE-ECTTS---S-SCEEECGGGTCGGGSCTTEEEEEEEEECTTCC
T ss_pred EEEcCCccc-----CCeEE-EcCCc---c-eeeEeccCCCCCCcCCCCceEEEEEEeecccc
Confidence 233333 21 11233 43321 1 2346778877 999999999999988776543
No 8
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.89 E-value=4.6e-23 Score=203.39 Aligned_cols=254 Identities=19% Similarity=0.153 Sum_probs=157.9
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccccchHHHHHhhcCCCCCCCCCCCCcceEEccCcceeecC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIAN 83 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~gp~~~~~~ 83 (419)
++||+|||||++||+||++|+++|++|+|+|+++++||+++|.+.+ ++.+|+|++++...
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~--------------------g~~~d~G~~~~~~~ 98 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNID--------------------GYPYEMGGTWVHWH 98 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEET--------------------TEEEECSCCCBCTT
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccC--------------------CeeecCCCeEecCc
Confidence 3899999999999999999999999999999999999999998643 78999999998754
Q ss_pred -chhhHHHHhcCCcceeeEEE--e--cceeEEeC--CeEEEecCChhhhhccCCCChHhHHHHHHHHHHHh-hcccCCCC
Q 014768 84 -GALVRVLIHTDVTKYLYFKA--V--DGSFVYNK--GKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQ-DYDENDPK 155 (419)
Q Consensus 84 -~~~~~~l~~~~~~~~~~~~~--~--~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 155 (419)
..+.+++.+.++.+.+.... . ...+.+.+ |....++.. .... .+. ..+.+|..... ......+.
T Consensus 99 ~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~----~~~-~~~~~~~~~~~~~~~~~~~~ 170 (495)
T 2vvm_A 99 QSHVWREITRYKMHNALSPSFNFSRGVNHFQLRTNPTTSTYMTHE---AEDE----LLR-SALHKFTNVDGTNGRTVLPF 170 (495)
T ss_dssp SHHHHHHHHHTTCTTCEEESCCCSSSCCEEEEESSTTCCEEECHH---HHHH----HHH-HHHHHHHCSSSSTTTTTCSC
T ss_pred cHHHHHHHHHcCCcceeecccccCCCceEEEecCCCCceeecCHH---HHHH----HHH-HHHHHHHccchhhhhhcCCC
Confidence 34666666678765443332 1 12334444 554444421 1100 011 11122222000 00000000
Q ss_pred ccc------cccCCcccHHHHHHHcC--CChhHHHHHHHHHhhccCCCCCCCcHHHHHHHHHHHHHHhhhccCCCeEEEe
Q 014768 156 THE------GMDLTRVTTRELIAKYG--LDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYP 227 (419)
Q Consensus 156 ~~~------~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p 227 (419)
... ...+...++.+|+++.+ +++..+.++..........+....++...+..+.........+....+.+++
T Consensus 171 ~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (495)
T 2vvm_A 171 PHDMFYVPEFRKYDEMSYSERIDQIRDELSLNERSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKF 250 (495)
T ss_dssp TTSTTSSTTHHHHHTSBHHHHHHHHGGGCCHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEE
T ss_pred CCCcccCcchhhhhhhhHHHHHHHhhccCCHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEe
Confidence 000 00234678999998876 7777777766555433322222233333332211100000000011234578
Q ss_pred cCCcCcHHHHHHHHHHHcC-cEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCC
Q 014768 228 LYGLGELPQAFARLSAVYG-GTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSY 287 (419)
Q Consensus 228 ~gG~~~l~~al~~~~~~~G-~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~ 287 (419)
+||++.++++|.+.+++.| ++|+++++|++|..+ ++++ .|++ +|++++||+||++++.
T Consensus 251 ~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~-~~~v-~v~~~~g~~~~ad~vI~a~~~ 310 (495)
T 2vvm_A 251 KDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNE-RDAA-RVTARDGREFVAKRVVCTIPL 310 (495)
T ss_dssp TTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEEC-SSSE-EEEETTCCEEEEEEEEECCCG
T ss_pred CCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEEc-CCEE-EEEECCCCEEEcCEEEECCCH
Confidence 9999999999999999999 999999999999984 6665 4555 7778999999998854
No 9
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.89 E-value=1.8e-23 Score=207.25 Aligned_cols=247 Identities=16% Similarity=0.129 Sum_probs=142.2
Q ss_pred cceEEEECCCchHHHHhhcccc-CCCeEEEeccCCCCCCcccccchHHHHHhhcCCCCCCCCCCCCcceEEccCcceeec
Q 014768 4 EYDVIVLGTGLKECILSGLLSV-DGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIA 82 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~-~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~gp~~~~~ 82 (419)
++||||||||++||+||++|++ .|++|+||||++++||+++|.... .+|.+|.|||++..
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~-------------------~G~~~D~G~h~~~~ 70 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTP-------------------EGFLYDVGGHVIFS 70 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECT-------------------TSCEEESSCCCCCC
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEec-------------------CCEEEEeCceEecC
Confidence 5899999999999999999998 599999999999999999985311 27999999999976
Q ss_pred Cch-hhHHHHhcCCcceeeEEEecc-eeEEeCCeEEEecCChhhhhccCCCChHhHHHHHHHHHHHhhcccCCCCccccc
Q 014768 83 NGA-LVRVLIHTDVTKYLYFKAVDG-SFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGM 160 (419)
Q Consensus 83 ~~~-~~~~l~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (419)
..+ +.+++.+.+... .++...++ .+.+.+|+.+..|... .+.. +......+....+......... .
T Consensus 71 ~~~~v~~l~~e~~~~~-~~~~~~~~~~~i~~~g~~~~~p~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~-~------- 138 (513)
T 4gde_A 71 HYKYFDDCLDEALPKE-DDWYTHQRISYVRCQGQWVPYPFQN--NISM-LPKEEQVKCIDGMIDAALEARV-A------- 138 (513)
T ss_dssp CBHHHHHHHHHHSCSG-GGEEEEECCEEEEETTEEEESSGGG--GGGG-SCHHHHHHHHHHHHHHHHHHHT-C-------
T ss_pred CCHHHHHHHHHhCCcc-ceeEEecCceEEEECCeEeecchhh--hhhh-cchhhHHHHHHHHHHHHHhhhc-c-------
Confidence 655 444444443332 22333333 3556788888877431 1111 1100111111222221111110 0
Q ss_pred cCCcccHHHHHHHcCCChhHH-HHHHHHH-hhccC----------CCCCCCc-HHHHHHHHHHHHHHhhhccCCCeEEEe
Q 014768 161 DLTRVTTRELIAKYGLDDNTI-DFIGHAL-ALHRD----------DRYLNEP-ALDTVKRMKLYAESIARFQGGSPYIYP 227 (419)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~-~~l~~~~-~~~~~----------~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~p 227 (419)
.....++.+|+.+. +.+.+. .++.+.. .++.. ...+... ........ ........+.....+.+|
T Consensus 139 ~~~~~s~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 216 (513)
T 4gde_A 139 NTKPKTFDEWIVRM-MGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNV-ILGKTAGNWGPNATFRFP 216 (513)
T ss_dssp CSCCCSHHHHHHHH-HHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHH-HHTCCCCSCBTTBEEEEE
T ss_pred cccccCHHHHHHHh-hhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhh-hhcccccccccccceeec
Confidence 11345666765443 112221 1122111 11110 1111111 11111110 000001111112334454
Q ss_pred -cCCcCcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEeCCC
Q 014768 228 -LYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPS 286 (419)
Q Consensus 228 -~gG~~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~~g~~i~ad~VV~~~~ 286 (419)
+||++.++++|++.+.+.|++|++|++|++|.. +++++ +..+|+++.||+||++..
T Consensus 217 ~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~-~~~~v--~~~~G~~~~ad~vI~t~P 273 (513)
T 4gde_A 217 ARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNA-NNKTV--TLQDGTTIGYKKLVSTMA 273 (513)
T ss_dssp SSSHHHHHHHHHHHTSCGGGEEESGGGCEEEEET-TTTEE--EETTSCEEEEEEEEECSC
T ss_pred ccCCHHHHHHHHHHHHHhcCeeeecceEEEEEEc-cCCEE--EEcCCCEEECCEEEECCC
Confidence 799999999999999999999999999999997 36643 233899999999999984
No 10
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.89 E-value=6.5e-22 Score=196.25 Aligned_cols=256 Identities=18% Similarity=0.208 Sum_probs=157.3
Q ss_pred CCCcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccccchHHHHHhhcCCCCCCCCCCCCcceEEccCccee
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFI 80 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~gp~~~ 80 (419)
|+..+||||||||++||+||++|+++|++|+|+|+++++||++++.... .++.+|+|++++
T Consensus 1 m~~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t~~~~-------------------~g~~~d~G~~~~ 61 (520)
T 1s3e_A 1 MSNKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYTLRNQ-------------------KVKYVDLGGSYV 61 (520)
T ss_dssp --CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEECCT-------------------TTSCEESSCCEE
T ss_pred CCCCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceeecccC-------------------CCcccccCceEe
Confidence 7778899999999999999999999999999999999999999988631 168899999998
Q ss_pred ecCc-hhhHHHHhcCCcceeeEEEecc-eeEEeCCeEEEecCChhhhhccCCCChHhHHHHHHHHHHHhhcccCCC--Cc
Q 014768 81 IANG-ALVRVLIHTDVTKYLYFKAVDG-SFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDP--KT 156 (419)
Q Consensus 81 ~~~~-~~~~~l~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 156 (419)
.... .+.+++.+.++..+... .+. .+.+.+|..+..+.. +.. .....+...+.+++..+.......+ ..
T Consensus 62 ~~~~~~~~~l~~~lgl~~~~~~--~~~~~~~~~~g~~~~~~~~----~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (520)
T 1s3e_A 62 GPTQNRILRLAKELGLETYKVN--EVERLIHHVKGKSYPFRGP----FPP-VWNPITYLDHNNFWRTMDDMGREIPSDAP 134 (520)
T ss_dssp CTTCHHHHHHHHHTTCCEEECC--CSSEEEEEETTEEEEECSS----SCC-CCSHHHHHHHHHHHHHHHHHHTTSCTTCG
T ss_pred cCCcHHHHHHHHHcCCcceecc--cCCceEEEECCEEEEecCC----CCC-CCCHHHHHHHHHHHHHHHHHHhhcCcCCC
Confidence 7654 45555555676543211 122 223456665554421 110 0111122233344333333221110 00
Q ss_pred ccc---ccCCcccHHHHHHHcCCChhHHHHHHHHHhhccCCCCCCCcHHHHHHHHHHH--HHHhhhccCCCeEEEecCCc
Q 014768 157 HEG---MDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLY--AESIARFQGGSPYIYPLYGL 231 (419)
Q Consensus 157 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~p~gG~ 231 (419)
+.. ..+...++.+|+++...++.++.++..........+....+....+..+..+ ...+..........++.||+
T Consensus 135 ~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG~ 214 (520)
T 1s3e_A 135 WKAPLAEEWDNMTMKELLDKLCWTESAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGS 214 (520)
T ss_dssp GGSTTHHHHHTSBHHHHHHHHCSSHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTCT
T ss_pred ccccchhhhhccCHHHHHHhhCCCHHHHHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCCH
Confidence 000 0134678999999988888777766654332222222222332222111100 00000000123456899999
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSY 287 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~ 287 (419)
+.++++|++.+ |++|++|++|++|..+ ++++. |++ +|+++.||+||++.+.
T Consensus 215 ~~l~~~l~~~l---g~~i~~~~~V~~i~~~-~~~v~-v~~~~g~~~~ad~VI~a~p~ 266 (520)
T 1s3e_A 215 GQVSERIMDLL---GDRVKLERPVIYIDQT-RENVL-VETLNHEMYEAKYVISAIPP 266 (520)
T ss_dssp HHHHHHHHHHH---GGGEESSCCEEEEECS-SSSEE-EEETTSCEEEESEEEECSCG
T ss_pred HHHHHHHHHHc---CCcEEcCCeeEEEEEC-CCeEE-EEECCCeEEEeCEEEECCCH
Confidence 99999998765 8899999999999984 77766 666 8889999999998854
No 11
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.89 E-value=3.2e-22 Score=196.49 Aligned_cols=250 Identities=16% Similarity=0.139 Sum_probs=154.4
Q ss_pred ceEEEECCCchHHHHhhccccCCC--eEEEeccCCCCCCcccccchHHHHHhhcCCCCCCCCCCCCcceEEccCcceeec
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGL--KVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIA 82 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~--~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~gp~~~~~ 82 (419)
+||+|||||++||+||++|+++|+ +|+|||+++++||++++.... .++.+|.|++.+..
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t~~~~-------------------~g~~~d~G~~~~~~ 63 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGP-------------------NGAIFELGPRGIRP 63 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCEEECT-------------------TSCEEESSCCCBCC
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEEEecc-------------------CCeEEEeCCCcccC
Confidence 599999999999999999999999 999999999999999986531 27899999998865
Q ss_pred Cc----hhhHHHHhcCCcceeeEEEe-----cceeEEeCCeEEEecCChhhhhccCCCChHhHHHHHHHHHHHhhcccCC
Q 014768 83 NG----ALVRVLIHTDVTKYLYFKAV-----DGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDEND 153 (419)
Q Consensus 83 ~~----~~~~~l~~~~~~~~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (419)
.+ .+.+++.+.++.+.+..... ...+.+.+|+...+|.. ...+...+..+ .+.. +...+.....
T Consensus 64 ~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~-~~~~~~~~~~~-~~~~---~~~~~~~~~~-- 136 (477)
T 3nks_A 64 AGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRFLYVGGALHALPTG-LRGLLRPSPPF-SKPL---FWAGLRELTK-- 136 (477)
T ss_dssp CHHHHHHHHHHHHHTTCGGGEEEECTTSHHHHCEEEEETTEEEECCCS-SCC---CCTTS-CSCS---SHHHHTTTTS--
T ss_pred CCcccHHHHHHHHHcCCcceeeecCCCCchhcceEEEECCEEEECCCC-hhhcccccchh-hhHH---HHHHHHhhhc--
Confidence 32 24555666777754333221 12456778888888754 22221111111 1000 1111222211
Q ss_pred CCccccccCCcccHHHHHHHcCCChhH-HHHHHHHHhhccCCCCCCCcHHHHHHHHHHHHHHhh----------------
Q 014768 154 PKTHEGMDLTRVTTRELIAKYGLDDNT-IDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIA---------------- 216 (419)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 216 (419)
+. . .....++.+|+++. +...+ ..++.+........+....+....+..+.......+
T Consensus 137 ~~--~--~~~~~s~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~ 211 (477)
T 3nks_A 137 PR--G--KEPDETVHSFAQRR-LGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQP 211 (477)
T ss_dssp CC--C--CSSCCBHHHHHHHH-HCHHHHHHTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----CC
T ss_pred CC--C--CCCCcCHHHHHHHh-hCHHHHHHHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccCC
Confidence 00 0 12457888888764 22332 333333222111111112222222221111100000
Q ss_pred --------hccCCCeEEEecCCcCcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEeCCCC
Q 014768 217 --------RFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSY 287 (419)
Q Consensus 217 --------~~~g~~~~~~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~~g~~i~ad~VV~~~~~ 287 (419)
.. ...++++++||++.++++|++.+++.|++|++|++|++|..+ +++++.|+++++++.||+||+++..
T Consensus 212 ~~~~~~~~~~-~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~-~~~~~~v~~~~~~~~ad~vv~a~p~ 288 (477)
T 3nks_A 212 DSALIRQALA-ERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQ-AEGRWKVSLRDSSLEADHVISAIPA 288 (477)
T ss_dssp CCHHHHHHHH-TTCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEC-GGGCEEEECSSCEEEESEEEECSCH
T ss_pred chhhhhhhcc-cCccEEEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEc-CCceEEEEECCeEEEcCEEEECCCH
Confidence 01 123578999999999999999999999999999999999984 6554567777778999999998754
No 12
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.88 E-value=1.1e-21 Score=192.60 Aligned_cols=315 Identities=12% Similarity=0.079 Sum_probs=183.1
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccccchHHHHHhhcCCCCCCCCCCCCcceEEccCcceeec
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIA 82 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~gp~~~~~ 82 (419)
..+||+|||||++||+||+.|+++|++|+|+|+++.+||+++|.+.. ++.+|.|++++..
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~--------------------g~~~~~g~~~~~~ 74 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALA--------------------GYLVEQGPNSFLD 74 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEET--------------------TEEEESSCCCEET
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccC--------------------CeeeecChhhhhh
Confidence 35799999999999999999999999999999999999999998743 7999999999987
Q ss_pred Cch-hhHHHHhcCCcceeeEEEe--cceeEEeCCeEEEecCChhhhhccCCCChHhHHHHHHHHHHHhhcccCCCCcccc
Q 014768 83 NGA-LVRVLIHTDVTKYLYFKAV--DGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEG 159 (419)
Q Consensus 83 ~~~-~~~~l~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (419)
..+ +.+++.+.++...+..... ...+.+.+|+.+.+|....+.+...+.++.++ .+.+........ .
T Consensus 75 ~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~---~- 144 (478)
T 2ivd_A 75 REPATRALAAALNLEGRIRAADPAAKRRYVYTRGRLRSVPASPPAFLASDILPLGAR------LRVAGELFSRRA---P- 144 (478)
T ss_dssp TCHHHHHHHHHTTCGGGEECSCSSCCCEEEEETTEEEECCCSHHHHHTCSSSCHHHH------HHHHGGGGCCCC---C-
T ss_pred hhHHHHHHHHHcCCcceeeecCccccceEEEECCEEEECCCCHHHhccCCCCCHHHH------HHHhhhhhcCCC---C-
Confidence 544 5555666787655443221 12345678888888765333333333332211 112222211110 0
Q ss_pred ccCCcccHHHHHHHcCCChh-HHHHHHHHHhhccCCCCCCCcHHHHHHHHHHHHH-------Hhh-h----------ccC
Q 014768 160 MDLTRVTTRELIAKYGLDDN-TIDFIGHALALHRDDRYLNEPALDTVKRMKLYAE-------SIA-R----------FQG 220 (419)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-~----------~~g 220 (419)
.....++.+|+++. +.+. ...++.+........+....++...+..+..+.. .+. . ...
T Consensus 145 -~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (478)
T 2ivd_A 145 -EGVDESLAAFGRRH-LGHRATQVLLDAVQTGIYAGDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAGT 222 (478)
T ss_dssp -TTCCCBHHHHHHHH-TCHHHHHHTHHHHHHHHHCCCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----CC
T ss_pred -CCCCCCHHHHHHHh-hCHHHHHHHHHHHhceeecCCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCcccc
Confidence 13567899999875 3333 3334443332222222112222222222211110 000 0 001
Q ss_pred C----CeEEEecCCcCcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe----CCeEEEcCEEEeCCCCC----
Q 014768 221 G----SPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGETAKCKKVVCDPSYL---- 288 (419)
Q Consensus 221 ~----~~~~~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~----~g~~i~ad~VV~~~~~~---- 288 (419)
. ..+++++||++.|+++|++.+ |++|+++++|++|..+ ++++ .|++ +|++++||+||++++..
T Consensus 223 ~~~~~~~~~~~~gG~~~l~~~l~~~l---g~~i~~~~~V~~i~~~-~~~~-~v~~~~~~~g~~~~ad~vV~a~~~~~~~~ 297 (478)
T 2ivd_A 223 APKLSGALSTFDGGLQVLIDALAASL---GDAAHVGARVEGLARE-DGGW-RLIIEEHGRRAELSVAQVVLAAPAHATAK 297 (478)
T ss_dssp SCCCCCCEEEETTCTHHHHHHHHHHH---GGGEESSEEEEEEECC---CC-EEEEEETTEEEEEECSEEEECSCHHHHHH
T ss_pred cccccccEEEECCCHHHHHHHHHHHh---hhhEEcCCEEEEEEec-CCeE-EEEEeecCCCceEEcCEEEECCCHHHHHH
Confidence 2 567899999999999999877 7899999999999984 6553 5554 67889999999988543
Q ss_pred --Cccc-------c--ccCeeEEEEEEecCCCCCCCCCCeEEEEecCCcCCCCCcEEEEEeCCC-ccccCCCcEEEEEEe
Q 014768 289 --PNKV-------R--KVGRVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCCSYS-HNVAPKGKFIAFVST 356 (419)
Q Consensus 289 --~~~~-------~--~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~v~~~s~~-~~~aP~G~~~l~~~~ 356 (419)
|... . ..+...+.+...+.++.... ... ..+++... ..+...+...+.. +..+|+|+.++.+.+
T Consensus 298 ll~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~-~~~-~~~~~~~~--~~~~~~~~~~s~~~~~~~p~g~~~l~~~~ 373 (478)
T 2ivd_A 298 LLRPLDDALAALVAGIAYAPIAVVHLGFDAGTLPAP-DGF-GFLVPAEE--QRRMLGAIHASTTFPFRAEGGRVLYSCMV 373 (478)
T ss_dssp HHTTTCHHHHHHHHTCCBCCEEEEEEEECTTSSCCC-CSS-EEECCGGG--CCSCCEEEEHHHHCGGGBSTTCEEEEEEE
T ss_pred HhhccCHHHHHHHhcCCCCcEEEEEEEEccccCCCC-Cce-EEEecCCC--CCceEEEEEEcccCCCcCCCCCEEEEEEe
Confidence 1110 0 01223333334444431111 111 22343221 1233445555544 778899988876665
Q ss_pred ec
Q 014768 357 EA 358 (419)
Q Consensus 357 ~~ 358 (419)
..
T Consensus 374 ~~ 375 (478)
T 2ivd_A 374 GG 375 (478)
T ss_dssp EC
T ss_pred CC
Confidence 43
No 13
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.86 E-value=1e-20 Score=184.44 Aligned_cols=251 Identities=18% Similarity=0.218 Sum_probs=151.0
Q ss_pred CC-CcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccccchHHHHHhhcCCCCCCCCCCCCcceEEccCcce
Q 014768 1 MD-EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKF 79 (419)
Q Consensus 1 m~-~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~gp~~ 79 (419)
|+ .++||+|||||++||+||++|+++|++|+|+|+++++||++++.... ++.+|.|+++
T Consensus 1 m~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~--------------------g~~~~~g~~~ 60 (453)
T 2yg5_A 1 VPTLQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWTDTID--------------------GAVLEIGGQW 60 (453)
T ss_dssp -CEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCEEEET--------------------TEEEECSCCC
T ss_pred CCCCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceeccccC--------------------CceeccCCeE
Confidence 44 46899999999999999999999999999999999999999987632 6889999998
Q ss_pred eecCc-hhhHHHHhcCCcceeeEEEecceeE-EeC-CeEEEecCChhhhhccCCCChHhHHHHHHHHH----HHhhcccC
Q 014768 80 IIANG-ALVRVLIHTDVTKYLYFKAVDGSFV-YNK-GKVHKVPATDMEALKSPLMGIFEKRRARKFFI----YVQDYDEN 152 (419)
Q Consensus 80 ~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~-~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 152 (419)
+.... .+.+++.+.++..+..+. +.... +.+ |....+... .. . ........+.+++. +.......
T Consensus 61 ~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~g~~~~~~~~-~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (453)
T 2yg5_A 61 VSPDQTALISLLDELGLKTFERYR--EGESVYISSAGERTRYTGD-SF----P-TNETTKKEMDRLIDEMDDLAAQIGAE 132 (453)
T ss_dssp BCTTCHHHHHHHHHTTCCEEECCC--CSEEEEECTTSCEEEECSS-SC----S-CCHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred ecCccHHHHHHHHHcCCccccccc--CCCEEEEeCCCceeeccCC-CC----C-CChhhHHHHHHHHHHHHHHHhhcCCC
Confidence 86543 455556556765432221 11222 222 544443211 00 0 00001111222221 11111111
Q ss_pred CCCccc-cccCCcccHHHHHHHcCCChhHHHHHHHHHhhccCCCCC-CCcHHHHHHHHHHHHHHhhhc-----cCCCeEE
Q 014768 153 DPKTHE-GMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYL-NEPALDTVKRMKLYAESIARF-----QGGSPYI 225 (419)
Q Consensus 153 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~ 225 (419)
.+.... ...+...++.+|+++.+.++.++.++..........+.. ..+....+.. +...+.+ ......+
T Consensus 133 ~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~----~~~~g~~~~~~~~~~~~~~ 208 (453)
T 2yg5_A 133 EPWAHPLARDLDTVSFKQWLINQSDDAEARDNIGLFIAGGMLTKPAHSFSALQAVLM----AASAGSFSHLVDEDFILDK 208 (453)
T ss_dssp CGGGSTTHHHHHSSBHHHHHHHHCSCHHHHHHHHHHHCCCCCCSCTTSSBHHHHHHH----HHHTTCHHHHHCHHHHTCE
T ss_pred CCCCCcchhhhhhccHHHHHHhhcCCHHHHHHHHHHHHhhcccCCcccccHHHHHHH----hccCCcHhhhccCCCcceE
Confidence 110000 001346789999999888887777766544222221111 2233222211 1111100 0011246
Q ss_pred EecCCcCcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEeCCCC
Q 014768 226 YPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSY 287 (419)
Q Consensus 226 ~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~~g~~i~ad~VV~~~~~ 287 (419)
+++||++.++++|++.+ |++|++|++|++|..+ +++.+.|+++|+++.||+||++++.
T Consensus 209 ~~~gG~~~l~~~l~~~l---g~~i~~~~~V~~i~~~-~~~~v~v~~~~~~~~ad~VI~a~p~ 266 (453)
T 2yg5_A 209 RVIGGMQQVSIRMAEAL---GDDVFLNAPVRTVKWN-ESGATVLADGDIRVEASRVILAVPP 266 (453)
T ss_dssp EETTCTHHHHHHHHHHH---GGGEECSCCEEEEEEE-TTEEEEEETTTEEEEEEEEEECSCG
T ss_pred EEcCChHHHHHHHHHhc---CCcEEcCCceEEEEEe-CCceEEEEECCeEEEcCEEEEcCCH
Confidence 89999999999998765 8899999999999984 6652346678899999999998854
No 14
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.86 E-value=3.2e-21 Score=188.88 Aligned_cols=251 Identities=12% Similarity=0.164 Sum_probs=145.0
Q ss_pred CCC-cceEEEECCCchHHHHhhccccCC------CeEEEeccCCCCCCcccccchHHHHHhhcCCCCCCCCCCCCcceEE
Q 014768 1 MDE-EYDVIVLGTGLKECILSGLLSVDG------LKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNV 73 (419)
Q Consensus 1 m~~-~~dvvIIGaGi~Gl~aA~~La~~G------~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 73 (419)
|+. .+||+|||||++||+||++|+++| ++|+|||+++++||++++.... ++.+
T Consensus 1 M~~~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~--------------------g~~~ 60 (470)
T 3i6d_A 1 MSDGKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKD--------------------GYII 60 (470)
T ss_dssp ----CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCT--------------------TCCE
T ss_pred CCCCCCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccC--------------------CEEe
Confidence 543 489999999999999999999999 9999999999999999987632 6889
Q ss_pred ccCcceeecCc-hhhHHHHhcCCcceeeEEEecceeEEeCCeEEEecCChh-------hh-hccCCCChHhHHHHHHHHH
Q 014768 74 DMIPKFIIANG-ALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDM-------EA-LKSPLMGIFEKRRARKFFI 144 (419)
Q Consensus 74 d~gp~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~ 144 (419)
|.|++++.... .+.+++.+.++...+........+.+.+|....+|.... .. +...+.+..++ +.....
T Consensus 61 d~G~~~~~~~~~~~~~l~~~lgl~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~--~~~~~~ 138 (470)
T 3i6d_A 61 ERGPDSFLERKKSAPQLVKDLGLEHLLVNNATGQSYVLVNRTLHPMPKGAVMGIPTKIAPFVSTGLFSLSGK--ARAAMD 138 (470)
T ss_dssp ESSCCCEETTCTHHHHHHHHTTCCTTEEECCCCCEEEECSSCEEECCC---------------------CCS--HHHHHH
T ss_pred ccChhhhhhCCHHHHHHHHHcCCcceeecCCCCccEEEECCEEEECCCCcccCCcCchHHhhccCcCCHHHH--HHHhcC
Confidence 99998876543 455666667887654422233345566777766653210 00 11111111010 111111
Q ss_pred HHhhcccCCCCccccccCCcccHHHHHHHcCCChhHHHHHHHHH-hhccCCCCCCCcHHHHHHHHH-------HHHHHhh
Q 014768 145 YVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHAL-ALHRDDRYLNEPALDTVKRMK-------LYAESIA 216 (419)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 216 (419)
.+. . .. ......++.+|++...-......++.+.. .++.. +....+....+..+. .+...+.
T Consensus 139 ~~~---~---~~---~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 208 (470)
T 3i6d_A 139 FIL---P---AS---KTKDDQSLGEFFRRRVGDEVVENLIEPLLSGIYAG-DIDKLSLMSTFPQFYQTEQKHRSLILGMK 208 (470)
T ss_dssp HHS---C---CC---SSSSCCBHHHHHHHHSCHHHHHHTHHHHHHHTTCS-CTTTBBHHHHCGGGCC-------------
T ss_pred ccc---C---CC---CCCCCcCHHHHHHHhcCHHHHHHhccchhcEEecC-CHHHhhHHHHHHHHHHHHHhcCcHHHHHH
Confidence 111 0 00 01356788999877532222333333332 22221 111111111110000 0000000
Q ss_pred h-----------ccCCCeEEEecCCcCcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeC
Q 014768 217 R-----------FQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCD 284 (419)
Q Consensus 217 ~-----------~~g~~~~~~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~ 284 (419)
. ......++++++|++.++++|++.+.+ ++|+++++|++|..+ ++++ .|++ +|+++.||+||++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~-~~~~-~v~~~~g~~~~ad~vi~a 284 (470)
T 3i6d_A 209 KTRPQGSGQQLTAKKQGQFQTLSTGLQTLVEEIEKQLKL--TKVYKGTKVTKLSHS-GSCY-SLELDNGVTLDADSVIVT 284 (470)
T ss_dssp ------------------EEEETTCTHHHHHHHHHTCCS--EEEECSCCEEEEEEC-SSSE-EEEESSSCEEEESEEEEC
T ss_pred hhccccccccccccCCceEEEeCChHHHHHHHHHHhcCC--CEEEeCCceEEEEEc-CCeE-EEEECCCCEEECCEEEEC
Confidence 0 000235779999999999999987654 899999999999984 6665 4666 7888999999998
Q ss_pred CCC
Q 014768 285 PSY 287 (419)
Q Consensus 285 ~~~ 287 (419)
+..
T Consensus 285 ~p~ 287 (470)
T 3i6d_A 285 APH 287 (470)
T ss_dssp SCH
T ss_pred CCH
Confidence 743
No 15
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.86 E-value=5.4e-21 Score=188.98 Aligned_cols=256 Identities=12% Similarity=0.077 Sum_probs=150.5
Q ss_pred CCCcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccccchHHHHHhhcCCCCCCCCCCCCcceEEccCccee
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFI 80 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~gp~~~ 80 (419)
|.+.+||+|||||++||+||+.|+++|++|+|+|+++.+||++++.... ++.+|.|++++
T Consensus 10 ~~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~--------------------g~~~~~g~~~~ 69 (504)
T 1sez_A 10 HSSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQD--------------------GLIWDEGANTM 69 (504)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEET--------------------TEEEESSCCCB
T ss_pred cCCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccC--------------------CeEEecCCccc
Confidence 4456899999999999999999999999999999999999999988642 78999999998
Q ss_pred ecCc-hhhHHHHhcCCcceeeEEEe-cceeEEeCCeEEEecCChhhhhccCCCChHhHHHHHHHHHHHhhcccCCCCccc
Q 014768 81 IANG-ALVRVLIHTDVTKYLYFKAV-DGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHE 158 (419)
Q Consensus 81 ~~~~-~~~~~l~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (419)
.... .+.+++.+.++...+.+... ...+.+.+|..+.+|.+....+...+.+..++ +......+..... .+. .
T Consensus 70 ~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~--~ 144 (504)
T 1sez_A 70 TESEGDVTFLIDSLGLREKQQFPLSQNKRYIARNGTPVLLPSNPIDLIKSNFLSTGSK--LQMLLEPILWKNK-KLS--Q 144 (504)
T ss_dssp CCCSHHHHHHHHHTTCGGGEECCSSCCCEEEESSSSEEECCSSHHHHHHSSSSCHHHH--HHHHTHHHHC----------
T ss_pred ccCcHHHHHHHHHcCCcccceeccCCCceEEEECCeEEECCCCHHHHhccccCCHHHH--HHHhHhhhccCcc-ccc--c
Confidence 7554 45566666788765444322 12345678888888755333333334433221 1111111110000 000 0
Q ss_pred cccCCcccHHHHHHHcCCChhHHHHHHHHHh-hccCCCCCCCcHHHHHHHHHHH-----------HHH-hhhcc------
Q 014768 159 GMDLTRVTTRELIAKYGLDDNTIDFIGHALA-LHRDDRYLNEPALDTVKRMKLY-----------AES-IARFQ------ 219 (419)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~~-~~~~~------ 219 (419)
......++.+|+++..-++....++.+... .+.. +....++...+..+..+ +.. +....
T Consensus 145 -~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 222 (504)
T 1sez_A 145 -VSDSHESVSGFFQRHFGKEVVDYLIDPFVAGTCGG-DPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGP 222 (504)
T ss_dssp ----CCCBHHHHHHHHHCHHHHHTTHHHHHHHHHSC-CGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC---------
T ss_pred -cCCCCccHHHHHHHHcCHHHHHHHHHHHHccccCC-ChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhcccccccccc
Confidence 012357899998765222223333443322 2221 11111221111111110 000 00000
Q ss_pred --------CCCeEEEecCCcCcHHHHHHHHHHHcC-cEEEcCCccceEEEcCCCc-----EEEEEe---CC---eEEEcC
Q 014768 220 --------GGSPYIYPLYGLGELPQAFARLSAVYG-GTYMLNKPECKVEFDEEGK-----VVGVTS---EG---ETAKCK 279 (419)
Q Consensus 220 --------g~~~~~~p~gG~~~l~~al~~~~~~~G-~~i~~~~~V~~I~~~~~~~-----v~gV~~---~g---~~i~ad 279 (419)
...++++++||++.|+++|++.+ | ++|++|++|++|..+ +++ .+.|++ +| +++.||
T Consensus 223 ~~~~~~~~~~~~~~~~~GG~~~l~~~l~~~l---~~~~i~~~~~V~~I~~~-~~~~~~~~~~~v~~~~~~g~~~~~~~ad 298 (504)
T 1sez_A 223 PKTSANKKRQRGSFSFLGGMQTLTDAICKDL---REDELRLNSRVLELSCS-CTEDSAIDSWSIISASPHKRQSEEESFD 298 (504)
T ss_dssp -CCCSCCSTTCSCBEETTCTHHHHHHHHTTS---CTTTEETTCCEEEEEEE-CSSSSSSCEEEEEEBCSSSSCBCCCEES
T ss_pred cchhhccccCCceEeeCcHHHHHHHHHHhhc---ccceEEcCCeEEEEEec-CCCCcccceEEEEEcCCCCccceeEECC
Confidence 01246789999999999998754 5 789999999999984 554 144544 45 679999
Q ss_pred EEEeCCCC
Q 014768 280 KVVCDPSY 287 (419)
Q Consensus 280 ~VV~~~~~ 287 (419)
+||++.+.
T Consensus 299 ~VI~a~p~ 306 (504)
T 1sez_A 299 AVIMTAPL 306 (504)
T ss_dssp EEEECSCH
T ss_pred EEEECCCH
Confidence 99998854
No 16
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.85 E-value=2.5e-20 Score=182.81 Aligned_cols=250 Identities=12% Similarity=0.149 Sum_probs=153.7
Q ss_pred cceEEEECCCchHHHHhhccccCC--CeEEEeccCCCCCCcccccchHHHHHhhcCCCCCCCCCCCCcceEEccCcceee
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDG--LKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFII 81 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G--~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~gp~~~~ 81 (419)
.+||+|||||++||+||++|+++| ++|+|||+++.+||++++.... ++.+|.|++.+.
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~--------------------g~~~~~g~~~~~ 63 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYRED--------------------GFTIERGPDSYV 63 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECST--------------------TCCEESSCCCEE
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeC--------------------CEEEecCchhhh
Confidence 589999999999999999999999 9999999999999999987632 688999998887
Q ss_pred cCc-hhhHHHHhcCCcceeeEEEecceeEEeCCeEEEecCCh--------hhhhccCCCChHhHHHHHHHHHHHhhcccC
Q 014768 82 ANG-ALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATD--------MEALKSPLMGIFEKRRARKFFIYVQDYDEN 152 (419)
Q Consensus 82 ~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (419)
... .+.+++.+.++...+........+.+.+|....+|... ...+...+.+...+ + .+.........
T Consensus 64 ~~~~~~~~l~~~lg~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~- 139 (475)
T 3lov_A 64 ARKHILTDLIEAIGLGEKLVRNNTSQAFILDTGGLHPIPKGAVMGIPTDLDLFRQTTLLTEEEK--Q-EVADLLLHPSD- 139 (475)
T ss_dssp TTSTHHHHHHHHTTCGGGEEECCCCCEEEEETTEEEECCSSEETTEESCHHHHTTCSSSCHHHH--H-HHHHHHHSCCT-
T ss_pred cccHHHHHHHHHcCCcceEeecCCCceEEEECCEEEECCCcccccCcCchHHHhhccCCChhHH--H-HhhCcccCCcc-
Confidence 543 45566666788765443223345566788777766421 22233344443222 2 22222221110
Q ss_pred CCCccccccCCcccHHHHHHHcCCChhHHHHHHHHH-hhccCCCCCCCcHHHHHHHHHHH-------HHHhhhc------
Q 014768 153 DPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHAL-ALHRDDRYLNEPALDTVKRMKLY-------AESIARF------ 218 (419)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~------ 218 (419)
+. .......++.+|+++..-......++.+.. ..+.. +...-+....+..+..+ ...+...
T Consensus 140 -~~---~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 214 (475)
T 3lov_A 140 -SL---RIPEQDIPLGEYLRPRLGDALVEKLIEPLLSGIYAG-NIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLDQL 214 (475)
T ss_dssp -TC---CCCSSCCBHHHHHHHHHCHHHHHHTHHHHHHGGGCC-CTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC----
T ss_pred -cc---cCCCCCcCHHHHHHHHhCHHHHHHHHHHHhceeecC-ChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhcccccc
Confidence 00 001356788998876422222333344333 22221 11111111111111111 1110000
Q ss_pred --------cCCCeEEEecCCcCcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCC
Q 014768 219 --------QGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSY 287 (419)
Q Consensus 219 --------~g~~~~~~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~ 287 (419)
.....++++++|++.++++|++.+.+ ++|++|++|++|..+ ++++ .|++ +| ++.||+||+++..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~-~~~~-~v~~~~g-~~~ad~vV~a~p~ 287 (475)
T 3lov_A 215 PQTPQTTIKATGQFLSLETGLESLIERLEEVLER--SEIRLETPLLAISRE-DGRY-RLKTDHG-PEYADYVLLTIPH 287 (475)
T ss_dssp ----------CCSEEEETTCHHHHHHHHHHHCSS--CEEESSCCCCEEEEE-TTEE-EEECTTC-CEEESEEEECSCH
T ss_pred cccccccccCCCcEEeeCChHHHHHHHHHhhccC--CEEEcCCeeeEEEEe-CCEE-EEEECCC-eEECCEEEECCCH
Confidence 01346789999999999999987754 799999999999984 6665 4666 67 8999999998754
No 17
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.82 E-value=2.3e-19 Score=175.68 Aligned_cols=307 Identities=12% Similarity=0.106 Sum_probs=169.9
Q ss_pred CcceEEEECCCchHHHHhhccccCC-CeEEEeccCCCCCCccccc-chHHHHHhhcCCCCCCCCCCCCcceEEccCccee
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDG-LKVLHMDRNDYYGGESSSL-NLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFI 80 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G-~~V~vlE~~~~~GG~~~t~-~~~~~~~~~~~~~~~~~~~g~~~~~~~d~gp~~~ 80 (419)
+.+||+|||||++||+||++|+++| .+|+|+|+++.+||++++. .. .++.+|.|++.+
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~--------------------~g~~~~~g~~~~ 67 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDE--------------------NGFTWDLGGHVI 67 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECT--------------------TSCEEESSCCCB
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecC--------------------CCcEEeeCCccc
Confidence 4589999999999999999999999 7999999999999999985 32 279999999998
Q ss_pred ecCchhhHHHHhcCCcceeeEEEecceeEEeCCeEEEecCChhhhhccCCCChHhHHHHHHHHHHHhhcccCCCCccccc
Q 014768 81 IANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGM 160 (419)
Q Consensus 81 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (419)
....+.+..+++.-+.++... ....+.+.+|+.+.+|.+.. +. . +. .......+..++.... ..+
T Consensus 68 ~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~g~~~~~P~~~~--~~-~-l~--~~~~~~~~~~ll~~~~-~~~------ 132 (484)
T 4dsg_A 68 FSHYQYFDDVMDWAVQGWNVL--QRESWVWVRGRWVPYPFQNN--IH-R-LP--EQDRKRCLDELVRSHA-RTY------ 132 (484)
T ss_dssp CCSBHHHHHHHHHHCSCEEEE--ECCCEEEETTEEEESSGGGC--GG-G-SC--HHHHHHHHHHHHHHHH-CCC------
T ss_pred ccChHHHHHHHHHHhhhhhhc--cCceEEEECCEEEEeCccch--hh-h-CC--HHHHHHHHHHHHHHHh-ccC------
Confidence 766554444443222332221 12345567888888873211 11 1 11 1111111222222100 001
Q ss_pred cCCcccHHHHHHHcCCChhH-HHHHHHHH-hhccC------CCC----CCCc-HHHHHHHHHHHHHHhh--hccCCCeEE
Q 014768 161 DLTRVTTRELIAKYGLDDNT-IDFIGHAL-ALHRD------DRY----LNEP-ALDTVKRMKLYAESIA--RFQGGSPYI 225 (419)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~-~~~l~~~~-~~~~~------~~~----~~~~-~~~~~~~~~~~~~~~~--~~~g~~~~~ 225 (419)
.....++.+|+.+. +...+ ..++.+.. ..+.. ..+ +..+ ....+ ...+.... .+.....+.
T Consensus 133 ~~~~~s~~e~~~~~-~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~---~~~~~~~~~~~~~~~~~f~ 208 (484)
T 4dsg_A 133 TEPPNNFEESFTRQ-FGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIR---RNIQENRDDLGWGPNATFR 208 (484)
T ss_dssp SSCCSSHHHHHHHH-HHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHH---HHHHHTCCCCCCSTTSEEE
T ss_pred CCCCCCHHHHHHHH-hHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHH---HHHhhcccccCCCccceEE
Confidence 12456788877654 21111 11111111 11110 001 1111 11111 11111000 010134577
Q ss_pred Eec-CCcCcHHHHHHHHHHHcCcEEEcC--CccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC--ccc-------
Q 014768 226 YPL-YGLGELPQAFARLSAVYGGTYMLN--KPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP--NKV------- 292 (419)
Q Consensus 226 ~p~-gG~~~l~~al~~~~~~~G~~i~~~--~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~~--~~~------- 292 (419)
||. ||++.++++|++.+.+. +|+++ ++|++|.. ++++ |++ +|+++.||+||+++.... +.+
T Consensus 209 yp~~gG~~~l~~~la~~l~~~--~i~~~~~~~V~~I~~-~~~~---v~~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~ 282 (484)
T 4dsg_A 209 FPQRGGTGIIYQAIKEKLPSE--KLTFNSGFQAIAIDA-DAKT---ITFSNGEVVSYDYLISTVPFDNLLRMTKGTGFKG 282 (484)
T ss_dssp EESSSCTHHHHHHHHHHSCGG--GEEECGGGCEEEEET-TTTE---EEETTSCEEECSEEEECSCHHHHHHHEECSSCTT
T ss_pred eecCCCHHHHHHHHHhhhhhC--eEEECCCceeEEEEe-cCCE---EEECCCCEEECCEEEECCCHHHHHHHhhccCCCC
Confidence 886 89999999999877542 78999 56999997 3664 334 788999999999884320 001
Q ss_pred cc----------cCeeEEEEEEecCCCCCCCCCCeEEEEecCCcCCCCCcEEEEEeCCC-ccccCCCcEEEEEEeec
Q 014768 293 RK----------VGRVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCCSYS-HNVAPKGKFIAFVSTEA 358 (419)
Q Consensus 293 ~~----------~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~v~~~s~~-~~~aP~G~~~l~~~~~~ 358 (419)
+. +..+......++.+.+. +....+++++|+.+. +...+..+|.. |.+||+|++++++....
T Consensus 283 ~~~~~~~l~~l~y~s~~~v~l~~~~~~~~-~~~~~~~i~vp~~~~---~~~ri~~~s~~~p~~ap~g~~~l~~e~~~ 355 (484)
T 4dsg_A 283 YDEWPAIADKMVYSSTNVIGIGVKGTPPP-HLKTACWLYFPEDTS---PFYRATVFSNYSKYNVPEGHWSLMLEVSE 355 (484)
T ss_dssp GGGHHHHHHHCCEEEEEEEEEEEESCCCG-GGTTCCEEECCSTTC---SCSEEECGGGTCGGGSCTTEEEEEEEEEE
T ss_pred CHHHHHHHhCCCcCceEEEEEEEcCCCcc-cCCCCeEEEEEcCCC---eEEEEEeecCCCcccCCCCeEEEEEEEec
Confidence 00 01111111223333211 001234666776543 34456667776 89999999998877654
No 18
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.82 E-value=7.2e-20 Score=176.91 Aligned_cols=247 Identities=14% Similarity=0.114 Sum_probs=141.7
Q ss_pred CCcceEEEECCCchHHHHhhccccCC-CeEEEeccCCCCCCcccccchHHHHHhhcCCCCCCCCCCCCcceEEccCccee
Q 014768 2 DEEYDVIVLGTGLKECILSGLLSVDG-LKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFI 80 (419)
Q Consensus 2 ~~~~dvvIIGaGi~Gl~aA~~La~~G-~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~gp~~~ 80 (419)
++++||+|||||++||+||++|+++| ++|+|+|+++++||+++|.+.+ ++.+|.|++++
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~~~~--------------------G~~~d~G~~~~ 63 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSPNYH--------------------GRRYEMGAIMG 63 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCCEET--------------------TEECCSSCCCB
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccccCCC--------------------CcccccCceee
Confidence 35789999999999999999999999 9999999999999999998643 68899999988
Q ss_pred ecCch-hhHHHHhcCCcceeeEEEecceeEEeCCeEEEecCChhhhhccCCCChHhHHHHHHHHHHHhhcc-cCCCC-cc
Q 014768 81 IANGA-LVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYD-ENDPK-TH 157 (419)
Q Consensus 81 ~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~ 157 (419)
....+ +.+++.+.++.-. .......+.+.+|... .+..+...... + ...+.++...+.... ..... ..
T Consensus 64 ~~~~~~~~~l~~~~g~~~~--~~~~~~~~~~~~g~~~-~~~~~~~~~~~-----~-~~~~~~l~~~~~~~~~~~~~~~~~ 134 (424)
T 2b9w_A 64 VPSYDTIQEIMDRTGDKVD--GPKLRREFLHEDGEIY-VPEKDPVRGPQ-----V-MAAVQKLGQLLATKYQGYDANGHY 134 (424)
T ss_dssp CTTCHHHHHHHHHHCCCCC--SCCCCEEEECTTSCEE-CGGGCTTHHHH-----H-HHHHHHHHHHHHTTTTTTTSSSSS
T ss_pred cCCcHHHHHHHHHhCCccc--cccccceeEcCCCCEe-ccccCcccchh-----H-HHHHHHHHHHHhhhhhhcccccch
Confidence 76544 4444444555421 1111122334456543 22111100000 0 012233333332211 00000 00
Q ss_pred c-cccCCcccHHHHHHHcCCChhHHHHH-HHHHhhccCCCCCCCcHHHHHHHHHHHHHHhhhccCCCeEEEecCCcCcHH
Q 014768 158 E-GMDLTRVTTRELIAKYGLDDNTIDFI-GHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELP 235 (419)
Q Consensus 158 ~-~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~gG~~~l~ 235 (419)
. .......++.+|+++.+.+. +.+.+ .+....... +....++...+..+... . +..+ ...+.+.+.+|+++++
T Consensus 135 ~~~~~~~~~s~~~~l~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~a~~~~~~~~~~-~-~~~~-~~~~~~~~~~g~~~l~ 209 (424)
T 2b9w_A 135 NKVHEDLMLPFDEFLALNGCEA-ARDLWINPFTAFGYG-HFDNVPAAYVLKYLDFV-T-MMSF-AKGDLWTWADGTQAMF 209 (424)
T ss_dssp SCCCGGGGSBHHHHHHHTTCGG-GHHHHTTTTCCCCCC-CTTTSBHHHHHHHSCHH-H-HHHH-HHTCCBCCTTCHHHHH
T ss_pred hhhhhhhccCHHHHHHhhCcHH-HHHHHHHHHHhhccC-ChHhcCHHHHHHhhhHh-h-hhcc-cCCceEEeCChHHHHH
Confidence 0 01123578999999887754 33322 211111111 11122322222111110 0 1111 1112347789999999
Q ss_pred HHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEeCCCC
Q 014768 236 QAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSY 287 (419)
Q Consensus 236 ~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~~g~~i~ad~VV~~~~~ 287 (419)
++|.+.+ +.+|++|++|++|..+ ++++. |+++++++.||+||++++.
T Consensus 210 ~~l~~~l---~~~v~~~~~V~~i~~~-~~~v~-v~~~~g~~~ad~Vv~a~~~ 256 (424)
T 2b9w_A 210 EHLNATL---EHPAERNVDITRITRE-DGKVH-IHTTDWDRESDVLVLTVPL 256 (424)
T ss_dssp HHHHHHS---SSCCBCSCCEEEEECC-TTCEE-EEESSCEEEESEEEECSCH
T ss_pred HHHHHhh---cceEEcCCEEEEEEEE-CCEEE-EEECCCeEEcCEEEECCCH
Confidence 9998665 6689999999999984 67765 7774345999999998754
No 19
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.79 E-value=6.9e-19 Score=174.19 Aligned_cols=236 Identities=14% Similarity=0.156 Sum_probs=128.6
Q ss_pred CcceEEEECCCchHHHHhhccccCC-CeEEEeccCCCCCCcccccchHHHHHhhcCCCCCCCCCCCCcceEEccCcceee
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDG-LKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFII 81 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G-~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~gp~~~~ 81 (419)
+.+||||||||++||+||++|+++| ++|+|||+++++||+++|.... .++.+|+|++++.
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t~~~~-------------------~G~~~D~G~~~~~ 67 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQTVTGY-------------------QGRKYDIGASWHH 67 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCEEECG-------------------GGCEEESSCCEEC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceeeeecC-------------------CCcEEecCCeEEe
Confidence 3589999999999999999999999 9999999999999999987531 1689999999987
Q ss_pred cC--chhhHHHHhcCCcceeeEEEecceeEEeCCeEEEecCChhhhhccCCCChHhHHHHHHHHHHHhhcccCCCCcccc
Q 014768 82 AN--GALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEG 159 (419)
Q Consensus 82 ~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (419)
.. .++.+++.+.++... ...+.+.+|..+.++.. ...........+. .....+.++.........
T Consensus 68 ~~~~~~~~~~~~~lg~~~~------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----- 134 (516)
T 1rsg_A 68 DTLTNPLFLEEAQLSLNDG------RTRFVFDDDNFIYIDEE-RGRVDHDKELLLE-IVDNEMSKFAELEFHQHL----- 134 (516)
T ss_dssp CTTTCHHHHHHHHHHHHHC------CCCEECCCCCCEEEETT-TEECTTCTTTCHH-HHHHHHHHHHHHHC---------
T ss_pred cCCCChHHHHHHHhCCCCc------ceeEEECCCCEEEEcCC-CccccccHHHHHH-HHHHHHHHHHHHHhhhcc-----
Confidence 43 455665555444211 01112223332222211 1111000000011 111122222221111000
Q ss_pred ccCCcccHHHHHHHc------CCChhHHHHHHHHHh---hccCCCCCCCcHHHHHHHHHHHHHHhhhccCCCeEEEecCC
Q 014768 160 MDLTRVTTRELIAKY------GLDDNTIDFIGHALA---LHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYG 230 (419)
Q Consensus 160 ~~~~~~~~~~~~~~~------~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~gG 230 (419)
.....++.+++.++ .+.+....++...+. .+........+... .+....+ ...+++|
T Consensus 135 -~~~d~s~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~s~~~----------~~~~~~~--~~~~~~g- 200 (516)
T 1rsg_A 135 -GVSDCSFFQLVMKYLLQRRQFLTNDQIRYLPQLCRYLELWHGLDWKLLSAKD----------TYFGHQG--RNAFALN- 200 (516)
T ss_dssp ----CCBHHHHHHHHHHHHGGGSCHHHHHHHHHHHGGGHHHHTBCTTTSBHHH----------HCCCCSS--CCEEESC-
T ss_pred -CCCCCCHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHHHHhCCChHHCChHH----------HHhhccC--cchhhhC-
Confidence 12346677765432 122221222221111 11111111111110 0111212 2246777
Q ss_pred cCcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCC
Q 014768 231 LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSY 287 (419)
Q Consensus 231 ~~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~ 287 (419)
++.|+++|++.+. +++|++|++|++|..+ ++..+.|++ +|++++||+||++++.
T Consensus 201 ~~~l~~~l~~~l~--~~~i~~~~~V~~I~~~-~~~~v~v~~~~g~~~~ad~VI~t~p~ 255 (516)
T 1rsg_A 201 YDSVVQRIAQSFP--QNWLKLSCEVKSITRE-PSKNVTVNCEDGTVYNADYVIITVPQ 255 (516)
T ss_dssp HHHHHHHHHTTSC--GGGEETTCCEEEEEEC-TTSCEEEEETTSCEEEEEEEEECCCH
T ss_pred HHHHHHHHHHhCC--CCEEEECCEEEEEEEc-CCCeEEEEECCCcEEECCEEEECCCH
Confidence 8889888877654 3679999999999983 343356776 7888999999998853
No 20
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.78 E-value=2e-18 Score=167.11 Aligned_cols=247 Identities=17% Similarity=0.127 Sum_probs=138.7
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccccchHHHHHhhcCCCCCCCCCCCCcceEEccCcceeecC-
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIAN- 83 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~gp~~~~~~- 83 (419)
+||||||||++||+||+.|+++|++|+|||+++++||++.+.+.+ -..++.+|.|++++...
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~t~~~~-----------------cipg~~~~~g~~~~~~~~ 64 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAYSRESR-----------------NVPGLRVEIGGAYLHRKH 64 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCEEECS-----------------SSTTCEEESSCCCBCTTT
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeecceecc-----------------CCCCceEecCCeeeCCCC
Confidence 799999999999999999999999999999999999999876531 01157789999888654
Q ss_pred c-hhhHHHHhcCCcceeeEEEecceeE--EeCCeEEEe-cCChhhhhccCCCChHhHHHHHHHHHHHhhcccCCCCcccc
Q 014768 84 G-ALVRVLIHTDVTKYLYFKAVDGSFV--YNKGKVHKV-PATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEG 159 (419)
Q Consensus 84 ~-~~~~~l~~~~~~~~~~~~~~~~~~~--~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (419)
. .+.+.+.+.++.... ...+.... +.++..... +.. .... ..+ .....++......+....+.....
T Consensus 65 ~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~-~~~~~~l~~~~~~~~~~~~~~~~~ 135 (431)
T 3k7m_X 65 HPRLAAELDRYGIPTAA--ASEFTSFRHRLGPTAVDQAFPIP-GSEA-----VAV-EAATYTLLRDAHRIDLEKGLENQD 135 (431)
T ss_dssp CHHHHHHHHHHTCCEEE--CCCCCEECCBSCTTCCSSSSCCC-GGGH-----HHH-HHHHHHHHHHHTTCCTTTCTTSSS
T ss_pred cHHHHHHHHHhCCeeee--cCCCCcEEEEecCCeecCCCCCC-HHHH-----HHH-HHHHHHHHHHHHhcCCCCCccCcc
Confidence 3 344555555554211 11111111 112211110 000 0000 001 122333443333332111111111
Q ss_pred c-cCCcccHHHHHHHcCCChhHHHHHHHHHhhccCCCCCCCcHHHHHHHHHHHHHHhhh-ccCCCeEEEecCCcCcHHHH
Q 014768 160 M-DLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIAR-FQGGSPYIYPLYGLGELPQA 237 (419)
Q Consensus 160 ~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~p~gG~~~l~~a 237 (419)
. .++ .++.+++...+.++....++...............+....+..+...-..+.. ..+. .. .+.+|+..++++
T Consensus 136 ~~~~d-~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~g~~~l~~~ 212 (431)
T 3k7m_X 136 LEDLD-IPLNEYVDKLDLPPVSRQFLLAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLSL-DE-VFSNGSADLVDA 212 (431)
T ss_dssp CGGGC-SBHHHHHHHHTCCHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHTC-CE-EETTCTHHHHHH
T ss_pred hhhhc-CCHHHHHHhcCCCHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecch-hh-hcCCcHHHHHHH
Confidence 1 233 78889998887777766655433322222222122333322221111000000 1011 22 778999888887
Q ss_pred HHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCC
Q 014768 238 FARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPS 286 (419)
Q Consensus 238 l~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~ 286 (419)
+.+ +.| +|++|++|++|..+ +++++ |++ +|++++||+||++++
T Consensus 213 ~~~---~~g-~i~~~~~V~~i~~~-~~~v~-v~~~~g~~~~ad~vi~a~~ 256 (431)
T 3k7m_X 213 MSQ---EIP-EIRLQTVVTGIDQS-GDVVN-VTVKDGHAFQAHSVIVATP 256 (431)
T ss_dssp HHT---TCS-CEESSCCEEEEECS-SSSEE-EEETTSCCEEEEEEEECSC
T ss_pred HHh---hCC-ceEeCCEEEEEEEc-CCeEE-EEECCCCEEEeCEEEEecC
Confidence 764 447 99999999999974 66664 666 788899999999886
No 21
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.75 E-value=2e-17 Score=154.93 Aligned_cols=242 Identities=11% Similarity=0.171 Sum_probs=134.4
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccC-CCCCCcccccchHHHHHhhcCCCCCCCCCCCCcceEEccCcceee
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN-DYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFII 81 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~-~~~GG~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~gp~~~~ 81 (419)
..+||+|||||++||+||+.|+++|++|+|+|++ +.+||++.+..... + .+..+ ...++.+|.|++++.
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~-------~--~~~~~-~~~~~~~e~G~~~~~ 112 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKK-------G--EPSPF-ADPAQYAEAGAMRLP 112 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCT-------T--SCCSS-SSTTCCEESSCCCEE
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccc-------c--ccccc-cCCCcEEecCceeec
Confidence 4689999999999999999999999999999999 99999999875210 0 00000 023678899998886
Q ss_pred cCch-hhHHHHhcCCcceeeEEEe-----------------------------------------cceeEEeCCeEEEec
Q 014768 82 ANGA-LVRVLIHTDVTKYLYFKAV-----------------------------------------DGSFVYNKGKVHKVP 119 (419)
Q Consensus 82 ~~~~-~~~~l~~~~~~~~~~~~~~-----------------------------------------~~~~~~~~g~~~~~~ 119 (419)
.... +.+.+.+.++.....+..- ...+.+.+|......
T Consensus 113 ~~~~~~~~~~~~lGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~q~~r~~~~~~~~~~~g~~~~~~ 192 (376)
T 2e1m_A 113 SFHPLTLALIDKLGLKRRLFFNVDIDPQTGNQDAPVPPVFYKSFKDGKTWTNGAPSPEFKEPDKRNHTWIRTNREQVRRA 192 (376)
T ss_dssp TTCHHHHHHHHHTTCCEEEECSSCCCTTSSBCSSCCCCCEEECSSTTCEEESSCCCTTCBCCCCCCCSEEEETTEEEEHH
T ss_pred chHHHHHHHHHHcCCCcceeeccccccccccccccccccceeeeccceeEeccCCcccccccccCCCceEEECCceeccc
Confidence 6554 3444445677654321110 111233344433211
Q ss_pred C--Chhhhhc----c-------CCCChHhHHHHHHHHHHHhhcccC-------CC---Ccccc--ccCCcccHHHHHH-H
Q 014768 120 A--TDMEALK----S-------PLMGIFEKRRARKFFIYVQDYDEN-------DP---KTHEG--MDLTRVTTRELIA-K 173 (419)
Q Consensus 120 ~--~~~~~~~----~-------~~~~~~~~~~~~~~~~~~~~~~~~-------~~---~~~~~--~~~~~~~~~~~~~-~ 173 (419)
. .....+. - .+..++ .+.+.+|...+...... .+ ..+.. .+++..|+.+|++ .
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lD~~S~~~~L~~~ 271 (376)
T 2e1m_A 193 QYATDPSSINEGFHLTGCETRLTVSDMV-NQALEPVRDYYSVKQDDGTRVNKPFKEWLAGWADVVRDFDGYSMGRFLREY 271 (376)
T ss_dssp HHHHCTHHHHHHTTCCGGGGGSCHHHHH-HHHHHHHHHHHEEEETTTEEEECCHHHHHHHHHHHHHHHTTCBHHHHHHHT
T ss_pred ccccCHHHhccccCCchhhcccCHHHHH-HHHHHHHHHhhhhccccccccccccchhhccchHHHHHHhCCCHHHHHhhc
Confidence 0 0011110 0 000011 12233343333210000 00 00000 0346889999998 7
Q ss_pred cCCChhHHHHHHHHHhhccCCCCCCCcHHHHHHHHHHHHHHhhhccCCCeEEEecCCcCcHHHHHHHHHHHcCcEEEcCC
Q 014768 174 YGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNK 253 (419)
Q Consensus 174 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~gG~~~l~~al~~~~~~~G~~i~~~~ 253 (419)
.++++..++++..... ............+ .. ...+.....++.+.||++.|+++|++.+ +.+|++|+
T Consensus 272 ~g~s~~~~~~~~~~~~---~~~~~~~s~l~~l------~~-~~~~~~~~~~~~i~GG~~~l~~~l~~~l---~~~i~l~~ 338 (376)
T 2e1m_A 272 AEFSDEAVEAIGTIEN---MTSRLHLAFFHSF------LG-RSDIDPRATYWEIEGGSRMLPETLAKDL---RDQIVMGQ 338 (376)
T ss_dssp SCCCHHHHHHHHHHTT---CTTTTTSBHHHHH------HH-CSCSCTTCCEEEETTCTTHHHHHHHHHG---GGTEECSE
T ss_pred cCCCHHHHHHHHhhcC---ccccchhhHHHHH------HH-hhhhccCCceEEECCcHHHHHHHHHHhc---CCcEEecC
Confidence 8888887776543321 1111111222221 11 1122235568899999999999999876 56899999
Q ss_pred ccceEEEcCCCcEEEE
Q 014768 254 PECKVEFDEEGKVVGV 269 (419)
Q Consensus 254 ~V~~I~~~~~~~v~gV 269 (419)
+|++|..+ ++.+..+
T Consensus 339 ~V~~I~~~-~~gv~v~ 353 (376)
T 2e1m_A 339 RMVRLEYY-DPGRDGH 353 (376)
T ss_dssp EEEEEEEC-CCC----
T ss_pred eEEEEEEC-CCceEEE
Confidence 99999985 5544333
No 22
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.74 E-value=9.2e-20 Score=174.27 Aligned_cols=234 Identities=15% Similarity=0.134 Sum_probs=131.9
Q ss_pred CCCcceEEEECCCchHHHHhhccccC-CCeEEEeccCCCCCCcccccchHHHHHhhcCCCCCCCCCCCCcceEE-ccCcc
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVD-GLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNV-DMIPK 78 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~-G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~-d~gp~ 78 (419)
|++++||+|||||++||+||++|+++ |++|+|+|+++++||++++.... ..++.+ +.|++
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~~------------------~~g~~~~~~G~~ 65 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEP------------------QTGIEVHKYGAH 65 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEECT------------------TTCCEEETTSCC
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeecccc------------------CCCEEEEeCCCc
Confidence 44579999999999999999999999 99999999999999999987531 016777 48999
Q ss_pred eeecCch-hhHHHHhcCCcceeeEEEecceeEEeCCeEEEecCCh--hhhhccCCCChHhHHHHHHHHHHHhhcccCCCC
Q 014768 79 FIIANGA-LVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATD--MEALKSPLMGIFEKRRARKFFIYVQDYDENDPK 155 (419)
Q Consensus 79 ~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (419)
++....+ +.+.+.+.++... + ....+.+.+|+.+.+|.+. ...+..... .+..+.+++...... . .
T Consensus 66 ~~~~~~~~~~~~~~~~g~~~~--~--~~~~~~~~~G~~~~~p~~~~~~~~l~~~~~---~~~~~~~~l~~~~~~--~-~- 134 (399)
T 1v0j_A 66 LFHTSNKRVWDYVRQFTDFTD--Y--RHRVFAMHNGQAYQFPMGLGLVSQFFGKYF---TPEQARQLIAEQAAE--I-D- 134 (399)
T ss_dssp CEEESCHHHHHHHTTTCCBCC--C--CCCEEEEETTEEEEESSSHHHHHHHHTSCC---CHHHHHHHHHHHGGG--S-C-
T ss_pred EEcCCcHHHHHHHHHhhhhhc--c--ccceEEEECCEEEeCCCCHHHHHHHhcccC---CHHHHHHHHHHHhhc--c-C-
Confidence 9876543 4454444454211 1 1223445688888888542 112211111 123333232221111 0 0
Q ss_pred ccccccCCcccHHHHHHHcCCChhH-HHHHHHHH-hhccCCCCCCCcHHHHHHHHHHHHHHhhhccCCCeEE-EecCCcC
Q 014768 156 THEGMDLTRVTTRELIAKYGLDDNT-IDFIGHAL-ALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYI-YPLYGLG 232 (419)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~p~gG~~ 232 (419)
.....++.+|+.+. +...+ ..++.+.. ..+..+ ...-++... .++.........+ ....+. +|+||++
T Consensus 135 -----~~~~~s~~e~l~~~-~g~~~~~~~~~~~~~~~~~~~-~~~ls~~~~-~~~~~~~~~~~~~-~~~~~~~~p~gG~~ 205 (399)
T 1v0j_A 135 -----TADAQNLEEKAISL-IGRPLYEAFVKGYTAKQWQTD-PKELPAANI-TRLPVRYTFDNRY-FSDTYEGLPTDGYT 205 (399)
T ss_dssp -----TTC----CCHHHHH-HCHHHHHHHTHHHHHHHHTSC-GGGSCGGGC-SCCCCCSSSCCCS-CCCSEEECBTTHHH
T ss_pred -----CCCcccHHHHHHHH-HhHHHHHHHHHHHHHhhcCCC-hhhcChHhh-hcceeEeccccch-hhhhhcccccccHH
Confidence 01346677777653 33333 33333322 222211 101111100 0000000000011 122353 9999999
Q ss_pred cHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEeCCeEE-EcCEEEeCCC
Q 014768 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETA-KCKKVVCDPS 286 (419)
Q Consensus 233 ~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~~g~~i-~ad~VV~~~~ 286 (419)
+++++|++ +.|++|++|++|++|.. + | + ++ .||+||+++.
T Consensus 206 ~l~~~l~~---~~g~~I~l~~~V~~I~~-~------v--~--~~~~aD~VI~t~p 246 (399)
T 1v0j_A 206 AWLQNMAA---DHRIEVRLNTDWFDVRG-Q------L--R--PGSPAAPVVYTGP 246 (399)
T ss_dssp HHHHHHTC---STTEEEECSCCHHHHHH-H------H--T--TTSTTCCEEECSC
T ss_pred HHHHHHHh---cCCeEEEECCchhhhhh-h------h--h--hcccCCEEEECCc
Confidence 99999986 45899999999999864 1 2 1 45 7999999884
No 23
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.74 E-value=5.3e-17 Score=160.11 Aligned_cols=246 Identities=19% Similarity=0.246 Sum_probs=138.7
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccccchHHHHHhhcCCCCCCCCCCCCcceEEccCcceeec
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIA 82 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~gp~~~~~ 82 (419)
..+||+|||||++||+||..|+++|++|+|+|+++++||++.+.... ..++.+|+|++++..
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~~~~~~------------------~~~~~~~~g~~~~~~ 93 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVRTYRNE------------------EAGWYANLGPMRLPE 93 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCCEEEET------------------TTTEEEESSCCCEET
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCceeeeccC------------------CCCchhhcCcccccc
Confidence 35799999999999999999999999999999999999999876421 126889999998876
Q ss_pred CchhhH-HHHhcCCcceeeEEEec-ceeEEeCCeEEEecC--ChhhhhccCC------CC---hHhHHHHHHHHHHHhhc
Q 014768 83 NGALVR-VLIHTDVTKYLYFKAVD-GSFVYNKGKVHKVPA--TDMEALKSPL------MG---IFEKRRARKFFIYVQDY 149 (419)
Q Consensus 83 ~~~~~~-~l~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~--~~~~~~~~~~------~~---~~~~~~~~~~~~~~~~~ 149 (419)
....+. ++.+.++... .+...+ ..+.+.+|.....+. .....+...+ .. ++. ..+.++...+...
T Consensus 94 ~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 171 (498)
T 2iid_A 94 KHRIVREYIRKFDLRLN-EFSQENDNAWYFIKNIRKKVGEVKKDPGLLKYPVKPSEAGKSAGQLYE-ESLGKVVEELKRT 171 (498)
T ss_dssp TCHHHHHHHHHTTCCEE-EECSCCTTSEEEETTEEEEHHHHHHCGGGGCCCCCGGGTTCCHHHHHH-HHTHHHHHHHHHS
T ss_pred hHHHHHHHHHHhCCCce-eecccCCccEEEeCCeeecccccccCccccccCCCccccCCCHHHHHH-HHHHHHHHHHhhc
Confidence 554444 4444565421 121111 122333444332210 0001111000 00 000 1111222211111
Q ss_pred ccCCCCccccccCCcccHHHHHHHcC-CChhHHHHHHHHHhhccCCCCCCCcHHHHHHHHHHHHHHhhhccCCCeEEEec
Q 014768 150 DENDPKTHEGMDLTRVTTRELIAKYG-LDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPL 228 (419)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~ 228 (419)
.. ..... .+...++.+|+...+ ++......+...+.. ...+. ......+.. ...+.....+++++
T Consensus 172 ~~--~~~~~--~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~-------~~~~~~~~~~~~~~ 237 (498)
T 2iid_A 172 NC--SYILN--KYDTYSTKEYLIKEGDLSPGAVDMIGDLLNE--DSGYY-VSFIESLKH-------DDIFAYEKRFDEIV 237 (498)
T ss_dssp CH--HHHHH--HHTTSBHHHHHHHTSCCCHHHHHHHHHHTTC--GGGTT-SBHHHHHHH-------HHHHTTCCCEEEET
T ss_pred cH--HHHHH--HhhhhhHHHHHHHccCCCHHHHHHHHHhcCc--ccchh-HHHHHHHHH-------HhccccCcceEEeC
Confidence 00 00000 124567888888765 455544433322211 00011 111111111 01111234577999
Q ss_pred CCcCcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCe----EEEcCEEEeCCCC
Q 014768 229 YGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGE----TAKCKKVVCDPSY 287 (419)
Q Consensus 229 gG~~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~----~i~ad~VV~~~~~ 287 (419)
||++.|+++|++.+.. +|++|++|++|..+ ++++ .|++ +|+ +++||+||++.+.
T Consensus 238 gG~~~l~~~l~~~l~~---~i~~~~~V~~I~~~-~~~v-~v~~~~~~~~~~~~~ad~vI~t~p~ 296 (498)
T 2iid_A 238 DGMDKLPTAMYRDIQD---KVHFNAQVIKIQQN-DQKV-TVVYETLSKETPSVTADYVIVCTTS 296 (498)
T ss_dssp TCTTHHHHHHHHHTGG---GEESSCEEEEEEEC-SSCE-EEEEECSSSCCCEEEESEEEECSCH
T ss_pred CcHHHHHHHHHHhccc---ccccCCEEEEEEEC-CCeE-EEEEecCCcccceEEeCEEEECCCh
Confidence 9999999999987753 79999999999984 6665 4544 554 5899999998854
No 24
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.74 E-value=2.8e-17 Score=161.74 Aligned_cols=265 Identities=12% Similarity=0.069 Sum_probs=134.9
Q ss_pred CCcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccccchHHHHHhhcCCCCCCCCCCCCcceEEccCcceee
Q 014768 2 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFII 81 (419)
Q Consensus 2 ~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~gp~~~~ 81 (419)
++.+||+|||||++||+||+.|+++|++|+|||+++++||++++....+ .+...+..........++.+|.|++.+.
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 85 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWTARGGS---EETDLSGETQKCTFSEGHFYNVGATRIP 85 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEETTC---EEECTTSCEEECCCCTTCEEESSCCCEE
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceeeeccCc---ccccccchhhhhcccCCCcCCcchhhcc
Confidence 3568999999999999999999999999999999999999998875320 0000000000000113577899998887
Q ss_pred cCchhhHHHHhcCCcceeeEEEec-ceeEE-eC-----CeEEEecCChhhhhccCCCChHhHHHHHHHHHHHhhcccCCC
Q 014768 82 ANGALVRVLIHTDVTKYLYFKAVD-GSFVY-NK-----GKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDP 154 (419)
Q Consensus 82 ~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~-~~-----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (419)
....+.+.+.+.++... .+...+ ..+.+ .+ |..+.++.. ...+. . .+..++...........
T Consensus 86 ~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~-------~--~~~~l~~~~~~~~~~~~ 154 (489)
T 2jae_A 86 QSHITLDYCRELGVEIQ-GFGNQNANTFVNYQSDTSLSGQSVTYRAA-KADTF-------G--YMSELLKKATDQGALDQ 154 (489)
T ss_dssp TTSTHHHHHHHHTCCEE-EECCCCTTSEEECCCSSTTTTCCEEHHHH-HHHHH-------H--HHHHHHHHHHHHTTTTT
T ss_pred cHHHHHHHHHHcCCceE-EccccCCCceEEecCCcccCCccccHHHH-hhhhh-------c--cHHHHHHHHHhcccccc
Confidence 65566666666676521 111111 12333 33 444433211 00000 0 01111111111000000
Q ss_pred CccccccCCcccHHHHHHHcCCChhHHHHHHHHHhhccCC----CCCC----C-cHHHHHHH-HHHHHHHhhhccCCCeE
Q 014768 155 KTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDD----RYLN----E-PALDTVKR-MKLYAESIARFQGGSPY 224 (419)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~----~-~~~~~~~~-~~~~~~~~~~~~g~~~~ 224 (419)
. .. .....++.+|+++++-......+-......+... .... . ........ +..++...........+
T Consensus 155 ~-~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (489)
T 2jae_A 155 V-LS--REDKDALSEFLSDFGDLSDDGRYLGSSRRGYDSEPGAGLNFGTEKKPFAMQEVIRSGIGRNFSFDFGYDQAMMM 231 (489)
T ss_dssp T-SC--HHHHHHHHHHHHHHTTCCTTSCCCCCGGGCEEECCCBTTCCCEECCCCCHHHHHHHTTTTTGGGGGCTTTSSSE
T ss_pred c-cc--hhhHHHHHHHHHHhhhhhhccccccccchhhccCCCcccccCCCCCCcCHHHHhhhhHHHHHhhhhccccCccE
Confidence 0 00 0112355666654321000000000000000000 0000 0 11111000 00000000011123467
Q ss_pred EEecCCcCcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CC---eEEEcCEEEeCCCC
Q 014768 225 IYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EG---ETAKCKKVVCDPSY 287 (419)
Q Consensus 225 ~~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g---~~i~ad~VV~~~~~ 287 (419)
++++||++.|+++|++.+.+ ++|++|++|++|..+ ++++. |++ +| ++++||+||++...
T Consensus 232 ~~~~gG~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~-~~~v~-v~~~~g~~~~~~~ad~vI~a~p~ 294 (489)
T 2jae_A 232 FTPVGGMDRIYYAFQDRIGT--DNIVFGAEVTSMKNV-SEGVT-VEYTAGGSKKSITADYAICTIPP 294 (489)
T ss_dssp EEETTCTTHHHHHHHHHHCG--GGEETTCEEEEEEEE-TTEEE-EEEEETTEEEEEEESEEEECSCH
T ss_pred EeecCCHHHHHHHHHHhcCC--CeEEECCEEEEEEEc-CCeEE-EEEecCCeEEEEECCEEEECCCH
Confidence 89999999999999987732 789999999999984 77665 544 55 68999999998843
No 25
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.70 E-value=8e-17 Score=157.67 Aligned_cols=242 Identities=14% Similarity=0.145 Sum_probs=131.7
Q ss_pred CCCcceEEEECCCchHHHHhhccccCCC-eEEEeccCCCCCCcccccchHHHHHhhcCCCCCCCCCCCCcceEEccCcce
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKF 79 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G~-~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~gp~~ 79 (419)
|.+.+||+|||||++||++|+.|+++|+ +|+|+|+++.+||++++.... ++.+|+|+++
T Consensus 1 ~~~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~~--------------------~~~~d~g~~~ 60 (472)
T 1b37_A 1 ATVGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFA--------------------GINVELGANW 60 (472)
T ss_dssp ----CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEET--------------------TEEEESSCCE
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecccC--------------------CcEEeeCCeE
Confidence 3567899999999999999999999998 899999999999999987643 6899999999
Q ss_pred eec-----CchhhHHHHh-cCCcceeeEEEecc--eeEE-eCCeEEEecCChhhhhccCCCChHhHHHHHHHHHHHhhcc
Q 014768 80 IIA-----NGALVRVLIH-TDVTKYLYFKAVDG--SFVY-NKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYD 150 (419)
Q Consensus 80 ~~~-----~~~~~~~l~~-~~~~~~~~~~~~~~--~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (419)
+.. ..++.+++.+ .++.... ...+. .+.+ .+|..+..+ .... ..... ..+..+...+....
T Consensus 61 ~~~~~~~~~~~~~~~~~~~lgl~~~~--~~~~~~~~~~~~~~g~~~~~~-----~~~~-~~~~~--~~~~~~~~~~~~~~ 130 (472)
T 1b37_A 61 VEGVNGGKMNPIWPIVNSTLKLRNFR--SDFDYLAQNVYKEDGGVYDED-----YVQK-RIELA--DSVEEMGEKLSATL 130 (472)
T ss_dssp EEEESSSSCCTHHHHHHTTSCCCEEE--CCCTTGGGCEECSSSSBCCHH-----HHHH-HHHHH--HHHHHHHHHHHHTS
T ss_pred EeccCCCCCCHHHHHHHhhcCCceee--ccCccccceeEcCCCCCCCHH-----HHHH-HHHHH--HHHHHHHHHHHHhh
Confidence 872 2346666665 5665321 11111 1222 244332211 1100 00000 11222222221111
Q ss_pred cCCCCccccccCCcccHHH--HHHHcCC---ChhHHHHHHHHH-hhccCCCCCCCcHHHHHHHHHHHHHHhhhccCC-Ce
Q 014768 151 ENDPKTHEGMDLTRVTTRE--LIAKYGL---DDNTIDFIGHAL-ALHRDDRYLNEPALDTVKRMKLYAESIARFQGG-SP 223 (419)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~ 223 (419)
.+. .....++.+ ++..... ......++.... ................. .... +..+ +. .-
T Consensus 131 --~~~-----~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~-~~~~----~~~~-~~~~~ 197 (472)
T 1b37_A 131 --HAS-----GRDDMSILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEPPRVTSLQNTV-PLAT----FSDF-GDDVY 197 (472)
T ss_dssp --CTT-----CTTCCBHHHHHHHHHTSSSSCCSHHHHHHHHHHTHHHHSSCGGGBBSTTTS-SCHH----HHHH-CSEEE
T ss_pred --ccc-----cchhhhHHHHHHHhhhcccccccHHHHHHHHHHHhhhhcccccccchhhcc-cccc----cccc-CCcee
Confidence 000 112333332 3333221 111122222211 00000000000000000 0000 1112 21 12
Q ss_pred EEEecCCcCcHHHHHHHHHHHc--------CcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCC
Q 014768 224 YIYPLYGLGELPQAFARLSAVY--------GGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSY 287 (419)
Q Consensus 224 ~~~p~gG~~~l~~al~~~~~~~--------G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~ 287 (419)
+..++||++.++++|++.+.+. |++|+++++|++|..+ +++++ |++ +|++++||+||++.+.
T Consensus 198 ~~~~~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~-~~~v~-v~~~~g~~~~ad~vI~a~~~ 268 (472)
T 1b37_A 198 FVADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYS-PGGVT-VKTEDNSVYSADYVMVSASL 268 (472)
T ss_dssp EECCTTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEEC-SSCEE-EEETTSCEEEESEEEECSCH
T ss_pred eeecCCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEEc-CCcEE-EEECCCCEEEcCEEEEecCH
Confidence 3345899999999999887665 7899999999999984 77765 666 7889999999998754
No 26
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.70 E-value=1.8e-17 Score=157.38 Aligned_cols=228 Identities=13% Similarity=0.127 Sum_probs=133.0
Q ss_pred CCCcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccccchHHHHHhhcCCCCCCCCCCCCcceEE-ccCcce
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNV-DMIPKF 79 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~-d~gp~~ 79 (419)
|+ ++||+|||||++||++|+.|+++|++|+|+|+++.+||++++.... ..++.+ |.|+++
T Consensus 1 m~-~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~------------------~~g~~~~~~G~~~ 61 (384)
T 2bi7_A 1 MK-SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARDS------------------ETNVMVHVYGPHI 61 (384)
T ss_dssp -C-CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEECT------------------TTCCEEETTSCCC
T ss_pred CC-cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCcccccccc------------------CCCceEeeCCceE
Confidence 54 5899999999999999999999999999999999999999987531 125765 999999
Q ss_pred eecCch-hhHHHHhcCCcceeeEEEec-ceeEEeCCeEEEecCChhhhhccCCCChHhHHHHHHHHHHHhhcccCCCCcc
Q 014768 80 IIANGA-LVRVLIHTDVTKYLYFKAVD-GSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTH 157 (419)
Q Consensus 80 ~~~~~~-~~~~l~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (419)
+....+ +.+.+.+.+. +.+.. ..+.+.+|+.+.+|.+ ...+...+...+.+..+.+++...... .
T Consensus 62 ~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~g~~~~~P~~-~~~~~~l~~~~~~~~~~~~~l~~~~~~---~---- 128 (384)
T 2bi7_A 62 FHTDNETVWNYVNKHAE-----MMPYVNRVKATVNGQVFSLPIN-LHTINQFFSKTCSPDEARALIAEKGDS---T---- 128 (384)
T ss_dssp EEESCHHHHHHHHTTSC-----EEECCCCEEEEETTEEEEESCC-HHHHHHHTTCCCCHHHHHHHHHHHSCC---S----
T ss_pred ECCCCHHHHHHHHHHhh-----hcccccceEEEECCEEEECCCC-hhHHHHHhcccCCHHHHHHHHHHhhhc---c----
Confidence 986544 4444443442 12222 2234568888888865 333322111111223343343322211 0
Q ss_pred ccccCCcccHHHHHHHcCCChhH-HHHHHHHH-hhccCCCCCCCcHHHHHHHHHHHHHHhhhccCCCeEE-EecCCcCcH
Q 014768 158 EGMDLTRVTTRELIAKYGLDDNT-IDFIGHAL-ALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYI-YPLYGLGEL 234 (419)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~p~gG~~~l 234 (419)
.....++.+|+.+. +...+ ..++.+.. ..+..+ ..+.+... +.++.........+ ....+. +|+||++++
T Consensus 129 ---~~~~~sl~e~~~~~-~g~~~~~~~~~p~~~~~~~~~-~~~ls~~~-~~r~~~~~~~~~~~-~~~~~~~~p~gG~~~l 201 (384)
T 2bi7_A 129 ---IADPQTFEEEALRF-IGKELYEAFFKGYTIKQWGMQ-PSELPASI-LKRLPVRFNYDDNY-FNHKFQGMPKCGYTQM 201 (384)
T ss_dssp ---CSSCCBHHHHHHHH-HCHHHHHHHTHHHHHHHHSSC-GGGSBGGG-CCSCCCCSSSCCCS-CCCSEEEEETTHHHHH
T ss_pred ---CCCCcCHHHHHHHh-hcHHHHHHHHHHHHHHHhCCC-HHHhCHHH-Hhcccccccccccc-ccccccEEECcCHHHH
Confidence 12467888888765 33433 33333322 222211 10111100 00000000000011 122343 999999999
Q ss_pred HHHHHHHHHHcCcEEEcCCccc-eEEEcCCCcEEEEEeCCeEEEcCEEEeCCC
Q 014768 235 PQAFARLSAVYGGTYMLNKPEC-KVEFDEEGKVVGVTSEGETAKCKKVVCDPS 286 (419)
Q Consensus 235 ~~al~~~~~~~G~~i~~~~~V~-~I~~~~~~~v~gV~~~g~~i~ad~VV~~~~ 286 (419)
+++|++ ..|++|++|++|+ +|.. .||+||+++.
T Consensus 202 ~~~l~~---~~g~~I~l~~~V~~~i~~----------------~~d~VI~a~p 235 (384)
T 2bi7_A 202 IKSILN---HENIKVDLQREFIVEERT----------------HYDHVFYSGP 235 (384)
T ss_dssp HHHHHC---STTEEEEESCCCCGGGGG----------------GSSEEEECSC
T ss_pred HHHHHh---cCCCEEEECCeeehhhhc----------------cCCEEEEcCC
Confidence 999986 4589999999999 8752 1899999884
No 27
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=99.69 E-value=2.2e-17 Score=155.97 Aligned_cols=288 Identities=14% Similarity=0.133 Sum_probs=157.7
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccccchHHHHHhhcCCCCCCCCCCCCcceEE-ccCcceee
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNV-DMIPKFII 81 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~-d~gp~~~~ 81 (419)
..+||+|||||++||+||+.|+++|++|+|+|+++.+||++.+.... .++.+ |.|++++.
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~-------------------~G~~~~~~G~~~~~ 88 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDD-------------------AGVLIHPYGPHIFH 88 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECT-------------------TSCEECTTSCCCCE
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeecc-------------------CCceEeecCCcccC
Confidence 46899999999999999999999999999999999999999976410 15664 99999998
Q ss_pred cCch-hhHHHHhcCCcceeeEEE-ecceeEEeCCeEEEecCChhhhhccCCCC-hHhHHHHHHHHHHHhhcccCCCCccc
Q 014768 82 ANGA-LVRVLIHTDVTKYLYFKA-VDGSFVYNKGKVHKVPATDMEALKSPLMG-IFEKRRARKFFIYVQDYDENDPKTHE 158 (419)
Q Consensus 82 ~~~~-~~~~l~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (419)
.... +.+.+.+.+. +.. ....+.+.+|+.+.+|.+ ...+.. +.. .+..+....++.. ... +
T Consensus 89 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~l~~lP~~-~~~~~~-l~~~~~~~~~~~~~l~~-~~~----~---- 152 (397)
T 3hdq_A 89 TNSKDVFEYLSRFTE-----WRPYQHRVLASVDGQLLPIPIN-LDTVNR-LYGLNLTSFQVEEFFAS-VAE----K---- 152 (397)
T ss_dssp ESCHHHHHHHHTSCC-----EEECCCBEEEEETTEEEEESCC-HHHHHH-HHTCCCCHHHHHHHHHH-HCC----C----
T ss_pred CChHHHHHHHHHhhh-----cccccccceEEECCEEEEcCCC-hHHHHH-hhccCCCHHHHHHHHhh-ccc----C----
Confidence 6544 4444443332 222 123345678999999865 322211 100 0122333333331 111 0
Q ss_pred cccCCcccHHHHHHHcCCChhHHHHHHHHH-hhccCCCCCCCcHHHHHHHHHHHHHHhhhcc---CCCeE-EEecCCcCc
Q 014768 159 GMDLTRVTTRELIAKYGLDDNTIDFIGHAL-ALHRDDRYLNEPALDTVKRMKLYAESIARFQ---GGSPY-IYPLYGLGE 233 (419)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~-~~p~gG~~~ 233 (419)
.....++.+|+.+..-......++.+.. ..+..+ ..+-++ ..+.++.. ...+. -...+ .+|+||+.+
T Consensus 153 --~~~~~s~~e~~~~~~G~~~~e~~~~py~~k~~~~~-~~~Lsa-~~~~Rvp~----~~~~d~~yf~~~~qg~P~gGy~~ 224 (397)
T 3hdq_A 153 --VEQVRTSEDVVVSKVGRDLYNKFFRGYTRKQWGLD-PSELDA-SVTARVPT----RTNRDNRYFADTYQAMPLHGYTR 224 (397)
T ss_dssp --CSSCCBHHHHHHHHHHHHHHHHHTHHHHHHHHSSC-GGGSBT-TTGGGSCC----CSSCCCBSCCCSEEEEETTCHHH
T ss_pred --CCCCcCHHHHHHHhcCHHHHHHHHHHHhCchhCCC-HHHHHH-HHHHhcCc----ccccCccchhhhheeccCCCHHH
Confidence 1246788888765421222233333322 222211 111111 11111100 00110 02234 379999999
Q ss_pred HHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCCCcccc-ccCee-EEEEE----EecC
Q 014768 234 LPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNKVR-KVGRV-ARAIA----IMSH 307 (419)
Q Consensus 234 l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~~g~~i~ad~VV~~~~~~~~~~~-~~~~~-~~~~~----~~~~ 307 (419)
++++|++ ..|++|++|++|+++ +..+.+|+||++... +.... ..+.+ .+... .++.
T Consensus 225 l~e~l~~---~~g~~V~l~~~v~~~--------------~~~~~~d~vI~T~P~-d~~~~~~~g~L~yrsl~~~~~~~~~ 286 (397)
T 3hdq_A 225 MFQNMLS---SPNIKVMLNTDYREI--------------ADFIPFQHMIYTGPV-DAFFDFCYGKLPYRSLEFRHETHDT 286 (397)
T ss_dssp HHHHHTC---STTEEEEESCCGGGT--------------TTTSCEEEEEECSCH-HHHTTTTTCCCCEEEEEEEEEEESS
T ss_pred HHHHHHh---ccCCEEEECCeEEec--------------cccccCCEEEEcCCH-HHHHHHhcCCCCCceEEEEEEEecc
Confidence 9998864 559999999999843 224568999998832 11110 01111 12221 1222
Q ss_pred -CCCCCCCCCeEEEEecCCcCCCCCcEEEEEeCCCccccCCCcEEEEEEeeccCC
Q 014768 308 -PIPNTNDSHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETD 361 (419)
Q Consensus 308 -~l~~~~~~~~~~i~~~~~~~~~~~~~~v~~~s~~~~~aP~G~~~l~~~~~~~~~ 361 (419)
.+. ...++.+++.. +.-.|...+..+.. |.++++|....+++.+
T Consensus 287 ~~~~-----~~~~vn~~d~~----p~tRi~e~k~~~~~-~~~~t~i~~Ey~~~~~ 331 (397)
T 3hdq_A 287 EQLL-----PTGTVNYPNDY----AYTRVSEFKHITGQ-RHHQTSVVYEYPRAEG 331 (397)
T ss_dssp SCSC-----SSSEEECSSSS----SCSEEEEHHHHHCC-CCSSEEEEEEEEESSS
T ss_pred ccCC-----CCeEEEeCCCC----cceEEEeecccCCC-CCCCEEEEEEECCCCC
Confidence 222 22366676433 33345555544322 4578888887777543
No 28
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.62 E-value=1.6e-16 Score=149.94 Aligned_cols=227 Identities=15% Similarity=0.149 Sum_probs=130.9
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccccchHHHHHhhcCCCCCCCCCCCCcceEEc-cCcceeec
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVD-MIPKFIIA 82 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~d-~gp~~~~~ 82 (419)
++||+|||||++||+||++|+++|++|+|+|+++.+||++.+.... ++.+| .|++++..
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~--------------------g~~~~~~G~~~~~~ 60 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDCE--------------------GIQIHKYGAHIFHT 60 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEEET--------------------TEEEETTSCCCEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeeccC--------------------CceeeccCCceecC
Confidence 3799999999999999999999999999999999999999987532 68885 99999987
Q ss_pred Cch-hhHHHHhcCCcceeeEEEecceeEEeCCeEEEecCChhhhhccCCCChHhHHHHHHHHHHHhhcccCCCCcccccc
Q 014768 83 NGA-LVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMD 161 (419)
Q Consensus 83 ~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (419)
..+ +.+.+.+.+.. ..+. .....+.+|+.+.+|.+ ...+...+... .+..+.+++...... .. .
T Consensus 61 ~~~~~~~~~~~l~~~--~~~~--~~~~~~~~g~~~~~p~~-~~~~~~l~~~~-~~~~~~~~l~~~~~~---~~------~ 125 (367)
T 1i8t_A 61 NDKYIWDYVNDLVEF--NRFT--NSPLAIYKDKLFNLPFN-MNTFHQMWGVK-DPQEAQNIINAQKKK---YG------D 125 (367)
T ss_dssp SCHHHHHHHHTTSCB--CCCC--CCCEEEETTEEEESSBS-HHHHHHHHCCC-CHHHHHHHHHHHTTT---TC------C
T ss_pred CCHHHHHHHHHhhhh--hhcc--ccceEEECCeEEEcCCC-HHHHHHHhccC-CHHHHHHHHHHHhhc---cC------C
Confidence 643 33333333321 1111 11234557888888754 33322211110 223344444432221 10 0
Q ss_pred CCcccHHHHHHHcCCChhH-HHHHHHHH-hhccCCCCCCCcHHHHHHHHHHHHHHhhhccCCCeEE-EecCCcCcHHHHH
Q 014768 162 LTRVTTRELIAKYGLDDNT-IDFIGHAL-ALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYI-YPLYGLGELPQAF 238 (419)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~-~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~p~gG~~~l~~al 238 (419)
....++.+|+.+. +...+ ..++.+.. ..+..+ ..+.++... .++......-..+ ....+. +|+||+++++++|
T Consensus 126 ~~~~s~~~~~~~~-~g~~~~~~~~~p~~~~~~~~~-~~~lsa~~~-~~l~~~~~~~~~~-~~~~~~~~p~gG~~~l~~~l 201 (367)
T 1i8t_A 126 KVPENLEEQAISL-VGEDLYQALIKGYTEKQWGRS-AKELPAFII-KRIPVRFTFDNNY-FSDRYQGIPVGGYTKLIEKM 201 (367)
T ss_dssp CCCCSHHHHHHHH-HHHHHHHHHTHHHHHHHHSSC-GGGSCTTSS-CCCCBCSSSCCCS-CCCSEEECBTTCHHHHHHHH
T ss_pred CCCccHHHHHHHH-HhHHHHHHHHHHHHhhhhCCC-hHHcCHHHH-hhceeeecccccc-ccchhhcccCCCHHHHHHHH
Confidence 1456888888765 33333 23333322 222211 111111000 0000000000001 122343 9999999999999
Q ss_pred HHHHHHcCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEeCCC
Q 014768 239 ARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPS 286 (419)
Q Consensus 239 ~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~~g~~i~ad~VV~~~~ 286 (419)
++ |++|++|++|++|.. . | .+.||+||++++
T Consensus 202 ~~-----g~~i~l~~~V~~i~~--~-----v-----~~~~D~VV~a~p 232 (367)
T 1i8t_A 202 LE-----GVDVKLGIDFLKDKD--S-----L-----ASKAHRIIYTGP 232 (367)
T ss_dssp HT-----TSEEECSCCGGGSHH--H-----H-----HTTEEEEEECSC
T ss_pred hc-----CCEEEeCCceeeech--h-----h-----hccCCEEEEecc
Confidence 86 689999999998852 1 1 246899999884
No 29
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.51 E-value=1.8e-13 Score=140.07 Aligned_cols=74 Identities=18% Similarity=0.229 Sum_probs=59.5
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccccchHHHHHhhcCCCCCCCCCCCCcceEEccCcceeec-
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIA- 82 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~gp~~~~~- 82 (419)
.+||+|||||++||+||..|+++|++|+|+|+++.+||++++.... .++.+|+|++++..
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ggri~T~~~~-------------------~G~~vd~Ga~~i~G~ 396 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGGRVWDDKSF-------------------KGVTVGRGAQIVNGC 396 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTTCCEECCS-------------------TTCCEESSCCEEECC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceeceeeecccc-------------------CCeEeccCCeEEeCC
Confidence 4799999999999999999999999999999999999999987521 26788999988853
Q ss_pred -CchhhHHHHhcCCc
Q 014768 83 -NGALVRVLIHTDVT 96 (419)
Q Consensus 83 -~~~~~~~l~~~~~~ 96 (419)
..++..++.+.++.
T Consensus 397 ~~np~~~l~~~lGl~ 411 (776)
T 4gut_A 397 INNPVALMCEQLGIS 411 (776)
T ss_dssp TTCHHHHHHHHHTCC
T ss_pred ccChHHHHHHHhCCc
Confidence 23444544555654
No 30
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.50 E-value=7.1e-14 Score=131.98 Aligned_cols=58 Identities=10% Similarity=0.085 Sum_probs=47.8
Q ss_pred cCcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CC--eEEEcCEEEeCCCCCC
Q 014768 231 LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EG--ETAKCKKVVCDPSYLP 289 (419)
Q Consensus 231 ~~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g--~~i~ad~VV~~~~~~~ 289 (419)
...+.++|.+.+++.|++|+++++|++|+.+ +++.+.|++ +| .+++||.||.+++.+.
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s 209 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVR-PEGGFELDFGGAEPMTLSCRVLINAAGLHA 209 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEC-TTSSEEEEECTTSCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEc-CCceEEEEECCCceeEEEeCEEEECCCcch
Confidence 3578999999999999999999999999984 555345666 56 4899999999887763
No 31
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.47 E-value=5.3e-13 Score=129.23 Aligned_cols=66 Identities=17% Similarity=0.178 Sum_probs=55.2
Q ss_pred eEEEecC-C---cCcHHHHHHHHHHHcCcEEEcCC---ccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 014768 223 PYIYPLY-G---LGELPQAFARLSAVYGGTYMLNK---PECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 223 ~~~~p~g-G---~~~l~~al~~~~~~~G~~i~~~~---~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~~ 289 (419)
+++.+.+ | ...++++|.+.++++|++|++++ +|++|.. +++++++|++ +|++++||.||++++.+.
T Consensus 148 g~~~~~~~g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~-~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s 221 (438)
T 3dje_A 148 GYFARSGAGWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIF-ENNDVKGAVTADGKIWRAERTFLCAGASA 221 (438)
T ss_dssp EEEESSSCEEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEE-ETTEEEEEEETTTEEEECSEEEECCGGGG
T ss_pred EEEeCCCCEEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEe-cCCeEEEEEECCCCEEECCEEEECCCCCh
Confidence 4455555 4 45799999999999999999999 9999998 4888988988 777999999998876653
No 32
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.44 E-value=3e-12 Score=131.95 Aligned_cols=60 Identities=20% Similarity=0.319 Sum_probs=54.1
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccccchHHHHHhhcCCCCCCCCCCCCcceEEccCcceeecC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIAN 83 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~gp~~~~~~ 83 (419)
.+||+|||||++||+||+.|+++|++|+|||+++.+||++.++... ++.+|+|++++...
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~--------------------~~~~~~G~~~~~~~ 337 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRKG--------------------NYVADLGAMVVTGL 337 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCEEEET--------------------TEEEESSCCEECCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCceeeeccc--------------------ccchhcCceEecCC
Confidence 4799999999999999999999999999999999999999887632 68999999988653
No 33
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.44 E-value=1.4e-12 Score=123.59 Aligned_cols=64 Identities=14% Similarity=0.090 Sum_probs=51.8
Q ss_pred EEEecCC---cCcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCCC
Q 014768 224 YIYPLYG---LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 224 ~~~p~gG---~~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~~g~~i~ad~VV~~~~~~~ 289 (419)
.+++.+| ...++++|.+.++++|++|+++++|++|..+ +++ ++|++++.++.||.||.+++.+.
T Consensus 143 ~~~~~~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~-~~~-~~V~t~~g~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 143 TYDPTGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRV-DGA-WEVRCDAGSYRAAVLVNAAGAWC 209 (381)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEE-TTE-EEEECSSEEEEESEEEECCGGGH
T ss_pred EEcCCCceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEe-CCe-EEEEeCCCEEEcCEEEECCChhH
Confidence 4455555 3679999999999999999999999999984 665 67888555899999999887663
No 34
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.44 E-value=1.9e-12 Score=131.37 Aligned_cols=60 Identities=20% Similarity=0.319 Sum_probs=54.2
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccccchHHHHHhhcCCCCCCCCCCCCcceEEccCcceeecC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIAN 83 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~gp~~~~~~ 83 (419)
.+||+|||||++||+||..|+++|++|+|+|+++.+||++.++... ++.+|+|++++...
T Consensus 107 ~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~~~~~~--------------------~~~~~~G~~~~~~~ 166 (662)
T 2z3y_A 107 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFRKG--------------------NYVADLGAMVVTGL 166 (662)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCCEEEET--------------------TEEEESSCCEECCS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCcccccccc--------------------CchhhcCcEEEeCC
Confidence 4799999999999999999999999999999999999999987632 68899999988653
No 35
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.40 E-value=2.8e-13 Score=135.94 Aligned_cols=80 Identities=14% Similarity=0.084 Sum_probs=60.7
Q ss_pred cceEEEECCCchHHHHhhccccCC--------CeEEEeccCC-CC----------------CCcccccchHHHHHhhcCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDG--------LKVLHMDRND-YY----------------GGESSSLNLIQLWKRFRGN 58 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G--------~~V~vlE~~~-~~----------------GG~~~t~~~~~~~~~~~~~ 58 (419)
..+|+|||||++||+||+.|+++| ++|+|+|+++ ++ ||++.+.... +
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~~~~~~g~~~~~~~g~~GGr~~t~~~~--------~ 127 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSFLHDRPGIKAIKVRGLKAGRVSAALVH--------N 127 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBGGGCC----CEECTTCEETTEEEEEEC--------S
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCcccccccchhhHHHhcCcCCceEEEEEcc--------C
Confidence 468999999999999999999999 9999999999 99 9999887531 0
Q ss_pred CCCCCCCCCCcceEEccCcceeecCch-hhHHHHhc-CCc
Q 014768 59 EQPPAHLGSSRDYNVDMIPKFIIANGA-LVRVLIHT-DVT 96 (419)
Q Consensus 59 ~~~~~~~g~~~~~~~d~gp~~~~~~~~-~~~~l~~~-~~~ 96 (419)
+ .+ ...++.+|+|++++..... +.+.+.+. ++.
T Consensus 128 ~-~~----~~~~~~~e~G~~~~~~~~~~~~~~~~~l~gl~ 162 (721)
T 3ayj_A 128 G-DP----ASGDTIYEVGAMRFPEIAGLTWHYASAAFGDA 162 (721)
T ss_dssp S-CG----GGCSEEEECSCCCEETTCHHHHHHHHHHHCTT
T ss_pred C-cc----cCCCcEEecCCEEecCccHHHHHHHHHhcCCc
Confidence 0 00 0025889999998876543 44555555 665
No 36
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.39 E-value=6.7e-12 Score=127.98 Aligned_cols=65 Identities=15% Similarity=0.032 Sum_probs=53.0
Q ss_pred eEEEecCC---cCcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 014768 223 PYIYPLYG---LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 223 ~~~~p~gG---~~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~~ 289 (419)
+.++|.+| ...++++|.+.+++.|++|+++++|++|+.+ ++++ .|++ +|+++.||.||.+++.+.
T Consensus 405 g~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~-~~~v-~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 405 GITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRK-DDCW-LLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp EEEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECCGGGG
T ss_pred cEEecCCeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEe-CCeE-EEEECCCCEEECCEEEECCCcch
Confidence 45566665 3679999999999999999999999999984 6764 6777 778899999998876653
No 37
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.39 E-value=3.3e-12 Score=122.12 Aligned_cols=63 Identities=13% Similarity=0.037 Sum_probs=50.1
Q ss_pred EEEecCCcCcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCC
Q 014768 224 YIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYL 288 (419)
Q Consensus 224 ~~~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~~g~~i~ad~VV~~~~~~ 288 (419)
..+|......+.+.|.+.+++.|++|+++++|++|..+ ++. +.|++++++++||.||.+.+.+
T Consensus 124 ~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~-~~~-~~V~~~~g~i~ad~VIlAtG~~ 186 (417)
T 3v76_A 124 QLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERT-ASG-FRVTTSAGTVDAASLVVASGGK 186 (417)
T ss_dssp EEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEE-TTE-EEEEETTEEEEESEEEECCCCS
T ss_pred EEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEe-CCE-EEEEECCcEEEeeEEEECCCCc
Confidence 34565556789999999999999999999999999984 554 4677744489999999877654
No 38
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.38 E-value=2.6e-12 Score=120.14 Aligned_cols=58 Identities=12% Similarity=0.229 Sum_probs=48.0
Q ss_pred EEEecCCcCcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCC
Q 014768 224 YIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPS 286 (419)
Q Consensus 224 ~~~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~ 286 (419)
.+.+.+|+..++++|++.+ |++|+++++|++|..+ ++++. |++ +|+++.||.||++..
T Consensus 104 ~~~~~~g~~~l~~~l~~~~---g~~i~~~~~V~~i~~~-~~~~~-v~~~~g~~~~ad~vV~A~p 162 (342)
T 3qj4_A 104 NFVAPQGISSIIKHYLKES---GAEVYFRHRVTQINLR-DDKWE-VSKQTGSPEQFDLIVLTMP 162 (342)
T ss_dssp EEECTTCTTHHHHHHHHHH---TCEEESSCCEEEEEEC-SSSEE-EEESSSCCEEESEEEECSC
T ss_pred ceecCCCHHHHHHHHHHhc---CCEEEeCCEEEEEEEc-CCEEE-EEECCCCEEEcCEEEECCC
Confidence 3467899999999998766 8999999999999984 66654 555 777799999998764
No 39
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.35 E-value=8.3e-12 Score=118.47 Aligned_cols=65 Identities=20% Similarity=0.159 Sum_probs=53.0
Q ss_pred EEEecCC---cCcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCCC
Q 014768 224 YIYPLYG---LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 224 ~~~p~gG---~~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~~g~~i~ad~VV~~~~~~~ 289 (419)
.+.+..| ...+.++|.+.+++.|++|+++++|++|..+ ++++++|++++.+++||.||.+++.+.
T Consensus 138 ~~~~~~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~v~gv~~~~g~i~a~~VV~A~G~~s 205 (382)
T 1y56_B 138 SWNPTDGKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIE-NNEIKGVKTNKGIIKTGIVVNATNAWA 205 (382)
T ss_dssp EEETTCCEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTEEEECSEEEECCGGGH
T ss_pred EEcCCCeeECHHHHHHHHHHHHHHCCCEEECCceEEEEEEE-CCEEEEEEECCcEEECCEEEECcchhH
Confidence 3455555 3578899999999999999999999999984 788888888545899999998887653
No 40
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.33 E-value=1.7e-11 Score=127.80 Aligned_cols=65 Identities=20% Similarity=0.212 Sum_probs=53.5
Q ss_pred EEEecCC---cCcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCCC
Q 014768 224 YIYPLYG---LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 224 ~~~p~gG---~~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~~g~~i~ad~VV~~~~~~~ 289 (419)
.+.|.+| ...++++|.+.+++.|++|+++++|++|.. +++++++|.+++.+++||.||.+++.+.
T Consensus 140 ~~~~~~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~-~~~~v~~V~t~~G~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 140 LHVPSDGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQ-SGGRVTGVQTADGVIPADIVVSCAGFWG 207 (830)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEE-ETTEEEEEEETTEEEECSEEEECCGGGH
T ss_pred EEECCCceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEE-eCCEEEEEEECCcEEECCEEEECCccch
Confidence 4455554 247999999999999999999999999998 4788888888555899999999887663
No 41
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.32 E-value=1.2e-11 Score=117.81 Aligned_cols=63 Identities=14% Similarity=0.219 Sum_probs=48.0
Q ss_pred EecCCcCcHHHHHHHHHHHcCcEEEcCCccceEEEcC---CCcEEEEEeCCeEEEcCEEEeCCCCCC
Q 014768 226 YPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDE---EGKVVGVTSEGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 226 ~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~---~~~v~gV~~~g~~i~ad~VV~~~~~~~ 289 (419)
+|......+.+.|.+.+++.|++|+++++|++|..++ +++ +.|++++++++||.||.+++..+
T Consensus 103 ~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~g~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 103 FCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQVNSTQWQCKNLIVATGGLS 168 (401)
T ss_dssp EETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEETTEEEEESEEEECCCCSS
T ss_pred ccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEECCCEEECCEEEECCCCcc
Confidence 5544446788899999999999999999999998731 344 46667555899999998776543
No 42
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.31 E-value=2.3e-11 Score=124.21 Aligned_cols=66 Identities=15% Similarity=0.128 Sum_probs=52.3
Q ss_pred CeEEEecCC---cCcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCe-EEEcCEEEeCCCCCC
Q 014768 222 SPYIYPLYG---LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGE-TAKCKKVVCDPSYLP 289 (419)
Q Consensus 222 ~~~~~p~gG---~~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~-~i~ad~VV~~~~~~~ 289 (419)
.+.++|.+| ...++++|.+.+++.|++|+++++|++|+.+ ++++ .|++ +|+ ++.||.||.+++.+.
T Consensus 399 gg~~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~-~~~v-~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 399 DGIHYPAGGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRI-DSQW-QLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp CEEEETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEC-SSSE-EEEEC-CCCCEEESEEEECCGGGT
T ss_pred ceEEecCCeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEe-CCeE-EEEeCCCcEEEECCEEEECCCcch
Confidence 345566666 3679999999999999999999999999984 6664 6666 666 899999998876653
No 43
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.31 E-value=1.8e-11 Score=116.79 Aligned_cols=64 Identities=22% Similarity=0.180 Sum_probs=49.7
Q ss_pred eEEEecCC---cCcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCC
Q 014768 223 PYIYPLYG---LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYL 288 (419)
Q Consensus 223 ~~~~p~gG---~~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~~g~~i~ad~VV~~~~~~ 288 (419)
+.+.|.+| ...+.++|.+.+++.|++|+++++|++|+.+ ++++. |++++.+++||.||.+++.+
T Consensus 141 ~~~~~~~g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~-~~~v~-v~t~~g~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 141 GFLQPDGGTIDVRGTLAALFTLAQAAGATLRAGETVTELVPD-ADGVS-VTTDRGTYRAGKVVLACGPY 207 (397)
T ss_dssp EEEETTCEEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEE-TTEEE-EEESSCEEEEEEEEECCGGG
T ss_pred EEEcCCCCEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEc-CCeEE-EEECCCEEEcCEEEEcCCcC
Confidence 34455554 2468899999999999999999999999984 66553 66655589999999888665
No 44
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.31 E-value=2.3e-11 Score=119.84 Aligned_cols=56 Identities=18% Similarity=0.268 Sum_probs=46.5
Q ss_pred cHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe--CCe--EEEcC-EEEeCCCCC
Q 014768 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS--EGE--TAKCK-KVVCDPSYL 288 (419)
Q Consensus 233 ~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~--~g~--~i~ad-~VV~~~~~~ 288 (419)
.+.+.|.+.+++.|++|+++++|++|+.++++++++|.+ +++ +++|| .||.+++-+
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~ 263 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSF 263 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCCh
Confidence 799999999999999999999999999843689999887 443 58996 888766443
No 45
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.31 E-value=1.3e-12 Score=118.03 Aligned_cols=62 Identities=23% Similarity=0.286 Sum_probs=54.1
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccccchHHHHHhhcCCCCCCCCCCCCcceEEccCcceeecC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIAN 83 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~~~~~~~~~~~~~~~~~~~g~~~~~~~d~gp~~~~~~ 83 (419)
++||+|||||++||+||+.|+++|++|+||||++.+||++++.... +..+|.|.+.+...
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~~--------------------~~~~d~g~~~~~~~ 61 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSD--------------------AGALDMGAQYFTAR 61 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEET--------------------TEEEECSCCCBCCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccccC--------------------CceeecCccccccC
Confidence 4899999999999999999999999999999999999999877543 67888888777655
Q ss_pred ch
Q 014768 84 GA 85 (419)
Q Consensus 84 ~~ 85 (419)
..
T Consensus 62 ~~ 63 (336)
T 3kkj_A 62 DR 63 (336)
T ss_dssp SH
T ss_pred cH
Confidence 43
No 46
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.30 E-value=3.6e-11 Score=114.92 Aligned_cols=66 Identities=24% Similarity=0.181 Sum_probs=53.8
Q ss_pred eEEEecCCcC---cHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCCC
Q 014768 223 PYIYPLYGLG---ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 223 ~~~~p~gG~~---~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~~g~~i~ad~VV~~~~~~~ 289 (419)
+.+++.+|.- .+.++|.+.+++.|++++++++|++|..+ ++++++|+++++++.||.||.+++.+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~~~v~~~~g~~~a~~vV~a~G~~s 230 (405)
T 2gag_B 162 ATWQPRAGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKD-GEKVTGVKTTRGTIHAGKVALAGAGHS 230 (405)
T ss_dssp EEEETTCBBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTCCEEEEEEEECCGGGH
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEe-CCEEEEEEeCCceEECCEEEECCchhH
Confidence 4556666644 78999999999999999999999999984 788888888434899999998887653
No 47
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.26 E-value=1.4e-11 Score=119.31 Aligned_cols=63 Identities=19% Similarity=0.256 Sum_probs=51.7
Q ss_pred EEecCC-cCcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCC
Q 014768 225 IYPLYG-LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYL 288 (419)
Q Consensus 225 ~~p~gG-~~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~ 288 (419)
.+|..+ ...+.++|.+.+++.|++|+++++|++|..+ ++++++|++ +|++++||.||.+.+..
T Consensus 126 ~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~-~~~v~~V~~~~G~~i~Ad~VVlAtGg~ 190 (447)
T 2i0z_A 126 MFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYE-NGQTKAVILQTGEVLETNHVVIAVGGK 190 (447)
T ss_dssp EEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTCCEEECSCEEECCCCS
T ss_pred EECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEec-CCcEEEEEECCCCEEECCEEEECCCCC
Confidence 455433 4678899999999999999999999999984 788788888 67779999999776554
No 48
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.26 E-value=1.6e-11 Score=114.28 Aligned_cols=44 Identities=25% Similarity=0.362 Sum_probs=41.3
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccccc
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN 47 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t~~ 47 (419)
++||+|||||++||++|+.|+++|.+|+||||++.+||++.+..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~ 45 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKR 45 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEe
Confidence 46999999999999999999999999999999999999988764
No 49
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.23 E-value=4.6e-11 Score=112.86 Aligned_cols=64 Identities=14% Similarity=0.153 Sum_probs=49.3
Q ss_pred EEEecCC---cCcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCCC
Q 014768 224 YIYPLYG---LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 224 ~~~p~gG---~~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~~g~~i~ad~VV~~~~~~~ 289 (419)
.+.|..| ...++++|.+.+++.|++|+++++|++|..+ ++++ .|++++.+++||.||.+++.+.
T Consensus 138 ~~~~~~g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~~-~v~~~~g~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 138 LFETDSGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHD-DDGV-TIETADGEYQAKKAIVCAGTWV 204 (372)
T ss_dssp EEESSCEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEEC-SSSE-EEEESSCEEEEEEEEECCGGGG
T ss_pred EEeCCCcEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEc-CCEE-EEEECCCeEEcCEEEEcCCccH
Confidence 3445444 2578999999999999999999999999984 6654 5666444699999998887653
No 50
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.22 E-value=1.5e-11 Score=122.21 Aligned_cols=66 Identities=24% Similarity=0.245 Sum_probs=53.3
Q ss_pred eEEEecCC--cCcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-C---C--eEEEcCEEEeCCCCCC
Q 014768 223 PYIYPLYG--LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-E---G--ETAKCKKVVCDPSYLP 289 (419)
Q Consensus 223 ~~~~p~gG--~~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~---g--~~i~ad~VV~~~~~~~ 289 (419)
++.|+.+- ...++.+|++.++++|++|+++++|++|.. +++++++|++ + | .+++||.||.+++.+.
T Consensus 159 g~~~~dg~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~-~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 159 GGIYVEYRTDDARLTLEIMKEAVARGAVALNYMKVESFIY-DQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp EEEEEEEECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEE-ETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred EEEecCceEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEE-cCCeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 44555432 356899999999999999999999999999 4888888876 2 3 5799999999888764
No 51
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.20 E-value=9e-11 Score=111.54 Aligned_cols=56 Identities=9% Similarity=0.153 Sum_probs=46.9
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~~g~~i~ad~VV~~~~~~~ 289 (419)
..+.++|.+.+++.|++++++++|++|+.+ ++++ .|++++++++||.||.+++.+.
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~~-~v~~~~g~~~a~~vV~A~G~~~ 205 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDIS-PDSV-KIETANGSYTADKLIVSMGAWN 205 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEC-SSCE-EEEETTEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEec-CCeE-EEEeCCCEEEeCEEEEecCccH
Confidence 578999999999999999999999999984 5554 4667666899999998887653
No 52
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.20 E-value=1.1e-10 Score=113.18 Aligned_cols=65 Identities=14% Similarity=0.181 Sum_probs=51.3
Q ss_pred EEEecCC---cCcHHHHHHHHHHHcCcEEEcCCccceEEE---------------cCCCcEEEEEeCCeEE--EcCEEEe
Q 014768 224 YIYPLYG---LGELPQAFARLSAVYGGTYMLNKPECKVEF---------------DEEGKVVGVTSEGETA--KCKKVVC 283 (419)
Q Consensus 224 ~~~p~gG---~~~l~~al~~~~~~~G~~i~~~~~V~~I~~---------------~~~~~v~gV~~~g~~i--~ad~VV~ 283 (419)
.+.+..| ...+.++|.+.+++.|++|+++++|++|.. + ++++++|++++.++ .||.||.
T Consensus 170 ~~~~~~~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~-~~~v~~V~t~~g~i~~~Ad~VV~ 248 (448)
T 3axb_A 170 VLIRSAGFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQ-EARASAAVLSDGTRVEVGEKLVV 248 (448)
T ss_dssp EEESSEEECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTS-CEEEEEEEETTSCEEEEEEEEEE
T ss_pred EEeCCCeEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccC-CCceEEEEeCCCEEeecCCEEEE
Confidence 4445444 347899999999999999999999999987 4 66777888843378 9999998
Q ss_pred CCCCCC
Q 014768 284 DPSYLP 289 (419)
Q Consensus 284 ~~~~~~ 289 (419)
+++.+.
T Consensus 249 AtG~~s 254 (448)
T 3axb_A 249 AAGVWS 254 (448)
T ss_dssp CCGGGH
T ss_pred CCCcCH
Confidence 887653
No 53
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.19 E-value=1.2e-10 Score=116.26 Aligned_cols=62 Identities=21% Similarity=0.163 Sum_probs=49.6
Q ss_pred EecCC---cCcHHHHHHHHHHHcCcEEEcCCccceEEEcCC-CcEEEEEe---CCe--EEEcCEEEeCCCCC
Q 014768 226 YPLYG---LGELPQAFARLSAVYGGTYMLNKPECKVEFDEE-GKVVGVTS---EGE--TAKCKKVVCDPSYL 288 (419)
Q Consensus 226 ~p~gG---~~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~-~~v~gV~~---~g~--~i~ad~VV~~~~~~ 288 (419)
+|.+| ...+.+.|.+.+++.|++|+++++|++|+.+ + +++++|++ +|+ ++.||.||.+++-+
T Consensus 241 ~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~-~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~ 311 (566)
T 1qo8_A 241 RPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVN-DDHSVVGAVVHGKHTGYYMIGAKSVVLATGGY 311 (566)
T ss_dssp ECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEEC-TTSBEEEEEEEETTTEEEEEEEEEEEECCCCC
T ss_pred ecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEC-CCCcEEEEEEEeCCCcEEEEEcCEEEEecCCc
Confidence 45444 3568899999999999999999999999984 6 88888875 565 68999988766543
No 54
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.19 E-value=7.1e-10 Score=110.76 Aligned_cols=56 Identities=16% Similarity=0.102 Sum_probs=46.9
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCC-CcEEEEEe---CCe--EEEcCEEEeCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEE-GKVVGVTS---EGE--TAKCKKVVCDPSYL 288 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~-~~v~gV~~---~g~--~i~ad~VV~~~~~~ 288 (419)
..+.+.|.+.+++.|++|+++++|++|..+ + +++++|.+ +|+ ++.||.||.+++-+
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~-~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~ 316 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKD-DKGTVKGILVKGMYKGYYWVKADAVILATGGF 316 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC-TTSCEEEEEEEETTTEEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEc-CCCeEEEEEEEeCCCcEEEEECCeEEEeCCCc
Confidence 468899999999999999999999999985 5 88888765 565 68999998766543
No 55
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.18 E-value=1.4e-10 Score=109.96 Aligned_cols=65 Identities=12% Similarity=0.067 Sum_probs=52.4
Q ss_pred eEEEecCCc---CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCCC
Q 014768 223 PYIYPLYGL---GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 223 ~~~~p~gG~---~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~~g~~i~ad~VV~~~~~~~ 289 (419)
++++|.+|. ..+.++|.+.+++.|++++++++|++|..+ ++++ +|+++++++.||.||.+++.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~-~v~~~~g~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 152 ASFIQDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERD-GEAL-FIKTPSGDVWANHVVVASGVWS 219 (382)
T ss_dssp EEEETTCCBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECS-SSSE-EEEETTEEEEEEEEEECCGGGT
T ss_pred EEEeCCCeEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEE-CCEE-EEEcCCceEEcCEEEECCChhH
Confidence 455666663 568999999999999999999999999984 6776 7777555899999998887654
No 56
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.16 E-value=1.6e-10 Score=110.06 Aligned_cols=56 Identities=23% Similarity=0.323 Sum_probs=45.4
Q ss_pred cHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe----CCeEEEcCEEEeCCCCCC
Q 014768 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 233 ~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~----~g~~i~ad~VV~~~~~~~ 289 (419)
.+.+.|.+.+++.|++|+++++|++|..+ ++++++|++ ++.+++||.||.+.+...
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEe-CCEEEEEEEEECCeEEEEEcCEEEECCCcch
Confidence 45566777778889999999999999984 888887776 456899999998777653
No 57
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.13 E-value=2e-10 Score=114.42 Aligned_cols=57 Identities=18% Similarity=0.176 Sum_probs=48.0
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe----CCe--EEEcCEEEeCCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVCDPSYLP 289 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~----~g~--~i~ad~VV~~~~~~~ 289 (419)
..++.++++.++++|++|+++++|++|..+ ++++++|++ +|+ +++||.||.+++.+.
T Consensus 188 ~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~-~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 188 ARLVIDNIKKAAEDGAYLVSKMKAVGFLYE-GDQIVGVKARDLLTDEVIEIKAKLVINTSGPWV 250 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEBSCEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCeEEeccEEEEEEEe-CCEEEEEEEEEcCCCCEEEEEcCEEEECCChhH
Confidence 468888999999999999999999999984 788888874 343 799999999887763
No 58
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.09 E-value=1.3e-10 Score=114.16 Aligned_cols=57 Identities=21% Similarity=0.288 Sum_probs=49.8
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~~ 289 (419)
..+.+.|.+.+++.|++|+++++|++|.. +++++++|++ +|+++.||.||.+.+..+
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~-~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHM-EDGQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEE-SSSBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEE-eCCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 45778888888899999999999999998 4888888988 788899999998887765
No 59
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.06 E-value=7.5e-10 Score=106.34 Aligned_cols=56 Identities=13% Similarity=0.173 Sum_probs=42.4
Q ss_pred cHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCe--EEEcCEEEeCCCCC
Q 014768 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGE--TAKCKKVVCDPSYL 288 (419)
Q Consensus 233 ~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~--~i~ad~VV~~~~~~ 288 (419)
.+.+.|.+.+++.|++|+++++|++|..++++..+.|.+ +|+ +++||.||.+.+..
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~ 165 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYG 165 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCc
Confidence 456667777888899999999999999842333345555 676 69999999877654
No 60
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.03 E-value=2.5e-09 Score=106.66 Aligned_cols=56 Identities=23% Similarity=0.204 Sum_probs=46.1
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCC-CcEEEEEe---CCe--EEEcCEEEeCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEE-GKVVGVTS---EGE--TAKCKKVVCDPSYL 288 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~-~~v~gV~~---~g~--~i~ad~VV~~~~~~ 288 (419)
..+.+.|.+.+++.|++|+++++|++|+.+ + +++++|.+ +|+ ++.||.||.+++-+
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~-~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~ 316 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILED-ASGKVTGVLVKGEYTGYYVIKADAVVIAAGGF 316 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC---CCEEEEEEEETTTEEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEEC-CCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCC
Confidence 468899999999999999999999999984 6 88888875 464 68999998776543
No 61
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.01 E-value=2.8e-09 Score=106.24 Aligned_cols=57 Identities=18% Similarity=0.098 Sum_probs=45.4
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe--CC--eEEEcCEEEeCCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS--EG--ETAKCKKVVCDPSYLP 289 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~--~g--~~i~ad~VV~~~~~~~ 289 (419)
..+.+.|.+.+++.|++++.+++|++|..+ ++.+++|++ +| .+++||.||.+.+...
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDLS-DPDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEECC-STTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 356677788888899999999999999974 666677776 56 5899999998776543
No 62
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.01 E-value=2.3e-09 Score=107.05 Aligned_cols=56 Identities=20% Similarity=0.162 Sum_probs=45.8
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe----CCe--EEEcCEEEeCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVCDPSY 287 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~----~g~--~i~ad~VV~~~~~ 287 (419)
..+.++|.+.+++.|++|+++++|++|..++++++.+|.. +|+ ++.|+.||.+++-
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg 204 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGG 204 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCC
Confidence 5688999999999999999999999999832678888874 454 6899998876654
No 63
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.97 E-value=1.7e-09 Score=103.75 Aligned_cols=58 Identities=17% Similarity=0.173 Sum_probs=51.0
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCCc
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 290 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~~~ 290 (419)
..+.+.+.+.++++|++|+++++|++|.. +++++.+|++ +|+++.||.||++++..|.
T Consensus 194 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~ 252 (415)
T 3lxd_A 194 EALSEFYQAEHRAHGVDLRTGAAMDCIEG-DGTKVTGVRMQDGSVIPADIVIVGIGIVPC 252 (415)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEE-SSSBEEEEEESSSCEEECSEEEECSCCEES
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEe-cCCcEEEEEeCCCCEEEcCEEEECCCCccC
Confidence 46788888899999999999999999998 4788888988 8899999999998887653
No 64
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.95 E-value=5.5e-09 Score=104.55 Aligned_cols=55 Identities=18% Similarity=0.270 Sum_probs=46.1
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe----CCe--EEEcCEEEeCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVCDPSY 287 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~----~g~--~i~ad~VV~~~~~ 287 (419)
..+..+|.+.+.+.|++|+++++|++|..+ ++++.||.. +|+ ++.|+.||.+++-
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 215 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLME-NGECRGVIALCIEDGTIHRFRAKNTVIATGG 215 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEE-CCEEEEEEEEEcCCCcEEEEEcCeEEECCCc
Confidence 478999999999999999999999999984 888888865 454 6899998876644
No 65
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.90 E-value=4.1e-09 Score=103.86 Aligned_cols=56 Identities=23% Similarity=0.197 Sum_probs=45.6
Q ss_pred cHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe---CCe--EEEcCEEEeCCCCCC
Q 014768 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS---EGE--TAKCKKVVCDPSYLP 289 (419)
Q Consensus 233 ~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~---~g~--~i~ad~VV~~~~~~~ 289 (419)
.+.+.|.+.+++.|++|+++++|++|.. +++++.+|++ +|+ +++||.||.+.+...
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~-~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLF-EGERAVGVRYRNTEGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEE-ETTEEEEEEEECSSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEE-ECCEEEEEEEEeCCCCEEEEEcCEEEECCCcch
Confidence 5667778888889999999999999998 4888877765 463 899999998776653
No 66
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.88 E-value=6.1e-10 Score=105.83 Aligned_cols=41 Identities=29% Similarity=0.450 Sum_probs=37.6
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcc
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGES 43 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~ 43 (419)
++|||+|||||++||+||..|+++|++|+|+||++.+|...
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~ 43 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPV 43 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCC
Confidence 46999999999999999999999999999999998887543
No 67
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.83 E-value=7.7e-09 Score=98.75 Aligned_cols=59 Identities=22% Similarity=0.318 Sum_probs=51.0
Q ss_pred cCcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCCc
Q 014768 231 LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 290 (419)
Q Consensus 231 ~~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~~~ 290 (419)
...+.+.+.+.+++.|++++++++|++|..+ ++++.+|++ +|+++.||.||++++..|.
T Consensus 183 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~ 242 (404)
T 3fg2_P 183 TPEISSYFHDRHSGAGIRMHYGVRATEIAAE-GDRVTGVVLSDGNTLPCDLVVVGVGVIPN 242 (404)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTSCEEECSEEEECCCEEEC
T ss_pred CHHHHHHHHHHHHhCCcEEEECCEEEEEEec-CCcEEEEEeCCCCEEEcCEEEECcCCccC
Confidence 3567888889999999999999999999984 788888988 8889999999998877553
No 68
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.82 E-value=6.7e-09 Score=102.75 Aligned_cols=37 Identities=22% Similarity=0.384 Sum_probs=32.8
Q ss_pred CcceEEEECCCchHHHHhhcccc-CCCeEEEeccCCCC
Q 014768 3 EEYDVIVLGTGLKECILSGLLSV-DGLKVLHMDRNDYY 39 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~-~G~~V~vlE~~~~~ 39 (419)
.+||+||||||.+|+++|.+|++ .|++|+|||+.+..
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~ 53 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEP 53 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCC
Confidence 46999999999999999999997 67999999997543
No 69
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.80 E-value=1.6e-09 Score=100.27 Aligned_cols=42 Identities=26% Similarity=0.269 Sum_probs=38.7
Q ss_pred cceEEEECCCchHHHHhhccc--cCCCeEEEeccCCCCCCcccc
Q 014768 4 EYDVIVLGTGLKECILSGLLS--VDGLKVLHMDRNDYYGGESSS 45 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La--~~G~~V~vlE~~~~~GG~~~t 45 (419)
++||+|||||++||+||++|+ +.|++|+|+||++.+||.+..
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~ 108 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWL 108 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEe
Confidence 589999999999999999997 469999999999999998864
No 70
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.78 E-value=2.5e-09 Score=98.35 Aligned_cols=43 Identities=26% Similarity=0.481 Sum_probs=37.4
Q ss_pred CCC-cceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 1 MDE-EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 1 m~~-~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
|++ +|||+|||||++|++||.+|++.|++|+|+||+ .+||.|.
T Consensus 2 Mte~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~ 45 (312)
T 4gcm_A 2 MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMA 45 (312)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGG
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeee
Confidence 654 699999999999999999999999999999985 6788764
No 71
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.74 E-value=4e-09 Score=96.98 Aligned_cols=38 Identities=21% Similarity=0.228 Sum_probs=35.1
Q ss_pred CCCcceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
|.+.|||+|||||++|++||.+|+++|++|+|+|++..
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~ 38 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMA 38 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSG
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 77789999999999999999999999999999999764
No 72
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.74 E-value=3.7e-09 Score=96.89 Aligned_cols=41 Identities=20% Similarity=0.145 Sum_probs=35.4
Q ss_pred CCcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcc
Q 014768 2 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGES 43 (419)
Q Consensus 2 ~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~ 43 (419)
|++|||+|||||++||+||.+|+++|++|+|+|++. +||..
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg~~ 44 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRNRV 44 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGGGG
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCCee
Confidence 568999999999999999999999999999999975 55544
No 73
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=98.72 E-value=2.5e-08 Score=97.88 Aligned_cols=38 Identities=18% Similarity=0.344 Sum_probs=35.3
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCC
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~G 40 (419)
.++|+||||+|.+|+++|.+|++.|++|+|+|+++..+
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 46899999999999999999999999999999988655
No 74
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.72 E-value=1.9e-08 Score=97.50 Aligned_cols=56 Identities=7% Similarity=0.114 Sum_probs=46.5
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~~g~~i~ad~VV~~~~~~~ 289 (419)
..+.+.+.+.+++.|++|+++++|++|.. +++++ .|.++++++.||.||.+++..|
T Consensus 189 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v-~v~~~~g~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 189 KEMVAEVQKSLEKQAVIFHFEETVLGIEE-TANGI-VLETSEQEISCDSGIFALNLHP 244 (452)
T ss_dssp HHHHHHHHHHHHTTTEEEEETCCEEEEEE-CSSCE-EEEESSCEEEESEEEECSCCBC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEc-cCCeE-EEEECCCEEEeCEEEECcCCCC
Confidence 45788888999999999999999999997 46776 6777545899999998887655
No 75
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.71 E-value=1.7e-07 Score=91.22 Aligned_cols=57 Identities=19% Similarity=0.141 Sum_probs=47.6
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCCc
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 290 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~~~ 290 (419)
..+.+.+.+.+++.|++++++++|++|.. +++++. |.+ +|+++.||.||.+++..|.
T Consensus 202 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~~v~-v~~~~g~~i~aD~Vv~a~G~~p~ 259 (472)
T 3iwa_A 202 KSLSQMLRHDLEKNDVVVHTGEKVVRLEG-ENGKVA-RVITDKRTLDADLVILAAGVSPN 259 (472)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE-SSSBEE-EEEESSCEEECSEEEECSCEEEC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEc-cCCeEE-EEEeCCCEEEcCEEEECCCCCcC
Confidence 46788888999999999999999999997 477766 444 8889999999998877643
No 76
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=98.69 E-value=5e-08 Score=95.79 Aligned_cols=58 Identities=16% Similarity=0.126 Sum_probs=43.8
Q ss_pred cCcHHHHHHHHHHHcC-cEEEcCCccceEEEcCCC-cEEEEEe---CC-----eEEEcCEEEeCCCCC
Q 014768 231 LGELPQAFARLSAVYG-GTYMLNKPECKVEFDEEG-KVVGVTS---EG-----ETAKCKKVVCDPSYL 288 (419)
Q Consensus 231 ~~~l~~al~~~~~~~G-~~i~~~~~V~~I~~~~~~-~v~gV~~---~g-----~~i~ad~VV~~~~~~ 288 (419)
-.....++.+.+++.| ++|++++.|++|+.++++ ++++|+. +| .+++|+.||++++.+
T Consensus 225 R~s~~~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~ 292 (507)
T 1coy_A 225 KKSLDKTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSV 292 (507)
T ss_dssp BCCTTTTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHH
T ss_pred CcChHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCcc
Confidence 4455667777676665 999999999999995325 7999986 45 368899999887643
No 77
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.64 E-value=1.4e-08 Score=95.35 Aligned_cols=41 Identities=24% Similarity=0.260 Sum_probs=36.9
Q ss_pred CCCcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCC
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (419)
|++++||+|||||++|+++|+.|+++|++|+|+||+...+|
T Consensus 3 m~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g 43 (363)
T 1c0p_A 3 MHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDV 43 (363)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCc
Confidence 45679999999999999999999999999999999885554
No 78
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.64 E-value=7.3e-08 Score=95.55 Aligned_cols=35 Identities=23% Similarity=0.387 Sum_probs=32.4
Q ss_pred CcceEEEECCCchHHHHhhccccC-CCeEEEeccCC
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVD-GLKVLHMDRND 37 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~-G~~V~vlE~~~ 37 (419)
++||+||||||.+|+++|.+|++. |.+|+|||+.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 469999999999999999999974 79999999987
No 79
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.63 E-value=7.9e-09 Score=100.56 Aligned_cols=45 Identities=29% Similarity=0.324 Sum_probs=41.5
Q ss_pred CCCcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccc
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t 45 (419)
|++++||+|||||++|++||..|++.|++|+|+||++.+||.|..
T Consensus 1 M~~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~ 45 (466)
T 3l8k_A 1 MSLKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLY 45 (466)
T ss_dssp -CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHH
T ss_pred CCccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccc
Confidence 777899999999999999999999999999999999999998763
No 80
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=98.63 E-value=6.8e-08 Score=95.65 Aligned_cols=39 Identities=28% Similarity=0.400 Sum_probs=35.2
Q ss_pred CcceEEEECCCchHHHHhhccccC-CCeEEEeccCCCCCC
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVD-GLKVLHMDRNDYYGG 41 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~-G~~V~vlE~~~~~GG 41 (419)
.++|+||||+|.+|+++|.+|+++ |.+|+|||+.+...+
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~ 51 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRG 51 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCC
Confidence 469999999999999999999998 899999999876543
No 81
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.60 E-value=1.3e-08 Score=95.45 Aligned_cols=44 Identities=11% Similarity=0.212 Sum_probs=39.9
Q ss_pred CCCcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
|++.+||+|||||++|+++|..|+++|++|+|+|+++.+||.+.
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~ 54 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLA 54 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccc
Confidence 45678999999999999999999999999999999999999875
No 82
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.59 E-value=1.2e-08 Score=99.96 Aligned_cols=44 Identities=27% Similarity=0.444 Sum_probs=38.9
Q ss_pred CCcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccc
Q 014768 2 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (419)
Q Consensus 2 ~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t 45 (419)
++++||+|||||++|++||..|++.|++|+|+||++.+||.|..
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~ 66 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLN 66 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHH
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc
Confidence 34689999999999999999999999999999999999997653
No 83
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.58 E-value=1.6e-08 Score=93.89 Aligned_cols=44 Identities=20% Similarity=0.323 Sum_probs=40.1
Q ss_pred CCCcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
|++++||+|||||++|+++|..|+++|++|+|+|+++.+||.+.
T Consensus 2 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~ 45 (335)
T 2zbw_A 2 AADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLT 45 (335)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHH
T ss_pred CCCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeee
Confidence 34569999999999999999999999999999999999999774
No 84
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.58 E-value=2.4e-08 Score=95.50 Aligned_cols=41 Identities=20% Similarity=0.297 Sum_probs=36.0
Q ss_pred CCCcceEEEECCCchHHHHhhccccCCCe-EEEeccCCCCCC
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDGLK-VLHMDRNDYYGG 41 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G~~-V~vlE~~~~~GG 41 (419)
|++.+||+|||||++||++|..|+++|.+ |+|+||++.++.
T Consensus 1 M~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~ 42 (410)
T 3c96_A 1 MSEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRP 42 (410)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCC
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCccc
Confidence 77789999999999999999999999999 999999988754
No 85
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.55 E-value=3e-08 Score=91.31 Aligned_cols=44 Identities=20% Similarity=0.440 Sum_probs=38.6
Q ss_pred CCCcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccc
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t 45 (419)
|+.++||+|||||++|++||..|+++|++|+|+|+ ..+||.+..
T Consensus 13 m~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~ 56 (319)
T 3cty_A 13 KERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTAE 56 (319)
T ss_dssp -CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGGG
T ss_pred ccCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccccc
Confidence 55578999999999999999999999999999999 567887653
No 86
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.54 E-value=2.9e-08 Score=92.67 Aligned_cols=43 Identities=26% Similarity=0.364 Sum_probs=40.2
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccc
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t 45 (419)
+++||+|||||++|+++|..|+++|++|+|+|+++.+||.+..
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~ 44 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQH 44 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccC
Confidence 4689999999999999999999999999999999999998764
No 87
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.54 E-value=4.1e-08 Score=88.92 Aligned_cols=42 Identities=24% Similarity=0.299 Sum_probs=38.4
Q ss_pred CcceEEEECCCchHHHHhhccccC-CCeEEEeccCCCCCCccc
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVD-GLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~-G~~V~vlE~~~~~GG~~~ 44 (419)
.++||+|||||++||++|..|+++ |.+|+|+||++.+||.++
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~ 80 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAW 80 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTT
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCcee
Confidence 357999999999999999999997 999999999999987654
No 88
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.54 E-value=2.4e-08 Score=97.05 Aligned_cols=56 Identities=14% Similarity=0.093 Sum_probs=45.5
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEE-e-CCeEEEcCEEEeCCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVT-S-EGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~-~-~g~~i~ad~VV~~~~~~~ 289 (419)
..+.+.+.+.+++.|++|+++++|++|..+ +++...|+ + +|+ +.||.||.+++..|
T Consensus 211 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p 268 (463)
T 4dna_A 211 QDMRRGLHAAMEEKGIRILCEDIIQSVSAD-ADGRRVATTMKHGE-IVADQVMLALGRMP 268 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEC-TTSCEEEEESSSCE-EEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEc-CCCEEEEEEcCCCe-EEeCEEEEeeCccc
Confidence 457888889999999999999999999974 44445677 6 777 99999998876654
No 89
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.53 E-value=2.5e-08 Score=97.54 Aligned_cols=56 Identities=18% Similarity=0.199 Sum_probs=46.1
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~~ 289 (419)
..+.+.+.+.+++.|++++++++|++|..+ ++++ .|++ +|+++.||.||.+++..|
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~-~~~v-~v~~~~g~~i~aD~Vi~A~G~~p 288 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQST-ENCY-NVVLTNGQTICADRVMLATGRVP 288 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEC-SSSE-EEEETTSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEee-CCEE-EEEECCCcEEEcCEEEEeeCCCc
Confidence 357888888899999999999999999984 6665 5666 788999999998876543
No 90
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.53 E-value=5.1e-08 Score=92.81 Aligned_cols=41 Identities=20% Similarity=0.332 Sum_probs=37.2
Q ss_pred CCcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCc
Q 014768 2 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (419)
Q Consensus 2 ~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~ 42 (419)
++.+||+|||||++||++|..|+++|++|+|+||++.++.+
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~ 64 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREAR 64 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCcccc
Confidence 35689999999999999999999999999999999877654
No 91
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.52 E-value=5.9e-08 Score=93.89 Aligned_cols=44 Identities=16% Similarity=0.220 Sum_probs=40.5
Q ss_pred CCcceEEEECCCchHHHHhhccccCCC--eEEEeccCCCCCCcccc
Q 014768 2 DEEYDVIVLGTGLKECILSGLLSVDGL--KVLHMDRNDYYGGESSS 45 (419)
Q Consensus 2 ~~~~dvvIIGaGi~Gl~aA~~La~~G~--~V~vlE~~~~~GG~~~t 45 (419)
+..+||+|||||++||++|..|++.|. +|+|+|+++.+||.+..
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~ 49 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNY 49 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSC
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecC
Confidence 356899999999999999999999999 99999999999997754
No 92
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=98.51 E-value=2.8e-07 Score=91.93 Aligned_cols=37 Identities=30% Similarity=0.497 Sum_probs=34.1
Q ss_pred CcceEEEECCCchHHHHhhcccc-CCCeEEEeccCCCC
Q 014768 3 EEYDVIVLGTGLKECILSGLLSV-DGLKVLHMDRNDYY 39 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~-~G~~V~vlE~~~~~ 39 (419)
.++|+||||+|.+|+++|.+|++ .|.+|+|||+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 46999999999999999999999 89999999998654
No 93
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.50 E-value=4.3e-08 Score=90.02 Aligned_cols=41 Identities=22% Similarity=0.284 Sum_probs=38.1
Q ss_pred cceEEEECCCchHHHHhhccccC--CCeEEEeccCCCCCCccc
Q 014768 4 EYDVIVLGTGLKECILSGLLSVD--GLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~--G~~V~vlE~~~~~GG~~~ 44 (419)
++||+|||||++||++|+.|+++ |++|+|+|+++.+||.+.
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~ 121 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAW 121 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccc
Confidence 58999999999999999999997 999999999999988665
No 94
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.50 E-value=4.7e-08 Score=90.31 Aligned_cols=42 Identities=21% Similarity=0.381 Sum_probs=38.5
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccc
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t 45 (419)
..+||+|||||++|+++|..|+++|++|+|+|++ .+||.+..
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~ 48 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAW 48 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccccc
Confidence 4689999999999999999999999999999999 78887764
No 95
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.50 E-value=5.1e-08 Score=89.71 Aligned_cols=40 Identities=25% Similarity=0.316 Sum_probs=37.4
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccc
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t 45 (419)
.+||+|||||++||+||..|+++|++|+|+|++ +||.+..
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~ 54 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTE 54 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGG
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecc
Confidence 589999999999999999999999999999999 8888764
No 96
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.49 E-value=4.4e-08 Score=90.83 Aligned_cols=44 Identities=16% Similarity=0.188 Sum_probs=39.4
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccC----CCCCCccccc
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN----DYYGGESSSL 46 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~----~~~GG~~~t~ 46 (419)
+.+||+|||||++||++|..|+++|++|+|+|++ ..+||.+...
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~ 68 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTT 68 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccc
Confidence 4689999999999999999999999999999994 4889887643
No 97
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.49 E-value=5.4e-08 Score=95.49 Aligned_cols=57 Identities=14% Similarity=0.103 Sum_probs=47.6
Q ss_pred cCcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe----CCe--EEEcCEEEeCCCCCC
Q 014768 231 LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVCDPSYLP 289 (419)
Q Consensus 231 ~~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~----~g~--~i~ad~VV~~~~~~~ 289 (419)
...++.+|.+.++++|++|+++++|++|..+ + ++++|++ +|+ +++||.||.+++.+.
T Consensus 148 ~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~-~-~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 148 DARLVLANAQMVVRKGGEVLTRTRATSARRE-N-GLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSEEEEEEEEE-T-TEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEEEcCcEEEEEEEe-C-CEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 3578999999999999999999999999984 5 5677776 465 799999999887764
No 98
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.49 E-value=2.5e-08 Score=97.37 Aligned_cols=44 Identities=16% Similarity=0.329 Sum_probs=40.9
Q ss_pred CCCcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
|+.++||+|||||++|++||..|++.|++|+|+|+++.+||.|.
T Consensus 2 M~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 45 (478)
T 1v59_A 2 INKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCL 45 (478)
T ss_dssp EEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccc
Confidence 55679999999999999999999999999999999999999764
No 99
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.48 E-value=3.3e-08 Score=96.59 Aligned_cols=44 Identities=36% Similarity=0.471 Sum_probs=40.7
Q ss_pred CCCcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
|+.++||+|||||++|++||..|++.|++|+|+|+++.+||.|.
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 46 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCL 46 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCcee
Confidence 55679999999999999999999999999999999999998764
No 100
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.47 E-value=5.8e-08 Score=95.80 Aligned_cols=59 Identities=19% Similarity=0.155 Sum_probs=46.8
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcE--EEEEe-CCe-EEEcCEEEeCCCCCCc
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKV--VGVTS-EGE-TAKCKKVVCDPSYLPN 290 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v--~gV~~-~g~-~i~ad~VV~~~~~~~~ 290 (419)
..+.+.+.+.+++.|++|+++++|++|..++++++ ..|++ +|+ ++.||.||.+++..|.
T Consensus 255 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~ 317 (523)
T 1mo9_A 255 NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPR 317 (523)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEEC
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccC
Confidence 35778888999999999999999999987424544 34566 676 8999999998877654
No 101
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.47 E-value=3.8e-08 Score=95.42 Aligned_cols=55 Identities=24% Similarity=0.152 Sum_probs=43.6
Q ss_pred cHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe----CCe--EEEcCEEEeCCCCC
Q 014768 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVCDPSYL 288 (419)
Q Consensus 233 ~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~----~g~--~i~ad~VV~~~~~~ 288 (419)
.+.+.|.+.+++.|++++++++|++|..+ ++++++|++ +|+ +++||.||.+.+..
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~ 161 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFE-DGYVKGAVLFNRRTNEELTVYSKVVVEATGYS 161 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSEEEECCGGG
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEE-CCEEEEEEEEEcCCCceEEEEcCEEEECcCCc
Confidence 45566777777889999999999999984 788877665 565 79999999776543
No 102
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.47 E-value=3.9e-08 Score=90.96 Aligned_cols=41 Identities=20% Similarity=0.240 Sum_probs=39.0
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
.+||+|||||++||+||..|+++|++|+|+|+++.+||.+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~ 47 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLS 47 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeh
Confidence 47999999999999999999999999999999999999874
No 103
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.47 E-value=4.7e-08 Score=94.94 Aligned_cols=43 Identities=21% Similarity=0.385 Sum_probs=39.2
Q ss_pred CCCcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
|++++||+|||||++|++||..|++.|++|+|+|++ .+||.|.
T Consensus 1 M~~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~ 43 (463)
T 2r9z_A 1 MTQHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCV 43 (463)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHH
T ss_pred CCccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCc
Confidence 777899999999999999999999999999999998 6888764
No 104
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.47 E-value=5.4e-08 Score=94.67 Aligned_cols=57 Identities=14% Similarity=0.153 Sum_probs=46.2
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCCCc
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPN 290 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~~g~~i~ad~VV~~~~~~~~ 290 (419)
..+.+.+.+.+++.|++++++++|++|..+ ++ ...|.++++++.||.||.+++..|.
T Consensus 216 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~-~~~v~~~~~~i~aD~Vv~a~G~~p~ 272 (467)
T 1zk7_A 216 PAIGEAVTAAFRAEGIEVLEHTQASQVAHM-DG-EFVLTTTHGELRADKLLVATGRTPN 272 (467)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEEE-TT-EEEEEETTEEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEe-CC-EEEEEECCcEEEcCEEEECCCCCcC
Confidence 357888889999999999999999999863 44 4466777788999999988776543
No 105
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.46 E-value=6.8e-08 Score=92.21 Aligned_cols=38 Identities=16% Similarity=0.175 Sum_probs=34.5
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCC
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~G 40 (419)
+++||+|||||++||++|+.|+++|++|+|+||.+.++
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~ 59 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIK 59 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 46899999999999999999999999999999998764
No 106
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.46 E-value=5.2e-08 Score=94.31 Aligned_cols=56 Identities=9% Similarity=0.092 Sum_probs=44.8
Q ss_pred cHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 014768 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 233 ~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~~ 289 (419)
.+.+.+.+.+++.|++++++++|++|..+ ++....|++ +|+++.||.||.+++..|
T Consensus 209 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~~~~v~~~~g~~i~~D~vv~a~G~~p 265 (450)
T 1ges_A 209 MISETLVEVMNAEGPQLHTNAIPKAVVKN-TDGSLTLELEDGRSETVDCLIWAIGREP 265 (450)
T ss_dssp HHHHHHHHHHHHHSCEEECSCCEEEEEEC-TTSCEEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEe-CCcEEEEEECCCcEEEcCEEEECCCCCc
Confidence 47788888889999999999999999873 433345666 788999999998876554
No 107
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.45 E-value=7.1e-08 Score=95.03 Aligned_cols=44 Identities=25% Similarity=0.344 Sum_probs=39.3
Q ss_pred CCcceEEEECCCchHHHHhhccccCCCeEEEeccCC--------CCCCcccc
Q 014768 2 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND--------YYGGESSS 45 (419)
Q Consensus 2 ~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~--------~~GG~~~t 45 (419)
+.++||+|||||++|++||..|++.|++|+|+||++ .+||.|..
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~ 81 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVN 81 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCC
Confidence 346999999999999999999999999999999965 78997653
No 108
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.44 E-value=7.9e-08 Score=87.75 Aligned_cols=41 Identities=27% Similarity=0.318 Sum_probs=38.2
Q ss_pred cceEEEECCCchHHHHhhccccC--CCeEEEeccCCCCCCccc
Q 014768 4 EYDVIVLGTGLKECILSGLLSVD--GLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~--G~~V~vlE~~~~~GG~~~ 44 (419)
++||+|||||++||+||+.|+++ |++|+|+|+++.+||.++
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~ 107 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSW 107 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccccccc
Confidence 57999999999999999999998 999999999999998665
No 109
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.44 E-value=1e-07 Score=95.74 Aligned_cols=44 Identities=32% Similarity=0.495 Sum_probs=38.7
Q ss_pred CCCcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
|+..+||||||||++|++||..|+++|++|+|+|+.+..||.+.
T Consensus 43 ~~~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~~ 86 (623)
T 3pl8_A 43 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLKI 86 (623)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSST
T ss_pred ccccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCccc
Confidence 44579999999999999999999999999999999999998654
No 110
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.42 E-value=1.2e-07 Score=89.65 Aligned_cols=39 Identities=15% Similarity=0.099 Sum_probs=36.3
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCc
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~ 42 (419)
.+||+|||||++||++|..|+++|++|+|+||++.+++.
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~ 49 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAF 49 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCC
Confidence 589999999999999999999999999999999888653
No 111
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.42 E-value=7e-08 Score=94.47 Aligned_cols=40 Identities=23% Similarity=0.278 Sum_probs=37.0
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
++||+|||||++|++||..|++.|++|+|+|+++ +||.|.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~ 47 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCA 47 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCccc
Confidence 4899999999999999999999999999999975 888764
No 112
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.41 E-value=8.9e-08 Score=93.41 Aligned_cols=57 Identities=11% Similarity=0.133 Sum_probs=43.8
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEeCC---eEEEcCEEEeCCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEG---ETAKCKKVVCDPSYLP 289 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~~g---~~i~ad~VV~~~~~~~ 289 (419)
..+.+.+.+.+++.|++++++++|++|..+ ++++.....++ +++.+|.||.+++..|
T Consensus 221 ~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~-~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p 280 (476)
T 3lad_A 221 EQVAKEAQKILTKQGLKILLGARVTGTEVK-NKQVTVKFVDAEGEKSQAFDKLIVAVGRRP 280 (476)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCEEEEEEEC-SSCEEEEEESSSEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEEc-CCEEEEEEEeCCCcEEEECCEEEEeeCCcc
Confidence 457888888899999999999999999974 65554332343 6899999998876544
No 113
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.40 E-value=1e-07 Score=90.90 Aligned_cols=56 Identities=14% Similarity=0.137 Sum_probs=42.2
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccc---------eEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPEC---------KVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~---------~I~~~~~~~v~gV~~~g~~i~ad~VV~~~~~~~ 289 (419)
..+.++|.+.+++.|++++++++|+ +|..+ ++++ +|++++.+++||.||.+++.+.
T Consensus 172 ~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~-~~~v-~v~~~~g~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 172 GSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVT-NTHQ-IVVHETRQIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CBCCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEee-CCeE-EEEECCcEEECCEEEECCCccH
Confidence 5689999999999999999999999 88873 6666 7777555899999998887653
No 114
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.40 E-value=1.5e-07 Score=92.25 Aligned_cols=41 Identities=29% Similarity=0.453 Sum_probs=36.6
Q ss_pred CCCcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCC
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (419)
|++++||+|||||++||++|..|+++|.+|+|+||++.++.
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~ 48 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTG 48 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CC
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 35679999999999999999999999999999999987753
No 115
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.40 E-value=9e-08 Score=88.09 Aligned_cols=56 Identities=16% Similarity=0.035 Sum_probs=45.0
Q ss_pred cHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-C----C--eEEEcCEEEeCCCCCC
Q 014768 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-E----G--ETAKCKKVVCDPSYLP 289 (419)
Q Consensus 233 ~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~----g--~~i~ad~VV~~~~~~~ 289 (419)
.+.+.+.+.+++.|++++++++|++|..+ ++++.+|++ + | +++.||.||.++++.|
T Consensus 185 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p 247 (320)
T 1trb_A 185 ILIKRLMDKVENGNIILHTNRTLEEVTGD-QMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSP 247 (320)
T ss_dssp HHHHHHHHHHHTSSEEEECSCEEEEEEEC-SSSEEEEEEECCTTCCCCEEEECSEEEECSCEEE
T ss_pred HHHHHHHHhcccCCeEEEcCceeEEEEcC-CCceEEEEEEeccCCCceEEEEcCEEEEEeCCCC
Confidence 46667777888899999999999999974 667777776 3 4 5799999999887654
No 116
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.40 E-value=8.2e-08 Score=93.70 Aligned_cols=57 Identities=9% Similarity=-0.001 Sum_probs=44.8
Q ss_pred cHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CC-eEEEcCEEEeCCCCCC
Q 014768 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EG-ETAKCKKVVCDPSYLP 289 (419)
Q Consensus 233 ~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g-~~i~ad~VV~~~~~~~ 289 (419)
.+.+.+.+.+++.|++++++++|++|..++++++..|++ +| +++.||.||.+++..|
T Consensus 227 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p 285 (479)
T 2hqm_A 227 CIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKS 285 (479)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCC
Confidence 577788888899999999999999998732343456666 78 7899999998876654
No 117
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.39 E-value=9.2e-08 Score=93.07 Aligned_cols=41 Identities=27% Similarity=0.411 Sum_probs=39.0
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
++||+|||||++|++||..|++.|++|+|+|+++.+||.|.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~ 42 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCL 42 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCC
Confidence 58999999999999999999999999999999999999865
No 118
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.39 E-value=1.2e-07 Score=93.83 Aligned_cols=42 Identities=29% Similarity=0.275 Sum_probs=39.4
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
.++||+|||||++|+++|..|+++|++|+|+|+++.+||.+.
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~ 56 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWY 56 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc
Confidence 458999999999999999999999999999999999999774
No 119
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.39 E-value=1.4e-07 Score=93.26 Aligned_cols=40 Identities=20% Similarity=0.305 Sum_probs=34.6
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
++||||||||++||+||+.|++ |.+|+||||.+..||.+.
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~s~ 47 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGSTF 47 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC----
T ss_pred CCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCChh
Confidence 5899999999999999999999 999999999998876543
No 120
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.37 E-value=1.3e-07 Score=82.83 Aligned_cols=53 Identities=21% Similarity=0.185 Sum_probs=41.0
Q ss_pred HHHHHHHHHHc-CcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 014768 235 PQAFARLSAVY-GGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 235 ~~al~~~~~~~-G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~~ 289 (419)
.+.|.+.+++. |++++ +++|++|..+ ++++++|.+ +|++++||.||.+.+.+.
T Consensus 71 ~~~l~~~~~~~~gv~i~-~~~v~~i~~~-~~~v~~v~~~~g~~i~a~~VV~A~G~~s 125 (232)
T 2cul_A 71 HARAKYLLEGLRPLHLF-QATATGLLLE-GNRVVGVRTWEGPPARGEKVVLAVGSFL 125 (232)
T ss_dssp HHHHHHHHHTCTTEEEE-ECCEEEEEEE-TTEEEEEEETTSCCEECSEEEECCTTCS
T ss_pred HHHHHHHHHcCCCcEEE-EeEEEEEEEe-CCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 34455666666 88888 6799999984 788878887 777899999998877653
No 121
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.37 E-value=2.1e-07 Score=88.51 Aligned_cols=37 Identities=16% Similarity=0.163 Sum_probs=34.6
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCCCC
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (419)
..+||+|||||++||++|..|+++|++|+|+||++.+
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 40 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQP 40 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 4589999999999999999999999999999998764
No 122
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.37 E-value=1.2e-07 Score=86.99 Aligned_cols=42 Identities=24% Similarity=0.332 Sum_probs=38.4
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEE-eccCCCCCCcccc
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLH-MDRNDYYGGESSS 45 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~v-lE~~~~~GG~~~t 45 (419)
+.+||+|||||++||+||..|+++|++|+| +|| +.+||.+..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~ 45 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITS 45 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGG
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeee
Confidence 468999999999999999999999999999 999 778988753
No 123
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.36 E-value=1.3e-07 Score=92.01 Aligned_cols=43 Identities=21% Similarity=0.366 Sum_probs=40.0
Q ss_pred CCcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 2 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 2 ~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
+.++||+|||||++|++||..|++.|++|+|+|+++.+||.|.
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~ 46 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCL 46 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHH
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcccccc
Confidence 3568999999999999999999999999999999999999875
No 124
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.36 E-value=8.8e-08 Score=93.48 Aligned_cols=41 Identities=20% Similarity=0.299 Sum_probs=37.4
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
.++||+|||||++|++||..|++.|++|+|+|++ .+||.|.
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~ 59 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCV 59 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCccc
Confidence 4689999999999999999999999999999986 7888764
No 125
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.36 E-value=8.6e-08 Score=93.87 Aligned_cols=56 Identities=20% Similarity=0.232 Sum_probs=45.6
Q ss_pred cHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 014768 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 233 ~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~~ 289 (419)
.+.+.+.+.+++.|++|+++++|++|..+ +++...|++ +|+++.||.||.+++..|
T Consensus 236 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~~~~v~~~~G~~i~~D~vv~a~G~~p 292 (495)
T 2wpf_A 236 TIREEVTKQLTANGIEIMTNENPAKVSLN-TDGSKHVTFESGKTLDVDVVMMAIGRIP 292 (495)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEC-TTSCEEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCceEEEEECCCcEEEcCEEEECCCCcc
Confidence 57788888999999999999999999874 443345666 788999999998887654
No 126
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.36 E-value=1.2e-07 Score=95.52 Aligned_cols=55 Identities=16% Similarity=0.117 Sum_probs=45.6
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe----CCe--EEEcCEEEeCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVCDPSY 287 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~----~g~--~i~ad~VV~~~~~ 287 (419)
..+..+|.+.+.+.|++|+++++|++|..+ ++++.||.. +|+ .+.||.||.+++-
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 218 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQ-DGKCYGAVVRDLVTGDIIAYVAKGTLIATGG 218 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEec-CCEEEEEEEEECCCCcEEEEEcCEEEEccCc
Confidence 468999999999999999999999999984 888888764 455 4899998876543
No 127
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.35 E-value=1.7e-07 Score=91.71 Aligned_cols=42 Identities=24% Similarity=0.258 Sum_probs=38.4
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEecc--------CCCCCCccc
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDR--------NDYYGGESS 44 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~--------~~~~GG~~~ 44 (419)
.+|||+|||||++|++||..|++.|++|+|+|| ...+||.|.
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~ 54 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCV 54 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeec
Confidence 469999999999999999999999999999998 567899764
No 128
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.35 E-value=1.1e-07 Score=88.95 Aligned_cols=38 Identities=13% Similarity=0.001 Sum_probs=34.3
Q ss_pred ceEEEECCCchHHHHhhccccCC------CeEEEeccCCCCCCc
Q 014768 5 YDVIVLGTGLKECILSGLLSVDG------LKVLHMDRNDYYGGE 42 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G------~~V~vlE~~~~~GG~ 42 (419)
+||||||||++||++|+.|+++| .+|+|||++...+|.
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~~~~a 44 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFTPLTT 44 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCGGGSG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCCCCCc
Confidence 38999999999999999999998 999999999865553
No 129
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.35 E-value=1.7e-07 Score=88.13 Aligned_cols=41 Identities=17% Similarity=0.275 Sum_probs=37.8
Q ss_pred CcceEEEECCCchHHHHhhccccCCC-eEEEeccCCCCCCccc
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRNDYYGGESS 44 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~-~V~vlE~~~~~GG~~~ 44 (419)
+++||+|||||++|+++|..|++.|+ +|+|+|+++ +||.+.
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~ 44 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFK 44 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHH
T ss_pred ccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccc
Confidence 46899999999999999999999999 999999999 888654
No 130
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.34 E-value=2.9e-07 Score=91.19 Aligned_cols=41 Identities=32% Similarity=0.491 Sum_probs=36.9
Q ss_pred CC-CcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCC
Q 014768 1 MD-EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (419)
Q Consensus 1 m~-~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (419)
|+ .++||+|||||++||++|+.|+++|.+|+|+||++.++.
T Consensus 1 M~~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~ 42 (535)
T 3ihg_A 1 MNDHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSP 42 (535)
T ss_dssp CCCCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCC
T ss_pred CCCccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 54 468999999999999999999999999999999987653
No 131
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.34 E-value=1.7e-07 Score=86.99 Aligned_cols=43 Identities=23% Similarity=0.302 Sum_probs=38.1
Q ss_pred CCcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccc
Q 014768 2 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (419)
Q Consensus 2 ~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t 45 (419)
+..+||+|||||++|+++|..|+++|++|+|+|++ .+||.+..
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~ 54 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMT 54 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceec
Confidence 45689999999999999999999999999999986 77887643
No 132
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.34 E-value=1.7e-07 Score=92.68 Aligned_cols=43 Identities=26% Similarity=0.352 Sum_probs=39.8
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccc
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t 45 (419)
.++||||||||++|+++|..|++.|++|+|+|+++.+||.+..
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~ 62 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYW 62 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHH
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccc
Confidence 3589999999999999999999999999999999999997753
No 133
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.34 E-value=1.5e-07 Score=91.31 Aligned_cols=56 Identities=20% Similarity=0.107 Sum_probs=45.3
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~~ 289 (419)
..+.+.+.+.+++.|++++++++|++|..+ ++++ .+++ +|+++.+|.||.+++..|
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~-~~~v-~v~~~~g~~i~~D~vv~A~G~~p 264 (455)
T 2yqu_A 208 LEVSRAAERVFKKQGLTIRTGVRVTAVVPE-AKGA-RVELEGGEVLEADRVLVAVGRRP 264 (455)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEECCEEEEEEEe-CCEE-EEEECCCeEEEcCEEEECcCCCc
Confidence 457888888889999999999999999873 5543 4555 788999999998876654
No 134
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.34 E-value=1.4e-07 Score=91.91 Aligned_cols=42 Identities=24% Similarity=0.384 Sum_probs=39.3
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
.++||+|||||++|++||..|++.|++|+|+|+++.+||.|.
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~ 46 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCL 46 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCccc
Confidence 358999999999999999999999999999999999999764
No 135
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.33 E-value=2.1e-07 Score=88.49 Aligned_cols=57 Identities=14% Similarity=0.066 Sum_probs=45.2
Q ss_pred CcHHHHHHHHHHHc-CcEEEcCCccceEEEcCCCcEE-EEEe-CCeEEEcCEEEeCCCCCC
Q 014768 232 GELPQAFARLSAVY-GGTYMLNKPECKVEFDEEGKVV-GVTS-EGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 232 ~~l~~al~~~~~~~-G~~i~~~~~V~~I~~~~~~~v~-gV~~-~g~~i~ad~VV~~~~~~~ 289 (419)
..+.+.|.+.+++. |++|+++++|++|+.+ +++++ .|++ +|++++||.||.+.+...
T Consensus 107 ~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~-~~~v~g~v~~~~g~~~~ad~vV~AdG~~s 166 (399)
T 2x3n_A 107 ESLRRLVLEKIDGEATVEMLFETRIEAVQRD-ERHAIDQVRLNDGRVLRPRVVVGADGIAS 166 (399)
T ss_dssp HHHHHHHHHHHTTCTTEEEECSCCEEEEEEC-TTSCEEEEEETTSCEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHhhhcCCcEEEcCCEEEEEEEc-CCceEEEEEECCCCEEECCEEEECCCCCh
Confidence 35667777888887 9999999999999984 66664 5666 788999999998776653
No 136
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.33 E-value=1.6e-07 Score=93.78 Aligned_cols=57 Identities=18% Similarity=0.279 Sum_probs=46.1
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEeC----------------CeEEEcCEEEeCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSE----------------GETAKCKKVVCDPSYL 288 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~~----------------g~~i~ad~VV~~~~~~ 288 (419)
..+.+.|.+.+++.|++|+++++|++|..++++++++|++. |.+++||.||.+.+..
T Consensus 144 ~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~ 216 (584)
T 2gmh_A 144 GHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCH 216 (584)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTT
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCC
Confidence 35777788888888999999999999998544778888763 3689999999877665
No 137
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.33 E-value=2.3e-07 Score=88.43 Aligned_cols=36 Identities=28% Similarity=0.371 Sum_probs=33.3
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~G 40 (419)
.+|+|||||++||++|..|+++|++|+||||.+.+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~ 37 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAAS 37 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCC
Confidence 489999999999999999999999999999987653
No 138
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.32 E-value=1.8e-07 Score=92.30 Aligned_cols=42 Identities=26% Similarity=0.313 Sum_probs=39.3
Q ss_pred cceEEEECCCchHHHHhhccc-cCCCeEEEeccCCCCCCcccc
Q 014768 4 EYDVIVLGTGLKECILSGLLS-VDGLKVLHMDRNDYYGGESSS 45 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La-~~G~~V~vlE~~~~~GG~~~t 45 (419)
++||+|||||++|+++|..|+ +.|++|+|+|+++.+||.+..
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~ 50 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYW 50 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccc
Confidence 589999999999999999999 999999999999999997653
No 139
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.32 E-value=2.1e-07 Score=89.87 Aligned_cols=41 Identities=29% Similarity=0.315 Sum_probs=38.6
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
.+||+|||||++||+||..|+++|++|+|+|+++.+||...
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~ 162 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLV 162 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeee
Confidence 47999999999999999999999999999999999999754
No 140
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.32 E-value=2.3e-07 Score=91.68 Aligned_cols=42 Identities=26% Similarity=0.455 Sum_probs=39.3
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
.++||||||||++|+++|..|++.|++|+|+|+++.+||.+.
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~ 49 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWY 49 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccc
Confidence 358999999999999999999999999999999999999765
No 141
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.31 E-value=3.1e-07 Score=91.00 Aligned_cols=56 Identities=13% Similarity=0.185 Sum_probs=45.9
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYL 288 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~ 288 (419)
..+.+.|.+.+++.|++++.+ +|++|..++++.+++|++ +|+++.||.||.+.+..
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~ 221 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMR 221 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCc
Confidence 568888889888899999999 899998754566777877 77789999999877654
No 142
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.31 E-value=2e-07 Score=95.14 Aligned_cols=43 Identities=23% Similarity=0.366 Sum_probs=40.0
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccc
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t 45 (419)
..+||+|||||++||+||..|+++|++|+|+|+++.+||.+..
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~ 432 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQ 432 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeee
Confidence 4579999999999999999999999999999999999998764
No 143
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.31 E-value=1.5e-07 Score=87.04 Aligned_cols=43 Identities=16% Similarity=0.209 Sum_probs=38.4
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEecc----CCCCCCcccc
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDR----NDYYGGESSS 45 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~----~~~~GG~~~t 45 (419)
+.+||+|||||++|+++|..|+++|++|+|+|+ ...+||.+..
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~ 53 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTT 53 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeee
Confidence 358999999999999999999999999999999 6778887653
No 144
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.31 E-value=3.3e-07 Score=89.65 Aligned_cols=40 Identities=15% Similarity=0.217 Sum_probs=36.8
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCc
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~ 42 (419)
..+||+|||||++||++|..|++.|++|+|+|+++.+|+.
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~ 130 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRH 130 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCC
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCC
Confidence 3589999999999999999999999999999999988753
No 145
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.30 E-value=3.3e-07 Score=89.72 Aligned_cols=39 Identities=28% Similarity=0.497 Sum_probs=35.9
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCC
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (419)
+++||+|||||++||++|..|+++|.+|+|+||++.++.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~ 49 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTG 49 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCC
Confidence 468999999999999999999999999999999887653
No 146
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.30 E-value=2.6e-07 Score=83.93 Aligned_cols=60 Identities=13% Similarity=0.044 Sum_probs=44.9
Q ss_pred EEEecCCcCcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 014768 224 YIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 224 ~~~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~~ 289 (419)
......+...+.+.+.+.+++.|++++. ++|++|.. ++ .|.+ +|+++.+|.||.++++.|
T Consensus 166 v~~v~~~~~~~~~~~~~~l~~~gv~i~~-~~v~~i~~--~~---~v~~~~g~~~~~D~vi~a~G~~p 226 (297)
T 3fbs_A 166 TTFFTNGIVEPDADQHALLAARGVRVET-TRIREIAG--HA---DVVLADGRSIALAGLFTQPKLRI 226 (297)
T ss_dssp EEEECTTTCCCCHHHHHHHHHTTCEEEC-SCEEEEET--TE---EEEETTSCEEEESEEEECCEEEC
T ss_pred EEEEECCCCCCCHHHHHHHHHCCcEEEc-ceeeeeec--CC---eEEeCCCCEEEEEEEEEccCccc
Confidence 3344444446677788888999999995 89999874 33 5666 888999999999887654
No 147
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.30 E-value=1.9e-07 Score=90.80 Aligned_cols=41 Identities=29% Similarity=0.482 Sum_probs=37.6
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
+++||+|||||++|++||..|++.|++|+|+|++ .+||.+.
T Consensus 2 ~~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~ 42 (464)
T 2a8x_A 2 THYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCL 42 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCccc
Confidence 3689999999999999999999999999999998 7888764
No 148
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.29 E-value=3.5e-07 Score=90.69 Aligned_cols=39 Identities=26% Similarity=0.210 Sum_probs=36.0
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCc
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~ 42 (419)
++||+|||||++||++|..|+++|.+|+|+||++.++..
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~ 64 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITH 64 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCC
Confidence 589999999999999999999999999999999887643
No 149
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.28 E-value=3.7e-07 Score=90.76 Aligned_cols=37 Identities=27% Similarity=0.346 Sum_probs=33.6
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCCCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~G 40 (419)
++||+|||||++||++|+.|+++|++|+||||.+.++
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~ 85 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPV 85 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCC
Confidence 5799999999999999999999999999999998765
No 150
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.28 E-value=2.1e-07 Score=90.43 Aligned_cols=40 Identities=35% Similarity=0.469 Sum_probs=37.3
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
++||+|||||++|++||..|++.|++|+|+|+++ +||.|.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~ 45 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCL 45 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCC
Confidence 6899999999999999999999999999999988 888763
No 151
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.27 E-value=3.4e-07 Score=89.45 Aligned_cols=57 Identities=16% Similarity=0.109 Sum_probs=43.1
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCe-----EEEcCEEEeCCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGE-----TAKCKKVVCDPSYLP 289 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~-----~i~ad~VV~~~~~~~ 289 (419)
..+.+.+.+.+++.|++|+++++|++|..++++++ .|++ +++ ++.+|.||.+.+..|
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~~~D~vi~a~G~~p 289 (483)
T 3dgh_A 227 QQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNVETGEESEDVYDTVLWAIGRKG 289 (483)
T ss_dssp HHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEETTTCCEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecCCCCceeEEEcCEEEECccccc
Confidence 35778888889999999999999999987424444 3544 432 799999998876654
No 152
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.26 E-value=2.8e-07 Score=87.47 Aligned_cols=36 Identities=22% Similarity=0.393 Sum_probs=33.6
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (419)
++||+|||||++||++|..|+++|++|+|+||++.+
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~ 37 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPD 37 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 579999999999999999999999999999998753
No 153
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.26 E-value=4e-07 Score=88.33 Aligned_cols=41 Identities=15% Similarity=0.329 Sum_probs=38.7
Q ss_pred ceEEEECCCchHHHHhhcccc---CCCe---EEEeccCCCCCCcccc
Q 014768 5 YDVIVLGTGLKECILSGLLSV---DGLK---VLHMDRNDYYGGESSS 45 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~---~G~~---V~vlE~~~~~GG~~~t 45 (419)
+||+|||||++||+||..|++ .|++ |+|+|+++.+||.+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~ 49 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNY 49 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSC
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeec
Confidence 699999999999999999999 9999 9999999999998764
No 154
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.26 E-value=4.4e-07 Score=83.10 Aligned_cols=40 Identities=15% Similarity=0.301 Sum_probs=36.5
Q ss_pred ceEEEECCCchHHHHhhccccCCC-eEEEeccCCCCCCcccc
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGL-KVLHMDRNDYYGGESSS 45 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~-~V~vlE~~~~~GG~~~t 45 (419)
+||+|||||++|++||..|+++|+ +|+|+|++ .+||.+..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~ 42 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITG 42 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGG
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCccccc
Confidence 799999999999999999999999 99999995 67887653
No 155
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.26 E-value=5.8e-07 Score=90.78 Aligned_cols=38 Identities=16% Similarity=0.289 Sum_probs=35.4
Q ss_pred CcceEEEECCCchHHHHhhcccc-CCCeEEEeccCCCCC
Q 014768 3 EEYDVIVLGTGLKECILSGLLSV-DGLKVLHMDRNDYYG 40 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~-~G~~V~vlE~~~~~G 40 (419)
.++||+|||||++||++|+.|++ .|.+|+||||++.++
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~ 69 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPM 69 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 46899999999999999999999 999999999998764
No 156
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.26 E-value=2.9e-07 Score=90.01 Aligned_cols=56 Identities=18% Similarity=0.142 Sum_probs=45.4
Q ss_pred cHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 014768 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 233 ~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~~ 289 (419)
.+.+.+.+.+++.|++|+++++|++|..+ +++...|++ +|+++.||.||.+++..|
T Consensus 232 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~~~~v~~~~G~~i~~D~vv~a~G~~p 288 (490)
T 1fec_A 232 ELRKQLTEQLRANGINVRTHENPAKVTKN-ADGTRHVVFESGAEADYDVVMLAIGRVP 288 (490)
T ss_dssp HHHHHHHHHHHHTTEEEEETCCEEEEEEC-TTSCEEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCEEEEEECCCcEEEcCEEEEccCCCc
Confidence 57888889999999999999999999874 433345666 788999999998876654
No 157
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.22 E-value=2.7e-07 Score=90.54 Aligned_cols=55 Identities=18% Similarity=0.141 Sum_probs=45.3
Q ss_pred cHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 014768 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 233 ~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~~ 289 (419)
.+.+.+.+.+++.|++|+++++|++|..+ ++++ .|++ +|+++.||.||++++..|
T Consensus 224 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~-~~~v-~v~~~~g~~i~aD~Vv~a~G~~p 279 (499)
T 1xdi_A 224 DAALVLEESFAERGVRLFKNARAASVTRT-GAGV-LVTMTDGRTVEGSHALMTIGSVP 279 (499)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEEC-SSSE-EEEETTSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEe-CCEE-EEEECCCcEEEcCEEEECCCCCc
Confidence 57788888999999999999999999973 5555 4555 788999999998876654
No 158
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.22 E-value=4.9e-07 Score=85.42 Aligned_cols=35 Identities=17% Similarity=0.297 Sum_probs=33.1
Q ss_pred ceEEEECCCchHHHHhhccccC--CCeEEEeccCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVD--GLKVLHMDRNDYY 39 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~--G~~V~vlE~~~~~ 39 (419)
.||+|||||++||++|..|+++ |++|+|+||++.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 3899999999999999999999 9999999999876
No 159
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.21 E-value=5.4e-07 Score=89.43 Aligned_cols=54 Identities=15% Similarity=0.159 Sum_probs=42.9
Q ss_pred cHHHHHHHHHHHc-CcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCC
Q 014768 233 ELPQAFARLSAVY-GGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYL 288 (419)
Q Consensus 233 ~l~~al~~~~~~~-G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~ 288 (419)
.+.+.|.+.+++. |++++ +.+|+.|..+ ++++.+|.+ +|+++.||.||.+++.+
T Consensus 118 ~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d-~g~V~GV~t~~G~~i~Ad~VVLATG~~ 173 (641)
T 3cp8_A 118 QYSLYMRRIVEHEPNIDLL-QDTVIGVSAN-SGKFSSVTVRSGRAIQAKAAILACGTF 173 (641)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEE-TTEEEEEEETTSCEEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHhCCCCEEE-eeEEEEEEec-CCEEEEEEECCCcEEEeCEEEECcCCC
Confidence 4566677777774 89985 6699999984 888888888 78899999999877654
No 160
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.20 E-value=3e-07 Score=89.16 Aligned_cols=41 Identities=12% Similarity=0.220 Sum_probs=38.0
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
.++||+|||||++|++||..|++.|++|+|+|+ +.+||.|.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~ 44 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCL 44 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCC
Confidence 358999999999999999999999999999999 78999875
No 161
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.20 E-value=3.8e-07 Score=88.40 Aligned_cols=41 Identities=22% Similarity=0.269 Sum_probs=37.6
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
.++||+|||||++|++||..|++.|++|+|+|++ .+||.|.
T Consensus 2 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~ 42 (455)
T 1ebd_A 2 IETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCL 42 (455)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCc
Confidence 3589999999999999999999999999999998 7888763
No 162
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.19 E-value=7.4e-07 Score=88.41 Aligned_cols=56 Identities=14% Similarity=0.151 Sum_probs=46.8
Q ss_pred CcHHHHHHHHHHHc-CcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCC
Q 014768 232 GELPQAFARLSAVY-GGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYL 288 (419)
Q Consensus 232 ~~l~~al~~~~~~~-G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~ 288 (419)
..+.+.|.+.+++. |++++++ +|++|..++++.+++|++ +|+++.||.||.+.+..
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~ 251 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFR 251 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGG
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCc
Confidence 46888899999998 9999999 999998744567778887 78889999999877654
No 163
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.19 E-value=4.7e-07 Score=88.76 Aligned_cols=58 Identities=7% Similarity=0.023 Sum_probs=45.7
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeE-EEcCEEEeCCCCCCc
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGET-AKCKKVVCDPSYLPN 290 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~-i~ad~VV~~~~~~~~ 290 (419)
..+.+.+.+.+++.|++++++++|++|..+ +++...|++ +|++ +.||.||.+++..|.
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~ 276 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKKV-SDKNLSIHLSDGRIYEHFDHVIYCVGRSPD 276 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEES-STTCEEEEETTSCEEEEESEEEECCCBCCT
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEEc-CCceEEEEECCCcEEEECCEEEECCCCCcC
Confidence 357788888999999999999999999873 433235555 7877 999999998876653
No 164
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.19 E-value=7.1e-07 Score=91.45 Aligned_cols=42 Identities=21% Similarity=0.339 Sum_probs=39.5
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccc
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t 45 (419)
.+||+|||||++||+||..|+++|++|+|+|+++.+||.+..
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~ 430 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQ 430 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeee
Confidence 479999999999999999999999999999999999998764
No 165
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.19 E-value=5.2e-07 Score=86.71 Aligned_cols=34 Identities=15% Similarity=0.173 Sum_probs=32.0
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
.+||+|||||++||++|+.|+++|++|+|+|+++
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3699999999999999999999999999999986
No 166
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.17 E-value=6.8e-07 Score=88.26 Aligned_cols=56 Identities=7% Similarity=0.080 Sum_probs=44.8
Q ss_pred CcHHHHHHHHHHH-cCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCC
Q 014768 232 GELPQAFARLSAV-YGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYL 288 (419)
Q Consensus 232 ~~l~~al~~~~~~-~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~ 288 (419)
..+.+.|.+.+++ .|++++.+ +|++|..++++.+++|++ +|++++||.||.+.+..
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~ 232 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAK 232 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGG
T ss_pred HHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcc
Confidence 4577888888888 89999999 599998743566667777 77789999999876554
No 167
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.17 E-value=6.7e-07 Score=88.48 Aligned_cols=54 Identities=17% Similarity=0.164 Sum_probs=44.5
Q ss_pred cHHHHHHHHHHH-cCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCC
Q 014768 233 ELPQAFARLSAV-YGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYL 288 (419)
Q Consensus 233 ~l~~al~~~~~~-~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~ 288 (419)
.+.+.|.+.+++ .|++| ++++|++|.. +++++++|.+ +|.++.||.||.+++..
T Consensus 124 ~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~-e~g~V~GV~t~dG~~i~AdaVVLATG~~ 179 (637)
T 2zxi_A 124 RYREYMKKVCENQENLYI-KQEEVVDIIV-KNNQVVGVRTNLGVEYKTKAVVVTTGTF 179 (637)
T ss_dssp HHHHHHHHHHHTCTTEEE-EESCEEEEEE-SSSBEEEEEETTSCEEECSEEEECCTTC
T ss_pred HHHHHHHHHHHhCCCCEE-EEeEEEEEEe-cCCEEEEEEECCCcEEEeCEEEEccCCC
Confidence 467777777877 49998 5889999998 4888999988 88899999999877654
No 168
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.16 E-value=8.6e-07 Score=86.13 Aligned_cols=55 Identities=18% Similarity=0.262 Sum_probs=44.5
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe--CCeEEEcCEEEeCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS--EGETAKCKKVVCDPSYL 288 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~--~g~~i~ad~VV~~~~~~ 288 (419)
..+.++|.+.+++.|++++++++| +|..+ ++++.+|.. ++.++.||.||.+++-.
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~-~~~v~Gv~v~~~~g~~~a~~VVlAtGg~ 175 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVK-DGKVTGFVTEKRGLVEDVDKLVLATGGY 175 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEE-TTEEEEEEETTTEEECCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEe-CCEEEEEEEEeCCCeEEeeeEEECCCCC
Confidence 467888888888889999999999 99984 888888865 34568899998776544
No 169
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.16 E-value=9e-07 Score=87.89 Aligned_cols=54 Identities=19% Similarity=0.113 Sum_probs=44.3
Q ss_pred cHHHHHHHHHHH-cCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCC
Q 014768 233 ELPQAFARLSAV-YGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYL 288 (419)
Q Consensus 233 ~l~~al~~~~~~-~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~ 288 (419)
.+.+.|.+.+++ .|++| ++++|++|.. +++++++|.+ +|.++.||.||.+++.+
T Consensus 125 ~~~~~L~e~Le~~~GV~I-~~~~V~~L~~-e~g~V~GV~t~dG~~I~Ad~VVLATGt~ 180 (651)
T 3ces_A 125 LYRQAVRTALENQPNLMI-FQQAVEDLIV-ENDRVVGAVTQMGLKFRAKAVVLTVGTF 180 (651)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEE-SSSBEEEEEETTSEEEEEEEEEECCSTT
T ss_pred HHHHHHHHHHHhCCCCEE-EEEEEEEEEe-cCCEEEEEEECCCCEEECCEEEEcCCCC
Confidence 466777777777 59998 6789999998 4888989988 78899999999877654
No 170
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.16 E-value=9.8e-07 Score=80.71 Aligned_cols=39 Identities=23% Similarity=0.448 Sum_probs=35.4
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
++||+|||||++|+++|..|+++|++|+|+|+ .+||.+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~ 39 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQIL 39 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceec
Confidence 47999999999999999999999999999986 4788765
No 171
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.15 E-value=1.1e-06 Score=81.17 Aligned_cols=40 Identities=20% Similarity=0.073 Sum_probs=36.0
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
+||+|||||++|+.||..|+++|++|+|+|+++..+...+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~h 41 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPAH 41 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSSC
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCccc
Confidence 5899999999999999999999999999999986665544
No 172
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.14 E-value=5.3e-07 Score=88.20 Aligned_cols=41 Identities=22% Similarity=0.241 Sum_probs=38.4
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccc
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t 45 (419)
++||+|||||++|++||..|+++ ++|+|+|+++.+||.+..
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~ 148 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWL 148 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGG
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeec
Confidence 47999999999999999999999 999999999999998764
No 173
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=98.14 E-value=7e-07 Score=88.15 Aligned_cols=38 Identities=32% Similarity=0.538 Sum_probs=34.4
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCC
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (419)
.+||+||||||.+|+++|.+|++ |.+|+|||+.+..++
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~~~ 62 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLPTA 62 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCGGG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCcCC
Confidence 45999999999999999999999 999999999876543
No 174
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.14 E-value=1.2e-06 Score=86.83 Aligned_cols=36 Identities=19% Similarity=0.374 Sum_probs=33.5
Q ss_pred CcceEEEECCCchHHHHhhccccCC-CeEEEeccCCC
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDG-LKVLHMDRNDY 38 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G-~~V~vlE~~~~ 38 (419)
++||+||||||.+|+++|.+|++.| .+|+||||.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4699999999999999999999998 79999999765
No 175
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.14 E-value=6.9e-07 Score=94.24 Aligned_cols=41 Identities=27% Similarity=0.347 Sum_probs=39.4
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
++||+|||||++|++||..|++.|++|+|+|+++.+||.+.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec
Confidence 58999999999999999999999999999999999999887
No 176
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.13 E-value=8.1e-07 Score=87.40 Aligned_cols=56 Identities=9% Similarity=-0.034 Sum_probs=45.7
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~~ 289 (419)
..+++.+.+.+++.|+++++++.|.++... ++++. |.+ +++++.+|.|+++.+-.|
T Consensus 263 ~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~-~~~~~-v~~~~~~~~~~D~vLvAvGR~P 319 (542)
T 4b1b_A 263 QQCAVKVKLYMEEQGVMFKNGILPKKLTKM-DDKIL-VEFSDKTSELYDTVLYAIGRKG 319 (542)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEE-TTEEE-EEETTSCEEEESEEEECSCEEE
T ss_pred hhHHHHHHHHHHhhcceeecceEEEEEEec-CCeEE-EEEcCCCeEEEEEEEEcccccC
Confidence 458888999999999999999999999973 66554 444 888899999998776544
No 177
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.13 E-value=6.8e-07 Score=89.39 Aligned_cols=56 Identities=16% Similarity=0.158 Sum_probs=46.0
Q ss_pred CcHHHHHHHHHHHcC-cEEEcCCccceEEEcCCCcEEEEEe----CCe--EEEcCEEEeCCCCC
Q 014768 232 GELPQAFARLSAVYG-GTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVCDPSYL 288 (419)
Q Consensus 232 ~~l~~al~~~~~~~G-~~i~~~~~V~~I~~~~~~~v~gV~~----~g~--~i~ad~VV~~~~~~ 288 (419)
..+.++|.+.+++.| ++|+++++|++|..+ ++++.+|.. +|+ ++.|+.||.+++-+
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 196 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVD-DGHVRGLVAMNMMEGTLVQIRANAVVMATGGA 196 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSCEEECCCCC
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEEcCCCcEEEEEcCeEEECCCCC
Confidence 468889999998889 999999999999984 888888753 566 79999988766543
No 178
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.11 E-value=1.3e-06 Score=73.17 Aligned_cols=33 Identities=39% Similarity=0.539 Sum_probs=32.0
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
+||+|||||++|+.+|..|++.|.+|+|+|+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 799999999999999999999999999999987
No 179
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.11 E-value=1e-06 Score=88.81 Aligned_cols=54 Identities=13% Similarity=0.094 Sum_probs=44.1
Q ss_pred CcHHHHHHHHHHHc--CcEEEcCCccceEEEcCCC---cEEEEEe----CCe--EEEcCEEEeCCC
Q 014768 232 GELPQAFARLSAVY--GGTYMLNKPECKVEFDEEG---KVVGVTS----EGE--TAKCKKVVCDPS 286 (419)
Q Consensus 232 ~~l~~al~~~~~~~--G~~i~~~~~V~~I~~~~~~---~v~gV~~----~g~--~i~ad~VV~~~~ 286 (419)
..+..+|.+.+++. |++|+.++.|++|..+ ++ ++.||.. +|+ .+.|+.||.+++
T Consensus 166 ~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~-~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATG 230 (662)
T 3gyx_A 166 ESYKVIVAEAAKNALGQDRIIERIFIVKLLLD-KNTPNRIAGAVGFNLRANEVHIFKANAMVVACG 230 (662)
T ss_dssp TSHHHHHHHHHHHHHCTTTEECSEEECCCEEC-SSSTTBEEEEEEEESSSSCEEEEECSEEEECCC
T ss_pred HHHHHHHHHHHHhcCCCcEEEEceEEEEEEEe-CCccceEEEEEEEEcCCCcEEEEEeCEEEECCC
Confidence 57888999988888 9999999999999985 55 9999864 343 589999887653
No 180
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.10 E-value=1.5e-06 Score=88.31 Aligned_cols=41 Identities=20% Similarity=0.280 Sum_probs=38.8
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
.+||+|||||++|++||..|+++|++|+|+|+++.+||.+.
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFN 413 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeee
Confidence 57999999999999999999999999999999999999864
No 181
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.08 E-value=1.7e-06 Score=87.28 Aligned_cols=54 Identities=17% Similarity=0.126 Sum_probs=43.4
Q ss_pred CcHHHHHHHHHHHc-Cc-EEEcCCccceEEEcCCC---cEEEEEe----CCe--EEEcCEEEeCCC
Q 014768 232 GELPQAFARLSAVY-GG-TYMLNKPECKVEFDEEG---KVVGVTS----EGE--TAKCKKVVCDPS 286 (419)
Q Consensus 232 ~~l~~al~~~~~~~-G~-~i~~~~~V~~I~~~~~~---~v~gV~~----~g~--~i~ad~VV~~~~ 286 (419)
..+...|.+.+++. |+ +|+++++|++|..+ ++ +++||.. +|+ .+.|+.||.+++
T Consensus 151 ~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~-~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtG 215 (643)
T 1jnr_A 151 ESYKPIIAEAAKMAVGEENIYERVFIFELLKD-NNDPNAVAGAVGFSVREPKFYVFKAKAVILATG 215 (643)
T ss_dssp TTHHHHHHHHHHHHHCGGGEECSEEEEEEEEC-TTCTTBEEEEEEEESSSSCEEEEECSEEEECCC
T ss_pred HHHHHHHHHHHHhcCCCcEEEecCEEEEEEEc-CCccceeEEEEEEEecCCcEEEEEcCEEEECCC
Confidence 45778888888887 99 99999999999984 66 8988763 454 689999887554
No 182
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.08 E-value=1e-06 Score=85.61 Aligned_cols=40 Identities=28% Similarity=0.326 Sum_probs=36.9
Q ss_pred cceEEEECCCchHHHHhhccccCC-----CeEEEeccCCCCCCcc
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDG-----LKVLHMDRNDYYGGES 43 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G-----~~V~vlE~~~~~GG~~ 43 (419)
.+||||||||++||++|..|++.| .+|+|||+++.+|...
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~ 74 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHG 74 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSG
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcC
Confidence 579999999999999999999999 9999999999988443
No 183
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.06 E-value=1.2e-06 Score=84.72 Aligned_cols=42 Identities=14% Similarity=0.139 Sum_probs=38.7
Q ss_pred CcceEEEECCCchHHHHhhcccc-C------CCeEEEeccCCCCCCccc
Q 014768 3 EEYDVIVLGTGLKECILSGLLSV-D------GLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~-~------G~~V~vlE~~~~~GG~~~ 44 (419)
+.+||+|||||++|+.||..|++ . |++|+|+|+++.+||.++
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~ 50 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVR 50 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccc
Confidence 46899999999999999999999 7 999999999999998764
No 184
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.05 E-value=2.4e-06 Score=82.04 Aligned_cols=57 Identities=19% Similarity=0.307 Sum_probs=47.9
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEE--cCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEF--DEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~--~~~~~v~gV~~-~g~~i~ad~VV~~~~~~~ 289 (419)
..+.+.+.+.+++.|++++++++|++|.. + ++++.+|.+ +|+++.||.||.+++..|
T Consensus 191 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~v~~v~~~~G~~i~~D~Vv~a~G~~p 250 (431)
T 1q1r_A 191 PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTD-QQKVTAVLCEDGTRLPADLVIAGIGLIP 250 (431)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEECTT-TCCEEEEEETTSCEEECSEEEECCCEEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccC-CCcEEEEEeCCCCEEEcCEEEECCCCCc
Confidence 35777888888999999999999999986 3 577778887 888999999998887654
No 185
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.03 E-value=1.3e-06 Score=86.01 Aligned_cols=56 Identities=16% Similarity=0.181 Sum_probs=46.4
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYL 288 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~ 288 (419)
..+.+.|.+.+++.|++++.+ +|++|..++++.+++|++ +|++++||.||.+.+..
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~ 229 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFR 229 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGG
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcc
Confidence 467888888888899999999 999999744566778887 77789999999877654
No 186
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=98.03 E-value=2.3e-06 Score=84.89 Aligned_cols=37 Identities=35% Similarity=0.477 Sum_probs=34.5
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCCCC
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (419)
.+||+||||||.+|+++|.+|+++|++|+|||+++..
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 4699999999999999999999999999999998754
No 187
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.00 E-value=2.6e-06 Score=80.55 Aligned_cols=57 Identities=16% Similarity=0.150 Sum_probs=46.1
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCCc
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 290 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~~~ 290 (419)
..+.+.+.+.+++.|++++++++|++|..+ ++. ..|++ +|+++.||.||.+++..|.
T Consensus 187 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~-~~v~~~~g~~i~~d~vv~a~G~~p~ 244 (384)
T 2v3a_A 187 PAAAKAVQAGLEGLGVRFHLGPVLASLKKA-GEG-LEAHLSDGEVIPCDLVVSAVGLRPR 244 (384)
T ss_dssp HHHHHHHHHHHHTTTCEEEESCCEEEEEEE-TTE-EEEEETTSCEEEESEEEECSCEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEec-CCE-EEEEECCCCEEECCEEEECcCCCcC
Confidence 357788888999999999999999999873 554 35565 8889999999998876553
No 188
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.00 E-value=2.4e-06 Score=82.62 Aligned_cols=54 Identities=19% Similarity=0.161 Sum_probs=43.6
Q ss_pred cHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCCC
Q 014768 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 233 ~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~~g~~i~ad~VV~~~~~~~ 289 (419)
.+.+.+.+.+++. +++++++.|.+|.. ++++..+..+++++.||.||.+++..|
T Consensus 191 ~~~~~l~~~l~~~-v~i~~~~~v~~i~~--~~~v~~v~~~g~~i~~D~Vv~a~G~~p 244 (449)
T 3kd9_A 191 EVTDILEEKLKKH-VNLRLQEITMKIEG--EERVEKVVTDAGEYKAELVILATGIKP 244 (449)
T ss_dssp HHHHHHHHHHTTT-SEEEESCCEEEEEC--SSSCCEEEETTEEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHhC-cEEEeCCeEEEEec--cCcEEEEEeCCCEEECCEEEEeeCCcc
Confidence 4677778888888 99999999999985 335556666889999999998887654
No 189
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.00 E-value=2.7e-06 Score=83.70 Aligned_cols=40 Identities=23% Similarity=0.476 Sum_probs=36.4
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
..+||+|||||++|++||..|+++|++|+|+|+ .+||.+.
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~ 250 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVL 250 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGT
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCccc
Confidence 468999999999999999999999999999997 5788775
No 190
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.99 E-value=2.7e-06 Score=90.38 Aligned_cols=41 Identities=22% Similarity=0.440 Sum_probs=38.1
Q ss_pred cceEEEECCCchHHHHhhccccCCC-eEEEeccCCCCCCccc
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRNDYYGGESS 44 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~-~V~vlE~~~~~GG~~~ 44 (419)
.+||+|||||++||+||..|+++|+ +|+|+|+++.+||.+.
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~ 228 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLST 228 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHH
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCcccc
Confidence 4799999999999999999999999 7999999999999753
No 191
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.99 E-value=2.3e-06 Score=85.83 Aligned_cols=34 Identities=26% Similarity=0.295 Sum_probs=31.9
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccC
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~ 36 (419)
..+||+|||||++|++||..|++.|++|+|+|+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 4689999999999999999999999999999983
No 192
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.97 E-value=2.9e-06 Score=85.93 Aligned_cols=36 Identities=28% Similarity=0.383 Sum_probs=33.8
Q ss_pred cceEEEECCCchHHHHhhcccc-----CCCeEEEeccCCCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSV-----DGLKVLHMDRNDYY 39 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~-----~G~~V~vlE~~~~~ 39 (419)
++||+|||||++||++|..|++ .|.+|+|+||.+.+
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~ 48 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK 48 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCC
Confidence 5899999999999999999999 99999999998764
No 193
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.92 E-value=3.3e-06 Score=81.70 Aligned_cols=42 Identities=14% Similarity=0.035 Sum_probs=38.0
Q ss_pred CcceEEEECCCchHHHHhhccccCC--CeEEEeccCCCCCCccc
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDG--LKVLHMDRNDYYGGESS 44 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G--~~V~vlE~~~~~GG~~~ 44 (419)
..+||+|||||++|+.+|..|++.| ++|+|+|+++.+||.++
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~ 48 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVR 48 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceee
Confidence 3579999999999999999999998 99999999999998754
No 194
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.92 E-value=3.5e-06 Score=80.93 Aligned_cols=39 Identities=23% Similarity=0.334 Sum_probs=36.1
Q ss_pred ceEEEECCCchHHHHhhcccc--CCCeEEEeccCCCCCCcc
Q 014768 5 YDVIVLGTGLKECILSGLLSV--DGLKVLHMDRNDYYGGES 43 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~--~G~~V~vlE~~~~~GG~~ 43 (419)
.||+|||||++|+++|..|++ .|++|+|+|+++..++..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~ 43 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTP 43 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGG
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCC
Confidence 589999999999999999999 899999999999987754
No 195
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.91 E-value=4.8e-06 Score=81.41 Aligned_cols=55 Identities=18% Similarity=0.137 Sum_probs=45.4
Q ss_pred cHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 014768 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 233 ~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~~ 289 (419)
.+.+.+.+.++++|++++++++|++|..+ ++++ .|++ +|+++.||.||.+++..|
T Consensus 227 ~~~~~~~~~l~~~GV~v~~~~~V~~i~~~-~~~~-~v~l~dG~~i~aD~Vv~a~G~~p 282 (493)
T 1m6i_A 227 YLSNWTMEKVRREGVKVMPNAIVQSVGVS-SGKL-LIKLKDGRKVETDHIVAAVGLEP 282 (493)
T ss_dssp HHHHHHHHHHHTTTCEEECSCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEec-CCeE-EEEECCCCEEECCEEEECCCCCc
Confidence 47778888889999999999999999863 5554 5666 888999999998887654
No 196
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.88 E-value=5.3e-06 Score=82.02 Aligned_cols=37 Identities=19% Similarity=0.353 Sum_probs=34.3
Q ss_pred cceEEEECCCchHHHHhhcccc-CCCeEEEeccCCCCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSV-DGLKVLHMDRNDYYG 40 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~-~G~~V~vlE~~~~~G 40 (419)
+||+||||||.+|+++|.+|++ .|.+|+|||+.+..+
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~ 39 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDE 39 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCT
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCccc
Confidence 5899999999999999999998 799999999987764
No 197
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.88 E-value=5.5e-06 Score=79.70 Aligned_cols=39 Identities=26% Similarity=0.401 Sum_probs=35.8
Q ss_pred CCCcceEEEECCCchHHHHhhcccc---CCCeEEEeccCCCC
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSV---DGLKVLHMDRNDYY 39 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~---~G~~V~vlE~~~~~ 39 (419)
|....||||||||++|++||..|++ .|++|+|+|+++..
T Consensus 1 M~~m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~ 42 (437)
T 3sx6_A 1 MRGSAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYF 42 (437)
T ss_dssp CTTSCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEE
T ss_pred CCCCCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCC
Confidence 6666799999999999999999999 89999999999865
No 198
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.87 E-value=5.5e-06 Score=82.92 Aligned_cols=54 Identities=9% Similarity=0.001 Sum_probs=43.9
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~~ 289 (419)
..+.+.+.+.+++.|++++++++|++|..+ ++ +|.+ +|+++.||.||++++..|
T Consensus 228 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~---~v~~~~g~~i~~D~Vi~a~G~~p 282 (588)
T 3ics_A 228 YEMAAYVHEHMKNHDVELVFEDGVDALEEN-GA---VVRLKSGSVIQTDMLILAIGVQP 282 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEGG-GT---EEEETTSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEECCeEEEEecC-CC---EEEECCCCEEEcCEEEEccCCCC
Confidence 457888888999999999999999999752 34 3555 888999999998887654
No 199
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.85 E-value=6e-06 Score=79.82 Aligned_cols=57 Identities=16% Similarity=0.207 Sum_probs=48.3
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~~g~~i~ad~VV~~~~~~~ 289 (419)
..+.+.+.+.+++.|++++++++|++|.. +++++..|.++|+++.||.||.+++..|
T Consensus 191 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~-~~~~v~~v~~~g~~i~~D~vv~a~G~~p 247 (452)
T 2cdu_A 191 KEFTDILAKDYEAHGVNLVLGSKVAAFEE-VDDEIITKTLDGKEIKSDIAILCIGFRP 247 (452)
T ss_dssp HHHHHHHHHHHHHTTCEEEESSCEEEEEE-ETTEEEEEETTSCEEEESEEEECCCEEE
T ss_pred hhHHHHHHHHHHHCCCEEEcCCeeEEEEc-CCCeEEEEEeCCCEEECCEEEECcCCCC
Confidence 45778888899999999999999999987 3677777777888999999998887654
No 200
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.83 E-value=8.8e-06 Score=77.59 Aligned_cols=57 Identities=14% Similarity=0.086 Sum_probs=47.0
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCCc
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 290 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~~~ 290 (419)
..+.+.+.+.+++.|++++++++|++|.. ++++.+|++ +|+++.||.||++++..|.
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~ 242 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSG--EGQLEQVMASDGRSFVADSALICVGAEPA 242 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEEC--SSSCCEEEETTSCEEECSEEEECSCEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEec--cCcEEEEEECCCCEEEcCEEEEeeCCeec
Confidence 35677788888899999999999999985 346667877 8999999999998876643
No 201
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.81 E-value=7.6e-06 Score=77.95 Aligned_cols=51 Identities=22% Similarity=0.183 Sum_probs=42.6
Q ss_pred cHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 014768 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 233 ~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~~ 289 (419)
.+.+.+.+.+++.|++++++++|++|. + + .|++ +|+++.||.||.+++..|
T Consensus 188 ~~~~~l~~~l~~~GV~i~~~~~v~~i~-~-~----~v~~~~g~~i~~D~vi~a~G~~p 239 (408)
T 2gqw_A 188 TLADFVARYHAAQGVDLRFERSVTGSV-D-G----VVLLDDGTRIAADMVVVGIGVLA 239 (408)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEE-T-T----EEEETTSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHcCcEEEeCCEEEEEE-C-C----EEEECCCCEEEcCEEEECcCCCc
Confidence 467788888899999999999999997 4 3 4555 888999999999887654
No 202
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.79 E-value=5.1e-06 Score=79.18 Aligned_cols=52 Identities=15% Similarity=0.137 Sum_probs=42.1
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~~ 289 (419)
..+.+.+.+.+++.|++++++++|++|.. ++ |.+ +|+++.||.||.+++..|
T Consensus 218 ~~~~~~~~~~l~~~gV~~~~~~~v~~i~~--~~----v~~~~g~~~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKLVHNFKIKEIRE--HE----IVDEKGNTIPADITILLPPYTG 270 (409)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEECS--SE----EEETTSCEEECSEEEEECCEEC
T ss_pred HHHHHHHHHHHHHCCCEEEcCCceEEECC--Ce----EEECCCCEEeeeEEEECCCCCc
Confidence 35788888899999999999999999863 22 455 889999999998776654
No 203
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.78 E-value=7.9e-06 Score=79.81 Aligned_cols=56 Identities=16% Similarity=0.194 Sum_probs=46.0
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~~g~~i~ad~VV~~~~~~~ 289 (419)
..+.+.+.+.+++.|++++++++|++|.. ++++..|.++|+++.||.||.+++..|
T Consensus 236 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~v~~v~~~g~~i~~D~Vi~a~G~~p 291 (490)
T 2bc0_A 236 RDLTDLMAKNMEEHGIQLAFGETVKEVAG--NGKVEKIITDKNEYDVDMVILAVGFRP 291 (490)
T ss_dssp HHHHHHHHHHHHTTTCEEEETCCEEEEEC--SSSCCEEEESSCEEECSEEEECCCEEE
T ss_pred HHHHHHHHHHHHhCCeEEEeCCEEEEEEc--CCcEEEEEECCcEEECCEEEECCCCCc
Confidence 35777888888999999999999999984 455656667888999999998887654
No 204
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.78 E-value=8.8e-06 Score=78.52 Aligned_cols=56 Identities=16% Similarity=0.139 Sum_probs=45.4
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~~g~~i~ad~VV~~~~~~~ 289 (419)
..+.+.+.+.+++.|++++++++|++|.. ++++..|.++++++.||.||.+++..|
T Consensus 191 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~~~v~~v~~~~~~i~~d~vi~a~G~~p 246 (447)
T 1nhp_A 191 KEFTDVLTEEMEANNITIATGETVERYEG--DGRVQKVVTDKNAYDADLVVVAVGVRP 246 (447)
T ss_dssp HHHHHHHHHHHHTTTEEEEESCCEEEEEC--SSBCCEEEESSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEc--cCcEEEEEECCCEEECCEEEECcCCCC
Confidence 35778888888999999999999999985 355556667788999999998876554
No 205
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.77 E-value=1.4e-05 Score=75.02 Aligned_cols=51 Identities=25% Similarity=0.369 Sum_probs=40.3
Q ss_pred cHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCCc
Q 014768 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 290 (419)
Q Consensus 233 ~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~~~ 290 (419)
.+.+.+.+.+++.|++++++++|++|.. + +|++ +|+ +.+|.||.+++..|.
T Consensus 184 ~~~~~l~~~l~~~gV~i~~~~~v~~i~~--~----~v~~~~g~-i~~D~vi~a~G~~p~ 235 (367)
T 1xhc_A 184 ELSNMIKDMLEETGVKFFLNSELLEANE--E----GVLTNSGF-IEGKVKICAIGIVPN 235 (367)
T ss_dssp HHHHHHHHHHHHTTEEEECSCCEEEECS--S----EEEETTEE-EECSCEEEECCEEEC
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEe--e----EEEECCCE-EEcCEEEECcCCCcC
Confidence 5677788888999999999999999862 2 3555 666 999999987766543
No 206
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.74 E-value=1.1e-05 Score=78.48 Aligned_cols=56 Identities=14% Similarity=0.115 Sum_probs=46.4
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEeCCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~~g~~i~ad~VV~~~~~~~ 289 (419)
..+.+.+.+.+++.|++++++++|++|.. ++++..+.++++++.||.||.+++..|
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~--~~~v~~v~~~~~~i~~D~vi~a~G~~p 282 (480)
T 3cgb_A 227 GDMAEYIYKEADKHHIEILTNENVKAFKG--NERVEAVETDKGTYKADLVLVSVGVKP 282 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE--SSBEEEEEETTEEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHHcCcEEEcCCEEEEEEc--CCcEEEEEECCCEEEcCEEEECcCCCc
Confidence 35778888889999999999999999986 356767777778999999998876654
No 207
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.65 E-value=1.8e-05 Score=78.86 Aligned_cols=58 Identities=16% Similarity=0.138 Sum_probs=45.1
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEc------------------CCCcEEEEEeCCeEEEcCEEEeCCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFD------------------EEGKVVGVTSEGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~------------------~~~~v~gV~~~g~~i~ad~VV~~~~~~~ 289 (419)
..+.+.+.+.+++.|++++++++|++|..+ +++++..+..+|+++.||.||.+++..|
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p 267 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRP 267 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCcc
Confidence 357777888889999999999999999862 1455544334888999999998887654
No 208
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.65 E-value=2.8e-05 Score=73.33 Aligned_cols=39 Identities=10% Similarity=0.133 Sum_probs=35.7
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCC
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (419)
++.+|+|||||++|++||..|++.|.+|+|+|+++.++.
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y 46 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPY 46 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCB
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCc
Confidence 357899999999999999999888999999999998874
No 209
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.55 E-value=4.3e-05 Score=74.68 Aligned_cols=56 Identities=16% Similarity=0.089 Sum_probs=42.2
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CC----eEEEcCEEEeCCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EG----ETAKCKKVVCDPSYLP 289 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g----~~i~ad~VV~~~~~~~ 289 (419)
..+.+.+.+.+++.|+++++|++|++|+ +++....+.. +| +++.||.||.+++..|
T Consensus 272 ~~~~~~~~~~L~~~GV~v~~~~~v~~v~--~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~ 332 (502)
T 4g6h_A 272 KKLSSYAQSHLENTSIKVHLRTAVAKVE--EKQLLAKTKHEDGKITEETIPYGTLIWATGNKA 332 (502)
T ss_dssp HHHHHHHHHHHHHTTCEEETTEEEEEEC--SSEEEEEEECTTSCEEEEEEECSEEEECCCEEC
T ss_pred HHHHHHHHHHHHhcceeeecCceEEEEe--CCceEEEEEecCcccceeeeccCEEEEccCCcC
Confidence 4577888888999999999999999985 2443334443 54 4699999998886544
No 210
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.48 E-value=4e-05 Score=73.44 Aligned_cols=54 Identities=19% Similarity=0.198 Sum_probs=39.3
Q ss_pred cCcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-C--CeEEEcCEEEeCCCCC
Q 014768 231 LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-E--GETAKCKKVVCDPSYL 288 (419)
Q Consensus 231 ~~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~--g~~i~ad~VV~~~~~~ 288 (419)
.....+.+.+.++++|+++++|+.|++|+ .++++ +.. + ++++.||.||.+++..
T Consensus 199 ~~~~~~~l~~~l~~~GV~~~~~~~v~~v~---~~~~~-~~~~~g~~~~i~~d~vi~~~G~~ 255 (430)
T 3hyw_A 199 IGASKRLVEDLFAERNIDWIANVAVKAIE---PDKVI-YEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp STTHHHHHHHHHHHTTCEEECSCEEEEEC---SSEEE-EECTTSCEEEEECSEEEEECEEE
T ss_pred hHHHHHHHHHHHHhCCeEEEeCceEEEEe---CCceE-EEeeCCCceEeecceEEEeccCC
Confidence 45666777788899999999999999885 33332 332 3 4689999998776543
No 211
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.47 E-value=4.3e-05 Score=73.37 Aligned_cols=52 Identities=13% Similarity=0.114 Sum_probs=41.6
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~~ 289 (419)
..+.+.+.+.+++.|++++++++|+++.- + .|.+ +|+++.+|.||.+.+..|
T Consensus 188 ~~~~~~~~~~l~~~gV~i~~~~~v~~~~~---~---~v~~~~g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 188 ADMNQPILDELDKREIPYRLNEEINAING---N---EITFKSGKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp GGGGHHHHHHHHHTTCCEEESCCEEEEET---T---EEEETTSCEEECSEEEECCCEEE
T ss_pred chhHHHHHHHhhccceEEEeccEEEEecC---C---eeeecCCeEEeeeeEEEEeceec
Confidence 45778888899999999999999998753 2 2445 899999999998776544
No 212
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.41 E-value=5e-05 Score=72.07 Aligned_cols=38 Identities=18% Similarity=0.311 Sum_probs=32.7
Q ss_pred ceEEEECCCchHHHHhhccccCC--CeEEEeccCCCCCCc
Q 014768 5 YDVIVLGTGLKECILSGLLSVDG--LKVLHMDRNDYYGGE 42 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G--~~V~vlE~~~~~GG~ 42 (419)
.+|||||||.+|++||.+|++.| .+|+|+|+++....+
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~ 42 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTC 42 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECS
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCc
Confidence 47999999999999999998876 599999999875443
No 213
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.99 E-value=8.3e-05 Score=72.70 Aligned_cols=37 Identities=16% Similarity=0.206 Sum_probs=28.9
Q ss_pred cceEEEECCCchHHHHhhccccCCC--------------eEEEeccCCCCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGL--------------KVLHMDRNDYYG 40 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~--------------~V~vlE~~~~~G 40 (419)
-+||||||+|++||++|+.|.++|. .++.+|+.+..+
T Consensus 39 i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~ 89 (501)
T 4b63_A 39 LHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFA 89 (501)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCC
T ss_pred cCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCC
Confidence 3899999999999999999987543 556666665443
No 214
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=96.35 E-value=0.0023 Score=61.40 Aligned_cols=39 Identities=26% Similarity=0.244 Sum_probs=35.6
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCc
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~ 42 (419)
..+++|||+|..|+.+|..|++.|.+|+++|+.+.+..+
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 187 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV 187 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc
Confidence 468999999999999999999999999999999887653
No 215
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.30 E-value=0.0019 Score=60.78 Aligned_cols=38 Identities=13% Similarity=0.034 Sum_probs=35.4
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCc
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~ 42 (419)
.+|+|||+|..|+-+|..|++.|.+|+|+|+.+.+..+
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~ 184 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLER 184 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh
Confidence 47999999999999999999999999999999988665
No 216
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.27 E-value=0.0028 Score=57.52 Aligned_cols=36 Identities=22% Similarity=0.164 Sum_probs=33.4
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~G 40 (419)
.+|+|||||..|+-+|..|++.|.+|+|+|+.+.+-
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~ 181 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELR 181 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccC
Confidence 479999999999999999999999999999988764
No 217
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=96.27 E-value=0.0027 Score=56.89 Aligned_cols=38 Identities=29% Similarity=0.301 Sum_probs=34.4
Q ss_pred CCCcceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
|++..+|.|||+|..|...|..|+++|++|+++|+++.
T Consensus 1 Mm~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 1 MTGITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTD 38 (283)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 66556899999999999999999999999999998763
No 218
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.24 E-value=0.0026 Score=49.97 Aligned_cols=34 Identities=24% Similarity=0.339 Sum_probs=30.8
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
..+|+|||+|..|...|..|++.|++|+++|+++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3589999999999999999999999999999854
No 219
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.19 E-value=0.0031 Score=50.86 Aligned_cols=34 Identities=26% Similarity=0.559 Sum_probs=31.5
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
.+|+|||+|..|...|..|.+.|++|+++++++.
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 5799999999999999999999999999999753
No 220
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.13 E-value=0.0024 Score=50.49 Aligned_cols=33 Identities=33% Similarity=0.498 Sum_probs=30.9
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
.+++|+|+|-.|...|..|+++|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999964
No 221
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.07 E-value=0.0039 Score=50.09 Aligned_cols=34 Identities=18% Similarity=0.079 Sum_probs=31.5
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
+.+++|+|+|-.|...|..|.+.|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4589999999999999999999999999999963
No 222
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.06 E-value=0.0033 Score=49.68 Aligned_cols=34 Identities=12% Similarity=0.262 Sum_probs=31.5
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
-+|+|||.|-.|...|..|.+.|++|+++|+++.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 4799999999999999999999999999999753
No 223
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.99 E-value=0.0033 Score=60.55 Aligned_cols=37 Identities=16% Similarity=0.101 Sum_probs=34.5
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (419)
.+++|||||..|+-+|..|++.|.+|+++|+.+.+..
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 208 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP 208 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc
Confidence 4799999999999999999999999999999988764
No 224
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=95.98 E-value=0.0039 Score=60.14 Aligned_cols=37 Identities=16% Similarity=0.088 Sum_probs=34.2
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (419)
.+++|||+|..|+-+|..|++.|.+|+|+|+.+.+..
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 206 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP 206 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc
Confidence 4799999999999999999999999999999987654
No 225
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=95.94 E-value=0.0047 Score=57.95 Aligned_cols=40 Identities=23% Similarity=0.285 Sum_probs=35.8
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcc
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGES 43 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~ 43 (419)
..+++|||+|..|+.+|..|++.|.+|+++|+.+.+..+.
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~ 184 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGL 184 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhcc
Confidence 3579999999999999999999999999999998876543
No 226
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.93 E-value=0.0032 Score=57.09 Aligned_cols=34 Identities=26% Similarity=0.377 Sum_probs=31.4
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
-+|.|||||..|...|..++.+|++|+++|.++.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 4799999999999999999999999999998653
No 227
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.92 E-value=0.0043 Score=57.85 Aligned_cols=37 Identities=27% Similarity=0.440 Sum_probs=34.4
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (419)
.+++|||+|..|+-+|..|++.|.+|+++|+.+.+..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 180 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG 180 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc
Confidence 4799999999999999999999999999999988755
No 228
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=95.91 E-value=0.0044 Score=59.61 Aligned_cols=37 Identities=22% Similarity=0.181 Sum_probs=33.9
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (419)
.+++|||+|..|+.+|..|++.|.+|+++|+.+.+..
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~ 204 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILP 204 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcccc
Confidence 4799999999999999999999999999999887643
No 229
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.85 E-value=0.0048 Score=59.38 Aligned_cols=37 Identities=19% Similarity=0.152 Sum_probs=34.2
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (419)
.+++|||+|..|+-+|..|++.|.+|+++|+.+.+..
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 207 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS 207 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc
Confidence 5799999999999999999999999999999987654
No 230
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=95.82 E-value=0.0054 Score=59.41 Aligned_cols=38 Identities=18% Similarity=0.246 Sum_probs=35.1
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCc
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~ 42 (419)
.+++|||+|..|+-+|..|++.|.+|+++|+.+.+...
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 221 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS 221 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc
Confidence 47999999999999999999999999999999987663
No 231
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=95.82 E-value=0.0059 Score=55.27 Aligned_cols=35 Identities=26% Similarity=0.279 Sum_probs=32.3
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (419)
.+++|||+|..|+-+|..|++.|.+|+++|+.+..
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~ 187 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAF 187 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeecccccc
Confidence 57999999999999999999999999999987654
No 232
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=95.80 E-value=0.005 Score=57.14 Aligned_cols=37 Identities=30% Similarity=0.348 Sum_probs=31.9
Q ss_pred CCCcceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
||+..+|.|||+|..|...|..|+++|++|+++++++
T Consensus 1 mm~~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 1 MIESKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCcCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 6666799999999999999999999999999999864
No 233
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.71 E-value=0.0065 Score=46.01 Aligned_cols=33 Identities=21% Similarity=0.393 Sum_probs=30.6
Q ss_pred ceEEEECCCchHHHHhhccccCC-CeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDG-LKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G-~~V~vlE~~~ 37 (419)
.+|+|+|+|..|...+..|.+.| ++|+++++++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 57999999999999999999999 9999999863
No 234
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=95.66 E-value=0.0064 Score=58.38 Aligned_cols=37 Identities=24% Similarity=0.181 Sum_probs=34.0
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (419)
.+++|||+|..|+-+|..|++.|.+|+++|+.+.+..
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~ 204 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP 204 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh
Confidence 4799999999999999999999999999999987653
No 235
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=95.59 E-value=0.0078 Score=54.23 Aligned_cols=35 Identities=11% Similarity=-0.069 Sum_probs=32.7
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
..+|.|||.|..|...|..|+++|++|+++++++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999999875
No 236
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=95.59 E-value=0.0078 Score=56.98 Aligned_cols=39 Identities=13% Similarity=0.227 Sum_probs=35.4
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCc
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~ 42 (419)
..+|+|||+|..|+-+|..|++.|.+|+++|+.+.+..+
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 183 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR 183 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc
Confidence 357999999999999999999999999999999887654
No 237
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=95.52 E-value=0.018 Score=55.26 Aligned_cols=37 Identities=22% Similarity=0.139 Sum_probs=34.2
Q ss_pred ceEEEECCCchHHHHhhccccC--CCeEEEeccCCCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVD--GLKVLHMDRNDYYGG 41 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~--G~~V~vlE~~~~~GG 41 (419)
+||+|||||++|++||..|++. |.+|+|+|+++.+|.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~ 39 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISF 39 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCc
Confidence 4899999999999999999998 999999999987654
No 238
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.42 E-value=0.0088 Score=57.66 Aligned_cols=36 Identities=28% Similarity=0.293 Sum_probs=33.5
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~G 40 (419)
.+++|||+|..|+-+|..|++.|.+|+++|+.+.+.
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l 202 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL 202 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc
Confidence 479999999999999999999999999999988765
No 239
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.39 E-value=0.0094 Score=53.88 Aligned_cols=33 Identities=24% Similarity=0.415 Sum_probs=30.7
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
.+|.|||+|..|...|..|+++|++|+++|+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999874
No 240
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=95.38 E-value=0.0085 Score=54.58 Aligned_cols=37 Identities=24% Similarity=0.357 Sum_probs=34.0
Q ss_pred CCCcceEEEECCCchHHHHhhccccCCC-eEEEeccCC
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G~-~V~vlE~~~ 37 (419)
|.+..+|.|||+|..|...|..|+++|+ +|+++|.++
T Consensus 1 M~~~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 1 MIERRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 6666799999999999999999999998 999999975
No 241
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=95.29 E-value=0.03 Score=53.31 Aligned_cols=40 Identities=20% Similarity=0.294 Sum_probs=35.8
Q ss_pred CCCcceEEEECCCchHHHHhhccccCCC--eEEEeccCCCCC
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDGL--KVLHMDRNDYYG 40 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G~--~V~vlE~~~~~G 40 (419)
|++.+||+|||||++|++||..|++.|+ +|+|+|+++..+
T Consensus 1 M~~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~ 42 (431)
T 1q1r_A 1 MNANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIP 42 (431)
T ss_dssp -CCSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCC
T ss_pred CCCCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCC
Confidence 6667899999999999999999999998 899999988754
No 242
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=95.27 E-value=0.0097 Score=57.14 Aligned_cols=36 Identities=28% Similarity=0.249 Sum_probs=33.3
Q ss_pred CcceEEEECCCchHHHHhhccccC-CC-eEEEeccCCC
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVD-GL-KVLHMDRNDY 38 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~-G~-~V~vlE~~~~ 38 (419)
+..+|.|||+|..|+..|..|+++ |+ +|+++|+++.
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 346899999999999999999999 99 9999999876
No 243
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=95.23 E-value=0.038 Score=47.67 Aligned_cols=36 Identities=19% Similarity=0.347 Sum_probs=33.5
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
+++||+|||||++|+.+|..|++.|.+|+|+|++..
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~ 37 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLD 37 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 468999999999999999999999999999999843
No 244
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=95.22 E-value=0.011 Score=57.47 Aligned_cols=37 Identities=24% Similarity=0.252 Sum_probs=34.3
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (419)
.+|+|||+|..|+-+|..|++.|.+|+++|+.+.+-.
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~ 231 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLA 231 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhh
Confidence 5799999999999999999999999999999987654
No 245
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=95.18 E-value=0.011 Score=57.03 Aligned_cols=37 Identities=22% Similarity=0.309 Sum_probs=34.3
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (419)
.+++|||+|..|+-+|..|++.|.+|+++|+.+.+..
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 215 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGG 215 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSC
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCC
Confidence 4799999999999999999999999999999988755
No 246
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=95.14 E-value=0.014 Score=56.81 Aligned_cols=38 Identities=26% Similarity=0.220 Sum_probs=34.9
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCc
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~ 42 (419)
.+++|||+|..|+-+|..|++.|.+|+++|+.+.+...
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~ 212 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL 212 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc
Confidence 47999999999999999999999999999999987643
No 247
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=95.14 E-value=0.0096 Score=57.72 Aligned_cols=37 Identities=14% Similarity=0.151 Sum_probs=34.1
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (419)
.+++|||+|..|+-+|..|++.|.+|+++|+.+.+..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~ 222 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ 222 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc
Confidence 4799999999999999999999999999999987654
No 248
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=95.14 E-value=0.012 Score=56.68 Aligned_cols=37 Identities=16% Similarity=0.083 Sum_probs=34.1
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (419)
.+++|||+|..|+-+|..|++.|.+|+++|+.+.+..
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 208 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP 208 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc
Confidence 4799999999999999999999999999999987654
No 249
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=95.12 E-value=0.0092 Score=54.28 Aligned_cols=34 Identities=26% Similarity=0.377 Sum_probs=31.6
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
.+|.|||+|..|...|..|+++|++|+++|+++.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5799999999999999999999999999998753
No 250
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=95.10 E-value=0.012 Score=54.41 Aligned_cols=37 Identities=16% Similarity=0.135 Sum_probs=32.2
Q ss_pred CCCcceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
|++..+|.|||.|..|...|..|+++|++|+++++++
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 5556789999999999999999999999999999875
No 251
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=95.10 E-value=0.013 Score=53.49 Aligned_cols=33 Identities=30% Similarity=0.495 Sum_probs=31.2
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
.+|.|||+|..|...|..|+++|++|+++.+++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 479999999999999999999999999999975
No 252
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.06 E-value=0.014 Score=56.01 Aligned_cols=34 Identities=26% Similarity=0.232 Sum_probs=31.8
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
.+|.|||.|.+|+++|..|+++|++|++.|+++.
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~ 43 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPF 43 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCG
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcc
Confidence 5799999999999999999999999999999763
No 253
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=95.05 E-value=0.022 Score=53.87 Aligned_cols=38 Identities=13% Similarity=0.262 Sum_probs=34.9
Q ss_pred ceEEEECCCchHHHHhhccccCCCe--EEEeccCCCCCCc
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLK--VLHMDRNDYYGGE 42 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~--V~vlE~~~~~GG~ 42 (419)
.||+|||||++|++||..|+++|++ |+|+|+++.++..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~ 42 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYD 42 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBC
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcC
Confidence 3899999999999999999999987 9999999987654
No 254
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.03 E-value=0.013 Score=56.63 Aligned_cols=34 Identities=18% Similarity=0.348 Sum_probs=31.6
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
.++|.|||+|..|+..|..|+++|++|+++++++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3689999999999999999999999999999864
No 255
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.00 E-value=0.008 Score=51.44 Aligned_cols=33 Identities=15% Similarity=0.253 Sum_probs=30.6
Q ss_pred eEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 6 dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
+|+|||+|-.|...|..|.++|++|+++|+++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 699999999999999999999999999998643
No 256
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.99 E-value=0.0098 Score=49.29 Aligned_cols=33 Identities=21% Similarity=0.225 Sum_probs=30.8
Q ss_pred ceEEEECCCchHHHHhhccccC-CCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVD-GLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~-G~~V~vlE~~~ 37 (419)
.+|+|||+|..|...|..|.+. |++|+++|+++
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 4799999999999999999999 99999999965
No 257
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=94.99 E-value=0.016 Score=52.80 Aligned_cols=37 Identities=19% Similarity=0.420 Sum_probs=32.9
Q ss_pred CCCcceEEEECCCchHHHHhhccccCCC-eEEEeccCC
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G~-~V~vlE~~~ 37 (419)
|....+|.|||+|-.|...|..|+..|+ +|.++|.+.
T Consensus 1 m~~~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 1 MAPKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 6556789999999999999999999998 999999874
No 258
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=94.97 E-value=0.04 Score=53.92 Aligned_cols=44 Identities=32% Similarity=0.443 Sum_probs=40.4
Q ss_pred CCCcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
|+.++||+|||||++|++||..|++.|++|+|+|+++.+||.|.
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~ 83 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCP 83 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCccc
Confidence 34568999999999999999999999999999999998999865
No 259
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.97 E-value=0.014 Score=53.09 Aligned_cols=33 Identities=24% Similarity=0.367 Sum_probs=30.5
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
.+|.|||+|-.|.+.|..|+++|++|+++.+++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 479999999999999999999999999999975
No 260
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=94.95 E-value=0.013 Score=55.36 Aligned_cols=40 Identities=20% Similarity=0.319 Sum_probs=36.0
Q ss_pred cceEEEECCCchHHHHhhccccC--CCeEEEeccCCCCCCcc
Q 014768 4 EYDVIVLGTGLKECILSGLLSVD--GLKVLHMDRNDYYGGES 43 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~--G~~V~vlE~~~~~GG~~ 43 (419)
++||+|||||++|+++|+.|+++ |++|+|||+++..+|..
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s 77 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEG 77 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTS
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcch
Confidence 48999999999999999999999 99999999987665543
No 261
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=94.95 E-value=0.014 Score=55.81 Aligned_cols=33 Identities=21% Similarity=0.330 Sum_probs=31.2
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
.+|.|||+|..|+..|..|+++|++|+++++++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 489999999999999999999999999999875
No 262
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=94.93 E-value=0.017 Score=52.14 Aligned_cols=35 Identities=29% Similarity=0.224 Sum_probs=33.0
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (419)
.+|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 178 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGF 178 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCcc
Confidence 57999999999999999999999999999998876
No 263
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=94.92 E-value=0.013 Score=52.48 Aligned_cols=33 Identities=21% Similarity=0.300 Sum_probs=30.5
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
+.+|.|||+|..|...|..|+ +|++|+++|+++
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 367999999999999999999 999999999875
No 264
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.91 E-value=0.012 Score=46.37 Aligned_cols=33 Identities=27% Similarity=0.261 Sum_probs=30.4
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
.+|+|+|+|-.|...|..|.+.|++|+++++++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999863
No 265
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=94.87 E-value=0.018 Score=55.26 Aligned_cols=38 Identities=16% Similarity=0.255 Sum_probs=34.9
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCc
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~ 42 (419)
.+++|||+|..|+-+|..|++.|.+|+++|+.+.+...
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 186 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRR 186 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh
Confidence 48999999999999999999999999999999877654
No 266
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=94.86 E-value=0.033 Score=54.15 Aligned_cols=40 Identities=28% Similarity=0.410 Sum_probs=35.7
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCc
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~ 42 (419)
+++||+|||||++|+++|+.|+++|++|+|+||++..+|.
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~~gt 41 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACAT 41 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSG
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCCCCc
Confidence 4689999999999999999999999999999998765543
No 267
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=94.79 E-value=0.019 Score=56.40 Aligned_cols=34 Identities=21% Similarity=0.090 Sum_probs=32.2
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
.+|+|||+|.+|+-+|..|++.|.+|+|+++.+.
T Consensus 179 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 5799999999999999999999999999999876
No 268
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=94.78 E-value=0.018 Score=51.89 Aligned_cols=35 Identities=17% Similarity=-0.049 Sum_probs=33.0
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (419)
.+|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~ 179 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEM 179 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCccc
Confidence 47999999999999999999999999999999877
No 269
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=94.77 E-value=0.057 Score=53.16 Aligned_cols=36 Identities=11% Similarity=0.238 Sum_probs=33.5
Q ss_pred CcceEEEECCCchHHHHhhcccc---CCCeEEEeccCCC
Q 014768 3 EEYDVIVLGTGLKECILSGLLSV---DGLKVLHMDRNDY 38 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~---~G~~V~vlE~~~~ 38 (419)
+.+||||||||++|+++|+.|++ .|.+|+|+|+.+.
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 62 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDI 62 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCC
Confidence 46899999999999999999999 9999999999764
No 270
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=94.77 E-value=0.015 Score=53.85 Aligned_cols=35 Identities=11% Similarity=0.040 Sum_probs=29.7
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (419)
.+|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~ 201 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGL 201 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC----
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCC
Confidence 47999999999999999999999999999997654
No 271
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.75 E-value=0.027 Score=44.56 Aligned_cols=33 Identities=21% Similarity=0.320 Sum_probs=30.4
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
.+|+|||+|..|...|..|++.|.+|++++++.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 479999999999999999999999999999864
No 272
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=94.75 E-value=0.064 Score=52.26 Aligned_cols=35 Identities=17% Similarity=0.341 Sum_probs=30.8
Q ss_pred cceEEEECCCchHHHHhhcccc---CCCeEEEeccCCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSV---DGLKVLHMDRNDY 38 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~---~G~~V~vlE~~~~ 38 (419)
.+||||||||++|+++|+.|++ +|.+|+|+|+.+.
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~ 39 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNV 39 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC---
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCC
Confidence 3699999999999999999999 9999999999864
No 273
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=94.74 E-value=0.011 Score=57.07 Aligned_cols=37 Identities=14% Similarity=0.131 Sum_probs=34.1
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (419)
.+++|||+|..|+-+|..|++.|.+|+++|+.+.+..
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~ 214 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP 214 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc
Confidence 4799999999999999999999999999999987754
No 274
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=94.73 E-value=0.014 Score=55.69 Aligned_cols=38 Identities=24% Similarity=0.231 Sum_probs=34.5
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCc
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~ 42 (419)
.+++|||+|..|+-+|..|++.|.+|+++|+.+.+...
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~ 185 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL 185 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTT
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeecccccc
Confidence 47999999999999999999999999999999887543
No 275
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=94.73 E-value=0.083 Score=52.41 Aligned_cols=40 Identities=23% Similarity=0.326 Sum_probs=37.1
Q ss_pred cceEEEECCCchHHHHhhccccC------CCeEEEeccCCCCCCcc
Q 014768 4 EYDVIVLGTGLKECILSGLLSVD------GLKVLHMDRNDYYGGES 43 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~------G~~V~vlE~~~~~GG~~ 43 (419)
++||||||||++||++|..|+++ |.+|+||||++.+|+..
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~ 80 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHT 80 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTC
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCcc
Confidence 48999999999999999999998 99999999999988753
No 276
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.72 E-value=0.017 Score=53.09 Aligned_cols=33 Identities=18% Similarity=0.281 Sum_probs=30.9
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~ 36 (419)
..+|.|||+|-.|...|..|+++|++|++++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 458999999999999999999999999999984
No 277
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.72 E-value=0.021 Score=48.52 Aligned_cols=34 Identities=15% Similarity=0.277 Sum_probs=31.8
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
.+|.|||+|..|.+.|..|+++|++|+++++++.
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 5799999999999999999999999999999765
No 278
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=94.69 E-value=0.019 Score=51.33 Aligned_cols=33 Identities=24% Similarity=0.194 Sum_probs=30.9
Q ss_pred eEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 6 dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
+|.|||+|..|...|..|+++|++|+++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 699999999999999999999999999998764
No 279
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=94.68 E-value=0.022 Score=51.91 Aligned_cols=35 Identities=26% Similarity=0.336 Sum_probs=33.0
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (419)
.+|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~ 194 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAF 194 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcC
Confidence 47999999999999999999999999999998876
No 280
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=94.65 E-value=0.015 Score=55.54 Aligned_cols=37 Identities=22% Similarity=0.292 Sum_probs=33.5
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (419)
.+|.|||.|.+|+++|..|+++|++|++.|.+...-|
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~~ 42 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPG 42 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCTT
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcch
Confidence 4799999999999999999999999999999876543
No 281
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=94.64 E-value=0.024 Score=51.59 Aligned_cols=36 Identities=22% Similarity=0.178 Sum_probs=33.2
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~G 40 (419)
.+|+|||+|..|+-+|..|++.|.+|+++++.+.+.
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~ 188 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR 188 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC
Confidence 479999999999999999999999999999988763
No 282
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.63 E-value=0.019 Score=55.14 Aligned_cols=35 Identities=20% Similarity=0.300 Sum_probs=32.4
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
.++|||+|+|-.|...|..|++.|++|+|+|+++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 46899999999999999999999999999999753
No 283
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=94.63 E-value=0.047 Score=52.91 Aligned_cols=42 Identities=21% Similarity=0.294 Sum_probs=38.1
Q ss_pred CcceEEEECCCchHHHHhhcccc-CCCeEEEec--------cCCCCCCccc
Q 014768 3 EEYDVIVLGTGLKECILSGLLSV-DGLKVLHMD--------RNDYYGGESS 44 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~-~G~~V~vlE--------~~~~~GG~~~ 44 (419)
.++||+|||||++|++||..|++ .|++|+|+| +.+.+||.|.
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~ 52 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCV 52 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHH
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCcccc
Confidence 46899999999999999999999 999999999 4678899764
No 284
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=94.60 E-value=0.021 Score=56.21 Aligned_cols=35 Identities=17% Similarity=0.229 Sum_probs=32.6
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (419)
.+|+|||+|.+|+-+|..|++.|.+|+|+++.+..
T Consensus 186 krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNW 220 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCC
T ss_pred CeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCc
Confidence 47999999999999999999999999999998763
No 285
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=94.60 E-value=0.049 Score=52.86 Aligned_cols=44 Identities=23% Similarity=0.309 Sum_probs=39.8
Q ss_pred CCCcceEEEECCCchHHHHhhcccc-CCCeEEEec--------cCCCCCCccc
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSV-DGLKVLHMD--------RNDYYGGESS 44 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~-~G~~V~vlE--------~~~~~GG~~~ 44 (419)
|.+++||+|||||++|++||..|++ .|++|+|+| +.+.+||.|.
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~ 56 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCV 56 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHH
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeee
Confidence 6667999999999999999999999 999999999 4678899765
No 286
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=94.60 E-value=0.054 Score=52.63 Aligned_cols=40 Identities=18% Similarity=0.263 Sum_probs=37.5
Q ss_pred cceEEEECCCchHHHHhhccccC---CCeEEEeccCCCCCCccc
Q 014768 4 EYDVIVLGTGLKECILSGLLSVD---GLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~---G~~V~vlE~~~~~GG~~~ 44 (419)
++||||||||++|++||..|++. |++|+|+|+++ +||.|.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~ 44 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAV 44 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCccc
Confidence 48999999999999999999999 99999999999 999764
No 287
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=94.58 E-value=0.062 Score=50.39 Aligned_cols=36 Identities=25% Similarity=0.436 Sum_probs=34.1
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (419)
++||+|||||++||++|..|+++|++|+|+||++.+
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~ 41 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRE 41 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 589999999999999999999999999999998765
No 288
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=94.57 E-value=0.021 Score=55.08 Aligned_cols=37 Identities=16% Similarity=0.182 Sum_probs=34.1
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (419)
.+++|||+|..|+-+|..|++.|.+|+++|+.+.+..
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 211 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP 211 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc
Confidence 4799999999999999999999999999999987654
No 289
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=94.55 E-value=0.022 Score=51.24 Aligned_cols=37 Identities=19% Similarity=0.252 Sum_probs=31.8
Q ss_pred CCCcceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
|++..+|.|||+|..|...|..|++.|++|+++++++
T Consensus 1 M~~~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 1 MEKSIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp ---CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 6666789999999999999999999999999999864
No 290
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=94.54 E-value=0.025 Score=51.69 Aligned_cols=35 Identities=23% Similarity=0.259 Sum_probs=32.9
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (419)
.+|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~ 190 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEF 190 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcC
Confidence 57999999999999999999999999999998876
No 291
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=94.52 E-value=0.026 Score=51.45 Aligned_cols=35 Identities=14% Similarity=0.160 Sum_probs=32.5
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (419)
.+|+|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~ 187 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQF 187 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCcc
Confidence 47999999999999999999999999999998765
No 292
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=94.52 E-value=0.018 Score=53.50 Aligned_cols=32 Identities=25% Similarity=0.280 Sum_probs=30.3
Q ss_pred eEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 6 dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
+|.|||+|..|...|..|+++|++|+++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999999864
No 293
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=94.51 E-value=0.022 Score=54.23 Aligned_cols=35 Identities=20% Similarity=0.319 Sum_probs=32.5
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
...+.|||.|.-|+..|..|+++|++|+++++++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 36799999999999999999999999999999875
No 294
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=94.50 E-value=0.025 Score=53.31 Aligned_cols=39 Identities=18% Similarity=0.215 Sum_probs=35.3
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcc
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGES 43 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~ 43 (419)
.+++|||+|..|+-+|..|++.|.+|+++|+.+.+..+.
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~ 181 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARV 181 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhc
Confidence 479999999999999999999999999999998876543
No 295
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=94.48 E-value=0.021 Score=51.68 Aligned_cols=33 Identities=21% Similarity=0.268 Sum_probs=30.8
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
.+|.|||+|..|...|..|+++|++|+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 479999999999999999999999999999864
No 296
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=94.47 E-value=0.02 Score=55.17 Aligned_cols=37 Identities=19% Similarity=0.237 Sum_probs=32.9
Q ss_pred CCCcceEEEECCCchHHHHhhccccC--CCeEEEeccCC
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVD--GLKVLHMDRND 37 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~--G~~V~vlE~~~ 37 (419)
|++..+|.|||+|..|+..|..|+++ |++|+++++++
T Consensus 2 M~~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CCCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCCccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 55456899999999999999999999 89999999864
No 297
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.46 E-value=0.024 Score=51.33 Aligned_cols=34 Identities=29% Similarity=0.273 Sum_probs=31.9
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
.+|.|||.|..|...|..|+++|++|+++++++.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 5799999999999999999999999999999764
No 298
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=94.46 E-value=0.054 Score=52.04 Aligned_cols=43 Identities=30% Similarity=0.434 Sum_probs=38.0
Q ss_pred CCC-cceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 1 MDE-EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 1 m~~-~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
|++ ++||+|||||++|++||..|+++|++|+|+|| +.+||.|.
T Consensus 1 M~~~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~ 44 (463)
T 4dna_A 1 MSAFDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCV 44 (463)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHH
T ss_pred CCCCCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCccc
Confidence 543 69999999999999999999999999999999 78998764
No 299
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=94.43 E-value=0.026 Score=53.38 Aligned_cols=40 Identities=15% Similarity=0.162 Sum_probs=35.8
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcc
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGES 43 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~ 43 (419)
..+++|||+|..|+-+|..|++.|.+|+++|+.+.+-.+.
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~ 191 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARV 191 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhh
Confidence 3579999999999999999999999999999998875543
No 300
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=94.40 E-value=0.021 Score=55.02 Aligned_cols=35 Identities=23% Similarity=0.271 Sum_probs=32.0
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
..+|.|||+|..|...|..|+++|++|+++|+++.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 39 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAE 39 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 45799999999999999999999999999998753
No 301
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.38 E-value=0.022 Score=54.22 Aligned_cols=34 Identities=18% Similarity=0.328 Sum_probs=32.1
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
.+|.|||+|..|...|..|+++|++|+++|+++.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 4799999999999999999999999999999876
No 302
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=94.38 E-value=0.06 Score=51.98 Aligned_cols=42 Identities=24% Similarity=0.370 Sum_probs=37.9
Q ss_pred CCcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 2 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 2 ~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
+.++||+|||||++|++||..|++.|++|+|+|++ .+||.|.
T Consensus 9 ~~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~ 50 (479)
T 2hqm_A 9 TKHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCV 50 (479)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHH
T ss_pred cccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCc
Confidence 34699999999999999999999999999999998 6888765
No 303
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=94.34 E-value=0.025 Score=54.51 Aligned_cols=36 Identities=14% Similarity=-0.021 Sum_probs=33.0
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~G 40 (419)
.+|+|||+|.+|+-+|..|++.|.+|+++++.+.+-
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~ 233 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPM 233 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCC
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCC
Confidence 479999999999999999999999999999987653
No 304
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=94.32 E-value=0.079 Score=50.70 Aligned_cols=38 Identities=32% Similarity=0.553 Sum_probs=35.1
Q ss_pred CCcceEEEECCCchHHHHhhccccCCCeEEEeccCCCC
Q 014768 2 DEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (419)
Q Consensus 2 ~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (419)
+.++||+|||||++|+++|..|+++|++|+|+||++.+
T Consensus 4 ~~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~ 41 (453)
T 3atr_A 4 ELKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWN 41 (453)
T ss_dssp EEECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGG
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 34689999999999999999999999999999998864
No 305
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=94.30 E-value=0.03 Score=53.78 Aligned_cols=33 Identities=21% Similarity=0.220 Sum_probs=30.9
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
.+|.|||+|..|...|..|+++|++|+++|+++
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999875
No 306
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=94.29 E-value=0.026 Score=52.17 Aligned_cols=34 Identities=24% Similarity=0.262 Sum_probs=31.5
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
..+|.|||+|.-|.+.|..|+++|++|+++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3589999999999999999999999999999864
No 307
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=94.27 E-value=0.12 Score=42.20 Aligned_cols=54 Identities=20% Similarity=0.178 Sum_probs=43.7
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~~ 289 (419)
..+.+.+.+.+++.|++++++ +|++|..+ ++. ..|++ +| ++.||.||.+.+..|
T Consensus 56 ~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~-~~~-~~v~~~~g-~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 56 EELLRRLEAHARRYGAEVRPG-VVKGVRDM-GGV-FEVETEEG-VEKAERLLLCTHKDP 110 (180)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CCCEEEEC-SSS-EEEECSSC-EEEEEEEEECCTTCC
T ss_pred HHHHHHHHHHHHHcCCEEEeC-EEEEEEEc-CCE-EEEEECCC-EEEECEEEECCCCCC
Confidence 457788888889999999999 99999974 554 35666 56 899999999887766
No 308
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=94.24 E-value=0.089 Score=47.49 Aligned_cols=43 Identities=14% Similarity=0.222 Sum_probs=38.3
Q ss_pred CCCcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
|++.+||+|||||++|+++|..|+++|++|+|+|+. .+||.+.
T Consensus 2 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~ 44 (320)
T 1trb_A 2 TTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLT 44 (320)
T ss_dssp CEEEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGG
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEe
Confidence 456789999999999999999999999999999975 7888764
No 309
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=94.22 E-value=0.069 Score=51.63 Aligned_cols=41 Identities=22% Similarity=0.349 Sum_probs=37.9
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcccc
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSS 45 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~t 45 (419)
++||+|||||++||+||..|+++|++|+|+|| +.+||.|..
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~ 66 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVI 66 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceec
Confidence 68999999999999999999999999999999 788887653
No 310
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=94.21 E-value=0.031 Score=50.64 Aligned_cols=35 Identities=20% Similarity=0.144 Sum_probs=32.6
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (419)
.+|+|||+|..|+-.|..|++.|.+|+++++.+.+
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~ 190 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKY 190 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCcc
Confidence 47999999999999999999999999999998766
No 311
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=94.21 E-value=0.063 Score=52.05 Aligned_cols=40 Identities=13% Similarity=0.218 Sum_probs=35.8
Q ss_pred CCCcceEEEECCCchHHHHhhccccC--CCeEEEeccCCCCC
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVD--GLKVLHMDRNDYYG 40 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~--G~~V~vlE~~~~~G 40 (419)
|+.++||||||||++|++||..|+++ |.+|+|+|+++.++
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~ 49 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELP 49 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCC
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCC
Confidence 45679999999999999999988876 89999999998765
No 312
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.17 E-value=0.031 Score=47.69 Aligned_cols=33 Identities=15% Similarity=0.127 Sum_probs=30.7
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~ 36 (419)
...|+|||||-.|...|..|.++|.+|+|++..
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 467999999999999999999999999999875
No 313
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=94.17 E-value=0.031 Score=50.60 Aligned_cols=35 Identities=26% Similarity=0.348 Sum_probs=31.9
Q ss_pred CcceEEEECCCchHHHHhhccccCCC-eEEEeccCC
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~-~V~vlE~~~ 37 (419)
+..+|.|||+|..|.+.|..|++.|+ +|+++|.++
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~ 42 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQ 42 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccc
Confidence 34689999999999999999999999 999999973
No 314
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.16 E-value=0.029 Score=52.37 Aligned_cols=35 Identities=17% Similarity=0.117 Sum_probs=32.1
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
..+|+|||+|..|+.+|..|...|.+|+++|+++.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 35899999999999999999999999999999864
No 315
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=94.12 E-value=0.022 Score=56.15 Aligned_cols=35 Identities=20% Similarity=0.268 Sum_probs=32.4
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (419)
.+|+|||+|.+|+-+|..|++.|.+|+|+++.+..
T Consensus 192 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANY 226 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCc
Confidence 47999999999999999999999999999998763
No 316
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=94.12 E-value=0.029 Score=53.56 Aligned_cols=32 Identities=25% Similarity=0.482 Sum_probs=30.2
Q ss_pred eEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 6 dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
+|.|||+|..|+..|..|+++|++|+++++++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999999864
No 317
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.12 E-value=0.019 Score=50.62 Aligned_cols=35 Identities=14% Similarity=0.097 Sum_probs=32.0
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
...|+|||+|-.|+..|..|.+.|.+|+|++.+..
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~~ 47 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDLH 47 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEEC
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 46799999999999999999999999999998653
No 318
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.11 E-value=0.028 Score=51.39 Aligned_cols=33 Identities=21% Similarity=0.300 Sum_probs=31.1
Q ss_pred ceEEEECCCchHHHHhhccccCCC-eEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~-~V~vlE~~~ 37 (419)
.+|+|||||-.|.+.|..|++.|+ +|+++|.+.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 589999999999999999999998 999999975
No 319
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=94.09 E-value=0.03 Score=54.07 Aligned_cols=36 Identities=28% Similarity=0.321 Sum_probs=33.5
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~G 40 (419)
.+++|||+|..|+-+|..|++.|.+|+++++.+.+.
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l 223 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL 223 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc
Confidence 479999999999999999999999999999988765
No 320
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=94.08 E-value=0.024 Score=54.99 Aligned_cols=37 Identities=27% Similarity=0.254 Sum_probs=34.1
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (419)
.+++|||+|..|+-+|..|++.|.+|+++|+.+.+..
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~ 235 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG 235 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc
Confidence 4799999999999999999999999999999988754
No 321
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=94.06 E-value=0.031 Score=53.49 Aligned_cols=35 Identities=14% Similarity=-0.017 Sum_probs=32.5
Q ss_pred ceEEEECCCchHHHHhhccccCCCe-EEEeccCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLK-VLHMDRNDYY 39 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~-V~vlE~~~~~ 39 (419)
.+|+|||+|.+|+-.|..|++.|.+ |+++++.+.+
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~ 248 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD 248 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc
Confidence 4799999999999999999999999 9999998765
No 322
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=94.01 E-value=0.037 Score=53.25 Aligned_cols=38 Identities=13% Similarity=0.230 Sum_probs=34.6
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCc
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~ 42 (419)
.+++|||+|..|+-+|..|++.|.+|+++|+.+.+...
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 210 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALIT 210 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCC
Confidence 47999999999999999999999999999999877544
No 323
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=93.99 E-value=0.036 Score=53.14 Aligned_cols=38 Identities=16% Similarity=0.033 Sum_probs=34.5
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCc
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~ 42 (419)
.+++|||+|..|+-+|..|++.|.+|+++|+.+.+...
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~ 185 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPK 185 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccc
Confidence 47999999999999999999999999999999876543
No 324
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=93.89 E-value=0.02 Score=51.47 Aligned_cols=33 Identities=15% Similarity=0.171 Sum_probs=30.8
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
.+|.|||+|--|.+.|..|+++|++|++++++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 479999999999999999999999999999974
No 325
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=93.87 E-value=0.036 Score=52.39 Aligned_cols=33 Identities=18% Similarity=0.203 Sum_probs=30.3
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
.+|.|||+|..|+..|..|++ |++|+++|+++.
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 589999999999999999998 999999998753
No 326
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=93.85 E-value=0.095 Score=50.36 Aligned_cols=43 Identities=23% Similarity=0.312 Sum_probs=40.1
Q ss_pred CCCcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
|+.++||+|||||++|++||..|++.|++|+|+|++ .+||.|.
T Consensus 1 M~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~ 43 (467)
T 1zk7_A 1 MEPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCV 43 (467)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCcccc
Confidence 777899999999999999999999999999999998 7888765
No 327
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=93.85 E-value=0.017 Score=49.53 Aligned_cols=35 Identities=11% Similarity=0.163 Sum_probs=31.2
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEE-eccCCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLH-MDRNDY 38 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~v-lE~~~~ 38 (419)
..+|.|||+|..|...|..|+++|++|++ +++++.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~ 58 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPA 58 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHH
Confidence 35899999999999999999999999999 888643
No 328
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=93.75 E-value=0.038 Score=50.25 Aligned_cols=33 Identities=18% Similarity=0.267 Sum_probs=30.8
Q ss_pred ceEEEECCCchHHHHhhccccCCC--eEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~--~V~vlE~~~ 37 (419)
.+|+|||+|-.|...|..|+++|+ +|++++++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 589999999999999999999998 999999964
No 329
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=93.73 E-value=0.037 Score=49.51 Aligned_cols=34 Identities=18% Similarity=0.182 Sum_probs=31.5
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
.+|.|||+|..|...|..|+++|++|+++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 3799999999999999999999999999999764
No 330
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=93.73 E-value=0.11 Score=52.28 Aligned_cols=42 Identities=19% Similarity=0.196 Sum_probs=37.7
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
.++||||||||++||+||+.|+++|.+|+||||.+..+|.+.
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~~g~s~ 45 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVKRSHSA 45 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGGGSGGG
T ss_pred ccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCCCCccc
Confidence 358999999999999999999999999999999987766543
No 331
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=93.72 E-value=0.038 Score=50.15 Aligned_cols=35 Identities=23% Similarity=0.172 Sum_probs=31.8
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
..+|.|||+|..|...|..|++.|++|+++++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 36799999999999999999999999999998754
No 332
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=93.71 E-value=0.032 Score=50.85 Aligned_cols=37 Identities=16% Similarity=0.192 Sum_probs=31.5
Q ss_pred CCCcceEEEECCCchHHHHhhccccCC----CeEEEeccCC
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDG----LKVLHMDRND 37 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G----~~V~vlE~~~ 37 (419)
|++..+|.|||+|..|...|..|+++| ++|+++++++
T Consensus 19 ~~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 19 YFQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp ---CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 344568999999999999999999999 8999999876
No 333
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=93.69 E-value=0.039 Score=50.57 Aligned_cols=34 Identities=26% Similarity=0.434 Sum_probs=31.2
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
..+|.|||+|-.|...|..|+++|++|+++++++
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 3689999999999999999999999999999863
No 334
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=93.69 E-value=0.12 Score=50.77 Aligned_cols=40 Identities=8% Similarity=0.150 Sum_probs=35.1
Q ss_pred CCCcceEEEECCCchHHHHhhcccc---CCCeEEEeccCCCCC
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSV---DGLKVLHMDRNDYYG 40 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~---~G~~V~vlE~~~~~G 40 (419)
|++.+||||||||++|+++|+.|++ +|.+|+|||+.+.+.
T Consensus 2 ~~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~ 44 (538)
T 2aqj_A 2 NKPIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIPR 44 (538)
T ss_dssp CCBCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSCC
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCCC
Confidence 1456899999999999999999999 999999999976543
No 335
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=93.66 E-value=0.049 Score=49.72 Aligned_cols=34 Identities=21% Similarity=0.273 Sum_probs=30.6
Q ss_pred ceEEEECCCchHHH-HhhccccCCCeEEEeccCCC
Q 014768 5 YDVIVLGTGLKECI-LSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~-aA~~La~~G~~V~vlE~~~~ 38 (419)
.+|.|||.|-+|++ +|..|.++|++|++.|+++.
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 47999999999997 77889999999999999765
No 336
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=93.66 E-value=0.04 Score=49.69 Aligned_cols=34 Identities=21% Similarity=0.184 Sum_probs=31.6
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
..+|.|||.|..|...|..|+++|++|+++++++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999875
No 337
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.64 E-value=0.042 Score=47.89 Aligned_cols=35 Identities=29% Similarity=0.308 Sum_probs=31.8
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
..+|.|||+|..|...|..|+++|++|+++++++.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 35799999999999999999999999999998653
No 338
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.59 E-value=0.16 Score=49.26 Aligned_cols=40 Identities=25% Similarity=0.376 Sum_probs=37.0
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCccc
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESS 44 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~~ 44 (419)
++||+|||||.+|++||..|++.|++|+|+|++ .+||.|.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~c~ 41 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKS-RLGGTCV 41 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTHHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CcCcccc
Confidence 489999999999999999999999999999998 4788764
No 339
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=93.57 E-value=0.13 Score=45.83 Aligned_cols=56 Identities=11% Similarity=-0.010 Sum_probs=44.0
Q ss_pred CcHHHHHHHHHHH-cCcEEEcCCccceEEEcCCCcEEEEEe----------CC-----eEEEcCEEEeCCCCC
Q 014768 232 GELPQAFARLSAV-YGGTYMLNKPECKVEFDEEGKVVGVTS----------EG-----ETAKCKKVVCDPSYL 288 (419)
Q Consensus 232 ~~l~~al~~~~~~-~G~~i~~~~~V~~I~~~~~~~v~gV~~----------~g-----~~i~ad~VV~~~~~~ 288 (419)
..+...|.+.+.+ .|++++++++|++|..+ ++++.+|.+ +| .+++||.||.+.+..
T Consensus 119 ~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~-~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~ 190 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHD 190 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEEEETEEEEEEEEE-TTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSS
T ss_pred HHHHHHHHHHHHhcCCCEEEcCcEEEEEEec-CCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCc
Confidence 4577778777765 69999999999999984 788877765 22 679999999877643
No 340
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=93.56 E-value=0.036 Score=52.47 Aligned_cols=33 Identities=24% Similarity=0.278 Sum_probs=31.0
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
.++.|||.|..||..|..||++|++|+.+|-++
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 579999999999999999999999999999864
No 341
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=93.56 E-value=0.14 Score=49.49 Aligned_cols=38 Identities=8% Similarity=0.238 Sum_probs=34.6
Q ss_pred ceEEEECCCchHHHHhhccccC--CCeEEEeccCCCCCCc
Q 014768 5 YDVIVLGTGLKECILSGLLSVD--GLKVLHMDRNDYYGGE 42 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~--G~~V~vlE~~~~~GG~ 42 (419)
+||+|||||++|++||..|++. |.+|+|+|+++..|+.
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~ 76 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYA 76 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBC
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCC
Confidence 5999999999999999999986 8999999999887643
No 342
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=93.56 E-value=0.044 Score=49.51 Aligned_cols=32 Identities=19% Similarity=0.146 Sum_probs=30.0
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
.+|.|||+|-.|...|..|+ +|++|+++.+++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 48999999999999999999 999999999875
No 343
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=93.52 E-value=0.042 Score=49.96 Aligned_cols=32 Identities=25% Similarity=0.563 Sum_probs=29.5
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
.+|.|||+|--|...|..|+++|++|+++ +++
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 57999999999999999999999999999 654
No 344
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=93.52 E-value=0.046 Score=49.39 Aligned_cols=35 Identities=31% Similarity=0.461 Sum_probs=32.0
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
..+|.|||.|..|...|..|+++|++|+++++++.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 43 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPG 43 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35799999999999999999999999999998753
No 345
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=93.51 E-value=0.048 Score=49.75 Aligned_cols=33 Identities=21% Similarity=0.323 Sum_probs=31.0
Q ss_pred ceEEEECCCchHHHHhhccccCCC-eEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~-~V~vlE~~~ 37 (419)
.+|.|||||..|...|..|+++|+ +|+++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 589999999999999999999998 999999975
No 346
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.49 E-value=0.035 Score=51.36 Aligned_cols=34 Identities=21% Similarity=0.152 Sum_probs=31.4
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
..+|+|||+|..|+.+|..|...|.+|+++|+++
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3589999999999999999999999999999975
No 347
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=93.46 E-value=0.032 Score=53.63 Aligned_cols=36 Identities=11% Similarity=0.059 Sum_probs=32.5
Q ss_pred cceEEEECCCchHHHHhhccccC--CCeEEEeccCCCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVD--GLKVLHMDRNDYY 39 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~--G~~V~vlE~~~~~ 39 (419)
..+|+|||+|.+|+-+|..|++. |.+|+++++.+.+
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~ 264 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASAL 264 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSC
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCC
Confidence 45899999999999999999998 8999999997653
No 348
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=93.45 E-value=0.17 Score=50.24 Aligned_cols=39 Identities=26% Similarity=0.278 Sum_probs=34.9
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCC-CCCC
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND-YYGG 41 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~-~~GG 41 (419)
.++||||||||++|+.||..|++.|.+|+|+|++. .+|+
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~ 65 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQ 65 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCC
Confidence 35899999999999999999999999999999984 4553
No 349
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=93.44 E-value=0.053 Score=49.30 Aligned_cols=33 Identities=21% Similarity=0.257 Sum_probs=31.1
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
.+|.|||.|..|...|..|+++|++|+++++++
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 479999999999999999999999999999875
No 350
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=93.40 E-value=0.037 Score=55.14 Aligned_cols=32 Identities=25% Similarity=0.265 Sum_probs=30.4
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~ 36 (419)
-+|+|||||..|+-+|..|++.|.+|+++++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 36999999999999999999999999999997
No 351
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=93.38 E-value=0.048 Score=51.35 Aligned_cols=31 Identities=29% Similarity=0.263 Sum_probs=29.2
Q ss_pred eEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 6 dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
+|.|||+|..|+..|..|++ |++|+++++++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 69999999999999999999 99999999864
No 352
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=93.36 E-value=0.053 Score=53.88 Aligned_cols=38 Identities=16% Similarity=0.171 Sum_probs=34.6
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCc
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGE 42 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~ 42 (419)
.+++|||+|..|+-+|..|++.|.+|+++|+.+.+...
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~ 225 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP 225 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc
Confidence 47999999999999999999999999999998876544
No 353
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.26 E-value=0.05 Score=49.05 Aligned_cols=32 Identities=28% Similarity=0.424 Sum_probs=30.2
Q ss_pred eEEEECCCchHHHHhhccccCCC--eEEEeccCC
Q 014768 6 DVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (419)
Q Consensus 6 dvvIIGaGi~Gl~aA~~La~~G~--~V~vlE~~~ 37 (419)
+|+|||+|..|.+.|..|+.+|+ +|+++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 69999999999999999999998 999999974
No 354
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=93.20 E-value=0.038 Score=47.71 Aligned_cols=34 Identities=9% Similarity=0.019 Sum_probs=30.4
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
..+++|+|+|-.|...|..|.+.|+ |+++|+++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 3579999999999999999999999 999998753
No 355
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=93.20 E-value=0.18 Score=50.20 Aligned_cols=38 Identities=24% Similarity=0.334 Sum_probs=34.5
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCC-CCC
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND-YYG 40 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~-~~G 40 (419)
.++||||||||++|++||+.|++.|.+|+|+|++. .+|
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG 65 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLG 65 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccc
Confidence 46999999999999999999999999999999984 444
No 356
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=93.14 E-value=0.041 Score=53.83 Aligned_cols=36 Identities=17% Similarity=-0.057 Sum_probs=33.4
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~G 40 (419)
.+|+|||+|..|+-+|..|++.|.+|+++++.+.+.
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~ 391 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK 391 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC
Confidence 479999999999999999999999999999988764
No 357
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=93.13 E-value=0.2 Score=48.96 Aligned_cols=37 Identities=24% Similarity=0.417 Sum_probs=33.9
Q ss_pred CcceEEEECCCchHHHHhhcccc------------CCCeEEEeccCCCC
Q 014768 3 EEYDVIVLGTGLKECILSGLLSV------------DGLKVLHMDRNDYY 39 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~------------~G~~V~vlE~~~~~ 39 (419)
..+||||||||++|+++|..|++ +|.+|+|+|+.+.+
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~ 54 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVA 54 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCC
Confidence 46899999999999999999999 99999999997653
No 358
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=93.07 E-value=0.06 Score=48.44 Aligned_cols=33 Identities=15% Similarity=0.138 Sum_probs=30.9
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
.+|.|||+|..|...|..|+++|++|+++++++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 479999999999999999999999999999874
No 359
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.05 E-value=0.04 Score=51.97 Aligned_cols=35 Identities=29% Similarity=0.359 Sum_probs=32.1
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
+.+|||||.|-.|...|..|.+.|++|+++|+++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 35799999999999999999999999999999754
No 360
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=93.05 E-value=0.047 Score=49.61 Aligned_cols=33 Identities=15% Similarity=0.139 Sum_probs=31.3
Q ss_pred ceEEEECCCchHHHHhhccccCC-CeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDG-LKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G-~~V~vlE~~~ 37 (419)
.+|.|||.|..|...|..|+++| ++|+++++++
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 47999999999999999999999 9999999985
No 361
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=93.04 E-value=0.036 Score=50.26 Aligned_cols=31 Identities=26% Similarity=0.424 Sum_probs=29.4
Q ss_pred ceEEEECCCchHHHHhhccccC-----C-CeEEEecc
Q 014768 5 YDVIVLGTGLKECILSGLLSVD-----G-LKVLHMDR 35 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~-----G-~~V~vlE~ 35 (419)
.+|.|||+|..|...|..|+++ | ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 5899999999999999999999 9 99999987
No 362
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=93.00 E-value=0.037 Score=47.51 Aligned_cols=34 Identities=15% Similarity=0.145 Sum_probs=31.1
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
..+|.|||+|..|.+.|..|+++|++|+++++..
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~~ 39 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAPE 39 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSGG
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCHH
Confidence 3589999999999999999999999999998853
No 363
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=92.99 E-value=0.043 Score=50.15 Aligned_cols=30 Identities=30% Similarity=0.226 Sum_probs=29.0
Q ss_pred eEEEECCCchHHHHhhccccCCCeEEEecc
Q 014768 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDR 35 (419)
Q Consensus 6 dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~ 35 (419)
+|.|||+|..|...|..|+++|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 699999999999999999999999999998
No 364
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=92.98 E-value=0.065 Score=45.32 Aligned_cols=32 Identities=28% Similarity=0.249 Sum_probs=29.7
Q ss_pred eEEEEC-CCchHHHHhhccccCCCeEEEeccCC
Q 014768 6 DVIVLG-TGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 6 dvvIIG-aGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
+|.||| +|..|...|..|+++|++|+++++++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 689999 99999999999999999999999863
No 365
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=92.98 E-value=0.041 Score=49.15 Aligned_cols=33 Identities=24% Similarity=0.249 Sum_probs=31.1
Q ss_pred eEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 6 dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
+|.|||.|..|...|..|+++|++|+++++++.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 699999999999999999999999999999864
No 366
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=92.98 E-value=0.056 Score=46.03 Aligned_cols=33 Identities=33% Similarity=0.290 Sum_probs=30.5
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
.++.|||+|..|...|..|+++|++|++++++.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999864
No 367
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=92.91 E-value=0.061 Score=50.86 Aligned_cols=34 Identities=26% Similarity=0.322 Sum_probs=31.4
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
.+.-|||.|.-|+..|..|+++|++|+++|+++.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~ 45 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQ 45 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 4688999999999999999999999999999753
No 368
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=92.88 E-value=0.062 Score=52.02 Aligned_cols=33 Identities=24% Similarity=0.241 Sum_probs=30.8
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
-+++|||+|..|+-.|..|++.|.+|+++++..
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 218 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRSI 218 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc
Confidence 369999999999999999999999999999864
No 369
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=92.88 E-value=0.062 Score=52.49 Aligned_cols=32 Identities=28% Similarity=0.320 Sum_probs=30.1
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~ 36 (419)
-+++|||+|..|+-.|..|++.|.+|+++++.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 36999999999999999999999999999985
No 370
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=92.83 E-value=0.065 Score=48.48 Aligned_cols=32 Identities=16% Similarity=0.217 Sum_probs=29.6
Q ss_pred eEEEECCCchHHHHhhccccC--CCeEEEeccCC
Q 014768 6 DVIVLGTGLKECILSGLLSVD--GLKVLHMDRND 37 (419)
Q Consensus 6 dvvIIGaGi~Gl~aA~~La~~--G~~V~vlE~~~ 37 (419)
+|.|||+|..|.+.|..|+++ |++|+++|+++
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 699999999999999999985 79999999975
No 371
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=92.82 E-value=0.071 Score=48.40 Aligned_cols=34 Identities=21% Similarity=0.402 Sum_probs=31.6
Q ss_pred cceEEEECCCchHHHHhhccccCCC-eEEEeccCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~-~V~vlE~~~ 37 (419)
..+|.|||+|-.|.+.|..|+..|+ +|+++|.++
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 4689999999999999999999998 999999976
No 372
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=92.80 E-value=0.053 Score=50.09 Aligned_cols=34 Identities=26% Similarity=0.322 Sum_probs=31.5
Q ss_pred cceEEEECCCchHHHHhhccccCCC-eEEEeccCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~-~V~vlE~~~ 37 (419)
+.+|||+|||.+|+.+|..|...|. +|+++|++.
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 4689999999999999999999998 999999985
No 373
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=92.77 E-value=0.086 Score=46.86 Aligned_cols=33 Identities=9% Similarity=-0.063 Sum_probs=30.7
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
.+|+|||+|..|+-+|..|++.| +|+++++.+.
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~ 174 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV 174 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC
T ss_pred CEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC
Confidence 47999999999999999999999 9999998765
No 374
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=92.74 E-value=0.051 Score=49.21 Aligned_cols=33 Identities=15% Similarity=0.195 Sum_probs=31.0
Q ss_pred ceEEEECCCchHHHHhhccccCCC-eEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~-~V~vlE~~~ 37 (419)
.+|.|||.|..|...|..|+++|+ +|++++++.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAAS 58 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 579999999999999999999999 999999963
No 375
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=92.70 E-value=0.074 Score=47.78 Aligned_cols=35 Identities=26% Similarity=0.220 Sum_probs=32.9
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (419)
.+++|||+|..|+-+|..|++.|.+|+++++.+.+
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF 182 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence 47999999999999999999999999999998876
No 376
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=92.67 E-value=0.068 Score=47.99 Aligned_cols=33 Identities=18% Similarity=0.294 Sum_probs=27.5
Q ss_pred eEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 6 dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
+|.+||-|..|...|..|.++|++|+++++++.
T Consensus 7 kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 7 KIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred cEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 699999999999999999999999999998764
No 377
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=92.65 E-value=0.067 Score=51.54 Aligned_cols=35 Identities=17% Similarity=0.190 Sum_probs=31.6
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
.+.+|.|||+|..|...|..|+++|++|+++++++
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 34689999999999999999999999999999864
No 378
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=92.64 E-value=0.066 Score=48.30 Aligned_cols=37 Identities=27% Similarity=0.256 Sum_probs=34.1
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (419)
.+|+|||+|..|+-+|..|++.|.+|+++++.+.+..
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~ 191 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA 191 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc
Confidence 5799999999999999999999999999999987654
No 379
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=92.63 E-value=0.076 Score=47.97 Aligned_cols=33 Identities=15% Similarity=0.346 Sum_probs=30.5
Q ss_pred ceEEEECCCchHHHHhhccccCCC-eEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~-~V~vlE~~~ 37 (419)
.+|.|||+|-.|...|..|+..|+ +|.++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 479999999999999999999996 999999874
No 380
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=92.59 E-value=0.072 Score=47.87 Aligned_cols=33 Identities=21% Similarity=0.525 Sum_probs=30.8
Q ss_pred eEEEEC-CCchHHHHhhccccCCCeEEEeccCCC
Q 014768 6 DVIVLG-TGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 6 dvvIIG-aGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
+|.||| +|..|.+.|..|+++|++|+++++++.
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 699999 999999999999999999999998754
No 381
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=92.58 E-value=0.071 Score=48.40 Aligned_cols=34 Identities=12% Similarity=0.213 Sum_probs=30.9
Q ss_pred cceEEEECCCchHHHHhhccccCCC--eEEEeccCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~--~V~vlE~~~ 37 (419)
..+|+|||+|-.|.+.|..|+..|. +|.++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4789999999999999999999997 999999874
No 382
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=92.57 E-value=0.091 Score=47.60 Aligned_cols=36 Identities=22% Similarity=0.212 Sum_probs=33.4
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYG 40 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~G 40 (419)
.+++|||+|..|+-+|..|++.|.+|+++++.+.+.
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~ 190 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFR 190 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCS
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCC
Confidence 479999999999999999999999999999988764
No 383
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=92.57 E-value=0.056 Score=50.95 Aligned_cols=30 Identities=37% Similarity=0.464 Sum_probs=28.1
Q ss_pred ceEEEECCCchHHHHhhcccc-CCCeEEEec
Q 014768 5 YDVIVLGTGLKECILSGLLSV-DGLKVLHMD 34 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~-~G~~V~vlE 34 (419)
.+|.|||+|..|.+.|..|++ +|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 479999999999999999998 599999999
No 384
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=92.57 E-value=0.062 Score=51.87 Aligned_cols=33 Identities=18% Similarity=0.285 Sum_probs=30.3
Q ss_pred ceEEEECCCchHHHHhhccccC--CCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVD--GLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~--G~~V~vlE~~~ 37 (419)
.+|.|||+|..|+..|..|+++ |++|+++++++
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4799999999999999999998 79999999864
No 385
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=92.55 E-value=0.064 Score=45.76 Aligned_cols=38 Identities=18% Similarity=0.301 Sum_probs=32.0
Q ss_pred CCCcceEEEECC-CchHHHHhhccccCCCeEEEeccCCC
Q 014768 1 MDEEYDVIVLGT-GLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 1 m~~~~dvvIIGa-Gi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
|.+...|+|+|| |..|...+..|.++|++|+++.+++.
T Consensus 1 M~~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 1 MEKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPE 39 (227)
T ss_dssp --CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGG
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcc
Confidence 555568999996 99999999999999999999999743
No 386
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=92.53 E-value=0.061 Score=51.83 Aligned_cols=37 Identities=14% Similarity=0.155 Sum_probs=33.9
Q ss_pred ceEEEECCCchHHHHhhccccC-CCeEEEeccCCCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVD-GLKVLHMDRNDYYGG 41 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~-G~~V~vlE~~~~~GG 41 (419)
.+++|||+|..|+-+|..|++. |.+|+++|+.+.+..
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~ 197 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMP 197 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSST
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccc
Confidence 5799999999999999999999 999999999887644
No 387
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=92.49 E-value=0.074 Score=50.99 Aligned_cols=35 Identities=26% Similarity=0.174 Sum_probs=31.7
Q ss_pred ceEEEECCCchHHHHhhccccCCC-eEEEeccCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGL-KVLHMDRNDYY 39 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~-~V~vlE~~~~~ 39 (419)
.+|+|||+|..|+-+|..|.+.|. +|+++++++..
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 479999999999999999999997 69999998765
No 388
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=92.46 E-value=0.16 Score=46.05 Aligned_cols=54 Identities=4% Similarity=-0.043 Sum_probs=42.0
Q ss_pred HHHHHHHHHHc-CcEEEcCCccceEEEcCCCcEEEEEe-C-----CeEEEcCEEEeCCCCCC
Q 014768 235 PQAFARLSAVY-GGTYMLNKPECKVEFDEEGKVVGVTS-E-----GETAKCKKVVCDPSYLP 289 (419)
Q Consensus 235 ~~al~~~~~~~-G~~i~~~~~V~~I~~~~~~~v~gV~~-~-----g~~i~ad~VV~~~~~~~ 289 (419)
.+.+.+.+.+. |++++++++|++|.. +++++.+|++ + ++++.||.||.++++.|
T Consensus 211 ~~~~~~~l~~~~gv~i~~~~~v~~i~~-~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 271 (338)
T 3itj_A 211 STIMQKRAEKNEKIEILYNTVALEAKG-DGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTP 271 (338)
T ss_dssp CHHHHHHHHHCTTEEEECSEEEEEEEE-SSSSEEEEEEEETTTTEEEEEECSEEEECSCEEE
T ss_pred CHHHHHHHHhcCCeEEeecceeEEEEc-ccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCC
Confidence 45555666565 999999999999998 4777777776 4 46899999999887654
No 389
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=92.40 E-value=0.069 Score=54.27 Aligned_cols=33 Identities=21% Similarity=0.329 Sum_probs=31.0
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
.+|.|||+|..|...|..|+++|++|+++|+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 369999999999999999999999999999875
No 390
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=92.40 E-value=0.064 Score=49.46 Aligned_cols=33 Identities=30% Similarity=0.404 Sum_probs=30.9
Q ss_pred cceEEEECCCchHHHHhhccccCCC-eEEEeccC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRN 36 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~-~V~vlE~~ 36 (419)
+.+|+|+|||-+|..+|..|...|. +|+++|++
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 4689999999999999999999997 89999997
No 391
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=92.38 E-value=0.21 Score=45.61 Aligned_cols=55 Identities=13% Similarity=0.096 Sum_probs=43.6
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEeCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSY 287 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~~g~~i~ad~VV~~~~~ 287 (419)
..+.+.+.+.+++.|++++++++|++|..+ ++++.+|+++++++.+|.||.+.+.
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~-~~~~~~v~~~~g~~~~d~vV~AtG~ 130 (357)
T 4a9w_A 76 AEVLAYLAQYEQKYALPVLRPIRVQRVSHF-GERLRVVARDGRQWLARAVISATGT 130 (357)
T ss_dssp HHHHHHHHHHHHHTTCCEECSCCEEEEEEE-TTEEEEEETTSCEEEEEEEEECCCS
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEC-CCcEEEEEeCCCEEEeCEEEECCCC
Confidence 456677778888899999999999999984 6655447774448999999987764
No 392
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.34 E-value=0.072 Score=50.06 Aligned_cols=34 Identities=24% Similarity=0.260 Sum_probs=31.2
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
..|+|||+|..|+.+|..|...|.+|+++|+++.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 5799999999999999999999999999998753
No 393
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=92.32 E-value=0.095 Score=47.54 Aligned_cols=34 Identities=21% Similarity=0.291 Sum_probs=31.4
Q ss_pred cceEEEECCCchHHHHhhccccCCC-eEEEeccCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~-~V~vlE~~~ 37 (419)
..+|.|||+|..|.+.|..|+..|. +|.++|.++
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 4689999999999999999999988 999999976
No 394
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=92.30 E-value=0.22 Score=49.48 Aligned_cols=40 Identities=10% Similarity=0.067 Sum_probs=36.5
Q ss_pred cceEEEECCCchHHHHhhccccCC--CeEEEeccCCCCCCcc
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDG--LKVLHMDRNDYYGGES 43 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G--~~V~vlE~~~~~GG~~ 43 (419)
++||||||||++||+||..|+++| .+|+||||.+..+|.+
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s 46 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHT 46 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGG
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChH
Confidence 589999999999999999999999 9999999998776643
No 395
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=92.25 E-value=0.22 Score=45.81 Aligned_cols=58 Identities=17% Similarity=0.179 Sum_probs=46.7
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe---CC--eEEEcCEEEeCCCCCCc
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS---EG--ETAKCKKVVCDPSYLPN 290 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~---~g--~~i~ad~VV~~~~~~~~ 290 (419)
..+.+.+.+..++.|++++++++|++|..+ ++++.+|++ +| +++.+|.||.++++.|.
T Consensus 202 ~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~ 264 (360)
T 3ab1_A 202 GKTAHEVERARANGTIDVYLETEVASIEES-NGVLTRVHLRSSDGSKWTVEADRLLILIGFKSN 264 (360)
T ss_dssp SHHHHSSHHHHHHTSEEEESSEEEEEEEEE-TTEEEEEEEEETTCCEEEEECSEEEECCCBCCS
T ss_pred HHHHHHHHHHhhcCceEEEcCcCHHHhccC-CCceEEEEEEecCCCeEEEeCCEEEECCCCCCC
Confidence 356777778888889999999999999974 777766665 66 68999999998877654
No 396
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=92.25 E-value=0.087 Score=47.25 Aligned_cols=33 Identities=27% Similarity=0.299 Sum_probs=30.7
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
.+|.|||+|..|...|..|++.|++|+++++++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 479999999999999999999999999999864
No 397
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=92.23 E-value=0.083 Score=50.75 Aligned_cols=35 Identities=17% Similarity=0.206 Sum_probs=32.3
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
...+|.|||.|..|...|..|+++|++|+++++++
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999999986
No 398
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=92.19 E-value=0.048 Score=50.32 Aligned_cols=35 Identities=11% Similarity=0.141 Sum_probs=32.2
Q ss_pred cceEEEECCCchHHHHhhccccCC-------CeEEEeccCCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDG-------LKVLHMDRNDY 38 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G-------~~V~vlE~~~~ 38 (419)
..+|.|||+|..|.+.|..|+++| ++|+++++++.
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 358999999999999999999999 99999999876
No 399
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=92.10 E-value=0.11 Score=46.72 Aligned_cols=32 Identities=31% Similarity=0.404 Sum_probs=28.8
Q ss_pred ceEEEECCC-chHHHHhhccccCCCeEEEeccC
Q 014768 5 YDVIVLGTG-LKECILSGLLSVDGLKVLHMDRN 36 (419)
Q Consensus 5 ~dvvIIGaG-i~Gl~aA~~La~~G~~V~vlE~~ 36 (419)
.+|+|||+| +.|..+|..|...|.+|+|++++
T Consensus 178 k~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 178 KKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 579999999 67999999999999999998664
No 400
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=92.07 E-value=0.1 Score=46.54 Aligned_cols=33 Identities=12% Similarity=0.178 Sum_probs=30.7
Q ss_pred ceEEEECC-CchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGT-GLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGa-Gi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
.+|.|||+ |..|...|..|+++|++|+++++++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 37999999 9999999999999999999999864
No 401
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=92.00 E-value=0.23 Score=48.89 Aligned_cols=37 Identities=8% Similarity=0.149 Sum_probs=34.2
Q ss_pred ceEEEECCCchHHHHhhccccC--CCeEEEeccCCCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVD--GLKVLHMDRNDYYGG 41 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~--G~~V~vlE~~~~~GG 41 (419)
.||+|||||++||+||..|++. |++|+|+|+++.+|.
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~ 40 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSF 40 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSB
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccc
Confidence 3899999999999999999988 799999999998863
No 402
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=91.99 E-value=0.094 Score=46.94 Aligned_cols=32 Identities=19% Similarity=0.123 Sum_probs=30.1
Q ss_pred eEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 6 dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
+|.|||+|..|...|..|+++|++|+++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 68999999999999999999999999999875
No 403
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=91.98 E-value=0.093 Score=46.60 Aligned_cols=35 Identities=20% Similarity=0.252 Sum_probs=31.8
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
...|+|.|+|..|...+..|.++|++|+++.++..
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 35799999999999999999999999999998754
No 404
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.96 E-value=0.1 Score=46.11 Aligned_cols=33 Identities=15% Similarity=0.049 Sum_probs=30.3
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
..++|+|+|-.|..+|..|++.|.+|+|+.++.
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 479999999999999999999999999998863
No 405
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=91.90 E-value=0.091 Score=47.75 Aligned_cols=36 Identities=22% Similarity=0.376 Sum_probs=31.2
Q ss_pred CCC-cceEEEECCCchHHHHhhccccCCC--eEEEeccC
Q 014768 1 MDE-EYDVIVLGTGLKECILSGLLSVDGL--KVLHMDRN 36 (419)
Q Consensus 1 m~~-~~dvvIIGaGi~Gl~aA~~La~~G~--~V~vlE~~ 36 (419)
|++ ..+|.|||+|..|.+.|..|+..|. +|+++|.+
T Consensus 1 m~~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 1 MNKHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp -CCSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 543 4689999999999999999999997 99999985
No 406
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.90 E-value=0.096 Score=48.95 Aligned_cols=34 Identities=21% Similarity=0.175 Sum_probs=31.2
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
.+|+|||+|..|+.+|..|...|.+|+++|+++.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5799999999999999999999999999998753
No 407
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=91.89 E-value=0.097 Score=46.41 Aligned_cols=32 Identities=28% Similarity=0.412 Sum_probs=30.0
Q ss_pred eEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 6 dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
+|.|||+|..|.+.|..|++.|++|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 68999999999999999999999999999864
No 408
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=91.87 E-value=0.073 Score=46.70 Aligned_cols=35 Identities=9% Similarity=0.072 Sum_probs=31.9
Q ss_pred cceEEEECCCchHHHHhhccccCC----CeEEEeccCCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDG----LKVLHMDRNDY 38 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G----~~V~vlE~~~~ 38 (419)
..+|.|||+|..|...|..|+++| ++|+++++++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 458999999999999999999999 79999999875
No 409
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=91.81 E-value=0.11 Score=46.92 Aligned_cols=33 Identities=24% Similarity=0.422 Sum_probs=31.1
Q ss_pred ceEEEECCCchHHHHhhccccCCC--eEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~--~V~vlE~~~ 37 (419)
.+|.|||+|..|.+.|..|+++|+ +|+++++++
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 579999999999999999999999 999999976
No 410
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=91.73 E-value=0.098 Score=50.61 Aligned_cols=34 Identities=18% Similarity=0.131 Sum_probs=31.5
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
..+|.|||.|..|...|..|+++|++|+++++++
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999875
No 411
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=91.73 E-value=0.31 Score=47.68 Aligned_cols=57 Identities=9% Similarity=0.018 Sum_probs=44.4
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCC----cEEEEEeCC---eEEEcCEEEeCCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEG----KVVGVTSEG---ETAKCKKVVCDPSYLP 289 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~----~v~gV~~~g---~~i~ad~VV~~~~~~~ 289 (419)
..+.+.|.+.+++.|++|+++++|++|+.+ ++ .++....++ .+++||.||.+.+...
T Consensus 120 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~-~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 120 DKLEPILLAQARKHGGAIRFGTRLLSFRQH-DDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEE-CGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEC-CCCccccEEEEEEcCCCeEEEEeCEEEECCCCcc
Confidence 467888889999999999999999999985 54 444333354 7899999998776653
No 412
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=91.69 E-value=0.083 Score=48.00 Aligned_cols=32 Identities=16% Similarity=0.273 Sum_probs=30.0
Q ss_pred eEEEECCCchHHHHhhccccCCC--eEEEeccCC
Q 014768 6 DVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (419)
Q Consensus 6 dvvIIGaGi~Gl~aA~~La~~G~--~V~vlE~~~ 37 (419)
+|.|||+|-.|.+.|..|+++|+ +|+++|+++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 69999999999999999999999 999999864
No 413
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=91.64 E-value=0.087 Score=53.43 Aligned_cols=34 Identities=21% Similarity=0.193 Sum_probs=31.5
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
.+|.|||||..|...|..++.+|++|+++|.++.
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~~V~l~D~~~~ 350 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 350 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred cEEEEEcccHHHHHHHHHHHhCCCchhcccchHh
Confidence 4799999999999999999999999999998754
No 414
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=91.63 E-value=0.11 Score=50.13 Aligned_cols=34 Identities=18% Similarity=0.152 Sum_probs=31.5
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
..+|.|||+|..|...|..|+++|++|+++++++
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4689999999999999999999999999999864
No 415
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=91.63 E-value=0.087 Score=46.24 Aligned_cols=32 Identities=25% Similarity=0.420 Sum_probs=29.9
Q ss_pred eEEEECCCchHHHHhhccccCC-CeEEEeccCC
Q 014768 6 DVIVLGTGLKECILSGLLSVDG-LKVLHMDRND 37 (419)
Q Consensus 6 dvvIIGaGi~Gl~aA~~La~~G-~~V~vlE~~~ 37 (419)
+|.|||+|..|...|..|+++| ++|+++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 6999999999999999999999 9999999864
No 416
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.58 E-value=0.1 Score=48.23 Aligned_cols=33 Identities=24% Similarity=0.221 Sum_probs=30.7
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
..|+|+|+|-.|+.++..|...|.+|+++++++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999999864
No 417
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=91.55 E-value=0.089 Score=45.88 Aligned_cols=33 Identities=24% Similarity=0.428 Sum_probs=30.4
Q ss_pred ceEEEECCCchHHHHhhccccCCC-eEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~-~V~vlE~~~ 37 (419)
.+|+|||+|-.|..+|..|++.|. +++|+|...
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 579999999999999999999996 899999864
No 418
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=91.54 E-value=0.12 Score=49.54 Aligned_cols=46 Identities=17% Similarity=0.259 Sum_probs=34.6
Q ss_pred cCcEEEcCCccceEEEcCCC-cEEEEEe----------------CC--eEEEcCEEEeCCCCCCc
Q 014768 245 YGGTYMLNKPECKVEFDEEG-KVVGVTS----------------EG--ETAKCKKVVCDPSYLPN 290 (419)
Q Consensus 245 ~G~~i~~~~~V~~I~~~~~~-~v~gV~~----------------~g--~~i~ad~VV~~~~~~~~ 290 (419)
.|+++++++.+.+|.-++++ ++.+|++ +| +++.||.||.+.++.|.
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~ 334 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSR 334 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECC
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCC
Confidence 68999999999999863225 6666653 23 57999999999987664
No 419
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=91.53 E-value=0.13 Score=42.96 Aligned_cols=36 Identities=17% Similarity=0.224 Sum_probs=31.8
Q ss_pred CCCcceEEEECC-CchHHHHhhccccCCCeEEEeccCC
Q 014768 1 MDEEYDVIVLGT-GLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 1 m~~~~dvvIIGa-Gi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
|.. ..|+|+|| |..|...+..|.++|++|+++.+++
T Consensus 1 M~~-~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 1 MAV-KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CCC-CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCC-CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 543 57999998 9999999999999999999999864
No 420
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=91.51 E-value=0.12 Score=45.89 Aligned_cols=33 Identities=24% Similarity=0.451 Sum_probs=30.6
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
.+|+|+|||..|...+..|.++|++|+++.+++
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 479999999999999999999999999998864
No 421
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=91.45 E-value=0.11 Score=53.03 Aligned_cols=36 Identities=19% Similarity=0.176 Sum_probs=32.8
Q ss_pred ceEEEEC--CCchHHHHhhccccCCCeEEEeccCCCCCC
Q 014768 5 YDVIVLG--TGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (419)
Q Consensus 5 ~dvvIIG--aGi~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (419)
.+|+||| +|..|+-+|..|++.|.+|+++++.+ +..
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~ 566 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LAN 566 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTH
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccc
Confidence 4799999 99999999999999999999999988 543
No 422
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=91.44 E-value=0.1 Score=47.35 Aligned_cols=35 Identities=14% Similarity=0.263 Sum_probs=30.9
Q ss_pred CcceEEEECCCchHHHHhhccccCCC--eEEEeccCC
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~--~V~vlE~~~ 37 (419)
+..+|+|||+|-.|.+.|..|+..|. +|.++|.+.
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT 41 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 45699999999999999999998884 899999863
No 423
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=91.41 E-value=0.12 Score=45.98 Aligned_cols=34 Identities=15% Similarity=0.188 Sum_probs=31.5
Q ss_pred cceEEEECCCchHHHHhhccccCCC---eEEEeccCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGL---KVLHMDRND 37 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~---~V~vlE~~~ 37 (419)
..+|.|||+|..|.+.|..|+++|+ +|+++++++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 4689999999999999999999999 999999976
No 424
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=91.38 E-value=0.35 Score=46.46 Aligned_cols=41 Identities=24% Similarity=0.370 Sum_probs=36.7
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcc
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGES 43 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~ 43 (419)
++|||+|||||++|++||..|++.|++|+|+||++.+||..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~ 42 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKT 42 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCC
Confidence 57999999999999999999999999999999998555443
No 425
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=91.36 E-value=0.11 Score=47.59 Aligned_cols=33 Identities=27% Similarity=0.269 Sum_probs=31.1
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
.+|.|||.|..|.+.|..|.++|++|+++++++
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999876
No 426
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=91.35 E-value=0.13 Score=45.19 Aligned_cols=34 Identities=26% Similarity=0.400 Sum_probs=30.9
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
..++|||+|-+|.++|..|++.|.+|+|+.|+..
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4799999999999999999999999999988743
No 427
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=91.28 E-value=0.18 Score=49.38 Aligned_cols=57 Identities=14% Similarity=0.071 Sum_probs=41.8
Q ss_pred CcHHHHHHHHHHH-cCcEEEcCCccceEEEcCCC------cEEEEEe----CCe--EEEcCEEEeCCCCC
Q 014768 232 GELPQAFARLSAV-YGGTYMLNKPECKVEFDEEG------KVVGVTS----EGE--TAKCKKVVCDPSYL 288 (419)
Q Consensus 232 ~~l~~al~~~~~~-~G~~i~~~~~V~~I~~~~~~------~v~gV~~----~g~--~i~ad~VV~~~~~~ 288 (419)
..+.++|.+.+++ .|++|+++++|++|..++++ ++.+|.+ +|+ ++.||.||.+++-+
T Consensus 138 ~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~ 207 (540)
T 1chu_A 138 REVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGA 207 (540)
T ss_dssp ----CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCc
Confidence 4677788888888 69999999999999983245 8888765 455 78999998766543
No 428
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=91.24 E-value=0.11 Score=47.18 Aligned_cols=37 Identities=16% Similarity=0.294 Sum_probs=32.7
Q ss_pred CCCcceEEEECCCchHHHHhhccccCCC--eEEEeccCC
Q 014768 1 MDEEYDVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (419)
Q Consensus 1 m~~~~dvvIIGaGi~Gl~aA~~La~~G~--~V~vlE~~~ 37 (419)
|.+..+|+|||+|-.|.+.|..|+..|. ++.++|.+.
T Consensus 2 ~~~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 40 (318)
T 1ez4_A 2 MPNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVK 40 (318)
T ss_dssp BTTBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 5666899999999999999999998886 899999853
No 429
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=91.23 E-value=0.11 Score=45.92 Aligned_cols=33 Identities=18% Similarity=0.104 Sum_probs=30.4
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
..++|+|+|-.|..+|..|++.|.+|+|+.|+.
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 579999999999999999999999999998864
No 430
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=91.19 E-value=0.41 Score=44.33 Aligned_cols=53 Identities=17% Similarity=0.169 Sum_probs=43.1
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 289 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~~ 289 (419)
..+.+.|.+.+++.|++|+++++|++|+. ++ .|++ +|++++||.||.+.+...
T Consensus 107 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~~~~g~~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 107 SHLHDALVNRARALGVDISVNSEAVAADP--VG---RLTLQTGEVLEADLIVGADGVGS 160 (379)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEEETTSCEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEEECCCCEEEcCEEEECCCccH
Confidence 46788888888889999999999999975 34 4555 788999999998776654
No 431
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=91.19 E-value=0.084 Score=53.57 Aligned_cols=33 Identities=24% Similarity=0.285 Sum_probs=31.0
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
.+|.|||+|..|...|..|+++|++|+++|+++
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 469999999999999999999999999999875
No 432
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=91.19 E-value=0.24 Score=47.65 Aligned_cols=37 Identities=22% Similarity=0.360 Sum_probs=33.8
Q ss_pred eEEEECCCchHHHHhhccccCCCeEEEeccCCCCCCcc
Q 014768 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGES 43 (419)
Q Consensus 6 dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~ 43 (419)
||||||||++||+||..|+++|.+|+|+||. ..||..
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s 37 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGST 37 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSG
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchH
Confidence 7999999999999999999999999999999 566553
No 433
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=91.16 E-value=0.48 Score=44.09 Aligned_cols=57 Identities=16% Similarity=0.232 Sum_probs=43.0
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEE--eCCe--EEEcCEEEeCCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVT--SEGE--TAKCKKVVCDPSYLP 289 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~--~~g~--~i~ad~VV~~~~~~~ 289 (419)
..+.+.|.+.+.+.|++|+++++|++|..++++.+ .|+ .+|+ +++||.||.+.+...
T Consensus 103 ~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~-~v~~~~~g~~~~~~a~~vV~AdG~~S 163 (394)
T 1k0i_A 103 TEVTRDLMEAREACGATTVYQAAEVRLHDLQGERP-YVTFERDGERLRLDCDYIAGCDGFHG 163 (394)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSC-EEEEEETTEEEEEECSEEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCce-EEEEecCCcEEEEEeCEEEECCCCCc
Confidence 35777888888888999999999999987322333 344 3777 799999998776543
No 434
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.14 E-value=0.12 Score=47.92 Aligned_cols=33 Identities=24% Similarity=0.258 Sum_probs=30.8
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
..|+|+|+|-.|+.+|..|+..|.+|+++++++
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 579999999999999999999999999999864
No 435
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=91.11 E-value=0.13 Score=45.67 Aligned_cols=31 Identities=23% Similarity=0.296 Sum_probs=29.0
Q ss_pred eEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 6 dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
+|.|||+|..|...|..|++ |++|+++++++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 69999999999999999999 99999999875
No 436
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=91.06 E-value=0.12 Score=49.82 Aligned_cols=33 Identities=18% Similarity=0.201 Sum_probs=30.8
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
.+|.|||+|..|...|..|+++|++|+++++++
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999999864
No 437
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=90.99 E-value=0.08 Score=49.29 Aligned_cols=34 Identities=18% Similarity=0.345 Sum_probs=31.4
Q ss_pred ceEEEECCCchHHHHhhccccCC-------CeEEEeccCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDG-------LKVLHMDRNDY 38 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G-------~~V~vlE~~~~ 38 (419)
.+|.|||+|..|.+.|..|+++| ++|+++++++.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 36999999999999999999999 99999998765
No 438
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=90.99 E-value=0.11 Score=47.05 Aligned_cols=32 Identities=19% Similarity=0.295 Sum_probs=29.9
Q ss_pred eEEEECCCchHHHHhhccccCC--CeEEEeccCC
Q 014768 6 DVIVLGTGLKECILSGLLSVDG--LKVLHMDRND 37 (419)
Q Consensus 6 dvvIIGaGi~Gl~aA~~La~~G--~~V~vlE~~~ 37 (419)
+|.|||+|-.|.+.|..|+++| .+|+++|++.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 7999999999999999999999 7999999964
No 439
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=90.96 E-value=0.16 Score=45.50 Aligned_cols=33 Identities=15% Similarity=0.097 Sum_probs=30.2
Q ss_pred ceEEEECCCchHHHHhhccccCCC-eEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~-~V~vlE~~~ 37 (419)
..|+|||+|-.|..+|..|++.|. +|+|+.|+.
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 579999999999999999999997 999998863
No 440
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=90.86 E-value=0.11 Score=45.78 Aligned_cols=33 Identities=21% Similarity=0.368 Sum_probs=30.3
Q ss_pred ceEEEECCCchHHHHhhccccCCCe-EEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLK-VLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~-V~vlE~~~ 37 (419)
.+|.|||+|..|...|..|++.|++ |.++++++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 5799999999999999999999999 99999864
No 441
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=90.83 E-value=0.13 Score=49.60 Aligned_cols=32 Identities=31% Similarity=0.380 Sum_probs=30.2
Q ss_pred eEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 6 dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
+|.|||+|..|...|..|+++|++|+++++++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999999864
No 442
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=90.81 E-value=0.14 Score=44.43 Aligned_cols=33 Identities=15% Similarity=0.232 Sum_probs=30.7
Q ss_pred ceEEEECCCchHHHHhhccccCCC----eEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGL----KVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~----~V~vlE~~~ 37 (419)
.+|.|||+|..|...|..|+++|+ +|+++++++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 479999999999999999999998 999999974
No 443
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=90.81 E-value=0.095 Score=55.27 Aligned_cols=37 Identities=19% Similarity=0.070 Sum_probs=34.0
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGG 41 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~GG 41 (419)
.+|+|||+|..|+-+|..|++.|.+|+|+|+.+.+..
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~~ 321 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSISA 321 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCCH
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccch
Confidence 4799999999999999999999999999999988753
No 444
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=90.78 E-value=0.17 Score=44.20 Aligned_cols=33 Identities=9% Similarity=0.077 Sum_probs=30.6
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
.+|.|||+|..|...|..|++.|++|.++++++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 479999999999999999999999999999874
No 445
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=90.78 E-value=0.2 Score=48.47 Aligned_cols=49 Identities=18% Similarity=0.158 Sum_probs=40.2
Q ss_pred HHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCCCc
Q 014768 240 RLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 290 (419)
Q Consensus 240 ~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~~~ 290 (419)
+.++++|++|+++++|++|.. ++++.+|.+ +|+++.||.||.+++..|+
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~--~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~ 314 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEG--NEKVERVIDMNNHEYKVDALIFADGRRPD 314 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEEC--SSSCCEEEETTCCEEECSEEEECCCEEEC
T ss_pred HHHHhCCcEEEeCCeeEEEec--CCceEEEEeCCCeEEEeCEEEECCCcCcC
Confidence 667788999999999999985 344556666 7889999999999887664
No 446
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=90.68 E-value=0.15 Score=45.18 Aligned_cols=32 Identities=25% Similarity=0.453 Sum_probs=29.9
Q ss_pred eEEEECCCchHHHHhhccccCCC--eEEEeccCC
Q 014768 6 DVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (419)
Q Consensus 6 dvvIIGaGi~Gl~aA~~La~~G~--~V~vlE~~~ 37 (419)
+|.|||+|..|.+.|..|+++|+ +|+++++++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 69999999999999999999998 999999864
No 447
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=90.58 E-value=0.41 Score=47.56 Aligned_cols=39 Identities=28% Similarity=0.414 Sum_probs=35.2
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCC-CCCC
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND-YYGG 41 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~-~~GG 41 (419)
.++||||||||++|++||..|++.|.+|+|+|+++ .+|+
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~ 59 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVAR 59 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCC
Confidence 46999999999999999999999999999999985 4554
No 448
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=90.56 E-value=0.17 Score=42.80 Aligned_cols=32 Identities=19% Similarity=0.227 Sum_probs=29.5
Q ss_pred eEEEECC-CchHHHHhhccccCCCeEEEeccCC
Q 014768 6 DVIVLGT-GLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 6 dvvIIGa-Gi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
+|+|+|| |..|...+..|.++|++|+++.|++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 5999996 9999999999999999999999874
No 449
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=90.53 E-value=0.15 Score=48.67 Aligned_cols=34 Identities=18% Similarity=0.118 Sum_probs=31.2
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
...|+|+|+|-.|..+|..|+..|.+|++.|+++
T Consensus 265 GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3579999999999999999999999999999864
No 450
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=90.42 E-value=0.6 Score=45.18 Aligned_cols=55 Identities=11% Similarity=0.029 Sum_probs=43.3
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCe---EEEcCEEEeCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGE---TAKCKKVVCDPSYL 288 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~---~i~ad~VV~~~~~~ 288 (419)
..+-+.|.+.+++.|++|+++++|++|..+ ++.++ |++ +++ +++||.||.+.+..
T Consensus 107 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~-~~~v~-v~~~~~~g~~~~~a~~vVgADG~~ 165 (499)
T 2qa2_A 107 STTESVLEEWALGRGAELLRGHTVRALTDE-GDHVV-VEVEGPDGPRSLTTRYVVGCDGGR 165 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCEEEEEEEC-SSCEE-EEEECSSCEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEe-CCEEE-EEEEcCCCcEEEEeCEEEEccCcc
Confidence 457778888888899999999999999985 66664 444 553 79999999776654
No 451
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=90.39 E-value=0.15 Score=48.83 Aligned_cols=33 Identities=18% Similarity=0.188 Sum_probs=30.9
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRN 36 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~ 36 (419)
...|+|||+|-.|...|..|.+.|.+|+|++.+
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 457999999999999999999999999999985
No 452
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=90.32 E-value=0.14 Score=45.87 Aligned_cols=32 Identities=9% Similarity=0.006 Sum_probs=29.9
Q ss_pred eEEEECCCchHHHHhhccccCCC--eEEEeccCC
Q 014768 6 DVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (419)
Q Consensus 6 dvvIIGaGi~Gl~aA~~La~~G~--~V~vlE~~~ 37 (419)
+|.|||+|..|.+.|..|++.|+ +|+++|.++
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 69999999999999999999998 999999865
No 453
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=90.21 E-value=0.19 Score=46.41 Aligned_cols=33 Identities=24% Similarity=0.339 Sum_probs=30.6
Q ss_pred eEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 6 dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
.|+|||||..|..+|..+.+.|++|+++|.++.
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 699999999999999999999999999998764
No 454
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=90.17 E-value=0.17 Score=47.11 Aligned_cols=33 Identities=27% Similarity=0.295 Sum_probs=30.7
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
..|+|||+|..|+.+|..|...|.+|+++++++
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999999864
No 455
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=90.10 E-value=0.16 Score=44.55 Aligned_cols=30 Identities=23% Similarity=0.227 Sum_probs=28.3
Q ss_pred eEEEECCCchHHHHhhccccCCCeEEEecc
Q 014768 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDR 35 (419)
Q Consensus 6 dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~ 35 (419)
+|.|||+|..|...|..|+++|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 689999999999999999999999999876
No 456
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=90.10 E-value=0.14 Score=45.69 Aligned_cols=32 Identities=13% Similarity=0.112 Sum_probs=29.5
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
.+|.|||+|..|...|..|++.|++|++++ ++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 479999999999999999999999999998 54
No 457
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=90.09 E-value=0.3 Score=45.88 Aligned_cols=38 Identities=16% Similarity=0.113 Sum_probs=34.6
Q ss_pred ceEEEECCCchHHHHhhcccc---CCCeEEEeccCCCCCCc
Q 014768 5 YDVIVLGTGLKECILSGLLSV---DGLKVLHMDRNDYYGGE 42 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~---~G~~V~vlE~~~~~GG~ 42 (419)
.||+|||||++||++|..|++ .|++|+|+|+++..++.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~ 42 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFR 42 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceec
Confidence 389999999999999999999 99999999999976544
No 458
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=90.08 E-value=0.21 Score=44.54 Aligned_cols=34 Identities=29% Similarity=0.334 Sum_probs=31.2
Q ss_pred eEEEECC-CchHHHHhhccccCCCeEEEeccCCCC
Q 014768 6 DVIVLGT-GLKECILSGLLSVDGLKVLHMDRNDYY 39 (419)
Q Consensus 6 dvvIIGa-Gi~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (419)
+|+|.|| |..|...+.+|.++|++|+++-|++..
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~ 36 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP 36 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc
Confidence 6999998 999999999999999999999887654
No 459
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=90.08 E-value=0.15 Score=45.22 Aligned_cols=33 Identities=27% Similarity=0.362 Sum_probs=30.5
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
.+++|||+|-.|.+.|..|.+.|.+|++++++.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 579999999999999999999999999999863
No 460
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=90.05 E-value=0.16 Score=46.20 Aligned_cols=37 Identities=16% Similarity=0.133 Sum_probs=32.7
Q ss_pred CCCcceEEEECC-CchHHHHhhccccCCC-------eEEEeccCC
Q 014768 1 MDEEYDVIVLGT-GLKECILSGLLSVDGL-------KVLHMDRND 37 (419)
Q Consensus 1 m~~~~dvvIIGa-Gi~Gl~aA~~La~~G~-------~V~vlE~~~ 37 (419)
|.+..+|+|+|| |..|...+..|.++|+ +|.++|..+
T Consensus 1 m~~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~ 45 (327)
T 1y7t_A 1 MKAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ 45 (327)
T ss_dssp CCCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCC
Confidence 666679999997 9999999999999996 899999753
No 461
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=90.03 E-value=0.15 Score=45.95 Aligned_cols=32 Identities=22% Similarity=0.381 Sum_probs=29.9
Q ss_pred eEEEECCCchHHHHhhccccCCC--eEEEeccCC
Q 014768 6 DVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (419)
Q Consensus 6 dvvIIGaGi~Gl~aA~~La~~G~--~V~vlE~~~ 37 (419)
+|.|||+|..|.+.|..|++.|. +|.++|.++
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 69999999999999999999887 999999976
No 462
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=90.01 E-value=0.17 Score=46.21 Aligned_cols=33 Identities=9% Similarity=0.018 Sum_probs=30.5
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
.+++|+|.|-.|...|..|.+.|+ |+++|+++.
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~ 148 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGSEV-FVLAEDENV 148 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGG
T ss_pred CCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChh
Confidence 479999999999999999999999 999999764
No 463
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=89.99 E-value=0.23 Score=45.17 Aligned_cols=38 Identities=21% Similarity=0.179 Sum_probs=33.1
Q ss_pred CCCcceEEEECC-CchHHHHhhccccCCCeEEEeccCCC
Q 014768 1 MDEEYDVIVLGT-GLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 1 m~~~~dvvIIGa-Gi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
|++...|+|.|| |..|...+..|+++|++|+++.++..
T Consensus 2 M~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 40 (341)
T 3enk_A 2 MSTKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVN 40 (341)
T ss_dssp CCSSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSS
T ss_pred CCCCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCc
Confidence 555568999996 99999999999999999999998654
No 464
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=89.94 E-value=0.17 Score=53.75 Aligned_cols=33 Identities=27% Similarity=0.275 Sum_probs=30.7
Q ss_pred eEEEECCCchHHHHhhccccCCC-eEEEeccCCC
Q 014768 6 DVIVLGTGLKECILSGLLSVDGL-KVLHMDRNDY 38 (419)
Q Consensus 6 dvvIIGaGi~Gl~aA~~La~~G~-~V~vlE~~~~ 38 (419)
+|+|||||..|+-+|..|++.|. +|+++++.+.
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~ 367 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKGF 367 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCG
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecCh
Confidence 79999999999999999999996 9999999873
No 465
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=89.88 E-value=0.63 Score=45.04 Aligned_cols=55 Identities=13% Similarity=0.001 Sum_probs=43.0
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCe---EEEcCEEEeCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGE---TAKCKKVVCDPSYL 288 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~---~i~ad~VV~~~~~~ 288 (419)
..+-+.|.+.+++.|++|+++++|++|..+ ++.++ |++ +++ +++||.||.+.+..
T Consensus 106 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~-~~~v~-v~~~~~~g~~~~~a~~vVgADG~~ 164 (500)
T 2qa1_A 106 SVTETHLEQWATGLGADIRRGHEVLSLTDD-GAGVT-VEVRGPEGKHTLRAAYLVGCDGGR 164 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCEEEEEEEE-TTEEE-EEEEETTEEEEEEESEEEECCCTT
T ss_pred HHHHHHHHHHHHHCCCEEECCcEEEEEEEc-CCeEE-EEEEcCCCCEEEEeCEEEECCCcc
Confidence 357777888888899999999999999984 66554 444 543 79999999776654
No 466
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=89.85 E-value=0.23 Score=44.30 Aligned_cols=32 Identities=16% Similarity=0.284 Sum_probs=29.1
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
..++|+|+|-.|.++|..|++.| +|+++.++.
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 46999999999999999999999 999998863
No 467
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=89.83 E-value=0.19 Score=50.91 Aligned_cols=39 Identities=15% Similarity=0.134 Sum_probs=34.9
Q ss_pred ceEEEEC--CCchHHHHhhccccCCCeEEEeccCCCCCCcc
Q 014768 5 YDVIVLG--TGLKECILSGLLSVDGLKVLHMDRNDYYGGES 43 (419)
Q Consensus 5 ~dvvIIG--aGi~Gl~aA~~La~~G~~V~vlE~~~~~GG~~ 43 (419)
.+|+||| +|..|+-+|..|++.|.+|+++++.+.+....
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~ 564 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWT 564 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGG
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccccc
Confidence 4699999 99999999999999999999999998876543
No 468
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=89.81 E-value=0.47 Score=44.45 Aligned_cols=53 Identities=17% Similarity=0.153 Sum_probs=42.2
Q ss_pred CcHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEeCCCCC
Q 014768 232 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYL 288 (419)
Q Consensus 232 ~~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~-~g~~i~ad~VV~~~~~~ 288 (419)
..+.+.|.+.+++ ++|+++++|++|+.+ ++.+. |++ +|++++||.||.+.+..
T Consensus 127 ~~l~~~L~~~~~~--~~i~~~~~v~~i~~~-~~~v~-v~~~~g~~~~a~~vV~AdG~~ 180 (407)
T 3rp8_A 127 AELQREMLDYWGR--DSVQFGKRVTRCEED-ADGVT-VWFTDGSSASGDLLIAADGSH 180 (407)
T ss_dssp HHHHHHHHHHHCG--GGEEESCCEEEEEEE-TTEEE-EEETTSCEEEESEEEECCCTT
T ss_pred HHHHHHHHHhCCc--CEEEECCEEEEEEec-CCcEE-EEEcCCCEEeeCEEEECCCcC
Confidence 4577778887766 899999999999984 66654 555 88899999999877665
No 469
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=89.31 E-value=0.062 Score=45.21 Aligned_cols=34 Identities=26% Similarity=0.123 Sum_probs=30.9
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
.+|.|||+|-.|...|..|.+.|++|++++++..
T Consensus 20 ~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~ 53 (201)
T 2yjz_A 20 GVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ 53 (201)
Confidence 4699999999999999999999999999988654
No 470
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=89.75 E-value=0.19 Score=46.02 Aligned_cols=33 Identities=21% Similarity=0.182 Sum_probs=30.7
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
..|.|||+|..|.+.|..|++.|++|+++++++
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 469999999999999999999999999999875
No 471
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=89.75 E-value=0.2 Score=43.01 Aligned_cols=34 Identities=29% Similarity=0.362 Sum_probs=30.9
Q ss_pred cceEEEECC-CchHHHHhhccccCCCeEEEeccCC
Q 014768 4 EYDVIVLGT-GLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 4 ~~dvvIIGa-Gi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
...|+|.|| |..|...+..|+++|++|+++.+++
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 357999998 9999999999999999999999864
No 472
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=89.72 E-value=0.21 Score=42.36 Aligned_cols=32 Identities=25% Similarity=0.346 Sum_probs=29.5
Q ss_pred eEEEECC-CchHHHHhhccccCCCeEEEeccCC
Q 014768 6 DVIVLGT-GLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 6 dvvIIGa-Gi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
+|+|.|| |..|...+..|.++|++|+++.|++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 5999998 9999999999999999999998863
No 473
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=89.71 E-value=0.77 Score=42.38 Aligned_cols=55 Identities=25% Similarity=0.378 Sum_probs=44.3
Q ss_pred cHHHHHHHHHHHcCcEEEcCCccceEEEcCCCcEEEEEe--CCe--EEEcCEEEeCCCCC
Q 014768 233 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS--EGE--TAKCKKVVCDPSYL 288 (419)
Q Consensus 233 ~l~~al~~~~~~~G~~i~~~~~V~~I~~~~~~~v~gV~~--~g~--~i~ad~VV~~~~~~ 288 (419)
.+-+.|.+.+++.|++++++++|+.+.. ++++++++.. +++ +++||.||.+.+..
T Consensus 103 ~~~~~L~~~a~~~G~~~~~~~~v~~~~~-~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~ 161 (397)
T 3oz2_A 103 KFDKHLAALAAKAGADVWVKSPALGVIK-ENGKVAGAKIRHNNEIVDVRAKMVIAADGFE 161 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEE-ETTEEEEEEEEETTEEEEEEEEEEEECCCTT
T ss_pred HHHHHHHHHHHhcCcEEeeeeeeeeeee-ccceeeeeeecccccceEEEEeEEEeCCccc
Confidence 4667788888899999999999999998 4888887765 443 68899999776654
No 474
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=89.69 E-value=0.16 Score=45.62 Aligned_cols=34 Identities=18% Similarity=0.296 Sum_probs=30.1
Q ss_pred ceEEEECCCchHHHHhhccccCCC--eEEEeccCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGL--KVLHMDRNDY 38 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~--~V~vlE~~~~ 38 (419)
.+|.|||||..|...|..|+.+|+ +|.++|.+..
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~ 50 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSEG 50 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC--
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcc
Confidence 579999999999999999999998 9999999864
No 475
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=89.64 E-value=0.21 Score=48.37 Aligned_cols=33 Identities=15% Similarity=0.217 Sum_probs=30.1
Q ss_pred ceEEEECCCchHHH-HhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECI-LSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~-aA~~La~~G~~V~vlE~~~ 37 (419)
.+|.|||.|-+|++ +|..|.+.|++|++.|.+.
T Consensus 23 ~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~ 56 (494)
T 4hv4_A 23 RHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAP 56 (494)
T ss_dssp CEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCC
Confidence 57999999999997 6999999999999999864
No 476
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=89.53 E-value=0.17 Score=44.79 Aligned_cols=33 Identities=15% Similarity=0.051 Sum_probs=30.3
Q ss_pred ceEEEECCCchHHHHhhccccCCC-eEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~-~V~vlE~~~ 37 (419)
..++|||+|-+|.++|..|++.|. +|+|+.|+.
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 579999999999999999999998 999998875
No 477
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=89.52 E-value=0.19 Score=45.64 Aligned_cols=33 Identities=15% Similarity=0.106 Sum_probs=30.3
Q ss_pred ceEEEECCCchHHHHhhccccCCC--eEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~--~V~vlE~~~ 37 (419)
.+|.|||+|..|.++|..|+..|. +|.++|.+.
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 589999999999999999999997 999999854
No 478
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=89.52 E-value=0.22 Score=44.79 Aligned_cols=35 Identities=20% Similarity=0.266 Sum_probs=31.9
Q ss_pred cceEEEECC-CchHHHHhhccccCCCeEEEeccCCC
Q 014768 4 EYDVIVLGT-GLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 4 ~~dvvIIGa-Gi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
...|+|.|| |..|...+..|.++|++|+++.++..
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 457999999 99999999999999999999998765
No 479
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=89.43 E-value=0.6 Score=46.77 Aligned_cols=36 Identities=25% Similarity=0.433 Sum_probs=33.4
Q ss_pred cceEEEECCCchHHHHhhccc---c-CCCeEEEeccCCCC
Q 014768 4 EYDVIVLGTGLKECILSGLLS---V-DGLKVLHMDRNDYY 39 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La---~-~G~~V~vlE~~~~~ 39 (419)
++||||||||++||+||..|+ + +|.+|+||||.+..
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~ 61 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVE 61 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCC
Confidence 489999999999999999999 6 89999999999864
No 480
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=89.39 E-value=0.25 Score=44.20 Aligned_cols=38 Identities=13% Similarity=0.156 Sum_probs=32.0
Q ss_pred CCCcceEEEECC-CchHHHHhhccccCCCeEEEeccCCC
Q 014768 1 MDEEYDVIVLGT-GLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 1 m~~~~dvvIIGa-Gi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
|.+...|+|+|| |.-|...+..|.++|++|+++.|+..
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 39 (308)
T 1qyc_A 1 MGSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVREST 39 (308)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCC
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcc
Confidence 543457999997 99999999999999999999998753
No 481
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=89.38 E-value=0.24 Score=44.49 Aligned_cols=33 Identities=24% Similarity=0.255 Sum_probs=30.8
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
..|.|||+|-.|..+|..|...|.+|++++++.
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 579999999999999999999999999999864
No 482
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=89.37 E-value=0.21 Score=45.26 Aligned_cols=34 Identities=24% Similarity=0.413 Sum_probs=30.2
Q ss_pred cceEEEECCCchHHHHhhccccCCC--eEEEeccCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGL--KVLHMDRND 37 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~--~V~vlE~~~ 37 (419)
..+|+|||+|..|.+.|..|+..|. +|.++|.+.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 3689999999999999999998885 899999864
No 483
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=89.26 E-value=0.29 Score=43.48 Aligned_cols=33 Identities=15% Similarity=0.210 Sum_probs=29.6
Q ss_pred cceEEEECCC-chHHHHhhccccCCCeEEEeccC
Q 014768 4 EYDVIVLGTG-LKECILSGLLSVDGLKVLHMDRN 36 (419)
Q Consensus 4 ~~dvvIIGaG-i~Gl~aA~~La~~G~~V~vlE~~ 36 (419)
..+|+|||+| +.|.-+|..|.+.|..|+++.++
T Consensus 165 gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 198 (301)
T 1a4i_A 165 GRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSK 198 (301)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCeEEEEECC
Confidence 3589999999 68999999999999999999753
No 484
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=89.22 E-value=0.15 Score=47.27 Aligned_cols=39 Identities=26% Similarity=0.393 Sum_probs=34.5
Q ss_pred cceEEEECC-CchHHHHhhccccCCC---eEEEeccCC-CCCCc
Q 014768 4 EYDVIVLGT-GLKECILSGLLSVDGL---KVLHMDRND-YYGGE 42 (419)
Q Consensus 4 ~~dvvIIGa-Gi~Gl~aA~~La~~G~---~V~vlE~~~-~~GG~ 42 (419)
..+|+|||+ |..|+.|+..+..-|. +|+++|.+. .-||+
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~~~~g~~ 257 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKETSRGGP 257 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHHHTTCSC
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccccccCCc
Confidence 358999999 9999999999999997 999999987 55665
No 485
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=89.14 E-value=0.25 Score=44.12 Aligned_cols=34 Identities=26% Similarity=0.226 Sum_probs=31.2
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
...|.|||+|-.|..+|..|...|.+|++++++.
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3579999999999999999999999999999864
No 486
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=89.01 E-value=0.35 Score=42.63 Aligned_cols=33 Identities=18% Similarity=0.197 Sum_probs=29.4
Q ss_pred cceEEEECCC-chHHHHhhccccCCCeEEEeccC
Q 014768 4 EYDVIVLGTG-LKECILSGLLSVDGLKVLHMDRN 36 (419)
Q Consensus 4 ~~dvvIIGaG-i~Gl~aA~~La~~G~~V~vlE~~ 36 (419)
..+|+|||+| +.|.-+|..|.+.|..|+++.+.
T Consensus 159 gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~ 192 (288)
T 1b0a_A 159 GLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRF 192 (288)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSS
T ss_pred CCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 3689999999 67999999999999999999754
No 487
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=88.97 E-value=0.28 Score=44.56 Aligned_cols=33 Identities=15% Similarity=0.180 Sum_probs=30.2
Q ss_pred cceEEEECCCchHHHHhhccccCCC--eEEEeccC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGL--KVLHMDRN 36 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~--~V~vlE~~ 36 (419)
..+|.|||+|..|.++|..|+.+|. +|.++|.+
T Consensus 19 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 19 QNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 3689999999999999999999997 89999985
No 488
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=88.94 E-value=0.28 Score=43.95 Aligned_cols=38 Identities=18% Similarity=0.197 Sum_probs=32.0
Q ss_pred CCCcceEEEECC-CchHHHHhhccccCCCeEEEeccCCC
Q 014768 1 MDEEYDVIVLGT-GLKECILSGLLSVDGLKVLHMDRNDY 38 (419)
Q Consensus 1 m~~~~dvvIIGa-Gi~Gl~aA~~La~~G~~V~vlE~~~~ 38 (419)
|.+...|+|+|| |..|...+..|.++|++|+++.|+..
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 39 (313)
T 1qyd_A 1 MDKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEV 39 (313)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCC
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCc
Confidence 544457999996 99999999999999999999999753
No 489
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=88.93 E-value=0.32 Score=43.14 Aligned_cols=33 Identities=18% Similarity=0.252 Sum_probs=29.3
Q ss_pred cceEEEECC-CchHHHHhhccccCCCeEEEeccC
Q 014768 4 EYDVIVLGT-GLKECILSGLLSVDGLKVLHMDRN 36 (419)
Q Consensus 4 ~~dvvIIGa-Gi~Gl~aA~~La~~G~~V~vlE~~ 36 (419)
..+++|||. |+.|..+|..|.+.|..|+++.++
T Consensus 165 Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~ 198 (300)
T 4a26_A 165 GKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG 198 (300)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 358999995 579999999999999999999874
No 490
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=88.82 E-value=0.3 Score=46.63 Aligned_cols=34 Identities=26% Similarity=0.313 Sum_probs=30.7
Q ss_pred cceEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 4 EYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 4 ~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
...|+|+|+|-.|...|..|++.|++|++++++.
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~ 36 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTL 36 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCH
Confidence 3579999999999999999999999999998863
No 491
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=88.78 E-value=0.2 Score=44.58 Aligned_cols=33 Identities=24% Similarity=0.339 Sum_probs=29.7
Q ss_pred ceEEEECCCchHHHHhhccccC--CCeEEEeccCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVD--GLKVLHMDRND 37 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~--G~~V~vlE~~~ 37 (419)
.+|.|||+|..|.+.|..|+++ |++|+++++++
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 5799999999999999999987 68999999864
No 492
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=88.78 E-value=0.24 Score=43.42 Aligned_cols=32 Identities=28% Similarity=0.325 Sum_probs=29.9
Q ss_pred eEEEECCCchHHHHhhccccCCCeEEEeccCC
Q 014768 6 DVIVLGTGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 6 dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
+++|||+|-.|...|..|.+.|.+|++++++.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999999864
No 493
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=88.77 E-value=0.47 Score=45.68 Aligned_cols=43 Identities=26% Similarity=0.374 Sum_probs=37.1
Q ss_pred CcceEEEECCCchHHHHhhccccCCCeEEEeccCC---------CCCCcccc
Q 014768 3 EEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRND---------YYGGESSS 45 (419)
Q Consensus 3 ~~~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~---------~~GG~~~t 45 (419)
.++||+|||||++|++||..|++.|++|+|+||+. .+||.|..
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~ 59 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVN 59 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecc
Confidence 46999999999999999999999999999999521 37887753
No 494
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=88.74 E-value=0.24 Score=48.89 Aligned_cols=35 Identities=17% Similarity=0.364 Sum_probs=32.6
Q ss_pred ceEEEECCCchHHHHhhccccCCCeEEEeccCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYY 39 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~G~~V~vlE~~~~~ 39 (419)
.+++|||+|-.|...|..|.+.|++|+++|+++..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHH
Confidence 47999999999999999999999999999998763
No 495
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=88.72 E-value=0.27 Score=47.09 Aligned_cols=35 Identities=23% Similarity=0.333 Sum_probs=30.2
Q ss_pred ceEEEECCCchHHHHhhccccC--------------------C-CeEEEeccCCCC
Q 014768 5 YDVIVLGTGLKECILSGLLSVD--------------------G-LKVLHMDRNDYY 39 (419)
Q Consensus 5 ~dvvIIGaGi~Gl~aA~~La~~--------------------G-~~V~vlE~~~~~ 39 (419)
.+|+|||+|..|+-+|..|++. | .+|+|+++++..
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 203 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChh
Confidence 4799999999999999999874 6 499999997654
No 496
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=88.71 E-value=0.26 Score=42.96 Aligned_cols=32 Identities=22% Similarity=0.249 Sum_probs=29.7
Q ss_pred eEEEECCCchHHHHhhccccCCC-eEEEeccCC
Q 014768 6 DVIVLGTGLKECILSGLLSVDGL-KVLHMDRND 37 (419)
Q Consensus 6 dvvIIGaGi~Gl~aA~~La~~G~-~V~vlE~~~ 37 (419)
.++|||+|-+|-+++..|.+.|. +|+|+.|+.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 79999999999999999999998 999999864
No 497
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=88.70 E-value=0.35 Score=42.37 Aligned_cols=33 Identities=18% Similarity=0.101 Sum_probs=29.3
Q ss_pred cceEEEECCC-chHHHHhhccccCCCeEEEeccC
Q 014768 4 EYDVIVLGTG-LKECILSGLLSVDGLKVLHMDRN 36 (419)
Q Consensus 4 ~~dvvIIGaG-i~Gl~aA~~La~~G~~V~vlE~~ 36 (419)
..+++|||+| +.|..+|..|.+.|..|+++.++
T Consensus 150 Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~ 183 (276)
T 3ngx_A 150 ENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK 183 (276)
T ss_dssp SCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence 3589999976 79999999999999999999863
No 498
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=88.68 E-value=0.28 Score=44.85 Aligned_cols=35 Identities=14% Similarity=0.201 Sum_probs=30.4
Q ss_pred CcceEEEECC-CchHHHHhhccccCCC--eEEEeccCC
Q 014768 3 EEYDVIVLGT-GLKECILSGLLSVDGL--KVLHMDRND 37 (419)
Q Consensus 3 ~~~dvvIIGa-Gi~Gl~aA~~La~~G~--~V~vlE~~~ 37 (419)
...+|+|||+ |-.|.++|+.|+..|. +|+++|.+.
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 3468999998 9999999999999884 899999853
No 499
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=88.66 E-value=0.29 Score=41.34 Aligned_cols=32 Identities=22% Similarity=0.246 Sum_probs=29.6
Q ss_pred eEEEEC-CCchHHHHhhccccCCCeEEEeccCC
Q 014768 6 DVIVLG-TGLKECILSGLLSVDGLKVLHMDRND 37 (419)
Q Consensus 6 dvvIIG-aGi~Gl~aA~~La~~G~~V~vlE~~~ 37 (419)
+|+|.| +|..|...+..|.++|++|+++.|++
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSG
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence 699999 59999999999999999999999975
No 500
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=88.65 E-value=0.31 Score=44.02 Aligned_cols=32 Identities=31% Similarity=0.210 Sum_probs=29.8
Q ss_pred eEEEECC-CchHHHHhhccccCC--CeEEEeccCC
Q 014768 6 DVIVLGT-GLKECILSGLLSVDG--LKVLHMDRND 37 (419)
Q Consensus 6 dvvIIGa-Gi~Gl~aA~~La~~G--~~V~vlE~~~ 37 (419)
+|+|||| |-.|.+.|..|++.| .+|.++|.+.
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 7999998 999999999999998 6999999976
Done!